RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VIPR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000106018

Ensembl transcript IDs: ENST00000262178.7, ENST00000377633.7, ENST00000402066.5, ENST00000421760.2

Found 395 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCCCGACACGGTaGTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAG +
Preference number: 1 (lower is better)
Translates to: NQLDGVRTALTCPTR*SGIWKEEAGVSAPQ
Trigger: CTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
3UTR CCA 90 bp AACAGCCCTGTGGAGTTGGGTGGGGCAGGGCTCAGCCGGGCCGGGTaGGCGCCCCAAGAGAGAGGACGGGCTGCCCTCCTGTTGATTTCT +
Preference number: 1 (lower is better)
Translates to: NSPVELGGAGLSRAG*APQERGRAALLLIS
Trigger: AGAAATCAACAGGAGGGCAGCCCGTCCTCTCTCTTGGGGCGCCCACCCGGCCCGGCTGAGCCCTGCCCCACCCAACTCCACAGGGCTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR TCA 90 bp TCCCACAGGGCGGCAGGTGACCTCCTGAGGCAGAGCCAGAGCTGCTaGGGGTCCCACGGAACACCTGTGTGGAGAGGTCCCCTCCTTCAT +
Preference number: 1 (lower is better)
Translates to: SHRAAGDLLRQSQSC*GSHGTPVWRGPLLH
Trigger: ATGAAGGAGGGGACCTCTCCACACAGGTGTTCCGTGGGACCCTCAGCAGCTCTGGCTCTGCCTCAGGAGGTCACCTGCCGCCCTGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR GCA 90 bp GGTTTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTaGCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTC +
Preference number: 1 (lower is better)
Translates to: GLVDNQLDGVRTALT*PTRCSGIWKEEAGV
Trigger: GACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
3UTR GCA 90 bp CGCCCTGATGTGGGACGGATGTCACCCGGTGGTCGCCCAGGCTCGTaGTGGGCCACACAACTGCGTTTCCACATTTCCTCCTTGGCTCCC +
Preference number: 1 (lower is better)
Translates to: RPDVGRMSPGGRPGS*WATQLRFHISSLAP
Trigger: GGGAGCCAAGGAGGAAATGTGGAAACGCAGTTGTGTGGCCCAGCACGAGCCTGGGCGACCACCGGGTGACATCCGTCCCACATCAGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CCA 90 bp CCTGACTGGCTTCCCTCTGTCCTGCAGATGAGGGGGCTACCCTTATaGGACCTGGGAGGCCGCCCTGATGTGGGACGGATGTCACCCGGT +
Preference number: 1 (lower is better)
Translates to: PDWLPSVLQMRGLPL*DLGGRPDVGRMSPG
Trigger: ACCGGGTGACATCCGTCCCACATCAGGGCGGCCTCCCAGGTCCCATAAGGGTAGCCCCCTCATCTGCAGGACAGAGGGAAGCCAGTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR TCA 90 bp ACACTGGGGAGGAGACCAGGTTCACAGAGGGGAGGAAACACACTCTaGCCACAGGACGGAGTGCGGGAGCCAGCCGAGCAGTCGGGCTTC +
Preference number: 1 (lower is better)
Translates to: TLGRRPGSQRGGNTL*PQDGVREPAEQSGF
Trigger: GAAGCCCGACTGCTCGGCTGGCTCCCGCACTCCGTCCTGTGGTCAGAGTGTGTTTCCTCCCCTCTGTGAACCTGGTCTCCTCCCCAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421760.2
3UTR CCA 90 bp CTGAGGTCCATCGAGCGCTGTGGGGGCCAGGGCTTGGCACACACATaGAGACTGTGCCCTGATATCCCCACCCTTCTGCAGCTGGCTCAG +
Preference number: 1 (lower is better)
Translates to: LRSIERCGGQGLAHT*RLCPDIPTLLQLAQ
Trigger: CTGAGCCAGCTGCAGAAGGGTGGGGATATCAGGGCACAGTCTCCATGTGTGTGCCAAGCCCTGGCCCCCACAGCGCTCGATGGACCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CCA 90 bp TGTGGCCGGCGTGGCCCAGGGTGTGCAGGACAGGGTGCGGACCTTTaGGGATTGAGGGGTCTCTGGACACTGCTGCTTTGCTGTCCTAAC +
Preference number: 1 (lower is better)
Translates to: CGRRGPGCAGQGADL*GLRGLWTLLLCCPN
Trigger: GTTAGGACAGCAAAGCAGCAGTGTCCAGAGACCCCTCAATCCCCAAAGGTCCGCACCCTGTCCTGCACACCCTGGGCCACGCCGGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR TCA 90 bp TCTCCCCAAACCAACCTCGGGTTCATTCTCCCAGAAGTCCAGGGATaGGCTTGTTGCAGCAGAGGGGTGTGGCCGGCGTGGCCCAGGGTG +
Preference number: 1 (lower is better)
Translates to: SPQTNLGFILPEVQG*ACCSRGVWPAWPRV
Trigger: CACCCTGGGCCACGCCGGCCACACCCCTCTGCTGCAACAAGCTCATCCCTGGACTTCTGGGAGAATGAACCCGAGGTTGGTTTGGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR GCA 90 bp GCAAACCAAGGTGACACTGACAGGATGTGTGAGCTTCCCTGTGGCTaGCTCCCGGCACAGCTGTCCCGACCTTTGACATCGCGCCCCAGC +
Preference number: 1 (lower is better)
Translates to: ANQGDTDRMCELPCG*LPAQLSRPLTSRPS
Trigger: GCTGGGGCGCGATGTCAAAGGTCGGGACAGCTGTGCCGGGAGGCAGCCACAGGGAAGCTCACACATCCTGTCAGTGTCACCTTGGTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CCA 90 bp CCTGATGTGGGACGGATGTCACCCGGTGGTCGCCCAGGCTCGTGCTaGGCCACACAACTGCGTTTCCACATTTCCTCCTTGGCTCCCCTA +
Preference number: 1 (lower is better)
Translates to: PDVGRMSPGGRPGSC*ATQLRFHISSLAPL
Trigger: TAGGGGAGCCAAGGAGGAAATGTGGAAACGCAGTTGTGTGGCCCAGCACGAGCCTGGGCGACCACCGGGTGACATCCGTCCCACATCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR TCA 90 bp CTGAGGGTCCCACGGAACACCTGTGTGGAGAGGTCCCCTCCTTCATaGCCTTGCTCTCCTGATCTGGTTGTCTCCTCAGCCCGCCTTCCG +
Preference number: 1 (lower is better)
Translates to: LRVPRNTCVERSPPS*PCSPDLVVSSARLP
Trigger: CGGAAGGCGGGCTGAGGAGACAACCAGATCAGGAGAGCAAGGTCATGAAGGAGGGGACCTCTCCACACAGGTGTTCCGTGGGACCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR TCA 90 bp CACACCCAACCACCGACCATCAACAACCAGTGCCTGGTAACCACCTaGCACGTCCACTCACGCCCACTTCCTCAGCGTCCCCTCTGGGTC +
Preference number: 1 (lower is better)
Translates to: HTQPPTINNQCLVTT*HVHSRPLPQRPLWV
Trigger: GACCCAGAGGGGACGCTGAGGAAGTGGGCGTGAGTGGACGTGTCAGGTGGTTACCAGGCACTGGTTGTTGATGGTCGGTGGTTGGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR TCA 90 bp AACACGACTCCAATTCCAGGTATGGGGTTTAGTGGACAACCAGCTTaGCGGAGTCAGGACCGCGCTGACCTGCCCGACACGGTGCTCGGG +
Preference number: 1 (lower is better)
Translates to: NTTPIPGMGFSGQPA*RSQDRADLPDTVLG
Trigger: CCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAAACCCCATACCTGGAATTGGAGTCGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR TCA 90 bp GCTCATTCCCGCCACGTGGAGGAGTCTGCGACATTCCACACACAATaGCAGTTAAAGACACCTGCTGACCACTGGGTCCTGCTTCCCCTG +
Preference number: 1 (lower is better)
Translates to: AHSRHVEESATFHTQ*QLKTPADHWVLLPL
Trigger: CAGGGGAAGCAGGACCCAGTGGTCAGCAGGTGTCTTTAACTGTCATTGTGTGTGGAATGTCGCAGACTCCTCCACGTGGCGGGAATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR TCA 90 bp GGAGTCTGCGACATTCCACACACAATGACAGTTAAAGACACCTGCTaGCCACTGGGTCCTGCTTCCCCTGCTCACCAGGCATCTGTCAGG +
Preference number: 1 (lower is better)
Translates to: GVCDIPHTMTVKDTC*PLGPASPAHQASVR
Trigger: CCTGACAGATGCCTGGTGAGCAGGGGAAGCAGGACCCAGTGGTCAGCAGGTGTCTTTAACTGTCATTGTGTGTGGAATGTCGCAGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR GCA 90 bp CTGGGTCACTGCCCTTTCCCTAGAAGGTCCCTTGCCATCTCAGACTaGATGGGACTTGCTTTATCACCAGTGTATACCACACACGAGGCT +
Preference number: 1 (lower is better)
Translates to: LGHCPFPRRSLAISD*MGLALSPVYTTHEA
Trigger: AGCCTCGTGTGTGGTATACACTGGTGATAAAGCAAGTCCCATGCAGTCTGAGATGGCAAGGGACCTTCTAGGGAAAGGGCAGTGACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421760.2
3UTR TCA 90 bp TCAGCGTCCCCTCTGGGTCACAGCTCAGTGTCGGCACCTGGCCACTaGCCCAACACCTTCAGTTACCACAAATCTTTGTTTCCTCAAAAA +
Preference number: 1 (lower is better)
Translates to: SASPLGHSSVSAPGH*PNTFSYHKSLFPQK
Trigger: TTTTTGAGGAAACAAAGATTTGTGGTAACTGAAGGTGTTGGGTCAGTGGCCAGGTGCCGACACTGAGCTGTGACCCAGAGGGGACGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CCA 90 bp GTCACTGCCCTTTCCCTAGAAGGTCCCTTGCCATCTCAGACTGCATaGGACTTGCTTTATCACCAGTGTATACCACACACGAGGCTTCCT +
Preference number: 1 (lower is better)
Translates to: VTALSLEGPLPSQTA*DLLYHQCIPHTRLP
Trigger: AGGAAGCCTCGTGTGTGGTATACACTGGTGATAAAGCAAGTCCCATGCAGTCTGAGATGGCAAGGGACCTTCTAGGGAAAGGGCAGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421760.2
3UTR CCA 90 bp CCTTCGCCTGAAGGAGCAGCCGCTAGGGCTGCTGAGCGCCAGCTCTaGGGAGGAGGGCTTGAAACAGTTTTATATGTTGTTAAAATAATT +
Preference number: 1 (lower is better)
Translates to: PSPEGAAARAAERQL*GGGLETVLYVVKII
Trigger: AATTATTTTAACAACATATAAAACTGTTTCAAGCCCTCCTCCCCAGAGCTGGCGCTCAGCAGCCCTAGCGGCTGCTCCTTCAGGCGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR-3UTR CCA 90 bp AGTCAGGACCGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGAAGCCCCGAACCGTaGGCCTCCCGCCGCGTCCGA +
Preference number: 2 (lower is better)
Translates to: SQDRADLPDTVLGHLEGGRSPEP*ASRRVR
Trigger: TCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCT...TCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
3UTR-3UTR GCA 90 bp TCGAGCGCTGTGGGGGCCAGGGCTTGGCACACACATGGAGACTGTGCCCTGATAAGGACCGCGCTGACCTaGCCGACACGGTGCTCGGGC +
Preference number: 2 (lower is better)
Translates to: SSAVGARAWHTHGDCALIRTALT*PTRCSG
Trigger: GCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCT...TATCAGGGCACAGTCTCCATGTGTGTGCCAAGCCCTGGCCCCCACAGCGCTCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR-3UTR TCA 90 bp CAGGCATCTGTCAGGAAACAGCCGGCCCCTCTACCAGGAGAAACCAGTCAGCTCGCCGAGGGGCCGCACTaGACCTGGGGTCTGCAGCGT +
Preference number: 2 (lower is better)
Translates to: QASVRKQPAPLPGETSQLAEGPH*TWGLQR
Trigger: ACGCTGCAGACCCCAGGTTCAGTGCGGCCCCTCGGC...GAGCTGACTGGTTTCTCCTGGTAGAGGGGCCGGCTGTTTCCTGACAGATGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR-3UTR CCA 90 bp GTATGGGGTTTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCAGAAGCCCCGAACCGTaGGCCTCCCGCCGCGTCCGA +
Preference number: 2 (lower is better)
Translates to: VWGLVDNQLDGVRTALTCRSPEP*ASRRVR
Trigger: TCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCT...GCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAAACCCCATAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
3UTR-3UTR CCA 90 bp CAGGCATCTGTCAGGAAACAGCCGGCCCCTCTACCAGGAGAAACCAGTCAGCTCCCCTGTGGAGTTGGGTaGGGCAGGGCTCAGCCGGGC +
Preference number: 2 (lower is better)
Translates to: QASVRKQPAPLPGETSQLPCGVG*GRAQPG
Trigger: GCCCGGCTGAGCCCTGCCCCACCCAACTCCACAGGG...GAGCTGACTGGTTTCTCCTGGTAGAGGGGCCGGCTGTTTCCTGACAGATGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CAA 90 bp CTGGGCAGCTTGCTGAGGTCCATCGAGCGCTGTGGGGGCCAGGGCTaGGCACACACATGGAGACTGTGCCCTGATATCCCCACCCTTCTG +
Preference number: 2 (lower is better)
Translates to: LGSLLRSIERCGGQG*AHTWRLCPDIPTLL
Trigger: CAGAAGGGTGGGGATATCAGGGCACAGTCTCCATGTGTGTGCCAAGCCCTGGCCCCCACAGCGCTCGATGGACCTCAGCAAGCTGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CAA 90 bp AACCAACCTCGGGTTCATTCTCCCAGAAGTCCAGGGATGAGCTTGTaGCAGCAGAGGGGTGTGGCCGGCGTGGCCCAGGGTGTGCAGGAC +
Preference number: 2 (lower is better)
Translates to: NQPRVHSPRSPGMSL*QQRGVAGVAQGVQD
Trigger: GTCCTGCACACCCTGGGCCACGCCGGCCACACCCCTCTGCTGCAACAAGCTCATCCCTGGACTTCTGGGAGAATGAACCCGAGGTTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR-3UTR CCA 90 bp CCCCTGCTCACCAGGCATCTGTCAGGAAACAGCCGGCCCCTCTACCAGGAGAAAGCTCCCCTATTCTCTTaGGCCGGGCGCAGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: PLLTRHLSGNSRPLYQEKAPLFS*AGRSGS
Trigger: TGAGCCACTGCGCCCGGCCCAAGAGAATAGGGGAGC...TTTCTCCTGGTAGAGGGGCCGGCTGTTTCCTGACAGATGCCTGGTGAGCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR-3UTR CCA 90 bp CAGGCATCTGTCAGGAAACAGCCGGCCCCTCTACCAGGAGAAACCAGTCAGCTCCCTTTCCTGGGCACCTaGCCTGGGCCGTTTACTCCC +
Preference number: 2 (lower is better)
Translates to: QASVRKQPAPLPGETSQLPFLGT*PGPFTP
Trigger: GGGAGTAAACGGCCCAGGCCAGGTGCCCAGGAAAGG...GAGCTGACTGGTTTCTCCTGGTAGAGGGGCCGGCTGTTTCCTGACAGATGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR-3UTR TCA 90 bp CAGGCATCTGTCAGGAAACAGCCGGCCCCTCTACCAGGAGAAACCAGTCAGCTCCGGACCTTTGGGGATTaGGGGGTCTCTGGACACTGC +
Preference number: 2 (lower is better)
Translates to: QASVRKQPAPLPGETSQLRTFGD*GVSGHC
Trigger: GCAGTGTCCAGAGACCCCTCAATCCCCAAAGGTCCG...GAGCTGACTGGTTTCTCCTGGTAGAGGGGCCGGCTGTTTCCTGACAGATGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR-3UTR GCA 90 bp ACTGGGTCCTGCTTCCCCTGCTCACCAGGCATCTGTCAGGAAACAGCCGGCCCCGCTGGGCCACACAACTaGGTTTCCACATTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: TGSCFPCSPGICQETAGPAGPHN*VSTFPP
Trigger: AGGAGGAAATGTGGAAACGCAGTTGTGTGGCCCAGC...GGGGCCGGCTGTTTCCTGACAGATGCCTGGTGAGCAGGGGAAGCAGGACCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR-3UTR CCA 90 bp CTCTGGGTCACAGCTCAGTGTCGGCACCTGGCCACTGACCCAACACCTTCAGTTGCTGAGCGCCAGCTCTaGGGAGGAGGGCTTGAAACA +
Preference number: 2 (lower is better)
Translates to: LWVTAQCRHLATDPTPSVAERQL*GGGLET
Trigger: TGTTTCAAGCCCTCCTCCCCAGAGCTGGCGCTCAGC...AACTGAAGGTGTTGGGTCAGTGGCCAGGTGCCGACACTGAGCTGTGACCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR-3UTR CCA 90 bp CAGGCATCTGTCAGGAAACAGCCGGCCCCTCTACCAGGAGAAACCAGTCAGCTCCCACCCTTCTGCAGCTaGCTCAGCAACGTCCCCAGA +
Preference number: 2 (lower is better)
Translates to: QASVRKQPAPLPGETSQLPPFCS*LSNVPR
Trigger: TCTGGGGACGTTGCTGAGCCAGCTGCAGAAGGGTGG...GAGCTGACTGGTTTCTCCTGGTAGAGGGGCCGGCTGTTTCCTGACAGATGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR-3UTR CCA 90 bp CAGGCATCTGTCAGGAAACAGCCGGCCCCTCTACCAGGAGAAACCAGTCAGCTCGGGCAAGGCTGGGGGTaGGTCTGTCCAAACCCTACA +
Preference number: 2 (lower is better)
Translates to: QASVRKQPAPLPGETSQLGQGWG*VCPNPT
Trigger: TGTAGGGTTTGGACAGACCCACCCCCAGCCTTGCCC...GAGCTGACTGGTTTCTCCTGGTAGAGGGGCCGGCTGTTTCCTGACAGATGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CAA 90 bp GTATCCGTCTGTGATGGATCCTCTGCGGCCCCCAGAAATGGTGGGTaGTTCTGTAGATCCGACCGCCTCACCTGTCTCCCCAAACCAACC +
Preference number: 2 (lower is better)
Translates to: VSVCDGSSAAPRNGG*FCRSDRLTCLPKPT
Trigger: GGTTGGTTTGGGGAGACAGGTGAGGCGGTCGGATCTACAGAACAACCCACCATTTCTGGGGGCCGCAGAGGATCCATCACAGACGGATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR-3UTR TCA 90 bp TTGCAAACCAAGGTGACACTGACAGGATGTGTGAGCTTCCCTGTGGCTGCCTCCCCCAGCTGGGGTCTGTaGTGCCACCAATGCACAGGA +
Preference number: 2 (lower is better)
Translates to: LQTKVTLTGCVSFPVAASPSWGL*CHQCTG
Trigger: TCCTGTGCATTGGTGGCATCACAGACCCCAGCTGGG...GGAGGCAGCCACAGGGAAGCTCACACATCCTGTCAGTGTCACCTTGGTTTGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR-3UTR GCA 90 bp TTCCCGCCACGTGGAGGAGTCTGCGACATTCCACACACAATGACAGTTAAAGACCCGGGAGGCGGAGCTTaGAGGGAGCAGAGATCAGGC +
Preference number: 2 (lower is better)
Translates to: FPPRGGVCDIPHTMTVKDPGGGA*REQRSG
Trigger: GCCTGATCTCTGCTCCCTGCAAGCTCCGCCTCCCGG...GTCTTTAACTGTCATTGTGTGTGGAATGTCGCAGACTCCTCCACGTGGCGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR-3UTR CCA 90 bp CCTCCCAGCAACTCCCTGAAGAAGGCGAGAGCCCCTGTCCTCACACTGGGGAGGCCATCTCAGACTGCATaGGACTTGCTTTATCACCAG +
Preference number: 2 (lower is better)
Translates to: PPSNSLKKARAPVLTLGRPSQTA*DLLYHQ
Trigger: CTGGTGATAAAGCAAGTCCCATGCAGTCTGAGATGG...CCTCCCCAGTGTGAGGACAGGGGCTCTCGCCTTCTTCAGGGAGTTGCTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421760.2
3UTR-3UTR GCA 90 bp CCTCCCAGCAACTCCCTGAAGAAGGCGAGAGCCCCTGTCCTCACACTGGGGAGGCTTGCCATCTCAGACTaGATGGGACTTGCTTTATCA +
Preference number: 2 (lower is better)
Translates to: PPSNSLKKARAPVLTLGRLAISD*MGLALS
Trigger: TGATAAAGCAAGTCCCATGCAGTCTGAGATGGCAAG...CCTCCCCAGTGTGAGGACAGGGGCTCTCGCCTTCTTCAGGGAGTTGCTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421760.2
3UTR-3UTR GCA 90 bp GTCACAGCTCAGTGTCGGCACCTGGCCACTGACCCAACACCTTCAGTTACCACAGTCTCTGGACACTGCTaGTTTGCTGTCCTAACAGCC +
Preference number: 2 (lower is better)
Translates to: VTAQCRHLATDPTPSVTTVSGHC*FAVLTA
Trigger: GGCTGTTAGGACAGCAAAGCAGCAGTGTCCAGAGAC...TGTGGTAACTGAAGGTGTTGGGTCAGTGGCCAGGTGCCGACACTGAGCTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR-3UTR CCA 90 bp TCAATGACAACACGACTCCAATTCCAGGTATGGGGTTTAGTGGACAACCAGCTTCGGTGCTCGGGCATCTaGAAGGAGGAAGCCGGCGTC +
Preference number: 2 (lower is better)
Translates to: SMTTRLQFQVWGLVDNQLRCSGI*KEEAGV
Trigger: GACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCG...AAGCTGGTTGTCCACTAAACCCCATACCTGGAATTGGAGTCGTGTTGTCATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CAA 90 bp GAGCAGTCGGGCTTCTGGGTCACTGCCCTTTCCCTAGAAGGTCCCTaGCCATCTCAGACTGCATGGGACTTGCTTTATCACCAGTGTATA +
Preference number: 2 (lower is better)
Translates to: EQSGFWVTALSLEGP*PSQTAWDLLYHQCI
Trigger: TATACACTGGTGATAAAGCAAGTCCCATGCAGTCTGAGATGGCAAGGGACCTTCTAGGGAAAGGGCAGTGACCCAGAAGCCCGACTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421760.2
3UTR-3UTR TCA 90 bp CCTGATCTGGTTGTCTCCTCAGCCCGCCTTCCGTGGGGAGGCAAAACAGCCCTGTTTAAATCGAGTCAATaGCAACACGACTCCAATTCC +
Preference number: 2 (lower is better)
Translates to: PDLVVSSARLPWGGKTALFKSSQ*QHDSNS
Trigger: GGAATTGGAGTCGTGTTGTCATTGACTCGATTTAAA...CAGGGCTGTTTTGCCTCCCCACGGAAGGCGGGCTGAGGAGACAACCAGATCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CAA 90 bp GCCCTTTCCCTAGAAGGTCCCTTGCCATCTCAGACTGCATGGGACTaGCTTTATCACCAGTGTATACCACACACGAGGCTTCCTGTGACT +
Preference number: 2 (lower is better)
