RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VIL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000127831

Ensembl transcript IDs: ENST00000248444.10, ENST00000392114.6, ENST00000419986.1, ENST00000440053.1, ENST00000454069.5

Found 437 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAACTAAACTGGTCTACTTCAAAAATAGTGGGCCTGTGTGAAGAGTaGGACCACATGTGGGTGTGCACACCTCTTGTCCCCAGGTTTCCC +
Preference number: 1 (lower is better)
Translates to: QLNWSTSKIVGLCEE*DHMWVCTPLVPRFP
Trigger: GGGAAACCTGGGGACAAGAGGTGTGCACACCCACATGTGGTCTCACTCTTCACACAGGCCCACTATTTTTGAAGTAGACCAGTTTAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR GCA 90 bp GAGTGGGTGAGGGTCTGGACCAGGTTCCAGGTTGGTCCAGTCAGATaGCAGAACAAAGAAGAACAGTCAACTAAACTGGTCTACTTCAAA +
Preference number: 1 (lower is better)
Translates to: EWVRVWTRFQVGPVR*QNKEEQSTKLVYFK
Trigger: TTTGAAGTAGACCAGTTTAGTTGACTGTTCTTCTTTGTTCTGGCATCTGACTGGACCAACCTGGAACCTGGTCCAGACCCTCACCCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR CCA 90 bp AGTATAGGTATGTCCATTGGCATAAGAATAGAGTGGGTGAGGGTCTaGACCAGGTTCCAGGTTGGTCCAGTCAGATGCCAGAACAAAGAA +
Preference number: 1 (lower is better)
Translates to: SIGMSIGIRIEWVRV*TRFQVGPVRCQNKE
Trigger: TTCTTTGTTCTGGCATCTGACTGGACCAACCTGGAACCTGGTCCAGACCCTCACCCACTCTATTCTTATGCCAATGGACATACCTATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR TCA 90 bp ACTAGGCTCTTGCTTTGCCTCATTATTAAGGGTTGGGAGAGGGAGTaGAGTAGCATATGCATTTCATACTTGCCTTTAGGTCTCAAGCCT +
Preference number: 1 (lower is better)
Translates to: TRLLLCLIIKGWERE*SSICISYLPLGLKP
Trigger: AGGCTTGAGACCTAAAGGCAAGTATGAAATGCATATGCTACTTCACTCCCTCTCCCAACCCTTAATAATGAGGCAAAGCAAGAGCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR TCA 90 bp ATCTCACTGCTCATGTACTTGCATGTTTGGGACTCAAATTTTACTTaGTGTCTGTCCATTCTTGTGGCCCTATCAGCCTTCTCCTTCCTT +
Preference number: 1 (lower is better)
Translates to: ISLLMYLHVWDSNFT*CLSILVALSAFSFL
Trigger: AAGGAAGGAGAAGGCTGATAGGGCCACAAGAATGGACAGACATCAAGTAAAATTTGAGTCCCAAACATGCAAGTACATGAGCAGTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR CCA 90 bp AAGGACACATTCTTGCTGATACTTGTAACAACCTGTTCAAAGTTGTaGAAATCACCTTCTGTTGGCTTTCTGACATGGACTTCCTTGCAG +
Preference number: 1 (lower is better)
Translates to: KDTFLLILVTTCSKL*KSPSVGFLTWTSLQ
Trigger: CTGCAAGGAAGTCCATGTCAGAAAGCCAACAGAAGGTGATTTCCACAACTTTGAACAGGTTGTTACAAGTATCAGCAAGAATGTGTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR TCA 90 bp CAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATaGGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCACAGCT +
Preference number: 1 (lower is better)
Translates to: QNFTSIGVGLISVRK*DPTIRVGYCFTTTA
Trigger: AGCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
3UTR CCA 90 bp TGCATGTTTGGGACTCAAATTTTACTTGATGTCTGTCCATTCTTGTaGCCCTATCAGCCTTCTCCTTCCTTTACTCCTTTAATCTACTTC +
Preference number: 1 (lower is better)
Translates to: CMFGTQILLDVCPFL*PYQPSPSFTPLIYF
Trigger: GAAGTAGATTAAAGGAGTAAAGGAAGGAGAAGGCTGATAGGGCCACAAGAATGGACAGACATCAAGTAAAATTTGAGTCCCAAACATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR CCA 90 bp CAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTaGTGTAGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAG +
Preference number: 1 (lower is better)
Translates to: QKFVLIGTSAKFHFN*CRTNIGEKMRPYNQ
Trigger: CTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
3UTR CCA 90 bp GATACTTGTAACAACCTGTTCAAAGTTGTGGAAATCACCTTCTGTTaGCTTTCTGACATGGACTTCCTTGCAGCACTGTTACTTCTTAAA +
Preference number: 1 (lower is better)
Translates to: DTCNNLFKVVEITFC*LSDMDFLAALLLLK
Trigger: TTTAAGAAGTAACAGTGCTGCAAGGAAGTCCATGTCAGAAAGCCAACAGAAGGTGATTTCCACAACTTTGAACAGGTTGTTACAAGTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR TCA 90 bp TATTTTGCTGTGTTTAACCACAATCATTCACCTTATGGCATGCTTTaGTTACTAGACTTCAGGCAGTCTCATTCATTGTATCATACTTAC +
Preference number: 1 (lower is better)
Translates to: YFAVFNHNHSPYGML*LLDFRQSHSLYHTY
Trigger: GTAAGTATGATACAATGAATGAGACTGCCTGAAGTCTAGTAATCAAAGCATGCCATAAGGTGAATGATTGTGGTTAAACACAGCAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR-3UTR TCA 90 bp ATCTACTTCTTTGACTACCAGTGGAGATTTCAGCTGGACTATGTTGATGGGGTTCATCTGAGGAGCCTGTaGAGCTTTGCAGAGGCTTCT +
Preference number: 2 (lower is better)
Translates to: IYFFDYQWRFQLDYVDGVHLRSL*SFAEAS
Trigger: AGAAGCCTCTGCAAAGCTTCACAGGCTCCTCAGATG...AACCCCATCAACATAGTCCAGCTGAAATCTCCACTGGTAGTCAAAGAAGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR-3UTR TCA 90 bp TGCTTCCGTTGCAGGCAGTTTGCACAATACCTAATTAACCTTCCTATTGAAAATGGCCTGTGTGAAGAGTaGGACCACATGTGGGTGTGC +
Preference number: 2 (lower is better)
Translates to: CFRCRQFAQYLINLPIENGLCEE*DHMWVC
Trigger: GCACACCCACATGTGGTCTCACTCTTCACACAGGCC...ATTTTCAATAGGAAGGTTAATTAGGTATTGTGCAAACTGCCTGCAACGGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR CAA 90 bp TGTGAAGCTTTGCAGAGGCTTCTGGGTAAGTTTGTAAACCTAGCATaGGCCTTCACTAGGCTCTTGCTTTGCCTCATTATTAAGGGTTGG +
Preference number: 2 (lower is better)
Translates to: CEALQRLLGKFVNLA*AFTRLLLCLIIKGW
Trigger: CCAACCCTTAATAATGAGGCAAAGCAAGAGCCTAGTGAAGGCCAATGCTAGGTTTACAAACTTACCCAGAAGCCTCTGCAAAGCTTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR-3UTR CCA 90 bp AATGAGATTCCTACACTTTGCCTAATTGAGCCACTACCAGGTTTTCTGGCAGCTGTTGGCTTTCTGACATaGACTTCCTTGCAGCACTGT +
Preference number: 2 (lower is better)
Translates to: NEIPTLCLIEPLPGFLAAVGFLT*TSLQHC
Trigger: ACAGTGCTGCAAGGAAGTCCATGTCAGAAAGCCAAC...AGCTGCCAGAAAACCTGGTAGTGGCTCAATTAGGCAAAGTGTAGGAATCTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR CAA 90 bp CACTGGTACTGTTTGGAATTTGTGAAACCTCTTAAGAGGGTAGTCTaGTGGACCATTCAACTCTCCTTCAGCCCTTTAACTTACCCACTG +
Preference number: 2 (lower is better)
Translates to: HWYCLEFVKPLKRVV*WTIQLSFSPLTYPL
Trigger: CAGTGGGTAAGTTAAAGGGCTGAAGGAGAGTTGAATGGTCCACAAGACTACCCTCTTAAGAGGTTTCACAAATTCCAAACAGTACCAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR-3UTR TCA 90 bp ATCTACTTCTTTGACTACCAGTGGAGATTTCAGCTGGACTATGTTGATGGGGTTGTGTGTGCACACTCATaGGTTTTGTCTCAGCAGGAT +
Preference number: 2 (lower is better)
Translates to: IYFFDYQWRFQLDYVDGVVCAHS*VLSQQD
Trigger: ATCCTGCTGAGACAAAACTCATGAGTGTGCACACAC...AACCCCATCAACATAGTCCAGCTGAAATCTCCACTGGTAGTCAAAGAAGTAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR CAA 90 bp TATCTCACTGCTCATGTACTTGCATGTTTGGGACTCAAATTTTACTaGATGTCTGTCCATTCTTGTGGCCCTATCAGCCTTCTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: YLTAHVLACLGLKFY*MSVHSCGPISLLLP
Trigger: AGGAAGGAGAAGGCTGATAGGGCCACAAGAATGGACAGACATCAAGTAAAATTTGAGTCCCAAACATGCAAGTACATGAGCAGTGAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR-3UTR TCA 90 bp ATCTACTTCTTTGACTACCAGTGGAGATTTCAGCTGGACTATGTTGATGGGGTTGGCCGTAGTCCCCATTaGTTCCTGTTATTTTCATCT +
Preference number: 2 (lower is better)
Translates to: IYFFDYQWRFQLDYVDGVGRSPH*FLLFSS
Trigger: AGATGAAAATAACAGGAATCAATGGGGACTACGGCC...AACCCCATCAACATAGTCCAGCTGAAATCTCCACTGGTAGTCAAAGAAGTAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR-3UTR GCA 90 bp TGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCATCAGGGTAGGGTACTaGTTTACAACCACAGCTACT +
Preference number: 2 (lower is better)
Translates to: WHLPQKFVLIGTSAKFHFIRVGY*FTTTAT
Trigger: AGTAGCTGTGGTTGTAAAGCAGTACCCTACCCTGAT...GAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
3UTR-3UTR GCA 90 bp CCTCAGGATAGAAACAATCTAGCGACCTTAGAAGTTGAAATGAGGACCATAGGCAACAAAACTGGCATTTaGCACAGAAGTTTGTGCTCA +
Preference number: 2 (lower is better)
Translates to: PQDRNNLATLEVEMRTIGNKTGI*HRSLCS
Trigger: TGAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTT...GCCTATGGTCCTCATTTCAACTTCTAAGGTCGCTAGATTGTTTCTATCCTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR CAA 90 bp GAAAAGGACACATTCTTGCTGATACTTGTAACAACCTGTTCAAAGTaGTGGAAATCACCTTCTGTTGGCTTTCTGACATGGACTTCCTTG +
Preference number: 2 (lower is better)
Translates to: EKDTFLLILVTTCSK*WKSPSVGFLTWTSL
Trigger: CAAGGAAGTCCATGTCAGAAAGCCAACAGAAGGTGATTTCCACAACTTTGAACAGGTTGTTACAAGTATCAGCAAGAATGTGTCCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR CAA 90 bp ACTTGCATGTTTGGGACTCAAATTTTACTTGATGTCTGTCCATTCTaGTGGCCCTATCAGCCTTCTCCTTCCTTTACTCCTTTAATCTAC +
Preference number: 2 (lower is better)
Translates to: TCMFGTQILLDVCPF*WPYQPSPSFTPLIY
Trigger: GTAGATTAAAGGAGTAAAGGAAGGAGAAGGCTGATAGGGCCACAAGAATGGACAGACATCAAGTAAAATTTGAGTCCCAAACATGCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR-3UTR TCA 90 bp GCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAAATATCGGTGAGAAAATaGGACCCTACAATCAGGGTA +
Preference number: 2 (lower is better)
Translates to: AFATEVCAHRHICKISLQISVRK*DPTIRV
Trigger: TACCCTGATTGTAGGGTCTCATTTTCTCACCGATAT...TTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
3UTR-3UTR TCA 90 bp TGCTTCCGTTGCAGGCAGTTTGCACAATACCTAATTAACCTTCCTATTGAAAATCCTTATGGCATGCTTTaGTTACTAGACTTCAGGCAG +
Preference number: 2 (lower is better)
Translates to: CFRCRQFAQYLINLPIENPYGML*LLDFRQ
Trigger: CTGCCTGAAGTCTAGTAATCAAAGCATGCCATAAGG...ATTTTCAATAGGAAGGTTAATTAGGTATTGTGCAAACTGCCTGCAACGGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR-3UTR GCA 90 bp TGCTTCCGTTGCAGGCAGTTTGCACAATACCTAATTAACCTTCCTATTGAAAATACTAGGCTCTTGCTTTaGCTCATTATTAAGGGTTGG +
Preference number: 2 (lower is better)
Translates to: CFRCRQFAQYLINLPIENTRLLL*LIIKGW
Trigger: CCAACCCTTAATAATGAGGCAAAGCAAGAGCCTAGT...ATTTTCAATAGGAAGGTTAATTAGGTATTGTGCAAACTGCCTGCAACGGAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR CAA 90 bp TCATGTGTGTATGGTTTAGAAGTACACTTACCTCAGAAACCTGATTaGATCTTCATGTCTTGGGCAGGAGTTGTTGAAAATAGGTTATTG +
Preference number: 2 (lower is better)
Translates to: SCVYGLEVHLPQKPD*IFMSWAGVVENRLL
Trigger: CAATAACCTATTTTCAACAACTCCTGCCCAAGACATGAAGATCAAATCAGGTTTCTGAGGTAAGTGTACTTCTAAACCATACACACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR TCA 72 bp TGGTCTACTTCAAAAATAGTGGGCCTGTGTGAAGAGTaGGACCACATGTGGGTGTGCACACCTCTTGTCCCC +
Preference number: 3 (lower is better)
Translates to: WSTSKIVGLCEE*DHMWVCTPLVP
Trigger: GGGGACAAGAGGTGTGCACACCCACATGTGGTCTCACTCTTCACACAGGCCCACTATTTTTGAAGTAGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR GCA 72 bp AGGGTCTGGACCAGGTTCCAGGTTGGTCCAGTCAGATaGCAGAACAAAGAAGAACAGTCAACTAAACTGGTC +
Preference number: 3 (lower is better)
Translates to: RVWTRFQVGPVR*QNKEEQSTKLV
Trigger: GACCAGTTTAGTTGACTGTTCTTCTTTGTTCTGGCATCTGACTGGACCAACCTGGAACCTGGTCCAGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR TCA 72 bp CAGAATGGCAAACCAGTGTCTGGCCGTAGTCCCCATTaGTTCCTGTTATTTTCATCTGAGGAGCCTGTGAAG +
Preference number: 3 (lower is better)
Translates to: QNGKPVSGRSPH*FLLFSSEEPVK
Trigger: CTTCACAGGCTCCTCAGATGAAAATAACAGGAATCAATGGGGACTACGGCCAGACACTGGTTTGCCATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR-3UTR CAA 90 bp CCTCAGGATAGAAACAATCTAGCGACCTTAGAAGTTGAAATGAGGACCATAGGCAAACAAAACTGGCATTaGCCACAGAAGTTTGTGCTC +
Preference number: 3 (lower is better)
Translates to: PQDRNNLATLEVEMRTIGKQNWH*PQKFVL
Trigger: GAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTTT...GCCTATGGTCCTCATTTCAACTTCTAAGGTCGCTAGATTGTTTCTATCCTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR TCA 72 bp CTCATGTACTTGCATGTTTGGGACTCAAATTTTACTTaGTGTCTGTCCATTCTTGTGGCCCTATCAGCCTTC +
Preference number: 3 (lower is better)
Translates to: LMYLHVWDSNFT*CLSILVALSAF
Trigger: GAAGGCTGATAGGGCCACAAGAATGGACAGACATCAAGTAAAATTTGAGTCCCAAACATGCAAGTACATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR GCA 72 bp AAGCTGTTACTCTGGGGAAGATGTAAACCTGCAAAGTaGTTCAGCCTACCTGCCATAGATAAAAATGAGTCA +
Preference number: 3 (lower is better)
Translates to: KLLLWGRCKPAK*FSLPAIDKNES
Trigger: TGACTCATTTTTATCTATGGCAGGTAGGCTGAAGCACTTTGCAGGTTTACATCTTCCCCAGAGTAACAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR TCA 72 bp ACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATaGGACCCTACAATCAGGGTAGGGTACTGCTTTACA +
Preference number: 3 (lower is better)
Translates to: TSIGVGLISVRK*DPTIRVGYCFT
Trigger: TGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
3UTR CCA 72 bp GTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTaGTGTAGGACTAATATCGGTGAGAAAATGAGACCC +
Preference number: 3 (lower is better)
Translates to: VLIGTSAKFHFN*CRTNIGEKMRP
Trigger: GGGTCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
3UTR CCA 72 bp TTCTTGCTGATACTTGTAACAACCTGTTCAAAGTTGTaGAAATCACCTTCTGTTGGCTTTCTGACATGGACT +
Preference number: 3 (lower is better)
Translates to: FLLILVTTCSKL*KSPSVGFLTWT
Trigger: AGTCCATGTCAGAAAGCCAACAGAAGGTGATTTCCACAACTTTGAACAGGTTGTTACAAGTATCAGCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR-3UTR CAA 90 bp TGCAGGCAGTTTGCACAATACCTAATTAACCTTCCTATTGAAAATACCAAATGTCTGACATGGACTTCCTaGCAGCACTGTTACTTCTTA +
Preference number: 3 (lower is better)
Translates to: CRQFAQYLINLPIENTKCLTWTS*QHCYFL
Trigger: TAAGAAGTAACAGTGCTGCAAGGAAGTCCATGTCAG...ACATTTGGTATTTTCAATAGGAAGGTTAATTAGGTATTGTGCAAACTGCCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR TCA 72 bp GTGTTTAACCACAATCATTCACCTTATGGCATGCTTTaGTTACTAGACTTCAGGCAGTCTCATTCATTGTAT +
Preference number: 3 (lower is better)
Translates to: VFNHNHSPYGML*LLDFRQSHSLY
Trigger: ATACAATGAATGAGACTGCCTGAAGTCTAGTAATCAAAGCATGCCATAAGGTGAATGATTGTGGTTAAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR CCA 72 bp CCTAATAGTACTGAAGGTTGGAAAGTTGCATGTGGCTaGATGCTGTTAATTTCTTTAATAGCCATGACTATA +
Preference number: 3 (lower is better)
Translates to: PNSTEGWKVACG*MLLISLIAMTI
Trigger: TATAGTCATGGCTATTAAAGAAATTAACAGCATCCAGCCACATGCAACTTTCCAACCTTCAGTACTATTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR GCA 72 bp TTTCATTCTTTGAATTATAAATGGCCTCAGCAGTTTTaGTCAACTACTGATAAATGCTTTGCCTCCTACCAT +
Preference number: 3 (lower is better)
Translates to: FHSLNYKWPQQF*STTDKCFASYH
Trigger: ATGGTAGGAGGCAAAGCATTTATCAGTAGTTGAGCAAAACTGCTGAGGCCATTTATAATTCAAAGAATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp AATGAGATTCCTACACTTTGCCTAATTGAGCCACTACCAGGTTTTCTGGCAGCTAGGCCTCGCTCTCGTTaGCCTGGACCTCGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: NEIPTLCLIEPLPGFLAARPRSR*PGPRGA
Trigger: AGCACCGCGAGGTCCAGGGCAACGAGAGCGAGGCCT...AGCTGCCAGAAAACCTGGTAGTGGCTCAATTAGGCAAAGTGTAGGAATCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp AAACAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATGGACCTCGCGGTGCTaGACAGCCCGGCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KQNWHLPQKFVLIGTSAKWTSRC*TARPFR
Trigger: CCTGAAGGGCCGGGCTGTGCAGCACCGCGAGGTCCA...TTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp AATGAGATTCCTACACTTTGCCTAATTGAGCCACTACCAGGTTTTCTGGCAGCTCCTGGAACAGCCGTGTaGAGGGCCCGGTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: NEIPTLCLIEPLPGFLAAPGTAV*RARSPS
Trigger: ACTTGGAGACCGGGCCCTCCACACGGCTGTTCCAGG...AGCTGCCAGAAAACCTGGTAGTGGCTCAATTAGGCAAAGTGTAGGAATCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp GGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCACAGCAGTCAGGGATCTCTGTaGCCAGGAAGCGCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GEKMRPYNQGRVLLYNHSSQGSL*PGSAQS
Trigger: AGACTGGGCGCTTCCTGGCCACAGAGATCCCTGACT...GCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp AAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACCACGCCTACATAGGTaGGCCCTCCCCGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: KLAFATEVCAHRHICKISPRLHR*ALPAPG
Trigger: ACCAGGAGCGGGGAGGGCGCACCTATGTAGGCGTGG...TGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp CAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGCCGCCTTCAGCTCCCTaGGCTTGCCCAGCACGTGGT +
Preference number: 4 (lower is better)
Translates to: QKFVLIGTSAKFHFNWCRPPSAP*ACPARG
Trigger: ACCACGTGCTGGGCAAGCGCAGGGAGCTGAAGGCGG...CCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACGAGTGCAGCCTTGAGTaGCGGCTCCACCACCGTGTC +
Preference number: 4 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNECSLE*RLHHRV
Trigger: GACACGGTGGTGGAGCCGGCACTCAAGGCTGCACTC...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp GGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCACAGCGCTCTAGGTTCTCAATaGGCCACACCTGCACTTCCC +
Preference number: 4 (lower is better)
Translates to: GEKMRPYNQGRVLLYNHSALGSQ*ATPALP
Trigger: GGGAAGTGCAGGTGTGGCGCATTGAGAACCTAGAGC...GCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp TTTGTGAAACCTCTTAAGAGGGTAGTCTTGTGGACCATTCAACTCTCCTTCAGCGGGGGCTCGTGTCCCTaGTTCACCACAATGATGGGG +
Preference number: 4 (lower is better)
Translates to: FVKPLKRVVLWTIQLSFSGGSCP*FTTMMG
Trigger: CCCCATCATTGTGGTGAAGCAGGGACACGAGCCCCC...GCTGAAGGAGAGTTGAATGGTCCACAAGACTACCCTCTTAAGAGGTTTCACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp TTTGTGAAACCTCTTAAGAGGGTAGTCTTGTGGACCATTCAACTCTCCTTCAGCCAGGTCCTGTGTCAGTaGCCGTGTGGCGACTTCCCT +
Preference number: 4 (lower is better)
Translates to: FVKPLKRVVLWTIQLSFSQVLCQ*PCGDFP
