RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VEPH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000197415

Ensembl transcript IDs: ENST00000362010.7, ENST00000392832.6, ENST00000392833.6, ENST00000461299.5, ENST00000468233.5, ENST00000469007.1, ENST00000472419.1, ENST00000473907.5, ENST00000475050.5, ENST00000479987.5, ENST00000482434.1, ENST00000482685.5, ENST00000483440.1, ENST00000487753.5, ENST00000488772.1, ENST00000489602.1, ENST00000490235.5, ENST00000494677.5, ENST00000537559.5

Found 646 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTaGCTGGGGCTGGGCTTTTATCTGAGGTTCAGATGCTTCTTCCAA +
Preference number: 1 (lower is better)
Translates to: AGSSAQSFTKLQARR*LGLGFYLRFRCFFQ
Trigger: TTGGAAGAAGCATCTGAACCTCAGATAAAAGCCCAGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
3UTR TCA 90 bp TCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTGGGCTTTTATCTaGGGTTCAGATGCTTCTTCCAAGATCACATGGTTGTTCACAAAA +
Preference number: 1 (lower is better)
Translates to: SQSCKQGVGWGWAFI*GSDASSKITWLFTK
Trigger: TTTTGTGAACAACCATGTGATCTTGGAAGAAGCATCTGAACCTCAGATAAAAGCCCAGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
3UTR GCA 90 bp CTCTCTGATGGCTGTTGTGATTCTTGTGATACAGATTTCAACTACTaGCTGGTCATTGTTATTGGTTTGGTAATCCACCACCACTGCTCC +
Preference number: 1 (lower is better)
Translates to: LSDGCCDSCDTDFNY*LVIVIGLVIHHHCS
Trigger: GGAGCAGTGGTGGTGGATTACCAAACCAATAACAATGACCAGGCAGTAGTTGAAATCTGTATCACAAGAATCACAACAGCCATCAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
3UTR TCA 90 bp ATACATTTATTATCTGAAAGTTTCTGTGGGTCAGGAGTCCAAACGTaGTTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGC +
Preference number: 1 (lower is better)
Translates to: IHLLSESFCGSGVQT*FSWVLCSEFHKAAS
Trigger: GCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATCACGTTTGGACTCCTGACCCACAGAAACTTTCAGATAATAAATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
3UTR CAA 90 bp AGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTaGGCTGGGGCTGGGCTTTTATCTGAGGTTCAGATGCTTCTTCCA +
Preference number: 2 (lower is better)
Translates to: SWVLCSEFHKAASKA*AGAGLLSEVQMLLP
Trigger: TGGAAGAAGCATCTGAACCTCAGATAAAAGCCCAGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
3UTR-3UTR TCA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTCCCAGGGGATCTCTTTaGTTAACTCAAAGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: WVLCSEFHKAASKALAGAPRGSL*LTQSQL
Trigger: CAGCTGACTTTGAGTTAATCAAAGAGATCCCCTGGG...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
3UTR-3UTR CCA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTATAACTGGCTTGATTTaGGAACCATTTTACCATGTG +
Preference number: 2 (lower is better)
Translates to: WVLCSEFHKAASKALAGAITGLI*EPFYHV
Trigger: CACATGGTAAAATGGTTCCCAAATCAAGCCAGTTAT...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
3UTR-3UTR CCA 90 bp ACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGGTAATTCATCTGCCTTaGGAAGGGACACAGACAGCC +
Preference number: 2 (lower is better)
Translates to: TCSTQYTEIRSPQLVVEQVIHLP*EGTQTA
Trigger: GGCTGTCTGTGTCCCTTCCCAAGGCAGATGAATTAC...CTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
3UTR-3UTR TCA 90 bp CACAAGGGCCTTTGCATGCTTTTCAATGGACTCGGTCTCTCTGATGGCTGTTGTCTGCTTCTTCTTATCTaGATTATTTCAGTAGCCACT +
Preference number: 2 (lower is better)
Translates to: HKGLCMLFNGLGLSDGCCLLLLI*IISVAT
Trigger: AGTGGCTACTGAAATAATTCAGATAAGAAGAAGCAG...ACAACAGCCATCAGAGAGACCGAGTCCATTGAAAAGCATGCAAAGGCCCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473907.5
3UTR-3UTR CCA 90 bp CTTTGCATGCTTTTCAATGGACTCGGTCTCTCTGATGGCTGTTGTGATTCTTGTCCTGGTCATTGTTATTaGTTTGGTAATCCACCACCA +
Preference number: 2 (lower is better)
Translates to: LCMLFNGLGLSDGCCDSCPGHCY*FGNPPP
Trigger: TGGTGGTGGATTACCAAACCAATAACAATGACCAGG...ACAAGAATCACAACAGCCATCAGAGAGACCGAGTCCATTGAAAAGCATGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473907.5
3UTR-3UTR CCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCAATCTTTCCTCAGGATaGAGAGTTCAGGCATCTTTT +
Preference number: 2 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGNLSSG*RVQASF
Trigger: AAAAGATGCCTGAACTCTCCATCCTGAGGAAAGATT...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
3UTR-3UTR CCA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGAATAACTGGCTTGATTTaGGAACCATTTTACCATGTG +
Preference number: 2 (lower is better)
Translates to: FLAAVELMAACLFKANRRITGLI*EPFYHV
Trigger: CACATGGTAAAATGGTTCCCAAATCAAGCCAGTTAT...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
3UTR-3UTR GCA 90 bp TGTTGTGATTCTTGTGATACAGATTTCAACTACTGCCTGGTCATTGTTATTGGTACATATTCGCATCATTaGAAGTGCAGGAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: CCDSCDTDFNYCLVIVIGTYSHH*KCRRSH
Trigger: GTGGCTTCTCCTGCACTTGCAATGATGCGAATATGT...ACCAATAACAATGACCAGGCAGTAGTTGAAATCTGTATCACAAGAATCACAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473907.5
3UTR-3UTR CCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCATAATACAATGCCTGTaGTGTATAATTGTCATGGCT +
Preference number: 2 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGIIQCL*CIIVMA
Trigger: AGCCATGACAATTATACACCACAGGCATTGTATTAT...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
3UTR-3UTR CCA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTAATAATACAATGCCTGTaGTGTATAATTGTCATGGCT +
Preference number: 2 (lower is better)
Translates to: WEPFYHVLASVVVREDHVIIQCL*CIIVMA
Trigger: AGCCATGACAATTATACACCACAGGCATTGTATTAT...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
3UTR CCA 72 bp TCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTaGCTGGGGCTGGGCTTTTATCTGAGGTTCAGATGC +
Preference number: 3 (lower is better)
Translates to: SAQSFTKLQARR*LGLGFYLRFRC
Trigger: GCATCTGAACCTCAGATAAAAGCCCAGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
3UTR-3UTR CAA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCCAAGGCATGGATTATaGAGAATCACTCTAGAATTC +
Preference number: 3 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWPRHGL*RITLEF
Trigger: GAATTCTAGAGTGATTCTCAATAATCCATGCCTTGG...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
3UTR-3UTR CAA 90 bp ACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGAGTAATTCATCTGCCTaGGGAAGGGACACAGACAGC +
Preference number: 3 (lower is better)
Translates to: TCSTQYTEIRSPQLVVEQSNSSA*GRDTDS
Trigger: GCTGTCTGTGTCCCTTCCCAAGGCAGATGAATTACT...CTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
3UTR TCA 72 bp TCTCTGACTGGTTCACTCTCTTTTAAAGGACTAGTCTaGTTAGGTCAGGCCCACCCAGGGGATCTCTTTGAT +
Preference number: 3 (lower is better)
Translates to: SLTGSLSFKGLV*LGQAHPGDLFD
Trigger: ATCAAAGAGATCCCCTGGGTGGGCCTGACCTAATCAGACTAGTCCTTTAAAAGAGAGTGAACCAGTCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
3UTR-3UTR CAA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGTTTTGCCATATTCTGTaGGTTAGAAGCAGGTTACAT +
Preference number: 3 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWFCHIL*VRSRLH
Trigger: ATGTAACCTGCTTCTAACCAACAGAATATGGCAAAA...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
3UTR-3UTR CAA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGAACCCAGGGGATCTCTTaGATTAACTCAAAGTCAGCT +
Preference number: 3 (lower is better)
Translates to: FLAAVELMAACLFKANRRTQGIS*INSKSA
Trigger: AGCTGACTTTGAGTTAATCAAAGAGATCCCCTGGGT...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
3UTR-3UTR CAA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGTCCAAGATCACATGGTaGTTCACAAAACTTATTTCC +
Preference number: 3 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWSKITW*FTKLIS
Trigger: GGAAATAAGTTTTGTGAACAACCATGTGATCTTGGA...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
3UTR TCA 72 bp TTATCTGAAAGTTTCTGTGGGTCAGGAGTCCAAACGTaGTTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAA +
Preference number: 3 (lower is better)
Translates to: LSESFCGSGVQT*FSWVLCSEFHK
Trigger: TTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATCACGTTTGGACTCCTGACCCACAGAAACTTTCAGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
3UTR-3UTR CAA 90 bp TCTGATGGCTGTTGTGATTCTTGTGATACAGATTTCAACTACTGCCTGGTCATTGACATATTCGCATCATaGCAAGTGCAGGAGAAGCCA +
Preference number: 3 (lower is better)
Translates to: SDGCCDSCDTDFNYCLVIDIFAS*QVQEKP
Trigger: TGGCTTCTCCTGCACTTGCAATGATGCGAATATGTC...AATGACCAGGCAGTAGTTGAAATCTGTATCACAAGAATCACAACAGCCATCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473907.5
3UTR TCA 72 bp TTGGAAGCAAATGAAGACAGGTTTTTCATACCCCACTaGGTGACGTGTTCCACTCAGTACACAGAGATAAGA +
Preference number: 3 (lower is better)
Translates to: LEANEDRFFIPH*VTCSTQYTEIR
Trigger: TCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAACCTGTCTTCATTTGCTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
3UTR CCA 72 bp CCCACACTCAATGGGGGAGAGGATTATACCAAGGCATaGATTATTGAGAATCACTCTAGAATTCTGTCTATC +
Preference number: 3 (lower is better)
Translates to: PTLNGGEDYTKA*IIENHSRILSI
Trigger: GATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCTCTCCCCCATTGAGTGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
3UTR-3UTR CAA 90 bp ACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAACTGAGAAACACAGATTaGGAAGAATGCTTACAATTC +
Preference number: 3 (lower is better)
Translates to: TEIRSPQLVVEQVTRSTELRNTD*EECLQF
Trigger: GAATTGTAAGCATTCTTCCAAATCTGTGTTTCTCAG...TTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCTTATCTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
3UTR GCA 72 bp GGCTGTTGTGATTCTTGTGATACAGATTTCAACTACTaGCTGGTCATTGTTATTGGTTTGGTAATCCACCAC +
Preference number: 3 (lower is better)
Translates to: GCCDSCDTDFNY*LVIVIGLVIHH
Trigger: GTGGTGGATTACCAAACCAATAACAATGACCAGGCAGTAGTTGAAATCTGTATCACAAGAATCACAACAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
3UTR-3UTR CAA 90 bp ACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGAGATTAAGTAACCTTTaGCATGTTCACAGGTCAACT +
Preference number: 3 (lower is better)
Translates to: TCSTQYTEIRSPQLVVEQRLSNL*HVHRST
Trigger: AGTTGACCTGTGAACATGCAAAAGGTTACTTAATCT...CTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
3UTR-3UTR CAA 90 bp GTTGTGATTCTTGTGATACAGATTTCAACTACTGCCTGGTCATTGTTATTGGTTTTTCTGATTTCACTCTaGCCTTTCCACAGACATATT +
Preference number: 3 (lower is better)
Translates to: VVILVIQISTTAWSLLLVFLISL*PFHRHI
Trigger: AATATGTCTGTGGAAAGGCAAGAGTGAAATCAGAAA...AACCAATAACAATGACCAGGCAGTAGTTGAAATCTGTATCACAAGAATCACAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473907.5
3UTR CCA 72 bp GAAAGACAAGTATTTAATGACATAACTGGCTTGATTTaGGAACCATTTTACCATGTGTTAGCCTCAGTTGTA +
Preference number: 3 (lower is better)
Translates to: ERQVFNDITGLI*EPFYHVLASVV
Trigger: TACAACTGAGGCTAACACATGGTAAAATGGTTCCCAAATCAAGCCAGTTATGTCATTAAATACTTGTCTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTGCTCAGAGGCAGCCTTaGAGCTGCTGCCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: WVLCSEFHKAASKALAGAAQRQP*SCCPVL
Trigger: CAGGACTGGGCAGCAGCTGCAAGGCTGCCTCTGAGC...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362010.7
CDS-3UTR GCA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTTTTGGCTTGGGCAACTaGCACGTTGATGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: WVLCSEFHKAASKALAGAFGLGN*HVDALE
Trigger: CTCCAGTGCATCAACGTGGCAGTTGCCCAAGCCAAA...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTACTATAACTTCCGTGTaGTCAGCCAGGAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: WVLCSEFHKAASKALAGATITSV*SARRSA
Trigger: GGCAGATCTCCTGGCTGATCACACGGAAGTTATAGT...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTCCTTCAGGGAGCAGGTaGAGAACAACTTTGCTACAC +
Preference number: 4 (lower is better)
Translates to: WVLCSEFHKAASKALAGAPSGSR*RTTLLH
Trigger: GTGTAGCAAAGTTGTTCTTCACCTGCTCCCTGAAGG...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp CTGCCTTGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACTCAAGGAATGCAGCCTaGTGCCACCGGCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LPWEGTQTARLSNLLHVHSRNAA*CHRQPQ
Trigger: CTGGGGCTGCCGGTGGCATCAGGCTGCATTCCTTGA...GTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCAAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494677.5
CDS-3UTR GCA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTAGAGTTTCACAAAGCTaGAAGCAAGGCGTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: WVLCSEFHKAASKALAGARVSQS*KQGVGW
Trigger: CCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCT...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTATGTCAGGCAGCTCCTaGCTCTCTCTTCATCCACAT +
Preference number: 4 (lower is better)
Translates to: WVLCSEFHKAASKALAGAMSGSS*LSLHPH
Trigger: ATGTGGATGAAGAGAGAGCCAGGAGCTGCCTGACAT...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTTCCCTTTCTTTGGCTTaGGCAACTGCCACGTTGATG +
Preference number: 4 (lower is better)
Translates to: WVLCSEFHKAASKALAGASLSLA*ATATLM
Trigger: CATCAACGTGGCAGTTGCCCAAGCCAAAGAAAGGGA...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGTCTGGCTGTTCCAGCTaGGACATCAAGGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWSGCSS*DIKARS
Trigger: ACTCCTGGCCTTGATGTCTCAGCTGGAACAGCCAGA...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTCACTCTGTACTTTGCTaGGTTCTATTGGGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: WVLCSEFHKAASKALAGAHSVLC*VLLGSR
Trigger: ACGACTGCCCAATAGAACTCAGCAAAGTACAGAGTG...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp TGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACAGGTCACAGAGACCGGTCAGGTaGCAGGCTGCACCTCACCCA +
Preference number: 4 (lower is better)
Translates to: WEGTQTARLSNLLHVHRSQRPVR*QAAPHP
Trigger: TGGGTGAGGTGCAGCCTGTCACCTGACCGGTCTCTG...TGACCTGTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494677.5
CDS-3UTR GCA 90 bp AGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAAATGCAGTTCCCTGAAGTTGTTCATTaGGGAGCCGGTGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: RSPQLVVEQVTRSTEMQFPEVVH*GAGAGW
Trigger: CCACCCGGCACCGGCTCCGCAATGAACAACTTCAGG...GAACTGCATTTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494677.5
CDS-3UTR GCA 90 bp CATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGGTCAGGTGACAGGCTaGACCTCACCCAGCGGAGTT +
Preference number: 4 (lower is better)
Translates to: HTPLSDVFHSVHRDKISTGQVTG*TSPSGV
Trigger: AACTCCGCTGGGTGAGGTGCAGCCTGTCACCTGACC...TGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494677.5
3UTR CAA 72 bp CTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTaGGCTGGGGCTGGGCTTTTATCTGAGGTTCAGATG +
Preference number: 4 (lower is better)
Translates to: LCSEFHKAASKA*AGAGLLSEVQM
Trigger: CATCTGAACCTCAGATAAAAGCCCAGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTGATGCGATTTTTGCATaGGGAGTGTCTTCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: WVLCSEFHKAASKALAGADAIFA*GVSSSF
Trigger: GAAAGACGAAGACACTCCTCATGCAAAAATCGCATC...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGAAGATGTCTCTGCTCTaGGGGCCCAAGATTGAGGAG +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWKMSLL*GPKIEE
Trigger: CTCCTCAATCTTGGGCCCTCAGAGCAGAGACATCTT...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGAGACTCCCCCAGCTGTaGTCTCTCAGTGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWRLPQL*SLSVCL
Trigger: AAGACAGACACTGAGAGATCACAGCTGGGGGAGTCT...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTTCTTCAATGGTACACTaGTCAGGGACTGGAATCTTC +
Preference number: 4 (lower is better)
Translates to: WVLCSEFHKAASKALAGASSMVH*SGTGIF
Trigger: GAAGATTCCAGTCCCTGATCAGTGTACCATTGAAGA...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGTGGTCCAGATCCTTCTaGTGTGGAAACGTGGACTCC +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWWSRSF*CGNVDS
Trigger: GGAGTCCACGTTTCCACAGCAGAAGGATCTGGACCA...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362010.7
CDS-3UTR CCA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTACTTGCAGTTGTCTCTaGAGTTTCTTCCTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: WVLCSEFHKAASKALAGATCSCL*SFFLGV
Trigger: AACTCCCAGGAAGAAACTCCAGAGACAACTGCAAGT...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp CAGGTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGCGAGGGCACAGCGAGTaGAATCCGCTCAGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: QVFHTPLSDVFHSVHRDKRGHSE*NPLSSV
Trigger: CACTGAGCTGAGCGGATTCCACTCGCTGTGCCCTCG...CTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494677.5
CDS-3UTR TCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGGAGGTCCCCAGCTCGTaGAAGATCTTTTTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWEVPSS*KIFLSQ
Trigger: TTGGGACAAAAAGATCTTTCACGAGCTGGGGACCTC...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCAGGATTGTTGCACATaGAGCATTGCCATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWQDCCT*SIAMLL
Trigger: CAGGAGCATGGCAATGCTTCATGTGCAACAATCCTG...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp CATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACACTCAGCTGCATGGTTTaGGACTGGGCGGGAGATTCA +
Preference number: 4 (lower is better)
Translates to: HTPLSDVFHSVHRDKISTLSCMV*DWAGDS
Trigger: TGAATCTCCCGCCCAGTCTCAAACCATGCAGCTGAG...TGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494677.5
CDS-3UTR GCA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTGAGCTCATGGCAGCTTaGTTATTTAAGGCTAATAGG +
Preference number: 4 (lower is better)
Translates to: WVLCSEFHKAASKALAGAELMAA*LFKANR
Trigger: CCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTC...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp ACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTCCTCAAAGGCGCCCTTaGAGTTACTCAGCTGCATGG +
Preference number: 4 (lower is better)
Translates to: TPLSDVFHSVHRDKISTVPQRRP*SYSAAW
Trigger: CCATGCAGCTGAGTAACTGCAAGGGCGCCTTTGAGG...AACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494677.5
CDS-3UTR GCA 90 bp CATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACATCATTGCGGAGCCGGTaGCGGGTGGAAGAATTCAAG +
Preference number: 4 (lower is better)
Translates to: HTPLSDVFHSVHRDKISTSLRSR*RVEEFK
Trigger: CTTGAATTCTTCCACCCGGCACCGGCTCCGCAATGA...TGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494677.5
CDS-3UTR CCA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTACACTCTCAACAACATaGTGTTACCTTGGAGTATGC +
Preference number: 4 (lower is better)
Translates to: WVLCSEFHKAASKALAGATLSTT*CYLGVC
Trigger: GCATACTCCAAGGTAACACCATGTTGTTGAGAGTGT...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTAGCTTGTCATTTCCTTaGCCAAGTGGGTCTATTTCT +
Preference number: 4 (lower is better)
Translates to: WVLCSEFHKAASKALAGASLSFP*PSGSIS
Trigger: AGAAATAGACCCACTTGGCCAAGGAAATGACAAGCT...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGACCAGTCTGAACAGTTaGTGCATGGTGAGGATGAGT +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWTSLNS*CMVRMS
Trigger: ACTCATCCTCACCATGCATCAACTGTTCAGACTGGT...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGACTGAGGGCCCAAGATTaGGGAGAAGGTGTCGGTGAT +
Preference number: 4 (lower is better)
Translates to: FLAAVELMAACLFKANRRLRAQD*GEGVGD
Trigger: ATCACCGACACCTTCTCCTCAATCTTGGGCCCTCAG...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGAGGGCAACTGCCACGTTaGTGCACTGGAGCCATTCTT +
Preference number: 4 (lower is better)
Translates to: FLAAVELMAACLFKANRRGQLPR*CTGAIL
Trigger: AAGAATGGCTCCAGTGCATCAACGTGGCAGTTGCCC...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp GTAATCCACCACCACTGCTCCATGATGGTCAGAACCTCTGCTTCTTCTTATCTGACCACCACTGCTCCATaGTGGTCAGAACCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: VIHHHCSMMVRTSASSYLTTTAP*WSEPLL
Trigger: AAGCAGAGGTTCTGACCATCATGGAGCAGTGGTGGT...CAGATAAGAAGAAGCAGAGGTTCTGACCATCATGGAGCAGTGGTGGTGGATTAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR GCA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTAAGGCAGCCTTGCAGCTaGTGCCCAGTCCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: WEPFYHVLASVVVREDHVRQPCS*CPVLWA
Trigger: AGCCCACAGGACTGGGCAGCAGCTGCAAGGCTGCCT...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362010.7
CDS-3UTR GCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGGCATTGCCATGCTCCTaGTGTTTCACTGAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWALPCS*CFTEAK