Translates to: ALSLEGPLPSQTAWD*LYHQCIPHTRLPVT
Trigger: AGTCACAGGAAGCCTCGTGTGTGGTATACACTGGTGATAAAGCAAGTCCCATGCAGTCTGAGATGGCAAGGGACCTTCTAGGGAAAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421760.2
3UTR-3UTR TCA 90 bp CAGGCATCTGTCAGGAAACAGCCGGCCCCTCTACCAGGAGAAACCAGTCAGCTCGATCCACTATACGGCTaGAACACATTTTGCACAAGA +
Preference number: 2 (lower is better)
Translates to: QASVRKQPAPLPGETSQLDPLYG*NTFCTR
Trigger: TCTTGTGCAAAATGTGTTTCAGCCGTATAGTGGATC...GAGCTGACTGGTTTCTCCTGGTAGAGGGGCCGGCTGTTTCCTGACAGATGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR-3UTR CCA 90 bp CATTCATTTTTAAGGGAAAAGTGGAGTCAAATGTGCTCAGAACAACTGAGTCCCTACCCTTATGGGACCTaGGAGGCCGCCCTGATGTGG +
Preference number: 2 (lower is better)
Translates to: HSFLREKWSQMCSEQLSPYPYGT*EAALMW
Trigger: CCACATCAGGGCGGCCTCCCAGGTCCCATAAGGGTA...GGGACTCAGTTGTTCTGAGCACATTTGACTCCACTTTTCCCTTAAAAATGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR-3UTR TCA 90 bp TTTACATATACTCCATTTTGTCCTCCCAGCAACTCCCTGAAGAAGGCGAGAGCCACACGAGGCTTCCTGTaGCTTAATTTCTCAATGATT +
Preference number: 2 (lower is better)
Translates to: FTYTPFCPPSNSLKKARATRGFL*LNFSMI
Trigger: AATCATTGAGAAATTAAGTCACAGGAAGCCTCGTGT...GGCTCTCGCCTTCTTCAGGGAGTTGCTGGGAGGACAAAATGGAGTATATGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421760.2
3UTR GCA 72 bp CTGGCCGCAGCTGGCCTGGGGCTGAGCGTCAGGCTCTaGGGCTCCCACAGGGCGGCAGGTGACCTCCTGAGG +
Preference number: 3 (lower is better)
Translates to: LAAAGLGLSVRL*GSHRAAGDLLR
Trigger: CCTCAGGAGGTCACCTGCCGCCCTGTGGGAGCCGCAGAGCCTGACGCTCAGCCCCAGGCCAGCTGCGGCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CCA 72 bp ACCGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTaGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAG +
Preference number: 3 (lower is better)
Translates to: TALTCPTRCSGI*KEEAGVSAPQK
Trigger: CTTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
3UTR TCA 72 bp CCTGTGGCTGCCTCCCGGCACAGCTGTCCCGACCTTTaGCATCGCGCCCCAGCTGGGGTCTGTGATGCCACC +
Preference number: 3 (lower is better)
Translates to: PVAASRHSCPDL*HRAPAGVCDAT
Trigger: GGTGGCATCACAGACCCCAGCTGGGGCGCGATGTCAAAGGTCGGGACAGCTGTGCCGGGAGGCAGCCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR GCA 72 bp GACGGAGTCAGGACCGCGCTGACCTGCCCGACACGGTaGTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCA +
Preference number: 3 (lower is better)
Translates to: DGVRTALTCPTR*SGIWKEEAGVS
Trigger: TGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
3UTR GCA 72 bp GAGGAACAGCCGAGGGGCCGCACTGAACCTGGGGTCTaGAGCGTCCACCTGCCTCCCTCTCGCTCCACATGC +
Preference number: 3 (lower is better)
Translates to: EEQPRGRTEPGV*SVHLPPSRSTC
Trigger: GCATGTGGAGCGAGAGGGAGGCAGGTGGACGCTGCAGACCCCAGGTTCAGTGCGGCCCCTCGGCTGTTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CCA 72 bp GGCTACCCTTATGGGACCTGGGAGGCCGCCCTGATGTaGGACGGATGTCACCCGGTGGTCGCCCAGGCTCGT +
Preference number: 3 (lower is better)
Translates to: GYPYGTWEAALM*DGCHPVVAQAR
Trigger: ACGAGCCTGGGCGACCACCGGGTGACATCCGTCCCACATCAGGGCGGCCTCCCAGGTCCCATAAGGGTAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CCA 72 bp AGGGCTGGGCAGCTTGCTGAGGTCCATCGAGCGCTGTaGGGGCCAGGGCTTGGCACACACATGGAGACTGTG +
Preference number: 3 (lower is better)
Translates to: RAGQLAEVHRAL*GPGLGTHMETV
Trigger: CACAGTCTCCATGTGTGTGCCAAGCCCTGGCCCCCACAGCGCTCGATGGACCTCAGCAAGCTGCCCAGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CCA 72 bp CACGTCCACTCACGCCCACTTCCTCAGCGTCCCCTCTaGGTCACAGCTCAGTGTCGGCACCTGGCCACTGAC +
Preference number: 3 (lower is better)
Translates to: HVHSRPLPQRPL*VTAQCRHLATD
Trigger: GTCAGTGGCCAGGTGCCGACACTGAGCTGTGACCCAGAGGGGACGCTGAGGAAGTGGGCGTGAGTGGACGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CCA 72 bp GACGGAGTGCGGGAGCCAGCCGAGCAGTCGGGCTTCTaGGTCACTGCCCTTTCCCTAGAAGGTCCCTTGCCA +
Preference number: 3 (lower is better)
Translates to: DGVREPAEQSGF*VTALSLEGPLP
Trigger: TGGCAAGGGACCTTCTAGGGAAAGGGCAGTGACCCAGAAGCCCGACTGCTCGGCTGGCTCCCGCACTCCGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421760.2
3UTR-3UTR CAA 90 bp CCCCTGCTCACCAGGCATCTGTCAGGAAACAGCCGGCCCCTCTACCAGGAGAAACCAGGGCTGGGCAGCTaGCTGAGGTCCATCGAGCGC +
Preference number: 3 (lower is better)
Translates to: PLLTRHLSGNSRPLYQEKPGLGS*LRSIER
Trigger: GCGCTCGATGGACCTCAGCAAGCTGCCCAGCCCTGG...TTTCTCCTGGTAGAGGGGCCGGCTGTTTCCTGACAGATGCCTGGTGAGCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR GCA 72 bp GACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTaGCCGACACGGTGCTCGGGCATCTGGAAGGAGGAA +
Preference number: 3 (lower is better)
Translates to: DNQLDGVRTALT*PTRCSGIWKEE
Trigger: TTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
3UTR GCA 72 bp GTGGGACGGATGTCACCCGGTGGTCGCCCAGGCTCGTaGTGGGCCACACAACTGCGTTTCCACATTTCCTCC +
Preference number: 3 (lower is better)
Translates to: VGRMSPGGRPGS*WATQLRFHISS
Trigger: GGAGGAAATGTGGAAACGCAGTTGTGTGGCCCAGCACGAGCCTGGGCGACCACCGGGTGACATCCGTCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CCA 72 bp CGTGGCCCAGGGTGTGCAGGACAGGGTGCGGACCTTTaGGGATTGAGGGGTCTCTGGACACTGCTGCTTTGC +
Preference number: 3 (lower is better)
Translates to: RGPGCAGQGADL*GLRGLWTLLLC
Trigger: GCAAAGCAGCAGTGTCCAGAGACCCCTCAATCCCCAAAGGTCCGCACCCTGTCCTGCACACCCTGGGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR-3UTR CAA 90 bp CTCTGGGTCACAGCTCAGTGTCGGCACCTGGCCACTGACCCAACACCTTCAGTTCAGCTGTCCCGACCTTaGACATCGCGCCCCAGCTGG +
Preference number: 3 (lower is better)
Translates to: LWVTAQCRHLATDPTPSVQLSRP*TSRPSW
Trigger: CCAGCTGGGGCGCGATGTCAAAGGTCGGGACAGCTG...AACTGAAGGTGTTGGGTCAGTGGCCAGGTGCCGACACTGAGCTGTGACCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR TCA 72 bp AGGAGACCAGGTTCACAGAGGGGAGGAAACACACTCTaGCCACAGGACGGAGTGCGGGAGCCAGCCGAGCAG +
Preference number: 3 (lower is better)
Translates to: RRPGSQRGGNTL*PQDGVREPAEQ
Trigger: CTGCTCGGCTGGCTCCCGCACTCCGTCCTGTGGTCAGAGTGTGTTTCCTCCCCTCTGTGAACCTGGTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421760.2
3UTR CCA 72 bp GGACGGATGTCACCCGGTGGTCGCCCAGGCTCGTGCTaGGCCACACAACTGCGTTTCCACATTTCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: GRMSPGGRPGSC*ATQLRFHISSL
Trigger: CAAGGAGGAAATGTGGAAACGCAGTTGTGTGGCCCAGCACGAGCCTGGGCGACCACCGGGTGACATCCGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CCA 72 bp TCTCCTGATCTGGTTGTCTCCTCAGCCCGCCTTCCGTaGGGAGGCAAAACAGCCCTGTGGAGTTGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: SPDLVVSSARLP*GGKTALWSWVG
Trigger: CCCCACCCAACTCCACAGGGCTGTTTTGCCTCCCCACGGAAGGCGGGCTGAGGAGACAACCAGATCAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CCA 72 bp ATCGAGCGCTGTGGGGGCCAGGGCTTGGCACACACATaGAGACTGTGCCCTGATATCCCCACCCTTCTGCAG +
Preference number: 3 (lower is better)
Translates to: IERCGGQGLAHT*RLCPDIPTLLQ
Trigger: CTGCAGAAGGGTGGGGATATCAGGGCACAGTCTCCATGTGTGTGCCAAGCCCTGGCCCCCACAGCGCTCGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR TCA 72 bp ACCAACCTCGGGTTCATTCTCCCAGAAGTCCAGGGATaGGCTTGTTGCAGCAGAGGGGTGTGGCCGGCGTGG +
Preference number: 3 (lower is better)
Translates to: TNLGFILPEVQG*ACCSRGVWPAW
Trigger: CCACGCCGGCCACACCCCTCTGCTGCAACAAGCTCATCCCTGGACTTCTGGGAGAATGAACCCGAGGTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR TCA 72 bp CCACCGACCATCAACAACCAGTGCCTGGTAACCACCTaGCACGTCCACTCACGCCCACTTCCTCAGCGTCCC +
Preference number: 3 (lower is better)
Translates to: PPTINNQCLVTT*HVHSRPLPQRP
Trigger: GGGACGCTGAGGAAGTGGGCGTGAGTGGACGTGTCAGGTGGTTACCAGGCACTGGTTGTTGATGGTCGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR GCA 72 bp CCGGTGGTCGCCCAGGCTCGTGCTGGGCCACACAACTaGGTTTCCACATTTCCTCCTTGGCTCCCCTATTCT +
Preference number: 3 (lower is better)
Translates to: PVVAQARAGPHN*VSTFPPWLPYS
Trigger: AGAATAGGGGAGCCAAGGAGGAAATGTGGAAACGCAGTTGTGTGGCCCAGCACGAGCCTGGGCGACCACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CCA 72 bp CCACATGCTCAGCCGTCCTTTCCTGGGCACCTGGCCTaGGCCGTTTACTCCCCAGTATCCGTCTGTGATGGA +
Preference number: 3 (lower is better)
Translates to: PHAQPSFPGHLA*AVYSPVSVCDG
Trigger: TCCATCACAGACGGATACTGGGGAGTAAACGGCCCAGGCCAGGTGCCCAGGAAAGGACGGCTGAGCATGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR-3UTR CAA 90 bp CCACCTGACACGTCCACTCACGCCCACTTCCTCAGCGTCCCCTCTGGGTCACAGCCGGGGATATGGGTTTaGCAAACCAAGGTGACACTG +
Preference number: 3 (lower is better)
Translates to: PPDTSTHAHFLSVPSGSQPGIWV*QTKVTL
Trigger: CAGTGTCACCTTGGTTTGCAAAACCCATATCCCCGG...CTGTGACCCAGAGGGGACGCTGAGGAAGTGGGCGTGAGTGGACGTGTCAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR TCA 72 bp CCAATTCCAGGTATGGGGTTTAGTGGACAACCAGCTTaGCGGAGTCAGGACCGCGCTGACCTGCCCGACACG +
Preference number: 3 (lower is better)
Translates to: PIPGMGFSGQPA*RSQDRADLPDT
Trigger: CGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAAACCCCATACCTGGAATTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR TCA 72 bp CCGGCCCCTCTACCAGGAGAAACCAGTCAGCTCCGCTaGACAGTGGCACATGTGCGGTTGAGGGGAGATTGT +
Preference number: 3 (lower is better)
Translates to: PAPLPGETSQLR*TVAHVRLRGDC
Trigger: ACAATCTCCCCTCAACCGCACATGTGCCACTGTTCAGCGGAGCTGACTGGTTTCTCCTGGTAGAGGGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR TCA 72 bp CGCCACGTGGAGGAGTCTGCGACATTCCACACACAATaGCAGTTAAAGACACCTGCTGACCACTGGGTCCTG +
Preference number: 3 (lower is better)
Translates to: RHVEESATFHTQ*QLKTPADHWVL
Trigger: CAGGACCCAGTGGTCAGCAGGTGTCTTTAACTGTCATTGTGTGTGGAATGTCGCAGACTCCTCCACGTGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CCA 72 bp GAAGGAGCAGCCGCTAGGGCTGCTGAGCGCCAGCTCTaGGGAGGAGGGCTTGAAACAGTTTTATATGTTGTT +
Preference number: 3 (lower is better)
Translates to: EGAAARAAERQL*GGGLETVLYVV
Trigger: AACAACATATAAAACTGTTTCAAGCCCTCCTCCCCAGAGCTGGCGCTCAGCAGCCCTAGCGGCTGCTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR TCA 72 bp TCCCGACCTTTGACATCGCGCCCCAGCTGGGGTCTGTaGTGCCACCAATGCACAGGAACAAGACATTCATTT +
Preference number: 3 (lower is better)
Translates to: SRPLTSRPSWGL*CHQCTGTRHSF
Trigger: AAATGAATGTCTTGTTCCTGTGCATTGGTGGCATCACAGACCCCAGCTGGGGCGCGATGTCAAAGGTCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR GCA 72 bp TGCCCTTTCCCTAGAAGGTCCCTTGCCATCTCAGACTaGATGGGACTTGCTTTATCACCAGTGTATACCACA +
Preference number: 3 (lower is better)
Translates to: CPFPRRSLAISD*MGLALSPVYTT
Trigger: TGTGGTATACACTGGTGATAAAGCAAGTCCCATGCAGTCTGAGATGGCAAGGGACCTTCTAGGGAAAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421760.2
3UTR CCA 72 bp ATCGAGTCAATGACAACACGACTCCAATTCCAGGTATaGGGTTTAGTGGACAACCAGCTTGACGGAGTCAGG +
Preference number: 3 (lower is better)
Translates to: IESMTTRLQFQV*GLVDNQLDGVR
Trigger: CCTGACTCCGTCAAGCTGGTTGTCCACTAAACCCCATACCTGGAATTGGAGTCGTGTTGTCATTGACTCGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CCA 72 bp CTTTCCCTAGAAGGTCCCTTGCCATCTCAGACTGCATaGGACTTGCTTTATCACCAGTGTATACCACACACG +
Preference number: 3 (lower is better)
Translates to: LSLEGPLPSQTA*DLLYHQCIPHT
Trigger: CGTGTGTGGTATACACTGGTGATAAAGCAAGTCCCATGCAGTCTGAGATGGCAAGGGACCTTCTAGGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421760.2
3UTR-3UTR CAA 90 bp ATGACTTTTACATATACTCCATTTTGTCCTCCCAGCAACTCCCTGAAGAAGGCGTCCCTAGAAGGTCCCTaGCCATCTCAGACTGCATGG +
Preference number: 3 (lower is better)
Translates to: MTFTYTPFCPPSNSLKKASLEGP*PSQTAW
Trigger: CCATGCAGTCTGAGATGGCAAGGGACCTTCTAGGGA...CGCCTTCTTCAGGGAGTTGCTGGGAGGACAAAATGGAGTATATGTAAAAGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421760.2
3UTR GCA 72 bp TATTTACACAGCTCATTCCCGCCACGTGGAGGAGTCTaGGACATTCCACACACAATGACAGTTAAAGACACC +
Preference number: 3 (lower is better)
Translates to: YLHSSFPPRGGV*DIPHTMTVKDT
Trigger: GGTGTCTTTAACTGTCATTGTGTGTGGAATGTCGCAGACTCCTCCACGTGGCGGGAATGAGCTGTGTAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CCA 72 bp TTTATTGAAGTATTTACACAGCTCATTCCCGCCACGTaGAGGAGTCTGCGACATTCCACACACAATGACAGT +
Preference number: 3 (lower is better)
Translates to: FIEVFTQLIPAT*RSLRHSTHNDS
Trigger: ACTGTCATTGTGTGTGGAATGTCGCAGACTCCTCCACGTGGCGGGAATGAGCTGTGTAAATACTTCAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp GCCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGGAGCCGCGGTGGAACTaGAGGGCGCCCTCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: AGVSAPQKPRTVGLPPRPEPRWN*RAPSEP
Trigger: CGGCTCGGAGGGCGCCCTGCAGTTCCACCGCGGCTC...CGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CCA 90 bp GCCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGAGAAGCCCCGAACCGTaGGCCTCCCGCCGCGTCCGA +
Preference number: 4 (lower is better)
Translates to: AGVSAPQKPRTVGLPPRPRSPEP*ASRRVR
Trigger: TCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCT...CGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR GCA 90 bp GCAGGGCTCAGCCGGGCCGGGTGGGCGCCCCAAGAGAGAGGACGGGCTGCCCTCAGGACCGCGCTGACCTaGCCGACACGGTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: AGLSRAGWAPQERGRAALRTALT*PTRCSG
Trigger: GCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCT...GAGGGCAGCCCGTCCTCTCTCTTGGGGCGCCCACCCGGCCCGGCTGAGCCCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp GTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCGCAAACCCCGGACGGTaGGGCGCGGGGAAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: VSAPQKPRTVGLPPRPTGANPGR*GAGKGA
Trigger: TGCGCCCTTCCCCGCGCCCCACCGTCCGGGGTTTGC...GCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000402066.5
CDS-3UTR TCA 90 bp GGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAACCCCGATCTCCCCGTaGAACGCGCAGCCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: GVSAPQKPRTVGLPPRPTTPISP*NAQPAQ
Trigger: CTGCGCGGGCTGCGCGTTTCACGGGGAGATCGGGGT...TGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000402066.5
CDS-3UTR CCA 90 bp AGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGGGTTTGCAGGAAGGACTaGGCGCGGGAGCCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SPAEAPNRGPPAASDRQGVCRKD*AREPRW
Trigger: CCACCGCGGCTCCCGCGCCCAGTCCTTCCTGCAAAC...CCCCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR TCA 90 bp AGCCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCCAGGCCGCCAGCACGTaGTGTTGTCCCAGACGCCAC +
Preference number: 4 (lower is better)
Translates to: SRRLSPAEAPNRGPPAASQAAST*CCPRRH
Trigger: GTGGCGTCTGGGACAACATCACGTGCTGGCGGCCTG...GGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000402066.5
CDS-3UTR TCA 90 bp CGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGGAGTCAGGACCGCGCTaGCCTGCCCGACACGGTGCT +
Preference number: 4 (lower is better)
Translates to: RLSPAEAPNRGPPAASDRESGPR*PARHGA
Trigger: AGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACTC...CCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR GCA 90 bp CCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGTCCATGCACCGATaGAGACGGTGGGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PASQPRRSPEPWASRRVRQSMHR*RRWGGP
Trigger: GGGGCCTCCCCACCGTCTGCATCGGTGCATGGACTG...TCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR GCA 90 bp CAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGCCTGGCCGCAGTCCATaGACCGATGCAGACGGTGGG +
Preference number: 4 (lower is better)
Translates to: QPRRSPEPWASRRVRQAGPGRSP*TDADGG
Trigger: CCCACCGTCTGCATCGGTGCATGGACTGCGGCCAGG...CCCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR GCA 90 bp CCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGAGGACCGAGAGGCATCTaGGGCCAACGCCAACCCCGA +
Preference number: 4 (lower is better)
Translates to: PASQPRRSPEPWASRRVRGPRGI*GQRQPR
Trigger: TCGGGGTTGGCGTTGGCCGCAGATGCCTCTCGGTCC...TCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402066.5
CDS-3UTR CCA 90 bp TCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGCCACCACCAGGCCCTaGAACGACCCGAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: SAPQKPRTVGLPPRPTGRATTRP*NDPRHS
Trigger: GCTGTGCCTCGGGTCGTTCCAGGGCCTGGTGGTGGC...CCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CCA 90 bp CGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGGCCACCACCAGGCCCTaGAACGACCCGAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: RLSPAEAPNRGPPAASDRATTRP*NDPRHS
