Pregenerated sensors for VHL (Homo sapiens)
Ensembl gene IDs: ENSG00000134086Ensembl transcript IDs: ENST00000256474.3, ENST00000345392.2, ENST00000477538.1
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CACTGGGGTCTCAAAGAGGAGAAAGACTTGTCCCTGCCTCACGGATaGCTCAGTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGC | + |
Preference number: 1 (lower is better) Translates to: HWGLKEEKDLSLPHG*LSLPKAGGRQVTNR Trigger: GCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGACTGAGGCATCCGTGAGGCAGGGACAAGTCTTTCTCCTCTTTGAGACCCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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3UTR TCA 90 bp | CACTTTCTAACAAAGTGTCCCCTGGTTTGTTCCTCTGACAAACCCTaGCTGAAGGCTCATGATGTGCAGGCACTGGGGTCTCAAAGAGGA | + |
Preference number: 1 (lower is better) Translates to: HFLTKCPLVCSSDKP*LKAHDVQALGSQRG Trigger: TCCTCTTTGAGACCCCAGTGCCTGCACATCATGAGCCTTCAGTCAGGGTTTGTCAGAGGAACAAACCAGGGGACACTTTGTTAGAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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3UTR CCA 90 bp | CCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATaGATGTATTATACATCCATTAAAAGCAGATGCCAATGCCTTCTT | + |
Preference number: 1 (lower is better) Translates to: PKQEADKSPTATDVE*MYYTSIKSRCQCLL Trigger: AAGAAGGCATTGGCATCTGCTTTTAATGGATGTATAATACATCCATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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3UTR CAA 90 bp | AGGCTCATGATGTGCAGGCACTGGGGTCTCAAAGAGGAGAAAGACTaGTCCCTGCCTCACGGATGCCTCAGTCTTCCCAAAGCAGGAGGC | + |
Preference number: 2 (lower is better) Translates to: RLMMCRHWGLKEEKD*SLPHGCLSLPKAGG Trigger: GCCTCCTGCTTTGGGAAGACTGAGGCATCCGTGAGGCAGGGACAAGTCTTTCTCCTCTTTGAGACCCCAGTGCCTGCACATCATGAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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3UTR-3UTR TCA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTCTGACTGAAGGCTCATaGTGTGCAGGCACTGGGGTC | + |
Preference number: 2 (lower is better) Translates to: SRIFCADGKLQKCYYHNCLTEGS*CAGTGV Trigger: GACCCCAGTGCCTGCACATCATGAGCCTTCAGTCAG...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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3UTR-3UTR CCA 90 bp | AGTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGCTTTCTTTTAAGCAATaGTGCCTATTTTACTCTGAG | + |
Preference number: 2 (lower is better) Translates to: SLPKAGGRQVTNRYGCRMLSFKQ*CLFYSE Trigger: CTCAGAGTAAAATAGGCACCATTGCTTAAAAGAAAG...CATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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3UTR-3UTR CCA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTGCACTTCAACAAGAGTaGACCGAGAAAGTGCACGAC | + |
Preference number: 2 (lower is better) Translates to: SRIFCADGKLQKCYYHNCALQQE*TEKVHD Trigger: GTCGTGCACTTTCTCGGTCCACTCTTGTTGAAGTGC...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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3UTR-3UTR TCA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTTGCTGCAATTCCCACTaGATTACTTATACAAACCTC | + |
Preference number: 2 (lower is better) Translates to: SRIFCADGKLQKCYYHNCCCNSH*ITYTNL Trigger: GAGGTTTGTATAAGTAATTCAGTGGGAATTGCAGCA...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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3UTR-3UTR CCA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTCTTTCTTTTAAGCAATaGTGCCTATTTTACTCTGAG | + |
Preference number: 2 (lower is better) Translates to: SRIFCADGKLQKCYYHNCLSFKQ*CLFYSE Trigger: CTCAGAGTAAAATAGGCACCATTGCTTAAAAGAAAG...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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3UTR GCA 72 bp | GGCACTGGGGTCTCAAAGAGGAGAAAGACTTGTCCCTaGCTCACGGATGCCTCAGTCTTCCCAAAGCAGGAG | + |
Preference number: 3 (lower is better) Translates to: GTGVSKRRKTCP*LTDASVFPKQE Trigger: CTCCTGCTTTGGGAAGACTGAGGCATCCGTGAGGCAGGGACAAGTCTTTCTCCTCTTTGAGACCCCAGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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3UTR TCA 72 bp | GGCGGGAGCCACCATGCCAGCCGTCACTCTCATTTTTaGGCACAGGAATTGTGCCCAAAGGCTAGGATAAGG | + |
Preference number: 3 (lower is better) Translates to: GGSHHASRHSHF*AQELCPKARIR Trigger: CCTTATCCTAGCCTTTGGGCACAATTCCTGTGCTCAAAAATGAGAGTGACGGCTGGCATGGTGGCTCCCGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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3UTR CCA 72 bp | AGGCTACTCCATGAATCCATTGGTAGGACCAGAGGCTaGAGGTGGAAGTGCCACCTGGTCCTGCCTGATAAA | + |