Trigger: TTTGGCTTCAGTGAAACAGCAGGAGCATGGCAATGC...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGAGCCATTCTTCTaGATTCTTCTCATCCTTGGC +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWLEPFF*ILLILG
Trigger: GCCAAGGATGAGAAGAATGCAGAAGAATGGCTCCAG...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp CTGCCTTGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACTCACTGCAATGGGGATaGCTAATGCCATCACTGGGG +
Preference number: 4 (lower is better)
Translates to: LPWEGTQTARLSNLLHVHSLQWG*LMPSLG
Trigger: CCCCAGTGATGGCATTAGCCATCCCCATTGCAGTGA...GTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCAAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR CCA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTATCCCTACAGATATGTaGTTACTTCTCTACTTTCCC +
Preference number: 4 (lower is better)
Translates to: WVLCSEFHKAASKALAGAIPTDM*LLLYFP
Trigger: GGGAAAGTAGAGAAGTAACCACATATCTGTAGGGAT...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTAATCTTTCCTCAGGATaGAGAGTTCAGGCATCTTTT +
Preference number: 4 (lower is better)
Translates to: WVLCSEFHKAASKALAGANLSSG*RVQASF
Trigger: AAAAGATGCCTGAACTCTCCATCCTGAGGAAAGATT...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp AGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAAATGCAGTTCGAGGTCCCCAGCTCGTaGAAGATCTTTTTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: RSPQLVVEQVTRSTEMQFEVPSS*KIFLSQ
Trigger: TTGGGACAAAAAGATCTTTCACGAGCTGGGGACCTC...GAACTGCATTTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR TCA 90 bp CATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGAGGTCCCCAGCTCGTaGAAGATCTTTTTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: HTPLSDVFHSVHRDKISTEVPSS*KIFLSQ
Trigger: TTGGGACAAAAAGATCTTTCACGAGCTGGGGACCTC...TGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR TCA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGAAGACTCCCCCAGCTGTaGTCTCTCAGTGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: FLAAVELMAACLFKANRRRLPQL*SLSVCL
Trigger: AAGACAGACACTGAGAGATCACAGCTGGGGGAGTCT...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGGCTGAAATAGAAACATaGTCTGGATCCATGGCTGAG +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWAEIET*SGSMAE
Trigger: CTCAGCCATGGATCCAGATCATGTTTCTATTTCAGC...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGAGAGGCTGGCCATCTTaGTTTACAACAGTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWRGWPS*FTTVAF
Trigger: GAAAGCAACTGTTGTAAATCAAGATGGCCAGCCTCT...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp CTGCCTTGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACTCATACCCCACTGAGTaGCGTGTTCCACTCAGTACA +
Preference number: 4 (lower is better)
Translates to: LPWEGTQTARLSNLLHVHSYPTE*RVPLST
Trigger: TGTACTGAGTGGAACACGTCACTCAGTGGGGTATGA...GTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCAAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR TCA 90 bp CATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACATCATACCCCACTGAGTaGCGTGTTCCACTCAGTACA +
Preference number: 4 (lower is better)
Translates to: HTPLSDVFHSVHRDKISTSYPTE*RVPLST
Trigger: TGTACTGAGTGGAACACGTCACTCAGTGGGGTATGA...TGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR TCA 90 bp AGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAAATGCAGTTCTCATACCCCACTGAGTaGCGTGTTCCACTCAGTACA +
Preference number: 4 (lower is better)
Translates to: RSPQLVVEQVTRSTEMQFSYPTE*RVPLST
Trigger: TGTACTGAGTGGAACACGTCACTCAGTGGGGTATGA...GAACTGCATTTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR TCA 90 bp TGGTTTGGTAATCCACCACCACTGCTCCATGATGGTCAGAACCTCTGCTTCTTCCTCAACTGGCCTTTCTaGTTTCACTCTTGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: WFGNPPPLLHDGQNLCFFLNWPF*FHSCLS
Trigger: GGAAAGGCAAGAGTGAAATCAGAAAGGCCAGTTGAG...GAAGAAGCAGAGGTTCTGACCATCATGGAGCAGTGGTGGTGGATTACCAAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR TCA 90 bp AATCCACCACCACTGCTCCATGATGGTCAGAACCTCTGCTTCTTCTTATCTGAAACCACCACTGCTCCATaGTGGTCAGAACCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: NPPPLLHDGQNLCFFLSETTTAP*WSEPLL
Trigger: AAGCAGAGGTTCTGACCATCATGGAGCAGTGGTGGT...TTCAGATAAGAAGAAGCAGAGGTTCTGACCATCATGGAGCAGTGGTGGTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR GCA 90 bp CTGCCTTGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACCCCCACAAGGGCCTTTaGATGCTTTTCAATGGACTC +
Preference number: 4 (lower is better)
Translates to: LPWEGTQTARLSNLLHVHPHKGL*MLFNGL
Trigger: GAGTCCATTGAAAAGCATGCAAAGGCCCTTGTGGGG...GTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCAAGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR GCA 90 bp ACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTCCCCACAAGGGCCTTTaGATGCTTTTCAATGGACTC +
Preference number: 4 (lower is better)
Translates to: TPLSDVFHSVHRDKISTVPHKGL*MLFNGL
Trigger: GAGTCCATTGAAAAGCATGCAAAGGCCCTTGTGGGG...AACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR GCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGTGCACAGTTCCTTGTTaGCTCTGTGGAGGAATTTCA +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWCTVPC*LCGGIS
Trigger: TGAAATTCCTCCACAGAGGCAACAAGGAACTGTGCA...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp ACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTATCAGCCAGGAGATCTaGCTTGGTAATTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TPLSDVFHSVHRDKISTVISQEI*LGNCSQ
Trigger: CTGGCTGCAATTACCAAGGCAGATCTCCTGGCTGAT...AACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR GCA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTAGGAGAGAGCGGTCCCTaGGTTTCTTGGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: WEPFYHVLASVVVREDHVGESGP*VSWPQP
Trigger: AGGCTGTGGCCAAGAAACGCAGGGACCGCTCTCTCC...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGTTTAGCTGGGTCCTCTaGTCAGAGTTTCACAAAGCT +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWFSWVL*SEFHKA
Trigger: AGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAA...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp GTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTTGACACTCTCTGCGTaGTACTCCTCAAAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: VFHTPLSDVFHSVHRDKILTLSA*YSSKAP
Trigger: GGGCGCCTTTGAGGAGTAGCACGCAGAGAGTGTCAA...GATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494677.5
CDS-3UTR GCA 90 bp ACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGGGAGTTACCTCCCAGTaGAACGCTCTGTTTCCGTGC +
Preference number: 4 (lower is better)
Translates to: TCSTQYTEIRSPQLVVEQGVTSQ*NALFPC
Trigger: GCACGGAAACAGAGCGTTGCACTGGGAGGTAACTCC...CTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494677.5
CDS-3UTR CCA 90 bp TTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCTCACTGCAATGGGGATaGCTAATGCCATCACTGGGG +
Preference number: 4 (lower is better)
Translates to: FHTPLSDVFHSVHRDKISSLQWG*LMPSLG
Trigger: CCCCAGTGATGGCATTAGCCATCCCCATTGCAGTGA...GGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CCA 90 bp TACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGTCACTGCAATGGGGATaGCTAATGCCATCACTGGGG +
Preference number: 4 (lower is better)
Translates to: YTEIRSPQLVVEQVTRSTSLQWG*LMPSLG
Trigger: CCCCAGTGATGGCATTAGCCATCCCCATTGCAGTGA...CGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGGGAATTTCACTGCAATaGGGATGGCTAATGCCATCA +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWGISLQ*GWLMPS
Trigger: TGATGGCATTAGCCATCCCCATTGCAGTGAAATTCC...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGATCCATGTTGGCCAGTTaGCTCACCAGGTATGTCAGG +
Preference number: 4 (lower is better)
Translates to: FLAAVELMAACLFKANRRSMLAS*LTRYVR
Trigger: CCTGACATACCTGGTGAGCCAACTGGCCAACATGGA...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCAGAATGACTCTGAATaGACAGGGGTTCAGGAAACA +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWQNDSE*TGVQET
Trigger: TGTTTCCTGAACCCCTGTCCATTCAGAGTCATTCTG...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362010.7
CDS-3UTR CCA 90 bp TGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACAGGTCAAGTTACTCAGCTGCATaGTTTGAGACTGGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: WEGTQTARLSNLLHVHRSSYSAA*FETGRE
Trigger: CTCCCGCCCAGTCTCAAACCATGCAGCTGAGTAACT...TGACCTGTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494677.5
CDS-3UTR CCA 90 bp GTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCGGAGCCGGTGCCGGGTaGAAGAATTCAAGGAATGCA +
Preference number: 4 (lower is better)
Translates to: VFHTPLSDVFHSVHRDKIGAGAG*KNSRNA
Trigger: TGCATTCCTTGAATTCTTCCACCCGGCACCGGCTCC...GATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494677.5
CDS-3UTR CCA 90 bp AGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAAATGCAGTTCGTAATTCATCTGCCTTaGGAAGGGACACAGACAGCC +
Preference number: 4 (lower is better)
Translates to: RSPQLVVEQVTRSTEMQFVIHLP*EGTQTA
Trigger: GGCTGTCTGTGTCCCTTCCCAAGGCAGATGAATTAC...GAACTGCATTTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR TCA 90 bp TTCAACTACTGCCTGGTCATTGTTATTGGTTTGGTAATCCACCACCACTGCTCCGAGGTCCCCAGCTCGTaGAAGATCTTTTTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: FNYCLVIVIGLVIHHHCSEVPSS*KIFLSQ
Trigger: TTGGGACAAAAAGATCTTTCACGAGCTGGGGACCTC...GGAGCAGTGGTGGTGGATTACCAAACCAATAACAATGACCAGGCAGTAGTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR TCA 90 bp CAGGTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGGAGGTCCCCAGCTCGTaGAAGATCTTTTTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: QVFHTPLSDVFHSVHRDKEVPSS*KIFLSQ
Trigger: TTGGGACAAAAAGATCTTTCACGAGCTGGGGACCTC...CTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR TCA 90 bp CAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAAATGCAGTTCTTCAAACTGACTATAACTTCCGTGTaGTCAGCCAGGAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: QLVVEQVTRSTEMQFFKLTITSV*SARRSA
Trigger: GGCAGATCTCCTGGCTGATCACACGGAAGTTATAGT...CAGTTTGAAGAACTGCATTTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR TCA 90 bp TGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACAGGTCAACTATAACTTCCGTGTaGTCAGCCAGGAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: WEGTQTARLSNLLHVHRSTITSV*SARRSA
Trigger: GGCAGATCTCCTGGCTGATCACACGGAAGTTATAGT...TGACCTGTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR TCA 90 bp ACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAAACTATAACTTCCGTGTaGTCAGCCAGGAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: TEIRSPQLVVEQVTRSTETITSV*SARRSA
Trigger: GGCAGATCTCCTGGCTGATCACACGGAAGTTATAGT...TTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCTTATCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR TCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCTTGCCATCTGTCCAGTaGGGTAGGGGAATCTCTCAC +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGLPSVQ*GRGISH
Trigger: GTGAGAGATTCCCCTACCTCACTGGACAGATGGCAA...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGAATCTGGATCCATGGCTaGGGTTCTTGGCTGATGAGA +
Preference number: 4 (lower is better)
Translates to: FLAAVELMAACLFKANRRIWIHG*GSWLMR
Trigger: TCTCATCAGCCAAGAACCTCAGCCATGGATCCAGAT...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGAGGCTGGGCTTTTATCTaGGGTTCAGATGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: FLAAVELMAACLFKANRRGWAFI*GSDASS
Trigger: GGAAGAAGCATCTGAACCTCAGATAAAAGCCCAGCC...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGTTGACACTCTCTCTTTaGACAGGAATCTCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWLTLSL*TGISGH
Trigger: ATGACCAGAGATTCCTGTGCAAAGAGAGAGTGTCAA...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp CATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAACAAGGGCCTTTGCATaGTTTTCAATGGACTCGGTC +
Preference number: 4 (lower is better)
Translates to: HTPLSDVFHSVHRDKISTTRAFA*FSMDSV
Trigger: GACCGAGTCCATTGAAAAGCATGCAAAGGCCCTTGT...TGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR GCA 90 bp CTGCCTGGTCATTGTTATTGGTTTGGTAATCCACCACCACTGCTCCATGATGGTACAAGGGCCTTTGCATaGTTTTCAATGGACTCGGTC +
Preference number: 4 (lower is better)
Translates to: LPGHCYWFGNPPPLLHDGTRAFA*FSMDSV
Trigger: GACCGAGTCCATTGAAAAGCATGCAAAGGCCCTTGT...ACCATCATGGAGCAGTGGTGGTGGATTACCAAACCAATAACAATGACCAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473907.5
CDS-3UTR GCA 90 bp TACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGCCCCACAAGGGCCTTTaGATGCTTTTCAATGGACTC +
Preference number: 4 (lower is better)
Translates to: YTEIRSPQLVVEQVTRSTPHKGL*MLFNGL
Trigger: GAGTCCATTGAAAAGCATGCAAAGGCCCTTGTGGGG...CGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR GCA 90 bp TTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCATCAGCCAGGAGATCTaGCTTGGTAATTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: FHTPLSDVFHSVHRDKISISQEI*LGNCSQ
Trigger: CTGGCTGCAATTACCAAGGCAGATCTCCTGGCTGAT...GGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR GCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTGCTGTGAGCACCCCCTaGCTGGGTCTTCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAAVSTP*LGLLPQ
Trigger: CTGTGGGAGAAGACCCAGGCAGGGGGTGCTCACAGC...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392832.6
CDS-3UTR GCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCGCTGTGAGCACCCCCTaGCTGGGTCTTCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGAVSTP*LGLLPQ
Trigger: CTGTGGGAGAAGACCCAGGCAGGGGGTGCTCACAGC...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392832.6
CDS-3UTR GCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCTTTGGCTTGGGCAACTaGCACGTTGATGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGFGLGN*HVDALE
Trigger: CTCCAGTGCATCAACGTGGCAGTTGCCCAAGCCAAA...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp TTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCGAAGAATTCAAGGAATaGAGCCTGATGCCACCGGCA +
Preference number: 4 (lower is better)
Translates to: FHTPLSDVFHSVHRDKISEEFKE*SLMPPA
Trigger: TGCCGGTGGCATCAGGCTGCATTCCTTGAATTCTTC...GGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494677.5
CDS-3UTR GCA 90 bp GGTTTGGTAATCCACCACCACTGCTCCATGATGGTCAGAACCTCTGCTTCTTCTACATATTCGCATCATTaGAAGTGCAGGAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: GLVIHHHCSMMVRTSASSTYSHH*KCRRSH
Trigger: GTGGCTTCTCCTGCACTTGCAATGATGCGAATATGT...AGAAGAAGCAGAGGTTCTGACCATCATGGAGCAGTGGTGGTGGATTACCAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473907.5
CDS-3UTR GCA 90 bp CTGCCTTGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACAACGCTCTGTTTCCGTaGGGAATCAGGCAAATGAGT +
Preference number: 4 (lower is better)
Translates to: LPWEGTQTARLSNLLHVHNALFP*GIRQMS
Trigger: ACTCATTTGCCTGATTCCGCACGGAAACAGAGCGTT...GTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCAAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494677.5
CDS-3UTR CCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCTCACTGCAATGGGGATaGCTAATGCCATCACTGGGG +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGSLQWG*LMPSLG
Trigger: CCCCAGTGATGGCATTAGCCATCCCCATTGCAGTGA...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGAATGTCAGGCAGCTCCTaGCTCTCTCTTCATCCACAT +
Preference number: 4 (lower is better)
Translates to: FLAAVELMAACLFKANRRMSGSS*LSLHPH
Trigger: ATGTGGATGAAGAGAGAGCCAGGAGCTGCCTGACAT...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGATGCCACTTCCAGCCTTaGTATTTTCCAGTTGTCGGG +
Preference number: 4 (lower is better)
Translates to: FLAAVELMAACLFKANRRCHFQP*YFPVVG
Trigger: CCCGACAACTGGAAAATACCAAGGCTGGAAGTGGCA...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTCGAGGGCACAGCGAGTaGAATCCGCTCAGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIRGHSE*NPLSSV
Trigger: CACTGAGCTGAGCGGATTCCACTCGCTGTGCCCTCG...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392832.6
CDS-3UTR CCA 90 bp TACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGTAATTCATCTGCCTTaGGAAGGGACACAGACAGCC +
Preference number: 4 (lower is better)
Translates to: YTEIRSPQLVVEQVTRSTVIHLP*EGTQTA
Trigger: GGCTGTCTGTGTCCCTTCCCAAGGCAGATGAATTAC...CGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR CCA 90 bp TGGTTTGGTAATCCACCACCACTGCTCCATGATGGTCAGAACCTCTGCTTCTTCTTCTGTGCTGGAAGTTaGAAGGGGCAATTTAGACGA +
Preference number: 4 (lower is better)
Translates to: WFGNPPPLLHDGQNLCFFFCAGS*KGQFRR
Trigger: TCGTCTAAATTGCCCCTTCCAACTTCCAGCACAGAA...GAAGAAGCAGAGGTTCTGACCATCATGGAGCAGTGGTGGTGGATTACCAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473907.5
CDS-3UTR TCA 90 bp GGTTTGGTAATCCACCACCACTGCTCCATGATGGTCAGAACCTCTGCTTCTTCTATGAGTTTGATCAGTTaGCTTTCTACAGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: GLVIHHHCSMMVRTSASSMSLIS*LSTDPE
Trigger: CTCTGGGTCTGTAGAAAGTCAACTGATCAAACTCAT...AGAAGAAGCAGAGGTTCTGACCATCATGGAGCAGTGGTGGTGGATTACCAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR TCA 90 bp TACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGACCAGTCTGAACAGTTaGTGCATGGTGAGGATGAGT +
Preference number: 4 (lower is better)
Translates to: YTEIRSPQLVVEQVTRSTTSLNS*CMVRMS
Trigger: ACTCATCCTCACCATGCATCAACTGTTCAGACTGGT...CGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR TCA 90 bp CTGGTCATTGTTATTGGTTTGGTAATCCACCACCACTGCTCCATGATGGTCAGAACCAGTCTGAACAGTTaGTGCATGGTGAGGATGAGT +
Preference number: 4 (lower is better)
Translates to: LVIVIGLVIHHHCSMMVRTSLNS*CMVRMS
Trigger: ACTCATCCTCACCATGCATCAACTGTTCAGACTGGT...TCTGACCATCATGGAGCAGTGGTGGTGGATTACCAAACCAATAACAATGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR TCA 90 bp CAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAAATGCAGTTCTTCAAACTGACCAGTCTGAACAGTTaGTGCATGGTGAGGATGAGT +
Preference number: 4 (lower is better)
Translates to: QLVVEQVTRSTEMQFFKLTSLNS*CMVRMS
Trigger: ACTCATCCTCACCATGCATCAACTGTTCAGACTGGT...CAGTTTGAAGAACTGCATTTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR TCA 90 bp ACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTGATGCGATTTTTGCATaGGGAGTGTCTTCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: TPLSDVFHSVHRDKISTVDAIFA*GVSSSF
Trigger: GAAAGACGAAGACACTCCTCATGCAAAAATCGCATC...AACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR TCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCACTATAACTTCCGTGTaGTCAGCCAGGAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGTITSV*SARRSA
Trigger: GGCAGATCTCCTGGCTGATCACACGGAAGTTATAGT...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTATCTGGCTGTTCCAGCTaGGACATCAAGGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: WEPFYHVLASVVVREDHVSGCSS*DIKARS
Trigger: ACTCCTGGCCTTGATGTCTCAGCTGGAACAGCCAGA...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGGATGTCATTATGGGTTaGATCCTTCAAATGCCCAAT +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWDVIMG*ILQMPN
Trigger: ATTGGGCATTTGAAGGATTCAACCCATAATGACATC...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCTCTCCCACAGAGCTCTaGGGAATTGCACAGAATGAC +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGSPTEL*GIAQND
Trigger: GTCATTCTGTGCAATTCCTCAGAGCTCTGTGGGAGA...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362010.7
CDS-3UTR TCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCCAGGATTGTTGCACATaGAGCATTGCCATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGQDCCT*SIAMLL
Trigger: CAGGAGCATGGCAATGCTTCATGTGCAACAATCCTG...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp TGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACAGGTCATTTTTCATACCCCACTaGGTGACGTGTTCCACTCAG +
Preference number: 4 (lower is better)
Translates to: WEGTQTARLSNLLHVHRSFFIPH*VTCSTQ
Trigger: CTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAA...TGACCTGTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR TCA 90 bp ACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAATTTTTCATACCCCACTaGGTGACGTGTTCCACTCAG +
Preference number: 4 (lower is better)
Translates to: TEIRSPQLVVEQVTRSTEFFIPH*VTCSTQ
Trigger: CTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAA...TTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCTTATCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR TCA 90 bp CAGGTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGTTTTTCATACCCCACTaGGTGACGTGTTCCACTCAG +
Preference number: 4 (lower is better)
Translates to: QVFHTPLSDVFHSVHRDKFFIPH*VTCSTQ
