Pregenerated sensors for VIP (Homo sapiens)
Ensembl gene IDs: ENSG00000146469Ensembl transcript IDs: ENST00000367243.7, ENST00000367244.8, ENST00000431366.1
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR CCA 90 bp | TTTTACACATACTTAACACAAGCAGAAAGGGAAGTTTCAGTGTCAGAAGCAGGGCCTTCAAGAATTCACTaGGAAGTTGTCATCAGCTTT | + |
Preference number: 2 (lower is better) Translates to: FYTYLTQAEREVSVSEAGPSRIH*EVVISF Trigger: AAAGCTGATGACAACTTCCCAGTGAATTCTTGAAGG...CCCTGCTTCTGACACTGAAACTTCCCTTTCTGCTTGTGTTAAGTATGTGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR GCA 90 bp | TTTTACACATACTTAACACAAGCAGAAAGGGAAGTTTCAGTGTCAGAAGCAGGGCCTCTCGCCCAGTCGTaGTCCCCCGGAGCTGACTGT | + |
Preference number: 4 (lower is better) Translates to: FYTYLTQAEREVSVSEAGPLAQS*SPGADC Trigger: ACAGTCAGCTCCGGGGGAGCACGACTGGGCGAGAGG...CCCTGCTTCTGACACTGAAACTTCCCTTTCTGCTTGTGTTAAGTATGTGTAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR TCA 90 bp | CCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTTGCTCCAAAGGTCTTTTTCTTCTGTCACCCAACCTaGGAGCAGAAGGTGCCCTGT | + |
Preference number: 4 (lower is better) Translates to: PSRIHWEVVISFAPKVFFFCHPT*EQKVPC Trigger: ACAGGGCACCTTCTGCTCTCAGGTTGGGTGACAGAA...GAAAAAGACCTTTGGAGCAAAGCTGATGACAACTTCCCAGTGAATTCTTGAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR GCA 90 bp | CCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTTGCTCCAAAGGTCTTTTTCTGGTGTCCATTTCTGTaGCTCTCGCCCAGTCGTGCT | + |
Preference number: 4 (lower is better) Translates to: PSRIHWEVVISFAPKVFFWCPFL*LSPSRA Trigger: AGCACGACTGGGCGAGAGGCACAGAAATGGACACCA...GAAAAAGACCTTTGGAGCAAAGCTGATGACAACTTCCCAGTGAATTCTTGAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR TCA 90 bp | TTTTACACATACTTAACACAAGCAGAAAGGGAAGTTTCAGTGTCAGAAGCAGGGGTGCTCCCCCGGAGCTaGCTGTTCTGGTTTGTTTTG | + |
Preference number: 4 (lower is better) Translates to: FYTYLTQAEREVSVSEAGVLPRS*LFWFVL Trigger: CAAAACAAACCAGAACAGTCAGCTCCGGGGGAGCAC...CCCTGCTTCTGACACTGAAACTTCCCTTTCTGCTTGTGTTAAGTATGTGTAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR TCA 90 bp | TTTTACACATACTTAACACAAGCAGAAAGGGAAGTTTCAGTGTCAGAAGCAGGGTTCTGTCACCCAACCTaGGAGCAGAAGGTGCCCTGT | + |
Preference number: 4 (lower is better) Translates to: FYTYLTQAEREVSVSEAGFCHPT*EQKVPC Trigger: ACAGGGCACCTTCTGCTCTCAGGTTGGGTGACAGAA...CCCTGCTTCTGACACTGAAACTTCCCTTTCTGCTTGTGTTAAGTATGTGTAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR GCA 90 bp | TTTTACACATACTTAACACAAGCAGAAAGGGAAGTTTCAGTGTCAGAAGCAGGGCCTGAGAGCAGAAGGTaGCCTGTAAAGAGGCCATGC | + |
Preference number: 4 (lower is better) Translates to: FYTYLTQAEREVSVSEAGPESRR*PVKRPC Trigger: GCATGGCCTCTTTACAGGGCACCTTCTGCTCTCAGG...CCCTGCTTCTGACACTGAAACTTCCCTTTCTGCTTGTGTTAAGTATGTGTAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR TCA 90 bp | CCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTTGCTCCAAAGGTCTTTTTCGTGAGAAGAGCACACTaGGAAGAGTCAGGAGCACAA | + |
Preference number: 4 (lower is better) Translates to: PSRIHWEVVISFAPKVFFVRRAH*EESGAQ Trigger: TTGTGCTCCTGACTCTTCTCAGTGTGCTCTTCTCAC...GAAAAAGACCTTTGGAGCAAAGCTGATGACAACTTCCCAGTGAATTCTTGAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR TCA 90 bp | TTTTACACATACTTAACACAAGCAGAAAGGGAAGTTTCAGTGTCAGAAGCAGGGCCATGCCGAAGTCTGTaGGAAGAGCACACTGAGAAG | + |