Preference number: 3 (lower is better) Translates to: RLLHESIGRTRG*RWKCHLVLPDK Trigger: TTTATCAGGCAGGACCAGGTGGCACTTCCACCTCCAGCCTCTGGTCCTACCAATGGATTCATGGAGTAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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3UTR TCA 72 bp | ACAAAGTGTCCCCTGGTTTGTTCCTCTGACAAACCCTaGCTGAAGGCTCATGATGTGCAGGCACTGGGGTCT | + |
Preference number: 3 (lower is better) Translates to: TKCPLVCSSDKP*LKAHDVQALGS Trigger: AGACCCCAGTGCCTGCACATCATGAGCCTTCAGTCAGGGTTTGTCAGAGGAACAAACCAGGGGACACTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR GCA 90 bp | GTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGGGGATGCGGCGGCCCGTaGCAGGCGGCAGCGTTGGGT | + |
Preference number: 4 (lower is better) Translates to: VFPKQEADKSPTATDVEWGCGGP*QAAALG Trigger: ACCCAACGCTGCCGCCTGGCACGGGCCGCCGCATCC...CCATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CCA 90 bp | GTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGGGCCAGGCGGCAGCGTTaGGTAGGGCTGCGGCTCGCC | + |
Preference number: 4 (lower is better) Translates to: VFPKQEADKSPTATDVEWARRQR*VGLRLA Trigger: GGCGAGCCGCAGCCCTACCCAACGCTGCCGCCTGGC...CCATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR GCA 90 bp | AGTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGCTCGGTAGCTGTGGATaGGGCGGCCCGTGCCAGGCG | + |
Preference number: 4 (lower is better) Translates to: SLPKAGGRQVTNRYGCRMLGSCG*GGPCQA Trigger: CGCCTGGCACGGGCCGCCGCATCCACAGCTACCGAG...CATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR GCA 90 bp | AGTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGGGCTGGAGGTGGAAGTaGCACCTGGTCCTGCCTGAT | + |
Preference number: 4 (lower is better) Translates to: SLPKAGGRQVTNRYGCRMGWRWK*HLVLPD Trigger: ATCAGGCAGGACCAGGTGGCACTTCCACCTCCAGCC...CATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CCA 90 bp | GCAAAAATGCCACCACCTTCTCCTGATAAATACTTCTCTAATGGGCAGGCATTAGCCAGGCGGCAGCGTTaGGTAGGGCTGCGGCTCGCC | + |
Preference number: 4 (lower is better) Translates to: AKMPPPSPDKYFSNGQALARRQR*VGLRLA Trigger: GGCGAGCCGCAGCCCTACCCAACGCTGCCGCCTGGC...TAATGCCTGCCCATTAGAGAAGTATTTATCAGGAGAAGGTGGTGGCATTTTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR TCA 90 bp | AGTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGCTGACTGAAGGCTCATaGTGTGCAGGCACTGGGGTC | + |
Preference number: 4 (lower is better) Translates to: SLPKAGGRQVTNRYGCRMLTEGS*CAGTGV Trigger: GACCCCAGTGCCTGCACATCATGAGCCTTCAGTCAG...CATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR GCA 90 bp | GTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGGTCCGTTGATGTGCAATaGGCTCCTGTGTCAGCCGCT | + |
Preference number: 4 (lower is better) Translates to: VFPKQEADKSPTATDVEWSVDVQ*APVSAA Trigger: AGCGGCTGACACAGGAGCGCATTGCACATCAACGGA...CCATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CCA 90 bp | GTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGGAGGCTCCGGACAACCTaGAGGCATCGCTCTTTCAGA | + |
Preference number: 4 (lower is better) Translates to: VFPKQEADKSPTATDVEWRLRTT*RHRSFR Trigger: TCTGAAAGAGCGATGCCTCCAGGTTGTCCGGAGCCT...CCATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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3UTR CAA 72 bp | ATGTGCAGGCACTGGGGTCTCAAAGAGGAGAAAGACTaGTCCCTGCCTCACGGATGCCTCAGTCTTCCCAAA | + |
Preference number: 4 (lower is better) Translates to: MCRHWGLKEEKD*SLPHGCLSLPK Trigger: TTTGGGAAGACTGAGGCATCCGTGAGGCAGGGACAAGTCTTTCTCCTCTTTGAGACCCCAGTGCCTGCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR TCA 90 bp | GTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGGCAATCTCCCATCCGTTaGTGTGCAATGCGCTCCTGT | + |
Preference number: 4 (lower is better) Translates to: VFPKQEADKSPTATDVEWQSPIR*CAMRSC Trigger: ACAGGAGCGCATTGCACATCAACGGATGGGAGATTG...CCATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR GCA 90 bp | GTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGGTCCCATCCGTTGATGTaGAATGCGCTCCTGTGTCAG | + |
Preference number: 4 (lower is better) Translates to: VFPKQEADKSPTATDVEWSHPLM*NALLCQ Trigger: CTGACACAGGAGCGCATTGCACATCAACGGATGGGA...CCATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR TCA 90 bp | AGTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGCTGACAAACCCTGACTaGAGGCTCATGATGTGCAGG | + |
Preference number: 4 (lower is better) Translates to: SLPKAGGRQVTNRYGCRMLTNPD*RLMMCR Trigger: CCTGCACATCATGAGCCTTCAGTCAGGGTTTGTCAG...CATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR GCA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTGGATGCGGCGGCCCGTaGCAGGCGGCAGCGTTGGGT | + |