Trigger: CTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAA...CTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR TCA 90 bp ATCCACCACCACTGCTCCATGATGGTCAGAACCTCTGCTTCTTCTTATCTGAATCTCAACTGGCCTTTCTaGTTTCACTCTTGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: IHHHCSMMVRTSASSYLNLNWPF*FHSCLS
Trigger: GGAAAGGCAAGAGTGAAATCAGAAAGGCCAGTTGAG...ATTCAGATAAGAAGAAGCAGAGGTTCTGACCATCATGGAGCAGTGGTGGTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR GCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCCCCCACAAGGGCCTTTaGATGCTTTTCAATGGACTC +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGPHKGL*MLFNGL
Trigger: GAGTCCATTGAAAAGCATGCAAAGGCCCTTGTGGGG...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp CATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACATGCACAGTTCCTTGTTaGCTCTGTGGAGGAATTTCA +
Preference number: 4 (lower is better)
Translates to: HTPLSDVFHSVHRDKISTCTVPC*LCGGIS
Trigger: TGAAATTCCTCCACAGAGGCAACAAGGAACTGTGCA...TGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR GCA 90 bp CTGCCTTGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACATCTGCCTTGGTAATTaGAGCCAGAGACAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: LPWEGTQTARLSNLLHVHICLGN*SQRQVV
Trigger: AACTACCTGTCTCTGGCTGCAATTACCAAGGCAGAT...GTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCAAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR GCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCATCAGCCAGGAGATCTaGCTTGGTAATTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGISQEI*LGNCSQ
Trigger: CTGGCTGCAATTACCAAGGCAGATCTCCTGGCTGAT...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp ACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGATCAGCCAGGAGATCTaGCTTGGTAATTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TCSTQYTEIRSPQLVVEQISQEI*LGNCSQ
Trigger: CTGGCTGCAATTACCAAGGCAGATCTCCTGGCTGAT...CTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR GCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGGGTGAAGAACAACTTTaGTACACAACTTCTCACAGT +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWGEEQL*YTTSHS
Trigger: ACTGTGAGAAGTTGTGTAGCAAAGTTGTTCTTCACC...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCGGAGAGAGCGGTCCCTaGGTTTCTTGGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGGESGP*VSWPQP
Trigger: AGGCTGTGGCCAAGAAACGCAGGGACCGCTCTCTCC...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTGGAGAGAGCGGTCCCTaGGTTTCTTGGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAGESGP*VSWPQP
Trigger: AGGCTGTGGCCAAGAAACGCAGGGACCGCTCTCTCC...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCAGAGTTTCACAAAGCTaGAAGCAAGGCGTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGRVSQS*KQGVGW
Trigger: CCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCT...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp CATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACATCATTGACACTCTCGTaGGGAATCAGGCAAATGAGT +
Preference number: 4 (lower is better)
Translates to: HTPLSDVFHSVHRDKISTSLTLS*GIRQMS
Trigger: ACTCATTTGCCTGATTCCGCACGAGAGTGTCAATGA...TGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468233.5
CDS-3UTR CCA 90 bp AGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAAATGCAGTTCGGAATTTCACTGCAATaGGGATGGCTAATGCCATCA +
Preference number: 4 (lower is better)
Translates to: RSPQLVVEQVTRSTEMQFGISLQ*GWLMPS
Trigger: TGATGGCATTAGCCATCCCCATTGCAGTGAAATTCC...GAACTGCATTTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCAGGTGTCTATTAATTaGCTGAGGCTGCTTTTCATA +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWQVSIN*LRLLFI
Trigger: TATGAAAAGCAGCCTCAGCCAATTAATAGACACCTG...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGACAGATCCTTCTGCTGTaGAAACGTGGACTCCATCAT +
Preference number: 4 (lower is better)
Translates to: FLAAVELMAACLFKANRRQILLL*KRGLHH
Trigger: ATGATGGAGTCCACGTTTCCACAGCAGAAGGATCTG...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362010.7
CDS-3UTR CCA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTACTGCAAGCAAGGCGTTaGCTGGGGCTGGGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: WEPFYHVLASVVVREDHVLQARR*LGLGFY
Trigger: ATAAAAGCCCAGCCCCAGCCAACGCCTTGCTTGCAG...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
3UTR CAA 72 bp TGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTaGCATGTTCACAGGTCAACTGGCAGCAAAACAGAG +
Preference number: 4 (lower is better)
Translates to: WEGTQTARLSNL*HVHRSTGSKTE
Trigger: CTCTGTTTTGCTGCCAGTTGACCTGTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR TCA 90 bp ATTGTTATTGGTTTGGTAATCCACCACCACTGCTCCATGATGGTCAGAACCTCTACCAGTCTGAACAGTTaGTGCATGGTGAGGATGAGT +
Preference number: 4 (lower is better)
Translates to: IVIGLVIHHHCSMMVRTSTSLNS*CMVRMS
Trigger: ACTCATCCTCACCATGCATCAACTGTTCAGACTGGT...AGAGGTTCTGACCATCATGGAGCAGTGGTGGTGGATTACCAAACCAATAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR TCA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGAGATGCGATTTTTGCATaGGGAGTGTCTTCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: FLAAVELMAACLFKANRRDAIFA*GVSSSF
Trigger: GAAAGACGAAGACACTCCTCATGCAAAAATCGCATC...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp TGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACAGGTCAGATGCGATTTTTGCATaGGGAGTGTCTTCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: WEGTQTARLSNLLHVHRSDAIFA*GVSSSF
Trigger: GAAAGACGAAGACACTCCTCATGCAAAAATCGCATC...TGACCTGTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR TCA 90 bp CAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAAATGCAGTTCTTCAAACTGGATGCGATTTTTGCATaGGGAGTGTCTTCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: QLVVEQVTRSTEMQFFKLDAIFA*GVSSSF
Trigger: GAAAGACGAAGACACTCCTCATGCAAAAATCGCATC...CAGTTTGAAGAACTGCATTTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR TCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTCTGAGGGCCCAAGATTaGGGAGAAGGTGTCGGTGAT +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGILRAQD*GEGVGD
Trigger: ATCACCGACACCTTCTCCTCAATCTTGGGCCCTCAG...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTAAAGATGTCTCTGCTCTaGGGGCCCAAGATTGAGGAG +
Preference number: 4 (lower is better)
Translates to: WEPFYHVLASVVVREDHVKMSLL*GPKIEE
Trigger: CTCCTCAATCTTGGGCCCTCAGAGCAGAGACATCTT...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTAATCTTCGCCGTCATCTaGACCCACACCCTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: WEPFYHVLASVVVREDHVIFAVI*THTLCE
Trigger: CTCACAAAGGGTGTGGGTTCAGATGACGGCGAAGAT...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTGGGCAACTGCCACGTTaGTGCACTGGAGCCATTCTT +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIGQLPR*CTGAIL
Trigger: AAGAATGGCTCCAGTGCATCAACGTGGCAGTTGCCC...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCATACATTTATTATCTaGAAGTTTCTGTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWHTFII*KFLWVR
Trigger: CCTGACCCACAGAAACTTTCAGATAATAAATGTATG...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTCTCAGCTGCATGGTTTaGGACTGGGCGGGAGATTCA +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGILSCMV*DWAGDS
Trigger: TGAATCTCCCGCCCAGTCTCAAACCATGCAGCTGAG...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392832.6
CDS-3UTR GCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCACAAGGGCCTTTGCATaGTTTTCAATGGACTCGGTC +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGTRAFA*FSMDSV
Trigger: GACCGAGTCCATTGAAAAGCATGCAAAGGCCCTTGT...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp GTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCACAAGGGCCTTTGCATaGTTTTCAATGGACTCGGTC +
Preference number: 4 (lower is better)
Translates to: VFHTPLSDVFHSVHRDKITRAFA*FSMDSV
Trigger: GACCGAGTCCATTGAAAAGCATGCAAAGGCCCTTGT...GATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR GCA 90 bp ACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAATGCACAGTTCCTTGTTaGCTCTGTGGAGGAATTTCA +
Preference number: 4 (lower is better)
Translates to: TEIRSPQLVVEQVTRSTECTVPC*LCGGIS
Trigger: TGAAATTCCTCCACAGAGGCAACAAGGAACTGTGCA...TTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCTTATCTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR GCA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGAATCTGCCTTGGTAATTaGAGCCAGAGACAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: FLAAVELMAACLFKANRRICLGN*SQRQVV
Trigger: AACTACCTGTCTCTGGCTGCAATTACCAAGGCAGAT...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp TTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCATCTGCCTTGGTAATTaGAGCCAGAGACAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: FHTPLSDVFHSVHRDKISICLGN*SQRQVV
Trigger: AACTACCTGTCTCTGGCTGCAATTACCAAGGCAGAT...GGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR GCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCCTGAAGTTGTTCATTaGGGAGCCGGTGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCPEVVH*GAGAGW
Trigger: CCACCCGGCACCGGCTCCGCAATGAACAACTTCAGG...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392832.6
CDS-3UTR GCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTTTGACACTCTCTGCGTaGTACTCCTCAAAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGILTLSA*YSSKAP
Trigger: GGGCGCCTTTGAGGAGTAGCACGCAGAGAGTGTCAA...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392832.6
CDS-3UTR GCA 90 bp TACTGCCTGGTCATTGTTATTGGTTTGGTAATCCACCACCACTGCTCCATGATGTCGCATCATTGCAAGTaGAGGAGAAGCCACCTATTT +
Preference number: 4 (lower is better)
Translates to: YCLVIVIGLVIHHHCSMMSHHCK*RRSHLF
Trigger: AAATAGGTGGCTTCTCCTGCACTTGCAATGATGCGA...CATCATGGAGCAGTGGTGGTGGATTACCAAACCAATAACAATGACCAGGCAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473907.5
CDS-3UTR GCA 90 bp ACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAACCAGAAGCACGGAAATaGAGTTCTTCAAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: TEIRSPQLVVEQVTRSTEPEARK*SSSNLE
Trigger: CTCCAAGTTTGAAGAACTGCATTTCCGTGCTTCTGG...TTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCTTATCTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537559.5
CDS-3UTR CCA 90 bp TACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGGAATTTCACTGCAATaGGGATGGCTAATGCCATCA +
Preference number: 4 (lower is better)
Translates to: YTEIRSPQLVVEQVTRSTGISLQ*GWLMPS
Trigger: TGATGGCATTAGCCATCCCCATTGCAGTGAAATTCC...CGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CCA 90 bp TTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCGGAATTTCACTGCAATaGGGATGGCTAATGCCATCA +
Preference number: 4 (lower is better)
Translates to: FHTPLSDVFHSVHRDKISGISLQ*GWLMPS
Trigger: TGATGGCATTAGCCATCCCCATTGCAGTGAAATTCC...GGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCAAGAGAGATGCTGGCTaGTATGTCTCCCCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGKRDAG*YVSPVF
Trigger: GAAAACAGGGGAGACATACCAGCCAGCATCTCTCTT...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGTCTGGAGTTTCTTCCTaGGAGTTTTCTTTAACAGTT +
Preference number: 4 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWSGVSS*EFSLTV
Trigger: AACTGTTAAAGAAAACTCCCAGGAAGAAACTCCAGA...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCACGTGGACTCCATCATaGCAGTTTCAAAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGTWTPS*QFQSCE
Trigger: CTCACAGCTTTGAAACTGCCATGATGGAGTCCACGT...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362010.7
CDS-3UTR CCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCTTTGCTGAGTTCTATTaGGCAGTCGTCAGGGTCATC +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGFAEFY*AVVRVI
Trigger: GATGACCCTGACGACTGCCCAATAGAACTCAGCAAA...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTGGTCCCTGCGTTTCTTaGCCACAGCCTTCACACTCT +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIGPCVS*PQPSHS
Trigger: AGAGTGTGAAGGCTGTGGCCAAGAAACGCAGGGACC...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
3UTR CAA 72 bp TGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTaGGTAGTTGAACAGGTGACCAGAAGCACGGAAATG +
Preference number: 4 (lower is better)
Translates to: CSTQYTEIRSPQ*VVEQVTRSTEM
Trigger: CATTTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR TCA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGAATGAGTTTGATCAGTTaGCTTTCTACAGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: FLAAVELMAACLFKANRRMSLIS*LSTDPE
Trigger: CTCTGGGTCTGTAGAAAGTCAACTGATCAAACTCAT...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp CAGGTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATGAGTTTGATCAGTTaGCTTTCTACAGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: QVFHTPLSDVFHSVHRDKMSLIS*LSTDPE
Trigger: CTCTGGGTCTGTAGAAAGTCAACTGATCAAACTCAT...CTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR TCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTCTGGCTGTTCCAGCTaGGACATCAAGGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGSGCSS*DIKARS
Trigger: ACTCCTGGCCTTGATGTCTCAGCTGGAACAGCCAGA...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTTTGCCATCTGTCCAGTaGGGTAGGGGAATCTCTCAC +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGILPSVQ*GRGISH
Trigger: GTGAGAGATTCCCCTACCTCACTGGACAGATGGCAA...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCAGCAGGAGAATATGGTaGAACGAATGCTCCATGTTG +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGSRRIW*NECSML
Trigger: CAACATGGAGCATTCGTTTCACCATATTCTCCTGCT...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTCTGAGGGCCCAAGATTaGGGAGAAGGTGTCGGTGAT +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMALRAQD*GEGVGD
Trigger: ATCACCGACACCTTCTCCTCAATCTTGGGCCCTCAG...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTATCTTCGCCGTCATCTaGACCCACACCCTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIIFAVI*THTLCE
Trigger: CTCACAAAGGGTGTGGGTTCAGATGACGGCGAAGAT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTAGACTCCCCCAGCTGTaGTCTCTCAGTGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIRLPQL*SLSVCL
Trigger: AAGACAGACACTGAGAGATCACAGCTGGGGGAGTCT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCAGGTTTTATTGTCTGTaGAGATTTCGAAAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGRFYCL*RFRKPG
Trigger: CCCGGGCTTTCGAAATCTTCACAGACAATAAAACCT...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCTGGTCCAGATCCTGCTaGAATAGAAACATGATCTGG +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGWSRSC*NRNMIW
Trigger: CCAGATCATGTTTCTATTTCAGCAGGATCTGGACCA...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392833.6
CDS-3UTR GCA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGAATCAGATGCGATTTTTaGATGAGGAGTGTCTTCGTC +
Preference number: 4 (lower is better)
Translates to: FLAAVELMAACLFKANRRIRCDF*MRSVFV
Trigger: GACGAAGACACTCCTCATGCAAAAATCGCATCTGAT...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp TGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACAGGTCAATCAGATGCGATTTTTaGATGAGGAGTGTCTTCGTC +
Preference number: 4 (lower is better)
Translates to: WEGTQTARLSNLLHVHRSIRCDF*MRSVFV
Trigger: GACGAAGACACTCCTCATGCAAAAATCGCATCTGAT...TGACCTGTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR GCA 90 bp ACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAAATCAGATGCGATTTTTaGATGAGGAGTGTCTTCGTC +
Preference number: 4 (lower is better)
Translates to: TEIRSPQLVVEQVTRSTEIRCDF*MRSVFV
Trigger: GACGAAGACACTCCTCATGCAAAAATCGCATCTGAT...TTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCTTATCTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR GCA 90 bp GTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTGCACAGTTCCTTGTTaGCTCTGTGGAGGAATTTCA +
Preference number: 4 (lower is better)
Translates to: VFHTPLSDVFHSVHRDKICTVPC*LCGGIS
Trigger: TGAAATTCCTCCACAGAGGCAACAAGGAACTGTGCA...GATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR GCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCCCTCAAAGGCGCCCTTaGAGTTACTCAGCTGCATGG +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGPQRRP*SYSAAW
Trigger: CCATGCAGCTGAGTAACTGCAAGGGCGCCTTTGAGG...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392832.6
CDS-3UTR CCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCGGAATTTCACTGCAATaGGGATGGCTAATGCCATCA +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGGISLQ*GWLMPS
Trigger: TGATGGCATTAGCCATCCCCATTGCAGTGAAATTCC...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCAAAAGCCGTAGTAGATaGTACTGTTCTGGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGKSRSR*YCSGCS
Trigger: GGAACAGCCAGAACAGTACCATCTACTACGGCTTTT...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTACGAATGCTCCATGTTaGCCAGTTGGCTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGITNAPC*PVGSPG
Trigger: ACCTGGTGAGCCAACTGGCCAACATGGAGCATTCGT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCACTTGCAGTTGTCTCTaGAGTTTCTTCCTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGTCSCL*SFFLGV
Trigger: AACTCCCAGGAAGAAACTCCAGAGACAACTGCAAGT...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTGGTCCCTGCGTTTCTTaGCCACAGCCTTCACACTCT +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAGPCVS*PQPSHS
Trigger: AGAGTGTGAAGGCTGTGGCCAAGAAACGCAGGGACC...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCGGTCCCTGCGTTTCTTaGCCACAGCCTTCACACTCT +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGGPCVS*PQPSHS
Trigger: AGAGTGTGAAGGCTGTGGCCAAGAAACGCAGGGACC...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTAGCCACGTTGATGCACTaGAGCCATTCTTCTGCATTC +
Preference number: 4 (lower is better)
Translates to: WEPFYHVLASVVVREDHVATLMH*SHSSAF
Trigger: GAATGCAGAAGAATGGCTCCAGTGCATCAACGTGGC...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGATTACACTTAGTGCCTTaGGCAGGATATATGTCCAAG +
Preference number: 4 (lower is better)
Translates to: FLAAVELMAACLFKANRRLHLVP*AGYMSK
Trigger: CTTGGACATATATCCTGCCCAAGGCACTAAGTGTAA...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCCTGCAAGCAAGGCGTTaGCTGGGGCTGGGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGLQARR*LGLGFY
Trigger: ATAAAAGCCCAGCCCCAGCCAACGCCTTGCTTGCAG...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTAGTTACTCAGCTGCATaGTTTGAGACTGGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGISYSAA*FETGRE
Trigger: CTCCCGCCCAGTCTCAAACCATGCAGCTGAGTAACT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392832.6
CDS-3UTR CCA 90 bp ATCCACCACCACTGCTCCATGATGGTCAGAACCTCTGCTTCTTCTTATCTGAATCCTGGTCATTGTTATTaGTTTGGTAATCCACCACCA +
Preference number: 4 (lower is better)
Translates to: IHHHCSMMVRTSASSYLNPGHCY*FGNPPP
Trigger: TGGTGGTGGATTACCAAACCAATAACAATGACCAGG...ATTCAGATAAGAAGAAGCAGAGGTTCTGACCATCATGGAGCAGTGGTGGTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
3UTR CAA 72 bp TCAGTAGCCACTCAACTGGCCTTTCTGATTTCACTCTaGCCTTTCCACAGACATATTCGCATCATTGCAAGT +
Preference number: 4 (lower is better)
Translates to: SVATQLAFLISL*PFHRHIRIIAS
Trigger: ACTTGCAATGATGCGAATATGTCTGTGGAAAGGCAAGAGTGAAATCAGAAAGGCCAGTTGAGTGGCTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473907.5
3UTR CAA 72 bp ACAGATTTCAACTACTGCCTGGTCATTGTTATTGGTTaGGTAATCCACCACCACTGCTCCATGATGGTCAGA +
Preference number: 4 (lower is better)
Translates to: TDFNYCLVIVIG*VIHHHCSMMVR
Trigger: TCTGACCATCATGGAGCAGTGGTGGTGGATTACCAAACCAATAACAATGACCAGGCAGTAGTTGAAATCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR TCA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGATGTCTATTAATTGGCTaGGGCTGCTTTTCATACACA +
Preference number: 4 (lower is better)
Translates to: FLAAVELMAACLFKANRRCLLIG*GCFSYT
Trigger: TGTGTATGAAAAGCAGCCTCAGCCAATTAATAGACA...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTCAGGATTGTTGCACATaGAGCATTGCCATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIQDCCT*SIAMLL
Trigger: CAGGAGCATGGCAATGCTTCATGTGCAACAATCCTG...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTGGCTGGGCTTTTATCTaGGGTTCAGATGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIGWAFI*GSDASS
Trigger: GGAAGAAGCATCTGAACCTCAGATAAAAGCCCAGCC...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp GTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCATCAGATGCGATTTTTaGATGAGGAGTGTCTTCGTC +
Preference number: 4 (lower is better)
Translates to: VFHTPLSDVFHSVHRDKIIRCDF*MRSVFV