Trigger: GCTGTGCCTCGGGTCGTTCCAGGGCCTGGTGGTGGC...CCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CCA 90 bp CAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGCGGTGCTCGGGCATCTaGAAGGAGGAAGCCGGCGTC +
Preference number: 4 (lower is better)
Translates to: QPRRSPEPWASRRVRQAGRCSGI*KEEAGV
Trigger: GACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCG...CCCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CCA 90 bp CGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACACGGATGTCACCCGGTaGTCGCCCAGGCTCGTGCTG +
Preference number: 4 (lower is better)
Translates to: RRLSPAEAPNRGPPAASDTDVTR*SPRLVL
Trigger: CAGCACGAGCCTGGGCGACCACCGGGTGACATCCGT...GTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp TCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCATGCAGCAGAGGGGTGTaGCCGGCGTGGCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SQPRRSPEPWASRRVRQACSRGV*PAWPRV
Trigger: CACCCTGGGCCACGCCGGCCACACCCCTCTGCTGCA...TGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp GCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGCGCTCTGGGGGTCTCTaGCAGGCTCCTCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: ASQPRRSPEPWASRRVRQRSGGL*QAPPGT
Trigger: GGTGCCAGGAGGAGCCTGCCAGAGACCCCCAGAGCG...CTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR TCA 90 bp CTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGCAGGCCGCCAGCACGTaGTGTTGTCCCAGACGCCAC +
Preference number: 4 (lower is better)
Translates to: LSPAEAPNRGPPAASDRQQAAST*CCPRRH
Trigger: GTGGCGTCTGGGACAACATCACGTGCTGGCGGCCTG...CTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000402066.5
CDS-3UTR TCA 90 bp CAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGTTGGGCAGGGCACCGTaGCGGTCTCTCCCACATTGG +
Preference number: 4 (lower is better)
Translates to: QPRRSPEPWASRRVRQAGLGRAP*RSLPHW
Trigger: CCAATGTGGGAGAGACCGTCACGGTGCCCTGCCCAA...CCCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000402066.5
CDS-3UTR TCA 90 bp GCCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGAGGGGTGGGGCTAGATaGCCGAGGTCTCCGTTTGCA +
Preference number: 4 (lower is better)
Translates to: AGVSAPQKPRTVGLPPRPRGGAR*PRSPFA
Trigger: TGCAAACGGAGACCTCGGTCATCTAGCCCCACCCCT...CGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR TCA 90 bp GCCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGTGCTGCTCTCAGAGGTaGTTTGGGGCAGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: AGVSAPQKPRTVGLPPRPCCSQR*FGAGRS
Trigger: AGAGCGGCCTGCCCCAAATCACCTCTGAGAGCAGCA...CGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR GCA 90 bp GCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGCCTGGCCGCAGTCCATaGACCGATGCAGACGGTGGG +
Preference number: 4 (lower is better)
Translates to: ASQPRRSPEPWASRRVRQPGRSP*TDADGG
Trigger: CCCACCGTCTGCATCGGTGCATGGACTGCGGCCAGG...CTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR GCA 90 bp AGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGGACCGAGGTCTCCGTTTaGAGGAAGGACTGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: SPAEAPNRGPPAASDRQGTEVSV*RKDWAR
Trigger: CCGCGCCCAGTCCTTCCTGCAAACGGAGACCTCGGT...CCCCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR GCA 90 bp GGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGTCGCCCAGGCTCGTaGTGGGCCACACAACTGCGT +
Preference number: 4 (lower is better)
Translates to: GVSAPQKPRTVGLPPRPTGRPGS*WATQLR
Trigger: ACGCAGTTGTGTGGCCCAGCACGAGCCTGGGCGACC...TGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp CAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGACTGAACCTGGGGTCTaGAGCGTCCACCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: QPRRSPEPWASRRVRQAGTEPGV*SVHLPP
Trigger: GGGAGGCAGGTGGACGCTGCAGACCCCAGGTTCAGT...CCCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp AGCCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGCCCACCCAGGAGGATaGCTGGTCAGGGCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: SRRLSPAEAPNRGPPAASAHPGG*LVRAVQ
Trigger: TTGCACTGCCCTGACCAGCCATCCTCCTGGGTGGGC...GGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CCA 90 bp CAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGGCCCACCCAGGAGGATaGCTGGTCAGGGCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: QPRRSPEPWASRRVRQAGAHPGG*LVRAVQ
Trigger: TTGCACTGCCCTGACCAGCCATCCTCCTGGGTGGGC...CCCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CCA 90 bp GGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACACGGTGCTCGGGCATCTaGAAGGAGGAAGCCGGCGTC +
Preference number: 4 (lower is better)
Translates to: GVSAPQKPRTVGLPPRPTRCSGI*KEEAGV
Trigger: GACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCG...TGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CCA 90 bp CCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGATCAGCCCGCCTTCCGTaGGGAGGCAAAACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PASQPRRSPEPWASRRVRSARLP*GGKTAL
Trigger: CAGGGCTGTTTTGCCTCCCCACGGAAGGCGGGCTGA...TCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp GGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGCCAGCCTCTTGTACTaGGACTGGTCGTTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GVSAPQKPRTVGLPPRPTASLLY*DWSLPP
Trigger: CGGCGGCAACGACCAGTCTCAGTACAAGAGGCTGGC...TGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR TCA 90 bp CGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGTGGACAACCAGCTTaGCGGAGTCAGGACCGCGCT +
Preference number: 4 (lower is better)
Translates to: RRLSPAEAPNRGPPAASDSGQPA*RSQDRA
Trigger: AGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACT...GTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR TCA 90 bp CTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGCAGAGCCAGAGCTGCTaGGGGTCCCACGGAACACCT +
Preference number: 4 (lower is better)
Translates to: LSPAEAPNRGPPAASDRQQSQSC*GSHGTP
Trigger: AGGTGTTCCGTGGGACCCTCAGCAGCTCTGGCTCTG...CTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp AGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGGCCCAGCTGGGGTCTGTaGTGCCACCAATGCACAGGA +
Preference number: 4 (lower is better)
Translates to: SPAEAPNRGPPAASDRQGPSWGL*CHQCTG
Trigger: TCCTGTGCATTGGTGGCATCACAGACCCCAGCTGGG...CCCCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp GTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCGGCTGGTCAGGGCAGTaGAACGTGCCAGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VSAPQKPRTVGLPPRPTGGWSGQ*NVPELE
Trigger: CTCCAGCTCTGGCACGTTGCACTGCCCTGACCAGCC...GCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CCA 90 bp CCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAGAAGCCCCGAACCGTaGGCCTCCCGCCGCGTCCGA +
Preference number: 4 (lower is better)
Translates to: PTRCSGIWKEEAGVSAPQRSPEP*ASRRVR
Trigger: TCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCT...CTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR CCA 90 bp CAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGTACCCTTATGGGACCTaGGAGGCCGCCCTGATGTGG +
Preference number: 4 (lower is better)
Translates to: QPRRSPEPWASRRVRQAGYPYGT*EAALMW
Trigger: CCACATCAGGGCGGCCTCCCAGGTCCCATAAGGGTA...CCCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp CCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAAGGCCTGGCCGCAGCTaGCCTGGGGCTGAGCGTCAG +
Preference number: 4 (lower is better)
Translates to: PDTVLGHLEGGSRRLSPARPGRS*PGAERQ
Trigger: CTGACGCTCAGCCCCAGGCCAGCTGCGGCCAGGCCT...TGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp CGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACGGGCAAGGCTGGGGGTaGGTCTGTCCAAACCCTACA +
Preference number: 4 (lower is better)
Translates to: RRLSPAEAPNRGPPAASDGQGWG*VCPNPT
Trigger: TGTAGGGTTTGGACAGACCCACCCCCAGCCTTGCCC...GTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp CCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGAAATCGGCATTCTGGGTaGATGCTGTTCACGGGGGCG +
Preference number: 4 (lower is better)
Translates to: PASQPRRSPEPWASRRVRNRHSG*MLFTGA
Trigger: CGCCCCCGTGAACAGCATTCACCCAGAATGCCGATT...TCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp CTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGAGGGGTGGGGCTAGATaGCCGAGGTCTCCGTTTGCA +
Preference number: 4 (lower is better)
Translates to: LSPAEAPNRGPPAASDRQRGGAR*PRSPFA
Trigger: TGCAAACGGAGACCTCGGTCATCTAGCCCCACCCCT...CTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR GCA 90 bp CGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGCCCCGCCCTCCGAGCCGTTaGGGGAGAAGGAGGAACCGC +
Preference number: 4 (lower is better)
Translates to: RCSGIWKEEAGVSAPQKPRPPSR*GRRRNR
Trigger: GCGGTTCCTCCTTCTCCCGCAACGGCTCGGAGGGCG...GGGCTTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR GCA 90 bp GACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGAGCCGCGGTGGAACTaGAGGGCGCCCTCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: DTVLGHLEGGSRRLSPAEEPRWN*RAPSEP
Trigger: CGGCTCGGAGGGCGCCCTGCAGTTCCACCGCGGCTC...TTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR GCA 90 bp GCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGTCTCTGTGGCCGCCTTaGTGTCCCCGTTCCCATCAC +
Preference number: 4 (lower is better)
Translates to: ASQPRRSPEPWASRRVRQSLWPP*CPRSHH
Trigger: GTGATGGGAACGGGGACAGCAAGGCGGCCACAGAGA...CTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR CCA 90 bp CTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGTTTGCAGGAAGGACTaGGCGCGGGAGCCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LPDTVLGHLEGGSRRLSPVCRKD*AREPRW
Trigger: CCACCGCGGCTCCCGCGCCCAGTCCTTCCTGCAAAC...GGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR CCA 90 bp CGGAGTCAGGACCGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAAGAAGCCCCGAACCGTaGGCCTCCCGCCGCGTCCGA +
Preference number: 4 (lower is better)
Translates to: RSQDRADLPDTVLGHLEGRSPEP*ASRRVR
Trigger: TCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCT...TCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR CCA 90 bp CGGAGTCAGGACCGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGACCCTGTGGAGTTGGGTaGGGCAGGGCTCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RSQDRADLPDTVLGHLEGPCGVG*GRAQPG
Trigger: GCCCGGCTGAGCCCTGCCCCACCCAACTCCACAGGG...TCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp GTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCCCACCCTTCTGCAGCTaGCTCAGCAACGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: VSAPQKPRTVGLPPRPTGPPFCS*LSNVPR
Trigger: TCTGGGGACGTTGCTGAGCCAGCTGCAGAAGGGTGG...GCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp GTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCCAGGGTGCGGACCTTTaGGGATTGAGGGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VSAPQKPRTVGLPPRPTGQGADL*GLRGLW
Trigger: CCAGAGACCCCTCAATCCCCAAAGGTCCGCACCCTG...GCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp GCAGGGCTCAGCCGGGCCGGGTGGGCGCCCCAAGAGAGAGGACGGGCTGCCCTCAGAGAACGTCGTCCTTaGCCAGCACTGAGATGGCTC +
Preference number: 4 (lower is better)
Translates to: AGLSRAGWAPQERGRAALRERRP*PALRWL
Trigger: GAGCCATCTCAGTGCTGGTCAAGGACGACGTTCTCT...GAGGGCAGCCCGTCCTCTCTCTTGGGGCGCCCACCCGGCCCGGCTGAGCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp AGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGGAGAGAACGTCGTCCTTaGCCAGCACTGAGATGGCTC +
Preference number: 4 (lower is better)
Translates to: SPAEAPNRGPPAASDRQGRERRP*PALRWL
Trigger: GAGCCATCTCAGTGCTGGTCAAGGACGACGTTCTCT...CCCCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR TCA 90 bp AGCCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCAGAGAACGTCGTCCTTaGCCAGCACTGAGATGGCTC +
Preference number: 4 (lower is better)
Translates to: SRRLSPAEAPNRGPPAASRERRP*PALRWL
Trigger: GAGCCATCTCAGTGCTGGTCAAGGACGACGTTCTCT...GGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR TCA 90 bp CGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGACCTGGGAGGCCGCCCTaGTGTGGGACGGATGTCACC +
Preference number: 4 (lower is better)
Translates to: RHGARASGRRKPASQPRRPGRPP*CGTDVT
Trigger: GGTGACATCCGTCCCACATCAGGGCGGCCTCCCAGG...TCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp TCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCACGGACCTTTGGGGATTaGGGGGTCTCTGGACACTGC +
Preference number: 4 (lower is better)
Translates to: SQPRRSPEPWASRRVRQARTFGD*GVSGHC
Trigger: GCAGTGTCCAGAGACCCCTCAATCCCCAAAGGTCCG...TGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp AGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGGCTCCCTTTTGTCCTTTaGAAGCTGGGCAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SPAEAPNRGPPAASDRQGLPFVL*KLGKAG
Trigger: CCCAGCCTTGCCCAGCTTTCAAAGGACAAAAGGGAG...CCCCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp TCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGTTCCCATCACTCGATaGGCCAATGCCCTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: SAPQKPRTVGLPPRPTGRVPITR*ANALVA
Trigger: AGCCACGAGGGCATTGGCTCATCGAGTGATGGGAAC...CCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR TCA 90 bp CGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGTACTGTGTCCATGGCTaGGACCACCCTCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RLSPAEAPNRGPPAASDRYCVHG*DHPLCG
Trigger: GCCACAGAGAGGGTGGTCTCAGCCATGGACACAGTA...CCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR TCA 90 bp CCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGAGAACGAGCTCATCGTTaGCGCGTCCAGGAAGAAACG +
Preference number: 4 (lower is better)
Translates to: PASQPRRSPEPWASRRVRERAHR*RVQEET
Trigger: CGTTTCTTCCTGGACGCGTCAACGATGAGCTCGTTC...TCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402066.5
CDS-3UTR GCA 90 bp CGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACGCCATGATGCAGTACTaGAGGAAGACCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RRLSPAEAPNRGPPAASDAMMQY*RKTRLS
Trigger: GCTGAGCCTGGTCTTCCTGCAGTACTGCATCATGGC...GTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR GCA 90 bp CCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGAGCCATGATGCAGTACTaGAGGAAGACCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PASQPRRSPEPWASRRVRAMMQY*RKTRLS
Trigger: GCTGAGCCTGGTCTTCCTGCAGTACTGCATCATGGC...TCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR GCA 90 bp GGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAACTGAGACTGGTCGTTaGCGCCGACATCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: GVSAPQKPRTVGLPPRPTTETGR*RRHLGM
Trigger: CATCCCCAGATGTCGGCGGCAACGACCAGTCTCAGT...TGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR GCA 90 bp CTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGACTGAGACTGGTCGTTaGCGCCGACATCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: LSPAEAPNRGPPAASDRQTETGR*RRHLGM
Trigger: CATCCCCAGATGTCGGCGGCAACGACCAGTCTCAGT...CTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR GCA 90 bp GTCAGGACCGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAAGGACCGCGCTGACCTaGCCGACACGGTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: VRTALTCPTRCSGIWKEERTALT*PTRCSG
Trigger: GCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCT...TTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR GCA 90 bp AGCCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCATATCCCCACCCTTCTaGAGCTGGCTCAGCAACGTC +
Preference number: 4 (lower is better)
Translates to: SRRLSPAEAPNRGPPAASISPPF*SWLSNV
Trigger: GACGTTGCTGAGCCAGCTGCAGAAGGGTGGGGATAT...GGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp CAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGAACGTGATCTCGGGATaGTTCCGCCGTACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: QPRRSPEPWASRRVRQAGNVISG*FRRTVS
Trigger: GGACACAGTACGGCGGAAGCATCCCGAGATCACGTT...CCCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR CCA 90 bp CTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGCAGGAGCGTGGACTTaGCCAGCCTCTTGTACTGAG +
Preference number: 4 (lower is better)
Translates to: LSPAEAPNRGPPAASDRQAGAWT*PASCTE
Trigger: CTCAGTACAAGAGGCTGGCCAAGTCCACGCTCCTGC...CTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CCA 90 bp GTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCGCAGGAGCGTGGACTTaGCCAGCCTCTTGTACTGAG +
Preference number: 4 (lower is better)
Translates to: VSAPQKPRTVGLPPRPTGAGAWT*PASCTE