Trigger: AGGGAAGTCGCCACACGGCCACTGACACAGGACCTG...GCTGAAGGAGAGTTGAATGGTCCACAAGACTACCCTCTTAAGAGGTTTCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp AGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTGGCCTGAGGTCCGGTTaGACGCTGTCCACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RTNIGEKMRPYNQGRVLLGLRSG*TLSTSG
Trigger: TCCAGAAGTGGACAGCGTCCAACCGGACCTCAGGCC...AAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCACAGCTCTCCGTCCGGGAGATaGTGTCAGCAACCATCTTGG +
Preference number: 4 (lower is better)
Translates to: GEKMRPYNQGRVLLYNHSSPSGR*CQQPSW
Trigger: CCAAGATGGTTGCTGACACCATCTCCCGGACGGAGA...GCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp TTTGTGAAACCTCTTAAGAGGGTAGTCTTGTGGACCATTCAACTCTCCTTCAGCGGGCCATCCAGAAGTTaGCTGGCTCCTGCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: FVKPLKRVVLWTIQLSFSGPSRS*LAPALP
Trigger: TGGAAGGGCAGGAGCCAGCCAACTTCTGGATGGCCC...GCTGAAGGAGAGTTGAATGGTCCACAAGACTACCCTCTTAAGAGGTTTCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp GGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCACAGCAGCGCCCAGTCTTGTTaGAACACTCAAAGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: GEKMRPYNQGRVLLYNHSSAQSC*NTQRAG
Trigger: CCCGGCTCTTTGAGTGTTCCAACAAGACTGGGCGCT...GCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACGTTCCTCCTTCCTGCTaGGGTCCACACCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNVPPSC*GPHPRG
Trigger: TCCCCGAGGGTGTGGACCCCAGCAGGAAGGAGGAAC...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
3UTR CAA 72 bp GTGAAGAGTGAGACCACATGTGGGTGTGCACACCTCTaGTCCCCAGGTTTCCCTCCCTTTGAGCTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: VKSETTCGCAHL*SPGFPPFELFF
Trigger: AAAGAAAAGCTCAAAGGGAGGGAAACCTGGGGACAAGAGGTGTGCACACCCACATGTGGTCTCACTCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp TTTGTGAAACCTCTTAAGAGGGTAGTCTTGTGGACCATTCAACTCTCCTTCAGCCGTTCCTCTTGCCCTTaGCATGCAGCAGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: FVKPLKRVVLWTIQLSFSRSSCP*HAAASG
Trigger: TCCAGAGGCTGCTGCATGTCAAGGGCAAGAGGAACG...GCTGAAGGAGAGTTGAATGGTCCACAAGACTACCCTCTTAAGAGGTTTCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp AAGAGGGTAGTCTTGTGGACCATTCAACTCTCCTTCAGCCCTTTAACTTACCCAGCTCTAGGTTCTCAATaGGCCACACCTGCACTTCCC +
Preference number: 4 (lower is better)
Translates to: KRVVLWTIQLSFSPLTYPALGSQ*ATPALP
Trigger: GGGAAGTGCAGGTGTGGCGCATTGAGAACCTAGAGC...TGGGTAAGTTAAAGGGCTGAAGGAGAGTTGAATGGTCCACAAGACTACCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp CCTCAGGATAGAAACAATCTAGCGACCTTAGAAGTTGAAATGAGGACCATAGGCCCTTCCACCACCACTTaGTTCTCCGTCCGGGAGATG +
Preference number: 4 (lower is better)
Translates to: PQDRNNLATLEVEMRTIGPSTTT*FSVREM
Trigger: CATCTCCCGGACGGAGAAGCAAGTGGTGGTGGAAGG...GCCTATGGTCCTCATTTCAACTTCTAAGGTCGCTAGATTGTTTCTATCCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp TGTAGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGAAGTTGGCTGGCTCCTaGCCTTCCACCACCACTTGC +
Preference number: 4 (lower is better)
Translates to: CRTNIGEKMRPYNQGRVLKLAGS*PSTTTC
Trigger: GCAAGTGGTGGTGGAAGGGCAGGAGCCAGCCAACTT...CAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACGGGGGCTCGTGTCCCTaGTTCACCACAATGATGGGG +
Preference number: 4 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNGGSCP*FTTMMG
Trigger: CCCCATCATTGTGGTGAAGCAGGGACACGAGCCCCC...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp CAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGGGTGTTCCTCCTTCCTaGTGGGGTCCACACCCTCGG +
Preference number: 4 (lower is better)
Translates to: QKFVLIGTSAKFHFNWCRGVPPS*WGPHPR
Trigger: CCGAGGGTGTGGACCCCAGCAGGAAGGAGGAACACC...CCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp CAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTGGTGTTCCTCCTTCCTaGTGGGGTCCACACCCTCGG +
Preference number: 4 (lower is better)
Translates to: QNWHLPQKFVLIGTSAKFGVPPS*WGPHPR
Trigger: CCGAGGGTGTGGACCCCAGCAGGAAGGAGGAACACC...AAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp AGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTGACCACATGTGGGTGTaGACACCTCTTGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RTNIGEKMRPYNQGRVLLDHMWV*TPLVPR
Trigger: CCTGGGGACAAGAGGTGTGCACACCCACATGTGGTC...AAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp AGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTCGCTTGCCCAGCACGTaGTTCATCACCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: RTNIGEKMRPYNQGRVLLRLPST*FITSIS
Trigger: GCTGATGGAGGTGATGAACCACGTGCTGGGCAAGCG...AAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp TGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCTGGCTCCTTGCCCATTaGGACCCGGATCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: WHLPQKFVLIGTSAKFHFWLLAH*DPDLDW
Trigger: CCAGTCCAGATCCGGGTCCCAATGGGCAAGGAGCCA...GAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACGGGCCATCCAGAAGTTaGCTGGCTCCTGCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNGPSRS*LAPALP
Trigger: TGGAAGGGCAGGAGCCAGCCAACTTCTGGATGGCCC...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCACAGCGGTATTCCTGTGCAGTaGTTGCTGCGGCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GEKMRPYNQGRVLLYNHSGIPVQ*LLRPSS
Trigger: AGAAGAAGGCCGCAGCAACCACTGCACAGGAATACC...GCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCACAGCGGCATAAGAATAGAGTaGGTGAGGGTCTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: GEKMRPYNQGRVLLYNHSGIRIE*VRVWTR
Trigger: CCTGGTCCAGACCCTCACCCACTCTATTCTTATGCC...GCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp CCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTGAGTGCAGCCTGTCTTaGGGAGGCAGCTGCCACCTG +
Preference number: 4 (lower is better)
Translates to: PQKFVLIGTSAKFHFNWCECSLS*GGSCHL
Trigger: CAGGTGGCAGCTGCCTCCCCAAGACAGGCTGCACTC...ACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392114.6
CDS-3UTR TCA 90 bp AGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTCACAAGGCCTTGCTTaGAGTAGCCTCGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RTNIGEKMRPYNQGRVLLSQGLA*SSLGRP
Trigger: AGGCCTTCCGAGGCTACTTCAAGCAAGGCCTTGTGA...AAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp TTTGTGAAACCTCTTAAGAGGGTAGTCTTGTGGACCATTCAACTCTCCTTCAGCCAGCCACCTGAGGCTTaGCATGCATGGATGTGGCAT +
Preference number: 4 (lower is better)
Translates to: FVKPLKRVVLWTIQLSFSQPPEA*HAWMWH
Trigger: ATGCCACATCCATGCATGTCAAGCCTCAGGTGGCTG...GCTGAAGGAGAGTTGAATGGTCCACAAGACTACCCTCTTAAGAGGTTTCACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp ACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACTGCTGGGCAGCCACCTaGGGCTTGACATGCATGGAT +
Preference number: 4 (lower is better)
Translates to: TNIGEKMRPYNQGRVLLYCWAAT*GLTCMD
Trigger: ATCCATGCATGTCAAGCCTCAGGTGGCTGCCCAGCA...GTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCCTGCTTCACCACAATaGTGGGGGTCTCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNPASPQ*WGSQGH
Trigger: GTGACCCTGAGACCCCCATCATTGTGGTGAAGCAGG...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp GGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCACAGCCTTCTGTTGGCTTTCTaGCATGGACTTCCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GEKMRPYNQGRVLLYNHSLLLAF*HGLPCS
Trigger: GCTGCAAGGAAGTCCATGTCAGAAAGCCAACAGAAG...GCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp CCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTATGGCAGCTGCCCCCTaGTCATCCAGGGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: PQKFVLIGTSAKFHFNWCMAAAP*SSRDES
Trigger: GGACTCATCCCTGGATGAGCAGGGGGCAGCTGCCAT...ACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACTCAGCTCCCTGCGCTTaGCCAGCACGTGGTTCATCA +
Preference number: 4 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNSAPCA*PARGSS
Trigger: TGATGAACCACGTGCTGGGCAAGCGCAGGGAGCTGA...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp AGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTCTGTGTGGTGTAGATaGCAGCTGCCCCCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: RTNIGEKMRPYNQGRVLLSVWCR*QLPPAH
Trigger: ATGAGCAGGGGGCAGCTGCCATCTACACCACACAGA...AAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp TGCAGGCAGTTTGCACAATACCTAATTAACCTTCCTATTGAAAATACCAAATGTCGCCCTCCCCGCTCCTaGTCTCGGATCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: CRQFAQYLINLPIENTKCRPPRS*SRISLA
Trigger: GGCCAAGGAGATCCGAGACCAGGAGCGGGGAGGGCG...ACATTTGGTATTTTCAATAGGAAGGTTAATTAGGTATTGTGCAAACTGCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp ACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAGGCCTTGGTGTTGTTaGCGCCAGTTCCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: TNIGEKMRPYNQGRVLLYRPWCC*RQFPGP
Trigger: AGGTCCAGGGAACTGGCGCCAACAACACCAAGGCCT...GTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACAGGCCTTGGTGTTGTTaGCGCCAGTTCCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNRPWCC*RQFPGP
Trigger: AGGTCCAGGGAACTGGCGCCAACAACACCAAGGCCT...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp TGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCTGTCAGCAACCATCTTaGCCATCTCCCGCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: WHLPQKFVLIGTSAKFHFCQQPS*PSPARP
Trigger: GGGACGAGCGGGAGATGGCCAAGATGGTTGCTGACA...GAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp TGTAGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGGTAGTCTCTTGGTGTTaGCATAGGGGGCCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: CRTNIGEKMRPYNQGRVLVVSWC*HRGPSH
Trigger: GTGGGAAGGCCCCCTATGCCAACACCAAGAGACTAC...CAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp TTTGTGAAACCTCTTAAGAGGGTAGTCTTGTGGACCATTCAACTCTCCTTCAGCAGCAGAGAAGGCAGCTaGAGTCATCCCAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: FVKPLKRVVLWTIQLSFSSREGS*SHPKGL
Trigger: CAGGCCTTTGGGATGACTCCAGCTGCCTTCTCTGCT...GCTGAAGGAGAGTTGAATGGTCCACAAGACTACCCTCTTAAGAGGTTTCACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp TTTGTGAAACCTCTTAAGAGGGTAGTCTTGTGGACCATTCAACTCTCCTTCAGCGGGCAGTTAGCATGTTaGGGCCAGGAAGGGACAAGT +
Preference number: 4 (lower is better)
Translates to: FVKPLKRVVLWTIQLSFSGQLAC*GQEGTS
Trigger: ACTTGTCCCTTCCTGGCCCCAACATGCTAACTGCCC...GCTGAAGGAGAGTTGAATGGTCCACAAGACTACCCTCTTAAGAGGTTTCACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp GCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGACCCCCAGAGTCATGCCCCTaGGTCTCTCCATACGGGTGC +
Preference number: 4 (lower is better)
Translates to: AKFHFNWCRTNIGEKMRPPESCP*VSPYGC
Trigger: GCACCCGTATGGAGAGACTCAGGGGCATGACTCTGG...GGGTCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp ACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACAGTCCTCGTGACTaGGCAGGTCCTGTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: TNIGEKMRPYNQGRVLLYNSPRD*AGPVSV
Trigger: CACTGACACAGGACCTGCTCAGTCACGAGGACTGTT...GTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACAACAGTCCTCGTGACTaGGCAGGTCCTGTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNNSPRD*AGPVSV
Trigger: CACTGACACAGGACCTGCTCAGTCACGAGGACTGTT...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp CCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTTGCTGGGCAGCCACCTaGGGCTTGACATGCATGGAT +
Preference number: 4 (lower is better)
Translates to: PQKFVLIGTSAKFHFNWCCWAAT*GLTCMD
Trigger: ATCCATGCATGTCAAGCCTCAGGTGGCTGCCCAGCA...ACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp CAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTGCTGCTTCTCGCCGATaGGGTAGGTGTAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QNWHLPQKFVLIGTSAKFAASRR*GRCRAA
Trigger: TGCTGCTCTACACCTACCTCATCGGCGAGAAGCAGC...AAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp GGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCACAGCAAGATGGACATAAGATaGGGTGGCTCCTTGCCCATT +
Preference number: 4 (lower is better)
Translates to: GEKMRPYNQGRVLLYNHSKMDIR*GGSLPI
Trigger: AATGGGCAAGGAGCCACCTCATCTTATGTCCATCTT...GCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp AAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACCTGCTTCACCACAATaGTGGGGGTCTCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: KLAFATEVCAHRHICKISPASPQ*WGSQGH
Trigger: GTGACCCTGAGACCCCCATCATTGTGGTGAAGCAGG...TGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp AAACAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAAGGCCTGTGTGAAGAGTaGGACCACATGTGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: KQNWHLPQKFVLIGTSAKGLCEE*DHMWVC
Trigger: GCACACCCACATGTGGTCTCACTCTTCACACAGGCC...TTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp CAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGTCGATCCTCCATATCTaGAGCCCCGGGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: QKFVLIGTSAKFHFNWCRSILHI*SPGVVM
Trigger: CATCACCACCCCGGGGCTGCAGATATGGAGGATCGA...CCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp GCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGACCCGGTGTAGATGGCAGCTaGCCCCTGCTCATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: AKFHFNWCRTNIGEKMRPGVDGS*PLLIQG
Trigger: TCCCTGGATGAGCAGGGGGCAGCTGCCATCTACACC...GGGTCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp AAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCAGCACCTCCACCTGTGTaGTTGGTGGGTACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: KLAFATEVCAHRHICKISAPPPV*LVGTAW
Trigger: CCAAGCAGTACCCACCAAGCACACAGGTGGAGGTGC...TGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp CAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTGCACCTCCACCTGTGTaGTTGGTGGGTACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: QNWHLPQKFVLIGTSAKFAPPPV*LVGTAW
Trigger: CCAAGCAGTACCCACCAAGCACACAGGTGGAGGTGC...AAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp CAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCCACAGTGTGGGTTTTaGCTAGGCCTGAGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: QNWHLPQKFVLIGTSAKFPQCGF*LGLRSG
Trigger: ACCGGACCTCAGGCCTAGGCAAAACCCACACTGTGG...AAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp CATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATCTTGGCTGGCCTGGCTaGCCTGCCAAACGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: HLPQKFVLIGTSAKFHFNLGWPG*PAKRRA
Trigger: TGCTCTACGTTTGGCAGGGCAGCCAGGCCAGCCAAG...ATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp GTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCCTTGGCTGGCCTGGCTaGCCTGCCAAACGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: VLIGTSAKFHFNWCRTNILGWPG*PAKRRA
Trigger: TGCTCTACGTTTGGCAGGGCAGCCAGGCCAGCCAAG...GATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp CAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTAAGTTGGCTGGCTCCTaGCCTTCCACCACCACTTGC +
Preference number: 4 (lower is better)
Translates to: QNWHLPQKFVLIGTSAKFKLAGS*PSTTTC
Trigger: GCAAGTGGTGGTGGAAGGGCAGGAGCCAGCCAACTT...AAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGTGTCAGTGGCCGTGTaGCGACTTCCCTCACCACCA +
Preference number: 4 (lower is better)
Translates to: VLIGTSAKFHFNWCRTNIVSVAV*RLPSPP
Trigger: TGGTGGTGAGGGAAGTCGCCACACGGCCACTGACAC...GATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGACCCCAGGTCCTGTGTCAGTaGCCGTGTGGCGACTTCCCT +
Preference number: 4 (lower is better)
Translates to: AKFHFNWCRTNIGEKMRPQVLCQ*PCGDFP
Trigger: AGGGAAGTCGCCACACGGCCACTGACACAGGACCTG...GGGTCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp TGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCTCAGCGCATGGCTCATaGCTCCCTTCTTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: WHLPQKFVLIGTSAKFHFSAHGS*LPSSPA
Trigger: AGCAGGAGAAGAAGGGAGCCATGAGCCATGCGCTGA...GAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp CAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACGGAGCCCACAGTGTaGGTTTTGCCTAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QKFVLIGTSAKFHFNWCRTEPTV*VLPRPE
Trigger: CTCAGGCCTAGGCAAAACCCACACTGTGGGCTCCGT...CCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp TGTAGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGAGTGGCCTAGCCACTTaGAATCCACAGGTACCAGCT +
Preference number: 4 (lower is better)
Translates to: CRTNIGEKMRPYNQGRVLSGLAT*NPQVPA
Trigger: AGCTGGTACCTGTGGATTCCAAGTGGCTAGGCCACT...CAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCTGGCTCCTTGCCCATTaGGACCCGGATCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: VLIGTSAKFHFNWCRTNIWLLAH*DPDLDW
Trigger: CCAGTCCAGATCCGGGTCCCAATGGGCAAGGAGCCA...GATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp TGTAGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGGGACATAAGATGAGGTaGCTCCTTGCCCATTGGGAC +
Preference number: 4 (lower is better)
Translates to: CRTNIGEKMRPYNQGRVLGHKMR*LLAHWD
Trigger: GTCCCAATGGGCAAGGAGCCACCTCATCTTATGTCC...CAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCTTGGCGCCAGTTCCCTaGACCTGGAACAGCCGTGTG +
Preference number: 4 (lower is better)