Trigger: GACGAAGACACTCCTCATGCAAAAATCGCATCTGAT...GATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR GCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCTTCTTTGCTGCTACATaGAAAAGCCGTAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGFFAAT*KSRSRW
Trigger: CCATCTACTACGGCTTTTGCATGTAGCAGCAAAGAA...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCGAGCTCATGGCAGCTTaGTTATTTAAGGCTAATAGG +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGELMAA*LFKANR
Trigger: CCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTC...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp TGTTATTGGTTTGGTAATCCACCACCACTGCTCCATGATGGTCAGAACCTCTGCGATGGTCAGAACCTCTaGTTCTTCTTATCTGAATTA +
Preference number: 4 (lower is better)
Translates to: CYWFGNPPPLLHDGQNLCDGQNL*FFLSEL
Trigger: TAATTCAGATAAGAAGAAGCAGAGGTTCTGACCATC...GCAGAGGTTCTGACCATCATGGAGCAGTGGTGGTGGATTACCAAACCAATAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR CCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTTCACTGCAATGGGGATaGCTAATGCCATCACTGGGG +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMASLQWG*LMPSLG
Trigger: CCCCAGTGATGGCATTAGCCATCCCCATTGCAGTGA...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTATGTCAGGCAGCTCCTaGCTCTCTCTTCATCCACAT +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIMSGSS*LSLHPH
Trigger: ATGTGGATGAAGAGAGAGCCAGGAGCTGCCTGACAT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTTCCATGTTGGCCAGTTaGCTCACCAGGTATGTCAGG +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMASMLAS*LTRYVR
Trigger: CCTGACATACCTGGTGAGCCAACTGGCCAACATGGA...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTCCATGTTGGCCAGTTaGCTCACCAGGTATGTCAGG +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGSMLAS*LTRYVR
Trigger: CCTGACATACCTGGTGAGCCAACTGGCCAACATGGA...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGTCATTTCCTTaGCCAAGTGGGTCTATTTCT +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGSLSFP*PSGSIS
Trigger: AGAAATAGACCCACTTGGCCAAGGAAATGACAAGCT...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTAGATGGAGCTGTACCTaGTCCAGATCCTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIRWSCT*SRSFCC
Trigger: ACAGCAGAAGGATCTGGACCAGGTACAGCTCCATCT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392832.6
CDS-3UTR CCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTGCCACGTTGATGCACTaGAGCCATTCTTCTGCATTC +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIATLMH*SHSSAF
Trigger: GAATGCAGAAGAATGGCTCCAGTGCATCAACGTGGC...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTGGTAATCCACCACCACTGCTCCATGATGGTCAGAACCTCTGCTTCTTCTTATCAGACTTCTAAATGGTaGATTCCTCCCTGTTTAGTT +
Preference number: 4 (lower is better)
Translates to: LVIHHHCSMMVRTSASSYQTSKW*IPPCLV
Trigger: AACTAAACAGGGAGGAATCCACCATTTAGAAGTCTG...ATAAGAAGAAGCAGAGGTTCTGACCATCATGGAGCAGTGGTGGTGGATTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR CCA 90 bp ACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTTTTCGCACCATACCTTaGAGTATGCTCTTTACTATA +
Preference number: 4 (lower is better)
Translates to: TPLSDVFHSVHRDKISTVFRTIP*SMLFTI
Trigger: TATAGTAAAGAGCATACTCCAAGGTATGGTGCGAAA...AACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR TCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTACCAGTCTGAACAGTTaGTGCATGGTGAGGATGAGT +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGITSLNS*CMVRMS
Trigger: ACTCATCCTCACCATGCATCAACTGTTCAGACTGGT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTGAGGTCCCCAGCTCGTaGAAGATCTTTTTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAEVPSS*KIFLSQ
Trigger: TTGGGACAAAAAGATCTTTCACGAGCTGGGGACCTC...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp GTTGTGATTCTTGTGATACAGATTTCAACTACTGCCTGGTCATTGTTATTGGTTGAGGTCCCCAGCTCGTaGAAGATCTTTTTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: VVILVIQISTTAWSLLLVEVPSS*KIFLSQ
Trigger: TTGGGACAAAAAGATCTTTCACGAGCTGGGGACCTC...AACCAATAACAATGACCAGGCAGTAGTTGAAATCTGTATCACAAGAATCACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR TCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTACTATAACTTCCGTGTaGTCAGCCAGGAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMATITSV*SARRSA
Trigger: GGCAGATCTCCTGGCTGATCACACGGAAGTTATAGT...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGAAAAGGAATACACTTCTaGACTACCTCGAGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: FLAAVELMAACLFKANRRKGIHF*TTSSCF
Trigger: AAAACAACTCGAGGTAGTTCAGAAGTGTATTCCTTT...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTTTGCCATCTGTCCAGTaGGGTAGGGGAATCTCTCAC +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCLPSVQ*GRGISH
Trigger: GTGAGAGATTCCCCTACCTCACTGGACAGATGGCAA...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTAAGATGTCTCTGCTCTaGGGGCCCAAGATTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCKMSLL*GPKIEE
Trigger: CTCCTCAATCTTGGGCCCTCAGAGCAGAGACATCTT...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTAAGTGGGTCTATTTCTaGAAGAGAGATGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIKWVYF*KRDAGW
Trigger: CCAGCCAGCATCTCTCTTTCAGAAATAGACCCACTT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCCCTTCAGGGAGCAGGTaGAGAACAACTTTGCTACAC +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGPSGSR*RTTLLH
Trigger: GTGTAGCAAAGTTGTTCTTCACCTGCTCCCTGAAGG...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCATCTGGATCCATGGCTaGGGTTCTTGGCTGATGAGA +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGIWIHG*GSWLMR
Trigger: TCTCATCAGCCAAGAACCTCAGCCATGGATCCAGAT...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTAGCTGAAATAGAAACATaGTCTGGATCCATGGCTGAG +
Preference number: 4 (lower is better)
Translates to: WEPFYHVLASVVVREDHVAEIET*SGSMAE
Trigger: CTCAGCCATGGATCCAGATCATGTTTCTATTTCAGC...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTCTCCCACAGAGCTCTaGGGAATTGCACAGAATGAC +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGSPTEL*GIAQND
Trigger: GTCATTCTGTGCAATTCCTCAGAGCTCTGTGGGAGA...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392832.6
CDS-3UTR TCA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTAAGAGGCTGGCCATCTTaGTTTACAACAGTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: WEPFYHVLASVVVREDHVRGWPS*FTTVAF
Trigger: GAAAGCAACTGTTGTAAATCAAGATGGCCAGCCTCT...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp TACTGCCTGGTCATTGTTATTGGTTTGGTAATCCACCACCACTGCTCCATGATGCTGCTTCTTCTTATCTaGATTATTTCAGTAGCCACT +
Preference number: 4 (lower is better)
Translates to: YCLVIVIGLVIHHHCSMMLLLLI*IISVAT
Trigger: AGTGGCTACTGAAATAATTCAGATAAGAAGAAGCAG...CATCATGGAGCAGTGGTGGTGGATTACCAAACCAATAACAATGACCAGGCAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR GCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTACAAGGGCCTTTGCATaGTTTTCAATGGACTCGGTC +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGITRAFA*FSMDSV
Trigger: GACCGAGTCCATTGAAAAGCATGCAAAGGCCCTTGT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTCCCCACAAGGGCCTTTaGATGCTTTTCAATGGACTC +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAPHKGL*MLFNGL
Trigger: GAGTCCATTGAAAAGCATGCAAAGGCCCTTGTGGGG...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp TGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACAGGTCAACTCATGATATCAGATaGGATTTTTGCATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: WEGTQTARLSNLLHVHRSTHDIR*DFCMRS
Trigger: ACTCCTCATGCAAAAATCGCATCTGATATCATGAGT...TGACCTGTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR GCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTTGGTCCAGATCCTTCTaGTGTGGAAACGTGGACTCC +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCWSRSF*CGNVDS
Trigger: GGAGTCCACGTTTCCACAGCAGAAGGATCTGGACCA...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392832.6
CDS-3UTR GCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTGCATTGCCATGCTCCTaGTGTTTCACTGAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIALPCS*CFTEAK
Trigger: TTTGGCTTCAGTGAAACAGCAGGAGCATGGCAATGC...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTCTGGAGCCATTCTTCTaGATTCTTCTCATCCTTGGC +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGILEPFF*ILLILG
Trigger: GCCAAGGATGAGAAGAATGCAGAAGAATGGCTCCAG...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTTTTGGCTTGGGCAACTaGCACGTTGATGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCFGLGN*HVDALE
Trigger: CTCCAGTGCATCAACGTGGCAGTTGCCCAAGCCAAA...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp ACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGTCTCTCCCAAACTTCTaGTTAGACCTAACAATTGAC +
Preference number: 4 (lower is better)
Translates to: TCSTQYTEIRSPQLVVEQSLPNF*LDLTID
Trigger: GTCAATTGTTAGGTCTAAGCAGAAGTTTGGGAGAGA...CTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR GCA 90 bp GTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCTCTCCCAAACTTCTaGTTAGACCTAACAATTGAC +
Preference number: 4 (lower is better)
Translates to: VFHTPLSDVFHSVHRDKISLPNF*LDLTID
Trigger: GTCAATTGTTAGGTCTAAGCAGAAGTTTGGGAGAGA...GATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR GCA 90 bp ATCCACCACCACTGCTCCATGATGGTCAGAACCTCTGCTTCTTCTTATCTGAATGATGGTCAGAACCTCTaGTTCTTCTTATCTGAATTA +
Preference number: 4 (lower is better)
Translates to: IHHHCSMMVRTSASSYLNDGQNL*FFLSEL
Trigger: TAATTCAGATAAGAAGAAGCAGAGGTTCTGACCATC...ATTCAGATAAGAAGAAGCAGAGGTTCTGACCATCATGGAGCAGTGGTGGTGGAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR CCA 90 bp TACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGATTTCAACTACTGCCTaGTCATTGTTATTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: YTEIRSPQLVVEQVTRSTISTTA*SLLLVW
Trigger: CCAAACCAATAACAATGACCAGGCAGTAGTTGAAAT...CGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CCA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCAACGAATGCTCCATGTTaGCCAGTTGGCTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSTNAPC*PVGSPG
Trigger: ACCTGGTGAGCCAACTGGCCAACATGGAGCATTCGT...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTGCCACTTCCAGCCTTaGTATTTTCCAGTTGTCGGG +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGCHFQP*YFPVVG
Trigger: CCCGACAACTGGAAAATACCAAGGCTGGAAGTGGCA...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTTGCCACTTCCAGCCTTaGTATTTTCCAGTTGTCGGG +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMACHFQP*YFPVVG
Trigger: CCCGACAACTGGAAAATACCAAGGCTGGAAGTGGCA...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTAAGAGAGATGCTGGCTaGTATGTCTCCCCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIKRDAG*YVSPVF
Trigger: GAAAACAGGGGAGACATACCAGCCAGCATCTCTCTT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTCATGATCTGGATCCATaGCTGAGGTTCTTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIHDLDP*LRFLAD
Trigger: ATCAGCCAAGAACCTCAGCCATGGATCCAGATCATG...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTAGATGGAGCTGTACCTaGTCCAGATCCTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMARWSCT*SRSFCC
Trigger: ACAGCAGAAGGATCTGGACCAGGTACAGCTCCATCT...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392832.6
CDS-3UTR CCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTGCCACGTTGATGCACTaGAGCCATTCTTCTGCATTC +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAATLMH*SHSSAF
Trigger: GAATGCAGAAGAATGGCTCCAGTGCATCAACGTGGC...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTTCCCTTTCTTTGGCTTaGGCAACTGCCACGTTGATG +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMASLSLA*ATATLM
Trigger: CATCAACGTGGCAGTTGCCCAAGCCAAAGAAAGGGA...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACAGGTCATTTCGCACCATACCTTaGAGTATGCTCTTTACTATA +
Preference number: 4 (lower is better)
Translates to: WEGTQTARLSNLLHVHRSFRTIP*SMLFTI
Trigger: TATAGTAAAGAGCATACTCCAAGGTATGGTGCGAAA...TGACCTGTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR TCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTGAGGTCCCCAGCTCGTaGAAGATCTTTTTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCEVPSS*KIFLSQ
Trigger: TTGGGACAAAAAGATCTTTCACGAGCTGGGGACCTC...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTAGCAGGAGAATATGGTaGAACGAATGCTCCATGTTG +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGISRRIW*NECSML
Trigger: CAACATGGAGCATTCGTTTCACCATATTCTCCTGCT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCCATTTTCAGTTACTATaGGCTTGGTTTCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGHFQLL*AWFLPV
Trigger: AACTGGAAGAAACCAAGCTCATAGTAACTGAAAATG...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCCTTCAGGGAGCAGGTaGAGAACAACTTTGCTACAC +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCPSGSR*RTTLLH
Trigger: GTGTAGCAAAGTTGTTCTTCACCTGCTCCCTGAAGG...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCAATCTGGATCCATGGCTaGGGTTCTTGGCTGATGAGA +
Preference number: 4 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSIWIHG*GSWLMR
Trigger: TCTCATCAGCCAAGAACCTCAGCCATGGATCCAGAT...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTCACTCTGTACTTTGCTaGGTTCTATTGGGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAHSVLC*VLLGSR
Trigger: ACGACTGCCCAATAGAACTCAGCAAAGTACAGAGTG...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCCCCAGGGGATCTCTTTaGTTAACTCAAAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGPRGSL*LTQSQL
Trigger: CAGCTGACTTTGAGTTAATCAAAGAGATCCCCTGGG...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp GATTTCAACTACTGCCTGGTCATTGTTATTGGTTTGGTAATCCACCACCACTGCCTGCTTCTTCTTATCTaGATTATTTCAGTAGCCACT +
Preference number: 4 (lower is better)
Translates to: DFNYCLVIVIGLVIHHHCLLLLI*IISVAT
Trigger: AGTGGCTACTGAAATAATTCAGATAAGAAGAAGCAG...GCAGTGGTGGTGGATTACCAAACCAATAACAATGACCAGGCAGTAGTTGAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR GCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCCCCACAAGGGCCTTTaGATGCTTTTCAATGGACTC +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCPHKGL*MLFNGL
Trigger: GAGTCCATTGAAAAGCATGCAAAGGCCCTTGTGGGG...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp ACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGACTCATGATATCAGATaGGATTTTTGCATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: TCSTQYTEIRSPQLVVEQTHDIR*DFCMRS
Trigger: ACTCCTCATGCAAAAATCGCATCTGATATCATGAGT...CTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR GCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTATCTGCCTTGGTAATTaGAGCCAGAGACAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIICLGN*SQRQVV
Trigger: AACTACCTGTCTCTGGCTGCAATTACCAAGGCAGAT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTATCAGCCAGGAGATCTaGCTTGGTAATTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCISQEI*LGNCSQ
Trigger: CTGGCTGCAATTACCAAGGCAGATCTCCTGGCTGAT...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTTTTAGCTGGGTCCTCTaGTCAGAGTTTCACAAAGCT +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIFSWVL*SEFHKA
Trigger: AGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAA...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCATTTCAACTACTGCCTaGTCATTGTTATTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGISTTA*SLLLVW
Trigger: CCAAACCAATAACAATGACCAGGCAGTAGTTGAAAT...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTAAAAGCCGTAGTAGATaGTACTGTTCTGGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIKSRSR*YCSGCS
Trigger: GGAACAGCCAGAACAGTACCATCTACTACGGCTTTT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTACTGTTCAAAGCCACTaGCTCATAGACTGCTATCTC +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGITVQSH*LIDCYL
Trigger: GAGATAGCAGTCTATGAGCCAGTGGCTTTGAACAGT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCACTGAAAGAGAGATGCTaGCTGGTATGTCTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSLKERC*LVCLPC
Trigger: ACAGGGGAGACATACCAGCCAGCATCTCTCTTTCAG...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCTGAAAGAGAGATGCTaGCTGGTATGTCTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCLKERC*LVCLPC
Trigger: ACAGGGGAGACATACCAGCCAGCATCTCTCTTTCAG...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTTCACAGTGTCTTCAATaGTACACTGATCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGISQCLQ*YTDQGL
Trigger: CAGTCCCTGATCAGTGTACCATTGAAGACACTGTGA...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCCATGATCTGGATCCATaGCTGAGGTTCTTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGHDLDP*LRFLAD
Trigger: ATCAGCCAAGAACCTCAGCCATGGATCCAGATCATG...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCACGTGGACTCCATCATaGCAGTTTCAAAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGTWTPS*QFQSCE
Trigger: CTCACAGCTTTGAAACTGCCATGATGGAGTCCACGT...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392832.6
CDS-3UTR CCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTCTGCTGTGGAAACGTaGACTCCATCATGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGSAVET*TPSWQF
Trigger: AAACTGCCATGATGGAGTCCACGTTTCCACAGCAGA...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392832.6
CDS-3UTR CCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTCAGATCCTTCTGCTGTaGAAACGTGGACTCCATCAT +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAQILLL*KRGLHH
Trigger: ATGATGGAGTCCACGTTTCCACAGCAGAAGGATCTG...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392832.6
CDS-3UTR CCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTTTTGCTGAGTTCTATTaGGCAGTCGTCAGGGTCATC +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAFAEFY*AVVRVI
Trigger: GATGACCCTGACGACTGCCCAATAGAACTCAGCAAA...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TACAGATTTCAACTACTGCCTGGTCATTGTTATTGGTTTGGTAATCCACCACCATGCCAGACTTCTAAATaGTGGATTCCTCCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: YRFQLLPGHCYWFGNPPPCQTSK*WIPPCL
Trigger: TAAACAGGGAGGAATCCACCATTTAGAAGTCTGGCA...TGGTGGTGGATTACCAAACCAATAACAATGACCAGGCAGTAGTTGAAATCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR CCA 90 bp CAGGTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGGCAGTTCTTCAAACTTaGAGTATGCTCTTTACTATA +
Preference number: 4 (lower is better)
Translates to: QVFHTPLSDVFHSVHRDKAVLQT*SMLFTI
Trigger: TATAGTAAAGAGCATACTCCAAGTTTGAAGAACTGC...CTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537559.5
CDS-3UTR TCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCGATGCGATTTTTGCATaGGGAGTGTCTTCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGDAIFA*GVSSSF
Trigger: GAAAGACGAAGACACTCCTCATGCAAAAATCGCATC...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTATGTCTATTAATTGGCTaGGGCTGCTTTTCATACACA +
Preference number: 4 (lower is better)
Translates to: WEPFYHVLASVVVREDHVCLLIG*GCFSYT
Trigger: TGTGTATGAAAAGCAGCCTCAGCCAATTAATAGACA...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCAGCAGGAGAATATGGTaGAACGAATGCTCCATGTTG +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGSRRIW*NECSML
Trigger: CAACATGGAGCATTCGTTTCACCATATTCTCCTGCT...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTAAGTGGGTCTATTTCTaGAAGAGAGATGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCKWVYF*KRDAGW
Trigger: CCAGCCAGCATCTCTCTTTCAGAAATAGACCCACTT...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTCTTCAATGGTACACTaGTCAGGGACTGGAATCTTC +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGSSMVH*SGTGIF
Trigger: GAAGATTCCAGTCCCTGATCAGTGTACCATTGAAGA...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTGCTGAAATAGAAACATaGTCTGGATCCATGGCTGAG +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAAEIET*SGSMAE
Trigger: CTCAGCCATGGATCCAGATCATGTTTCTATTTCAGC...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCGGAAACAGGCTCTGCTaGAATAGAAACATGATCTGG +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGGNRLC*NRNMIW
Trigger: CCAGATCATGTTTCTATTTCAGCAGAGCCTGTTTCC...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392832.6
CDS-3UTR TCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTGGAAACAGGCTCTGCTaGAATAGAAACATGATCTGG +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAGNRLC*NRNMIW
Trigger: CCAGATCATGTTTCTATTTCAGCAGAGCCTGTTTCC...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392832.6