Preference number: 4 (lower is better) Translates to: FYTYLTQAEREVSVSEAGPCRSL*EEHTEK Trigger: CTTCTCAGTGTGCTCTTCTCACAGACTTCGGCATGG...CCCTGCTTCTGACACTGAAACTTCCCTTTCTGCTTGTGTTAAGTATGTGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR TCA 90 bp | CCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTTGCTCCAAAGGTCTTTTTCCATCTGAGTGACGTTTaGCTGGTACAGGGTCTTCTG | + |
Preference number: 4 (lower is better) Translates to: PSRIHWEVVISFAPKVFFHLSDV*LVQGLL Trigger: CAGAAGACCCTGTACCAGTCAAACGTCACTCAGATG...GAAAAAGACCTTTGGAGCAAAGCTGATGACAACTTCCCAGTGAATTCTTGAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR GCA 90 bp | CCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTTGCTCCAAAGGTCTTTTTCTTGGCTGTTACTGCCTaGTGGTGCTTCTCACTCTAC | + |
Preference number: 4 (lower is better) Translates to: PSRIHWEVVISFAPKVFFLAVTA*WCFSLY Trigger: GTAGAGTGAGAAGCACCAGCAGGCAGTAACAGCCAA...GAAAAAGACCTTTGGAGCAAAGCTGATGACAACTTCCCAGTGAATTCTTGAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR CCA 90 bp | TTTTACACATACTTAACACAAGCAGAAAGGGAAGTTTCAGTGTCAGAAGCAGGGGCAATGGCTAAGGGTTaGCTGTTACTGCCTGCTGGT | + |
Preference number: 4 (lower is better) Translates to: FYTYLTQAEREVSVSEAGAMAKG*LLLPAG Trigger: ACCAGCAGGCAGTAACAGCCAACCCTTAGCCATTGC...CCCTGCTTCTGACACTGAAACTTCCCTTTCTGCTTGTGTTAAGTATGTGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR CCA 90 bp | CCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTTGCTCCAAAGGTCTTTTTCGCTGGGCCTTATTTCTaGTGTCCATTTCTGTGCCTC | + |
Preference number: 4 (lower is better) Translates to: PSRIHWEVVISFAPKVFFAGPYF*CPFLCL Trigger: GAGGCACAGAAATGGACACCAGAAATAAGGCCCAGC...GAAAAAGACCTTTGGAGCAAAGCTGATGACAACTTCCCAGTGAATTCTTGAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR CCA 90 bp | TTTTACACATACTTAACACAAGCAGAAAGGGAAGTTTCAGTGTCAGAAGCAGGGAGGAGCACAAGGAGCTaGGCCTTATTTCTGGTGTCC | + |
Preference number: 4 (lower is better) Translates to: FYTYLTQAEREVSVSEAGRSTRS*ALFLVS Trigger: GGACACCAGAAATAAGGCCCAGCTCCTTGTGCTCCT...CCCTGCTTCTGACACTGAAACTTCCCTTTCTGCTTGTGTTAAGTATGTGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR TCA 90 bp | CCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTTGCTCCAAAGGTCTTTTTCAGTGAAGACTGCATCTaGGTGACGTTTGACTGGTAC | + |
Preference number: 4 (lower is better) Translates to: PSRIHWEVVISFAPKVFFSEDCI*VTFDWY Trigger: GTACCAGTCAAACGTCACTCAGATGCAGTCTTCACT...GAAAAAGACCTTTGGAGCAAAGCTGATGACAACTTCCCAGTGAATTCTTGAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR TCA 90 bp | CCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTTGCTCCAAAGGTCTTTTTCGGGTATAGTTGTCAGTaGAGACTGCATCTGAGTGAC | + |
Preference number: 4 (lower is better) Translates to: PSRIHWEVVISFAPKVFFGYSCQ*RLHLSD Trigger: GTCACTCAGATGCAGTCTTCACTGACAACTATACCC...GAAAAAGACCTTTGGAGCAAAGCTGATGACAACTTCCCAGTGAATTCTTGAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR GCA 90 bp | TTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTTGGTGTCCATTTCTGTaGCTCTCGCCCAGTCGTGCT | + |
Preference number: 4 (lower is better) Translates to: LCCVSFSFKNSLGSCHQLWCPFL*LSPSRA Trigger: AGCACGACTGGGCGAGAGGCACAGAAATGGACACCA...AAGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR GCA 90 bp | ATTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTCCTGAGAGCAGAAGGTaGCCTGTAAAGAGGCCATGC | + |