Preference number: 4 (lower is better) Translates to: SRIFCADGKLQKCYYHNCGCGGP*QAAALG Trigger: ACCCAACGCTGCCGCCTGGCACGGGCCGCCGCATCC...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR GCA 90 bp | AGTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGTCCCATCCGTTGATGTaGAATGCGCTCCTGTGTCAG | + |
Preference number: 4 (lower is better) Translates to: SLPKAGGRQVTNRYGCRMSHPLM*NALLCQ Trigger: CTGACACAGGAGCGCATTGCACATCAACGGATGGGA...CATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR GCA 90 bp | AGTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGGCGATATCAGCTCACTaGAATCTTCGCCTCCTGGGT | + |
Preference number: 4 (lower is better) Translates to: SLPKAGGRQVTNRYGCRMAISAH*NLRLLG Trigger: ACCCAGGAGGCGAAGATTGCAGTGAGCTGATATCGC...CATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256474.3 |
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CDS-3UTR CCA 90 bp | GTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGGGCACTTCAACAAGAGTaGACCGAGAAAGTGCACGAC | + |
Preference number: 4 (lower is better) Translates to: VFPKQEADKSPTATDVEWALQQE*TEKVHD Trigger: GTCGTGCACTTTCTCGGTCCACTCTTGTTGAAGTGC...CCATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR TCA 90 bp | GCAAAAATGCCACCACCTTCTCCTGATAAATACTTCTCTAATGGGCAGGCATTAGCTCGCCGTCGAAGTTaGGCCATACGGGCAGCACGA | + |
Preference number: 4 (lower is better) Translates to: AKMPPPSPDKYFSNGQALARRRS*AIRAAR Trigger: TCGTGCTGCCCGTATGGCTCAACTTCGACGGCGAGC...TAATGCCTGCCCATTAGAGAAGTATTTATCAGGAGAAGGTGGTGGCATTTTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR TCA 90 bp | AGTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGTGTAATTCTCAGGCTTaGCTAGGCTCCGGACAACCT | + |
Preference number: 4 (lower is better) Translates to: SLPKAGGRQVTNRYGCRMCNSQA*LGSGQP Trigger: AGGTTGTCCGGAGCCTAGTCAAGCCTGAGAATTACA...CATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR GCA 90 bp | AAGGAAGGAACCAGTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCGTACTCTTCGACGCCTaGCTCCTCCGCGCCTACCTC | + |
Preference number: 4 (lower is better) Translates to: KEGTSPVSRSRLISTIKSVLFDA*LLRAYL Trigger: GAGGTAGGCGCGGAGGAGGCAGGCGTCGAAGAGTAC...GCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGACTGGTTCCTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR GCA 90 bp | GTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCTGAGATGAAACAGGTACTCTTCGACGCCTaGCTCCTCCGCGCCTACCTC | + |
Preference number: 4 (lower is better) Translates to: VLYLDQDSSVPSKAEMKQVLFDA*LLRAYL Trigger: GAGGTAGGCGCGGAGGAGGCAGGCGTCGAAGAGTAC...CTGTTTCATCTCAGCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR TCA 90 bp | GTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCTGAGATGAAACAGGCTCCTGACCTCAGGTaGTCCATCCGCCTTGGTCTC | + |
Preference number: 4 (lower is better) Translates to: VLYLDQDSSVPSKAEMKQAPDLR*SIRLGL Trigger: GAGACCAAGGCGGATGGATCACCTGAGGTCAGGAGC...CTGTTTCATCTCAGCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256474.3 |
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CDS-3UTR GCA 90 bp | GTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCTGAGATGAAACAGGGCTGGAGGTGGAAGTaGCACCTGGTCCTGCCTGAT | + |
Preference number: 4 (lower is better) Translates to: VLYLDQDSSVPSKAEMKQGWRWK*HLVLPD Trigger: ATCAGGCAGGACCAGGTGGCACTTCCACCTCCAGCC...CTGTTTCATCTCAGCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR GCA 90 bp | GTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGGAAACCAACCAAAATCTaGCCTAAAAAGGCTGGAAGG | + |
Preference number: 4 (lower is better) Translates to: VFPKQEADKSPTATDVEWKPTKI*PKKAGR Trigger: CCTTCCAGCCTTTTTAGGGCAGATTTTGGTTGGTTT...CCATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CCA 90 bp | GCAAAAATGCCACCACCTTCTCCTGATAAATACTTCTCTAATGGGCAGGCATTATTGCAGAAGATGACCTaGGAGGGCTCGCGCGAGTTC | + |
Preference number: 4 (lower is better) Translates to: AKMPPPSPDKYFSNGQALLQKMT*EGSREF Trigger: GAACTCGCGCGAGCCCTCCCAGGTCATCTTCTGCAA...TAATGCCTGCCCATTAGAGAAGTATTTATCAGGAGAAGGTGGTGGCATTTTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CCA 90 bp | AAGGAAGGAACCAGTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCTTGCAGAAGATGACCTaGGAGGGCTCGCGCGAGTTC | + |
Preference number: 4 (lower is better) Translates to: KEGTSPVSRSRLISTIKSLQKMT*EGSREF Trigger: GAACTCGCGCGAGCCCTCCCAGGTCATCTTCTGCAA...GCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGACTGGTTCCTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CCA 90 bp | AGTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGGTCTTTCTGCACATTTaGGTGGTCTTCCAGATCTTC | + |