CDS-3UTR TCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCACTCTGTACTTTGCTaGGTTCTATTGGGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCHSVLC*VLLGSR
Trigger: ACGACTGCCCAATAGAACTCAGCAAAGTACAGAGTG...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCACCCAGGGGATCTCTTTaGTTAACTCAAAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSPRGSL*LTQSQL
Trigger: CAGCTGACTTTGAGTTAATCAAAGAGATCCCCTGGG...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTTTTAAAGGACTAGTCTaGTTAGGTCAGGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCFKGLV*LGQAHP
Trigger: TGGGTGGGCCTGACCTAATCAGACTAGTCCTTTAAA...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTTGCACAGTTCCTTGTTaGCTCTGTGGAGGAATTTCA +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMACTVPC*LCGGIS
Trigger: TGAAATTCCTCCACAGAGGCAACAAGGAACTGTGCA...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTTTCTTTGCTGCTACATaGAAAAGCCGTAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIFFAAT*KSRSRW
Trigger: CCATCTACTACGGCTTTTGCATGTAGCAGCAAAGAA...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTAAGGGGTATTGCTCCCTaGATTTATCTTGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: WEPFYHVLASVVVREDHVRGIAP*IYLVFK
Trigger: TTTGAAGACAAGATAAATGCAGGGAGCAATACCCCT...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTGCATTGCCATGCTCCTaGTGTTTCACTGAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCALPCS*CFTEAK
Trigger: TTTGGCTTCAGTGAAACAGCAGGAGCATGGCAATGC...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCTTGATTTACAACAGTTaGTTTCTCAGGATTGTTGCA +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGLIYNS*FLRIVA
Trigger: TGCAACAATCCTGAGAAAGCAACTGTTGTAAATCAA...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCACTGGAGCCATTCTTCTaGATTCTTCTCATCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSLEPFF*ILLILG
Trigger: GCCAAGGATGAGAAGAATGCAGAAGAATGGCTCCAG...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCGGAATTTCACTGCAATaGGGATGGCTAATGCCATCA +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGGISLQ*GWLMPS
Trigger: TGATGGCATTAGCCATCCCCATTGCAGTGAAATTCC...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTACACTCTCAACAACATaGTGTTACCTTGGAGTATGC +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGITLSTT*CYLGVC
Trigger: GCATACTCCAAGGTAACACCATGTTGTTGAGAGTGT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCAAAAGCCGTAGTAGATaGTACTGTTCTGGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGKSRSR*YCSGCS
Trigger: GGAACAGCCAGAACAGTACCATCTACTACGGCTTTT...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTACTGTTCAAAGCCACTaGCTCATAGACTGCTATCTC +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMATVQSH*LIDCYL
Trigger: GAGATAGCAGTCTATGAGCCAGTGGCTTTGAACAGT...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCAATCTCTTTCAGCATTaGAAGAAAACTGTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGNLFQH*KKTVQS
Trigger: GCTTTGAACAGTTTTCTTCCAATGCTGAAAGAGATT...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGATCTGGATCCATaGCTGAGGTTCTTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCHDLDP*LRFLAD
Trigger: ATCAGCCAAGAACCTCAGCCATGGATCCAGATCATG...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCCAGAATGACTCTGAATaGACAGGGGTTCAGGAAACA +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGQNDSE*TGVQET
Trigger: TGTTTCCTGAACCCCTGTCCATTCAGAGTCATTCTG...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392832.6
CDS-3UTR CCA 90 bp ATGGCTGTTGTGATTCTTGTGATACAGATTTCAACTACTGCCTGGTCATTGTTACCTGGTCATTGTTATTaGTTTGGTAATCCACCACCA +
Preference number: 4 (lower is better)
Translates to: MAVVILVIQISTTAWSLLPGHCY*FGNPPP
Trigger: TGGTGGTGGATTACCAAACCAATAACAATGACCAGG...TAACAATGACCAGGCAGTAGTTGAAATCTGTATCACAAGAATCACAACAGCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR TCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCATGAGTTTGATCAGTTaGCTTTCTACAGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGMSLIS*LSTDPE
Trigger: CTCTGGGTCTGTAGAAAGTCAACTGATCAAACTCAT...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCATCTTCAATGGTACACTaGTCAGGGACTGGAATCTTC +
Preference number: 4 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSSSMVH*SGTGIF
Trigger: GAAGATTCCAGTCCCTGATCAGTGTACCATTGAAGA...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTAGAGGCTGGCCATCTTaGTTTACAACAGTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCRGWPS*FTTVAF
Trigger: GAAAGCAACTGTTGTAAATCAAGATGGCCAGCCTCT...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTAGGTTTTATTGTCTGTaGAGATTTCGAAAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCRFYCL*RFRKPG
Trigger: CCCGGGCTTTCGAAATCTTCACAGACAATAAAACCT...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCAAGGTTTTATTGTCTGTaGAGATTTCGAAAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSRFYCL*RFRKPG
Trigger: CCCGGGCTTTCGAAATCTTCACAGACAATAAAACCT...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTAACAGATTTCAACTACTaGCTGGTCATTGTTATTGGT +
Preference number: 4 (lower is better)
Translates to: WEPFYHVLASVVVREDHVTDFNY*LVIVIG
Trigger: ACCAATAACAATGACCAGGCAGTAGTTGAAATCTGT...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTAACTCATGATATCAGATaGGATTTTTGCATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: WEPFYHVLASVVVREDHVTHDIR*DFCMRS
Trigger: ACTCCTCATGCAAAAATCGCATCTGATATCATGAGT...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCATGCACAGTTCCTTGTTaGCTCTGTGGAGGAATTTCA +
Preference number: 4 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSCTVPC*LCGGIS
Trigger: TGAAATTCCTCCACAGAGGCAACAAGGAACTGTGCA...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTATCTGCCTTGGTAATTaGAGCCAGAGACAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCICLGN*SQRQVV
Trigger: AACTACCTGTCTCTGGCTGCAATTACCAAGGCAGAT...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTTTCTTTGCTGCTACATaGAAAAGCCGTAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAFFAAT*KSRSRW
Trigger: CCATCTACTACGGCTTTTGCATGTAGCAGCAAAGAA...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTAGGGGTATTGCTCCCTaGATTTATCTTGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIRGIAP*IYLVFK
Trigger: TTTGAAGACAAGATAAATGCAGGGAGCAATACCCCT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTGGTGAAGAACAACTTTaGTACACAACTTCTCACAGT +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIGEEQL*YTTSHS
Trigger: ACTGTGAGAAGTTGTGTAGCAAAGTTGTTCTTCACC...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGAAGCATTGCCATaGTCCTGCTGTTTCACTGAA +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCHEALP*SCCFTE
Trigger: TTCAGTGAAACAGCAGGAGCATGGCAATGCTTCATG...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCACATGAAGCATTGCCATaGTCCTGCTGTTTCACTGAA +
Preference number: 4 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSHEALP*SCCFTE
Trigger: TTCAGTGAAACAGCAGGAGCATGGCAATGCTTCATG...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTCAGGTGTCTATTAATTaGCTGAGGCTGCTTTTCATA +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIQVSIN*LRLLFI
Trigger: TATGAAAAGCAGCCTCAGCCAATTAATAGACACCTG...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTAGCCTGGATTTTAACTTaGAGTTTTTCATGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: WEPFYHVLASVVVREDHVAWILT*SFSWSS
Trigger: TGAAGACCATGAAAAACTCCAAGTTAAAATCCAGGC...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTATTTGTGAGCATAGTGTaGAAAGCCAAACTTTTTGAC +
Preference number: 4 (lower is better)
Translates to: WEPFYHVLASVVVREDHVFVSIV*KAKLFD
Trigger: GTCAAAAAGTTTGGCTTTCCACACTATGCTCACAAA...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTACTTGCAGTTGTCTCTaGAGTTTCTTCCTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCTCSCL*SFFLGV
Trigger: AACTCCCAGGAAGAAACTCCAGAGACAACTGCAAGT...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTTCACAGTGTCTTCAATaGTACACTGATCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCSQCLQ*YTDQGL
Trigger: CAGTCCCTGATCAGTGTACCATTGAAGACACTGTGA...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp GATTCTTGTGATACAGATTTCAACTACTGCCTGGTCATTGTTATTGGTTTGGTATGCCAGACTTCTAAATaGTGGATTCCTCCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: DSCDTDFNYCLVIVIGLVCQTSK*WIPPCL
Trigger: TAAACAGGGAGGAATCCACCATTTAGAAGTCTGGCA...TACCAAACCAATAACAATGACCAGGCAGTAGTTGAAATCTGTATCACAAGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR TCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTATGAGTTTGATCAGTTaGCTTTCTACAGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCMSLIS*LSTDPE
Trigger: CTCTGGGTCTGTAGAAAGTCAACTGATCAAACTCAT...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTAAAGGAATACACTTCTaGACTACCTCGAGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIKGIHF*TTSSCF
Trigger: AAAACAACTCGAGGTAGTTCAGAAGTGTATTCCTTT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTGATGTCATTATGGGTTaGATCCTTCAAATGCCCAAT +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMADVIMG*ILQMPN
Trigger: ATTGGGCATTTGAAGGATTCAACCCATAATGACATC...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCGATGTCATTATGGGTTaGATCCTTCAAATGCCCAAT +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGDVIMG*ILQMPN
Trigger: ATTGGGCATTTGAAGGATTCAACCCATAATGACATC...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCATTCAATTTCAGTGCTaGTTTTTCTCCTGCCACTTC +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGIQFQC*FFSCHF
Trigger: GAAGTGGCAGGAGAAAAATCAGCACTGAAATTGAAT...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTCATTTTCAGTTACTATaGGCTTGGTTTCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIHFQLL*AWFLPV
Trigger: AACTGGAAGAAACCAAGCTCATAGTAACTGAAAATG...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTCATACATTTATTATCTaGAAGTTTCTGTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIHTFII*KFLWVR
Trigger: CCTGACCCACAGAAACTTTCAGATAATAAATGTATG...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCATTGACACTCTCTCTTTaGACAGGAATCTCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSLTLSL*TGISGH
Trigger: ATGACCAGAGATTCCTGTGCAAAGAGAGAGTGTCAA...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTATCAGATGCGATTTTTaGATGAGGAGTGTCTTCGTC +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCIRCDF*MRSVFV
Trigger: GACGAAGACACTCCTCATGCAAAAATCGCATCTGAT...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTATTGATTTACAACAGTTaGTTTCTCAGGATTGTTGCA +
Preference number: 4 (lower is better)
Translates to: WEPFYHVLASVVVREDHVLIYNS*FLRIVA
Trigger: TGCAACAATCCTGAGAAAGCAACTGTTGTAAATCAA...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTATTTCAACTACTGCCTaGTCATTGTTATTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIISTTA*SLLLVW
Trigger: CCAAACCAATAACAATGACCAGGCAGTAGTTGAAAT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTAGGATGATGTCATTATaGGTTGAATCCTTCAAATGC +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIRMMSL*VESFKC
Trigger: GCATTTGAAGGATTCAACCCATAATGACATCATCCT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTGCCTGGATTTTAACTTaGAGTTTTTCATGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIAWILT*SFSWSS
Trigger: TGAAGACCATGAAAAACTCCAAGTTAAAATCCAGGC...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTAGCTTGTCATTTCCTTaGCCAAGTGGGTCTATTTCT +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCSLSFP*PSGSIS
Trigger: AGAAATAGACCCACTTGGCCAAGGAAATGACAAGCT...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTATCCCTACAGATATGTaGTTACTTCTCTACTTTCCC +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAIPTDM*LLLYFP
Trigger: GGGAAAGTAGAGAAGTAACCACATATCTGTAGGGAT...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTAATCTTTCCTCAGGATaGAGAGTTCAGGCATCTTTT +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMANLSSG*RVQASF
Trigger: AAAAGATGCCTGAACTCTCCATCCTGAGGAAAGATT...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTATAACTGGCTTGATTTaGGAACCATTTTACCATGTG +
Preference number: 4 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIITGLI*EPFYHV
Trigger: CACATGGTAAAATGGTTCCCAAATCAAGCCAGTTAT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp TGTGATTCTTGTGATACAGATTTCAACTACTGCCTGGTCATTGTTATTGGTTTGCAGACTTCTAAATGGTaGATTCCTCCCTGTTTAGTT +
Preference number: 4 (lower is better)
Translates to: CDSCDTDFNYCLVIVIGLQTSKW*IPPCLV
Trigger: AACTAAACAGGGAGGAATCCACCATTTAGAAGTCTG...CAAACCAATAACAATGACCAGGCAGTAGTTGAAATCTGTATCACAAGAATCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR TCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTTGTCTATTAATTGGCTaGGGCTGCTTTTCATACACA +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCCLLIG*GCFSYT
Trigger: TGTGTATGAAAAGCAGCCTCAGCCAATTAATAGACA...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCAATTCAATTTCAGTGCTaGTTTTTCTCCTGCCACTTC +
Preference number: 4 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSIQFQC*FFSCHF
Trigger: GAAGTGGCAGGAGAAAAATCAGCACTGAAATTGAAT...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR TCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTATTCAATTTCAGTGCTaGTTTTTCTCCTGCCACTTC +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCIQFQC*FFSCHF
Trigger: GAAGTGGCAGGAGAAAAATCAGCACTGAAATTGAAT...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTACTCATGATATCAGATaGGATTTTTGCATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMATHDIR*DFCMRS
Trigger: ACTCCTCATGCAAAAATCGCATCTGATATCATGAGT...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR GCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCACTCATGATATCAGATaGGATTTTTGCATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGTHDIR*DFCMRS
Trigger: ACTCCTCATGCAAAAATCGCATCTGATATCATGAGT...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TGTTGTGATTCTTGTGATACAGATTTCAACTACTGCCTGGTCATTGTTATTGGTATTTCAACTACTGCCTaGTCATTGTTATTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: CCDSCDTDFNYCLVIVIGISTTA*SLLLVW
Trigger: CCAAACCAATAACAATGACCAGGCAGTAGTTGAAAT...ACCAATAACAATGACCAGGCAGTAGTTGAAATCTGTATCACAAGAATCACAACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR CCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCAGGTGTCTATTAATTaGCTGAGGCTGCTTTTCATA +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCQVSIN*LRLLFI
Trigger: TATGAAAAGCAGCCTCAGCCAATTAATAGACACCTG...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCAGGATGATGTCATTATaGGTTGAATCCTTCAAATGC +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGRMMSL*VESFKC
Trigger: GCATTTGAAGGATTCAACCCATAATGACATCATCCT...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTAGGATGATGTCATTATaGGTTGAATCCTTCAAATGC +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMARMMSL*VESFKC
Trigger: GCATTTGAAGGATTCAACCCATAATGACATCATCCT...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTTTGTGAGCATAGTGTaGAAAGCCAAACTTTTTGAC +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGFVSIV*KAKLFD
Trigger: GTCAAAAAGTTTGGCTTTCCACACTATGCTCACAAA...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTCTGGAGTTTCTTCCTaGGAGTTTTCTTTAACAGTT +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGSGVSS*EFSLTV
Trigger: AACTGTTAAAGAAAACTCCCAGGAAGAAACTCCAGA...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTAAAGGAATACACTTCTaGACTACCTCGAGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCKGIHF*TTSSCF
Trigger: AAAACAACTCGAGGTAGTTCAGAAGTGTATTCCTTT...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR TCA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCACATTTTCAGTTACTATaGGCTTGGTTTCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSHFQLL*AWFLPV
Trigger: AACTGGAAGAAACCAAGCTCATAGTAACTGAAAATG...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR GCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTTTGATTTACAACAGTTaGTTTCTCAGGATTGTTGCA +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMALIYNS*FLRIVA
Trigger: TGCAACAATCCTGAGAAAGCAACTGTTGTAAATCAA...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTATTTCAACTACTGCCTaGTCATTGTTATTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCISTTA*SLLLVW
Trigger: CCAAACCAATAACAATGACCAGGCAGTAGTTGAAAT...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTAACATGGTGTTACCTTaGAGTATGCTCTTTACTATA +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMANMVLP*SMLFTI
Trigger: TATAGTAAAGAGCATACTCCAAGGTAACACCATGTT...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCAACATGGTGTTACCTTaGAGTATGCTCTTTACTATA +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGNMVLP*SMLFTI
Trigger: TATAGTAAAGAGCATACTCCAAGGTAACACCATGTT...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTAATCTCTTTCAGCATTaGAAGAAAACTGTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMANLFQH*KKTVQS
Trigger: GCTTTGAACAGTTTTCTTCCAATGCTGAAAGAGATT...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCAGCCTGGATTTTAACTTaGAGTTTTTCATGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSAWILT*SFSWSS
Trigger: TGAAGACCATGAAAAACTCCAAGTTAAAATCCAGGC...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CCA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCATAATACAATGCCTGTaGTGTATAATTGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGIIQCL*CIIVMA
Trigger: AGCCATGACAATTATACACCACAGGCATTGTATTAT...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CCA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTATAATACAATGCCTGTaGTGTATAATTGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAIIQCL*CIIVMA
Trigger: AGCCATGACAATTATACACCACAGGCATTGTATTAT...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS GCA 90 bp AGCCTGATGCCACCGGCAGCCCCAGAGACCGGTCAGGTGACAGGCTaGACCTCACCCAGCGGAGTTACCTCCCAGTGCAACGCTCTGTTT +
Preference number: 5 (lower is better)
Translates to: SLMPPAAPETGQVTG*TSPSGVTSQCNALF
Trigger: AAACAGAGCGTTGCACTGGGAGGTAACTCCGCTGGGTGAGGTGCAGCCTGTCACCTGACCGGTCTCTGGGGCTGCCGGTGGCATCAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461299.5
ENST00000494677.5
CDS TCA 90 bp TGCTACTCCTCAAAGGCGCCCTTGCAGTTACTCAGCTGCATGGTTTaGGACTGGGCGGGAGATTCAGGCAGGCTCCGAGGGCACAGCGAG +
Preference number: 5 (lower is better)
Translates to: CYSSKAPLQLLSCMV*DWAGDSGRLRGHSE
Trigger: CTCGCTGTGCCCTCGGAGCCTGCCTGAATCTCCCGCCCAGTCTCAAACCATGCAGCTGAGTAACTGCAAGGGCGCCTTTGAGGAGTAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392832.6
ENST00000461299.5
ENST00000483440.1
ENST00000494677.5
CDS GCA 90 bp AGTTGTTCATTGCGGAGCCGGTGCCGGGTGGAAGAATTCAAGGAATaGAGCCTGATGCCACCGGCAGCCCCAGAGACCGGTCAGGTGACA +
Preference number: 5 (lower is better)
Translates to: SCSLRSRCRVEEFKE*SLMPPAAPETGQVT
Trigger: TGTCACCTGACCGGTCTCTGGGGCTGCCGGTGGCATCAGGCTGCATTCCTTGAATTCTTCCACCCGGCACCGGCTCCGCAATGAACAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461299.5
ENST00000494677.5
CDS CCA 90 bp CTGCGTGCTACTCCTCAAAGGCGCCCTTGCAGTTACTCAGCTGCATaGTTTGAGACTGGGCGGGAGATTCAGGCAGGCTCCGAGGGCACA +
Preference number: 5 (lower is better)
Translates to: LRATPQRRPCSYSAA*FETGREIQAGSEGT
Trigger: TGTGCCCTCGGAGCCTGCCTGAATCTCCCGCCCAGTCTCAAACCATGCAGCTGAGTAACTGCAAGGGCGCCTTTGAGGAGTAGCACGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392832.6
ENST00000461299.5
ENST00000483440.1
ENST00000494677.5
CDS-3UTR CAA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTGCTGCAAGCAAGGCGTaGGCTGGGGCTGGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: WVLCSEFHKAASKALAGAAASKA*AGAGLL
Trigger: TAAAAGCCCAGCCCCAGCCAACGCCTTGCTTGCAGC...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS GCA 90 bp GGTCAGGTGACAGGCTGCACCTCACCCAGCGGAGTTACCTCCCAGTaGAACGCTCTGTTTCCTGAGGTGAAACACAAAGCCTTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: GQVTGCTSPSGVTSQ*NALFPEVKHKALSS
Trigger: AGAGGACAAGGCTTTGTGTTTCACCTCAGGAAACAGAGCGTTGCACTGGGAGGTAACTCCGCTGGGTGAGGTGCAGCCTGTCACCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461299.5
CDS TCA 90 bp CACCTCACCCAGCGGAGTTACCTCCCAGTGCAACGCTCTGTTTCCTaGGGTGAAACACAAAGCCTTGTCCTCTTTGCCTGCCAGACTTCT +
Preference number: 5 (lower is better)
Translates to: HLTQRSYLPVQRSVS*GETQSLVLFACQTS
Trigger: AGAAGTCTGGCAGGCAAAGAGGACAAGGCTTTGTGTTTCACCTCAGGAAACAGAGCGTTGCACTGGGAGGTAACTCCGCTGGGTGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461299.5
CDS-3UTR CAA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTCAGCTTGTCATTTCCTaGGCCAAGTGGGTCTATTTC +