Preference number: 4 (lower is better) Translates to: IMLRIIFLQEFTGKLSSAPESRR*PVKRPC Trigger: GCATGGCCTCTTTACAGGGCACCTTCTGCTCTCAGG...AGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR TCA 90 bp | TTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTCCATGCCGAAGTCTGTaGGAAGAGCACACTGAGAAG | + |
Preference number: 4 (lower is better) Translates to: LCCVSFSFKNSLGSCHQLPCRSL*EEHTEK Trigger: CTTCTCAGTGTGCTCTTCTCACAGACTTCGGCATGG...AAGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR TCA 90 bp | TTTTACACATACTTAACACAAGCAGAAAGGGAAGTTTCAGTGTCAGAAGCAGGGAGTGAAGACTGCATCTaGGTGACGTTTGACTGGTAC | + |
Preference number: 4 (lower is better) Translates to: FYTYLTQAEREVSVSEAGSEDCI*VTFDWY Trigger: GTACCAGTCAAACGTCACTCAGATGCAGTCTTCACT...CCCTGCTTCTGACACTGAAACTTCCCTTTCTGCTTGTGTTAAGTATGTGTAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR TCA 90 bp | TTTTACACATACTTAACACAAGCAGAAAGGGAAGTTTCAGTGTCAGAAGCAGGGGGGTATAGTTGTCAGTaGAGACTGCATCTGAGTGAC | + |
Preference number: 4 (lower is better) Translates to: FYTYLTQAEREVSVSEAGGYSCQ*RLHLSD Trigger: GTCACTCAGATGCAGTCTTCACTGACAACTATACCC...CCCTGCTTCTGACACTGAAACTTCCCTTTCTGCTTGTGTTAAGTATGTGTAAAA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR GCA 90 bp | ATTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTAGGGTTGGCTGTTACTaGCTGCTGGTGCTTCTCACT | + |
Preference number: 4 (lower is better) Translates to: IMLRIIFLQEFTGKLSSARVGCY*LLVLLT Trigger: AGTGAGAAGCACCAGCAGGCAGTAACAGCCAACCCT...AGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR GCA 90 bp | TTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTAGGGTTGGCTGTTACTaGCTGCTGGTGCTTCTCACT | + |
Preference number: 4 (lower is better) Translates to: LCCVSFSFKNSLGSCHQLRVGCY*LLVLLT Trigger: AGTGAGAAGCACCAGCAGGCAGTAACAGCCAACCCT...AAGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR CCA 90 bp | ATTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTGCAATGGCTAAGGGTTaGCTGTTACTGCCTGCTGGT | + |
Preference number: 4 (lower is better) Translates to: IMLRIIFLQEFTGKLSSAAMAKG*LLLPAG Trigger: ACCAGCAGGCAGTAACAGCCAACCCTTAGCCATTGC...AGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR CCA 90 bp | ATTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTAGGAGCACAAGGAGCTaGGCCTTATTTCTGGTGTCC | + |
Preference number: 4 (lower is better) Translates to: IMLRIIFLQEFTGKLSSARSTRS*ALFLVS Trigger: GGACACCAGAAATAAGGCCCAGCTCCTTGTGCTCCT...AGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR CCA 90 bp | ATTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTGCTGTTACTGCCTGCTaGTGCTTCTCACTCTACCCT | + |
Preference number: 4 (lower is better) Translates to: IMLRIIFLQEFTGKLSSAAVTAC*CFSLYP Trigger: AGGGTAGAGTGAGAAGCACCAGCAGGCAGTAACAGC...AGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367244.8 |
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CDS-3UTR TCA 90 bp | ATTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTAGCTGTCTTAGGTGCTaGAGTCCTGGGAGTAAGAGA | + |
Preference number: 4 (lower is better) Translates to: IMLRIIFLQEFTGKLSSASCLRC*SPGSKR Trigger: TCTCTTACTCCCAGGACTTCAGCACCTAAGACAGCT...AGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR TCA 90 bp | TTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTAGCTGTCTTAGGTGCTaGAGTCCTGGGAGTAAGAGA | + |