Translates to: VLIGTSAKFHFNWCRTNILAPVP*TWNSRV
Trigger: CACACGGCTGTTCCAGGTCCAGGGAACTGGCGCCAA...GATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACGGACCTCAAAGGCCTTaGTGTTGTTGGCGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNGPQRP*CCWRQF
Trigger: GAACTGGCGCCAACAACACCAAGGCCTTTGAGGTCC...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp AAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCATGTCAGCAACCATCTTaGCCATCTCCCGCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: KLAFATEVCAHRHICKISCQQPS*PSPARP
Trigger: GGGACGAGCGGGAGATGGCCAAGATGGTTGCTGACA...TGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp ACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACTCTCCGTCCGGGAGATaGTGTCAGCAACCATCTTGG +
Preference number: 4 (lower is better)
Translates to: TNIGEKMRPYNQGRVLLYSPSGR*CQQPSW
Trigger: CCAAGATGGTTGCTGACACCATCTCCCGGACGGAGA...GTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp CAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCATCCAGAAGTTGGCTaGCTCCTGCCCTTCCACCAC +
Preference number: 4 (lower is better)
Translates to: QNWHLPQKFVLIGTSAKFHPEVG*LLPFHH
Trigger: GTGGTGGAAGGGCAGGAGCCAGCCAACTTCTGGATG...AAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAAGTTCCTCCTTCCTGCTaGGGTCCACACCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: AHLQNFTSIGVGLISVRKVPPSC*GPHPRG
Trigger: TCCCCGAGGGTGTGGACCCCAGCAGGAAGGAGGAAC...TTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp CCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTTCAGCTTGGTCATGGTaGGTGAGCCTGTCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PQKFVLIGTSAKFHFNWCSAWSW*VSLSWG
Trigger: TCCCCAAGACAGGCTCACTCACCATGACCAAGCTGA...ACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp GCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGACCCGCTGCTTCTCGCCGATaGGGTAGGTGTAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AKFHFNWCRTNIGEKMRPAASRR*GRCRAA
Trigger: TGCTGCTCTACACCTACCTCATCGGCGAGAAGCAGC...GGGTCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp AATGAGATTCCTACACTTTGCCTAATTGAGCCACTACCAGGTTTTCTGGCAGCTAGACATCATTGGAATTaGGGAAATTGGCCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: NEIPTLCLIEPLPGFLAARHHWN*GNWPAL
Trigger: CAGCGCGGGCCAATTTCCTCAATTCCAATGATGTCT...AGCTGCCAGAAAACCTGGTAGTGGCTCAATTAGGCAAAGTGTAGGAATCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp CCTCAGGATAGAAACAATCTAGCGACCTTAGAAGTTGAAATGAGGACCATAGGCAATAGTGGGCCTGTGTaGAGAGTGAGACCACATGTG +
Preference number: 4 (lower is better)
Translates to: PQDRNNLATLEVEMRTIGNSGPV*RVRPHV
Trigger: CACATGTGGTCTCACTCTTCACACAGGCCCACTATT...GCCTATGGTCCTCATTTCAACTTCTAAGGTCGCTAGATTGTTTCTATCCTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp GCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAACTCTTGCCCTTGACATaGAGCAGCCTCTGGACGTCA +
Preference number: 4 (lower is better)
Translates to: AFATEVCAHRHICKISLQLLPLT*SSLWTS
Trigger: TGACGTCCAGAGGCTGCTGCATGTCAAGGGCAAGAG...TTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACATGGTACAGTTTGAGTaGAGCCTTGAGTGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNMVQFE*SLECRL
Trigger: GAGCCGGCACTCAAGGCTGCACTCAAACTGTACCAT...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACTCAGCCCCATCATTCTaGACCTCCACCTGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNSAPSF*TSTCVL
Trigger: AAGCACACAGGTGGAGGTGCAGAATGATGGGGCTGA...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp TGCTTCCGTTGCAGGCAGTTTGCACAATACCTAATTAACCTTCCTATTGAAAATCCACAGTGTGGGTTTTaGCTAGGCCTGAGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: CFRCRQFAQYLINLPIENPQCGF*LGLRSG
Trigger: ACCGGACCTCAGGCCTAGGCAAAACCCACACTGTGG...ATTTTCAATAGGAAGGTTAATTAGGTATTGTGCAAACTGCCTGCAACGGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp GGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAGATGAGGTGGCTCCTTaGCCATTGGGACCCGGATCT +
Preference number: 4 (lower is better)
Translates to: GTSAKFHFNWCRTNIGEKDEVAP*PLGPGS
Trigger: AGATCCGGGTCCCAATGGGCAAGGAGCCACCTCATC...TTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp ACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACCTTGAGGTATTCCTGTaGAGTGGTTGCTGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: TNIGEKMRPYNQGRVLLYLEVFL*SGCCGL
Trigger: AAGGCCGCAGCAACCACTGCACAGGAATACCTCAAG...GTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCTTGAGGTATTCCTGTaGAGTGGTTGCTGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNLEVFL*SGCCGL
Trigger: AAGGCCGCAGCAACCACTGCACAGGAATACCTCAAG...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp GGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAGGCTTGTTCACTAGCTaGTCCAGGGGGAAGATGGGC +
Preference number: 4 (lower is better)
Translates to: GTSAKFHFNWCRTNIGEKGLFTS*SRGKMG
Trigger: GCCCATCTTCCCCCTGGAGCAGCTAGTGAACAAGCC...TTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp GGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCACAGCTGTAAACCTGCAAAGTaGTTCAGCCTACCTGCCATA +
Preference number: 4 (lower is better)
Translates to: GEKMRPYNQGRVLLYNHSCKPAK*FSLPAI
Trigger: TATGGCAGGTAGGCTGAAGCACTTTGCAGGTTTACA...GCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp TGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCCAGGCACCATCTGCATaGCCTCGATCCTCCATATCT +
Preference number: 4 (lower is better)
Translates to: WHLPQKFVLIGTSAKFHFQAPSA*PRSSIS
Trigger: AGATATGGAGGATCGAGGCCATGCAGATGGTGCCTG...GAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp GGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAACGGAGCCCACAGTGTaGGTTTTGCCTAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GTSAKFHFNWCRTNIGEKTEPTV*VLPRPE
Trigger: CTCAGGCCTAGGCAAAACCCACACTGTGGGCTCCGT...TTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp TGTAGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGATTGGGACCCGGATCTaGACTGGTTCACCATTGTAC +
Preference number: 4 (lower is better)
Translates to: CRTNIGEKMRPYNQGRVLIGTRI*TGSPLY
Trigger: GTACAATGGTGAACCAGTCCAGATCCGGGTCCCAAT...CAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp ACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGCCTGGAACAGCCGTGTaGAGGGCCCGGTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: TSAKFHFNWCRTNIGEKMPGTAV*RARSPS
Trigger: ACTTGGAGACCGGGCCCTCCACACGGCTGTTCCAGG...CATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATTGGCGCCAGTTCCCTaGACCTGGAACAGCCGTGTG +
Preference number: 4 (lower is better)
Translates to: AHLQNFTSIGVGLISVRKLAPVP*TWNSRV
Trigger: CACACGGCTGTTCCAGGTCCAGGGAACTGGCGCCAA...TTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAGAAATTGGCCCGCGCTaGGACCTCAAAGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: GTSAKFHFNWCRTNIGEKEIGPR*DLKGLG
Trigger: ACCAAGGCCTTTGAGGTCCCAGCGCGGGCCAATTTC...TTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp CATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATGAAATTGGCCCGCGCTaGGACCTCAAAGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: HLPQKFVLIGTSAKFHFNEIGPR*DLKGLG
Trigger: ACCAAGGCCTTTGAGGTCCCAGCGCGGGCCAATTTC...ATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAAGTCAGGGATCTCTGTaGCCAGGAAGCGCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GTSAKFHFNWCRTNIGEKSQGSL*PGSAQS
Trigger: AGACTGGGCGCTTCCTGGCCACAGAGATCCCTGACT...TTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp AAACAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATCACGCCCGCTGGGATaGGTCTTGAGGTATTCCTGT +
Preference number: 4 (lower is better)
Translates to: KQNWHLPQKFVLIGTSAKSRPLG*VLRYSC
Trigger: ACAGGAATACCTCAAGACCCATCCCAGCGGGCGTGA...TTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAAAGCAGAGAAGGCAGCTaGAGTCATCCCAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: AFATEVCAHRHICKISLQSREGS*SHPKGL
Trigger: CAGGCCTTTGGGATGACTCCAGCTGCCTTCTCTGCT...TTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp CTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTCTGCTCATCCAGGGATaGGTCCTGGCCAATCCAGTA +
Preference number: 4 (lower is better)
Translates to: LIGTSAKFHFNWCRTNIGLLIQG*VLANPV
Trigger: TACTGGATTGGCCAGGACTCATCCCTGGATGAGCAG...ACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp CTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTCAGCCACCTGAGGCTTaGCATGCATGGATGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LIGTSAKFHFNWCRTNIGQPPEA*HAWMWH
Trigger: ATGCCACATCCATGCATGTCAAGCCTCAGGTGGCTG...ACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACACTTCTGGTCCAGGATaGCGGCTTGATAAGCTGATG +
Preference number: 4 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNTSGPG*RLDKLM
Trigger: CATCAGCTTATCAAGCCGTCATCCTGGACCAGAAGT...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp GCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAACGCTGGGATGGGTCTTaGGGTATTCCTGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: AHLQNFTSIGVGLISVRKRWDGS*GIPVQW
Trigger: CCACTGCACAGGAATACCTCAAGACCCATCCCAGCG...TTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp CCTCAGGATAGAAACAATCTAGCGACCTTAGAAGTTGAAATGAGGACCATAGGCTCCCAAAGGCCTGAGTaGAATCTTCAATGGACAGGT +
Preference number: 4 (lower is better)
Translates to: PQDRNNLATLEVEMRTIGSQRPE*NLQWTG
Trigger: ACCTGTCCATTGAAGATTTCACTCAGGCCTTTGGGA...GCCTATGGTCCTCATTTCAACTTCTAAGGTCGCTAGATTGTTTCTATCCTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp AAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACATCTGAGGAGCCTGTaGAGCTTTGCAGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: KLAFATEVCAHRHICKISHLRSL*SFAEAS
Trigger: AGAAGCCTCTGCAAAGCTTCACAGGCTCCTCAGATG...TGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp AGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTGTGTGTGCACACTCATaGGTTTTGTCTCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: RTNIGEKMRPYNQGRVLLVCAHS*VLSQQD
Trigger: ATCCTGCTGAGACAAAACTCATGAGTGTGCACACAC...AAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp AGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTAAGTTAGATAAGGACTaGGTGCTTCCGTTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RTNIGEKMRPYNQGRVLLKLDKD*VLPLQA
Trigger: TGCCTGCAACGGAAGCACTCAGTCCTTATCTAACTT...AAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp GCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGACCCGGAACAGGCACCATCTaGATGGCCTCGATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: AKFHFNWCRTNIGEKMRPGTGTI*MASILH
Trigger: ATGGAGGATCGAGGCCATGCAGATGGTGCCTGTTCC...GGGTCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp ATCTACTTCTTTGACTACCAGTGGAGATTTCAGCTGGACTATGTTGATGGGGTTAGAAGCTTCCAAAGGTaGTGGAAGGAACAGGCACCA +
Preference number: 4 (lower is better)
Translates to: IYFFDYQWRFQLDYVDGVRSFQR*WKEQAP
Trigger: TGGTGCCTGTTCCTTCCAGCACCTTTGGAAGCTTCT...AACCCCATCAACATAGTCCAGCTGAAATCTCCACTGGTAGTCAAAGAAGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp AAACAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAAGTCTCTCCATACGGGTaGTTTCCGGTCCATTCCACT +
Preference number: 4 (lower is better)
Translates to: KQNWHLPQKFVLIGTSAKVSPYG*FPVHST
Trigger: AGTGGAATGGACCGGAAAGCACCCGTATGGAGAGAC...TTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp AAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCATCAGCCCCATCATTCTaGACCTCCACCTGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: KLAFATEVCAHRHICKISSAPSF*TSTCVL
Trigger: AAGCACACAGGTGGAGGTGCAGAATGATGGGGCTGA...TGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp GCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAACCTTCCACCACCACTTaGTTCTCCGTCCGGGAGATG +
Preference number: 4 (lower is better)
Translates to: AHLQNFTSIGVGLISVRKPSTTT*FSVREM
Trigger: CATCTCCCGGACGGAGAAGCAAGTGGTGGTGGAAGG...TTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp AATGAGATTCCTACACTTTGCCTAATTGAGCCACTACCAGGTTTTCTGGCAGCTACTGAGTGCTTCCGTTaGAGGCAGTTTGCACAATAC +
Preference number: 4 (lower is better)
Translates to: NEIPTLCLIEPLPGFLAATECFR*RQFAQY
Trigger: GTATTGTGCAAACTGCCTGCAACGGAAGCACTCAGT...AGCTGCCAGAAAACCTGGTAGTGGCTCAATTAGGCAAAGTGTAGGAATCTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp CAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGATGGTACAGTTTGAGTaGAGCCTGTCTTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: QKFVLIGTSAKFHFNWCRMVQFE*SLSWGG
Trigger: GCCTCCCCAAGACAGGCTGCACTCAAACTGTACCAT...CCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392114.6
CDS-3UTR CCA 90 bp CATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATGAGGCAGCTGCCACCTaGGAGATCTCAGGGAATTGT +
Preference number: 4 (lower is better)
Translates to: HLPQKFVLIGTSAKFHFNEAAAT*EISGNC
Trigger: ACAATTCCCTGAGATCTCCCAGGTGGCAGCTGCCTC...ATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp AAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCAAGAGAGCCTTTGACTTaGGCGCTCAGCTTGGTCATG +
Preference number: 4 (lower is better)
Translates to: KLAFATEVCAHRHICKISREPLT*ALSLVM
Trigger: CATGACCAAGCTGAGCGCCCAAGTCAAAGGCTCTCT...TGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACTCGGAGTCAGACACATaGTACAGTTTGAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNSESDT*YSLSAA
Trigger: GGCTGCACTCAAACTGTACCATGTGTCTGACTCCGA...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp TGCAGGCAGTTTGCACAATACCTAATTAACCTTCCTATTGAAAATACCAAATGTGTGTCAGTGGCCGTGTaGCGACTTCCCTCACCACCA +
Preference number: 4 (lower is better)
Translates to: CRQFAQYLINLPIENTKCVSVAV*RLPSPP
Trigger: TGGTGGTGAGGGAAGTCGCCACACGGCCACTGACAC...ACATTTGGTATTTTCAATAGGAAGGTTAATTAGGTATTGTGCAAACTGCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp GCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGACCCTCAGCGCATGGCTCATaGCTCCCTTCTTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: AKFHFNWCRTNIGEKMRPSAHGS*LPSSPA
Trigger: AGCAGGAGAAGAAGGGAGCCATGAGCCATGCGCTGA...GGGTCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp AAACAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAACTCCACCTGTGTGCTTaGTGGGTACTGCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: KQNWHLPQKFVLIGTSAKLHLCA*WVLLGF
Trigger: AAAGCCAAGCAGTACCCACCAAGCACACAGGTGGAG...TTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp ACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGGGCCTGAGGTCCGGTTaGACGCTGTCCACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TSAKFHFNWCRTNIGEKMGLRSG*TLSTSG
Trigger: TCCAGAAGTGGACAGCGTCCAACCGGACCTCAGGCC...CATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp AAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCAAGTGGCCTAGCCACTTaGAATCCACAGGTACCAGCT +
Preference number: 4 (lower is better)
Translates to: KLAFATEVCAHRHICKISSGLAT*NPQVPA
Trigger: AGCTGGTACCTGTGGATTCCAAGTGGCTAGGCCACT...TGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAACATCCAGAAGTTGGCTaGCTCCTGCCCTTCCACCAC +
Preference number: 4 (lower is better)
Translates to: AHLQNFTSIGVGLISVRKHPEVG*LLPFHH
Trigger: GTGGTGGAAGGGCAGGAGCCAGCCAACTTCTGGATG...TTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp CATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATAGCGCCCAGTCTTGTTaGAACACTCAAAGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: HLPQKFVLIGTSAKFHFNSAQSC*NTQRAG
Trigger: CCCGGCTCTTTGAGTGTTCCAACAAGACTGGGCGCT...ATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp CTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTTCACGCCCGCTGGGATaGGTCTTGAGGTATTCCTGT +
Preference number: 4 (lower is better)
Translates to: LIGTSAKFHFNWCRTNIGSRPLG*VLRYSC
Trigger: ACAGGAATACCTCAAGACCCATCCCAGCGGGCGTGA...ACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAAACCTCAGCAGTGATCTaGCTCCAGTCCCTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: AFATEVCAHRHICKISLQTSAVI*LQSLEL
Trigger: CAACTCTAGGGACTGGAGCCAGATCACTGCTGAGGT...TTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp TGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAAACATCCCCTCGGTTaGAACTCTTCCAGGACATCT +
Preference number: 4 (lower is better)
Translates to: WHLPQKFVLIGTSAKFHFKHPLG*NSSRTS
Trigger: AGATGTCCTGGAAGAGTTTCAACCGAGGGGATGTTT...GAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp GCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAACCAAGTCATCCTGATTaGAGTCAGGGATCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: AFATEVCAHRHICKISLQPSHPD*SQGSLW
Trigger: CCACAGAGATCCCTGACTTCAATCAGGATGACTTGG...TTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp AATGAGATTCCTACACTTTGCCTAATTGAGCCACTACCAGGTTTTCTGGCAGCTTCTTCCAAGTCATCCTaGTTGAAGTCAGGGATCTCT +
Preference number: 4 (lower is better)
Translates to: NEIPTLCLIEPLPGFLAASSKSS*LKSGIS
Trigger: AGAGATCCCTGACTTCAATCAGGATGACTTGGAAGA...AGCTGCCAGAAAACCTGGTAGTGGCTCAATTAGGCAAAGTGTAGGAATCTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp TCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGACGCTGGGATGGGTCTTaGGGTATTCCTGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SAKFHFNWCRTNIGEKMRRWDGS*GIPVQW