Preference number: 5 (lower is better)
Translates to: WVLCSEFHKAASKALAGAQLVIS*AKWVYF
Trigger: GAAATAGACCCACTTGGCCAAGGAAATGACAAGCTG...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGTGGGCAACTGCCACGTaGATGCACTGGAGCCATTCT +
Preference number: 5 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWWATAT*MHWSHS
Trigger: AGAATGGCTCCAGTGCATCAACGTGGCAGTTGCCCA...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS TCA 90 bp GTGGACACTGAAGGGTGGAGCTTGCTAGCTTTAGGGGCAGCTGGTTaGAGAGGCCCAAATGAAGTCATCAGGTTTCTTGGTGGCAGAATG +
Preference number: 5 (lower is better)
Translates to: VDTEGWSLLALGAAG*RGPNEVIRFLGGRM
Trigger: CATTCTGCCACCAAGAAACCTGATGACTTCATTTGGGCCTCTTCAACCAGCTGCCCCTAAAGCTAGCAAGCTCCACCCTTCAGTGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489602.1
CDS GCA 90 bp CAGGTTATGTTCCAAGCAGGAGTCCCAGAGCCCCACAAGGGCCTTTaGATGCTTTTCAATGGACTCGGTCTCTCTGATGGCTGTTGTGAT +
Preference number: 5 (lower is better)
Translates to: QVMFQAGVPEPHKGL*MLFNGLGLSDGCCD
Trigger: ATCACAACAGCCATCAGAGAGACCGAGTCCATTGAAAAGCATGCAAAGGCCCTTGTGGGGCTCTGGGACTCCTGCTTGGAACATAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000468233.5
ENST00000479987.5
ENST00000482434.1
ENST00000487753.5
ENST00000490235.5
ENST00000494677.5
ENST00000537559.5
CDS TCA 90 bp GCTGTTGCTCATGCGGAAGATGTCTCTGCTCTGAGGGCCCAAGATTaGGGAGAAGGTGTCGGTGATGCTTTTAATCTCCAGCAGGAGAAT +
Preference number: 5 (lower is better)
Translates to: AVAHAEDVSALRAQD*GEGVGDAFNLQQEN
Trigger: ATTCTCCTGCTGGAGATTAAAAGCATCACCGACACCTTCTCCTCAATCTTGGGCCCTCAGAGCAGAGACATCTTCCGCATGAGCAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000488772.1
CDS GCA 90 bp CATTTGAAAGACAGGCACACCCTGTCATTTCCCAGTAGCCAGCCCTaGAGTTCTTACACCTGGCTTTATGCAAGCACAGAAGGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: HLKDRHTLSFPSSQP*SSYTWLYASTEGEA
Trigger: TGCCTCACCTTCTGTGCTTGCATAAAGCCAGGTGTAAGAACTGCAGGGCTGGCTACTGGGAAATGACAGGGTGTGCCTGTCTTTCAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469007.1
CDS-3UTR CAA 90 bp AGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAAATGCAGTTCACTCAGCTGCATGGTTaGAGACTGGGCGGGAGATTC +
Preference number: 5 (lower is better)
Translates to: RSPQLVVEQVTRSTEMQFTQLHG*RLGGRF
Trigger: GAATCTCCCGCCCAGTCTCAAACCATGCAGCTGAGT...GAACTGCATTTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494677.5
CDS TCA 90 bp CCAGCCCTGCAGTTCTTACACCTGGCTTTATGCAAGCACAGAAGGTaGGGCATAAGCCAATCAATAACTTGTGTGATTCCAGGCCGTCTC +
Preference number: 5 (lower is better)
Translates to: PALQFLHLALCKHRR*GISQSITCVIPGRL
Trigger: GAGACGGCCTGGAATCACACAAGTTATTGATTGGCTTATGCCTCACCTTCTGTGCTTGCATAAAGCCAGGTGTAAGAACTGCAGGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469007.1
CDS GCA 90 bp TTATGTTCCAAGCAGGAGTCCCAGAGCCCCACAAGGGCCTTTGCATaGTTTTCAATGGACTCGGTCTCTCTGATGGCTGTTGTGATTCTT +
Preference number: 5 (lower is better)
Translates to: LCSKQESQSPTRAFA*FSMDSVSLMAVVIL
Trigger: AAGAATCACAACAGCCATCAGAGAGACCGAGTCCATTGAAAAGCATGCAAAGGCCCTTGTGGGGCTCTGGGACTCCTGCTTGGAACATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000468233.5
ENST00000479987.5
ENST00000482434.1
ENST00000487753.5
ENST00000490235.5
ENST00000494677.5
ENST00000537559.5
CDS CCA 90 bp TCCTGCACAGTTCCTTGTTGCCTCTGTGGAGGAATTTCACTGCAATaGGGATGGCTAATGCCATCACTGGGGGTCGGTTGTAATTCTGTA +
Preference number: 5 (lower is better)
Translates to: SCTVPCCLCGGISLQ*GWLMPSLGVGCNSV
Trigger: TACAGAATTACAACCGACCCCCAGTGATGGCATTAGCCATCCCCATTGCAGTGAAATTCCTCCACAGAGGCAACAAGGAACTGTGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000468233.5
ENST00000479987.5
ENST00000482434.1
ENST00000487753.5
ENST00000490235.5
ENST00000494677.5
ENST00000537559.5
CDS CCA 90 bp GTTTCACTGAAGCCAAACACGTCAAAGAACCTCACTTCTTCCAGATaGAGCTGTACCTGGTCCAGATCCTTCTGCTGTGGAAACGTGGAC +
Preference number: 5 (lower is better)
Translates to: VSLKPNTSKNLTSSR*SCTWSRSFCCGNVD
Trigger: GTCCACGTTTCCACAGCAGAAGGATCTGGACCAGGTACAGCTCCATCTGGAAGAAGTGAGGTTCTTTGACGTGTTTGGCTTCAGTGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392832.6
CDS-3UTR CAA 90 bp CAGGTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGGCCAGGAGATCTGCCTaGGTAATTGCAGCCAGAGAC +
Preference number: 5 (lower is better)
Translates to: QVFHTPLSDVFHSVHRDKARRSA*VIAARD
Trigger: GTCTCTGGCTGCAATTACCAAGGCAGATCTCCTGGC...CTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp CATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACATCAGTGAACCTGAAGTaGTTCATTGCGGAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: HTPLSDVFHSVHRDKISTSVNLK*FIAEPV
Trigger: CACCGGCTCCGCAATGAACAACTTCAGGTTCACTGA...TGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494677.5
CDS TCA 90 bp GAGAAGGTGTCGGTGATGCTTTTAATCTCCAGCAGGAGAATATGGTaGAACGAATGCTCCATGTTGGCCAGTTGGCTCACCAGGTATGTC +
Preference number: 5 (lower is better)
Translates to: EKVSVMLLISSRRIW*NECSMLASWLTRYV
Trigger: GACATACCTGGTGAGCCAACTGGCCAACATGGAGCATTCGTTTCACCATATTCTCCTGCTGGAGATTAAAAGCATCACCGACACCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000488772.1
CDS TCA 90 bp GATGCTGGCTGGTATGTCTCCCCTGTTTTCATCTTCGCCGTCATCTaGACCCACACCCTTTGTGAGCATAGTGTGGAAAGCCAAACTTTT +
Preference number: 5 (lower is better)
Translates to: DAGWYVSPVFIFAVI*THTLCEHSVESQTF
Trigger: AAAAGTTTGGCTTTCCACACTATGCTCACAAAGGGTGTGGGTTCAGATGACGGCGAAGATGAAAACAGGGGAGACATACCAGCCAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000472419.1
CDS GCA 90 bp GCTTGTCATTTCCTTGGCCAAGTGGGTCTATTTCTGAAAGAGAGATaGTGGCTGGTATGTCTCCCCTGTTTTCATCTTCGCCGTCATCTG +
Preference number: 5 (lower is better)
Translates to: ACHFLGQVGLFLKER*WLVCLPCFHLRRHL
Trigger: CAGATGACGGCGAAGATGAAAACAGGGGAGACATACCAGCCAGCATCTCTCTTTCAGAAATAGACCCACTTGGCCAAGGAAATGACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000472419.1
CDS GCA 90 bp TTCCAGGCCGTCTCTACCCCCATGGCCAAATTCTGGACTGAAGATTaGAAACCCACAGGAGACTCTGCTCTTCTTAAAGATCAAACCATG +
Preference number: 5 (lower is better)
Translates to: FQAVSTPMAKFWTED*KPTGDSALLKDQTM
Trigger: CATGGTTTGATCTTTAAGAAGAGCAGAGTCTCCTGTGGGTTTGCAATCTTCAGTCCAGAATTTGGCCATGGGGGTAGAGACGGCCTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469007.1
CDS CCA 90 bp AAGCCAATCAATAACTTGTGTGATTCCAGGCCGTCTCTACCCCCATaGCCAAATTCTGGACTGAAGATTGCAAACCCACAGGAGACTCTG +
Preference number: 5 (lower is better)
Translates to: KPINNLCDSRPSLPP*PNSGLKIANPQETL
Trigger: CAGAGTCTCCTGTGGGTTTGCAATCTTCAGTCCAGAATTTGGCCATGGGGGTAGAGACGGCCTGGAATCACACAAGTTATTGATTGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469007.1
CDS CCA 90 bp GGTGAAACACAAAGCCTTGTCCTCTTTGCCTGCCAGACTTCTAAATaGTGGATTCCTCCCTGTTTAGTTTCGGGCTCTCTTCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GETQSLVLFACQTSK*WIPPCLVSGSLLFS
Trigger: GGAGAAGAGAAGAGAGCCCGAAACTAAACAGGGAGGAATCCACCATTTAGAAGTCTGGCAGGCAAAGAGGACAAGGCTTTGTGTTTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461299.5
CDS-3UTR CAA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGAGCCCCACAAGGGCCTTaGCATGCTTTTCAATGGACT +
Preference number: 5 (lower is better)
Translates to: FLAAVELMAACLFKANRRAPQGP*HAFQWT
Trigger: AGTCCATTGAAAAGCATGCAAAGGCCCTTGTGGGGC...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp TACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGCCCCACAAGGGCCTTaGCATGCTTTTCAATGGACT +
Preference number: 5 (lower is better)
Translates to: YTEIRSPQLVVEQVTRSTAPQGP*HAFQWT
Trigger: AGTCCATTGAAAAGCATGCAAAGGCCCTTGTGGGGC...CGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp CTGCCTTGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACCTGCACAGTTCCTTGTaGCCTCTGTGGAGGAATTTC +
Preference number: 5 (lower is better)
Translates to: LPWEGTQTARLSNLLHVHLHSSL*PLWRNF
Trigger: GAAATTCCTCCACAGAGGCAACAAGGAACTGTGCAG...GTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCAAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR CAA 90 bp AGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAAATGCAGTTCCTGCACAGTTCCTTGTaGCCTCTGTGGAGGAATTTC +
Preference number: 5 (lower is better)
Translates to: RSPQLVVEQVTRSTEMQFLHSSL*PLWRNF
Trigger: GAAATTCCTCCACAGAGGCAACAAGGAACTGTGCAG...GAACTGCATTTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp AGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAAATGCAGTTCTTCCTGCACAGTTCCTaGTTGCCTCTGTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: RSPQLVVEQVTRSTEMQFFLHSS*LPLWRN
Trigger: ATTCCTCCACAGAGGCAACAAGGAACTGTGCAGGAA...GAACTGCATTTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp ACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTTTCCTGCACAGTTCCTaGTTGCCTCTGTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: TPLSDVFHSVHRDKISTVFLHSS*LPLWRN
Trigger: ATTCCTCCACAGAGGCAACAAGGAACTGTGCAGGAA...AACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp GTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCGCCAGGAGATCTGCCTaGGTAATTGCAGCCAGAGAC +
Preference number: 5 (lower is better)
Translates to: VFHTPLSDVFHSVHRDKIARRSA*VIAARD
Trigger: GTCTCTGGCTGCAATTACCAAGGCAGATCTCCTGGC...GATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGACTGCCACTTCCAGCCTaGGTATTTTCCAGTTGTCGG +
Preference number: 5 (lower is better)
Translates to: FLAAVELMAACLFKANRRLPLPA*VFSSCR
Trigger: CCGACAACTGGAAAATACCAAGGCTGGAAGTGGCAG...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGGCTTTCTCAGGATTGTaGCACATGAAGCATTGCCAT +
Preference number: 5 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWAFSGL*HMKHCH
Trigger: ATGGCAATGCTTCATGTGCAACAATCCTGAGAAAGC...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp TGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCTGGGGCTAATGACATAACTGGCTaGATTTGGGAACCATTTTAC +
Preference number: 5 (lower is better)
Translates to: WVLCSEFHKAASKALAGANDITG*IWEPFY
Trigger: GTAAAATGGTTCCCAAATCAAGCCAGTTATGTCATT...AGCCCCAGCCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGACCCAGGGGATCTCTTaGATTAACTCAAAGTCAGCT +
Preference number: 5 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWTQGIS*INSKSA
Trigger: AGCTGACTTTGAGTTAATCAAAGAGATCCCCTGGGT...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp ACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGTCCTCAAAGGCGCCCTaGCAGTTACTCAGCTGCATG +
Preference number: 5 (lower is better)
Translates to: TCSTQYTEIRSPQLVVEQSSKAP*QLLSCM
Trigger: CATGCAGCTGAGTAACTGCAAGGGCGCCTTTGAGGA...CTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494677.5
CDS-3UTR CAA 90 bp CTGCCTTGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACAGTAATTCATCTGCCTaGGGAAGGGACACAGACAGC +
Preference number: 5 (lower is better)
Translates to: LPWEGTQTARLSNLLHVHSNSSA*GRDTDS
Trigger: GCTGTCTGTGTCCCTTCCCAAGGCAGATGAATTACT...GTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCAAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS TCA 90 bp ACATGCAAAAGCCGTAGTAGATGGTACTGTTCTGGCTGTTCCAGCTaGGACATCAAGGCCAGGAGTTCTGTCAGGTGTCTATTAATTGGC +
Preference number: 5 (lower is better)
Translates to: TCKSRSRWYCSGCSS*DIKARSSVRCLLIG
Trigger: GCCAATTAATAGACACCTGACAGAACTCCTGGCCTTGATGTCTCAGCTGGAACAGCCAGAACAGTACCATCTACTACGGCTTTTGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000479987.5
ENST00000482685.5
CDS TCA 90 bp TTACTTCTCTACTTTCCCTTTCTTTGGCTTGGGCAACTGCCACGTTaGTGCACTGGAGCCATTCTTCTGCATTCTTCTCATCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: LLLYFPFLWLGQLPR*CTGAILLHSSHPWP
Trigger: AGGCCAAGGATGAGAAGAATGCAGAAGAATGGCTCCAGTGCATCAACGTGGCAGTTGCCCAAGCCAAAGAAAGGGAAAGTAGAGAAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS TCA 90 bp TTTCGCACCATACCTTGGAGTATGCTCTTTACTATAACTTCCGTGTaGTCAGCCAGGAGATCTGCCTTGGTAATTGCAGCCAGAGACAGG +
Preference number: 5 (lower is better)
Translates to: FRTIPWSMLFTITSV*SARRSALVIAARDR
Trigger: CCTGTCTCTGGCTGCAATTACCAAGGCAGATCTCCTGGCTGATCACACGGAAGTTATAGTAAAGAGCATACTCCAAGGTATGGTGCGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000482434.1
ENST00000494677.5
CDS GCA 90 bp CCATGGAGTTTGTTCATCCACATGCCCAACAGCTCCATAAATCCTTaGCATCTGTCCAGTGAGGTAGGGGAATCTCTCACCAATCTCTTT +
Preference number: 5 (lower is better)
Translates to: PWSLFIHMPNSSINP*HLSSEVGESLTNLF
Trigger: AAAGAGATTGGTGAGAGATTCCCCTACCTCACTGGACAGATGGCAAGGATTTATGGAGCTGTTGGGCATGTGGATGAACAAACTCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469007.1
CDS CCA 90 bp TGTCATTTCCTTGGCCAAGTGGGTCTATTTCTGAAAGAGAGATGCTaGCTGGTATGTCTCCCCTGTTTTCATCTTCGCCGTCATCTGAAC +
Preference number: 5 (lower is better)
Translates to: CHFLGQVGLFLKERC*LVCLPCFHLRRHLN
Trigger: GTTCAGATGACGGCGAAGATGAAAACAGGGGAGACATACCAGCCAGCATCTCTCTTTCAGAAATAGACCCACTTGGCCAAGGAAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000472419.1
CDS CCA 90 bp CCCTACAGATATGTGGTTACTTCTCTACTTTCCCTTTCTTTGGCTTaGGCAACTGCCACGTTGATGCACTGGAGCCATTCTTCTGCATTC +
Preference number: 5 (lower is better)
Translates to: PYRYVVTSLLSLSLA*ATATLMHWSHSSAF
Trigger: GAATGCAGAAGAATGGCTCCAGTGCATCAACGTGGCAGTTGCCCAAGCCAAAGAAAGGGAAAGTAGAGAAGTAACCACATATCTGTAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS CCA 90 bp GTTGAAGAGGCCCAAATGAAGTCATCAGGTTTCTTGGTGGCAGAATaGCAACAGCAACCAGATATTACACCTTGTCCTCTTTGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: VEEAQMKSSGFLVAE*QQQPDITPCPLCLP
Trigger: TGGCAGGCAAAGAGGACAAGGTGTAATATCTGGTTGCTGTTGCCATTCTGCCACCAAGAAACCTGATGACTTCATTTGGGCCTCTTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489602.1
CDS-3UTR CAA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCGCCCCACAAGGGCCTTaGCATGCTTTTCAATGGACT +
Preference number: 5 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGAPQGP*HAFQWT
Trigger: AGTCCATTGAAAAGCATGCAAAGGCCCTTGTGGGGC...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp ACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGGCCCCACAAGGGCCTTaGCATGCTTTTCAATGGACT +
Preference number: 5 (lower is better)
Translates to: TCSTQYTEIRSPQLVVEQAPQGP*HAFQWT
Trigger: AGTCCATTGAAAAGCATGCAAAGGCCCTTGTGGGGC...CTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp GTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCGCCCCACAAGGGCCTTaGCATGCTTTTCAATGGACT +
Preference number: 5 (lower is better)
Translates to: VFHTPLSDVFHSVHRDKIAPQGP*HAFQWT
Trigger: AGTCCATTGAAAAGCATGCAAAGGCCCTTGTGGGGC...GATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGATTCCTGCACAGTTCCTaGTTGCCTCTGTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: FLAAVELMAACLFKANRRFLHSS*LPLWRN
Trigger: ATTCCTCCACAGAGGCAACAAGGAACTGTGCAGGAA...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGAGTTGCACATGAAGCATaGCCATGCTCCTGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: FLAAVELMAACLFKANRRVAHEA*PCSCCF
Trigger: GAAACAGCAGGAGCATGGCAATGCTTCATGTGCAAC...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTCGGTCCCTGCGTTTCTaGGCCACAGCCTTCACACTC +
Preference number: 5 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIRSLRF*ATAFTL
Trigger: GAGTGTGAAGGCTGTGGCCAAGAAACGCAGGGACCG...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACAGGTCAAGTAATTCATCTGCCTaGGGAAGGGACACAGACAGC +
Preference number: 5 (lower is better)
Translates to: WEGTQTARLSNLLHVHRSSNSSA*GRDTDS
Trigger: GCTGTCTGTGTCCCTTCCCAAGGCAGATGAATTACT...TGACCTGTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR CAA 90 bp TGGTTTGGTAATCCACCACCACTGCTCCATGATGGTCAGAACCTCTGCTTCTTCACTCTCTTGTCCTCTTaGCCTGCCAGACTTCTAAAT +
Preference number: 5 (lower is better)
Translates to: WFGNPPPLLHDGQNLCFFTLLSS*PARLLN
Trigger: ATTTAGAAGTCTGGCAGGCAAAGAGGACAAGAGAGT...GAAGAAGCAGAGGTTCTGACCATCATGGAGCAGTGGTGGTGGATTACCAAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR CAA 90 bp GTTATTGGTTTGGTAATCCACCACCACTGCTCCATGATGGTCAGAACCTCTGCTGACATATTCGCATCATaGCAAGTGCAGGAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: VIGLVIHHHCSMMVRTSADIFAS*QVQEKP
Trigger: TGGCTTCTCCTGCACTTGCAATGATGCGAATATGTC...AGCAGAGGTTCTGACCATCATGGAGCAGTGGTGGTGGATTACCAAACCAATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473907.5
CDS TCA 90 bp AACATGGTGTTACCTTGGAGTATGCTCTTTACTATAACTTCCGTGTaGTCAGCCAGGAGATCTGCCTTGGTAATTGCAGCCAGAGACAGG +
Preference number: 5 (lower is better)
Translates to: NMVLPWSMLFTITSV*SARRSALVIAARDR
Trigger: CCTGTCTCTGGCTGCAATTACCAAGGCAGATCTCCTGGCTGATCACACGGAAGTTATAGTAAAGAGCATACTCCAAGGTAACACCATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000479987.5
CDS TCA 90 bp CTTAAACGGCAGCTTGTCATTTCCTTGGCCAAGTGGGTCTATTTCTaGAAGAGAGATGCTGGCTGGTATGTCTCCCCTGTTTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: LKRQLVISLAKWVYF*KRDAGWYVSPVFIF
Trigger: GAAGATGAAAACAGGGGAGACATACCAGCCAGCATCTCTCTTTCAGAAATAGACCCACTTGGCCAAGGAAATGACAAGCTGCCGTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000472419.1
CDS TCA 90 bp GCAGTTCTTCAAACTTGGAGTATGCTCTTTACTATAACTTCCGTGTaGTCAGCCAGGAGATCTGCCTTGGTAATTGCAGCCAGAGACAGG +
Preference number: 5 (lower is better)
Translates to: AVLQTWSMLFTITSV*SARRSALVIAARDR
Trigger: CCTGTCTCTGGCTGCAATTACCAAGGCAGATCTCCTGGCTGATCACACGGAAGTTATAGTAAAGAGCATACTCCAAGTTTGAAGAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490235.5
ENST00000537559.5
CDS GCA 90 bp TGCCTGGTCATTGTTATTGGTTTGGTAATCCTTGTCCTCTTTGCCTaGCAGACTTCTAAATGGTGGATTCCTCCCTGTTTAGTTTCGGGC +
Preference number: 5 (lower is better)
Translates to: CLVIVIGLVILVLFA*QTSKWWIPPCLVSG
Trigger: GCCCGAAACTAAACAGGGAGGAATCCACCATTTAGAAGTCTGGCAGGCAAAGAGGACAAGGATTACCAAACCAATAACAATGACCAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479987.5
CDS CCA 90 bp CTGTCCAGTGAGGTAGGGGAATCTCTCACCAATCTCTTTCAGCATTaGAAGAAAACTGTTCAAAGCCACTGGCTCATAGACTGCTATCTC +
Preference number: 5 (lower is better)
Translates to: LSSEVGESLTNLFQH*KKTVQSHWLIDCYL
Trigger: GAGATAGCAGTCTATGAGCCAGTGGCTTTGAACAGTTTTCTTCCAATGCTGAAAGAGATTGGTGAGAGATTCCCCTACCTCACTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000469007.1
ENST00000482685.5
CDS CCA 90 bp TGTGATCTCTCAGTGTCTGTCTTAAACGGCAGCTTGTCATTTCCTTaGCCAAGTGGGTCTATTTCTGAAAGAGAGATGCTGGCTGGTATG +
Preference number: 5 (lower is better)
Translates to: CDLSVSVLNGSLSFP*PSGSISEREMLAGM
Trigger: CATACCAGCCAGCATCTCTCTTTCAGAAATAGACCCACTTGGCCAAGGAAATGACAAGCTGCCGTTTAAGACAGACACTGAGAGATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000472419.1
CDS CCA 90 bp ATTGGTTTGGTAATCCTTGTCCTCTTTGCCTGCCAGACTTCTAAATaGTGGATTCCTCCCTGTTTAGTTTCGGGCTCTCTTCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: IGLVILVLFACQTSK*WIPPCLVSGSLLFS
Trigger: GGAGAAGAGAAGAGAGCCCGAAACTAAACAGGGAGGAATCCACCATTTAGAAGTCTGGCAGGCAAAGAGGACAAGGATTACCAAACCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479987.5
CDS CCA 90 bp AACCAGATATTACACCTTGTCCTCTTTGCCTGCCAGACTTCTAAATaGTGGATTCCTCCCTGTTTAGTTTCGGGCTCTCTTCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: NQILHLVLFACQTSK*WIPPCLVSGSLLFS
Trigger: GGAGAAGAGAAGAGAGCCCGAAACTAAACAGGGAGGAATCCACCATTTAGAAGTCTGGCAGGCAAAGAGGACAAGGTGTAATATCTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489602.1
CDS-3UTR CAA 90 bp CAGGTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGAACCAGTCTGAACAGTaGATGCATGGTGAGGATGAG +
Preference number: 5 (lower is better)
Translates to: QVFHTPLSDVFHSVHRDKNQSEQ*MHGEDE
Trigger: CTCATCCTCACCATGCATCAACTGTTCAGACTGGTT...CTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp AATCCACCACCACTGCTCCATGATGGTCAGAACCTCTGCTTCTTCTTATCTGAAAACCAGTCTGAACAGTaGATGCATGGTGAGGATGAG +
Preference number: 5 (lower is better)
Translates to: NPPPLLHDGQNLCFFLSENQSEQ*MHGEDE
Trigger: CTCATCCTCACCATGCATCAACTGTTCAGACTGGTT...TTCAGATAAGAAGAAGCAGAGGTTCTGACCATCATGGAGCAGTGGTGGTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR CAA 90 bp ACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAAAACCAGTCTGAACAGTaGATGCATGGTGAGGATGAG +
Preference number: 5 (lower is better)
Translates to: TEIRSPQLVVEQVTRSTENQSEQ*MHGEDE
Trigger: CTCATCCTCACCATGCATCAACTGTTCAGACTGGTT...TTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCTTATCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp GTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCCTGCACAGTTCCTTGTaGCCTCTGTGGAGGAATTTC +
Preference number: 5 (lower is better)
Translates to: VFHTPLSDVFHSVHRDKILHSSL*PLWRNF