Preference number: 4 (lower is better) Translates to: LCCVSFSFKNSLGSCHQLSCLRC*SPGSKR Trigger: TCTCTTACTCCCAGGACTTCAGCACCTAAGACAGCT...AAGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR TCA 90 bp | ATTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTGTGAGAAGAGCACACTaGGAAGAGTCAGGAGCACAA | + |
Preference number: 4 (lower is better) Translates to: IMLRIIFLQEFTGKLSSAVRRAH*EESGAQ Trigger: TTGTGCTCCTGACTCTTCTCAGTGTGCTCTTCTCAC...AGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR TCA 90 bp | CCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTTGCTCCAAAGGTCTTTTTCTGGTACAGGGTCTTCTaGGATGTTACTAACACGTTT | + |
Preference number: 4 (lower is better) Translates to: PSRIHWEVVISFAPKVFFWYRVF*DVTNTF Trigger: AAACGTGTTAGTAACATCTCAGAAGACCCTGTACCA...GAAAAAGACCTTTGGAGCAAAGCTGATGACAACTTCCCAGTGAATTCTTGAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367243.7 |
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CDS-3UTR TCA 90 bp | TTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTCATCTGAGTGACGTTTaGCTGGTACAGGGTCTTCTG | + |
Preference number: 4 (lower is better) Translates to: LCCVSFSFKNSLGSCHQLHLSDV*LVQGLL Trigger: CAGAAGACCCTGTACCAGTCAAACGTCACTCAGATG...AAGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR TCA 90 bp | ATTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTAAGACTGCATCTGAGTaGCGTTTGACTGGTACAGGG | + |
Preference number: 4 (lower is better) Translates to: IMLRIIFLQEFTGKLSSAKTASE*RLTGTG Trigger: CCCTGTACCAGTCAAACGTCACTCAGATGCAGTCTT...AGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR GCA 90 bp | TTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTTTGGCTGTTACTGCCTaGTGGTGCTTCTCACTCTAC | + |
Preference number: 4 (lower is better) Translates to: LCCVSFSFKNSLGSCHQLLAVTA*WCFSLY Trigger: GTAGAGTGAGAAGCACCAGCAGGCAGTAACAGCCAA...AAGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR GCA 90 bp | CCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTTGCTCCAAAGGTCTTTTTCAAAACTCCATCAGCATaGCTGGCATTTCTGGATACA | + |
Preference number: 4 (lower is better) Translates to: PSRIHWEVVISFAPKVFFKTPSA*LAFLDT Trigger: TGTATCCAGAAATGCCAGGCATGCTGATGGAGTTTT...GAAAAAGACCTTTGGAGCAAAGCTGATGACAACTTCCCAGTGAATTCTTGAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR CCA 90 bp | TTTTACACATACTTAACACAAGCAGAAAGGGAAGTTTCAGTGTCAGAAGCAGGGCTCCATCAGCATGCCTaGCATTTCTGGATACATCAT | + |
Preference number: 4 (lower is better) Translates to: FYTYLTQAEREVSVSEAGLHQHA*HFWIHH Trigger: ATGATGTATCCAGAAATGCCAGGCATGCTGATGGAG...CCCTGCTTCTGACACTGAAACTTCCCTTTCTGCTTGTGTTAAGTATGTGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR TCA 90 bp | TTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTAGTGAAGACTGCATCTaGGTGACGTTTGACTGGTAC | + |
Preference number: 4 (lower is better) Translates to: LCCVSFSFKNSLGSCHQLSEDCI*VTFDWY Trigger: GTACCAGTCAAACGTCACTCAGATGCAGTCTTCACT...AAGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR TCA 90 bp | ATTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTGGGTATAGTTGTCAGTaGAGACTGCATCTGAGTGAC | + |
Preference number: 4 (lower is better) Translates to: IMLRIIFLQEFTGKLSSAGYSCQ*RLHLSD Trigger: GTCACTCAGATGCAGTCTTCACTGACAACTATACCC...AGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR TCA 90 bp | CCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTTGCTCCAAAGGTCTTTTTCAGAAGGAAGCTCATATaGCCAAAGCAATATTCTGAG | + |