Trigger: CTCAGTACAAGAGGCTGGCCAAGTCCACGCTCCTGC...GCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CCA 90 bp GCAGGGCTCAGCCGGGCCGGGTGGGCGCCCCAAGAGAGAGGACGGGCTGCCCTCCACGGAACACCTGTGTaGAGAGGTCCCCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: AGLSRAGWAPQERGRAALHGTPV*RGPLLH
Trigger: ATGAAGGAGGGGACCTCTCCACACAGGTGTTCCGTG...GAGGGCAGCCCGTCCTCTCTCTTGGGGCGCCCACCCGGCCCGGCTGAGCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp CGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCTCATTCCCGCCACGTaGAGGAGTCTGCGACATTCC +
Preference number: 4 (lower is better)
Translates to: RLSPAEAPNRGPPAASDRLIPAT*RSLRHS
Trigger: GGAATGTCGCAGACTCCTCCACGTGGCGGGAATGAG...CCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp GCCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGAGATGGCTCTCAGGATaGAGGACAGGAACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: AGVSAPQKPRTVGLPPRPRWLSG*RTGTGS
Trigger: TGAACCTGTTCCTGTCCTTCATCCTGAGAGCCATCT...CGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR TCA 90 bp CGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACGTCCTTGACCAGCACTaGGATGGCTCTCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: RRLSPAEAPNRGPPAASDVLDQH*DGSQDE
Trigger: TTCATCCTGAGAGCCATCTCAGTGCTGGTCAAGGAC...GTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR TCA 90 bp ACTGGGTCCTGCTTCCCCTGCTCACCAGGCATCTGTCAGGAAACAGCCGGCCCCGCCGAGGGGCCGCACTaGACCTGGGGTCTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: TGSCFPCSPGICQETAGPAEGPH*TWGLQR
Trigger: ACGCTGCAGACCCCAGGTTCAGTGCGGCCCCTCGGC...GGGGCCGGCTGTTTCCTGACAGATGCCTGGTGAGCAGGGGAAGCAGGACCCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp GTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCCAGGGCAGTGCAACGTaGCAGAGCTGGAGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: VSAPQKPRTVGLPPRPTGQGSAT*QSWSRE
Trigger: TTCTCTACTCCAGCTCTGGCACGTTGCACTGCCCTG...GCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR GCA 90 bp CTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGCAGGGCAGTGCAACGTaGCAGAGCTGGAGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: LSPAEAPNRGPPAASDRQQGSAT*QSWSRE
Trigger: TTCTCTACTCCAGCTCTGGCACGTTGCACTGCCCTG...CTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR GCA 90 bp ACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGCCCAGTCCATGCACCGATaGAGACGGTGGGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: TVLGHLEGGSRRLSPAEAQSMHR*RRWGGP
Trigger: GGGGCCTCCCCACCGTCTGCATCGGTGCATGGACTG...GGCTTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR GCA 90 bp ACCGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCACCGAGGTCTCCGTTTaGAGGAAGGACTGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: TALTCPTRCSGIWKEEAGTEVSV*RKDWAR
Trigger: CCGCGCCCAGTCCTTCCTGCAAACGGAGACCTCGGT...GCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR GCA 90 bp ACCGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCACCTGCCCGACACGGTaGTCGGGCATCTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: TALTCPTRCSGIWKEEAGTCPTR*SGIWKE
Trigger: CTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGT...GCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR GCA 90 bp GTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGAGAGAGGACGGGCTaGCCTCCTGTTGATTTCTCC +
Preference number: 4 (lower is better)
Translates to: VSAPQKPRTVGLPPRPTGRERTG*PPVDFS
Trigger: GGAGAAATCAACAGGAGGGCAGCCCGTCCTCTCTCT...GCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp TCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGTGTGCAGGACAGGGTaGGGACCTTTGGGGATTGAG +
Preference number: 4 (lower is better)
Translates to: SQPRRSPEPWASRRVRQAVCRTG*GPLGIE
Trigger: CTCAATCCCCAAAGGTCCGCACCCTGTCCTGCACAC...TGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp ACCGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCCTGACCACTGGGTCCTaGTTCCCCTGCTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: TALTCPTRCSGIWKEEAGLTTGS*FPCSPG
Trigger: GCCTGGTGAGCAGGGGAAGCAGGACCCAGTGGTCAG...GCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp CAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGATTGCTGAAGACTTTTaGGCAGGGCACCGTGACGGT +
Preference number: 4 (lower is better)
Translates to: QPRRSPEPWASRRVRQAGIAEDF*AGHRDG
Trigger: ACCGTCACGGTGCCCTGCCCAAAAGTCTTCAGCAAT...CCCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000402066.5
CDS-3UTR CCA 90 bp CGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGCCCCACCGATGCAGACGGTaGGGAGGCCCCATCCGATCA +
Preference number: 4 (lower is better)
Translates to: RCSGIWKEEAGVSAPQKPHRCRR*GGPIRS
Trigger: TGATCGGATGGGGCCTCCCCACCGTCTGCATCGGTG...GGGCTTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CCA 90 bp CGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCGCCCAGGCTCGTGCTaGGCCACACAACTGCGTTTC +
Preference number: 4 (lower is better)
Translates to: RADLPDTVLGHLEGGSRRRPGSC*ATQLRF
Trigger: GAAACGCAGTTGTGTGGCCCAGCACGAGCCTGGGCG...ACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp ACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGCCAGGGGGCTACCCTTATaGGACCTGGGAGGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: TVLGHLEGGSRRLSPAEARGLPL*DLGGRP
Trigger: AGGGCGGCCTCCCAGGTCCCATAAGGGTAGCCCCCT...GGCTTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp GCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCGTCCATCGAGCGCTGTaGGGGCCAGGGCTTGGCACA +
Preference number: 4 (lower is better)
Translates to: ADLPDTVLGHLEGGSRRLVHRAL*GPGLGT
Trigger: TGTGCCAAGCCCTGGCCCCCACAGCGCTCGATGGAC...GAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp TGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCCTTTCCTGGGCACCTaGCCTGGGCCGTTTACTCCC +
Preference number: 4 (lower is better)
Translates to: CPTRCSGIWKEEAGVSAPPFLGT*PGPFTP
Trigger: GGGAGTAAACGGCCCAGGCCAGGTGCCCAGGAAAGG...CGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp CTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGGCACCCTGGGAGGCTaGTGTGTCCTTGCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LPDTVLGHLEGGSRRLSPGTLGG*CVLAGL
Trigger: CAACCCTGCAAGGACACACCAGCCTCCCAGGGTGCC...GGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR TCA 90 bp CGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGATCTGGGAACGTCTCTaGCCATCCGTCACTCGTACA +
Preference number: 4 (lower is better)
Translates to: RLSPAEAPNRGPPAASDRIWERL*PSVTRT
Trigger: TGTACGAGTGACGGATGGTCAGAGACGTTCCCAGAT...CCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000402066.5
CDS-3UTR TCA 90 bp GCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCGCCAGCCTCTTGTACTaGGACTGGTCGTTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: ADLPDTVLGHLEGGSRRLASLLY*DWSLPP
Trigger: CGGCGGCAACGACCAGTCTCAGTACAAGAGGCTGGC...GAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR TCA 90 bp CTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCAGGGGTGGGGCTAGATaGCCGAGGTCTCCGTTTGCA +
Preference number: 4 (lower is better)
Translates to: LPDTVLGHLEGGSRRLSPRGGAR*PRSPFA
Trigger: TGCAAACGGAGACCTCGGTCATCTAGCCCCACCCCT...GGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR TCA 90 bp GCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGATGACCTTGCTCTCCTaGTCTGGTTGTCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: ASQPRRSPEPWASRRVRQMTLLS*SGCLLS
Trigger: GCTGAGGAGACAACCAGATCAGGAGAGCAAGGTCAT...CTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp GTCAGGACCGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGGCTGGGCAGCTTGCTaGGGTCCATCGAGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: VRTALTCPTRCSGIWKEEGWAAC*GPSSAV
Trigger: CACAGCGCTCGATGGACCTCAGCAAGCTGCCCAGCC...TTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp GCCGCCCTGATGTGGGACGGATGTCACCCGGTGGTCGCCCAGGCTCGTGCTGGGCCAGAAGTCCAGGGATaGGCTTGTTGCAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: AALMWDGCHPVVAQARAGPEVQG*ACCSRG
Trigger: CCCTCTGCTGCAACAAGCTCATCCCTGGACTTCTGG...CCCAGCACGAGCCTGGGCGACCACCGGGTGACATCCGTCCCACATCAGGGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp GTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCCCGACACGGTGCCCTCGTGGCTGGCATTaGGCTTGGCACCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VDNQLDGVRTALTCPTRCPRGWH*AWHLLG
Trigger: GCCCAGCAGGTGCCAAGCTCAATGCCAGCCACGAGG...GCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR GCA 90 bp CGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACTGTCCCAGACGCCACTaGAGGCTTTGTGTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: RRLSPAEAPNRGPPAASDCPRRH*RLCVFL
Trigger: CAGAAAAACACAAAGCCTGCAGTGGCGTCTGGGACA...GTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000402066.5
CDS-3UTR GCA 90 bp CTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCACAGTCCATGCACCGATaGAGACGGTGGGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LTCPTRCSGIWKEEAGVSQSMHR*RRWGGP
Trigger: GGGGCCTCCCCACCGTCTGCATCGGTGCATGGACTG...TGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR GCA 90 bp ACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGCCACCTGCCCGACACGGTaGTCGGGCATCTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: TVLGHLEGGSRRLSPAEATCPTR*SGIWKE
Trigger: CTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGT...GGCTTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR CCA 90 bp CCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAACCCAGGAGGATGGCTaGTCAGGGCAGTGCAACGTG +
Preference number: 4 (lower is better)
Translates to: PDTVLGHLEGGSRRLSPATQEDG*SGQCNV
Trigger: CACGTTGCACTGCCCTGACCAGCCATCCTCCTGGGT...TGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR CCA 90 bp CCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGACCCAGGAGGATGGCTaGTCAGGGCAGTGCAACGTG +
Preference number: 4 (lower is better)
Translates to: PTRCSGIWKEEAGVSAPQTQEDG*SGQCNV
Trigger: CACGTTGCACTGCCCTGACCAGCCATCCTCCTGGGT...CTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR CCA 90 bp CGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGCCCACCCAGGAGGATGGCTaGTCAGGGCAGTGCAACGTG +
Preference number: 4 (lower is better)
Translates to: RCSGIWKEEAGVSAPQKPTQEDG*SGQCNV
Trigger: CACGTTGCACTGCCCTGACCAGCCATCCTCCTGGGT...GGGCTTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CCA 90 bp ACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGCCCACCGATGCAGACGGTaGGGAGGCCCCATCCGATCA +
Preference number: 4 (lower is better)
Translates to: TVLGHLEGGSRRLSPAEAHRCRR*GGPIRS
Trigger: TGATCGGATGGGGCCTCCCCACCGTCTGCATCGGTG...GGCTTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CCA 90 bp GGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCTTGGCACACACATaGAGACTGTGCCCTGATATC +
Preference number: 4 (lower is better)
Translates to: GVSAPQKPRTVGLPPRPTGLAHT*RLCPDI
Trigger: GATATCAGGGCACAGTCTCCATGTGTGTGCCAAGCC...TGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp GACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAATCAGCCGTCCTTTCCTaGGCACCTGGCCTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: DTVLGHLEGGSRRLSPAESAVLS*APGLGR
Trigger: ACGGCCCAGGCCAGGTGCCCAGGAAAGGACGGCTGA...TTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp GCCGCCCTGATGTGGGACGGATGTCACCCGGTGGTCGCCCAGGCTCGTGCTGGGAAAGCTGGGCAAGGCTaGGGGTGGGTCTGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: AALMWDGCHPVVAQARAGKAGQG*GWVCPN
Trigger: GTTTGGACAGACCCACCCCCAGCCTTGCCCAGCTTT...CCCAGCACGAGCCTGGGCGACCACCGGGTGACATCCGTCCCACATCAGGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp ACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGCCCTCCTCCTGGCACCCTaGGAGGCTGGTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: TVLGHLEGGSRRLSPAEALLLAP*EAGVSL
Trigger: CAAGGACACACCAGCCTCCCAGGGTGCCAGGAGGAG...GGCTTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR TCA 90 bp CTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGTGCAGTGCAGCTTCCTaGAGAGGCACAGAATTATGC +
Preference number: 4 (lower is better)
Translates to: LSPAEAPNRGPPAASDRQCSAAS*RGTELC
Trigger: GCATAATTCTGTGCCTCTTCAGGAAGCTGCACTGCA...CTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR TCA 90 bp CCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGAAGAAGAAGTTGGCCATaGTGCAGTACTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PASQPRRSPEPWASRRVRRRSWP*CSTAGR
Trigger: TCTTCCTGCAGTACTGCATCATGGCCAACTTCTTCT...TCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR TCA 90 bp GGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAAAATCGGTATTCGTATaGCCCACCAGGGCACACTGT +
Preference number: 4 (lower is better)
Translates to: GVSAPQKPRTVGLPPRPTKSVFV*PTRAHC
Trigger: ACAGTGTGCCCTGGTGGGTCATACGAATACCGATTT...TGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR TCA 90 bp GCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGAAATCGGTATTCGTATaGCCCACCAGGGCACACTGT +
Preference number: 4 (lower is better)
Translates to: ASQPRRSPEPWASRRVRQKSVFV*PTRAHC
Trigger: ACAGTGTGCCCTGGTGGGTCATACGAATACCGATTT...CTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR TCA 90 bp CGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGTGGACAACCAGCTTaGCGGAGTCAGGACCGCGCT +
Preference number: 4 (lower is better)
Translates to: RHGARASGRRKPASQPRRSGQPA*RSQDRA
Trigger: AGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACT...TCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR TCA 90 bp TCGAGCGCTGTGGGGGCCAGGGCTTGGCACACACATGGAGACTGTGCCCTGATACCACAGGGCGGCAGGTaGCCTCCTGAGGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SSAVGARAWHTHGDCALIPQGGR*PPEAEP
Trigger: TGGCTCTGCCTCAGGAGGTCACCTGCCGCCCTGTGG...TATCAGGGCACAGTCTCCATGTGTGTGCCAAGCCCTGGCCCCCACAGCGCTCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp AGTCAGGACCGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAGGAGGGTTGGCGGGATaGTCAGATGGTGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SQDRADLPDTVLGHLEGGGGLAG*SDGASH
Trigger: GTGGGAGGCACCATCTGATCATCCCGCCAACCCTCC...TCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR GCA 90 bp CAGGCATCTGTCAGGAAACAGCCGGCCCCTCTACCAGGAGAAACCAGTCAGCTCGAGCCGCGGTGGAACTaGAGGGCGCCCTCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: QASVRKQPAPLPGETSQLEPRWN*RAPSEP
Trigger: CGGCTCGGAGGGCGCCCTGCAGTTCCACCGCGGCTC...GAGCTGACTGGTTTCTCCTGGTAGAGGGGCCGGCTGTTTCCTGACAGATGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp GCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCGTGTCCTTGCAGGGTTaGAGGAGGGTTGGCGGGATG +
Preference number: 4 (lower is better)
Translates to: ADLPDTVLGHLEGGSRRLVSLQG*RRVGGM
Trigger: CATCCCGCCAACCCTCCTGCAACCCTGCAAGGACAC...GAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR CCA 90 bp ACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGCCGCTGAGCGCCAGCTCTaGGGAGGAGGGCTTGAAACA +
Preference number: 4 (lower is better)
Translates to: TVLGHLEGGSRRLSPAEAAERQL*GGGLET
Trigger: TGTTTCAAGCCCTCCTCCCCAGAGCTGGCGCTCAGC...GGCTTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp CGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGCCCCTCAGTGTCGGCACCTaGCCACTGACCCAACACCTT +
Preference number: 4 (lower is better)
Translates to: RCSGIWKEEAGVSAPQKPLSVGT*PLTQHL
Trigger: AAGGTGTTGGGTCAGTGGCCAGGTGCCGACACTGAG...GGGCTTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp CCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCTTTGTCACCAGGGATaGGAGCCCTGGGGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: PARHGARASGRRKPASQPLCHQG*EPWGVK
Trigger: CTTCACTCCCCAGGGCTCCCATCCCTGGTGACAAAG...GGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR CCA 90 bp CCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGGAGCCAATGCCCTCGTaGCTGGCATTGAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: PTRCSGIWKEEAGVSAPQEPMPS*LALSLA
Trigger: TGCCAAGCTCAATGCCAGCCACGAGGGCATTGGCTC...CTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR TCA 90 bp GCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGAGAAGAAGTTGGCCATaGTGCAGTACTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: ASQPRRSPEPWASRRVRQRRSWP*CSTAGR