Trigger: GAAATTCCTCCACAGAGGCAACAAGGAACTGTGCAG...GATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp ACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGTTCCTGCACAGTTCCTaGTTGCCTCTGTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: TCSTQYTEIRSPQLVVEQFLHSS*LPLWRN
Trigger: ATTCCTCCACAGAGGCAACAAGGAACTGTGCAGGAA...CTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTAGCCAGGAGATCTGCCTaGGTAATTGCAGCCAGAGAC +
Preference number: 5 (lower is better)
Translates to: WEPFYHVLASVVVREDHVARRSA*VIAARD
Trigger: GTCTCTGGCTGCAATTACCAAGGCAGATCTCCTGGC...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCAACATGGTGTTACCTaGGAGTATGCTCTTTACTAT +
Preference number: 5 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWQHGVT*EYALYY
Trigger: ATAGTAAAGAGCATACTCCAAGGTAACACCATGTTG...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTACTCCATGTTGGCCAGTaGGCTCACCAGGTATGTCAG +
Preference number: 5 (lower is better)
Translates to: WEPFYHVLASVVVREDHVLHVGQ*AHQVCQ
Trigger: CTGACATACCTGGTGAGCCAACTGGCCAACATGGAG...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp GATTTAGCTGGGTCCTCTGCTCAGAGTTTCACAAAGCTGCAAGCAAGGCGTTGGCAAGTAGAGCTTATCTaGGTATTCTATAGGACTTGC +
Preference number: 5 (lower is better)
Translates to: DLAGSSAQSFTKLQARRWQVELI*VFYRTC
Trigger: GCAAGTCCTATAGAATACCAAGATAAGCTCTACTTG...CCAACGCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGAGGACCCAGCTAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCCGGTCCCTGCGTTTCTaGGCCACAGCCTTCACACTC +
Preference number: 5 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGRSLRF*ATAFTL
Trigger: GAGTGTGAAGGCTGTGGCCAAGAAACGCAGGGACCG...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTATGGGCAACTGCCACGTaGATGCACTGGAGCCATTCT +
Preference number: 5 (lower is better)
Translates to: WEPFYHVLASVVVREDHVWATAT*MHWSHS
Trigger: AGAATGGCTCCAGTGCATCAACGTGGCAGTTGCCCA...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp CAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAAATGCAGTTCTTCAAACTGACTTTGAGGTCTTCATaGACACTCTCTGCGTGCTAC +
Preference number: 5 (lower is better)
Translates to: QLVVEQVTRSTEMQFFKLTLRSS*TLSACY
Trigger: GTAGCACGCAGAGAGTGTCAATGAAGACCTCAAAGT...CAGTTTGAAGAACTGCATTTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494677.5
CDS-3UTR CAA 90 bp CATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAATAAGATCTCCACAGTaGGTAGTTGAACAGGTGACC +
Preference number: 5 (lower is better)
Translates to: HTPLSDVFHSVHRDKISTIRSPQ*VVEQVT
Trigger: GGTCACCTGTTCAACTACCAACTGTGGAGATCTTAT...TGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp CACTCTTGCCTTTCCACAGACATATTCGCATCATTGCAAGTGCAGGAGAAGCCAACTCTCTTGTCCTCTTaGCCTGCCAGACTTCTAAAT +
Preference number: 5 (lower is better)
Translates to: HSCLSTDIFASLQVQEKPTLLSS*PARLLN
Trigger: ATTTAGAAGTCTGGCAGGCAAAGAGGACAAGAGAGT...TGGCTTCTCCTGCACTTGCAATGATGCGAATATGTCTGTGGAAAGGCAAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473907.5
CDS GCA 90 bp TACTATAACTTCCGTGTGATCAGCCAGGAGATCTGCCTTGGTAATTaGAGCCAGAGACAGGTAGTTAGACATATTCCTGCACAGTTCCTT +
Preference number: 5 (lower is better)
Translates to: YYNFRVISQEICLGN*SQRQVVRHIPAQFL
Trigger: AAGGAACTGTGCAGGAATATGTCTAACTACCTGTCTCTGGCTGCAATTACCAAGGCAGATCTCCTGGCTGATCACACGGAAGTTATAGTA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000468233.5
ENST00000479987.5
ENST00000482434.1
ENST00000490235.5
ENST00000494677.5
ENST00000537559.5
CDS GCA 90 bp TACAACAGTTGCTTTCTCAGGATTGTTGCACATGAAGCATTGCCATaGTCCTGCTGTTTCACTGAAGCCAAACACGTCAAAGAACCTCAC +
Preference number: 5 (lower is better)
Translates to: YNSCFLRIVAHEALP*SCCFTEAKHVKEPH
Trigger: GTGAGGTTCTTTGACGTGTTTGGCTTCAGTGAAACAGCAGGAGCATGGCAATGCTTCATGTGCAACAATCCTGAGAAAGCAACTGTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS GCA 90 bp TTTGGCTTGGGCAACTGCCACGTTGATGCACTGGAGCCATTCTTCTaGATTCTTCTCATCCTTGGCCTTAAAGACATAGGTTTTATTGTC +
Preference number: 5 (lower is better)
Translates to: FGLGNCHVDALEPFF*ILLILGLKDIGFIV
Trigger: GACAATAAAACCTATGTCTTTAAGGCCAAGGATGAGAAGAATGCAGAAGAATGGCTCCAGTGCATCAACGTGGCAGTTGCCCAAGCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS GCA 90 bp ATATGTGGTTACTTCTCTACTTTCCCTTTCTTTGGCTTGGGCAACTaGCACGTTGATGCACTGGAGCCATTCTTCTGCATTCTTCTCATC +
Preference number: 5 (lower is better)
Translates to: ICGYFSTFPFFGLGN*HVDALEPFFCILLI
Trigger: GATGAGAAGAATGCAGAAGAATGGCTCCAGTGCATCAACGTGGCAGTTGCCCAAGCCAAAGAAAGGGAAAGTAGAGAAGTAACCACATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS GCA 90 bp GACTGTTCCCAAAACAGGAATAGAAAAATTAGACCATGTTACTTCTaGTCAGAACTCTCCAGTGGCTGCCCAAGACTCCAACAATCCAGC +
Preference number: 5 (lower is better)
Translates to: DCSQNRNRKIRPCYF*SELSSGCPRLQQSS
Trigger: GCTGGATTGTTGGAGTCTTGGGCAGCCACTGGAGAGTTCTGAGCAGAAGTAACATGGTCTAATTTTTCTATTCCTGTTTTGGGAACAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482434.1
CDS-3UTR CAA 90 bp CATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGATGAGTTTGATCAGTaGACTTTCTACAGACCCAGA +
Preference number: 5 (lower is better)
Translates to: HTPLSDVFHSVHRDKISTDEFDQ*TFYRPR
Trigger: TCTGGGTCTGTAGAAAGTCAACTGATCAAACTCATC...TGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp ACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTGATGAGTTTGATCAGTaGACTTTCTACAGACCCAGA +
Preference number: 5 (lower is better)
Translates to: TPLSDVFHSVHRDKISTVDEFDQ*TFYRPR
Trigger: TCTGGGTCTGTAGAAAGTCAACTGATCAAACTCATC...AACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp ATTGTTATTGGTTTGGTAATCCACCACCACTGCTCCATGATGGTCAGAACCTCTAACCAGTCTGAACAGTaGATGCATGGTGAGGATGAG +
Preference number: 5 (lower is better)
Translates to: IVIGLVIHHHCSMMVRTSNQSEQ*MHGEDE
Trigger: CTCATCCTCACCATGCATCAACTGTTCAGACTGGTT...AGAGGTTCTGACCATCATGGAGCAGTGGTGGTGGATTACCAAACCAATAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR CAA 90 bp ACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGAACCAGTCTGAACAGTaGATGCATGGTGAGGATGAG +
Preference number: 5 (lower is better)
Translates to: TCSTQYTEIRSPQLVVEQNQSEQ*MHGEDE
Trigger: CTCATCCTCACCATGCATCAACTGTTCAGACTGGTT...CTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp CATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACATATCAGATGCGATTTTaGCATGAGGAGTGTCTTCGT +
Preference number: 5 (lower is better)
Translates to: HTPLSDVFHSVHRDKISTYQMRF*HEECLR
Trigger: ACGAAGACACTCCTCATGCAAAAATCGCATCTGATA...TGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTACTGCCACTTCCAGCCTaGGTATTTTCCAGTTGTCGG +
Preference number: 5 (lower is better)
Translates to: WEPFYHVLASVVVREDHVLPLPA*VFSSCR
Trigger: CCGACAACTGGAAAATACCAAGGCTGGAAGTGGCAG...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCGTCTTAAACGGCAGCTaGTCATTTCCTTGGCCAAGT +
Preference number: 5 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGVLNGS*SFPWPS
Trigger: ACTTGGCCAAGGAAATGACAAGCTGCCGTTTAAGAC...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGACCATGGCTGAGGTTCTaGGCTGATGAGAATAAAACT +
Preference number: 5 (lower is better)
Translates to: FLAAVELMAACLFKANRRPWLRF*ADENKT
Trigger: AGTTTTATTCTCATCAGCCAAGAACCTCAGCCATGG...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCGGTCCCTGCGTTTCTaGGCCACAGCCTTCACACTC +
Preference number: 5 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCRSLRF*ATAFTL
Trigger: GAGTGTGAAGGCTGTGGCCAAGAAACGCAGGGACCG...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTTCCTCAAAGGCGCCCTaGCAGTTACTCAGCTGCATG +
Preference number: 5 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGISSKAP*QLLSCM
Trigger: CATGCAGCTGAGTAACTGCAAGGGCGCCTTTGAGGA...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392832.6
CDS-3UTR CAA 90 bp ACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGACTTTGAGGTCTTCATaGACACTCTCGTGCGGAATC +
Preference number: 5 (lower is better)
Translates to: TCSTQYTEIRSPQLVVEQTLRSS*TLSCGI
Trigger: GATTCCGCACGAGAGTGTCAATGAAGACCTCAAAGT...CTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468233.5
CDS-3UTR CAA 90 bp AGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAAATGCAGTTCCTTTCGCACCATACCTaGGAGTATGCTCTTTACTAT +
Preference number: 5 (lower is better)
Translates to: RSPQLVVEQVTRSTEMQFLSHHT*EYALYY
Trigger: ATAGTAAAGAGCATACTCCAAGGTATGGTGCGAAAG...GAACTGCATTTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR CAA 90 bp CAGGTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATAAGATCTCCACAGTaGGTAGTTGAACAGGTGACC +
Preference number: 5 (lower is better)
Translates to: QVFHTPLSDVFHSVHRDKIRSPQ*VVEQVT
Trigger: GGTCACCTGTTCAACTACCAACTGTGGAGATCTTAT...CTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS GCA 90 bp GATTTCACTCTTGCCTTTCCACAGACATATTCGCATCATTGCAAGTaGAGGAGAAGCCACCTATTTTTCAGCAATCTTCTGTGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: DFTLAFPQTYSHHCK*RRSHLFFSNLLCWK
Trigger: CTTCCAGCACAGAAGATTGCTGAAAAATAGGTGGCTTCTCCTGCACTTGCAATGATGCGAATATGTCTGTGGAAAGGCAAGAGTGAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473907.5
CDS-3UTR CAA 90 bp TACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGATGAGTTTGATCAGTaGACTTTCTACAGACCCAGA +
Preference number: 5 (lower is better)
Translates to: YTEIRSPQLVVEQVTRSTDEFDQ*TFYRPR
Trigger: TCTGGGTCTGTAGAAAGTCAACTGATCAAACTCATC...CGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTGCCCCACAAGGGCCTTaGCATGCTTTTCAATGGACT +
Preference number: 5 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIAPQGP*HAFQWT
Trigger: AGTCCATTGAAAAGCATGCAAAGGCCCTTGTGGGGC...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGATATCAGATGCGATTTTaGCATGAGGAGTGTCTTCGT +
Preference number: 5 (lower is better)
Translates to: FLAAVELMAACLFKANRRYQMRF*HEECLR
Trigger: ACGAAGACACTCCTCATGCAAAAATCGCATCTGATA...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp TACACAGAGATAAGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGTATCAGATGCGATTTTaGCATGAGGAGTGTCTTCGT +
Preference number: 5 (lower is better)
Translates to: YTEIRSPQLVVEQVTRSTYQMRF*HEECLR
Trigger: ACGAAGACACTCCTCATGCAAAAATCGCATCTGATA...CGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCTTATCTCTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTACTGCACAGTTCCTTGTaGCCTCTGTGGAGGAATTTC +
Preference number: 5 (lower is better)
Translates to: WEPFYHVLASVVVREDHVLHSSL*PLWRNF
Trigger: GAAATTCCTCCACAGAGGCAACAAGGAACTGTGCAG...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCAACGAATGCTCCATGTaGGCCAGTTGGCTCACCAGG +
Preference number: 5 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGNECSM*ASWLTR
Trigger: CCTGGTGAGCCAACTGGCCAACATGGAGCATTCGTT...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCCTTGGTATTTTCCAGTaGTCGGGTAAGGAGTTTAGC +
Preference number: 5 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGLGIFQ*SGKEFS
Trigger: GCTAAACTCCTTACCCGACAACTGGAAAATACCAAG...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCGAGAGGCTGGCCATCTaGATTTACAACAGTTGCTTT +
Preference number: 5 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGERLAI*IYNSCF
Trigger: AAAGCAACTGTTGTAAATCAAGATGGCCAGCCTCTC...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCTTCACACTCTGTACTTaGCTGAGTTCTATTGGGCAG +
Preference number: 5 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGFTLCT*LSSIGQ
Trigger: CTGCCCAATAGAACTCAGCAAAGTACAGAGTGTGAA...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTGGGCAACTGCCACGTaGATGCACTGGAGCCATTCT +
Preference number: 5 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGWATAT*MHWSHS
Trigger: AGAATGGCTCCAGTGCATCAACGTGGCAGTTGCCCA...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTACTCAGCTGCATGGTTaGAGACTGGGCGGGAGATTC +
Preference number: 5 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMATQLHG*RLGGRF
Trigger: GAATCTCCCGCCCAGTCTCAAACCATGCAGCTGAGT...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392832.6
CDS-3UTR CAA 90 bp CAGGTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGCTTTCGCACCATACCTaGGAGTATGCTCTTTACTAT +
Preference number: 5 (lower is better)
Translates to: QVFHTPLSDVFHSVHRDKLSHHT*EYALYY
Trigger: ATAGTAAAGAGCATACTCCAAGGTATGGTGCGAAAG...CTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR CAA 90 bp CTCTCTGATGGCTGTTGTGATTCTTGTGATACAGATTTCAACTACTGCCTGGTCGTCATTGTTATTGGTTaGGTAATCCACCACCACTGC +
Preference number: 5 (lower is better)
Translates to: LSDGCCDSCDTDFNYCLVVIVIG*VIHHHC
Trigger: GCAGTGGTGGTGGATTACCAAACCAATAACAATGAC...GACCAGGCAGTAGTTGAAATCTGTATCACAAGAATCACAACAGCCATCAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR CAA 90 bp ATTGTTATTGGTTTGGTAATCCACCACCACTGCTCCATGATGGTCAGAACCTCTGTCATTGTTATTGGTTaGGTAATCCACCACCACTGC +
Preference number: 5 (lower is better)
Translates to: IVIGLVIHHHCSMMVRTSVIVIG*VIHHHC
Trigger: GCAGTGGTGGTGGATTACCAAACCAATAACAATGAC...AGAGGTTCTGACCATCATGGAGCAGTGGTGGTGGATTACCAAACCAATAACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS GCA 90 bp CTTTCTGATTTCACTCTTGCCTTTCCACAGACATATTCGCATCATTaGAAGTGCAGGAGAAGCCACCTATTTTTCAGCAATCTTCTGTGC +
Preference number: 5 (lower is better)
Translates to: LSDFTLAFPQTYSHH*KCRRSHLFFSNLLC
Trigger: GCACAGAAGATTGCTGAAAAATAGGTGGCTTCTCCTGCACTTGCAATGATGCGAATATGTCTGTGGAAAGGCAAGAGTGAAATCAGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473907.5
CDS CCA 90 bp CCTGAAGTTTCTCAGGTTTGGGAAGTACACAACACTTACCTTCAATaGTACACTGATCAGGGACTGGAATCTTCTTTCCAATTTCCATGG +
Preference number: 5 (lower is better)
Translates to: PEVSQVWEVHNTYLQ*YTDQGLESSFQFPW
Trigger: CCATGGAAATTGGAAAGAAGATTCCAGTCCCTGATCAGTGTACCATTGAAGGTAAGTGTTGTGTACTTCCCAAACCTGAGAAACTTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472419.1
CDS-3UTR CAA 90 bp TGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACAGGTCAATTTTTCTCCAGACTTaGAGGTCTTCATTGACACTC +
Preference number: 5 (lower is better)
Translates to: WEGTQTARLSNLLHVHRSIFLQT*RSSLTL
Trigger: GAGTGTCAATGAAGACCTCAAAGTCTGGAGAAAAAT...TGACCTGTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR CAA 90 bp ATTGTTATTGGTTTGGTAATCCACCACCACTGCTCCATGATGGTCAGAACCTCTGATGAGTTTGATCAGTaGACTTTCTACAGACCCAGA +
Preference number: 5 (lower is better)
Translates to: IVIGLVIHHHCSMMVRTSDEFDQ*TFYRPR
Trigger: TCTGGGTCTGTAGAAAGTCAACTGATCAAACTCATC...AGAGGTTCTGACCATCATGGAGCAGTGGTGGTGGATTACCAAACCAATAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR CAA 90 bp CTCTCTGATGGCTGTTGTGATTCTTGTGATACAGATTTCAACTACTGCCTGGTCGATGAGTTTGATCAGTaGACTTTCTACAGACCCAGA +
Preference number: 5 (lower is better)
Translates to: LSDGCCDSCDTDFNYCLVDEFDQ*TFYRPR
Trigger: TCTGGGTCTGTAGAAAGTCAACTGATCAAACTCATC...GACCAGGCAGTAGTTGAAATCTGTATCACAAGAATCACAACAGCCATCAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR CAA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTAAACCAGTCTGAACAGTaGATGCATGGTGAGGATGAG +
Preference number: 5 (lower is better)
Translates to: WEPFYHVLASVVVREDHVNQSEQ*MHGEDE
Trigger: CTCATCCTCACCATGCATCAACTGTTCAGACTGGTT...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCTATCAGATGCGATTTTaGCATGAGGAGTGTCTTCGT +
Preference number: 5 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGYQMRF*HEECLR
Trigger: ACGAAGACACTCCTCATGCAAAAATCGCATCTGATA...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp GTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTATCAGATGCGATTTTaGCATGAGGAGTGTCTTCGT +
Preference number: 5 (lower is better)
Translates to: VFHTPLSDVFHSVHRDKIYQMRF*HEECLR
Trigger: ACGAAGACACTCCTCATGCAAAAATCGCATCTGATA...GATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000494677.5
ENST00000537559.5
CDS-3UTR CAA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTCTGCACAGTTCCTTGTaGCCTCTGTGGAGGAATTTC +
Preference number: 5 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGILHSSL*PLWRNF
Trigger: GAAATTCCTCCACAGAGGCAACAAGGAACTGTGCAG...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTTTCCTGCACAGTTCCTaGTTGCCTCTGTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIFLHSS*LPLWRN
Trigger: ATTCCTCCACAGAGGCAACAAGGAACTGTGCAGGAA...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTGCCAGGAGATCTGCCTaGGTAATTGCAGCCAGAGAC +
Preference number: 5 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCARRSA*VIAARD
Trigger: GTCTCTGGCTGCAATTACCAAGGCAGATCTCCTGGC...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCTCCATGTTGGCCAGTaGGCTCACCAGGTATGTCAG +
Preference number: 5 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCLHVGQ*AHQVCQ
Trigger: CTGACATACCTGGTGAGCCAACTGGCCAACATGGAG...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTATGGCGGTGAAGCTGTaGCTCATGCGGAAGATGTCT +
Preference number: 5 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAMAVKL*LMRKMS
Trigger: AGACATCTTCCGCATGAGCAACAGCTTCACCGCCAT...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCCTGCCACTTCCAGCCTaGGTATTTTCCAGTTGTCGG +
Preference number: 5 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGLPLPA*VFSSCR
Trigger: CCGACAACTGGAAAATACCAAGGCTGGAAGTGGCAG...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCCTCCCTGCATTTATCTaGTCTTCAAAAGCCTGGATT +
Preference number: 5 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGLPAFI*SSKAWI
Trigger: AATCCAGGCTTTTGAAGACAAGATAAATGCAGGGAG...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTAATAGAGCCAGGGGTATaGCTCCCTGCATTTATCTTG +
Preference number: 5 (lower is better)
Translates to: WEPFYHVLASVVVREDHVIEPGV*LPAFIL
Trigger: CAAGATAAATGCAGGGAGCAATACCCCTGGCTCTAT...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGACTTGATTTACAACAGTaGCTTTCTCAGGATTGTTGC +
Preference number: 5 (lower is better)
Translates to: FLAAVELMAACLFKANRRLDLQQ*LSQDCC
Trigger: GCAACAATCCTGAGAAAGCAACTGTTGTAAATCAAG...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTTTCCCTTTCTTTGGCTaGGGCAACTGCCACGTTGAT +
Preference number: 5 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIFPFFG*GNCHVD
Trigger: ATCAACGTGGCAGTTGCCCAAGCCAAAGAAAGGGAA...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTCAGTGAACCTGAAGTaGTTCATTGCGGAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGSVNLK*FIAEPV
Trigger: CACCGGCTCCGCAATGAACAACTTCAGGTTCACTGA...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392832.6
CDS-3UTR CAA 90 bp CTGCCTTGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACAGATTAAGTAACCTTTaGCATGTTCACAGGTCAACT +
Preference number: 5 (lower is better)
Translates to: LPWEGTQTARLSNLLHVHRLSNL*HVHRST
Trigger: AGTTGACCTGTGAACATGCAAAAGGTTACTTAATCT...GTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCAAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR CAA 90 bp AGATCTCCACAGTTGGTAGTTGAACAGGTGACCAGAAGCACGGAAATGCAGTTCCTGAGAAACACAGATTaGGAAGAATGCTTACAATTC +
Preference number: 5 (lower is better)
Translates to: RSPQLVVEQVTRSTEMQFLRNTD*EECLQF
Trigger: GAATTGTAAGCATTCTTCCAAATCTGTGTTTCTCAG...GAACTGCATTTCCGTGCTTCTGGTCACCTGTTCAACTACCAACTGTGGAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR CAA 90 bp GATTTCAACTACTGCCTGGTCATTGTTATTGGTTTGGTAATCCACCACCACTGCACTTTGAGGTCTTCATaGACACTCTCTTGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: DFNYCLVIVIGLVIHHHCTLRSS*TLSCPL
Trigger: AAGAGGACAAGAGAGTGTCAATGAAGACCTCAAAGT...GCAGTGGTGGTGGATTACCAAACCAATAACAATGACCAGGCAGTAGTTGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR CAA 90 bp ACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCTCCACAGTTTGCAGTTCTTCAAACTaGGAGTATGCTCTTTACTAT +
Preference number: 5 (lower is better)
Translates to: TPLSDVFHSVHRDKISTVCSSSN*EYALYY
Trigger: ATAGTAAAGAGCATACTCCAAGTTTGAAGAACTGCA...AACTGTGGAGATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537559.5
CDS TCA 90 bp TTCTCAGGTTTGGGAAGTACACAACACTTACCTTCAATGGTACACTaGTCAGGGACTGGAATCTTCTTTCCAATTTCCATGGCATATGCT +
Preference number: 5 (lower is better)
Translates to: FSGLGSTQHLPSMVH*SGTGIFFPISMAYA
Trigger: AGCATATGCCATGGAAATTGGAAAGAAGATTCCAGTCCCTGATCAGTGTACCATTGAAGGTAAGTGTTGTGTACTTCCCAAACCTGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472419.1
CDS GCA 90 bp CTCTCTGATGGCTGTTGTGATTCTTGTGATACAGATTTCAACTACTaGCTGGTCATTGTTATTGGTTTGGTAATCCTTGTCCTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: LSDGCCDSCDTDFNY*LVIVIGLVILVLFA
Trigger: GGCAAAGAGGACAAGGATTACCAAACCAATAACAATGACCAGGCAGTAGTTGAAATCTGTATCACAAGAATCACAACAGCCATCAGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479987.5