Trigger: CCACTGCACAGGAATACCTCAAGACCCATCCCAGCG...TCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp CTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTTGGTGTTACTCCACTTaGAGGGATCCCAAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LIGTSAKFHFNWCRTNIGWCYST*RDPKPG
Trigger: TCCTGGCTTGGGATCCCTTCAAGTGGAGTAACACCA...ACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp AAGAGGGTAGTCTTGTGGACCATTCAACTCTCCTTCAGCCCTTTAACTTACCCATCAGCTGGACTATGTTaGTGGGGTTTGTTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: KRVVLWTIQLSFSPLTYPSAGLC*WGLLLF
Trigger: AAACAACAACAAACCCCATCAACATAGTCCAGCTGA...TGGGTAAGTTAAAGGGCTGAAGGAGAGTTGAATGGTCCACAAGACTACCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp CTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTACACATGGTACAGTTTaGGTGCAGCCTGTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LIGTSAKFHFNWCRTNIGTHGTV*VQPVLG
Trigger: CCCCAAGACAGGCTGCACTCAAACTGTACCATGTGT...ACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392114.6
CDS-3UTR GCA 90 bp GCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATTCCTGTGCAGTGGTTaGTGCGGCCTTCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: AHLQNFTSIGVGLISVRKFLCSG*CGLLLL
Trigger: GAGGAGAAGAAGGCCGCAGCAACCACTGCACAGGAA...TTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp ACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGGGCTTGTTCACTAGCTaGTCCAGGGGGAAGATGGGC +
Preference number: 4 (lower is better)
Translates to: TSAKFHFNWCRTNIGEKMGLFTS*SRGKMG
Trigger: GCCCATCTTCCCCCTGGAGCAGCTAGTGAACAAGCC...CATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp TGTAGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGTTCTTGAGGTTTTGTTaGTTCCATCGAGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: CRTNIGEKMRPYNQGRVLFLRFC*FHRGRA
Trigger: TGCTCTGCCTCGATGGAAGCAACAAAACCTCAAGAA...CAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp AAACAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAAGAGCCTGTGAAGCTTTaGAGAGGCTTCTGGGTAAGT +
Preference number: 4 (lower is better)
Translates to: KQNWHLPQKFVLIGTSAKEPVKL*RGFWVS
Trigger: ACTTACCCAGAAGCCTCTGCAAAGCTTCACAGGCTC...TTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp CCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTTCGGAGTCAGACACATaGTACAGTTTGAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PQKFVLIGTSAKFHFNWCSESDT*YSLSAA
Trigger: GGCTGCACTCAAACTGTACCATGTGTCTGACTCCGA...ACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp AAACAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAAATGAAGTTCAGCGCATaGCTCATGGCTCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KQNWHLPQKFVLIGTSAKMKFSA*LMAPFF
Trigger: GAAGAAGGGAGCCATGAGCCATGCGCTGAACTTCAT...TTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAACACCTGTGTGCTTGGTaGGTACTGCTTGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: AFATEVCAHRHICKISLQHLCAW*VLLGFD
Trigger: ATCAAAGCCAAGCAGTACCCACCAAGCACACAGGTG...TTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAAGACCCGGATCTGGACTaGTTCACCATTGTACTTCTG +
Preference number: 4 (lower is better)
Translates to: AFATEVCAHRHICKISLQDPDLD*FTIVLL
Trigger: CAGAAGTACAATGGTGAACCAGTCCAGATCCGGGTC...TTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp CCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTATTGGGACCCGGATCTaGACTGGTTCACCATTGTAC +
Preference number: 4 (lower is better)
Translates to: PQKFVLIGTSAKFHFNWCIGTRI*TGSPLY
Trigger: GTACAATGGTGAACCAGTCCAGATCCGGGTCCCAAT...ACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp CATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATGGACATAAGATGAGGTaGCTCCTTGCCCATTGGGAC +
Preference number: 4 (lower is better)
Translates to: HLPQKFVLIGTSAKFHFNGHKMR*LLAHWD
Trigger: GTCCCAATGGGCAAGGAGCCACCTCATCTTATGTCC...ATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAAGTAGTCTCTTGGTGTTaGCATAGGGGGCCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: AHLQNFTSIGVGLISVRKVVSWC*HRGPSH
Trigger: GTGGGAAGGCCCCCTATGCCAACACCAAGAGACTAC...TTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCCTTCCTGTAGTCTCTTaGTGTTGGCATAGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: VLIGTSAKFHFNWCRTNILPVVS*CWHRGP
Trigger: AGGCCCCCTATGCCAACACCAAGAGACTACAGGAAG...GATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp ATCTACTTCTTTGACTACCAGTGGAGATTTCAGCTGGACTATGTTGATGGGGTTATCCAGAAGAAGACCTaGTCCCAGACATCTAGTAGG +
Preference number: 4 (lower is better)
Translates to: IYFFDYQWRFQLDYVDGVIQKKT*SQTSSR
Trigger: CCTACTAGATGTCTGGGACCAGGTCTTCTTCTGGAT...AACCCCATCAACATAGTCCAGCTGAAATCTCCACTGGTAGTCAAAGAAGTAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp ACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACTCTTCTCCTCCTCGTTaGCATGTTTCCCAATCCAGA +
Preference number: 4 (lower is better)
Translates to: TNIGEKMRPYNQGRVLLYSSPPR*HVSQSR
Trigger: TCTGGATTGGGAAACATGCCAACGAGGAGGAGAAGA...GTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp AAGAGGGTAGTCTTGTGGACCATTCAACTCTCCTTCAGCCCTTTAACTTACCCAACCATAGGCTCCTTTTaGGGTATCATCTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: KRVVLWTIQLSFSPLTYPTIGSF*GIIFLK
Trigger: CTTCAGAAAGATGATACCCCAAAAGGAGCCTATGGT...TGGGTAAGTTAAAGGGCTGAAGGAGAGTTGAATGGTCCACAAGACTACCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp AAGAGGGTAGTCTTGTGGACCATTCAACTCTCCTTCAGCCCTTTAACTTACCCAGAAAAGCTGTTACTCTaGGGAAGATGTAAACCTGCA +
Preference number: 4 (lower is better)
Translates to: KRVVLWTIQLSFSPLTYPEKLLL*GRCKPA
Trigger: TGCAGGTTTACATCTTCCCCAGAGTAACAGCTTTTC...TGGGTAAGTTAAAGGGCTGAAGGAGAGTTGAATGGTCCACAAGACTACCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR CAA 72 bp TTGCAGAGGCTTCTGGGTAAGTTTGTAAACCTAGCATaGGCCTTCACTAGGCTCTTGCTTTGCCTCATTATT +
Preference number: 4 (lower is better)
Translates to: LQRLLGKFVNLA*AFTRLLLCLII
Trigger: AATAATGAGGCAAAGCAAGAGCCTAGTGAAGGCCAATGCTAGGTTTACAAACTTACCCAGAAGCCTCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp TTTGTGAAACCTCTTAAGAGGGTAGTCTTGTGGACCATTCAACTCTCCTTCAGCGACGGCTTGATAAGCTaGTGCTGTAATTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: FVKPLKRVVLWTIQLSFSDGLIS*CCNFIL
Trigger: CAAGATGAAATTACAGCATCAGCTTATCAAGCCGTC...GCTGAAGGAGAGTTGAATGGTCCACAAGACTACCCTCTTAAGAGGTTTCACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp AGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTGACGGCTTGATAAGCTaGTGCTGTAATTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: RTNIGEKMRPYNQGRVLLDGLIS*CCNFIL
Trigger: CAAGATGAAATTACAGCATCAGCTTATCAAGCCGTC...AAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp CTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTACTTCTGGTCCAGGATaGCGGCTTGATAAGCTGATG +
Preference number: 4 (lower is better)
Translates to: LIGTSAKFHFNWCRTNIGTSGPG*RLDKLM
Trigger: CATCAGCTTATCAAGCCGTCATCCTGGACCAGAAGT...ACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp GCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAAAAGATGGACATAAGATaGGGTGGCTCCTTGCCCATT +
Preference number: 4 (lower is better)
Translates to: AFATEVCAHRHICKISLQKMDIR*GGSLPI
Trigger: AATGGGCAAGGAGCCACCTCATCTTATGTCCATCTT...TTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp GCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGACCCAGACATCATTGGAATTaGGGAAATTGGCCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: AKFHFNWCRTNIGEKMRPRHHWN*GNWPAL
Trigger: CAGCGCGGGCCAATTTCCTCAATTCCAATGATGTCT...GGGTCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp AAACAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATCCCAAAGGCCTGAGTaGAATCTTCAATGGACAGGT +
Preference number: 4 (lower is better)
Translates to: KQNWHLPQKFVLIGTSAKSQRPE*NLQWTG
Trigger: ACCTGTCCATTGAAGATTTCACTCAGGCCTTTGGGA...TTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp TGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCCTCAGAAACCTGATTTaGTCTTCATGTCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: WHLPQKFVLIGTSAKFHFLRNLI*SSCLGQ
Trigger: CTGCCCAAGACATGAAGATCAAATCAGGTTTCTGAG...GAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp TGCTTCCGTTGCAGGCAGTTTGCACAATACCTAATTAACCTTCCTATTGAAAATCATCAGCTTCGGGGATaGCAATTCATTCTCTCCGTC +
Preference number: 4 (lower is better)
Translates to: CFRCRQFAQYLINLPIENHQLRG*QFILSV
Trigger: GACGGAGAGAATGAATTGGCATCCCCGAAGCTGATG...ATTTTCAATAGGAAGGTTAATTAGGTATTGTGCAAACTGCCTGCAACGGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp ACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGTTCCTGTGCAGTGGTTaGTGCGGCCTTCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TSAKFHFNWCRTNIGEKMFLCSG*CGLLLL
Trigger: GAGGAGAAGAAGGCCGCAGCAACCACTGCACAGGAA...CATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp AAGAGGGTAGTCTTGTGGACCATTCAACTCTCCTTCAGCCCTTTAACTTACCCAAGTTGTCTCCATGTGTaGTATATGTCTGAGGTGTAT +
Preference number: 4 (lower is better)
Translates to: KRVVLWTIQLSFSPLTYPSCLHV*YMSEVY
Trigger: ATACACCTCAGACATATAGCACACATGGAGACAACT...TGGGTAAGTTAAAGGGCTGAAGGAGAGTTGAATGGTCCACAAGACTACCCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp GGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAGACCCGGATCTGGACTaGTTCACCATTGTACTTCTG +
Preference number: 4 (lower is better)
Translates to: GTSAKFHFNWCRTNIGEKDPDLD*FTIVLL
Trigger: CAGAAGTACAATGGTGAACCAGTCCAGATCCGGGTC...TTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp TCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGAGGACCTCAAAGGCCTTaGTGTTGTTGGCGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: SAKFHFNWCRTNIGEKMRGPQRP*CCWRQF
Trigger: GAACTGGCGCCAACAACACCAAGGCCTTTGAGGTCC...TCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAACAGGGGGCAACAGCTaGATCTCCAAGTACATATGG +
Preference number: 4 (lower is better)
Translates to: GTSAKFHFNWCRTNIGEKTGGNS*ISKYIW
Trigger: CCATATGTACTTGGAGATCCAGCTGTTGCCCCCTGT...TTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR CAA 72 bp TTTGGGACTCAAATTTTACTTGATGTCTGTCCATTCTaGTGGCCCTATCAGCCTTCTCCTTCCTTTACTCCT +
Preference number: 4 (lower is better)
Translates to: FGTQILLDVCPF*WPYQPSPSFTP
Trigger: AGGAGTAAAGGAAGGAGAAGGCTGATAGGGCCACAAGAATGGACAGACATCAAGTAAAATTTGAGTCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR CAA 72 bp GCTCATGTACTTGCATGTTTGGGACTCAAATTTTACTaGATGTCTGTCCATTCTTGTGGCCCTATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: AHVLACLGLKFY*MSVHSCGPISL
Trigger: AAGGCTGATAGGGCCACAAGAATGGACAGACATCAAGTAAAATTTGAGTCCCAAACATGCAAGTACATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp GCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAACCAAGTCATCCTGATTaGAGTCAGGGATCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: AHLQNFTSIGVGLISVRKPSHPD*SQGSLW
Trigger: CCACAGAGATCCCTGACTTCAATCAGGATGACTTGG...TTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp CATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATGGTTGGGAGAGGGAGTaGAGTAGCATATGCATTTCA +
Preference number: 4 (lower is better)
Translates to: HLPQKFVLIGTSAKFHFNGWERE*SSICIS
Trigger: TGAAATGCATATGCTACTTCACTCCCTCTCCCAACC...ATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp TGTAGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGAACAAAACTGGCATTTaGCACAGAAGTTTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: CRTNIGEKMRPYNQGRVLNKTGI*HRSLCS
Trigger: TGAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTT...CAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp TCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGACCCCAGTGGAAGTGCTaGTCTCACTGGTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: SAKFHFNWCRTNIGEKMRPQWKC*SHWYCL
Trigger: CAAACAGTACCAGTGAGAGCAGCACTTCCACTGGGG...TCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp ACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGCTTCCTGTAGTCTCTTaGTGTTGGCATAGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: TSAKFHFNWCRTNIGEKMLPVVS*CWHRGP
Trigger: AGGCCCCCTATGCCAACACCAAGAGACTACAGGAAG...CATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATCCAGAAGAAGACCTaGTCCCAGACATCTAGTAGG +
Preference number: 4 (lower is better)
Translates to: GTSAKFHFNWCRTNIGEKIQKKT*SQTSSR
Trigger: CCTACTAGATGTCTGGGACCAGGTCTTCTTCTGGAT...TTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp GGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAATCTTCTCCTCCTCGTTaGCATGTTTCCCAATCCAGA +
Preference number: 4 (lower is better)
Translates to: GTSAKFHFNWCRTNIGEKSSPPR*HVSQSR
Trigger: TCTGGATTGGGAAACATGCCAACGAGGAGGAGAAGA...TTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp TCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGAGGTATTCCTGTGCAGTaGTTGCTGCGGCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SAKFHFNWCRTNIGEKMRGIPVQ*LLRPSS
Trigger: AGAAGAAGGCCGCAGCAACCACTGCACAGGAATACC...TCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp AAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCATTAAAAGGAACAGAATaGCAAACCAGTGTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: KLAFATEVCAHRHICKISLKGTE*QTSVWP
Trigger: CGGCCAGACACTGGTTTGCCATTCTGTTCCTTTTAA...TGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp GCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAAGTCTGTCCATTCTTGTaGCCCTATCAGCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: AHLQNFTSIGVGLISVRKVCPFL*PYQPSP
Trigger: AGGAGAAGGCTGATAGGGCCACAAGAATGGACAGAC...TTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp CATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATCCTTATGGCATGCTTTaGTTACTAGACTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: HLPQKFVLIGTSAKFHFNPYGML*LLDFRQ
Trigger: CTGCCTGAAGTCTAGTAATCAAAGCATGCCATAAGG...ATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp CCTCAGGATAGAAACAATCTAGCGACCTTAGAAGTTGAAATGAGGACCATAGGCACGTGTCTTTGCATTTaGGAGGCACTGTTAAAAATT +
Preference number: 4 (lower is better)
Translates to: PQDRNNLATLEVEMRTIGTCLCI*EALLKI
Trigger: AATTTTTAACAGTGCCTCTCAAATGCAAAGACACGT...GCCTATGGTCCTCATTTCAACTTCTAAGGTCGCTAGATTGTTTCTATCCTGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp CATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTTCTTGAGGTTTTGTTaGTTCCATCGAGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: HLPQKFVLIGTSAKFHFNFLRFC*FHRGRA
Trigger: TGCTCTGCCTCGATGGAAGCAACAAAACCTCAAGAA...ATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp CTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTATCAGGGTAGGGTACTaGTTTACAACCACAGCTACT +
Preference number: 4 (lower is better)
Translates to: LIGTSAKFHFNWCRTNIGIRVGY*FTTTAT
Trigger: AGTAGCTGTGGTTGTAAAGCAGTACCCTACCCTGAT...ACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp TGCTTCCGTTGCAGGCAGTTTGCACAATACCTAATTAACCTTCCTATTGAAAATGCCATAAGTCTAGATTaGCTCATGAAGCAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: CFRCRQFAQYLINLPIENAISLD*LMKQPH
Trigger: ATGAGGCTGCTTCATGAGGCAATCTAGACTTATGGC...ATTTTCAATAGGAAGGTTAATTAGGTATTGTGCAAACTGCCTGCAACGGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp CCTCAGGATAGAAACAATCTAGCGACCTTAGAAGTTGAAATGAGGACCATAGGCTCAACTACTGATAAATaGTTTGCCTCCTACCATCTA +
Preference number: 4 (lower is better)
Translates to: PQDRNNLATLEVEMRTIGSTTDK*FASYHL
Trigger: TAGATGGTAGGAGGCAAAGCATTTATCAGTAGTTGA...GCCTATGGTCCTCATTTCAACTTCTAAGGTCGCTAGATTGTTTCTATCCTGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp AAACAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATGGCCTCAGCAGTTTTaGTCAACTACTGATAAATGC +
Preference number: 4 (lower is better)
Translates to: KQNWHLPQKFVLIGTSAKWPQQF*STTDKC
Trigger: GCATTTATCAGTAGTTGAGCAAAACTGCTGAGGCCA...TTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp ACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGTCCGGTCCATTCCACTaGATGATAAGCTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: TSAKFHFNWCRTNIGEKMSGPFH*MISFPR
Trigger: CCTTGGGAAGCTTATCATCCAGTGGAATGGACCGGA...CATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp ACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGATGAAGTTCAGCGCATaGCTCATGGCTCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TSAKFHFNWCRTNIGEKMMKFSA*LMAPFF
Trigger: GAAGAAGGGAGCCATGAGCCATGCGCTGAACTTCAT...CATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CCA 90 bp AGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTAACTCTAATGTTCCATaGAGTGTTTGTGCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: RTNIGEKMRPYNQGRVLLNSNVP*SVCALL
Trigger: TAGAAGAGCACAAACACTCCATGGAACATTAGAGTT...AAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp GCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAAGTTGGCTTTCTGACATaGACTTCCTTGCAGCACTGT +
Preference number: 4 (lower is better)
Translates to: AHLQNFTSIGVGLISVRKVGFLT*TSLQHC