Trigger: TCTTCCTGCAGTACTGCATCATGGCCAACTTCTTCT...CTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR TCA 90 bp CGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGCCCGGGGAGATTGTCCCCTaGGCACACCTGATGACTGAT +
Preference number: 4 (lower is better)
Translates to: RCSGIWKEEAGVSAPQKPGEIVP*AHLMTD
Trigger: ATCAGTCATCAGGTGTGCTCAGGGGACAATCTCCCC...GGGCTTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp CTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAACCAGTCAGCTCCGCTaGACAGTGGCACATGTGCGG +
Preference number: 4 (lower is better)
Translates to: LTCPTRCSGIWKEEAGVSTSQLR*TVAHVR
Trigger: CCGCACATGTGCCACTGTTCAGCGGAGCTGACTGGT...TGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp TCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGAATCGGCATTCTGGGTaGATGCTGTTCACCAGTAAG +
Preference number: 4 (lower is better)
Translates to: SAPQKPRTVGLPPRPTGRNRHSG*MLFTSK
Trigger: CTTACTGGTGAACAGCATTCACCCAGAATGCCGATT...CCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402066.5
CDS-3UTR CCA 90 bp CGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGCCCCTTCTAAGTAGAGCCTaGCCGCAGTCCATGCACCGA +
Preference number: 4 (lower is better)
Translates to: RCSGIWKEEAGVSAPQKPLLSRA*PQSMHR
Trigger: TCGGTGCATGGACTGCGGCCAGGCTCTACTTAGAAG...GGGCTTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CCA 90 bp GACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGTGGGGGCCAGGGCTTaGCACACACATGGAGACTGT +
Preference number: 4 (lower is better)
Translates to: DTVLGHLEGGSRRLSPAEVGARA*HTHGDC
Trigger: ACAGTCTCCATGTGTGTGCCAAGCCCTGGCCCCCAC...TTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CAA 72 bp CGGGTTCATTCTCCCAGAAGTCCAGGGATGAGCTTGTaGCAGCAGAGGGGTGTGGCCGGCGTGGCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RVHSPRSPGMSL*QQRGVAGVAQG
Trigger: ACCCTGGGCCACGCCGGCCACACCCCTCTGCTGCAACAAGCTCATCCCTGGACTTCTGGGAGAATGAACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp AGCCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCTTGTGTTTTTCTGTTTaGGACCTCAGAAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SRRLSPAEAPNRGPPAASLCFSV*DLRSSA
Trigger: TGCAGAGCTTCTGAGGTCTCAAACAGAAAAACACAA...GGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000402066.5
CDS-3UTR TCA 90 bp GCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGTGCTGTAAAAATTGCTaGAGACTTTTGGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ASQPRRSPEPWASRRVRQCCKNC*RLLGRA
Trigger: TGCCCTGCCCAAAAGTCTTCAGCAATTTTTACAGCA...CTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000402066.5
CDS-3UTR TCA 90 bp CCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGATCTGGGAACGTCTCTaGCCATCCGTCACTCGTACA +
Preference number: 4 (lower is better)
Translates to: PTRCSGIWKEEAGVSAPQIWERL*PSVTRT
Trigger: TGTACGAGTGACGGATGGTCAGAGACGTTCCCAGAT...CTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp CGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGCCCGTCCTTGACCAGCACTaGGATGGCTCTCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: RCSGIWKEEAGVSAPQKPVLDQH*DGSQDE
Trigger: TTCATCCTGAGAGCCATCTCAGTGCTGGTCAAGGAC...GGGCTTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR TCA 90 bp TTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCCCGACACGGGCCAGCCTCTTGTACTaGGACTGGTCGTTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LVDNQLDGVRTALTCPTRASLLY*DWSLPP
Trigger: CGGCGGCAACGACCAGTCTCAGTACAAGAGGCTGGC...CCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR TCA 90 bp GTATGGGGTTTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCGAGTCAGGACCGCGCTaGCCTGCCCGACACGGTGCT +
Preference number: 4 (lower is better)
Translates to: VWGLVDNQLDGVRTALTCESGPR*PARHGA
Trigger: AGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACTC...GCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAAACCCCATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR TCA 90 bp GTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCCCGACACGGTGCTCGGCACCTGGCCACTaGCCCAACACCTTCAGTTAC +
Preference number: 4 (lower is better)
Translates to: VDNQLDGVRTALTCPTRCSAPGH*PNTFSY
Trigger: GTAACTGAAGGTGTTGGGTCAGTGGCCAGGTGCCGA...GCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp ACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGCCCAGGGCAGTGCAACGTaGCAGAGCTGGAGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: TVLGHLEGGSRRLSPAEAQGSAT*QSWSRE
Trigger: TTCTCTACTCCAGCTCTGGCACGTTGCACTGCCCTG...GGCTTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR GCA 90 bp GACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAACTGAGACTGGTCGTTaGCGCCGACATCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: DTVLGHLEGGSRRLSPAETETGR*RRHLGM
Trigger: CATCCCCAGATGTCGGCGGCAACGACCAGTCTCAGT...TTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR GCA 90 bp GTATGGGGTTTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCCGCCCTCCGAGCCGTTaGGGGAGAAGGAGGAACCGC +
Preference number: 4 (lower is better)
Translates to: VWGLVDNQLDGVRTALTCRPPSR*GRRRNR
Trigger: GCGGTTCCTCCTTCTCCCGCAACGGCTCGGAGGGCG...GCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAAACCCCATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR GCA 90 bp CCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGTGGACACTGCTGCTTTaGTGTCCTAACAGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PTRCSGIWKEEAGVSAPQWTLLL*CPNSPS
Trigger: AGAGGGGCTGTTAGGACAGCAAAGCAGCAGTGTCCA...CTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp CCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGGTCTCTGGACACTGCTaGTTTGCTGTCCTAACAGCC +
Preference number: 4 (lower is better)
Translates to: PTRCSGIWKEEAGVSAPQVSGHC*FAVLTA
Trigger: GGCTGTTAGGACAGCAAAGCAGCAGTGTCCAGAGAC...CTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp ACTGGGTCCTGCTTCCCCTGCTCACCAGGCATCTGTCAGGAAACAGCCGGCCCCGGGTCCTGCTTCCCCTaGTCACCAGGCATCTGTCAG +
Preference number: 4 (lower is better)
Translates to: TGSCFPCSPGICQETAGPGSCFP*SPGICQ
Trigger: CTGACAGATGCCTGGTGAGCAGGGGAAGCAGGACCC...GGGGCCGGCTGTTTCCTGACAGATGCCTGGTGAGCAGGGGAAGCAGGACCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp TGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGTCCCACAAAGGCATCTaGAGTGCCAGCTGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: CPTRCSGIWKEEAGVSAPSHKGI*SASCCD
Trigger: ATCACAGCAGCTGGCACTGCAGATGCCTTTGTGGGA...CGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR GCA 90 bp TCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGGCATTCTGGGTGAATaGTGTTCACCAGTAAGTACA +
Preference number: 4 (lower is better)
Translates to: SAPQKPRTVGLPPRPTGRGILGE*CSPVST
Trigger: TGTACTTACTGGTGAACAGCATTCACCCAGAATGCC...CCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402066.5
CDS-3UTR CCA 90 bp CGGAGTCAGGACCGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGCAACGTGCCAGAGCTaGAGTAGAGAACGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: RSQDRADLPDTVLGHLEGATCQS*SRERRP
Trigger: AGGACGACGTTCTCTACTCCAGCTCTGGCACGTTGC...TCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR CCA 90 bp TTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCCCGACACGGGCCCACCCAGGAGGATaGCTGGTCAGGGCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: LVDNQLDGVRTALTCPTRAHPGG*LVRAVQ
Trigger: TTGCACTGCCCTGACCAGCCATCCTCCTGGGTGGGC...CCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR CCA 90 bp GACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGCAGGAGCGTGGACTTaGCCAGCCTCTTGTACTGAG +
Preference number: 4 (lower is better)
Translates to: DTVLGHLEGGSRRLSPAEAGAWT*PASCTE
Trigger: CTCAGTACAAGAGGCTGGCCAAGTCCACGCTCCTGC...TTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR CCA 90 bp GTATGGGGTTTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCGCCACCACCAGGCCCTaGAACGACCCGAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: VWGLVDNQLDGVRTALTCATTRP*NDPRHS
Trigger: GCTGTGCCTCGGGTCGTTCCAGGGCCTGGTGGTGGC...GCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAAACCCCATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR CCA 90 bp CCTGATCTGGTTGTCTCCTCAGCCCGCCTTCCGTGGGGAGGCAAAACAGCCCTGGCTCCCCTATTCTCTTaGGCCGGGCGCAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PDLVVSSARLPWGGKTALAPLFS*AGRSGS
Trigger: TGAGCCACTGCGCCCGGCCCAAGAGAATAGGGGAGC...CAGGGCTGTTTTGCCTCCCCACGGAAGGCGGGCTGAGGAGACAACCAGATCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp TTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCCCGACACGGCCTCAGCGTCCCCTCTaGGTCACAGCTCAGTGTCGG +
Preference number: 4 (lower is better)
Translates to: LVDNQLDGVRTALTCPTRPQRPL*VTAQCR
Trigger: CCGACACTGAGCTGTGACCCAGAGGGGACGCTGAGG...CCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp TCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGATGAAATCGGCATTCTaGGTGAATGCTGTTCACCAG +
Preference number: 4 (lower is better)
Translates to: SAPQKPRTVGLPPRPTGRMKSAF*VNAVHQ
Trigger: CTGGTGAACAGCATTCACCCAGAATGCCGATTTCAT...CCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402066.5
CDS-3UTR TCA 90 bp CGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGCCCTGCAGTGCAGCTTCCTaGAGAGGCACAGAATTATGC +
Preference number: 4 (lower is better)
Translates to: RCSGIWKEEAGVSAPQKPCSAAS*RGTELC
Trigger: GCATAATTCTGTGCCTCTTCAGGAAGCTGCACTGCA...GGGCTTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR TCA 90 bp CGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTTGCAGTGCAGCTTCCTaGAGAGGCACAGAATTATGC +
Preference number: 4 (lower is better)
Translates to: RADLPDTVLGHLEGGSRRCSAAS*RGTELC
Trigger: GCATAATTCTGTGCCTCTTCAGGAAGCTGCACTGCA...ACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR TCA 90 bp CCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCAGATGGCTCTCAGGATaGAGGACAGGAACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: PARHGARASGRRKPASQPRWLSG*RTGTGS
Trigger: TGAACCTGTTCCTGTCCTTCATCCTGAGAGCCATCT...GGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR TCA 90 bp TCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGATCCACTATACGGCTaGAACACATTTTGCACAAGA +
Preference number: 4 (lower is better)
Translates to: SAPQKPRTVGLPPRPTGRDPLYG*NTFCTR
Trigger: TCTTGTGCAAAATGTGTTTCAGCCGTATAGTGGATC...CCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp CAGGTATGGGGTTTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCCGGCAGGTGACCTCCTaGGGCAGAGCCAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QVWGLVDNQLDGVRTALTRQVTS*GRARAA
Trigger: AGCAGCTCTGGCTCTGCCTCAGGAGGTCACCTGCCG...GGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAAACCCCATACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp CCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGTGTCCCAGACGCCACTaGAGGCTTTGTGTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: PTRCSGIWKEEAGVSAPQCPRRH*RLCVFL
Trigger: CAGAAAAACACAAAGCCTGCAGTGGCGTCTGGGACA...CTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp CTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGAGAGGCACAGAATTATaGTTCCTGTTGCAAGAGACA +
Preference number: 4 (lower is better)
Translates to: LSPAEAPNRGPPAASDRQRGTEL*FLLQET
Trigger: TGTCTCTTGCAACAGGAAGCATAATTCTGTGCCTCT...CTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR GCA 90 bp CTCTGGGTCACAGCTCAGTGTCGGCACCTGGCCACTGACCCAACACCTTCAGTTCCTGGCCGCAGTCCATaGACCGATGCAGACGGTGGG +
Preference number: 4 (lower is better)
Translates to: LWVTAQCRHLATDPTPSVPGRSP*TDADGG
Trigger: CCCACCGTCTGCATCGGTGCATGGACTGCGGCCAGG...AACTGAAGGTGTTGGGTCAGTGGCCAGGTGCCGACACTGAGCTGTGACCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp CAGGCATCTGTCAGGAAACAGCCGGCCCCTCTACCAGGAGAAACCAGTCAGCTCCCGGGAGGCGGAGCTTaGAGGGAGCAGAGATCAGGC +
Preference number: 4 (lower is better)
Translates to: QASVRKQPAPLPGETSQLPGGGA*REQRSG
Trigger: GCCTGATCTCTGCTCCCTGCAAGCTCCGCCTCCCGG...GAGCTGACTGGTTTCTCCTGGTAGAGGGGCCGGCTGTTTCCTGACAGATGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp ACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGCCGGGATGATCAGATGGTaGCTCCCACAAAGGCATCTG +
Preference number: 4 (lower is better)
Translates to: TVLGHLEGGSRRLSPAEAGMIRW*LPQRHL
Trigger: CAGATGCCTTTGTGGGAGGCACCATCTGATCATCCC...GGCTTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR CCA 90 bp ACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGCCATTGCTGAAGACTTTTaGGCAGGGCACCGTGACGGT +
Preference number: 4 (lower is better)
Translates to: TVLGHLEGGSRRLSPAEAIAEDF*AGHRDG
Trigger: ACCGTCACGGTGCCCTGCCCAAAAGTCTTCAGCAAT...GGCTTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000402066.5
CDS-3UTR CCA 90 bp GGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAAGCTCAAACAGTATCTaGTATTTGGAGGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: GVSAPQKPRTVGLPPRPTSSNSI*YLEEML
Trigger: CAGCATCTCCTCCAAATACCAGATACTGTTTGAGCT...TGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CCA 90 bp GTCACAGCTCAGTGTCGGCACCTGGCCACTGACCCAACACCTTCAGTTACCACAGTTTGCAGGAAGGACTaGGCGCGGGAGCCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VTAQCRHLATDPTPSVTTVCRKD*AREPRW
Trigger: CCACCGCGGCTCCCGCGCCCAGTCCTTCCTGCAAAC...TGTGGTAACTGAAGGTGTTGGGTCAGTGGCCAGGTGCCGACACTGAGCTGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp CTCTGGGTCACAGCTCAGTGTCGGCACCTGGCCACTGACCCAACACCTTCAGTTCGGTGCTCGGGCATCTaGAAGGAGGAAGCCGGCGTC +
Preference number: 4 (lower is better)
Translates to: LWVTAQCRHLATDPTPSVRCSGI*KEEAGV
Trigger: GACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCG...AACTGAAGGTGTTGGGTCAGTGGCCAGGTGCCGACACTGAGCTGTGACCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp CAGGCATCTGTCAGGAAACAGCCGGCCCCTCTACCAGGAGAAACCAGTCAGCTCGAGGCCGCCCTGATGTaGGACGGATGTCACCCGGTG +
Preference number: 4 (lower is better)
Translates to: QASVRKQPAPLPGETSQLEAALM*DGCHPV
Trigger: CACCGGGTGACATCCGTCCCACATCAGGGCGGCCTC...GAGCTGACTGGTTTCTCCTGGTAGAGGGGCCGGCTGTTTCCTGACAGATGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
3UTR CAA 72 bp TTGCTGAGGTCCATCGAGCGCTGTGGGGGCCAGGGCTaGGCACACACATGGAGACTGTGCCCTGATATCCCC +
Preference number: 4 (lower is better)
Translates to: LLRSIERCGGQG*AHTWRLCPDIP
Trigger: GGGGATATCAGGGCACAGTCTCCATGTGTGTGCCAAGCCCTGGCCCCCACAGCGCTCGATGGACCTCAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp TTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCCCGACACGGTGTGCTCAGAACAACTaGGTCCCACAGTCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: LVDNQLDGVRTALTCPTRCAQNN*VPQSGH
Trigger: GTGCCCCGACTGTGGGACTCAGTTGTTCTGAGCACA...CCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp GACTGCCCACACCCAACCACCGACCATCAACAACCAGTGCCTGGTAACCACCTGCCCAGTATCCGTCTGTaGTGGATCCTCTGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: DCPHPTTDHQQPVPGNHLPSIRL*WILCGP
Trigger: GGGGCCGCAGAGGATCCATCACAGACGGATACTGGG...CAGGTGGTTACCAGGCACTGGTTGTTGATGGTCGGTGGTTGGGTGTGGGCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp CAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGGAAGTCAGGCTTTATTaGAGTATTTACACAGCTCAT +
Preference number: 4 (lower is better)
Translates to: QPRRSPEPWASRRVRQAGEVRLY*SIYTAH
Trigger: ATGAGCTGTGTAAATACTTCAATAAAGCCTGACTTC...CCCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp CAGGTATGGGGTTTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCGGCTGGTCAGGGCAGTaGAACGTGCCAGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QVWGLVDNQLDGVRTALTGWSGQ*NVPELE
Trigger: CTCCAGCTCTGGCACGTTGCACTGCCCTGACCAGCC...GGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAAACCCCATACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR GCA 90 bp CCCCTGCTCACCAGGCATCTGTCAGGAAACAGCCGGCCCCTCTACCAGGAGAAACAGAGATCAGGCCACTaGAGTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: PLLTRHLSGNSRPLYQEKQRSGH*SPAWAT
Trigger: TGTCGCCCAGGCTGGACTGCAGTGGCCTGATCTCTG...TTTCTCCTGGTAGAGGGGCCGGCTGTTTCCTGACAGATGCCTGGTGAGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp AGTCAGGACCGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAGCTGGGCCACACAACTaGGTTTCCACATTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SQDRADLPDTVLGHLEGGAGPHN*VSTFPP
Trigger: AGGAGGAAATGTGGAAACGCAGTTGTGTGGCCCAGC...TCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp GACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAACCACGTGGAGGAGTCTaGGACATTCCACACACAATG +