Preference number: 4 (lower is better) Translates to: SLPKAGGRQVTNRYGCRMVFLHI*VVFQIF Trigger: GAAGATCTGGAAGACCACCCAAATGTGCAGAAAGAC...CATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CCA 90 bp | GCAAAAATGCCACCACCTTCTCCTGATAAATACTTCTCTAATGGGCAGGCATTAAATTGGCCAGCGTGGTaGCAGGCGCCTGTAATCCCA | + |
Preference number: 4 (lower is better) Translates to: AKMPPPSPDKYFSNGQALNWPAW*QAPVIP Trigger: TGGGATTACAGGCGCCTGCCACCACGCTGGCCAATT...TAATGCCTGCCCATTAGAGAAGTATTTATCAGGAGAAGGTGGTGGCATTTTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR TCA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTGCTCGCCGTCGAAGTTaGGCCATACGGGCAGCACGA | + |
Preference number: 4 (lower is better) Translates to: SRIFCADGKLQKCYYHNCARRRS*AIRAAR Trigger: TCGTGCTGCCCGTATGGCTCAACTTCGACGGCGAGC...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR TCA 90 bp | GTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCTGAGATGAAACAGCTGACTGAAGGCTCATaGTGTGCAGGCACTGGGGTC | + |
Preference number: 4 (lower is better) Translates to: VLYLDQDSSVPSKAEMKQLTEGS*CAGTGV Trigger: GACCCCAGTGCCTGCACATCATGAGCCTTCAGTCAG...CTGTTTCATCTCAGCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR TCA 90 bp | GCAAAAATGCCACCACCTTCTCCTGATAAATACTTCTCTAATGGGCAGGCATTACTCAGGAGGATTACGTaGACCCAGGAGGCAGAGGTT | + |
Preference number: 4 (lower is better) Translates to: AKMPPPSPDKYFSNGQALLRRIT*TQEAEV Trigger: AACCTCTGCCTCCTGGGTTCACGTAATCCTCCTGAG...TAATGCCTGCCCATTAGAGAAGTATTTATCAGGAGAAGGTGGTGGCATTTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR TCA 90 bp | GCAAAAATGCCACCACCTTCTCCTGATAAATACTTCTCTAATGGGCAGGCATTAGCCAGGAGAATCACTTaGACTCGGGAGGCAGAGCTT | + |
Preference number: 4 (lower is better) Translates to: AKMPPPSPDKYFSNGQALARRIT*TREAEL Trigger: AAGCTCTGCCTCCCGAGTTCAAGTGATTCTCCTGGC...TAATGCCTGCCCATTAGAGAAGTATTTATCAGGAGAAGGTGGTGGCATTTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000256474.3 |
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CDS-3UTR TCA 90 bp | GTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCTGAGATGAAACAGGTGTCCCTGCATCTCTaGAGAGCCAAAGGTGACCTC | + |
Preference number: 4 (lower is better) Translates to: VLYLDQDSSVPSKAEMKQVSLHL*RAKGDL Trigger: GAGGTCACCTTTGGCTCTTCAGAGATGCAGGGACAC...CTGTTTCATCTCAGCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256474.3 |
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CDS-3UTR TCA 90 bp | GCAAAAATGCCACCACCTTCTCCTGATAAATACTTCTCTAATGGGCAGGCATTAAGCCCAGGCTCATCTTaGAGTTCTGGGCTCAAGCAA | + |
Preference number: 4 (lower is better) Translates to: AKMPPPSPDKYFSNGQALSPGSS*SSGLKQ Trigger: TTGCTTGAGCCCAGAACTTCAAGATGAGCCTGGGCT...TAATGCCTGCCCATTAGAGAAGTATTTATCAGGAGAAGGTGGTGGCATTTTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR TCA 90 bp | AAGGAAGGAACCAGTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCAGCCCAGGCTCATCTTaGAGTTCTGGGCTCAAGCAA | + |
Preference number: 4 (lower is better) Translates to: KEGTSPVSRSRLISTIKSSPGSS*SSGLKQ Trigger: TTGCTTGAGCCCAGAACTTCAAGATGAGCCTGGGCT...GCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGACTGGTTCCTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR GCA 90 bp | GTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGGTTCTCGTATTTTCTGTaGGGATGGCAAGTTACAAAA | + |
Preference number: 4 (lower is better) Translates to: VFPKQEADKSPTATDVEWFSYFL*GWQVTK Trigger: TTTTGTAACTTGCCATCCGCACAGAAAATACGAGAA...CCATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR GCA 90 bp | GTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCTGAGATGAAACAGTCGCCCAGGTTAGAGTaGAGTGGCACCATCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: VLYLDQDSSVPSKAEMKQSPRLE*SGTISA Trigger: AGCTGAGATGGTGCCACTGCACTCTAACCTGGGCGA...CTGTTTCATCTCAGCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256474.3 |
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CDS-3UTR CCA 90 bp | AAGGAAGGAACCAGTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCGGCTTTCCAAAGTACTaGGATTACAGGCGGGAGCCA | + |
Preference number: 4 (lower is better) Translates to: KEGTSPVSRSRLISTIKSGFPKY*DYRREP Trigger: TGGCTCCCGCCTGTAATCCCAGTACTTTGGAAAGCC...GCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGACTGGTTCCTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR TCA 90 bp | GTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCTGAGATGAAACAGCTGACAAACCCTGACTaGAGGCTCATGATGTGCAGG | + |