Trigger: ACAGTGCTGCAAGGAAGTCCATGTCAGAAAGCCAAC...TTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp GCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAAACCTGTTCAAAGTTGTaGAAATCACCTTCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: AFATEVCAHRHICKISLQTCSKL*KSPSVG
Trigger: GCCAACAGAAGGTGATTTCCACAACTTTGAACAGGT...TTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp TGTAGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGGCTTTCATGTGTGTATaGTTTAGAAGTACACTTACC +
Preference number: 4 (lower is better)
Translates to: CRTNIGEKMRPYNQGRVLAFMCV*FRSTLT
Trigger: GGTAAGTGTACTTCTAAACCATACACACATGAAAGC...CAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp CTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTTACACTTTGCCTAATTaGGCCACTACCAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LIGTSAKFHFNWCRTNIGYTLPN*ATTRFS
Trigger: AGAAAACCTGGTAGTGGCTCAATTAGGCAAAGTGTA...ACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp CAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTAACAAAACTGGCATTTaGCACAGAAGTTTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: QNWHLPQKFVLIGTSAKFNKTGI*HRSLCS
Trigger: TGAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTT...AAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp CATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATACTAGGCTCTTGCTTTaGCTCATTATTAAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: HLPQKFVLIGTSAKFHFNTRLLL*LIIKGW
Trigger: CCAACCCTTAATAATGAGGCAAAGCAAGAGCCTAGT...ATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp TGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCTATAGGTATGTCCATTaGCATAAGAATAGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: WHLPQKFVLIGTSAKFHFYRYVH*HKNRVG
Trigger: ACCCACTCTATTCTTATGCCAATGGACATACCTATA...GAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp AAACAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTATCCCATTTAGGGTaGTTGGAGGGCCTTTTTAAT +
Preference number: 4 (lower is better)
Translates to: KQNWHLPQKFVLIGTSAKLSHLG*LEGLFN
Trigger: ATTAAAAAGGCCCTCCAACCACCCTAAATGGGATAA...TTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp CAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGTTTGTTTACTTGCTATaGTCTGTTCATTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: QKFVLIGTSAKFHFNWCRFVYLL*SVHSGP
Trigger: AGGCCCAGAATGAACAGACCATAGCAAGTAAACAAA...CCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp TGCTTCCGTTGCAGGCAGTTTGCACAATACCTAATTAACCTTCCTATTGAAAATAATAGTACTGAAGGTTaGAAAGTTGCATGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CFRCRQFAQYLINLPIENNSTEG*KVACGW
Trigger: CCAGCCACATGCAACTTTCCAACCTTCAGTACTATT...ATTTTCAATAGGAAGGTTAATTAGGTATTGTGCAAACTGCCTGCAACGGAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp AATGAGATTCCTACACTTTGCCTAATTGAGCCACTACCAGGTTTTCTGGCAGCTCCTACTCTTGGAACTTaGATGTATTCTAATGTAGTA +
Preference number: 4 (lower is better)
Translates to: NEIPTLCLIEPLPGFLAAPTLGT*MYSNVV
Trigger: TACTACATTAGAATACATCCAAGTTCCAAGAGTAGG...AGCTGCCAGAAAACCTGGTAGTGGCTCAATTAGGCAAAGTGTAGGAATCTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
3UTR CAA 72 bp ACATTCTTGCTGATACTTGTAACAACCTGTTCAAAGTaGTGGAAATCACCTTCTGTTGGCTTTCTGACATGG +
Preference number: 4 (lower is better)
Translates to: TFLLILVTTCSK*WKSPSVGFLTW
Trigger: CCATGTCAGAAAGCCAACAGAAGGTGATTTCCACAACTTTGAACAGGTTGTTACAAGTATCAGCAAGAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp ACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGTCTTCCAAGTCATCCTaGTTGAAGTCAGGGATCTCT +
Preference number: 4 (lower is better)
Translates to: TSAKFHFNWCRTNIGEKMSSKSS*LKSGIS
Trigger: AGAGATCCCTGACTTCAATCAGGATGACTTGGAAGA...CATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp GCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAAATATCGGTGAGAAAATaGGACCCTACAATCAGGGTA +
Preference number: 4 (lower is better)
Translates to: AHLQNFTSIGVGLISVRKISVRK*DPTIRV
Trigger: TACCCTGATTGTAGGGTCTCATTTTCTCACCGATAT...TTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp CAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGGGGGTATCATCTTTCTaGAGGAATAGGTACATTATT +
Preference number: 4 (lower is better)
Translates to: QKFVLIGTSAKFHFNWCRGVSSF*RNRYII
Trigger: AATAATGTACCTATTCCTTCAGAAAGATGATACCCC...CCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR TCA 90 bp TCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGAGGCCGTAGTCCCCATTaGTTCCTGTTATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: SAKFHFNWCRTNIGEKMRGRSPH*FLLFSS
Trigger: AGATGAAAATAACAGGAATCAATGGGGACTACGGCC...TCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp CCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTTGTGTGCTATATGTCTaGGGTGTATGGAGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: PQKFVLIGTSAKFHFNWCCVLYV*GVWSFY
Trigger: ATAAAAACTCCATACACCTCAGACATATAGCACACA...ACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp AAACAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAAGACTCAAATTTTACTTaGTGTCTGTCCATTCTTGTG +
Preference number: 4 (lower is better)
Translates to: KQNWHLPQKFVLIGTSAKDSNFT*CLSILV
Trigger: CACAAGAATGGACAGACATCAAGTAAAATTTGAGTC...TTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp CATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATCTTACCTCAGAAACCTaGTTTGATCTTCATGTCTTG +
Preference number: 4 (lower is better)
Translates to: HLPQKFVLIGTSAKFHFNLTSET*FDLHVL
Trigger: CAAGACATGAAGATCAAATCAGGTTTCTGAGGTAAG...ATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp ACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGATCAGGGTAGGGTACTaGTTTACAACCACAGCTACT +
Preference number: 4 (lower is better)
Translates to: TSAKFHFNWCRTNIGEKMIRVGY*FTTTAT
Trigger: AGTAGCTGTGGTTGTAAAGCAGTACCCTACCCTGAT...CATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp CAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTGCTCATAGGCACATCTaGAAAATTTCACTTCAATTG +
Preference number: 4 (lower is better)
Translates to: QNWHLPQKFVLIGTSAKFAHRHI*KISLQL
Trigger: CAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGC...AAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp CCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTTCCATGGAGTGTTTGTaGTCTTCTAAGAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: PQKFVLIGTSAKFHFNWCSMECL*SSKKRK
Trigger: TTTTCTCTTCTTAGAAGAGCACAAACACTCCATGGA...ACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCATCATCACAGAAGATaGAACATCTTTTCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNHHHRR*NIFSER
Trigger: TCTTTCAGAAAAGATGTTGCATCTTCTGTGATGATG...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp TGCAGGCAGTTTGCACAATACCTAATTAACCTTCCTATTGAAAATACCAAATGTAAGAGGGTAGTCTTGTaGACCATTCAACTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: CRQFAQYLINLPIENTKCKRVVL*TIQLSF
Trigger: GAAGGAGAGTTGAATGGTCCACAAGACTACCCTCTT...ACATTTGGTATTTTCAATAGGAAGGTTAATTAGGTATTGTGCAAACTGCCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACAAAGTTGCATGTGGCTaGATGCTGTTAATTTCTTTA +
Preference number: 4 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNKVACG*MLLISL
Trigger: TAAAGAAATTAACAGCATCCAGCCACATGCAACTTT...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp CATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTTGGAAAGTTGCATGTaGCTGGATGCTGTTAATTTC +
Preference number: 4 (lower is better)
Translates to: HLPQKFVLIGTSAKFHFNLESCM*LDAVNF
Trigger: GAAATTAACAGCATCCAGCCACATGCAACTTTCCAA...ATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR TCA 90 bp CTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTCATTTTGCTTTATACTaGGTAATGCACTCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: LIGTSAKFHFNWCRTNIGHFALY*VMHSCK
Trigger: CTTGCAAGAGTGCATTACTCAGTATAAAGCAAAATG...ACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR GCA 90 bp GCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGACCCGCTCATAGGCACATCTaGAAAATTTCACTTCAATTG +
Preference number: 4 (lower is better)
Translates to: AKFHFNWCRTNIGEKMRPAHRHI*KISLQL
Trigger: CAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGC...GGGTCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR GCA 90 bp TCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGAGAGATTCCTACACTTTaGCTAATTGAGCCACTACCA +
Preference number: 4 (lower is better)
Translates to: SAKFHFNWCRTNIGEKMREIPTL*LIEPLP
Trigger: TGGTAGTGGCTCAATTAGGCAAAGTGTAGGAATCTC...TCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp CAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGCAATCATTCACCTTATaGCATGCTTTGATTACTAGA +
Preference number: 4 (lower is better)
Translates to: QKFVLIGTSAKFHFNWCRQSFTL*HALITR
Trigger: TCTAGTAATCAAAGCATGCCATAAGGTGAATGATTG...CCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp TCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGAAGTGGAGATTTCAGCTaGACTATGTTGATGGGGTTT +
Preference number: 4 (lower is better)
Translates to: SAKFHFNWCRTNIGEKMRSGDFS*TMLMGF
Trigger: AAACCCCATCAACATAGTCCAGCTGAAATCTCCACT...TCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp CATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTTGATCTTCATGTCTTaGGCAGGAGTTGTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: HLPQKFVLIGTSAKFHFNLIFMS*AGVVEN
Trigger: ATTTTCAACAACTCCTGCCCAAGACATGAAGATCAA...ATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp GCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAAGGAGCCTCTTTGGTTTaGTTTGATTTTGCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: AHLQNFTSIGVGLISVRKGASLV*FDFAWK
Trigger: TTTCCAAGCAAAATCAAACCAAACCAAAGAGGCTCC...TTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp TGCTTCCGTTGCAGGCAGTTTGCACAATACCTAATTAACCTTCCTATTGAAAATTCTTTGAATTATAAATaGCCTCAGCAGTTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: CFRCRQFAQYLINLPIENSLNYK*PQQFCS
Trigger: TGAGCAAAACTGCTGAGGCCATTTATAATTCAAAGA...ATTTTCAATAGGAAGGTTAATTAGGTATTGTGCAAACTGCCTGCAACGGAAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CCA 90 bp GCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATCTTTATGTTTTGTATaGAGCGGCACTTTTATCTGT +
Preference number: 4 (lower is better)
Translates to: AHLQNFTSIGVGLISVRKSLCFV*SGTFIC
Trigger: ACAGATAAAAGTGCCGCTCCATACAAAACATAAAGA...TTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS GCA 90 bp GTGCCGGCTCCACCACCGTGTCGGGCACGGCCGCCTTCAGCTCCCTaGGCTTGCCCAGCACGTGGTTCATCACCTCCATCAGCTTCGGGG +
Preference number: 5 (lower is better)
Translates to: VPAPPPCRARPPSAP*ACPARGSSPPSASG
Trigger: CCCCGAAGCTGATGGAGGTGATGAACCACGTGCTGGGCAAGCGCAGGGAGCTGAAGGCGGCCGTGCCCGACACGGTGGTGGAGCCGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000440053.1
CDS GCA 90 bp GCTCCACCACCGTGTCGGGCACGGCCGCCTTCAGCTCCCTGCGCTTaGCCAGCACGTGGTTCATCACCTCCATCAGCTTCGGGGATGCCA +
Preference number: 5 (lower is better)
Translates to: APPPCRARPPSAPCA*PARGSSPPSASGMP
Trigger: TGGCATCCCCGAAGCTGATGGAGGTGATGAACCACGTGCTGGGCAAGCGCAGGGAGCTGAAGGCGGCCGTGCCCGACACGGTGGTGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000440053.1
CDS GCA 90 bp CCCCTCGGAGTCAGACACATGGTACAGTTTGAGTGCAGCCTTGAGTaGCGGCTCCACCACCGTGTCGGGCACGGCCGCCTTCAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: PLGVRHMVQFECSLE*RLHHRVGHGRLQLP
Trigger: AGGGAGCTGAAGGCGGCCGTGCCCGACACGGTGGTGGAGCCGGCACTCAAGGCTGCACTCAAACTGTACCATGTGTCTGACTCCGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000440053.1
CDS CCA 90 bp CTGGCTCCTGCCCTTCCACCACCACTTGCTTCTCCGTCCGGGAGATaGTGTCAGCAACCATCTTGGCCATCTCCCGCTCGTCCCCGCTAC +
Preference number: 5 (lower is better)
Translates to: LAPALPPPLASPSGR*CQQPSWPSPARPRY
Trigger: GTAGCGGGGACGAGCGGGAGATGGCCAAGATGGTTGCTGACACCATCTCCCGGACGGAGAAGCAAGTGGTGGTGGAAGGGCAGGAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS CCA 90 bp CGCGCTGGGACCTCAAAGGCCTTGGTGTTGTTGGCGCCAGTTCCCTaGACCTGGAACAGCCGTGTGGAGGGCCCGGTCTCCAAGTTGTTA +
Preference number: 5 (lower is better)
Translates to: RAGTSKALVLLAPVP*TWNSRVEGPVSKLL
Trigger: TAACAACTTGGAGACCGGGCCCTCCACACGGCTGTTCCAGGTCCAGGGAACTGGCGCCAACAACACCAAGGCCTTTGAGGTCCCAGCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS GCA 90 bp TCGGGGATGCCAATTCATTCTCTCCGTCCACCACGCCTACATAGGTaGGCCCTCCCCGCTCCTGGTCTCGGATCTCCTTGGCCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: SGMPIHSLRPPRLHR*ALPAPGLGSPWPES
Trigger: TGACTCTGGCCAAGGAGATCCGAGACCAGGAGCGGGGAGGGCGCACCTATGTAGGCGTGGTGGACGGAGAGAATGAATTGGCATCCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000440053.1
CDS CCA 90 bp GTGTCGGGCACGGCCGCCTTCAGCTCCCTGCGCTTGCCCAGCACGTaGTTCATCACCTCCATCAGCTTCGGGGATGCCAATTCATTCTCT +
Preference number: 5 (lower is better)
Translates to: VSGTAAFSSLRLPST*FITSISFGDANSFS
Trigger: AGAGAATGAATTGGCATCCCCGAAGCTGATGGAGGTGATGAACCACGTGCTGGGCAAGCGCAGGGAGCTGAAGGCGGCCGTGCCCGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000440053.1
CDS CCA 90 bp GGGACCTCAAAGGCCTTGGTGTTGTTGGCGCCAGTTCCCTGGACCTaGAACAGCCGTGTGGAGGGCCCGGTCTCCAAGTTGTTAGTTCGG +
Preference number: 5 (lower is better)
Translates to: GTSKALVLLAPVPWT*NSRVEGPVSKLLVR
Trigger: CCGAACTAACAACTTGGAGACCGGGCCCTCCACACGGCTGTTCCAGGTCCAGGGAACTGGCGCCAACAACACCAAGGCCTTTGAGGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS GCA 90 bp GCGCTTGCCCAGCACGTGGTTCATCACCTCCATCAGCTTCGGGGATaGCAATTCATTCTCTCCGTCCACCACGCCTACATAGGTGCGCCC +
Preference number: 5 (lower is better)
Translates to: ALAQHVVHHLHQLRG*QFILSVHHAYIGAP
Trigger: GGGCGCACCTATGTAGGCGTGGTGGACGGAGAGAATGAATTGGCATCCCCGAAGCTGATGGAGGTGATGAACCACGTGCTGGGCAAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000440053.1
CDS CCA 90 bp GTCCAGGATGTAACAGTCCTCGTGACTGAGCAGGTCCTGTGTCAGTaGCCGTGTGGCGACTTCCCTCACCACCAGATTCCCCTCGGAGTC +
Preference number: 5 (lower is better)
Translates to: VQDVTVLVTEQVLCQ*PCGDFPHHQIPLGV
Trigger: GACTCCGAGGGGAATCTGGTGGTGAGGGAAGTCGCCACACGGCCACTGACACAGGACCTGCTCAGTCACGAGGACTGTTACATCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000440053.1
CDS CCA 90 bp CCACCACTTGCTTCTCCGTCCGGGAGATGGTGTCAGCAACCATCTTaGCCATCTCCCGCTCGTCCCCGCTACAACCCTTCCCACACCATA +
Preference number: 5 (lower is better)
Translates to: PPLASPSGRWCQQPS*PSPARPRYNPSHTI
Trigger: TATGGTGTGGGAAGGGTTGTAGCGGGGACGAGCGGGAGATGGCCAAGATGGTTGCTGACACCATCTCCCGGACGGAGAAGCAAGTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS CCA 90 bp TGCTTCACCACAATGATGGGGGTCTCAGGGTCACGCCCGCTGGGATaGGTCTTGAGGTATTCCTGTGCAGTGGTTGCTGCGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: CFTTMMGVSGSRPLG*VLRYSCAVVAAAFF
Trigger: GAAGAAGGCCGCAGCAACCACTGCACAGGAATACCTCAAGACCCATCCCAGCGGGCGTGACCCTGAGACCCCCATCATTGTGGTGAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS GCA 90 bp ACTTCACCTGTTCCACTTTGGCCACGGAGCCCACAGTGTGGGTTTTaGCTAGGCCTGAGGTCCGGTTGGACGCTGTCCACTTCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: TSPVPLWPRSPQCGF*LGLRSGWTLSTSGR
Trigger: TCTTCCAGAAGTGGACAGCGTCCAACCGGACCTCAGGCCTAGGCAAAACCCACACTGTGGGCTCCGTGGCCAAAGTGGAACAGGTGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS GCA 90 bp GTCACGCCCGCTGGGATGGGTCTTGAGGTATTCCTGTGCAGTGGTTaGTGCGGCCTTCTTCTCCTCCTCGTTGGCATGTTTCCCAATCCA +
Preference number: 5 (lower is better)
Translates to: VTPAGMGLEVFLCSG*CGLLLLLVGMFPNP
Trigger: TGGATTGGGAAACATGCCAACGAGGAGGAGAAGAAGGCCGCAGCAACCACTGCACAGGAATACCTCAAGACCCATCCCAGCGGGCGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS CCA 90 bp GGCCGACTCAGCCCCATCATTCTGCACCTCCACCTGTGTGCTTGGTaGGTACTGCTTGGCTTTGATGAAGTTCAGCGCATGGCTCATGGC +
Preference number: 5 (lower is better)
Translates to: GRLSPIILHLHLCAW*VLLGFDEVQRMAHG
Trigger: GCCATGAGCCATGCGCTGAACTTCATCAAAGCCAAGCAGTACCCACCAAGCACACAGGTGGAGGTGCAGAATGATGGGGCTGAGTCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000440053.1
CDS TCA 90 bp CATCTGTGTGGTGTAGATGGCAGCTGCCCCCTGCTCATCCAGGGATaGGTCCTGGCCAATCCAGTAGTGGATGTCATAGGACAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: HLCGVDGSCPLLIQG*VLANPVVDVIGQAA
Trigger: AGCAGCCTGTCCTATGACATCCACTACTGGATTGGCCAGGACTCATCCCTGGATGAGCAGGGGGCAGCTGCCATCTACACCACACAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000440053.1
ENST00000454069.5
CDS GCA 90 bp ACGCCCGCTGGGATGGGTCTTGAGGTATTCCTGTGCAGTGGTTGCTaGGGCCTTCTTCTCCTCCTCGTTGGCATGTTTCCCAATCCAGAA +
Preference number: 5 (lower is better)
Translates to: TPAGMGLEVFLCSGC*GLLLLLVGMFPNPE
Trigger: TTCTGGATTGGGAAACATGCCAACGAGGAGGAGAAGAAGGCCGCAGCAACCACTGCACAGGAATACCTCAAGACCCATCCCAGCGGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS CCA 90 bp GACGGCCGACTCAGCCCCATCATTCTGCACCTCCACCTGTGTGCTTaGTGGGTACTGCTTGGCTTTGATGAAGTTCAGCGCATGGCTCAT +
Preference number: 5 (lower is better)
Translates to: DGRLSPIILHLHLCA*WVLLGFDEVQRMAH
Trigger: ATGAGCCATGCGCTGAACTTCATCAAAGCCAAGCAGTACCCACCAAGCACACAGGTGGAGGTGCAGAATGATGGGGCTGAGTCGGCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000440053.1