Preference number: 4 (lower is better)
Translates to: DTVLGHLEGGSRRLSPAEPRGGV*DIPHTM
Trigger: CATTGTGTGTGGAATGTCGCAGACTCCTCCACGTGG...TTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp CAGGTATGGGGTTTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCCACCGATGCAGACGGTaGGGAGGCCCCATCCGATCA +
Preference number: 4 (lower is better)
Translates to: QVWGLVDNQLDGVRTALTHRCRR*GGPIRS
Trigger: TGATCGGATGGGGCCTCCCCACCGTCTGCATCGGTG...GGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAAACCCCATACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR CCA 90 bp CTCTGGGTCACAGCTCAGTGTCGGCACCTGGCCACTGACCCAACACCTTCAGTTCCTGGGCACCTGGCCTaGGCCGTTTACTCCCCAGTA +
Preference number: 4 (lower is better)
Translates to: LWVTAQCRHLATDPTPSVPGHLA*AVYSPV
Trigger: TACTGGGGAGTAAACGGCCCAGGCCAGGTGCCCAGG...AACTGAAGGTGTTGGGTCAGTGGCCAGGTGCCGACACTGAGCTGTGACCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp GTCACAGCTCAGTGTCGGCACCTGGCCACTGACCCAACACCTTCAGTTACCACATTGGGCAGGGCACCGTaGCGGTCTCTCCCACATTGG +
Preference number: 4 (lower is better)
Translates to: VTAQCRHLATDPTPSVTTLGRAP*RSLPHW
Trigger: CCAATGTGGGAGAGACCGTCACGGTGCCCTGCCCAA...TGTGGTAACTGAAGGTGTTGGGTCAGTGGCCAGGTGCCGACACTGAGCTGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp GACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCCCGACACGGTGCTCGAGATGGCTCTCAGGATaGAGGACAGGAACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: DNQLDGVRTALTCPTRCSRWLSG*RTGTGS
Trigger: TGAACCTGTTCCTGTCCTTCATCCTGAGAGCCATCT...CGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR TCA 90 bp CGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGAAGAAGTTGGCCATaGTGCAGTACTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RHGARASGRRKPASQPRRRRSWP*CSTAGR
Trigger: TCTTCCTGCAGTACTGCATCATGGCCAACTTCTTCT...TCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR TCA 90 bp GACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAAAATCGGTATTCGTATaGCCCACCAGGGCACACTGT +
Preference number: 4 (lower is better)
Translates to: DTVLGHLEGGSRRLSPAEKSVFV*PTRAHC
Trigger: ACAGTGTGCCCTGGTGGGTCATACGAATACCGATTT...TTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR TCA 90 bp GTATGGGGTTTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCTGCCTGGTAACCACCTaGCACGTCCACTCACGCCCA +
Preference number: 4 (lower is better)
Translates to: VWGLVDNQLDGVRTALTCCLVTT*HVHSRP
Trigger: TGGGCGTGAGTGGACGTGTCAGGTGGTTACCAGGCA...GCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAAACCCCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp TTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCCCGACACGGGCCATGATGCAGTACTaGAGGAAGACCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LVDNQLDGVRTALTCPTRAMMQY*RKTRLS
Trigger: GCTGAGCCTGGTCTTCCTGCAGTACTGCATCATGGC...CCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR GCA 90 bp CCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGTGGAGTCAAATGTaGTCAGAACAACTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: PTRCSGIWKEEAGVSAPQKWSQM*SEQLSP
Trigger: GGGACTCAGTTGTTCTGAGCACATTTGACTCCACTT...CTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp GTATGGGGTTTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCCCCTCTCGCTCCACATaGTCAGCCGTCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: VWGLVDNQLDGVRTALTCPSRST*SAVLSW
Trigger: CCAGGAAAGGACGGCTGAGCATGTGGAGCGAGAGGG...GCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAAACCCCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp GGTCACTGCCCTTTCCCTAGAAGGTCCCTTGCCATCTCAGACTGCATGGGACTTGACCACAGGACGGAGTaGGGGAGCCAGCCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GHCPFPRRSLAISDCMGLDHRTE*GSQPSS
Trigger: ACTGCTCGGCTGGCTCCCGCACTCCGTCCTGTGGTC...AAGTCCCATGCAGTCTGAGATGGCAAGGGACCTTCTAGGGAAAGGGCAGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS-3UTR CCA 90 bp CGGAGTCAGGACCGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAATGAAATCGGCATTCTaGGTGAATGCTGTTCACGGG +
Preference number: 4 (lower is better)
Translates to: RSQDRADLPDTVLGHLEGMKSAF*VNAVHG
Trigger: CCCGTGAACAGCATTCACCCAGAATGCCGATTTCAT...TCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp TTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCCCGACACGGCTTCTAAGTAGAGCCTaGCCGCAGTCCATGCACCGA +
Preference number: 4 (lower is better)
Translates to: LVDNQLDGVRTALTCPTRLLSRA*PQSMHR
Trigger: TCGGTGCATGGACTGCGGCCAGGCTCTACTTAGAAG...CCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
3UTR CAA 72 bp TGTGATGGATCCTCTGCGGCCCCCAGAAATGGTGGGTaGTTCTGTAGATCCGACCGCCTCACCTGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: CDGSSAAPRNGG*FCRSDRLTCLP
Trigger: GGGGAGACAGGTGAGGCGGTCGGATCTACAGAACAACCCACCATTTCTGGGGGCCGCAGAGGATCCATCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp CAGGTATGGGGTTTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCGGCATTCTGGGTGAATaGTGTTCACGGGGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: QVWGLVDNQLDGVRTALTGILGE*CSRGRA
Trigger: TGCTCGCCCCCGTGAACAGCATTCACCCAGAATGCC...GGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAAACCCCATACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp CGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAAGCCCAGAGGCACAGAATTATaGTTCCTGTTGCAAGAGACA +
Preference number: 4 (lower is better)
Translates to: RCSGIWKEEAGVSAPQKPRGTEL*FLLQET
Trigger: TGTCTCTTGCAACAGGAAGCATAATTCTGTGCCTCT...GGGCTTCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CCA 90 bp AGTCAGGACCGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGACTCCAATTCCAGGTATaGGGTTTAGTGGACAACCAG +
Preference number: 4 (lower is better)
Translates to: SQDRADLPDTVLGHLEGGLQFQV*GLVDNQ
Trigger: CTGGTTGTCCACTAAACCCCATACCTGGAATTGGAG...TCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp CCTGATCTGGTTGTCTCCTCAGCCCGCCTTCCGTGGGGAGGCAAAACAGCCCTGGGATTGAGGGGTCTCTaGACACTGCTGCTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PDLVVSSARLPWGGKTALGLRGL*TLLLCC
Trigger: ACAGCAAAGCAGCAGTGTCCAGAGACCCCTCAATCC...CAGGGCTGTTTTGCCTCCCCACGGAAGGCGGGCTGAGGAGACAACCAGATCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp CTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCATGCTGTAAAAATTGCTaGAGACTTTTGGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LTCPTRCSGIWKEEAGVSCCKNC*RLLGRA
Trigger: TGCCCTGCCCAAAAGTCTTCAGCAATTTTTACAGCA...TGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp CTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCTTTAAATCGAGTCAATaGCAACACGACTCCAATTCC +
Preference number: 4 (lower is better)
Translates to: LPDTVLGHLEGGSRRLSPFKSSQ*QHDSNS
Trigger: GGAATTGGAGTCGTGTTGTCATTGACTCGATTTAAA...GGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp TTCCCGCCACGTGGAGGAGTCTGCGACATTCCACACACAATGACAGTTAAAGACAGCTGTCCCGACCTTTaGCATCGCGCCCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FPPRGGVCDIPHTMTVKDSCPDL*HRAPAG
Trigger: CCCAGCTGGGGCGCGATGTCAAAGGTCGGGACAGCT...GTCTTTAACTGTCATTGTGTGTGGAATGTCGCAGACTCCTCCACGTGGCGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp CAGGCATCTGTCAGGAAACAGCCGGCCCCTCTACCAGGAGAAACCAGTCAGCTCCTGATGACTGATGACTaGCCACACCCAACCACCGAC +
Preference number: 4 (lower is better)
Translates to: QASVRKQPAPLPGETSQLLMTDD*PHPTTD
Trigger: GTCGGTGGTTGGGTGTGGGCAGTCATCAGTCATCAG...GAGCTGACTGGTTTCTCCTGGTAGAGGGGCCGGCTGTTTCCTGACAGATGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp GACTGCCCACACCCAACCACCGACCATCAACAACCAGTGCCTGGTAACCACCTGCTTCTAAGTAGAGCCTaGCCGCAGTCCATGCACCGA +
Preference number: 4 (lower is better)
Translates to: DCPHPTTDHQQPVPGNHLLLSRA*PQSMHR
Trigger: TCGGTGCATGGACTGCGGCCAGGCTCTACTTAGAAG...CAGGTGGTTACCAGGCACTGGTTGTTGATGGTCGGTGGTTGGGTGTGGGCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CCA 90 bp GTATGGGGTTTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCGGCGGGATGATCAGATaGTGCCTCCCACAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: VWGLVDNQLDGVRTALTCGGMIR*CLPQRH
Trigger: ATGCCTTTGTGGGAGGCACCATCTGATCATCCCGCC...GCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAAACCCCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR TCA 90 bp GTATGGGGTTTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCGTCCTTGACCAGCACTaGGATGGCTCTCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: VWGLVDNQLDGVRTALTCVLDQH*DGSQDE
Trigger: TTCATCCTGAGAGCCATCTCAGTGCTGGTCAAGGAC...GCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAAACCCCATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR CCA 90 bp GTCAGGACCGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAAGCTCAAACAGTATCTaGTATTTGGAGGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: VRTALTCPTRCSGIWKEESSNSI*YLEEML
Trigger: CAGCATCTCCTCCAAATACCAGATACTGTTTGAGCT...TTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR TCA 90 bp GAGCCAGCCGAGCAGTCGGGCTTCTGGGTCACTGCCCTTTCCCTAGAAGGTCCCTTGTGTTTTTCTGTTTaGGACCTCAGAAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: EPAEQSGFWVTALSLEGPLCFSV*DLRSSA
Trigger: TGCAGAGCTTCTGAGGTCTCAAACAGAAAAACACAA...GGGACCTTCTAGGGAAAGGGCAGTGACCCAGAAGCCCGACTGCTCGGCTGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS-3UTR GCA 90 bp ACTGGGTCCTGCTTCCCCTGCTCACCAGGCATCTGTCAGGAAACAGCCGGCCCCAGAGGCACAGAATTATaGTTCCTGTTGCAAGAGACA +
Preference number: 4 (lower is better)
Translates to: TGSCFPCSPGICQETAGPRGTEL*FLLQET
Trigger: TGTCTCTTGCAACAGGAAGCATAATTCTGTGCCTCT...GGGGCCGGCTGTTTCCTGACAGATGCCTGGTGAGCAGGGGAAGCAGGACCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp TCAATGACAACACGACTCCAATTCCAGGTATGGGGTTTAGTGGACAACCAGCTTCTGAGCGTCAGGCTCTaGGGCTCCCACAGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: SMTTRLQFQVWGLVDNQLLSVRL*GSHRAA
Trigger: TGCCGCCCTGTGGGAGCCGCAGAGCCTGACGCTCAG...AAGCTGGTTGTCCACTAAACCCCATACCTGGAATTGGAGTCGTGTTGTCATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp TCCCAGCAACTCCCTGAAGAAGGCGAGAGCCCCTGTCCTCACACTGGGGAGGAGGAGACTCTTACGACATaGTCCCCCTTATCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: SQQLPEEGESPCPHTGEEETLTT*SPLSRK
Trigger: TTTCCTAGATAAGGGGGAGCATGTCGTAAGAGTCTC...CTCCTCCCCAGTGTGAGGACAGGGGCTCTCGCCTTCTTCAGGGAGTTGCTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS-3UTR CCA 90 bp CTCTGGGTCACAGCTCAGTGTCGGCACCTGGCCACTGACCCAACACCTTCAGTTAAACCTGAGAGTAGGTaGGGGATGCTCCCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: LWVTAQCRHLATDPTPSVKPESR*GMLPFV
Trigger: GACAAAAGGGAGCATCCCCCACCTACTCTCAGGTTT...AACTGAAGGTGTTGGGTCAGTGGCCAGGTGCCGACACTGAGCTGTGACCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp TCGAGCGCTGTGGGGGCCAGGGCTTGGCACACACATGGAGACTGTGCCCTGATAACATTCCACACACAATaGCAGTTAAAGACACCTGCT +
Preference number: 4 (lower is better)
Translates to: SSAVGARAWHTHGDCALITFHTQ*QLKTPA
Trigger: AGCAGGTGTCTTTAACTGTCATTGTGTGTGGAATGT...TATCAGGGCACAGTCTCCATGTGTGTGCCAAGCCCTGGCCCCCACAGCGCTCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp TTGCCATCTCAGACTGCATGGGACTTGCTTTATCACCAGTGTATACCACACACGCTCCCAGCAACTCCCTaGAGAAGGCGAGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LPSQTAWDLLYHQCIPHTLPATP*RRREPL
Trigger: CAGGGGCTCTCGCCTTCTTCAGGGAGTTGCTGGGAG...CGTGTGTGGTATACACTGGTGATAAAGCAAGTCCCATGCAGTCTGAGATGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS-3UTR CCA 90 bp TTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCCCGACACGGAGCTCAAACAGTATCTaGTATTTGGAGGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: LVDNQLDGVRTALTCPTRSSNSI*YLEEML
Trigger: CAGCATCTCCTCCAAATACCAGATACTGTTTGAGCT...CCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR TCA 90 bp CATCTCAGACTGCATGGGACTTGCTTTATCACCAGTGTATACCACACACGAGGCAATCGGCATTCTGGGTaGATGCTGTTCACGGGGGCG +
Preference number: 4 (lower is better)
Translates to: HLRLHGTCFITSVYHTRGNRHSG*MLFTGA
Trigger: CGCCCCCGTGAACAGCATTCACCCAGAATGCCGATT...GCCTCGTGTGTGGTATACACTGGTGATAAAGCAAGTCCCATGCAGTCTGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS-3UTR TCA 90 bp CTCTGGGTCACAGCTCAGTGTCGGCACCTGGCCACTGACCCAACACCTTCAGTTTTGTGTTTTTCTGTTTaGGACCTCAGAAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LWVTAQCRHLATDPTPSVLCFSV*DLRSSA
Trigger: TGCAGAGCTTCTGAGGTCTCAAACAGAAAAACACAA...AACTGAAGGTGTTGGGTCAGTGGCCAGGTGCCGACACTGAGCTGTGACCCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR GCA 90 bp CCTTGCCATCTCAGACTGCATGGGACTTGCTTTATCACCAGTGTATACCACACAGGCATTCTGGGTGAATaGTGTTCACGGGGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: PCHLRLHGTCFITSVYHTGILGE*CSRGRA
Trigger: TGCTCGCCCCCGTGAACAGCATTCACCCAGAATGCC...TGTGTGGTATACACTGGTGATAAAGCAAGTCCCATGCAGTCTGAGATGGCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS-3UTR GCA 90 bp CAGGTATGGGGTTTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCAATTATGCTTCCTGTTaGAAGAGACATCAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: QVWGLVDNQLDGVRTALTNYASC*KRHQRD
Trigger: GTCTCTCTGATGTCTCTTGCAACAGGAAGCATAATT...GGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAAACCCCATACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR GCA 90 bp TTTTACATATACTCCATTTTGTCCTCCCAGCAACTCCCTGAAGAAGGCGAGAGCGGGCTTCTGGGTCACTaGCCTTTCCCTAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: FYIYSILSSQQLPEEGESGLLGH*PFPRRS
Trigger: GGACCTTCTAGGGAAAGGGCAGTGACCCAGAAGCCC...GCTCTCGCCTTCTTCAGGGAGTTGCTGGGAGGACAAAATGGAGTATATGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS-3UTR CCA 90 bp TTTACATATACTCCATTTTGTCCTCCCAGCAACTCCCTGAAGAAGGCGAGAGCCTGGTCATGGAGCCAATaGGTAGGTATGTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: FTYTPFCPPSNSLKKARAWSWSQ*VGMWVQ
Trigger: CTGGACCCACATACCTACCCATTGGCTCCATGACCA...GGCTCTCGCCTTCTTCAGGGAGTTGCTGGGAGGACAAAATGGAGTATATGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421760.2
3UTR CAA 72 bp CTAGAAGGTCCCTTGCCATCTCAGACTGCATGGGACTaGCTTTATCACCAGTGTATACCACACACGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LEGPLPSQTAWD*LYHQCIPHTRL
Trigger: AAGCCTCGTGTGTGGTATACACTGGTGATAAAGCAAGTCCCATGCAGTCTGAGATGGCAAGGGACCTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS-3UTR CCA 90 bp CCATCTCAGACTGCATGGGACTTGCTTTATCACCAGTGTATACCACACACGAGGATGAAATCGGCATTCTaGGTGAATGCTGTTCACGGG +
Preference number: 4 (lower is better)
Translates to: PSQTAWDLLYHQCIPHTRMKSAF*VNAVHG
Trigger: CCCGTGAACAGCATTCACCCAGAATGCCGATTTCAT...CCTCGTGTGTGGTATACACTGGTGATAAAGCAAGTCCCATGCAGTCTGAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS-3UTR CCA 90 bp CCTTTCCCTAGAAGGTCCCTTGCCATCTCAGACTGCATGGGACTTGCTTTATCACCATCTCAGACTGCATaGGACTTGCTTTATCACCAG +
Preference number: 4 (lower is better)
Translates to: PFPRRSLAISDCMGLALSPSQTA*DLLYHQ
Trigger: CTGGTGATAAAGCAAGTCCCATGCAGTCTGAGATGG...TGATAAAGCAAGTCCCATGCAGTCTGAGATGGCAAGGGACCTTCTAGGGAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS-3UTR TCA 90 bp CATTCATTTTTAAGGGAAAAGTGGAGTCAAATGTGCTCAGAACAACTGAGTCCCGTTAAAGACACCTGCTaGCCACTGGGTCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: HSFLREKWSQMCSEQLSPVKDTC*PLGPAS
Trigger: GGAAGCAGGACCCAGTGGTCAGCAGGTGTCTTTAAC...GGGACTCAGTTGTTCTGAGCACATTTGACTCCACTTTTCCCTTAAAAATGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp CTTGCCATCTCAGACTGCATGGGACTTGCTTTATCACCAGTGTATACCACACACTTTAAACCTCCGGCGTaGATGAGGATGAATCCCTTT +
Preference number: 4 (lower is better)
Translates to: LAISDCMGLALSPVYTTHFKPPA*MRMNPF
Trigger: AAAGGGATTCATCCTCATTCACGCCGGAGGTTTAAA...GTGTGTGGTATACACTGGTGATAAAGCAAGTCCCATGCAGTCTGAGATGGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS-3UTR GCA 90 bp CCTTGCCATCTCAGACTGCATGGGACTTGCTTTATCACCAGTGTATACCACACACTTGCCATCTCAGACTaGATGGGACTTGCTTTATCA +
Preference number: 4 (lower is better)
Translates to: PCHLRLHGTCFITSVYHTLAISD*MGLALS
Trigger: TGATAAAGCAAGTCCCATGCAGTCTGAGATGGCAAG...TGTGTGGTATACACTGGTGATAAAGCAAGTCCCATGCAGTCTGAGATGGCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS-3UTR CCA 90 bp AGATTATCTAAATGCTGGAGTTTAAATCGAGTCAATGACAACACGACTCCAATTGGCAAAACAGCCCTGTaGAGTTGGGTGGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RLSKCWSLNRVNDNTTPIGKTAL*SWVGQG