Preference number: 4 (lower is better) Translates to: VLYLDQDSSVPSKAEMKQLTNPD*RLMMCR Trigger: CCTGCACATCATGAGCCTTCAGTCAGGGTTTGTCAG...CTGTTTCATCTCAGCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR GCA 90 bp | AGTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGGGAATTAAAGATGCATaGCAAGAAATACCCACAAAC | + |
Preference number: 4 (lower is better) Translates to: SLPKAGGRQVTNRYGCRMGIKDA*QEIPTN Trigger: GTTTGTGGGTATTTCTTGGCATGCATCTTTAATTCC...CATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CCA 90 bp | GTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGGCTTTCTTTTAAGCAATaGTGCCTATTTTACTCTGAG | + |
Preference number: 4 (lower is better) Translates to: VFPKQEADKSPTATDVEWLSFKQ*CLFYSE Trigger: CTCAGAGTAAAATAGGCACCATTGCTTAAAAGAAAG...CCATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CCA 90 bp | GCAAAAATGCCACCACCTTCTCCTGATAAATACTTCTCTAATGGGCAGGCATTAGCACTTCAACAAGAGTaGACCGAGAAAGTGCACGAC | + |
Preference number: 4 (lower is better) Translates to: AKMPPPSPDKYFSNGQALALQQE*TEKVHD Trigger: GTCGTGCACTTTCTCGGTCCACTCTTGTTGAAGTGC...TAATGCCTGCCCATTAGAGAAGTATTTATCAGGAGAAGGTGGTGGCATTTTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CCA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTAGGCTCTCGAGTAGCTaGGACTACAGGCGCTCACCA | + |
Preference number: 4 (lower is better) Translates to: SRIFCADGKLQKCYYHNCRLSSS*DYRRSP Trigger: TGGTGAGCGCCTGTAGTCCCAGCTACTCGAGAGCCT...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000256474.3 |
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CDS-3UTR TCA 90 bp | GTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCTGAGATGAAACAGTGTAATTCTCAGGCTTaGCTAGGCTCCGGACAACCT | + |
Preference number: 4 (lower is better) Translates to: VLYLDQDSSVPSKAEMKQCNSQA*LGSGQP Trigger: AGGTTGTCCGGAGCCTAGTCAAGCCTGAGAATTACA...CTGTTTCATCTCAGCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR TCA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTCTCAGGAGGATTACGTaGACCCAGGAGGCAGAGGTT | + |
Preference number: 4 (lower is better) Translates to: SRIFCADGKLQKCYYHNCLRRIT*TQEAEV Trigger: AACCTCTGCCTCCTGGGTTCACGTAATCCTCCTGAG...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR GCA 90 bp | AAGGAAGGAACCAGTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCGCTGGAGTACAATGGTaGGATATCAGCTCACTGCAA | + |
Preference number: 4 (lower is better) Translates to: KEGTSPVSRSRLISTIKSAGVQW*DISSLQ Trigger: TTGCAGTGAGCTGATATCGCACCATTGTACTCCAGC...GCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGACTGGTTCCTTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256474.3 |
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CDS-3UTR CCA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTAGGCTCCGGACAACCTaGAGGCATCGCTCTTTCAGA | + |
Preference number: 4 (lower is better) Translates to: SRIFCADGKLQKCYYHNCRLRTT*RHRSFR Trigger: TCTGAAAGAGCGATGCCTCCAGGTTGTCCGGAGCCT...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR TCA 90 bp | AAGGAAGGAACCAGTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCATTCCTAAACTCCAATaGTCTTCTCACCTCAGCCTG | + |
Preference number: 4 (lower is better) Translates to: KEGTSPVSRSRLISTIKSIPKLQ*SSHLSL Trigger: CAGGCTGAGGTGAGAAGATCATTGGAGTTTAGGAAT...GCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGACTGGTTCCTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR GCA 90 bp | AAGGAAGGAACCAGTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCATACTCATGGCTCACTaGAGCCTCCAATTCCTAAAC | + |
Preference number: 4 (lower is better) Translates to: KEGTSPVSRSRLISTIKSILMAH*SLQFLN Trigger: GTTTAGGAATTGGAGGCTGCAGTGAGCCATGAGTAT...GCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGACTGGTTCCTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CCA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTGGCTTTCCAAAGTACTaGGATTACAGGCGGGAGCCA | + |
Preference number: 4 (lower is better) Translates to: SRIFCADGKLQKCYYHNCGFPKY*DYRREP Trigger: TGGCTCCCGCCTGTAATCCCAGTACTTTGGAAAGCC...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CCA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTGTGATCCATCCGCCTTaGTCTCCCAAAATGCTGGGA | + |
Preference number: 4 (lower is better) Translates to: SRIFCADGKLQKCYYHNCVIHPP*SPKMLG Trigger: TCCCAGCATTTTGGGAGACCAAGGCGGATGGATCAC...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000256474.3 |
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CDS-3UTR TCA 90 bp | GTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCTGAGATGAAACAGATTCCTAAACTCCAATaGTCTTCTCACCTCAGCCTG | + |