CDS TCA 90 bp GAGGCAGAGCAGAGAAGGCAGCTGGAGTCATCCCAAAGGCCTGAGTaGAATCTTCAATGGACAGGTGTTCCTCCTTCCTGCTGGGGTCCA +
Preference number: 5 (lower is better)
Translates to: EAEQRRQLESSQRPE*NLQWTGVPPSCWGP
Trigger: TGGACCCCAGCAGGAAGGAGGAACACCTGTCCATTGAAGATTTCACTCAGGCCTTTGGGATGACTCCAGCTGCCTTCTCTGCTCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS CCA 90 bp CTGGTAGACCACCATGCGTCCCTTGAAGATGGACATAAGATGAGGTaGCTCCTTGCCCATTGGGACCCGGATCTGGACTGGTTCACCATT +
Preference number: 5 (lower is better)
Translates to: LVDHHASLEDGHKMR*LLAHWDPDLDWFTI
Trigger: AATGGTGAACCAGTCCAGATCCGGGTCCCAATGGGCAAGGAGCCACCTCATCTTATGTCCATCTTCAAGGGACGCATGGTGGTCTACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS-3UTR CAA 90 bp GGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCACAGCGTGAGTGAGCCTGTCTaGGGGAGGCAGCTGCCACCT +
Preference number: 5 (lower is better)
Translates to: GEKMRPYNQGRVLLYNHSVSEPV*GRQLPP
Trigger: AGGTGGCAGCTGCCTCCCCAAGACAGGCTCACTCAC...GCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp CCTCAGGATAGAAACAATCTAGCGACCTTAGAAGTTGAAATGAGGACCATAGGCAAGGCCTCGCTCTCGTaGCCCTGGACCTCGCGGTGC +
Preference number: 5 (lower is better)
Translates to: PQDRNNLATLEVEMRTIGKASLS*PWTSRC
Trigger: GCACCGCGAGGTCCAGGGCAACGAGAGCGAGGCCTT...GCCTATGGTCCTCATTTCAACTTCTAAGGTCGCTAGATTGTTTCTATCCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS CCA 90 bp CATAAGATGAGGTGGCTCCTTGCCCATTGGGACCCGGATCTGGACTaGTTCACCATTGTACTTCTGGTCCAGGATGACGGCTTGATAAGC +
Preference number: 5 (lower is better)
Translates to: HKMRWLLAHWDPDLD*FTIVLLVQDDGLIS
Trigger: GCTTATCAAGCCGTCATCCTGGACCAGAAGTACAATGGTGAACCAGTCCAGATCCGGGTCCCAATGGGCAAGGAGCCACCTCATCTTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS-3UTR CAA 90 bp GGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCACAGCTTCAGCTCCCTGCGCTaGCCCAGCACGTGGTTCATC +
Preference number: 5 (lower is better)
Translates to: GEKMRPYNQGRVLLYNHSFSSLR*PSTWFI
Trigger: GATGAACCACGTGCTGGGCAAGCGCAGGGAGCTGAA...GCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp GGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCACAGCCCCGGGGTGGTGATGTaGAGAGAGCCTTTGACTTGG +
Preference number: 5 (lower is better)
Translates to: GEKMRPYNQGRVLLYNHSPGVVM*REPLTW
Trigger: CCAAGTCAAAGGCTCTCTCAACATCACCACCCCGGG...GCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp GGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCACAGCCCTCCACCTGTGTGCTaGGTGGGTACTGCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: GEKMRPYNQGRVLLYNHSPPPVC*VGTAWL
Trigger: AAGCCAAGCAGTACCCACCAAGCACACAGGTGGAGG...GCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp GGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCACAGCTTCACCTGTTCCACTTaGGCCACGGAGCCCACAGTG +
Preference number: 5 (lower is better)
Translates to: GEKMRPYNQGRVLLYNHSFTCST*ATEPTV
Trigger: CACTGTGGGCTCCGTGGCCAAAGTGGAACAGGTGAA...GCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp CCTCAGGATAGAAACAATCTAGCGACCTTAGAAGTTGAAATGAGGACCATAGGCGTGGCTCCTTGCCCATaGGGACCCGGATCTGGACTG +
Preference number: 5 (lower is better)
Translates to: PQDRNNLATLEVEMRTIGVAPCP*GPGSGL
Trigger: CAGTCCAGATCCGGGTCCCAATGGGCAAGGAGCCAC...GCCTATGGTCCTCATTTCAACTTCTAAGGTCGCTAGATTGTTTCTATCCTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS TCA 90 bp TCCCAGACATCTAGTAGGAACACATCATCCTCTTCCAAGTCATCCTaGTTGAAGTCAGGGATCTCTGTGGCCAGGAAGCGCCCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: SQTSSRNTSSSSKSS*LKSGISVARKRPVL
Trigger: CAAGACTGGGCGCTTCCTGGCCACAGAGATCCCTGACTTCAATCAGGATGACTTGGAAGAGGATGATGTGTTCCTACTAGATGTCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp GGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCACAGCAGGCTGCTGGCTGTCTaGTGGATAGCCAGGATGATG +
Preference number: 5 (lower is better)
Translates to: GEKMRPYNQGRVLLYNHSRLLAV*WIARMM
Trigger: CATCATCCTGGCTATCCACAAGACAGCCAGCAGCCT...GCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp TGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCCCCACAGTGTGGGTTTaGCCTAGGCCTGAGGTCCGG +
Preference number: 5 (lower is better)
Translates to: WHLPQKFVLIGTSAKFHFPTVWV*PRPEVR
Trigger: CCGGACCTCAGGCCTAGGCAAAACCCACACTGTGGG...GAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp GGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCACAGCAAGTGGCCTAGCCACTaGGAATCCACAGGTACCAGC +
Preference number: 5 (lower is better)
Translates to: GEKMRPYNQGRVLLYNHSKWPSH*ESTGTS
Trigger: GCTGGTACCTGTGGATTCCAAGTGGCTAGGCCACTT...GCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp GGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCACAGCTTGGAATTGAGGAAATaGGCCCGCGCTGGGACCTCA +
Preference number: 5 (lower is better)
Translates to: GEKMRPYNQGRVLLYNHSLELRK*ARAGTS
Trigger: TGAGGTCCCAGCGCGGGCCAATTTCCTCAATTCCAA...GCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp TGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCGGGTGTGCACACCTCTaGTCCCCAGGTTTCCCTCCC +
Preference number: 5 (lower is better)
Translates to: WHLPQKFVLIGTSAKFHFGCAHL*SPGFPP
Trigger: GGGAGGGAAACCTGGGGACAAGAGGTGTGCACACCC...GAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp AAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACCCACAGTGTGGGTTTaGCCTAGGCCTGAGGTCCGG +
Preference number: 5 (lower is better)
Translates to: KLAFATEVCAHRHICKISPTVWV*PRPEVR
Trigger: CCGGACCTCAGGCCTAGGCAAAACCCACACTGTGGG...TGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACGGCCCGGTCTCCAAGTaGTTAGTTCGGGAGGTGCCT +
Preference number: 5 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNGPVSK*LVREVP
Trigger: AGGCACCTCCCGAACTAACAACTTGGAGACCGGGCC...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp ACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACGGCCCGGTCTCCAAGTaGTTAGTTCGGGAGGTGCCT +
Preference number: 5 (lower is better)
Translates to: TNIGEKMRPYNQGRVLLYGPVSK*LVREVP
Trigger: AGGCACCTCCCGAACTAACAACTTGGAGACCGGGCC...GTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp TGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCGTGTCAGCAACCATCTaGGCCATCTCCCGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: WHLPQKFVLIGTSAKFHFVSATI*AISRSS
Trigger: GGACGAGCGGGAGATGGCCAAGATGGTTGCTGACAC...GAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp ACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACCCCTTCCACCACCACTaGCTTCTCCGTCCGGGAGAT +
Preference number: 5 (lower is better)
Translates to: TNIGEKMRPYNQGRVLLYPFHHH*LLRPGD
Trigger: ATCTCCCGGACGGAGAAGCAAGTGGTGGTGGAAGGG...GTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp CCTCAGGATAGAAACAATCTAGCGACCTTAGAAGTTGAAATGAGGACCATAGGCGGACCAGGTTCCAGGTaGGTCCAGTCAGATGCCAGA +
Preference number: 5 (lower is better)
Translates to: PQDRNNLATLEVEMRTIGGPGSR*VQSDAR
Trigger: TCTGGCATCTGACTGGACCAACCTGGAACCTGGTCC...GCCTATGGTCCTCATTTCAACTTCTAAGGTCGCTAGATTGTTTCTATCCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp ACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACGGGGCAGTTAGCATGTaGGGGCCAGGAAGGGACAAG +
Preference number: 5 (lower is better)
Translates to: TNIGEKMRPYNQGRVLLYGAVSM*GPGRDK
Trigger: CTTGTCCCTTCCTGGCCCCAACATGCTAACTGCCCC...GTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp ACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACACTTGGGCGCTCAGCTaGGTCATGGTGAGTGAGCCT +
Preference number: 5 (lower is better)
Translates to: TNIGEKMRPYNQGRVLLYTWALS*VMVSEP
Trigger: AGGCTCACTCACCATGACCAAGCTGAGCGCCCAAGT...GTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp TGTAGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCCGGATCACAAGGCCTaGCTTGAAGTAGCCTCGGAA +
Preference number: 5 (lower is better)
Translates to: CRTNIGEKMRPYNQGRVLPDHKA*LEVASE
Trigger: TTCCGAGGCTACTTCAAGCAAGGCCTTGTGATCCGG...CAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp CCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTTGGTCTCGGATCTCCTaGGCCAGAGTCATGCCCCTG +
Preference number: 5 (lower is better)
Translates to: PQKFVLIGTSAKFHFNWCWSRIS*ARVMPL
Trigger: CAGGGGCATGACTCTGGCCAAGGAGATCCGAGACCA...ACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp GTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCAGGCCTGAGGTCCGGTaGGACGCTGTCCACTTCTGG +
Preference number: 5 (lower is better)
Translates to: VLIGTSAKFHFNWCRTNIRPEVR*DAVHFW
Trigger: CCAGAAGTGGACAGCGTCCAACCGGACCTCAGGCCT...GATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp CTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGTGGCTCCTTGCCCATaGGGACCCGGATCTGGACTG +
Preference number: 5 (lower is better)
Translates to: LIGTSAKFHFNWCRTNIGVAPCP*GPGSGL
Trigger: CAGTCCAGATCCGGGTCCCAATGGGCAAGGAGCCAC...ACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp TGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCTCAAAGGCCTTGGTGTaGTTGGCGCCAGTTCCCTGG +
Preference number: 5 (lower is better)
Translates to: WHLPQKFVLIGTSAKFHFSKALV*LAPVPW
Trigger: CCAGGGAACTGGCGCCAACAACACCAAGGCCTTTGA...GAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp GCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAAGTGTCAGCAACCATCTaGGCCATCTCCCGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: AFATEVCAHRHICKISLQVSATI*AISRSS
Trigger: GGACGAGCGGGAGATGGCCAAGATGGTTGCTGACAC...TTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp CCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTCCCTTCCACCACCACTaGCTTCTCCGTCCGGGAGAT +
Preference number: 5 (lower is better)
Translates to: PQKFVLIGTSAKFHFNWCPFHHH*LLRPGD
Trigger: ATCTCCCGGACGGAGAAGCAAGTGGTGGTGGAAGGG...ACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp GTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCAGGGCCATCCAGAAGTaGGCTGGCTCCTGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: VLIGTSAKFHFNWCRTNIRAIQK*AGSCPS
Trigger: GGAAGGGCAGGAGCCAGCCAACTTCTGGATGGCCCT...GATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp GGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCACAGCCACATTGTGATCAGTTaGCCCAGAATTGGGGATGGG +
Preference number: 5 (lower is better)
Translates to: GEKMRPYNQGRVLLYNHSHIVIS*PRIGDG
Trigger: CCCATCCCCAATTCTGGGCAAACTGATCACAATGTG...GCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp GGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAAGTTTGAGTGCAGCCTaGAGTGCCGGCTCCACCACC +
Preference number: 5 (lower is better)
Translates to: GTSAKFHFNWCRTNIGEKSLSAA*SAGSTT
Trigger: GGTGGTGGAGCCGGCACTCAAGGCTGCACTCAAACT...TTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp AAGAGGGTAGTCTTGTGGACCATTCAACTCTCCTTCAGCCCTTTAACTTACCCACTTGGTGGGTACTGCTaGGCTTTGATGAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: KRVVLWTIQLSFSPLTYPLGGYC*ALMKFS
Trigger: GCTGAACTTCATCAAAGCCAAGCAGTACCCACCAAG...TGGGTAAGTTAAAGGGCTGAAGGAGAGTTGAATGGTCCACAAGACTACCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp GCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAAAGGCCTGAGGTCCGGTaGGACGCTGTCCACTTCTGG +
Preference number: 5 (lower is better)
Translates to: AHLQNFTSIGVGLISVRKRPEVR*DAVHFW
Trigger: CCAGAAGTGGACAGCGTCCAACCGGACCTCAGGCCT...TTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp TGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCTGCTGTAATTTCATCTaGGCTGGCCTGGCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: WHLPQKFVLIGTSAKFHFCCNFI*AGLAAL
Trigger: CAGGGCAGCCAGGCCAGCCAAGATGAAATTACAGCA...GAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp CTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTAAGGCCTTGGTGTTGTaGGCGCCAGTTCCCTGGACC +
Preference number: 5 (lower is better)
Translates to: LIGTSAKFHFNWCRTNIGKALVL*APVPWT
Trigger: GGTCCAGGGAACTGGCGCCAACAACACCAAGGCCTT...ACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp CAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTTCAAAGGCCTTGGTGTaGTTGGCGCCAGTTCCCTGG +
Preference number: 5 (lower is better)
Translates to: QNWHLPQKFVLIGTSAKFSKALV*LAPVPW
Trigger: CCAGGGAACTGGCGCCAACAACACCAAGGCCTTTGA...AAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp GCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAAAGGGCCATCCAGAAGTaGGCTGGCTCCTGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: AHLQNFTSIGVGLISVRKRAIQK*AGSCPS
Trigger: GGAAGGGCAGGAGCCAGCCAACTTCTGGATGGCCCT...TTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp ACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACATTCCTGTGCAGTGGTaGCTGCGGCCTTCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: TNIGEKMRPYNQGRVLLYIPVQW*LRPSSP
Trigger: AGGAGAAGAAGGCCGCAGCAACCACTGCACAGGAAT...GTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp TGTAGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGTTGGTGTTACTCCACTaGAAGGGATCCCAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: CRTNIGEKMRPYNQGRVLLVLLH*KGSQAR
Trigger: CCTGGCTTGGGATCCCTTCAAGTGGAGTAACACCAA...CAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp ATCTACTTCTTTGACTACCAGTGGAGATTTCAGCTGGACTATGTTGATGGGGTTAGCTCCTCTACAGGCTaGTTCACTAGCTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: IYFFDYQWRFQLDYVDGVSSSTG*FTSCSR
Trigger: CCTGGAGCAGCTAGTGAACAAGCCTGTAGAGGAGCT...AACCCCATCAACATAGTCCAGCTGAAATCTCCACTGGTAGTCAAAGAAGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp TGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAGCTCCTCTACAGGCTaGTTCACTAGCTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: WHLPQKFVLIGTSAKFHFSSSTG*FTSCSR
Trigger: CCTGGAGCAGCTAGTGAACAAGCCTGTAGAGGAGCT...GAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp CATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATGCTACCACGTTCCTCTaGCCCTTGACATGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: HLPQKFVLIGTSAKFHFNATTFL*PLTCSS
Trigger: GCTGCTGCATGTCAAGGGCAAGAGGAACGTGGTAGC...ATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp ACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACGGGTACTGCTTGGCTTaGATGAAGTTCAGCGCATGG +
Preference number: 5 (lower is better)
Translates to: TNIGEKMRPYNQGRVLLYGYCLA*MKFSAW
Trigger: CCATGCGCTGAACTTCATCAAAGCCAAGCAGTACCC...GTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp CATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATCCTCCACCTGTGTGCTaGGTGGGTACTGCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: HLPQKFVLIGTSAKFHFNPPPVC*VGTAWL
Trigger: AAGCCAAGCAGTACCCACCAAGCACACAGGTGGAGG...ATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp GGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAATTCACCTGTTCCACTTaGGCCACGGAGCCCACAGTG +
Preference number: 5 (lower is better)
Translates to: GTSAKFHFNWCRTNIGEKFTCST*ATEPTV
Trigger: CACTGTGGGCTCCGTGGCCAAAGTGGAACAGGTGAA...TTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp TGCTTCCGTTGCAGGCAGTTTGCACAATACCTAATTAACCTTCCTATTGAAAATGGGACCTCAAAGGCCTaGGTGTTGTTGGCGCCAGTT +
Preference number: 5 (lower is better)
Translates to: CFRCRQFAQYLINLPIENGTSKA*VLLAPV
Trigger: AACTGGCGCCAACAACACCAAGGCCTTTGAGGTCCC...ATTTTCAATAGGAAGGTTAATTAGGTATTGTGCAAACTGCCTGCAACGGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp AAACAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAAAAGCGCCCAGTCTTGTaGGAACACTCAAAGAGCCGG +
Preference number: 5 (lower is better)
Translates to: KQNWHLPQKFVLIGTSAKKRPVL*EHSKSR
Trigger: CCGGCTCTTTGAGTGTTCCAACAAGACTGGGCGCTT...TTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp ATCTACTTCTTTGACTACCAGTGGAGATTTCAGCTGGACTATGTTGATGGGGTTTTGAACACGTCCACTTaGGGGCTTGTGACCTCAGCA +
Preference number: 5 (lower is better)
Translates to: IYFFDYQWRFQLDYVDGVLNTST*GLVTSA
Trigger: TGCTGAGGTCACAAGCCCCAAAGTGGACGTGTTCAA...AACCCCATCAACATAGTCCAGCTGAAATCTCCACTGGTAGTCAAAGAAGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp CCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTGGGTACTGCTTGGCTTaGATGAAGTTCAGCGCATGG +
Preference number: 5 (lower is better)
Translates to: PQKFVLIGTSAKFHFNWCGYCLA*MKFSAW
Trigger: CCATGCGCTGAACTTCATCAAAGCCAAGCAGTACCC...ACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACCTTGGTGGGTACTGCTaGGCTTTGATGAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNLGGYC*ALMKFS
Trigger: GCTGAACTTCATCAAAGCCAAGCAGTACCCACCAAG...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp GGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAAAGTGGCCTAGCCACTaGGAATCCACAGGTACCAGC +
Preference number: 5 (lower is better)
Translates to: GTSAKFHFNWCRTNIGEKKWPSH*ESTGTS
Trigger: GCTGGTACCTGTGGATTCCAAGTGGCTAGGCCACTT...TTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp GTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCTGCTGTAATTTCATCTaGGCTGGCCTGGCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: VLIGTSAKFHFNWCRTNICCNFI*AGLAAL