Preference number: 4 (lower is better) Translates to: PSRIHWEVVISFAPKVFFRRKLI*PKQYSE Trigger: CTCAGAATATTGCTTTGGTCATATGAGCTTCCTTCT...GAAAAAGACCTTTGGAGCAAAGCTGATGACAACTTCCCAGTGAATTCTTGAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR TCA 90 bp | TTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTTGGTACAGGGTCTTCTaGGATGTTACTGCTAACACG | + |
Preference number: 4 (lower is better) Translates to: LCCVSFSFKNSLGSCHQLWYRVF*DVTANT Trigger: CGTGTTAGCAGTAACATCTCAGAAGACCCTGTACCA...AAGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR GCA 90 bp | TTTTACACATACTTAACACAAGCAGAAAGGGAAGTTTCAGTGTCAGAAGCAGGGAAAACTCCATCAGCATaGCTGGCATTTCTGGATACA | + |
Preference number: 4 (lower is better) Translates to: FYTYLTQAEREVSVSEAGKTPSA*LAFLDT Trigger: TGTATCCAGAAATGCCAGGCATGCTGATGGAGTTTT...CCCTGCTTCTGACACTGAAACTTCCCTTTCTGCTTGTGTTAAGTATGTGTAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR CCA 90 bp | CCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTTGCTCCAAAGGTCTTTTTCACTCAAGGTACTTTTTaGCAGAAAGTTGACCCAAGA | + |
Preference number: 4 (lower is better) Translates to: PSRIHWEVVISFAPKVFFTQGTF*QKVDPR Trigger: TCTTGGGTCAACTTTCTGCCAAAAAGTACCTTGAGT...GAAAAAGACCTTTGGAGCAAAGCTGATGACAACTTCCCAGTGAATTCTTGAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR CCA 90 bp | ATTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTCTCCATCAGCATGCCTaGCATTTCTGGATACATCAT | + |
Preference number: 4 (lower is better) Translates to: IMLRIIFLQEFTGKLSSALHQHA*HFWIHH Trigger: ATGATGTATCCAGAAATGCCAGGCATGCTGATGGAG...AGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR CCA 90 bp | TTTTACACATACTTAACACAAGCAGAAAGGGAAGTTTCAGTGTCAGAAGCAGGGACTCAAGGTACTTTTTaGCAGAAAGTTGACCCAAGA | + |
Preference number: 4 (lower is better) Translates to: FYTYLTQAEREVSVSEAGTQGTF*QKVDPR Trigger: TCTTGGGTCAACTTTCTGCCAAAAAGTACCTTGAGT...CCCTGCTTCTGACACTGAAACTTCCCTTTCTGCTTGTGTTAAGTATGTGTAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR TCA 90 bp | TTTTACACATACTTAACACAAGCAGAAAGGGAAGTTTCAGTGTCAGAAGCAGGGTCTGTTCTACTCTCCTaGATAGTTAAGTACACTCTA | + |
Preference number: 4 (lower is better) Translates to: FYTYLTQAEREVSVSEAGSVLLS*IVKYTL Trigger: TAGAGTGTACTTAACTATTCAGGAGAGTAGAACAGA...CCCTGCTTCTGACACTGAAACTTCCCTTTCTGCTTGTGTTAAGTATGTGTAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR GCA 90 bp | TTTTACACATACTTAACACAAGCAGAAAGGGAAGTTTCAGTGTCAGAAGCAGGGAGTTGTCATCAGCTTTaGTCCAAAGGTCTTTTTCAT | + |
Preference number: 4 (lower is better) Translates to: FYTYLTQAEREVSVSEAGSCHQL*SKGLFH Trigger: ATGAAAAAGACCTTTGGAGCAAAGCTGATGACAACT...CCCTGCTTCTGACACTGAAACTTCCCTTTCTGCTTGTGTTAAGTATGTGTAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR CCA 90 bp | ATTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTCATGCCTGGCATTTCTaGATACATCATAATAGGGTG | + |
Preference number: 4 (lower is better) Translates to: IMLRIIFLQEFTGKLSSAHAWHF*IHHNRV Trigger: CACCCTATTATGATGTATCCAGAAATGCCAGGCATG...AGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR TCA 90 bp | ATTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTAGAAGGAAGCTCATATaGCCAAAGCAATATTCTGAG | + |