Preference number: 4 (lower is better) Translates to: VLYLDQDSSVPSKAEMKQIPKLQ*SSHLSL Trigger: CAGGCTGAGGTGAGAAGATCATTGGAGTTTAGGAAT...CTGTTTCATCTCAGCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR GCA 90 bp | GTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCTGAGATGAAACAGATACTCATGGCTCACTaGAGCCTCCAATTCCTAAAC | + |
Preference number: 4 (lower is better) Translates to: VLYLDQDSSVPSKAEMKQILMAH*SLQFLN Trigger: GTTTAGGAATTGGAGGCTGCAGTGAGCCATGAGTAT...CTGTTTCATCTCAGCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CCA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTCAGGCTGGAGTACAATaGTGCGATATCAGCTCACTG | + |
Preference number: 4 (lower is better) Translates to: SRIFCADGKLQKCYYHNCQAGVQ*CDISSL Trigger: CAGTGAGCTGATATCGCACCATTGTACTCCAGCCTG...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000256474.3 |
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CDS-3UTR TCA 90 bp | AAGGAAGGAACCAGTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCTGCTGCAATTCCCACTaGATTACTTATACAAACCTC | + |
Preference number: 4 (lower is better) Translates to: KEGTSPVSRSRLISTIKSCCNSH*ITYTNL Trigger: GAGGTTTGTATAAGTAATTCAGTGGGAATTGCAGCA...GCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGACTGGTTCCTTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR TCA 90 bp | GCAAAAATGCCACCACCTTCTCCTGATAAATACTTCTCTAATGGGCAGGCATTATATTTTAAGTGGAGATaGGGTTTCACCATGTTAGCC | + |
Preference number: 4 (lower is better) Translates to: AKMPPPSPDKYFSNGQALYFKWR*GFTMLA Trigger: GGCTAACATGGTGAAACCTCATCTCCACTTAAAATA...TAATGCCTGCCCATTAGAGAAGTATTTATCAGGAGAAGGTGGTGGCATTTTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000256474.3 |
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CDS-3UTR TCA 90 bp | GTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCTGAGATGAAACAGACATTTAGAAAACTATaGAACAGTCCAGGCTACTCC | + |
Preference number: 4 (lower is better) Translates to: VLYLDQDSSVPSKAEMKQTFRKL*NSPGYS Trigger: GGAGTAGCCTGGACTGTTTCATAGTTTTCTAAATGT...CTGTTTCATCTCAGCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR GCA 90 bp | GTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCTGAGATGAAACAGTTCTCGTATTTTCTGTaGGGATGGCAAGTTACAAAA | + |
Preference number: 4 (lower is better) Translates to: VLYLDQDSSVPSKAEMKQFSYFL*GWQVTK Trigger: TTTTGTAACTTGCCATCCGCACAGAAAATACGAGAA...CTGTTTCATCTCAGCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CCA 90 bp | GCAAAAATGCCACCACCTTCTCCTGATAAATACTTCTCTAATGGGCAGGCATTAGCTACGGATGTAGAATaGATGTATTATACATCCATT | + |
Preference number: 4 (lower is better) Translates to: AKMPPPSPDKYFSNGQALATDVE*MYYTSI Trigger: AATGGATGTATAATACATCCATTCTACATCCGTAGC...TAATGCCTGCCCATTAGAGAAGTATTTATCAGGAGAAGGTGGTGGCATTTTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR TCA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTACATTTAGAAAACTATaGAACAGTCCAGGCTACTCC | + |
Preference number: 4 (lower is better) Translates to: SRIFCADGKLQKCYYHNCTFRKL*NSPGYS Trigger: GGAGTAGCCTGGACTGTTTCATAGTTTTCTAAATGT...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR GCA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTGGAATTAAAGATGCATaGCAAGAAATACCCACAAAC | + |
Preference number: 4 (lower is better) Translates to: SRIFCADGKLQKCYYHNCGIKDA*QEIPTN Trigger: GTTTGTGGGTATTTCTTGGCATGCATCTTTAATTCC...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CCA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTTTTCAGAGTATACACTaGCAGTGTGATATTGGCAAA | + |
Preference number: 4 (lower is better) Translates to: SRIFCADGKLQKCYYHNCFQSIH*QCDIGK Trigger: TTTGCCAATATCACACTGCCAGTGTATACTCTGAAA...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000256474.3 |
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CDS TCA 90 bp | TGCCAGGCGGCAGCGTTGGGTAGGGCTGCGGCTCGCCGTCGAAGTTaGGCCATACGGGCAGCACGACGCGCGGACTGCGATTGCAGAAGA | + |
Preference number: 5 (lower is better) Translates to: CQAAALGRAAARRRS*AIRAARRADCDCRR Trigger: TCTTCTGCAATCGCAGTCCGCGCGTCGTGCTGCCCGTATGGCTCAACTTCGACGGCGAGCCGCAGCCCTACCCAACGCTGCCGCCTGGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CAA 90 bp | AGTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGGGCTCGCCGTCGAAGTaGAGCCATACGGGCAGCACG | + |
Preference number: 5 (lower is better) Translates to: SLPKAGGRQVTNRYGCRMGSPSK*SHTGST Trigger: CGTGCTGCCCGTATGGCTCAACTTCGACGGCGAGCC...CATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CAA 90 bp | GCAAAAATGCCACCACCTTCTCCTGATAAATACTTCTCTAATGGGCAGGCATTATGCCAGGCGGCAGCGTaGGGTAGGGCTGCGGCTCGC | + |