Trigger: CAGGGCAGCCAGGCCAGCCAAGATGAAATTACAGCA...GATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp ACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAAGGCCTTGGTGTTGTaGGCGCCAGTTCCCTGGACC +
Preference number: 5 (lower is better)
Translates to: TSAKFHFNWCRTNIGEKMKALVL*APVPWT
Trigger: GGTCCAGGGAACTGGCGCCAACAACACCAAGGCCTT...CATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp GCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAAGGGACCTCAAAGGCCTaGGTGTTGTTGGCGCCAGTT +
Preference number: 5 (lower is better)
Translates to: AHLQNFTSIGVGLISVRKGTSKA*VLLAPV
Trigger: AACTGGCGCCAACAACACCAAGGCCTTTGAGGTCCC...TTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp TGTAGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCAGCAAGACTGGGTCTaGAGGACAAAGACATCATTG +
Preference number: 5 (lower is better)
Translates to: CRTNIGEKMRPYNQGRVLQQDWV*RTKTSL
Trigger: CAATGATGTCTTTGTCCTCAAGACCCAGTCTTGCTG...CAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp CATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATAAGCGCCCAGTCTTGTaGGAACACTCAAAGAGCCGG +
Preference number: 5 (lower is better)
Translates to: HLPQKFVLIGTSAKFHFNKRPVL*EHSKSR
Trigger: CCGGCTCTTTGAGTGTTCCAACAAGACTGGGCGCTT...ATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACTTCTTCTCCTCCTCGTaGGCATGTTTCCCAATCCAG +
Preference number: 5 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNFFSSS*ACFPIQ
Trigger: CTGGATTGGGAAACATGCCAACGAGGAGGAGAAGAA...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp GCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGACCCATTCCTGTGCAGTGGTaGCTGCGGCCTTCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: AKFHFNWCRTNIGEKMRPIPVQW*LRPSSP
Trigger: AGGAGAAGAAGGCCGCAGCAACCACTGCACAGGAAT...GGGTCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp AAACAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTGAACACGTCCACTTaGGGGCTTGTGACCTCAGCA +
Preference number: 5 (lower is better)
Translates to: KQNWHLPQKFVLIGTSAKLNTST*GLVTSA
Trigger: TGCTGAGGTCACAAGCCCCAAAGTGGACGTGTTCAA...TTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp AAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCAGGCCCAGAACTGAGGTaGCTGTTAGCATTGAACACG +
Preference number: 5 (lower is better)
Translates to: KLAFATEVCAHRHICKISGPELR*LLALNT
Trigger: CGTGTTCAATGCTAACAGCAACCTCAGTTCTGGGCC...TGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp AAGAGGGTAGTCTTGTGGACCATTCAACTCTCCTTCAGCCCTTTAACTTACCCATTTGTAAACCTAGCATaGGCCTTCACTAGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: KRVVLWTIQLSFSPLTYPFVNLA*AFTRLL
Trigger: CAAGAGCCTAGTGAAGGCCAATGCTAGGTTTACAAA...TGGGTAAGTTAAAGGGCTGAAGGAGAGTTGAATGGTCCACAAGACTACCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp TGCTTCCGTTGCAGGCAGTTTGCACAATACCTAATTAACCTTCCTATTGAAAATATGTTGAGAGAGCCTTaGACTTGGGCGCTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: CFRCRQFAQYLINLPIENMLREP*TWALSL
Trigger: CAAGCTGAGCGCCCAAGTCAAAGGCTCTCTCAACAT...ATTTTCAATAGGAAGGTTAATTAGGTATTGTGCAAACTGCCTGCAACGGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp CAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTTGGACTGGTTCACCATaGTACTTCTGGTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: QNWHLPQKFVLIGTSAKFWTGSP*YFWSRM
Trigger: CATCCTGGACCAGAAGTACAATGGTGAACCAGTCCA...AAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp CATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATAGGAAGCGCCCAGTCTaGTTGGAACACTCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: HLPQKFVLIGTSAKFHFNRKRPV*LEHSKS
Trigger: GCTCTTTGAGTGTTCCAACAAGACTGGGCGCTTCCT...ATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp GGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAATTGGTGTTACTCCACTaGAAGGGATCCCAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: GTSAKFHFNWCRTNIGEKLVLLH*KGSQAR
Trigger: CCTGGCTTGGGATCCCTTCAAGTGGAGTAACACCAA...TTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp CAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTAGGTTGCTGTTAGCATaGAACACGTCCACTTTGGGG +
Preference number: 5 (lower is better)
Translates to: QNWHLPQKFVLIGTSAKFRLLLA*NTSTLG
Trigger: CCCCAAAGTGGACGTGTTCAATGCTAACAGCAACCT...AAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp CAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCTGAAGGTTGGAAAGTaGCATGTGGCTGGATGCTGT +
Preference number: 5 (lower is better)
Translates to: QNWHLPQKFVLIGTSAKFLKVGK*HVAGCC
Trigger: ACAGCATCCAGCCACATGCAACTTTCCAACCTTCAG...AAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp CCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTGATGTCTGTCCATTCTaGTGGCCCTATCAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: PQKFVLIGTSAKFHFNWCDVCPF*WPYQPS
Trigger: AGAAGGCTGATAGGGCCACAAGAATGGACAGACATC...ACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp CAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTAAAACATCCCCTCGGTaGAAACTCTTCCAGGACATC +
Preference number: 5 (lower is better)
Translates to: QNWHLPQKFVLIGTSAKFKTSPR*KLFQDI
Trigger: GATGTCCTGGAAGAGTTTCAACCGAGGGGATGTTTT...AAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp CTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTTGGACTGGTTCACCATaGTACTTCTGGTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: LIGTSAKFHFNWCRTNIGWTGSP*YFWSRM
Trigger: CATCCTGGACCAGAAGTACAATGGTGAACCAGTCCA...ACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp AGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTAGGACAAAGACATCATaGGAATTGAGGAAATTGGCC +
Preference number: 5 (lower is better)
Translates to: RTNIGEKMRPYNQGRVLLRTKTS*ELRKLA
Trigger: GGCCAATTTCCTCAATTCCAATGATGTCTTTGTCCT...AAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp CAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCAGCAAGACTGGGTCTaGAGGACAAAGACATCATTG +
Preference number: 5 (lower is better)
Translates to: QNWHLPQKFVLIGTSAKFQQDWV*RTKTSL
Trigger: CAATGATGTCTTTGTCCTCAAGACCCAGTCTTGCTG...AAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp GTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCTTCTTCTCCTCCTCGTaGGCATGTTTCCCAATCCAG +
Preference number: 5 (lower is better)
Translates to: VLIGTSAKFHFNWCRTNIFFSSS*ACFPIQ
Trigger: CTGGATTGGGAAACATGCCAACGAGGAGGAGAAGAA...GATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp TGCTTCCGTTGCAGGCAGTTTGCACAATACCTAATTAACCTTCCTATTGAAAATAGGTTGCTGTTAGCATaGAACACGTCCACTTTGGGG +
Preference number: 5 (lower is better)
Translates to: CFRCRQFAQYLINLPIENRLLLA*NTSTLG
Trigger: CCCCAAAGTGGACGTGTTCAATGCTAACAGCAACCT...ATTTTCAATAGGAAGGTTAATTAGGTATTGTGCAAACTGCCTGCAACGGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp AAACAAAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCTTGAGGTTTTGTaGCTTCCATCGAGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: KQNWHLPQKFVLIGTSAKFLEVL*LPSRQS
Trigger: GCTCTGCCTCGATGGAAGCAACAAAACCTCAAGAAA...TTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp ACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACTTCTTTCTTGAGGTTTaGTTGCTTCCATCGAGGCAG +
Preference number: 5 (lower is better)
Translates to: TNIGEKMRPYNQGRVLLYFFLEV*LLPSRQ
Trigger: CTGCCTCGATGGAAGCAACAAAACCTCAAGAAAGAA...GTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp TTTGTGAAACCTCTTAAGAGGGTAGTCTTGTGGACCATTCAACTCTCCTTCAGCAAACAAAACTGGCATTaGCCACAGAAGTTTGTGCTC +
Preference number: 5 (lower is better)
Translates to: FVKPLKRVVLWTIQLSFSKQNWH*PQKFVL
Trigger: GAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTTT...GCTGAAGGAGAGTTGAATGGTCCACAAGACTACCCTCTTAAGAGGTTTCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp AGGACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTACCTTATGGCATGCTTaGATTACTAGACTTCAGGCA +
Preference number: 5 (lower is better)
Translates to: RTNIGEKMRPYNQGRVLLTLWHA*ITRLQA
Trigger: TGCCTGAAGTCTAGTAATCAAAGCATGCCATAAGGT...AAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp ATCTACTTCTTTGACTACCAGTGGAGATTTCAGCTGGACTATGTTGATGGGGTTCCTCAGAAACCTGATTaGATCTTCATGTCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: IYFFDYQWRFQLDYVDGVPQKPD*IFMSWA
Trigger: TGCCCAAGACATGAAGATCAAATCAGGTTTCTGAGG...AACCCCATCAACATAGTCCAGCTGAAATCTCCACTGGTAGTCAAAGAAGTAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp CAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGTGCCATAAGTCTAGATaGCCTCATGAAGCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: QKFVLIGTSAKFHFNWCRCHKSR*PHEAAS
Trigger: TGAGGCTGCTTCATGAGGCAATCTAGACTTATGGCA...CCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp TGCTTCCGTTGCAGGCAGTTTGCACAATACCTAATTAACCTTCCTATTGAAAATAAGACATCATTGGAATaGAGGAAATTGGCCCGCGCT +
Preference number: 5 (lower is better)
Translates to: CFRCRQFAQYLINLPIENKTSLE*RKLARA
Trigger: AGCGCGGGCCAATTTCCTCAATTCCAATGATGTCTT...ATTTTCAATAGGAAGGTTAATTAGGTATTGTGCAAACTGCCTGCAACGGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp ACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGGAAGCGCCCAGTCTaGTTGGAACACTCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: TSAKFHFNWCRTNIGEKMRKRPV*LEHSKS
Trigger: GCTCTTTGAGTGTTCCAACAAGACTGGGCGCTTCCT...CATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp TCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGAGGCCCAGAACTGAGGTaGCTGTTAGCATTGAACACG +
Preference number: 5 (lower is better)
Translates to: SAKFHFNWCRTNIGEKMRGPELR*LLALNT
Trigger: CGTGTTCAATGCTAACAGCAACCTCAGTTCTGGGCC...TCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp CTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTTTTCTTGAGGTTTTGTaGCTTCCATCGAGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: LIGTSAKFHFNWCRTNIGFLEVL*LPSRQS
Trigger: GCTCTGCCTCGATGGAAGCAACAAAACCTCAAGAAA...ACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp GCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAAGCTCCAGTCCTACTCTaGGAACTTGGATGTATTCTA +
Preference number: 5 (lower is better)
Translates to: AFATEVCAHRHICKISLQAPVLL*ELGCIL
Trigger: TAGAATACATCCAAGTTCCAAGAGTAGGACTGGAGC...TTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp TCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGAGACACATGGTACAGTTaGAGTGCAGCCTGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: SAKFHFNWCRTNIGEKMRDTWYS*SAACLG
Trigger: CCCAAGACAGGCTGCACTCAAACTGTACCATGTGTC...TCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392114.6
CDS-3UTR CAA 90 bp GCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAAAAGACATCATTGGAATaGAGGAAATTGGCCCGCGCT +
Preference number: 5 (lower is better)
Translates to: AHLQNFTSIGVGLISVRKKTSLE*RKLARA
Trigger: AGCGCGGGCCAATTTCCTCAATTCCAATGATGTCTT...TTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp AAACTGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCAAAACAAAACTGGCATTaGCCACAGAAGTTTGTGCTC +
Preference number: 5 (lower is better)
Translates to: KLAFATEVCAHRHICKISKQNWH*PQKFVL
Trigger: GAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTTT...TGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp TGGCATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCATATGCATTTCATACTaGCCTTTAGGTCTCAAGCCT +
Preference number: 5 (lower is better)
Translates to: WHLPQKFVLIGTSAKFHFICISY*PLGLKP
Trigger: AGGCTTGAGACCTAAAGGCAAGTATGAAATGCATAT...GAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp CATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATCTGACATGGACTTCCTaGCAGCACTGTTACTTCTTA +
Preference number: 5 (lower is better)
Translates to: HLPQKFVLIGTSAKFHFNLTWTS*QHCYFL
Trigger: TAAGAAGTAACAGTGCTGCAAGGAAGTCCATGTCAG...ATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp AATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACAACACAACCTGTTCAAAGTaGTGGAAATCACCTTCTGTT +
Preference number: 5 (lower is better)
Translates to: NIGEKMRPYNQGRVLLYNTTCSK*WKSPSV
Trigger: AACAGAAGGTGATTTCCACAACTTTGAACAGGTTGT...GTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp ATCTACTTCTTTGACTACCAGTGGAGATTTCAGCTGGACTATGTTGATGGGGTTGAAAAGGACACATTCTaGCTGATACTTGTAACAACC +
Preference number: 5 (lower is better)
Translates to: IYFFDYQWRFQLDYVDGVEKDTF*LILVTT
Trigger: GGTTGTTACAAGTATCAGCAAGAATGTGTCCTTTTC...AACCCCATCAACATAGTCCAGCTGAAATCTCCACTGGTAGTCAAAGAAGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp CCTCAGGATAGAAACAATCTAGCGACCTTAGAAGTTGAAATGAGGACCATAGGCCTGAGTAATGCACTCTaGCAAGTGTATACAAAAACT +
Preference number: 5 (lower is better)
Translates to: PQDRNNLATLEVEMRTIGLSNAL*QVYTKT
Trigger: AGTTTTTGTATACACTTGCAAGAGTGCATTACTCAG...GCCTATGGTCCTCATTTCAACTTCTAAGGTCGCTAGATTGTTTCTATCCTGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp ACTAATATCGGTGAGAAAATGAGACCCTACAATCAGGGTAGGGTACTGCTTTACTTCTTTTACGTGTCTTaGCATTTGAGAGGCACTGTT +
Preference number: 5 (lower is better)
Translates to: TNIGEKMRPYNQGRVLLYFFYVS*HLRGTV
Trigger: AACAGTGCCTCTCAAATGCAAAGACACGTAAAAGAA...GTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp CATTTGCCACAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATAGGACAAAGACATCATaGGAATTGAGGAAATTGGCC +
Preference number: 5 (lower is better)
Translates to: HLPQKFVLIGTSAKFHFNRTKTS*ELRKLA
Trigger: GGCCAATTTCCTCAATTCCAATGATGTCTTTGTCCT...ATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp ACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGCTTAAGAGGGTAGTCTaGTGGACCATTCAACTCTCC +
Preference number: 5 (lower is better)
Translates to: TSAKFHFNWCRTNIGEKMLKRVV*WTIQLS
Trigger: GGAGAGTTGAATGGTCCACAAGACTACCCTCTTAAG...CATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp GCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAACTACCAGGAGCCTCTTaGGTTTGGTTTGATTTTGCT +
Preference number: 5 (lower is better)
Translates to: AHLQNFTSIGVGLISVRKLPGAS*VWFDFA
Trigger: AGCAAAATCAAACCAAACCAAAGAGGCTCCTGGTAG...TTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp GCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGACCCCTACTGATAAATGCTTaGCCTCCTACCATCTACCTA +
Preference number: 5 (lower is better)
Translates to: AKFHFNWCRTNIGEKMRPLLINA*PPTIYL
Trigger: TAGGTAGATGGTAGGAGGCAAAGCATTTATCAGTAG...GGGTCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp TCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGATTCTTTCTTGAGGTTTaGTTGCTTCCATCGAGGCAG +
Preference number: 5 (lower is better)
Translates to: SAKFHFNWCRTNIGEKMRFFLEV*LLPSRQ
Trigger: CTGCCTCGATGGAAGCAACAAAACCTCAAGAAAGAA...TCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS-3UTR CAA 90 bp CAGAAGTTTGTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGAGGCAGTCTCATTCATaGTATCATACTTACACACAA +
Preference number: 5 (lower is better)
Translates to: QKFVLIGTSAKFHFNWCRRQSHS*YHTYTQ
Trigger: TTGTGTGTAAGTATGATACAATGAATGAGACTGCCT...CCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp GTGCTCATAGGCACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCCTGATTCTTTATGTTTaGTATGGAGCGGCACTTTTA +
Preference number: 5 (lower is better)
Translates to: VLIGTSAKFHFNWCRTNILILYV*YGAALL
Trigger: TAAAAGTGCCGCTCCATACAAAACATAAAGAATCAG...GATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp TGCAGGCAGTTTGCACAATACCTAATTAACCTTCCTATTGAAAATACCAAATGTTCCCATTTAGGGTGGTaGGAGGGCCTTTTTAATTTA +
Preference number: 5 (lower is better)
Translates to: CRQFAQYLINLPIENTKCSHLGW*EGLFNL
Trigger: TAAATTAAAAAGGCCCTCCAACCACCCTAAATGGGA...ACATTTGGTATTTTCAATAGGAAGGTTAATTAGGTATTGTGCAAACTGCCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp TCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGATCACTGCTCATGTACTaGCATGTTTGGGACTCAAAT +
Preference number: 5 (lower is better)
Translates to: SAKFHFNWCRTNIGEKMRSLLMY*HVWDSN
Trigger: ATTTGAGTCCCAAACATGCAAGTACATGAGCAGTGA...TCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp TCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGATGTCTTGGGCAGGAGTaGTTGAAAATAGGTTATTGG +
Preference number: 5 (lower is better)
Translates to: SAKFHFNWCRTNIGEKMRCLGQE*LKIGYW
Trigger: CCAATAACCTATTTTCAACAACTCCTGCCCAAGACA...TCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp TCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGAGATCTCACTGGTACTGTTaGGAATTTGTGAAACCTCTT +
Preference number: 5 (lower is better)
Translates to: SAKFHFNWCRTNIGEKMRSHWYC*EFVKPL
Trigger: AAGAGGTTTCACAAATTCCAAACAGTACCAGTGAGA...TCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS-3UTR CAA 90 bp ACATCTGCAAAATTTCACTTCAATTGGTGTAGGACTAATATCGGTGAGAAAATGTACGTGTCTTTGCATTaGAGAGGCACTGTTAAAAAT +
Preference number: 5 (lower is better)
Translates to: TSAKFHFNWCRTNIGEKMYVSLH*RGTVKN
Trigger: ATTTTTAACAGTGCCTCTCAAATGCAAAGACACGTA...CATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000248444.10
CDS CAA 90 bp GGCTCCACCACCGTGTCGGGCACGGCCGCCTTCAGCTCCCTGCGCTaGCCCAGCACGTGGTTCATCACCTCCATCAGCTTCGGGGATGCC +
Preference number: 6 (lower is better)