Trigger: GCCCTGCCCCACCCAACTCCACAGGGCTGTTTTGCC...AATTGGAGTCGTGTTGTCATTGACTCGATTTAAACTCCAGCATTTAGATAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR TCA 90 bp GCCATCTCAGACTGCATGGGACTTGCTTTATCACCAGTGTATACCACACACGAGACACGAGGCTTCCTGTaGCTTAATTTCTCAATGATT +
Preference number: 4 (lower is better)
Translates to: AISDCMGLALSPVYTTHETRGFL*LNFSMI
Trigger: AATCATTGAGAAATTAAGTCACAGGAAGCCTCGTGT...CTCGTGTGTGGTATACACTGGTGATAAAGCAAGTCCCATGCAGTCTGAGATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS-3UTR CCA 90 bp ATGACTTTTACATATACTCCATTTTGTCCTCCCAGCAACTCCCTGAAGAAGGCGATGAATCCCTTTGTATaGCCTTTGTGTTTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: MTFTYTPFCPPSNSLKKAMNPFV*PLCFSV
Trigger: AACAGAAAAACACAAAGGCCATACAAAGGGATTCAT...CGCCTTCTTCAGGGAGTTGCTGGGAGGACAAAATGGAGTATATGTAAAAGTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS-3UTR GCA 90 bp CATCAATTAAATTTCAAGAGACTCTTACGACATGCTCCCCCTTATCTAGGAAATAGACTGCATGGGACTTaGTTTATCACCAGTGTATAC +
Preference number: 4 (lower is better)
Translates to: HQLNFKRLLRHAPPYLGNRLHGT*FITSVY
Trigger: GTATACACTGGTGATAAAGCAAGTCCCATGCAGTCT...ATTTCCTAGATAAGGGGGAGCATGTCGTAAGAGTCTCTTGAAATTTAATTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS-3UTR CAA 90 bp GCCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACGGTCTCTCCCACATaGGCAGGCCGCCAGCACGTG +
Preference number: 5 (lower is better)
Translates to: AGVSAPQKPRTVGLPPRPTVSPT*AGRQHV
Trigger: CACGTGCTGGCGGCCTGCCAATGTGGGAGAGACCGT...CGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000402066.5
CDS-3UTR CAA 90 bp CGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGGCGCCCTCCGAGCCGTaGCGGGAGAAGGAGGAACCG +
Preference number: 5 (lower is better)
Translates to: RLSPAEAPNRGPPAASDRAPSEP*REKEEP
Trigger: CGGTTCCTCCTTCTCCCGCAACGGCTCGGAGGGCGC...CCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CAA 90 bp GTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCGCGCCCTCCGAGCCGTaGCGGGAGAAGGAGGAACCG +
Preference number: 5 (lower is better)
Translates to: VSAPQKPRTVGLPPRPTGAPSEP*REKEEP
Trigger: CGGTTCCTCCTTCTCCCGCAACGGCTCGGAGGGCGC...GCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CAA 90 bp CGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACGGCTCCCCTATTCTCTaGGGCCGGGCGCAGTGGCTC +
Preference number: 5 (lower is better)
Translates to: RRLSPAEAPNRGPPAASDGSPIL*GRAQWL
Trigger: GAGCCACTGCGCCCGGCCCAAGAGAATAGGGGAGCC...GTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CAA 90 bp AGCCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCCAGCTGTCCCGACCTTaGACATCGCGCCCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SRRLSPAEAPNRGPPAASQLSRP*TSRPSW
Trigger: CCAGCTGGGGCGCGATGTCAAAGGTCGGGACAGCTG...GGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CAA 90 bp CGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCGCCAGCACGTGATGTaGTCCCAGACGCCACTGCAG +
Preference number: 5 (lower is better)
Translates to: RLSPAEAPNRGPPAASDRRQHVM*SQTPLQ
Trigger: CTGCAGTGGCGTCTGGGACAACATCACGTGCTGGCG...CCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000402066.5
CDS-3UTR CAA 90 bp TCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGACCGAGGTCTCCGTTaGCAGGAAGGACTGGGCGCG +
Preference number: 5 (lower is better)
Translates to: SQPRRSPEPWASRRVRQADRGLR*QEGLGA
Trigger: CGCGCCCAGTCCTTCCTGCAAACGGAGACCTCGGTC...TGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CAA 90 bp TGCAGCAGAGGGGTGTGGCCGGCGTGGCCCAGGGTGTGCAGGACAGGGTGCGGACCAGGGCTGGGCAGCTaGCTGAGGTCCATCGAGCGC +
Preference number: 5 (lower is better)
Translates to: CSRGVWPAWPRVCRTGCGPGLGS*LRSIER
Trigger: GCGCTCGATGGACCTCAGCAAGCTGCCCAGCCCTGG...TCCGCACCCTGTCCTGCACACCCTGGGCCACGCCGGCCACACCCCTCTGCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CAA 90 bp GCAGGGCTCAGCCGGGCCGGGTGGGCGCCCCAAGAGAGAGGACGGGCTGCCCTCGCGGACCTTTGGGGATaGAGGGGTCTCTGGACACTG +
Preference number: 5 (lower is better)
Translates to: AGLSRAGWAPQERGRAALADLWG*RGLWTL
Trigger: CAGTGTCCAGAGACCCCTCAATCCCCAAAGGTCCGC...GAGGGCAGCCCGTCCTCTCTCTTGGGGCGCCCACCCGGCCCGGCTGAGCCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CAA 90 bp CCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGAGTGGCACATGTGCGGTaGAGGGGAGATTGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: PASQPRRSPEPWASRRVRVAHVR*RGDCPL
Trigger: CAGGGGACAATCTCCCCTCAACCGCACATGTGCCAC...TCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS GCA 90 bp GTCTCCGTTTGCAGGAAGGACTGGGCGCGGGAGCCGCGGTGGAACTaGAGGGCGCCCTCCGAGCCGTTGCGGGAGAAGGAGGAACCGCAG +
Preference number: 5 (lower is better)
Translates to: VSVCRKDWAREPRWN*RAPSEPLREKEEPQ
Trigger: CTGCGGTTCCTCCTTCTCCCGCAACGGCTCGGAGGGCGCCCTGCAGTTCCACCGCGGCTCCCGCGCCCAGTCCTTCCTGCAAACGGAGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS CCA 90 bp CGCGTCCAGGAAGAAACGATCCCGTTTCCAGCAAACCCCGGACGGTaGGGCGCGGGGAAGGGCGCAGGCAGCCTCCCAACCCGAGTCCCG +
Preference number: 5 (lower is better)
Translates to: RVQEETIPFPANPGR*GAGKGAGSLPTRVP
Trigger: CGGGACTCGGGTTGGGAGGCTGCCTGCGCCCTTCCCCGCGCCCCACCGTCCGGGGTTTGCTGGAAACGGGATCGTTTCTTCCTGGACGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402066.5
CDS-3UTR CAA 90 bp TCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCACGCCAGCACGTGATGTaGTCCCAGACGCCACTGCAG +
Preference number: 5 (lower is better)
Translates to: SQPRRSPEPWASRRVRQARQHVM*SQTPLQ
Trigger: CTGCAGTGGCGTCTGGGACAACATCACGTGCTGGCG...TGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000402066.5
CDS-3UTR CAA 90 bp GCCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGGCACACTGTGGTCGTTaGTATCCCAGCAACCGGTGT +
Preference number: 5 (lower is better)
Translates to: AGVSAPQKPRTVGLPPRPAHCGR*YPSNRC
Trigger: ACACCGGTTGCTGGGATACAAACGACCACAGTGTGC...CGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CAA 90 bp CGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGAGCGCCCTCCGAGCCGTaGCGGGAGAAGGAGGAACCG +
Preference number: 5 (lower is better)
Translates to: RHGARASGRRKPASQPRRAPSEP*REKEEP
Trigger: CGGTTCCTCCTTCTCCCGCAACGGCTCGGAGGGCGC...TCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR CAA 90 bp CAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGCGGGCTGCCCTCCTGTaGATTTCTCCTGGTCCTAAC +
Preference number: 5 (lower is better)
Translates to: QPRRSPEPWASRRVRQAGRAALL*ISPGPN
Trigger: GTTAGGACCAGGAGAAATCAACAGGAGGGCAGCCCG...CCCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS CCA 90 bp ACCGAGGTCTCCGTTTGCAGGAAGGACTGGGCGCGGGAGCCGCGGTaGAACTGCAGGGCGCCCTCCGAGCCGTTGCGGGAGAAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: TEVSVCRKDWAREPR*NCRAPSEPLREKEE
Trigger: TTCCTCCTTCTCCCGCAACGGCTCGGAGGGCGCCCTGCAGTTCCACCGCGGCTCCCGCGCCCAGTCCTTCCTGCAAACGGAGACCTCGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CAA 90 bp CGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTGACCGAGGTCTCCGTTaGCAGGAAGGACTGGGCGCG +
Preference number: 5 (lower is better)
Translates to: RADLPDTVLGHLEGGSRRDRGLR*QEGLGA
Trigger: CGCGCCCAGTCCTTCCTGCAAACGGAGACCTCGGTC...ACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS-3UTR CAA 90 bp AGCCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCCCCAGAAATGGTGGGTaGTTCTGTAGATCCGACCGC +
Preference number: 5 (lower is better)
Translates to: SRRLSPAEAPNRGPPAASPRNGG*FCRSDR
Trigger: GCGGTCGGATCTACAGAACAACCCACCATTTCTGGG...GGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CAA 90 bp TGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGGCTCTCAGAGGTGATTaGGGGCAGGCCGCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: CPTRCSGIWKEEAGVSAPALRGD*GQAALG
Trigger: CCCCAGAGCGGCCTGCCCCAAATCACCTCTGAGAGC...CGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR CAA 90 bp CGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACCGAACGAGCTCATCGTaGACGCGTCCAGGAAGAAAC +
Preference number: 5 (lower is better)
Translates to: RRLSPAEAPNRGPPAASDRTSSS*TRPGRN
Trigger: GTTTCTTCCTGGACGCGTCAACGATGAGCTCGTTCG...GTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402066.5
CDS-3UTR CAA 90 bp CGGAGTCAGGACCGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAACGGTCTCTCCCACATaGGCAGGCCGCCAGCACGTG +
Preference number: 5 (lower is better)
Translates to: RSQDRADLPDTVLGHLEGTVSPT*AGRQHV
Trigger: CACGTGCTGGCGGCCTGCCAATGTGGGAGAGACCGT...TCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CAA 90 bp ACCGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCTGTGGGGGCCAGGGCTaGGCACACACATGGAGACTG +
Preference number: 5 (lower is better)
Translates to: TALTCPTRCSGIWKEEAGCGGQG*AHTWRL
Trigger: CAGTCTCCATGTGTGTGCCAAGCCCTGGCCCCCACA...GCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CAA 90 bp CGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTGCTCTCCTGATCTGGTaGTCTCCTCAGCCCGCCTTC +
Preference number: 5 (lower is better)
Translates to: RADLPDTVLGHLEGGSRRALLIW*SPQPAF
Trigger: GAAGGCGGGCTGAGGAGACAACCAGATCAGGAGAGC...ACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CAA 90 bp CCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCTGTGTCCTTGCAGGGTaGCAGGAGGGTTGGCGGGAT +
Preference number: 5 (lower is better)
Translates to: PARHGARASGRRKPASQPCVLAG*QEGWRD
Trigger: ATCCCGCCAACCCTCCTGCAACCCTGCAAGGACACA...GGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR CAA 90 bp CGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTGAGGCTGGTGTGTCCTaGCAGGGTTGCAGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: RADLPDTVLGHLEGGSRREAGVS*QGCRRV
Trigger: AACCCTCCTGCAACCCTGCAAGGACACACCAGCCTC...ACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR CAA 90 bp CGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCAGCCCCGCAGACTCTCTGTGGCCGCCTaGCTGTCCCCGTTCCCATCA +
Preference number: 5 (lower is better)
Translates to: RHGARASGRRKPASQPRRLSVAA*LSPFPS
Trigger: TGATGGGAACGGGGACAGCAAGGCGGCCACAGAGAG...TCTGCGGGGCTGAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS TCA 90 bp CCCGCAGCTCCCAGCTCCCGGGACGGCCCCGAACGAGCTCATCGTTaGCGCGTCCAGGAAGAAACGATCCCGTTTCCAGCAAACCCCGGA +
Preference number: 5 (lower is better)
Translates to: PAAPSSRDGPERAHR*RVQEETIPFPANPG
Trigger: TCCGGGGTTTGCTGGAAACGGGATCGTTTCTTCCTGGACGCGTCAACGATGAGCTCGTTCGGGGCCGTCCCGGGAGCTGGGAGCTGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402066.5
CDS-3UTR CAA 90 bp CCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGAAACAGTATCTGGTATTaGGAGGAGATGCTGATGGGA +
Preference number: 5 (lower is better)
Translates to: PASQPRRSPEPWASRRVRNSIWY*EEMLMG
Trigger: TCCCATCAGCATCTCCTCCAAATACCAGATACTGTT...TCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CAA 90 bp TCGAGCGCTGTGGGGGCCAGGGCTTGGCACACACATGGAGACTGTGCCCTGATAGACCGAGGTCTCCGTTaGCAGGAAGGACTGGGCGCG +
Preference number: 5 (lower is better)
Translates to: SSAVGARAWHTHGDCALIDRGLR*QEGLGA
Trigger: CGCGCCCAGTCCTTCCTGCAAACGGAGACCTCGGTC...TATCAGGGCACAGTCTCCATGTGTGTGCCAAGCCCTGGCCCCCACAGCGCTCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CAA 90 bp GACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCCCGACACGGTGCTCGACAGGGTGCGGACCTTaGGGGATTGAGGGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: DNQLDGVRTALTCPTRCSTGCGP*GIEGSL
Trigger: CAGAGACCCCTCAATCCCCAAAGGTCCGCACCCTGT...CGAGCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS TCA 90 bp CCCCGTTCCCATCACTCGATGAGCCAATGCCCTCGTGGCTGGCATTaGGCTTGGCACCTGCTGGGCCTGAGGACCATGAGGGGAGGCTTC +
Preference number: 5 (lower is better)
Translates to: PRSHHSMSQCPRGWH*AWHLLGLRTMRGGF
Trigger: GAAGCCTCCCCTCATGGTCCTCAGGCCCAGCAGGTGCCAAGCTCAATGCCAGCCACGAGGGCATTGGCTCATCGAGTGATGGGAACGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS GCA 90 bp AGGCTCCTCCTGGCACCCTGGGAGGCTGGTGTGTCCTTGCAGGGTTaGAGGAGGGTTGGCGGGATGATCAGATGGTGCCTCCCACAAAGG +
Preference number: 5 (lower is better)
Translates to: RLLLAPWEAGVSLQG*RRVGGMIRWCLPQR
Trigger: CCTTTGTGGGAGGCACCATCTGATCATCCCGCCAACCCTCCTGCAACCCTGCAAGGACACACCAGCCTCCCAGGGTGCCAGGAGGAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS GCA 90 bp GCCGTACTGTGTCCATGGCTGAGACCACCCTCTCTGTGGCCGCCTTaGTGTCCCCGTTCCCATCACTCGATGAGCCAATGCCCTCGTGGC +
Preference number: 5 (lower is better)
Translates to: AVLCPWLRPPSLWPP*CPRSHHSMSQCPRG
Trigger: GCCACGAGGGCATTGGCTCATCGAGTGATGGGAACGGGGACAGCAAGGCGGCCACAGAGAGGGTGGTCTCAGCCATGGACACAGTACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR CAA 90 bp AGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGGTTTGTGTTTTTCTGTTaGAGACCTCAGAAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: SPAEAPNRGPPAASDRQGFVFFC*RPQKLC
Trigger: GCAGAGCTTCTGAGGTCTCAAACAGAAAAACACAAA...CCCCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000402066.5
CDS-3UTR CAA 90 bp CAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGGAATTATGCTTCCTGTaGCAAGAGACATCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: QPRRSPEPWASRRVRQAGELCFL*QETSER
Trigger: TCTCTCTGATGTCTCTTGCAACAGGAAGCATAATTC...CCCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CAA 90 bp AGCCGGCGTCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGAATTATGCTTCCTGTaGCAAGAGACATCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: SRRLSPAEAPNRGPPAASELCFL*QETSER
Trigger: TCTCTCTGATGTCTCTTGCAACAGGAAGCATAATTC...GGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGACGCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CAA 90 bp GCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTCTCGCACACTGTGGTCGTTaGTATCCCAGCAACCGGTGT +
Preference number: 5 (lower is better)
Translates to: ADLPDTVLGHLEGGSRRLAHCGR*YPSNRC
Trigger: ACACCGGTTGCTGGGATACAAACGACCACAGTGTGC...GAGACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000377633.7
CDS TCA 90 bp GGGAGGCTGGTGTGTCCTTGCAGGGTTGCAGGAGGGTTGGCGGGATaGTCAGATGGTGCCTCCCACAAAGGCATCTGCAGTGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GRLVCPCRVAGGLAG*SDGASHKGICSASC
Trigger: GCAGCTGGCACTGCAGATGCCTTTGTGGGAGGCACCATCTGATCATCCCGCCAACCCTCCTGCAACCCTGCAAGGACACACCAGCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS CCA 90 bp GGCACCCTGGGAGGCTGGTGTGTCCTTGCAGGGTTGCAGGAGGGTTaGCGGGATGATCAGATGGTGCCTCCCACAAAGGCATCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: GTLGGWCVLAGLQEG*RDDQMVPPTKASAV
Trigger: CACTGCAGATGCCTTTGTGGGAGGCACCATCTGATCATCCCGCCAACCCTCCTGCAACCCTGCAAGGACACACCAGCCTCCCAGGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS CCA 90 bp GCCTTGCTGTCCCCGTTCCCATCACTCGATGAGCCAATGCCCTCGTaGCTGGCATTGAGCTTGGCACCTGCTGGGCCTGAGGACCATGAG +
Preference number: 5 (lower is better)
Translates to: ALLSPFPSLDEPMPS*LALSLAPAGPEDHE
Trigger: CTCATGGTCCTCAGGCCCAGCAGGTGCCAAGCTCAATGCCAGCCACGAGGGCATTGGCTCATCGAGTGATGGGAACGGGGACAGCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR CAA 90 bp CAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGGAAGCTCTGCACATTTaGTTTCTTCCTCCTGTATTT +
Preference number: 5 (lower is better)
Translates to: QPRRSPEPWASRRVRQAGEALHI*FLPPVF
Trigger: AAATACAGGAGGAAGAAACAAAATGTGCAGAGCTTC...CCCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000402066.5
CDS-3UTR CAA 90 bp TCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAGGGAATTATGCTTCCTGTaGCAAGAGACATCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: SAPQKPRTVGLPPRPTGRELCFL*QETSER
Trigger: TCTCTCTGATGTCTCTTGCAACAGGAAGCATAATTC...CCTGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CAA 90 bp TCTCAGCCCCGCAGAAGCCCCGAACCGTGGGCCTCCCGCCGCGTCCGACAGGCAAACAGTATCTGGTATTaGGAGGAGATGCTGATGGGA +
Preference number: 5 (lower is better)
Translates to: SQPRRSPEPWASRRVRQANSIWY*EEMLMG
Trigger: TCCCATCAGCATCTCCTCCAAATACCAGATACTGTT...TGCCTGTCGGACGCGGCGGGAGGCCCACGGTTCGGGGCTTCTGCGGGGCTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS CCA 90 bp GATGCTTCCGCCGTACTGTGTCCATGGCTGAGACCACCCTCTCTGTaGCCGCCTTGCTGTCCCCGTTCCCATCACTCGATGAGCCAATGC +
Preference number: 5 (lower is better)
Translates to: DASAVLCPWLRPPSL*PPCCPRSHHSMSQC
Trigger: GCATTGGCTCATCGAGTGATGGGAACGGGGACAGCAAGGCGGCCACAGAGAGGGTGGTCTCAGCCATGGACACAGTACGGCGGAAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS-3UTR CAA 90 bp CACCCTTCGCCTGAAGGAGCAGCCGCTAGGGCTGCTGAGCGCCAGCTCTGGGGATTCCACATTTCCTCCTaGGCTCCCCTATTCTCTTGG +
Preference number: 5 (lower is better)
Translates to: HPSPEGAAARAAERQLWGFHISS*APLFSW