Preference number: 5 (lower is better) Translates to: AKMPPPSPDKYFSNGQALCQAAA*GRAAAR Trigger: GCGAGCCGCAGCCCTACCCAACGCTGCCGCCTGGCA...TAATGCCTGCCCATTAGAGAAGTATTTATCAGGAGAAGGTGGTGGCATTTTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CAA 90 bp | GTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGGACTGGCAGTGTGATATaGGCAAAAATAGGCTGTCCG | + |
Preference number: 5 (lower is better) Translates to: VFPKQEADKSPTATDVEWTGSVI*AKIGCP Trigger: CGGACAGCCTATTTTTGCCAATATCACACTGCCAGT...CCATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000256474.3 |
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CDS-3UTR CAA 90 bp | GTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGGGGTCTTTCTGCACATTaGGGTGGTCTTCCAGATCTT | + |
Preference number: 5 (lower is better) Translates to: VFPKQEADKSPTATDVEWGLSAH*GGLPDL Trigger: AAGATCTGGAAGACCACCCAAATGTGCAGAAAGACC...CCATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CAA 90 bp | AGTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGCTAAAAGTACAAAAATaGGCCAGCGTGGTGGCAGGC | + |
Preference number: 5 (lower is better) Translates to: SLPKAGGRQVTNRYGCRMLKVQK*ASVVAG Trigger: GCCTGCCACCACGCTGGCCAATTTTTGTACTTTTAG...CATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CAA 90 bp | AGTCTTCCCAAAGCAGGAGGCAGACAAGTCACCAACCGCTACGGATGTAGAATGTTTGAGACAAGAGTATaGCTCTGTCACACAGGCTGG | + |
Preference number: 5 (lower is better) Translates to: SLPKAGGRQVTNRYGCRMFETRV*LCHTGW Trigger: CCAGCCTGTGTGACAGAGCAATACTCTTGTCTCAAA...CATTCTACATCCGTAGCGGTTGGTGACTTGTCTGCCTCCTGCTTTGGGAAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256474.3 |
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CDS-3UTR CAA 90 bp | GTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCTGAGATGAAACAGACGCGCGGACTGCGATaGCAGAAGATGACCTGGGAG | + |
Preference number: 5 (lower is better) Translates to: VLYLDQDSSVPSKAEMKQTRGLR*QKMTWE Trigger: CTCCCAGGTCATCTTCTGCAATCGCAGTCCGCGCGT...CTGTTTCATCTCAGCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CAA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTGGCTCGCCGTCGAAGTaGAGCCATACGGGCAGCACG | + |
Preference number: 5 (lower is better) Translates to: SRIFCADGKLQKCYYHNCGSPSK*SHTGST Trigger: CGTGCTGCCCGTATGGCTCAACTTCGACGGCGAGCC...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CAA 90 bp | GCAAAAATGCCACCACCTTCTCCTGATAAATACTTCTCTAATGGGCAGGCATTACCTGAGGTCAGGAGTTaGAAACCAGCCTGGCCAACA | + |
Preference number: 5 (lower is better) Translates to: AKMPPPSPDKYFSNGQALPEVRS*KPAWPT Trigger: TGTTGGCCAGGCTGGTTTCAAACTCCTGACCTCAGG...TAATGCCTGCCCATTAGAGAAGTATTTATCAGGAGAAGGTGGTGGCATTTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CAA 90 bp | AAGGAAGGAACCAGTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCCCTGAGGTCAGGAGTTaGAAACCAGCCTGGCCAACA | + |
Preference number: 5 (lower is better) Translates to: KEGTSPVSRSRLISTIKSPEVRS*KPAWPT Trigger: TGTTGGCCAGGCTGGTTTCAAACTCCTGACCTCAGG...GCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGACTGGTTCCTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CAA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTACGCGCGGACTGCGATaGCAGAAGATGACCTGGGAG | + |
Preference number: 5 (lower is better) Translates to: SRIFCADGKLQKCYYHNCTRGLR*QKMTWE Trigger: CTCCCAGGTCATCTTCTGCAATCGCAGTCCGCGCGT...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CAA 90 bp | AAGGAAGGAACCAGTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCTCAATCTCCCATCCGTaGATGTGCAATGCGCTCCTG | + |
Preference number: 5 (lower is better) Translates to: KEGTSPVSRSRLISTIKSSISHP*MCNALL Trigger: CAGGAGCGCATTGCACATCAACGGATGGGAGATTGA...GCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGACTGGTTCCTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CAA 90 bp | AAGGAAGGAACCAGTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCCTAAAAGTACAAAAATaGGCCAGCGTGGTGGCAGGC | + |
Preference number: 5 (lower is better) Translates to: KEGTSPVSRSRLISTIKSLKVQK*ASVVAG Trigger: GCCTGCCACCACGCTGGCCAATTTTTGTACTTTTAG...GCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGACTGGTTCCTTCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CAA 90 bp | AAGGAAGGAACCAGTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCTACTCCATGAATCCATaGGTAGGACCAGAGGCTGGA | + |
Preference number: 5 (lower is better) Translates to: KEGTSPVSRSRLISTIKSYSMNP*VGPEAG Trigger: TCCAGCCTCTGGTCCTACCAATGGATTCATGGAGTA...GCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGACTGGTTCCTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CAA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTGGTGATCCATCCGCCTaGGTCTCCCAAAATGCTGGG | + |