Translates to: GSTTVSGTAAFSSLR*PSTWFITSISFGDA
Trigger: GGCATCCCCGAAGCTGATGGAGGTGATGAACCACGTGCTGGGCAAGCGCAGGGAGCTGAAGGCGGCCGTGCCCGACACGGTGGTGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000440053.1
CDS GCA 72 bp CCGTGTCGGGCACGGCCGCCTTCAGCTCCCTGCGCTTaGCCAGCACGTGGTTCATCACCTCCATCAGCTTCG +
Preference number: 6 (lower is better)
Translates to: PCRARPPSAPCA*PARGSSPPSAS
Trigger: CGAAGCTGATGGAGGTGATGAACCACGTGCTGGGCAAGCGCAGGGAGCTGAAGGCGGCCGTGCCCGACACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000440053.1
CDS GCA 72 bp CCACCACCGTGTCGGGCACGGCCGCCTTCAGCTCCCTaGGCTTGCCCAGCACGTGGTTCATCACCTCCATCA +
Preference number: 6 (lower is better)
Translates to: PPPCRARPPSAP*ACPARGSSPPS
Trigger: TGATGGAGGTGATGAACCACGTGCTGGGCAAGCGCAGGGAGCTGAAGGCGGCCGTGCCCGACACGGTGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000440053.1
CDS GCA 72 bp CCTGGCCCTCACCCACGGAGCCCACAGTGTGGGTTTTaGCTAGGCCTGAGGTCCGGTTGGACGCTGTCCACT +
Preference number: 6 (lower is better)
Translates to: PGPHPRSPQCGF*LGLRSGWTLST
Trigger: AGTGGACAGCGTCCAACCGGACCTCAGGCCTAGGCAAAACCCACACTGTGGGCTCCGTGGGTGAGGGCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440053.1
CDS CCA 72 bp TGGCCCGCGCTGGGACCTCAAAGGCCTTGGTGTTGTTaGCGCCAGTTCCCTGGACCTGGAACAGCCGTGTGG +
Preference number: 6 (lower is better)
Translates to: WPALGPQRPWCC*RQFPGPGTAVW
Trigger: CCACACGGCTGTTCCAGGTCCAGGGAACTGGCGCCAACAACACCAAGGCCTTTGAGGTCCCAGCGCGGGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS CAA 72 bp ACCGTGTCGGGCACGGCCGCCTTCAGCTCCCTGCGCTaGCCCAGCACGTGGTTCATCACCTCCATCAGCTTC +
Preference number: 6 (lower is better)
Translates to: TVSGTAAFSSLR*PSTWFITSISF
Trigger: GAAGCTGATGGAGGTGATGAACCACGTGCTGGGCAAGCGCAGGGAGCTGAAGGCGGCCGTGCCCGACACGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000440053.1
CDS CCA 72 bp ACCTCAAAGGCCTTGGTGTTGTTGGCGCCAGTTCCCTaGACCTGGAACAGCCGTGTGGAGGGCCCGGTCTCC +
Preference number: 6 (lower is better)
Translates to: TSKALVLLAPVP*TWNSRVEGPVS
Trigger: GGAGACCGGGCCCTCCACACGGCTGTTCCAGGTCCAGGGAACTGGCGCCAACAACACCAAGGCCTTTGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS CAA 72 bp TTGGCCCGCGCTGGGACCTCAAAGGCCTTGGTGTTGTaGGCGCCAGTTCCCTGGACCTGGAACAGCCGTGTG +
Preference number: 6 (lower is better)
Translates to: LARAGTSKALVL*APVPWTWNSRV
Trigger: CACACGGCTGTTCCAGGTCCAGGGAACTGGCGCCAACAACACCAAGGCCTTTGAGGTCCCAGCGCGGGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS CAA 90 bp TTGAGGAAATTGGCCCGCGCTGGGACCTCAAAGGCCTTGGTGTTGTaGGCGCCAGTTCCCTGGACCTGGAACAGCCGTGTGGAGGGCCCG +
Preference number: 6 (lower is better)
Translates to: LRKLARAGTSKALVL*APVPWTWNSRVEGP
Trigger: CGGGCCCTCCACACGGCTGTTCCAGGTCCAGGGAACTGGCGCCAACAACACCAAGGCCTTTGAGGTCCCAGCGCGGGCCAATTTCCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS CAA 90 bp AGATTCCCCTCGGAGTCAGACACATGGTACAGTTTGAGTGCAGCCTaGAGTGCCGGCTCCACCACCGTGTCGGGCACGGCCGCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: RFPSESDTWYSLSAA*SAGSTTVSGTAAFS
Trigger: GCTGAAGGCGGCCGTGCCCGACACGGTGGTGGAGCCGGCACTCAAGGCTGCACTCAAACTGTACCATGTGTCTGACTCCGAGGGGAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000440053.1
CDS TCA 72 bp TGGGGGTCTCAGGGTCACGCCCGCTGGGATGGGTCTTaGGGTATTCCTGTGCAGTGGTTGCTGCGGCCTTCT +
Preference number: 6 (lower is better)
Translates to: WGSQGHARWDGS*GIPVQWLLRPS
Trigger: AGAAGGCCGCAGCAACCACTGCACAGGAATACCTCAAGACCCATCCCAGCGGGCGTGACCCTGAGACCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS CCA 72 bp AAGGCCTTGGTGTTGTTGGCGCCAGTTCCCTGGACCTaGAACAGCCGTGTGGAGGGCCCGGTCTCCAAGTTG +
Preference number: 6 (lower is better)
Translates to: KALVLLAPVPWT*NSRVEGPVSKL
Trigger: CAACTTGGAGACCGGGCCCTCCACACGGCTGTTCCAGGTCCAGGGAACTGGCGCCAACAACACCAAGGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS CCA 72 bp GCTTCTCCGTCCGGGAGATGGTGTCAGCAACCATCTTaGCCATCTCCCGCTCGTCCCCGCTACAACCCTTCC +
Preference number: 6 (lower is better)
Translates to: ASPSGRWCQQPS*PSPARPRYNPS
Trigger: GGAAGGGTTGTAGCGGGGACGAGCGGGAGATGGCCAAGATGGTTGCTGACACCATCTCCCGGACGGAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS CAA 72 bp TCGGAGTCAGACACATGGTACAGTTTGAGTGCAGCCTaGAGTGCCGGCTCCACCACCGTGTCGGGCACGGCC +
Preference number: 6 (lower is better)
Translates to: SESDTWYSLSAA*SAGSTTVSGTA
Trigger: GGCCGTGCCCGACACGGTGGTGGAGCCGGCACTCAAGGCTGCACTCAAACTGTACCATGTGTCTGACTCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000440053.1
CDS CAA 72 bp ATGGGGGTCTCAGGGTCACGCCCGCTGGGATGGGTCTaGAGGTATTCCTGTGCAGTGGTTGCTGCGGCCTTC +
Preference number: 6 (lower is better)
Translates to: MGVSGSRPLGWV*RYSCAVVAAAF
Trigger: GAAGGCCGCAGCAACCACTGCACAGGAATACCTCAAGACCCATCCCAGCGGGCGTGACCCTGAGACCCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS CAA 90 bp GAATTGAGGAAATTGGCCCGCGCTGGGACCTCAAAGGCCTTGGTGTaGTTGGCGCCAGTTCCCTGGACCTGGAACAGCCGTGTGGAGGGC +
Preference number: 6 (lower is better)
Translates to: ELRKLARAGTSKALV*LAPVPWTWNSRVEG
Trigger: GCCCTCCACACGGCTGTTCCAGGTCCAGGGAACTGGCGCCAACAACACCAAGGCCTTTGAGGTCCCAGCGCGGGCCAATTTCCTCAATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS TCA 72 bp AAGCCACGCCCCCTTTCCGGATCACAAGGCCTTGCTTaGAGTAGCCTCGGAAGGCCTCGCTCTCGTTGCCCT +
Preference number: 6 (lower is better)
Translates to: KPRPLSGSQGLA*SSLGRPRSRCP
Trigger: AGGGCAACGAGAGCGAGGCCTTCCGAGGCTACTTCAAGCAAGGCCTTGTGATCCGGAAAGGGGGCGTGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000440053.1
CDS GCA 72 bp CCAATTCATTCTCTCCGTCCACCACGCCTACATAGGTaGGCCCTCCCCGCTCCTGGTCTCGGATCTCCTTGG +
Preference number: 6 (lower is better)
Translates to: PIHSLRPPRLHR*ALPAPGLGSPW
Trigger: CCAAGGAGATCCGAGACCAGGAGCGGGGAGGGCGCACCTATGTAGGCGTGGTGGACGGAGAGAATGAATTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000440053.1
CDS GCA 72 bp GTTCCACTTTGGCCACGGAGCCCACAGTGTGGGTTTTaGCTAGGCCTGAGGTCCGGTTGGACGCTGTCCACT +
Preference number: 6 (lower is better)
Translates to: VPLWPRSPQCGF*LGLRSGWTLST
Trigger: AGTGGACAGCGTCCAACCGGACCTCAGGCCTAGGCAAAACCCACACTGTGGGCTCCGTGGCCAAAGTGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS CAA 72 bp TGTTCCACTTTGGCCACGGAGCCCACAGTGTGGGTTTaGCCTAGGCCTGAGGTCCGGTTGGACGCTGTCCAC +
Preference number: 6 (lower is better)
Translates to: CSTLATEPTVWV*PRPEVRLDAVH
Trigger: GTGGACAGCGTCCAACCGGACCTCAGGCCTAGGCAAAACCCACACTGTGGGCTCCGTGGCCAAAGTGGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS CAA 72 bp AAATTGGCCCGCGCTGGGACCTCAAAGGCCTTGGTGTaGTTGGCGCCAGTTCCCTGGACCTGGAACAGCCGT +
Preference number: 6 (lower is better)
Translates to: KLARAGTSKALV*LAPVPWTWNSR
Trigger: ACGGCTGTTCCAGGTCCAGGGAACTGGCGCCAACAACACCAAGGCCTTTGAGGTCCCAGCGCGGGCCAATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS CAA 72 bp TGCTTCTCCGTCCGGGAGATGGTGTCAGCAACCATCTaGGCCATCTCCCGCTCGTCCCCGCTACAACCCTTC +
Preference number: 6 (lower is better)
Translates to: CFSVREMVSATI*AISRSSPLQPF
Trigger: GAAGGGTTGTAGCGGGGACGAGCGGGAGATGGCCAAGATGGTTGCTGACACCATCTCCCGGACGGAGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS CAA 90 bp ACCACCACTTGCTTCTCCGTCCGGGAGATGGTGTCAGCAACCATCTaGGCCATCTCCCGCTCGTCCCCGCTACAACCCTTCCCACACCAT +
Preference number: 6 (lower is better)
Translates to: TTTCFSVREMVSATI*AISRSSPLQPFPHH
Trigger: ATGGTGTGGGAAGGGTTGTAGCGGGGACGAGCGGGAGATGGCCAAGATGGTTGCTGACACCATCTCCCGGACGGAGAAGCAAGTGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS GCA 72 bp ATTCCCCTCGGAGTCAGACACATGGTACAGTTTGAGTaGAGCCTTGAGTGCCGGCTCCACCACCGTGTCGGG +
Preference number: 6 (lower is better)
Translates to: IPLGVRHMVQFE*SLECRLHHRVG
Trigger: CCCGACACGGTGGTGGAGCCGGCACTCAAGGCTGCACTCAAACTGTACCATGTGTCTGACTCCGAGGGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000440053.1
CDS CCA 72 bp AGCCCCGGGGTGGTGATGTTGAGAGAGCCTTTGACTTaGGCGCTCAGCTTGGTCATGGTGAGTGAGCCTGTC +
Preference number: 6 (lower is better)
Translates to: SPGVVMLREPLT*ALSLVMVSEPV
Trigger: GACAGGCTCACTCACCATGACCAAGCTGAGCGCCCAAGTCAAAGGCTCTCTCAACATCACCACCCCGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000454069.5
CDS CCA 72 bp GTAACAGTCCTCGTGACTGAGCAGGTCCTGTGTCAGTaGCCGTGTGGCGACTTCCCTCACCACCAGATTCCC +
Preference number: 6 (lower is better)
Translates to: VTVLVTEQVLCQ*PCGDFPHHQIP
Trigger: GGGAATCTGGTGGTGAGGGAAGTCGCCACACGGCCACTGACACAGGACCTGCTCAGTCACGAGGACTGTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000440053.1
CDS CCA 72 bp TTCACCTGTTCCACTTTGGCCACGGAGCCCACAGTGTaGGTTTTGCCTAGGCCTGAGGTCCGGTTGGACGCT +
Preference number: 6 (lower is better)
Translates to: FTCSTLATEPTV*VLPRPEVRLDA
Trigger: AGCGTCCAACCGGACCTCAGGCCTAGGCAAAACCCACACTGTGGGCTCCGTGGCCAAAGTGGAACAGGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS CCA 72 bp ACAATGATGGGGGTCTCAGGGTCACGCCCGCTGGGATaGGTCTTGAGGTATTCCTGTGCAGTGGTTGCTGCG +
Preference number: 6 (lower is better)
Translates to: TMMGVSGSRPLG*VLRYSCAVVAA
Trigger: CGCAGCAACCACTGCACAGGAATACCTCAAGACCCATCCCAGCGGGCGTGACCCTGAGACCCCCATCATTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS CCA 72 bp AAGTCTTCGTTGAAGATGCACGTCAGGGAAGGAGGGTaGGTGGTGGACCAAGTGGCTCTCCTGGCCCAGCTC +
Preference number: 6 (lower is better)
Translates to: KSSLKMHVREGG*VVDQVALLAQL
Trigger: GAGCTGGGCCAGGAGAGCCACTTGGTCCACCACCCACCCTCCTTCCCTGACGTGCATCTTCAACGAAGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440053.1
CDS CAA 72 bp TTGAGGAAATTGGCCCGCGCTGGGACCTCAAAGGCCTaGGTGTTGTTGGCGCCAGTTCCCTGGACCTGGAAC +
Preference number: 6 (lower is better)
Translates to: LRKLARAGTSKA*VLLAPVPWTWN
Trigger: GTTCCAGGTCCAGGGAACTGGCGCCAACAACACCAAGGCCTTTGAGGTCCCAGCGCGGGCCAATTTCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS CAA 90 bp TGCATGGCCTCGATCCTCCATATCTGCAGCCCCGGGGTGGTGATGTaGAGAGAGCCTTTGACTTGGGCGCTCAGCTTGGTCATGGTGAGT +
Preference number: 6 (lower is better)
Translates to: CMASILHICSPGVVM*REPLTWALSLVMVS
Trigger: ACTCACCATGACCAAGCTGAGCGCCCAAGTCAAAGGCTCTCTCAACATCACCACCCCGGGGCTGCAGATATGGAGGATCGAGGCCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000440053.1
ENST00000454069.5
CDS CAA 90 bp AACTTCACCTGTTCCACTTTGGCCACGGAGCCCACAGTGTGGGTTTaGCCTAGGCCTGAGGTCCGGTTGGACGCTGTCCACTTCTGGAAG +
Preference number: 6 (lower is better)
Translates to: NFTCSTLATEPTVWV*PRPEVRLDAVHFWK
Trigger: CTTCCAGAAGTGGACAGCGTCCAACCGGACCTCAGGCCTAGGCAAAACCCACACTGTGGGCTCCGTGGCCAAAGTGGAACAGGTGAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS CAA 90 bp TCATTGGAATTGAGGAAATTGGCCCGCGCTGGGACCTCAAAGGCCTaGGTGTTGTTGGCGCCAGTTCCCTGGACCTGGAACAGCCGTGTG +
Preference number: 6 (lower is better)
Translates to: SLELRKLARAGTSKA*VLLAPVPWTWNSRV
Trigger: CACACGGCTGTTCCAGGTCCAGGGAACTGGCGCCAACAACACCAAGGCCTTTGAGGTCCCAGCGCGGGCCAATTTCCTCAATTCCAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS TCA 72 bp GCCAAACGTAGAGCAGGTAATGCTGCTTCTCGCCGATaGGGTAGGTGTAGAGCAGCAGGTAGCAGTCGCCCC +
Preference number: 6 (lower is better)
Translates to: AKRRAGNAASRR*GRCRAAGSSRP
Trigger: GGGGCGACTGCTACCTGCTGCTCTACACCTACCTCATCGGCGAGAAGCAGCATTACCTGCTCTACGTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS GCA 72 bp ACAGGCACCATCTGCATGGCCTCGATCCTCCATATCTaGAGCCCCGGGGTGGTGATGTTGAGAGAGCCTTTG +
Preference number: 6 (lower is better)
Translates to: TGTICMASILHI*SPGVVMLREPL
Trigger: CAAAGGCTCTCTCAACATCACCACCCCGGGGCTGCAGATATGGAGGATCGAGGCCATGCAGATGGTGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000440053.1
ENST00000454069.5
CDS CCA 72 bp GGCCCTTCAGGAAGTCATCCATCTGTGTGGTGTAGATaGCAGCTGCCCCCTGCTCATCCAGGGATGAGTCCT +
Preference number: 6 (lower is better)
Translates to: GPSGSHPSVWCR*QLPPAHPGMSP
Trigger: AGGACTCATCCCTGGATGAGCAGGGGGCAGCTGCCATCTACACCACACAGATGGATGACTTCCTGAAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000440053.1
ENST00000454069.5
CDS CCA 72 bp AGGTGGCTCCTTGCCCATTGGGACCCGGATCTGGACTaGTTCACCATTGTACTTCTGGTCCAGGATGACGGC +
Preference number: 6 (lower is better)
Translates to: RWLLAHWDPDLD*FTIVLLVQDDG
Trigger: GCCGTCATCCTGGACCAGAAGTACAATGGTGAACCAGTCCAGATCCGGGTCCCAATGGGCAAGGAGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS CAA 72 bp ATCTGCAGCCCCGGGGTGGTGATGTTGAGAGAGCCTTaGACTTGGGCGCTCAGCTTGGTCATGGTGAGTGAG +
Preference number: 6 (lower is better)
Translates to: ICSPGVVMLREP*TWALSLVMVSE
Trigger: CTCACTCACCATGACCAAGCTGAGCGCCCAAGTCAAAGGCTCTCTCAACATCACCACCCCGGGGCTGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000440053.1
ENST00000454069.5
CDS CAA 90 bp ATCCTCCATATCTGCAGCCCCGGGGTGGTGATGTTGAGAGAGCCTTaGACTTGGGCGCTCAGCTTGGTCATGGTGAGTGAGCCTGTCTTG +
Preference number: 6 (lower is better)
Translates to: ILHICSPGVVMLREP*TWALSLVMVSEPVL
Trigger: CAAGACAGGCTCACTCACCATGACCAAGCTGAGCGCCCAAGTCAAAGGCTCTCTCAACATCACCACCCCGGGGCTGCAGATATGGAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000454069.5
CDS CCA 72 bp CACCATGCGTCCCTTGAAGATGGACATAAGATGAGGTaGCTCCTTGCCCATTGGGACCCGGATCTGGACTGG +
Preference number: 6 (lower is better)
Translates to: HHASLEDGHKMR*LLAHWDPDLDW
Trigger: CCAGTCCAGATCCGGGTCCCAATGGGCAAGGAGCCACCTCATCTTATGTCCATCTTCAAGGGACGCATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS CCA 72 bp GTCAGACACATGGTACAGTTTGAGTGCAGCCTGTCTTaGGGAGGCAGCTGCCACCTGGGAGATCTCAGGGAA +
Preference number: 6 (lower is better)
Translates to: VRHMVQFECSLS*GGSCHLGDLRE
Trigger: TTCCCTGAGATCTCCCAGGTGGCAGCTGCCTCCCCAAGACAGGCTGCACTCAAACTGTACCATGTGTCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392114.6
CDS CAA 72 bp GTGATGTTGAGAGAGCCTTTGACTTGGGCGCTCAGCTaGGTCATGGTGAGTGAGCCTGTCTTGGGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: VMLREPLTWALS*VMVSEPVLGRQ
Trigger: CTGCCTCCCCAAGACAGGCTCACTCACCATGACCAAGCTGAGCGCCCAAGTCAAAGGCTCTCTCAACATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000454069.5
CDS GCA 72 bp GCTGGGATGGGTCTTGAGGTATTCCTGTGCAGTGGTTaGTGCGGCCTTCTTCTCCTCCTCGTTGGCATGTTT +
Preference number: 6 (lower is better)
Translates to: AGMGLEVFLCSG*CGLLLLLVGMF
Trigger: AAACATGCCAACGAGGAGGAGAAGAAGGCCGCAGCAACCACTGCACAGGAATACCTCAAGACCCATCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS TCA 72 bp CTCCCATCATCTACCATCTTCTGCTGGGCAGCCACCTaGGGCTTGACATGCATGGATGTGGCATCGAACTTC +
Preference number: 6 (lower is better)
Translates to: LPSSTIFCWAAT*GLTCMDVASNF
Trigger: GAAGTTCGATGCCACATCCATGCATGTCAAGCCTCAGGTGGCTGCCCAGCAGAAGATGGTAGATGATGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS GCA 72 bp CAGCACGTGGTTCATCACCTCCATCAGCTTCGGGGATaGCAATTCATTCTCTCCGTCCACCACGCCTACATA +
Preference number: 6 (lower is better)
Translates to: QHVVHHLHQLRG*QFILSVHHAYI
Trigger: TATGTAGGCGTGGTGGACGGAGAGAATGAATTGGCATCCCCGAAGCTGATGGAGGTGATGAACCACGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000440053.1
CDS CAA 72 bp ATGGGCAGAGGCCCAGAACTGAGGTTGCTGTTAGCATaGAACACGTCCACTTTGGGGCTTGTGACCTCAGCA +
Preference number: 6 (lower is better)
Translates to: MGRGPELRLLLA*NTSTLGLVTSA
Trigger: TGCTGAGGTCACAAGCCCCAAAGTGGACGTGTTCAATGCTAACAGCAACCTCAGTTCTGGGCCTCTGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS TCA 72 bp CATCTACCATCTTCTGCTGGGCAGCCACCTGAGGCTTaGCATGCATGGATGTGGCATCGAACTTCACCTGTT +
Preference number: 6 (lower is better)
Translates to: HLPSSAGQPPEA*HAWMWHRTSPV
Trigger: AACAGGTGAAGTTCGATGCCACATCCATGCATGTCAAGCCTCAGGTGGCTGCCCAGCAGAAGATGGTAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS TCA 72 bp CAGAGAAGGCAGCTGGAGTCATCCCAAAGGCCTGAGTaGAATCTTCAATGGACAGGTGTTCCTCCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: QRRQLESSQRPE*NLQWTGVPPSC
Trigger: GCAGGAAGGAGGAACACCTGTCCATTGAAGATTTCACTCAGGCCTTTGGGATGACTCCAGCTGCCTTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6
CDS CCA 72 bp AAAGACATCATTGGAATTGAGGAAATTGGCCCGCGCTaGGACCTCAAAGGCCTTGGTGTTGTTGGCGCCAGT +
Preference number: 6 (lower is better)
Translates to: KDIIGIEEIGPR*DLKGLGVVGAS
Trigger: ACTGGCGCCAACAACACCAAGGCCTTTGAGGTCCCAGCGCGGGCCAATTTCCTCAATTCCAATGATGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS CAA 72 bp CAAGACTGGGTCTTGAGGACAAAGACATCATTGGAATaGAGGAAATTGGCCCGCGCTGGGACCTCAAAGGCC +
Preference number: 6 (lower is better)
Translates to: QDWVLRTKTSLE*RKLARAGTSKA
Trigger: GGCCTTTGAGGTCCCAGCGCGGGCCAATTTCCTCAATTCCAATGATGTCTTTGTCCTCAAGACCCAGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS CCA 72 bp GAAGATGGACATAAGATGAGGTGGCTCCTTGCCCATTaGGACCCGGATCTGGACTGGTTCACCATTGTACTT +
Preference number: 6 (lower is better)
Translates to: EDGHKMRWLLAH*DPDLDWFTIVL
Trigger: AAGTACAATGGTGAACCAGTCCAGATCCGGGTCCCAATGGGCAAGGAGCCACCTCATCTTATGTCCATCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248444.10
ENST00000392114.6
ENST00000419986.1
CDS TCA 72 bp TCTAGTAGGAACACATCATCCTCTTCCAAGTCATCCTaGTTGAAGTCAGGGATCTCTGTGGCCAGGAAGCGC +
Preference number: 6 (lower is better)
Translates to: SSRNTSSSSKSS*LKSGISVARKR
Trigger: GCGCTTCCTGGCCACAGAGATCCCTGACTTCAATCAGGATGACTTGGAAGAGGATGATGTGTTCCTACTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248444.10
ENST00000392114.6