Trigger: CCAAGAGAATAGGGGAGCCAAGGAGGAAATGTGGAA...TCCCCAGAGCTGGCGCTCAGCAGCCCTAGCGGCTGCTCCTTCAGGCGAAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CAA 90 bp TTAGTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCCCGACACGGAGTCCAGGGATGAGCTaGTTGCAGCAGAGGGGTGTG +
Preference number: 5 (lower is better)
Translates to: LVDNQLDGVRTALTCPTRSPGMS*LQQRGV
Trigger: CACACCCCTCTGCTGCAACAAGCTCATCCCTGGACT...CCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS CCA 90 bp TGTGGTCGTTTGTATCCCAGCAACCGGTGTCTTCTAAGTAGAGCCTaGCCGCAGTCCATGCACCGATGCAGACGGTGGGGAGGCCCCATC +
Preference number: 5 (lower is better)
Translates to: CGRLYPSNRCLLSRA*PQSMHRCRRWGGPI
Trigger: GATGGGGCCTCCCCACCGTCTGCATCGGTGCATGGACTGCGGCCAGGCTCTACTTAGAAGACACCGGTTGCTGGGATACAAACGACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CAA 90 bp CGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGTTTTGTGTTTTTCTGTTaGAGACCTCAGAAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: RADLPDTVLGHLEGGSRRFVFFC*RPQKLC
Trigger: GCAGAGCTTCTGAGGTCTCAAACAGAAAAACACAAA...ACGCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CAA 90 bp ACCGCGCTGACCTGCCCGACACGGTGCTCGGGCATCTGGAAGGAGGAAGCCGGCGAAGCTCTGCACATTTaGTTTCTTCCTCCTGTATTT +
Preference number: 5 (lower is better)
Translates to: TALTCPTRCSGIWKEEAGEALHI*FLPPVF
Trigger: AAATACAGGAGGAAGAAACAAAATGTGCAGAGCTTC...GCCGGCTTCCTCCTTCCAGATGCCCGAGCACCGTGTCGGGCAGGTCAGCGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CAA 90 bp GTGGACAACCAGCTTGACGGAGTCAGGACCGCGCTGACCTGCCCGACACGGTGCTCTGGGGAGGAGGGCTaGAAACAGTTTTATATGTTG +
Preference number: 5 (lower is better)
Translates to: VDNQLDGVRTALTCPTRCSGEEG*KQFYML
Trigger: CAACATATAAAACTGTTTCAAGCCCTCCTCCCCAGA...GCACCGTGTCGGGCAGGTCAGCGCGGTCCTGACTCCGTCAAGCTGGTTGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CAA 90 bp ACTGGGTCCTGCTTCCCCTGCTCACCAGGCATCTGTCAGGAAACAGCCGGCCCCAACAGTATCTGGTATTaGGAGGAGATGCTGATGGGA +
Preference number: 5 (lower is better)
Translates to: TGSCFPCSPGICQETAGPNSIWY*EEMLMG
Trigger: TCCCATCAGCATCTCCTCCAAATACCAGATACTGTT...GGGGCCGGCTGTTTCCTGACAGATGCCTGGTGAGCAGGGGAAGCAGGACCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CAA 90 bp GGTCACTGCCCTTTCCCTAGAAGGTCCCTTGCCATCTCAGACTGCATGGGACTTTCCCTAGAAGGTCCCTaGCCATCTCAGACTGCATGG +
Preference number: 5 (lower is better)
Translates to: GHCPFPRRSLAISDCMGLSLEGP*PSQTAW
Trigger: CCATGCAGTCTGAGATGGCAAGGGACCTTCTAGGGA...AAGTCCCATGCAGTCTGAGATGGCAAGGGACCTTCTAGGGAAAGGGCAGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS CCA 90 bp ACCACCAGGCCCTGGAACGACCCGAGGCACAGCTCAAACAGTATCTaGTATTTGGAGGAGATGCTGATGGGAAACACGGCAAACACCATG +
Preference number: 5 (lower is better)
Translates to: TTRPWNDPRHSSNSI*YLEEMLMGNTANTM
Trigger: CATGGTGTTTGCCGTGTTTCCCATCAGCATCTCCTCCAAATACCAGATACTGTTTGAGCTGTGCCTCGGGTCGTTCCAGGGCCTGGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS-3UTR CAA 90 bp TCACACTGGGGAGGAGACCAGGTTCACAGAGGGGAGGAAACACACTCTGACCACCAGACTGCATGGGACTaGCTTTATCACCAGTGTATA +
Preference number: 5 (lower is better)
Translates to: SHWGGDQVHRGEETHSDHQTAWD*LYHQCI
Trigger: TATACACTGGTGATAAAGCAAGTCCCATGCAGTCTG...GTGGTCAGAGTGTGTTTCCTCCCCTCTGTGAACCTGGTCTCCTCCCCAGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS TCA 90 bp CGGGTCGCTGTAGCCACAGGCATCGACGAAATCTGGGAACGTCTCTaGCCATCCGTCACTCGTACAGTTTTTGCTTATGTTTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: RVAVATGIDEIWERL*PSVTRTVFAYVSCF
Trigger: AAAGCAGGAAACATAAGCAAAAACTGTACGAGTGACGGATGGTCAGAGACGTTCCCAGATTTCGTCGATGCCTGTGGCTACAGCGACCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000402066.5
CDS-3UTR CAA 90 bp TTTACATATACTCCATTTTGTCCTCCCAGCAACTCCCTGAAGAAGGCGAGAGCCTACATATACTCCATTTaGTCCTCCCAGCAACTCCCT +
Preference number: 5 (lower is better)
Translates to: FTYTPFCPPSNSLKKARAYIYSI*SSQQLP
Trigger: AGGGAGTTGCTGGGAGGACAAAATGGAGTATATGTA...GGCTCTCGCCTTCTTCAGGGAGTTGCTGGGAGGACAAAATGGAGTATATGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS-3UTR CAA 90 bp GCCATCTCAGACTGCATGGGACTTGCTTTATCACCAGTGTATACCACACACGAGGAAGCTCTGCACATTTaGTTTCTTCCTCCTGTATTT +
Preference number: 5 (lower is better)
Translates to: AISDCMGLALSPVYTTHEEALHI*FLPPVF
Trigger: AAATACAGGAGGAAGAAACAAAATGTGCAGAGCTTC...CTCGTGTGTGGTATACACTGGTGATAAAGCAAGTCCCATGCAGTCTGAGATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS-3UTR CAA 90 bp CATTCATTTTTAAGGGAAAAGTGGAGTCAAATGTGCTCAGAACAACTGAGTCCCCCGGGGATATGGGTTTaGCAAACCAAGGTGACACTG +
Preference number: 5 (lower is better)
Translates to: HSFLREKWSQMCSEQLSPPGIWV*QTKVTL
Trigger: CAGTGTCACCTTGGTTTGCAAAACCCATATCCCCGG...GGGACTCAGTTGTTCTGAGCACATTTGACTCCACTTTTCCCTTAAAAATGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS-3UTR CAA 90 bp TCAATGACAACACGACTCCAATTCCAGGTATGGGGTTTAGTGGACAACCAGCTTAGTTACCACAAATCTTaGTTTCCTCAAAAACCTGAG +
Preference number: 5 (lower is better)
Translates to: SMTTRLQFQVWGLVDNQLSYHKS*FPQKPE
Trigger: CTCAGGTTTTTGAGGAAACAAAGATTTGTGGTAACT...AAGCTGGTTGTCCACTAAACCCCATACCTGGAATTGGAGTCGTGTTGTCATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262178.7
CDS TCA 72 bp AGGCATCTGCGGCCAACGCCAACCCCGATCTCCCCGTaGAACGCGCAGCCCGCGCAGGCGCCCGCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: RHLRPTPTPISP*NAQPAQAPAAP
Trigger: GGGAGCTGCGGGCGCCTGCGCGGGCTGCGCGTTTCACGGGGAGATCGGGGTTGGCGTTGGCCGCAGATGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402066.5
CDS GCA 72 bp TGCAGGAAGGACTGGGCGCGGGAGCCGCGGTGGAACTaGAGGGCGCCCTCCGAGCCGTTGCGGGAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: CRKDWAREPRWN*RAPSEPLREKE
Trigger: CTCCTTCTCCCGCAACGGCTCGGAGGGCGCCCTGCAGTTCCACCGCGGCTCCCGCGCCCAGTCCTTCCTGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS CCA 72 bp TCCGTTTGCAGGAAGGACTGGGCGCGGGAGCCGCGGTaGAACTGCAGGGCGCCCTCCGAGCCGTTGCGGGAG +
Preference number: 6 (lower is better)
Translates to: SVCRKDWAREPR*NCRAPSEPLRE
Trigger: CTCCCGCAACGGCTCGGAGGGCGCCCTGCAGTTCCACCGCGGCTCCCGCGCCCAGTCCTTCCTGCAAACGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS CAA 90 bp CGCGTCCGACAGGCAGGGGTGGGGCTAGATGACCGAGGTCTCCGTTaGCAGGAAGGACTGGGCGCGGGAGCCGCGGTGGAACTGCAGGGC +
Preference number: 6 (lower is better)
Translates to: RVRQAGVGLDDRGLR*QEGLGAGAAVELQG
Trigger: GCCCTGCAGTTCCACCGCGGCTCCCGCGCCCAGTCCTTCCTGCAAACGGAGACCTCGGTCATCTAGCCCCACCCCTGCCTGTCGGACGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS GCA 72 bp AGCCGCGGTGGAACTGCAGGGCGCCCTCCGAGCCGTTaGGGGAGAAGGAGGAACCGCAGACCCTGTAATCCC +
Preference number: 6 (lower is better)
Translates to: SRGGTAGRPPSR*GRRRNRRPCNP
Trigger: GGGATTACAGGGTCTGCGGTTCCTCCTTCTCCCGCAACGGCTCGGAGGGCGCCCTGCAGTTCCACCGCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS CCA 72 bp GAAGAAACGATCCCGTTTCCAGCAAACCCCGGACGGTaGGGCGCGGGGAAGGGCGCAGGCAGCCTCCCAACC +
Preference number: 6 (lower is better)
Translates to: EETIPFPANPGR*GAGKGAGSLPT
Trigger: GGTTGGGAGGCTGCCTGCGCCCTTCCCCGCGCCCCACCGTCCGGGGTTTGCTGGAAACGGGATCGTTTCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402066.5
CDS CAA 72 bp CAGGCAGGGGTGGGGCTAGATGACCGAGGTCTCCGTTaGCAGGAAGGACTGGGCGCGGGAGCCGCGGTGGAA +
Preference number: 6 (lower is better)
Translates to: QAGVGLDDRGLR*QEGLGAGAAVE
Trigger: TTCCACCGCGGCTCCCGCGCCCAGTCCTTCCTGCAAACGGAGACCTCGGTCATCTAGCCCCACCCCTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS CAA 90 bp GCCCGCAGCTCCCAGCTCCCGGGACGGCCCCGAACGAGCTCATCGTaGACGCGTCCAGGAAGAAACGATCCCGTTTCCAGCAAACCCCGG +
Preference number: 6 (lower is better)
Translates to: ARSSQLPGRPRTSSS*TRPGRNDPVSSKPR
Trigger: CCGGGGTTTGCTGGAAACGGGATCGTTTCTTCCTGGACGCGTCAACGATGAGCTCGTTCGGGGCCGTCCCGGGAGCTGGGAGCTGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402066.5
CDS CAA 90 bp GTCTCTGGCAGGCTCCTCCTGGCACCCTGGGAGGCTGGTGTGTCCTaGCAGGGTTGCAGGAGGGTTGGCGGGATGATCAGATGGTGCCTC +
Preference number: 6 (lower is better)
Translates to: VSGRLLLAPWEAGVS*QGCRRVGGMIRWCL
Trigger: GAGGCACCATCTGATCATCCCGCCAACCCTCCTGCAACCCTGCAAGGACACACCAGCCTCCCAGGGTGCCAGGAGGAGCCTGCCAGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS TCA 72 bp CCCAGCTCCCGGGACGGCCCCGAACGAGCTCATCGTTaGCGCGTCCAGGAAGAAACGATCCCGTTTCCAGCA +
Preference number: 6 (lower is better)
Translates to: PSSRDGPERAHR*RVQEETIPFPA
Trigger: TGCTGGAAACGGGATCGTTTCTTCCTGGACGCGTCAACGATGAGCTCGTTCGGGGCCGTCCCGGGAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402066.5
CDS GCA 72 bp CTGGCACCCTGGGAGGCTGGTGTGTCCTTGCAGGGTTaGAGGAGGGTTGGCGGGATGATCAGATGGTGCCTC +
Preference number: 6 (lower is better)
Translates to: LAPWEAGVSLQG*RRVGGMIRWCL
Trigger: GAGGCACCATCTGATCATCCCGCCAACCCTCCTGCAACCCTGCAAGGACACACCAGCCTCCCAGGGTGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS CAA 72 bp CCTGGCACCCTGGGAGGCTGGTGTGTCCTTGCAGGGTaGCAGGAGGGTTGGCGGGATGATCAGATGGTGCCT +
Preference number: 6 (lower is better)
Translates to: PGTLGGWCVLAG*QEGWRDDQMVP
Trigger: AGGCACCATCTGATCATCCCGCCAACCCTCCTGCAACCCTGCAAGGACACACCAGCCTCCCAGGGTGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS CAA 72 bp TCCCAGCTCCCGGGACGGCCCCGAACGAGCTCATCGTaGACGCGTCCAGGAAGAAACGATCCCGTTTCCAGC +
Preference number: 6 (lower is better)
Translates to: SQLPGRPRTSSS*TRPGRNDPVSS
Trigger: GCTGGAAACGGGATCGTTTCTTCCTGGACGCGTCAACGATGAGCTCGTTCGGGGCCGTCCCGGGAGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402066.5
CDS CAA 90 bp CAGGCTCCTCCTGGCACCCTGGGAGGCTGGTGTGTCCTTGCAGGGTaGCAGGAGGGTTGGCGGGATGATCAGATGGTGCCTCCCACAAAG +
Preference number: 6 (lower is better)
Translates to: QAPPGTLGGWCVLAG*QEGWRDDQMVPPTK
Trigger: CTTTGTGGGAGGCACCATCTGATCATCCCGCCAACCCTCCTGCAACCCTGCAAGGACACACCAGCCTCCCAGGGTGCCAGGAGGAGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS CAA 90 bp CGCCGTACTGTGTCCATGGCTGAGACCACCCTCTCTGTGGCCGCCTaGCTGTCCCCGTTCCCATCACTCGATGAGCCAATGCCCTCGTGG +
Preference number: 6 (lower is better)
Translates to: RRTVSMAETTLSVAA*LSPFPSLDEPMPSW
Trigger: CCACGAGGGCATTGGCTCATCGAGTGATGGGAACGGGGACAGCAAGGCGGCCACAGAGAGGGTGGTCTCAGCCATGGACACAGTACGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS CAA 90 bp TCCCCGTTCCCATCACTCGATGAGCCAATGCCCTCGTGGCTGGCATaGAGCTTGGCACCTGCTGGGCCTGAGGACCATGAGGGGAGGCTT +
Preference number: 6 (lower is better)
Translates to: SPFPSLDEPMPSWLA*SLAPAGPEDHEGRL
Trigger: AAGCCTCCCCTCATGGTCCTCAGGCCCAGCAGGTGCCAAGCTCAATGCCAGCCACGAGGGCATTGGCTCATCGAGTGATGGGAACGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS TCA 72 bp TGTGGCCGCCTTGCTGTCCCCGTTCCCATCACTCGATaGGCCAATGCCCTCGTGGCTGGCATTGAGCTTGGC +
Preference number: 6 (lower is better)
Translates to: CGRLAVPVPITR*ANALVAGIELG
Trigger: GCCAAGCTCAATGCCAGCCACGAGGGCATTGGCTCATCGAGTGATGGGAACGGGGACAGCAAGGCGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS GCA 72 bp CTTCTAAGTAGAGCCTGGCCGCAGTCCATGCACCGATaGAGACGGTGGGGAGGCCCCATCCGATCAGGAGGT +
Preference number: 6 (lower is better)
Translates to: LLSRAWPQSMHR*RRWGGPIRSGG
Trigger: ACCTCCTGATCGGATGGGGCCTCCCCACCGTCTGCATCGGTGCATGGACTGCGGCCAGGCTCTACTTAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS CCA 72 bp TCCCCGTTCCCATCACTCGATGAGCCAATGCCCTCGTaGCTGGCATTGAGCTTGGCACCTGCTGGGCCTGAG +
Preference number: 6 (lower is better)
Translates to: SPFPSLDEPMPS*LALSLAPAGPE
Trigger: CTCAGGCCCAGCAGGTGCCAAGCTCAATGCCAGCCACGAGGGCATTGGCTCATCGAGTGATGGGAACGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS GCA 72 bp CAGGGTTGCAGGAGGGTTGGCGGGATGATCAGATGGTaGCTCCCACAAAGGCATCTGCAGTGCCAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: QGCRRVGGMIRW*LPQRHLQCQLL
Trigger: CAGCAGCTGGCACTGCAGATGCCTTTGTGGGAGGCACCATCTGATCATCCCGCCAACCCTCCTGCAACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS GCA 72 bp TGTCCATGGCTGAGACCACCCTCTCTGTGGCCGCCTTaGTGTCCCCGTTCCCATCACTCGATGAGCCAATGC +
Preference number: 6 (lower is better)
Translates to: CPWLRPPSLWPP*CPRSHHSMSQC
Trigger: GCATTGGCTCATCGAGTGATGGGAACGGGGACAGCAAGGCGGCCACAGAGAGGGTGGTCTCAGCCATGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS CAA 72 bp CCATCACTCGATGAGCCAATGCCCTCGTGGCTGGCATaGAGCTTGGCACCTGCTGGGCCTGAGGACCATGAG +
Preference number: 6 (lower is better)
Translates to: PSLDEPMPSWLA*SLAPAGPEDHE
Trigger: CTCATGGTCCTCAGGCCCAGCAGGTGCCAAGCTCAATGCCAGCCACGAGGGCATTGGCTCATCGAGTGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS CAA 72 bp GTGTCCATGGCTGAGACCACCCTCTCTGTGGCCGCCTaGCTGTCCCCGTTCCCATCACTCGATGAGCCAATG +
Preference number: 6 (lower is better)
Translates to: VSMAETTLSVAA*LSPFPSLDEPM
Trigger: CATTGGCTCATCGAGTGATGGGAACGGGGACAGCAAGGCGGCCACAGAGAGGGTGGTCTCAGCCATGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS TCA 72 bp TGCCTCCCACAAAGGCATCTGCAGTGCCAGCTGCTGTaGTCTTTGTCACCAGGGATGGGAGCCCTGGGGAGT +
Preference number: 6 (lower is better)
Translates to: CLPQRHLQCQLL*SLSPGMGALGS
Trigger: ACTCCCCAGGGCTCCCATCCCTGGTGACAAAGATCACAGCAGCTGGCACTGCAGATGCCTTTGTGGGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS CCA 72 bp TTGCAGGGTTGCAGGAGGGTTGGCGGGATGATCAGATaGTGCCTCCCACAAAGGCATCTGCAGTGCCAGCTG +
Preference number: 6 (lower is better)
Translates to: LQGCRRVGGMIR*CLPQRHLQCQL
Trigger: CAGCTGGCACTGCAGATGCCTTTGTGGGAGGCACCATCTGATCATCCCGCCAACCCTCCTGCAACCCTGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS TCA 72 bp GTGTGTCCTTGCAGGGTTGCAGGAGGGTTGGCGGGATaGTCAGATGGTGCCTCCCACAAAGGCATCTGCAGT +
Preference number: 6 (lower is better)
Translates to: VCPCRVAGGLAG*SDGASHKGICS
Trigger: ACTGCAGATGCCTTTGTGGGAGGCACCATCTGATCATCCCGCCAACCCTCCTGCAACCCTGCAAGGACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377633.7
CDS CCA 72 bp TTGTATCCCAGCAACCGGTGTCTTCTAAGTAGAGCCTaGCCGCAGTCCATGCACCGATGCAGACGGTGGGGA +
Preference number: 6 (lower is better)
Translates to: LYPSNRCLLSRA*PQSMHRCRRWG
Trigger: TCCCCACCGTCTGCATCGGTGCATGGACTGCGGCCAGGCTCTACTTAGAAGACACCGGTTGCTGGGATACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS CAA 72 bp GTCTCTCCCACATTGGCAGGCCGCCAGCACGTGATGTaGTCCCAGACGCCACTGCAGGCTTTGTGTTTTTCT +
Preference number: 6 (lower is better)
Translates to: VSPTLAGRQHVM*SQTPLQALCFS
Trigger: AGAAAAACACAAAGCCTGCAGTGGCGTCTGGGACAACATCACGTGCTGGCGGCCTGCCAATGTGGGAGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000402066.5
CDS GCA 72 bp TGGACTTGGCCAGCCTCTTGTACTGAGACTGGTCGTTaGCGCCGACATCTGGGGATGTTAACTTCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: WTWPASCTETGR*RRHLGMLTSAA
Trigger: TGCTGCAGAAGTTAACATCCCCAGATGTCGGCGGCAACGACCAGTCTCAGTACAAGAGGCTGGCCAAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS CCA 72 bp AAAATCGGTATTCGTATGACCCACCAGGGCACACTGTaGTCGTTTGTATCCCAGCAACCGGTGTCTTCTAAG +
Preference number: 6 (lower is better)
Translates to: KIGIRMTHQGTL*SFVSQQPVSSK
Trigger: CTTAGAAGACACCGGTTGCTGGGATACAAACGACCACAGTGTGCCCTGGTGGGTCATACGAATACCGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262178.7
ENST00000377633.7
ENST00000402066.5
CDS TCA 72 bp GTAGCCACAGGCATCGACGAAATCTGGGAACGTCTCTaGCCATCCGTCACTCGTACAGTTTTTGCTTATGTT +
Preference number: 6 (lower is better)
Translates to: VATGIDEIWERL*PSVTRTVFAYV
Trigger: AACATAAGCAAAAACTGTACGAGTGACGGATGGTCAGAGACGTTCCCAGATTTCGTCGATGCCTGTGGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000402066.5
CDS TCA 72 bp GTATGTGGGTCCAGGATCCTCTTTAAACCTCCGGCGTaGATGAGGATGAATCCCTTTGTATGGCCTTTGTGT +
Preference number: 6 (lower is better)
Translates to: VCGSRILFKPPA*MRMNPFVWPLC
Trigger: ACACAAAGGCCATACAAAGGGATTCATCCTCATTCACGCCGGAGGTTTAAAGAGGATCCTGGACCCACATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421760.2
CDS CAA 90 bp AGGCTTTGTGTTTTTCTGTTTGAGACCTCAGAAGCTCTGCACATTTaGTTTCTTCCTCCTGTATTTCCAGATGAAATCGGCATTCTGGGT +
Preference number: 6 (lower is better)
Translates to: RLCVFLFETSEALHI*FLPPVFPDEIGILG
Trigger: ACCCAGAATGCCGATTTCATCTGGAAATACAGGAGGAAGAAACAAAATGTGCAGAGCTTCTGAGGTCTCAAACAGAAAAACACAAAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262178.7
ENST00000402066.5
CDS CAA 72 bp GATGAATCCCTTTGTATGGCCTTTGTGTTTTTCTGTTaGAGACCTCAGAAGCTCTGCACATTTTGTTTCTTC +
Preference number: 6 (lower is better)
Translates to: DESLCMAFVFFC*RPQKLCTFCFF
Trigger: GAAGAAACAAAATGTGCAGAGCTTCTGAGGTCTCAAACAGAAAAACACAAAGGCCATACAAAGGGATTCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421760.2