Preference number: 5 (lower is better) Translates to: SRIFCADGKLQKCYYHNCGDPSA*VSQNAG Trigger: CCCAGCATTTTGGGAGACCAAGGCGGATGGATCACC...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000256474.3 |
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CDS-3UTR CAA 90 bp | GCAAAAATGCCACCACCTTCTCCTGATAAATACTTCTCTAATGGGCAGGCATTAAGCAATCCTCTTACCTaGGCTTTCCAAAGTACTGGG | + |
Preference number: 5 (lower is better) Translates to: AKMPPPSPDKYFSNGQALSNPLT*AFQSTG Trigger: CCCAGTACTTTGGAAAGCCAAGGTAAGAGGATTGCT...TAATGCCTGCCCATTAGAGAAGTATTTATCAGGAGAAGGTGGTGGCATTTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CAA 90 bp | GTCCTGTATCTAGATCAAGACTCATCAGTACCATCAAAAGCTGAGATGAAACAGGGTCTTTCTGCACATTaGGGTGGTCTTCCAGATCTT | + |
Preference number: 5 (lower is better) Translates to: VLYLDQDSSVPSKAEMKQGLSAH*GGLPDL Trigger: AAGATCTGGAAGACCACCCAAATGTGCAGAAAGACC...CTGTTTCATCTCAGCTTTTGATGGTACTGATGAGTCTTGATCTAGATACAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CAA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTTCAATCTCCCATCCGTaGATGTGCAATGCGCTCCTG | + |
Preference number: 5 (lower is better) Translates to: SRIFCADGKLQKCYYHNCSISHP*MCNALL Trigger: CAGGAGCGCATTGCACATCAACGGATGGGAGATTGA...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS-3UTR CAA 90 bp | TCTCGTATTTTCTGTGCGGATGGCAAGTTACAAAAATGCTATTATCACAACTGTTACTCCATGAATCCATaGGTAGGACCAGAGGCTGGA | + |
Preference number: 5 (lower is better) Translates to: SRIFCADGKLQKCYYHNCYSMNP*VGPEAG Trigger: TCCAGCCTCTGGTCCTACCAATGGATTCATGGAGTA...ACAGTTGTGATAATAGCATTTTTGTAACTTGCCATCCGCACAGAAAATACGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS TCA 72 bp | GCAGCGTTGGGTAGGGCTGCGGCTCGCCGTCGAAGTTaGGCCATACGGGCAGCACGACGCGCGGACTGCGAT | + |
Preference number: 6 (lower is better) Translates to: AALGRAAARRRS*AIRAARRADCD Trigger: ATCGCAGTCCGCGCGTCGTGCTGCCCGTATGGCTCAACTTCGACGGCGAGCCGCAGCCCTACCCAACGCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS CAA 90 bp | CCGTCGAAGTTGAGCCATACGGGCAGCACGACGCGCGGACTGCGATaGCAGAAGATGACCTGGGAGGGCTCGCGCGAGTTCACCGAGCGC | + |
Preference number: 6 (lower is better) Translates to: PSKLSHTGSTTRGLR*QKMTWEGSREFTER Trigger: GCGCTCGGTGAACTCGCGCGAGCCCTCCCAGGTCATCTTCTGCAATCGCAGTCCGCGCGTCGTGCTGCCCGTATGGCTCAACTTCGACGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS CAA 72 bp | TTGAGCCATACGGGCAGCACGACGCGCGGACTGCGATaGCAGAAGATGACCTGGGAGGGCTCGCGCGAGTTC | + |
Preference number: 6 (lower is better) Translates to: LSHTGSTTRGLR*QKMTWEGSREF Trigger: GAACTCGCGCGAGCCCTCCCAGGTCATCTTCTGCAATCGCAGTCCGCGCGTCGTGCTGCCCGTATGGCTCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256474.3 ENST00000345392.2 |
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CDS CAA 90 bp | GGTCGGCTCTTCCGGCGCCAACATGACCCTGGCTTGTTCCTGTCTTaGCATCTGTCAGTCTCCCCAGGAGGAATGTGTTCTCCACGAGGG | + |
Preference number: 6 (lower is better) Translates to: GRLFRRQHDPGLFLS*HLSVSPGGMCSPRG Trigger: CCCTCGTGGAGAACACATTCCTCCTGGGGAGACTGACAGATGCAAAGACAGGAACAAGCCAGGGTCATGTTGGCGCCGGAAGAGCCGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477538.1 |
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CDS CCA 72 bp | AATGTGTTCTCCACGAGGGCAGGGACTACGCAGAACTaGCCCACTGGAGTCATGAGGACTGAACAGATGGGG | + |
Preference number: 6 (lower is better) Translates to: NVFSTRAGTTQN*PTGVMRTEQMG Trigger: CCCCATCTGTTCAGTCCTCATGACTCCAGTGGGCCAGTTCTGCGTAGTCCCTGCCCTCGTGGAGAACACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477538.1 |
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CDS GCA 72 bp | TCCGGCGCCAACATGACCCTGGCTTGTTCCTGTCTTTaGATCTGTCAGTCTCCCCAGGAGGAATGTGTTCTC | + |
Preference number: 6 (lower is better) Translates to: SGANMTLACSCL*ICQSPQEECVL Trigger: GAGAACACATTCCTCCTGGGGAGACTGACAGATGCAAAGACAGGAACAAGCCAGGGTCATGTTGGCGCCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477538.1 |
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CDS CAA 72 bp | TTCCGGCGCCAACATGACCCTGGCTTGTTCCTGTCTTaGCATCTGTCAGTCTCCCCAGGAGGAATGTGTTCT | + |
Preference number: 6 (lower is better) Translates to: FRRQHDPGLFLS*HLSVSPGGMCS Trigger: AGAACACATTCCTCCTGGGGAGACTGACAGATGCAAAGACAGGAACAAGCCAGGGTCATGTTGGCGCCGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477538.1 |
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CDS TCA 72 bp | GACTACGCAGAACTGGCCCACTGGAGTCATGAGGACTaGACAGATGGGGTGTTAAGGATGCAGCTTTTCTTT | + |
Preference number: 6 (lower is better) Translates to: DYAELAHWSHED*TDGVLRMQLFF Trigger: AAAGAAAAGCTGCATCCTTAACACCCCATCTGTTCAGTCCTCATGACTCCAGTGGGCCAGTTCTGCGTAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477538.1 |