Preference number: 4 (lower is better) Translates to: IMLRIIFLQEFTGKLSSARRKLI*PKQYSE Trigger: CTCAGAATATTGCTTTGGTCATATGAGCTTCCTTCT...AGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR CCA 90 bp | TTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTACTCAAGGTACTTTTTaGCAGAAAGTTGACCCAAGA | + |
Preference number: 4 (lower is better) Translates to: LCCVSFSFKNSLGSCHQLTQGTF*QKVDPR Trigger: TCTTGGGTCAACTTTCTGCCAAAAAGTACCTTGAGT...AAGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR CCA 90 bp | TTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTCCTTCAAGAATTCACTaGGAAGTTGTCATCAGCTTT | + |
Preference number: 4 (lower is better) Translates to: LCCVSFSFKNSLGSCHQLPSRIH*EVVISF Trigger: AAAGCTGATGACAACTTCCCAGTGAATTCTTGAAGG...AAGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR TCA 90 bp | ATTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTCTGTTCTACTCTCCTaGATAGTTAAGTACACTCTA | + |
Preference number: 4 (lower is better) Translates to: IMLRIIFLQEFTGKLSSASVLLS*IVKYTL Trigger: TAGAGTGTACTTAACTATTCAGGAGAGTAGAACAGA...AGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR GCA 90 bp | TTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTAGTTGTCATCAGCTTTaGTCCAAAGGTCTTTTTCAT | + |
Preference number: 4 (lower is better) Translates to: LCCVSFSFKNSLGSCHQLSCHQL*SKGLFH Trigger: ATGAAAAAGACCTTTGGAGCAAAGCTGATGACAACT...AAGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS TCA 90 bp | CCTGAGAGCAGAAGGTGCCCTGTAAAGAGGCCATGCCGAAGTCTGTaGGAAGAGCACACTGAGAAGAGTCAGGAGCACAAGGAGCTGGGC | + |
Preference number: 5 (lower is better) Translates to: PESRRCPVKRPCRSL*EEHTEKSQEHKELG Trigger: GCCCAGCTCCTTGTGCTCCTGACTCTTCTCAGTGTGCTCTTCTCACAGACTTCGGCATGGCCTCTTTACAGGGCACCTTCTGCTCTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS TCA 90 bp | GTGCCCTGTAAAGAGGCCATGCCGAAGTCTGTGAGAAGAGCACACTaGGAAGAGTCAGGAGCACAAGGAGCTGGGCCTTATTTCTGGTGT | + |
Preference number: 5 (lower is better) Translates to: VPCKEAMPKSVRRAH*EESGAQGAGPYFWC Trigger: ACACCAGAAATAAGGCCCAGCTCCTTGTGCTCCTGACTCTTCTCAGTGTGCTCTTCTCACAGACTTCGGCATGGCCTCTTTACAGGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR CAA 90 bp | CCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTTGCTCCAAAGGTCTTTTTCATCAGGAGAGAGCCTTaGGTGATTAGCAATCCAAAT | + |
Preference number: 5 (lower is better) Translates to: PSRIHWEVVISFAPKVFFIRREP*VISNPN Trigger: ATTTGGATTGCTAATCACCAAAGGCTCTCTCCTGAT...GAAAAAGACCTTTGGAGCAAAGCTGATGACAACTTCCCAGTGAATTCTTGAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR CAA 90 bp | ATTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTCTTGATCAGGTTCATTaGCTCCCTCAAAGGGTATTC | + |
Preference number: 5 (lower is better) Translates to: IMLRIIFLQEFTGKLSSALDQVH*LPQRVF Trigger: GAATACCCTTTGAGGGAGCAAATGAACCTGATCAAG...AGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR CAA 90 bp | TTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTCTTGATCAGGTTCATTaGCTCCCTCAAAGGGTATTC | + |
Preference number: 5 (lower is better) Translates to: LCCVSFSFKNSLGSCHQLLDQVH*LPQRVF Trigger: GAATACCCTTTGAGGGAGCAAATGAACCTGATCAAG...AAGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS-3UTR CAA 90 bp | TTTTACACATACTTAACACAAGCAGAAAGGGAAGTTTCAGTGTCAGAAGCAGGGAAGTTGTCATCAGCTTaGCTCCAAAGGTCTTTTTCA | + |
Preference number: 5 (lower is better) Translates to: FYTYLTQAEREVSVSEAGKLSSA*LQRSFS Trigger: TGAAAAAGACCTTTGGAGCAAAGCTGATGACAACTT...CCCTGCTTCTGACACTGAAACTTCCCTTTCTGCTTGTGTTAAGTATGTGTAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR CAA 90 bp | TTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTGAATTCACTGGGAAGTaGTCATCAGCTTTGCTCCAA | + |
Preference number: 5 (lower is better) Translates to: LCCVSFSFKNSLGSCHQLEFTGK*SSALLQ Trigger: TTGGAGCAAAGCTGATGACAACTTCCCAGTGAATTC...AAGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR CAA 90 bp | ATTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTGAATTCACTGGGAAGTaGTCATCAGCTTTGCTCCAA | + |
Preference number: 5 (lower is better) Translates to: IMLRIIFLQEFTGKLSSAEFTGK*SSALLQ Trigger: TTGGAGCAAAGCTGATGACAACTTCCCAGTGAATTC...AGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR CAA 90 bp | TTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTATCAGGAGAGAGCCTTaGGTGATTAGCAATCCAAAT | + |
Preference number: 5 (lower is better) Translates to: LCCVSFSFKNSLGSCHQLIRREP*VISNPN Trigger: ATTTGGATTGCTAATCACCAAAGGCTCTCTCCTGAT...AAGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR CAA 90 bp | ATTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTTTCTTTACAGCCATTaGTTTTCTAAGGCGGGTATA | + |
Preference number: 5 (lower is better) Translates to: IMLRIIFLQEFTGKLSSAFLYSH*FSKAGI Trigger: TATACCCGCCTTAGAAAACAAATGGCTGTAAAGAAA...AGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS-3UTR CAA 90 bp | TTATGTTGCGTATCATTTTCCTTCAAGAATTCACTGGGAAGTTGTCATCAGCTTTTTCTTTACAGCCATTaGTTTTCTAAGGCGGGTATA | + |
Preference number: 5 (lower is better) Translates to: LCCVSFSFKNSLGSCHQLFLYSH*FSKAGI Trigger: TATACCCGCCTTAGAAAACAAATGGCTGTAAAGAAA...AAGCTGATGACAACTTCCCAGTGAATTCTTGAAGGAAAATGATACGCAACATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000367243.7 ENST00000367244.8 ENST00000431366.1 |
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CDS CCA 72 bp | TCCACCAGTTCTCTGCCCTTAGCAATGGCTAAGGGTTaGCTGTTACTGCCTGCTGGTGCTTCTCACTCTACC | + |
Preference number: 6 (lower is better) Translates to: STSSLPLAMAKG*LLLPAGASHST Trigger: GGTAGAGTGAGAAGCACCAGCAGGCAGTAACAGCCAACCCTTAGCCATTGCTAAGGGCAGAGAACTGGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS TCA 72 bp | AAAGAGGCCATGCCGAAGTCTGTGAGAAGAGCACACTaGGAAGAGTCAGGAGCACAAGGAGCTGGGCCTTAT | + |
Preference number: 6 (lower is better) Translates to: KEAMPKSVRRAH*EESGAQGAGPY Trigger: ATAAGGCCCAGCTCCTTGTGCTCCTGACTCTTCTCAGTGTGCTCTTCTCACAGACTTCGGCATGGCCTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS TCA 72 bp | AGAAGGTGCCCTGTAAAGAGGCCATGCCGAAGTCTGTaGGAAGAGCACACTGAGAAGAGTCAGGAGCACAAG | + |
Preference number: 6 (lower is better) Translates to: RRCPVKRPCRSL*EEHTEKSQEHK Trigger: CTTGTGCTCCTGACTCTTCTCAGTGTGCTCTTCTCACAGACTTCGGCATGGCCTCTTTACAGGGCACCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |
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CDS CCA 72 bp | AAGAGCACACTGAGAAGAGTCAGGAGCACAAGGAGCTaGGCCTTATTTCTGGTGTCCATTTCTGTGCCTCTC | + |
Preference number: 6 (lower is better) Translates to: KSTLRRVRSTRS*ALFLVSISVPL Trigger: GAGAGGCACAGAAATGGACACCAGAAATAAGGCCCAGCTCCTTGTGCTCCTGACTCTTCTCAGTGTGCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367243.7 ENST00000367244.8 |