CDS CCA 90 bp GGGAAGTACACAACACTTACCTTCAATGGTACACTGATCAGGGACTaGAATCTTCTTTCCAATTTCCATGGCATATGCTTTCACTTTGCT +
Preference number: 5 (lower is better)
Translates to: GKYTTLTFNGTLIRD*NLLSNFHGICFHFA
Trigger: AGCAAAGTGAAAGCATATGCCATGGAAATTGGAAAGAAGATTCCAGTCCCTGATCAGTGTACCATTGAAGGTAAGTGTTGTGTACTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472419.1
CDS-3UTR CAA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCATTTTTCTCCAGACTTaGAGGTCTTCATTGACACTC +
Preference number: 5 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGIFLQT*RSSLTL
Trigger: GAGTGTCAATGAAGACCTCAAAGTCTGGAGAAAAAT...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTAACCAGTCTGAACAGTaGATGCATGGTGAGGATGAG +
Preference number: 5 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGINQSEQ*MHGEDE
Trigger: CTCATCCTCACCATGCATCAACTGTTCAGACTGGTT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTCTGCACAGTTCCTTGTaGCCTCTGTGGAGGAATTTC +
Preference number: 5 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMALHSSL*PLWRNF
Trigger: GAAATTCCTCCACAGAGGCAACAAGGAACTGTGCAG...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTTTCCTGCACAGTTCCTaGTTGCCTCTGTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAFLHSS*LPLWRN
Trigger: ATTCCTCCACAGAGGCAACAAGGAACTGTGCAGGAA...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCAATGGCGGTGAAGCTGTaGCTCATGCGGAAGATGTCT +
Preference number: 5 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSMAVKL*LMRKMS
Trigger: AGACATCTTCCGCATGAGCAACAGCTTCACCGCCAT...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTATGGCGGTGAAGCTGTaGCTCATGCGGAAGATGTCT +
Preference number: 5 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCMAVKL*LMRKMS
Trigger: AGACATCTTCCGCATGAGCAACAGCTTCACCGCCAT...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTACTTGGTATTTTCCAGTaGTCGGGTAAGGAGTTTAGC +
Preference number: 5 (lower is better)
Translates to: WEPFYHVLASVVVREDHVLGIFQ*SGKEFS
Trigger: GCTAAACTCCTTACCCGACAACTGGAAAATACCAAG...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCAGCCTGGATTTTAACTaGGAGTTTTTCATGGTCTTC +
Preference number: 5 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGSLDFN*EFFMVF
Trigger: GAAGACCATGAAAAACTCCAAGTTAAAATCCAGGCT...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTATAGAGCCAGGGGTATaGCTCCCTGCATTTATCTTG +
Preference number: 5 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIIEPGV*LPAFIL
Trigger: CAAGATAAATGCAGGGAGCAATACCCCTGGCTCTAT...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTAGTTGCTTTCTCAGGATaGTTGCACATGAAGCATTGC +
Preference number: 5 (lower is better)
Translates to: WEPFYHVLASVVVREDHVVAFSG*LHMKHC
Trigger: GCAATGCTTCATGTGCAACAATCCTGAGAAAGCAAC...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTTTCCCTTTCTTTGGCTaGGGCAACTGCCACGTTGAT +
Preference number: 5 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAFPFFG*GNCHVD
Trigger: ATCAACGTGGCAGTTGCCCAAGCCAAAGAAAGGGAA...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGAAATGACATAACTGGCTaGATTTGGGAACCATTTTAC +
Preference number: 5 (lower is better)
Translates to: FLAAVELMAACLFKANRRNDITG*IWEPFY
Trigger: GTAAAATGGTTCCCAAATCAAGCCAGTTATGTCATT...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp TTCCTTGCAGCCGTAGAGCTCATGGCAGCTTGCTTATTTAAGGCTAATAGGAGATTTTGCCATATTCTGTaGGTTAGAAGCAGGTTACAT +
Preference number: 5 (lower is better)
Translates to: FLAAVELMAACLFKANRRFCHIL*VRSRLH
Trigger: ATGTAACCTGCTTCTAACCAACAGAATATGGCAAAA...TCTCCTATTAGCCTTAAATAAGCAAGCTGCCATGAGCTCTACGGCTGCAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp TGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTTGCATGTTCACAGGTCAAGATTAAGTAACCTTTaGCATGTTCACAGGTCAACT +
Preference number: 5 (lower is better)
Translates to: WEGTQTARLSNLLHVHRSRLSNL*HVHRST
Trigger: AGTTGACCTGTGAACATGCAAAAGGTTACTTAATCT...TGACCTGTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS CCA 90 bp TACACAACTTCTCACAGTGTCTTCAATGGTACACTGATCAGGGACTaGAATCTTCTTTCCAATTTCCATGGCATATGCTTTCACTTTGCT +
Preference number: 5 (lower is better)
Translates to: YTTSHSVFNGTLIRD*NLLSNFHGICFHFA
Trigger: AGCAAAGTGAAAGCATATGCCATGGAAATTGGAAAGAAGATTCCAGTCCCTGATCAGTGTACCATTGAAGACACTGTGAGAAGTTGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCCAGCTTGTCATTTCCTaGGCCAAGTGGGTCTATTTC +
Preference number: 5 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGQLVIS*AKWVYF
Trigger: GAAATAGACCCACTTGGCCAAGGAAATGACAAGCTG...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCGTCTTAAACGGCAGCTaGTCATTTCCTTGGCCAAGT +
Preference number: 5 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGVLNGS*SFPWPS
Trigger: ACTTGGCCAAGGAAATGACAAGCTGCCGTTTAAGAC...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTCAGAGCTCTGAGGAATaGCACAGAATGACTCTGAAT +
Preference number: 5 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIQSSEE*HRMTLN
Trigger: ATTCAGAGTCATTCTGTGCAATTCCTCAGAGCTCTG...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392832.6
CDS-3UTR CAA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTGTTGCACATGAAGCATaGCCATGCTCCTGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCVAHEA*PCSCCF
Trigger: GAAACAGCAGGAGCATGGCAATGCTTCATGTGCAAC...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTGAGAGGCTGGCCATCTaGATTTACAACAGTTGCTTT +
Preference number: 5 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIERLAI*IYNSCF
Trigger: AAAGCAACTGTTGTAAATCAAGATGGCCAGCCTCTC...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TGGGAACCATTTTACCATGTGTTAGCCTCAGTTGTAGTAAGAGAGGATCATGTAATTACACTTAGTGCCTaGGGCAGGATATATGTCCAA +
Preference number: 5 (lower is better)
Translates to: WEPFYHVLASVVVREDHVITLSA*GRIYVQ
Trigger: TTGGACATATATCCTGCCCAAGGCACTAAGTGTAAT...TACATGATCCTCTCTTACTACAACTGAGGCTAACACATGGTAAAATGGTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp AGATCACATGGTTGTTCACAAAACTTATTTCCTTGCAGCCGTAGAGCTCATGGCTCCAAGATCACATGGTaGTTCACAAAACTTATTTCC +
Preference number: 5 (lower is better)
Translates to: RSHGCSQNLFPCSRRAHGSKITW*FTKLIS
Trigger: GGAAATAAGTTTTGTGAACAACCATGTGATCTTGGA...GCCATGAGCTCTACGGCTGCAAGGAAATAAGTTTTGTGAACAACCATGTGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCACTTTGAGGTCTTCATaGACACTCTCTGCGTGCTAC +
Preference number: 5 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGTLRSS*TLSACY
Trigger: GTAGCACGCAGAGAGTGTCAATGAAGACCTCAAAGT...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392832.6
CDS-3UTR CAA 90 bp GTTTTTCATACCCCACTGAGTGACGTGTTCCACTCAGTACACAGAGATAAGATCCTGAGAAACACAGATTaGGAAGAATGCTTACAATTC +
Preference number: 5 (lower is better)
Translates to: VFHTPLSDVFHSVHRDKILRNTD*EECLQF
Trigger: GAATTGTAAGCATTCTTCCAAATCTGTGTTTCTCAG...GATCTTATCTCTGTGTACTGAGTGGAACACGTCACTCAGTGGGGTATGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS-3UTR CAA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCATTGACACTCTCTCTTaGCACAGGAATCTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGIDTLS*HRNLWS
Trigger: TGACCAGAGATTCCTGTGCAAAGAGAGAGTGTCAAT...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTGATGAGTTTGATCAGTaGACTTTCTACAGACCCAGA +
Preference number: 5 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIDEFDQ*TFYRPR
Trigger: TCTGGGTCTGTAGAAAGTCAACTGATCAAACTCATC...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTAACCAGTCTGAACAGTaGATGCATGGTGAGGATGAG +
Preference number: 5 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCNQSEQ*MHGEDE
Trigger: CTCATCCTCACCATGCATCAACTGTTCAGACTGGTT...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTCTTGGTATTTTCCAGTaGTCGGGTAAGGAGTTTAGC +
Preference number: 5 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMALGIFQ*SGKEFS
Trigger: GCTAAACTCCTTACCCGACAACTGGAAAATACCAAG...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTATAGAGCCAGGGGTATaGCTCCCTGCATTTATCTTG +
Preference number: 5 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCIEPGV*LPAFIL
Trigger: CAAGATAAATGCAGGGAGCAATACCCCTGGCTCTAT...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTGTCTTAAACGGCAGCTaGTCATTTCCTTGGCCAAGT +
Preference number: 5 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCVLNGS*SFPWPS
Trigger: ACTTGGCCAAGGAAATGACAAGCTGCCGTTTAAGAC...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTCCATGGCTGAGGTTCTaGGCTGATGAGAATAAAACT +
Preference number: 5 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAPWLRF*ADENKT
Trigger: AGTTTTATTCTCATCAGCCAAGAACCTCAGCCATGG...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCCCATGGCTGAGGTTCTaGGCTGATGAGAATAAAACT +
Preference number: 5 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGPWLRF*ADENKT
Trigger: AGTTTTATTCTCATCAGCCAAGAACCTCAGCCATGG...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTCAGAGCTCTGAGGAATaGCACAGAATGACTCTGAAT +
Preference number: 5 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAQSSEE*HRMTLN
Trigger: ATTCAGAGTCATTCTGTGCAATTCCTCAGAGCTCTG...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392832.6
CDS-3UTR CAA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCGCTTTCTCAGGATTGTaGCACATGAAGCATTGCCAT +
Preference number: 5 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGAFSGL*HMKHCH
Trigger: ATGGCAATGCTTCATGTGCAACAATCCTGAGAAAGC...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTGTTGCTTTCTCAGGATaGTTGCACATGAAGCATTGC +
Preference number: 5 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAVAFSG*LHMKHC
Trigger: GCAATGCTTCATGTGCAACAATCCTGAGAAAGCAAC...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCGTTGCTTTCTCAGGATaGTTGCACATGAAGCATTGC +
Preference number: 5 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGVAFSG*LHMKHC
Trigger: GCAATGCTTCATGTGCAACAATCCTGAGAAAGCAAC...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTTCACACTCTGTACTTaGCTGAGTTCTATTGGGCAG +
Preference number: 5 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGFTLCT*LSSIGQ
Trigger: CTGCCCAATAGAACTCAGCAAAGTACAGAGTGTGAA...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTTTCACACTCTGTACTTaGCTGAGTTCTATTGGGCAG +
Preference number: 5 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAFTLCT*LSSIGQ
Trigger: CTGCCCAATAGAACTCAGCAAAGTACAGAGTGTGAA...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp GCCTTTCTGATTTCACTCTTGCCTTTCCACAGACATATTCGCATCATTGCAAGTTTTCTGATTTCACTCTaGCCTTTCCACAGACATATT +
Preference number: 5 (lower is better)
Translates to: AFLISLLPFHRHIRIIASFLISL*PFHRHI
Trigger: AATATGTCTGTGGAAAGGCAAGAGTGAAATCAGAAA...ACTTGCAATGATGCGAATATGTCTGTGGAAAGGCAAGAGTGAAATCAGAAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473907.5
CDS-3UTR CAA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTCAACATGGTGTTACCTaGGAGTATGCTCTTTACTAT +
Preference number: 5 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIQHGVT*EYALYY
Trigger: ATAGTAAAGAGCATACTCCAAGGTAACACCATGTTG...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTTCAGTTACTATGAGCTaGGTTTCTTCCAGTTTCTCA +
Preference number: 5 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGISVTMS*VSSSFS
Trigger: TGAGAAACTGGAAGAAACCAAGCTCATAGTAACTGA...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTCTCCCTGCATTTATCTaGTCTTCAAAAGCCTGGATT +
Preference number: 5 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMALPAFI*SSKAWI
Trigger: AATCCAGGCTTTTGAAGACAAGATAAATGCAGGGAG...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTCAAGTAGAGCTTATCTaGGTATTCTATAGGACTTGC +
Preference number: 5 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIQVELI*VFYRTC
Trigger: GCAAGTCCTATAGAATACCAAGATAAGCTCTACTTG...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCAGCTTTCTCAGGATTGTaGCACATGAAGCATTGCCAT +
Preference number: 5 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSAFSGL*HMKHCH
Trigger: ATGGCAATGCTTCATGTGCAACAATCCTGAGAAAGC...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCAGAGAGGCTGGCCATCTaGATTTACAACAGTTGCTTT +
Preference number: 5 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSERLAI*IYNSCF
Trigger: AAAGCAACTGTTGTAAATCAAGATGGCCAGCCTCTC...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp GAATCCTGCCATTTTAGGCCCTTCTTCTTAAAGGACAACAATTCCATTGGTATTGAACTTCCATCTGACTaGCTTCTCTTTAAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: ESCHFRPFFLKDNNSIGIELPSD*LLFKFS
Trigger: GGAAAACTTAAAGAGAAGCAAGTCAGATGGAAGTTC...AATACCAATGGAATTGTTGTCCTTTAAGAAGAAGGGCCTAAAATGGCAGGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TGTGATTCTTGTGATACAGATTTCAACTACTGCCTGGTCATTGTTATTGGTTTGACTTTGAGGTCTTCATaGACACTCTCTTGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: CDSCDTDFNYCLVIVIGLTLRSS*TLSCPL
Trigger: AAGAGGACAAGAGAGTGTCAATGAAGACCTCAAAGT...CAAACCAATAACAATGACCAGGCAGTAGTTGAAATCTGTATCACAAGAATCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473907.5
ENST00000475050.5
CDS-3UTR CAA 90 bp TTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTATTTTTCTCCAGACTTaGAGGTCTTCATTGACACTC +
Preference number: 5 (lower is better)
Translates to: FLTLAMIIQCLWCIIVMAIFLQT*RSSLTL
Trigger: GAGTGTCAATGAAGACCTCAAAGTCTGGAGAAAAAT...AGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTGATGAGTTTGATCAGTaGACTTTCTACAGACCCAGA +
Preference number: 5 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCDEFDQ*TFYRPR
Trigger: TCTGGGTCTGTAGAAAGTCAACTGATCAAACTCATC...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCAGATGAGTTTGATCAGTaGACTTTCTACAGACCCAGA +
Preference number: 5 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSDEFDQ*TFYRPR
Trigger: TCTGGGTCTGTAGAAAGTCAACTGATCAAACTCATC...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTTATCAGATGCGATTTTaGCATGAGGAGTGTCTTCGT +
Preference number: 5 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCYQMRF*HEECLR
Trigger: ACGAAGACACTCCTCATGCAAAAATCGCATCTGATA...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCCAACATGGTGTTACCTaGGAGTATGCTCTTTACTAT +
Preference number: 5 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGQHGVT*EYALYY
Trigger: ATAGTAAAGAGCATACTCCAAGGTAACACCATGTTG...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTCAGTTACTATGAGCTaGGTTTCTTCCAGTTTCTCA +
Preference number: 5 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGSVTMS*VSSSFS
Trigger: TGAGAAACTGGAAGAAACCAAGCTCATAGTAACTGA...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCAGCCTGGATTTTAACTaGGAGTTTTTCATGGTCTTC +
Preference number: 5 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGSLDFN*EFFMVF
Trigger: GAAGACCATGAAAAACTCCAAGTTAAAATCCAGGCT...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCCAAGTAGAGCTTATCTaGGTATTCTATAGGACTTGC +
Preference number: 5 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGQVELI*VFYRTC
Trigger: GCAAGTCCTATAGAATACCAAGATAAGCTCTACTTG...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCCTTGATTTACAACAGTaGCTTTCTCAGGATTGTTGC +
Preference number: 5 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGLDLQQ*LSQDCC
Trigger: GCAACAATCCTGAGAAAGCAACTGTTGTAAATCAAG...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp TTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCGAACTTCCATCTGACTaGCTTCTCTTTAAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: FLDIGNDNTMPVVYNCHGELPSD*LLFKFS
Trigger: GGAAAACTTAAAGAGAAGCAAGTCAGATGGAAGTTC...GCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTATTACACTTAGTGCCTaGGGCAGGATATATGTCCAA +
Preference number: 5 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCITLSA*GRIYVQ
Trigger: TTGGACATATATCCTGCCCAAGGCACTAAGTGTAAT...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS TCA 90 bp ATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCATGGCTaGCTTATAAATCCCTACAGATATGTGGTTACTTCTCTACTTTCC +
Preference number: 5 (lower is better)
Translates to: IGNDNTMPVVYNCHG*LINPYRYVVTSLLS
Trigger: GGAAAGTAGAGAAGTAACCACATATCTGTAGGGATTTATAAGTCAGCCATGACAATTATACACCACAGGCATTGTATTATCATTGCCAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCAATTTTTCTCCAGACTTaGAGGTCTTCATTGACACTC +
Preference number: 5 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSIFLQT*RSSLTL
Trigger: GAGTGTCAATGAAGACCTCAAAGTCTGGAGAAAAAT...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCTTGATTTACAACAGTaGCTTTCTCAGGATTGTTGC +
Preference number: 5 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCLDLQQ*LSQDCC
Trigger: GCAACAATCCTGAGAAAGCAACTGTTGTAAATCAAG...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS-3UTR CAA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCAGAACTTCCATCTGACTaGCTTCTCTTTAAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSELPSD*LLFKFS
Trigger: GGAAAACTTAAAGAGAAGCAAGTCAGATGGAAGTTC...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTCCAAGGCATGGATTATaGAGAATCACTCTAGAATTC +
Preference number: 5 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCPRHGL*RITLEF
Trigger: GAATTCTAGAGTGATTCTCAATAATCCATGCCTTGG...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp AGGATTATACCAAGGCATGGATTATTGAGAATCACTCTAGAATTCTGTCTATCATTTTGCCATATTCTGTaGGTTAGAAGCAGGTTACAT +
Preference number: 5 (lower is better)
Translates to: RIIPRHGLLRITLEFCLSFCHIL*VRSRLH
Trigger: ATGTAACCTGCTTCTAACCAACAGAATATGGCAAAA...TGATAGACAGAATTCTAGAGTGATTCTCAATAATCCATGCCTTGGTATAATCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS-3UTR CAA 90 bp GCTCTTTTTCTTGACATTGGCAATGATAATACAATGCCTGTGGTGTATAATTGTTCCAAGATCACATGGTaGTTCACAAAACTTATTTCC +
Preference number: 5 (lower is better)
Translates to: ALFLDIGNDNTMPVVYNCSKITW*FTKLIS
Trigger: GGAAATAAGTTTTGTGAACAACCATGTGATCTTGGA...ACAATTATACACCACAGGCATTGTATTATCATTGCCAATGTCAAGAAAAAGAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362010.7
ENST00000392833.6
CDS GCA 72 bp TTGCGGAGCCGGTGCCGGGTGGAAGAATTCAAGGAATaGAGCCTGATGCCACCGGCAGCCCCAGAGACCGGT +
Preference number: 6 (lower is better)
Translates to: LRSRCRVEEFKE*SLMPPAAPETG
Trigger: ACCGGTCTCTGGGGCTGCCGGTGGCATCAGGCTGCATTCCTTGAATTCTTCCACCCGGCACCGGCTCCGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461299.5
ENST00000494677.5
CDS CAA 90 bp GTGCTACTCCTCAAAGGCGCCCTTGCAGTTACTCAGCTGCATGGTTaGAGACTGGGCGGGAGATTCAGGCAGGCTCCGAGGGCACAGCGA +
Preference number: 6 (lower is better)
Translates to: VLLLKGALAVTQLHG*RLGGRFRQAPRAQR
Trigger: TCGCTGTGCCCTCGGAGCCTGCCTGAATCTCCCGCCCAGTCTCAAACCATGCAGCTGAGTAACTGCAAGGGCGCCTTTGAGGAGTAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392832.6
ENST00000461299.5
ENST00000483440.1
ENST00000494677.5
CDS TCA 72 bp TCAAAGGCGCCCTTGCAGTTACTCAGCTGCATGGTTTaGGACTGGGCGGGAGATTCAGGCAGGCTCCGAGGG +
Preference number: 6 (lower is better)
Translates to: SKAPLQLLSCMV*DWAGDSGRLRG
Trigger: CCCTCGGAGCCTGCCTGAATCTCCCGCCCAGTCTCAAACCATGCAGCTGAGTAACTGCAAGGGCGCCTTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392832.6
ENST00000461299.5
ENST00000483440.1
ENST00000494677.5
CDS CCA 72 bp GCGGGAGATTCAGGCAGGCTCCGAGGGCACAGCGAGTaGAATCCGCTCAGCTCAGTGAACCTGAAGTTGTTC +
Preference number: 6 (lower is better)
Translates to: AGDSGRLRGHSE*NPLSSVNLKLF
Trigger: GAACAACTTCAGGTTCACTGAGCTGAGCGGATTCCACTCGCTGTGCCCTCGGAGCCTGCCTGAATCTCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392832.6
ENST00000461299.5
ENST00000483440.1
ENST00000494677.5
CDS CAA 72 bp CTCAAAGGCGCCCTTGCAGTTACTCAGCTGCATGGTTaGAGACTGGGCGGGAGATTCAGGCAGGCTCCGAGG +
Preference number: 6 (lower is better)
Translates to: LKGALAVTQLHG*RLGGRFRQAPR
Trigger: CCTCGGAGCCTGCCTGAATCTCCCGCCCAGTCTCAAACCATGCAGCTGAGTAACTGCAAGGGCGCCTTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392832.6
ENST00000461299.5
ENST00000483440.1
ENST00000494677.5
CDS GCA 72 bp ACAGGCTGCACCTCACCCAGCGGAGTTACCTCCCAGTaGAACGCTCTGTTTCCGTGCGGAATCAGGCAAATG +
Preference number: 6 (lower is better)
Translates to: TGCTSPSGVTSQ*NALFPCGIRQM
Trigger: CATTTGCCTGATTCCGCACGGAAACAGAGCGTTGCACTGGGAGGTAACTCCGCTGGGTGAGGTGCAGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494677.5
CDS CCA 72 bp ACTCCTCAAAGGCGCCCTTGCAGTTACTCAGCTGCATaGTTTGAGACTGGGCGGGAGATTCAGGCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: TPQRRPCSYSAA*FETGREIQAGS
Trigger: GGAGCCTGCCTGAATCTCCCGCCCAGTCTCAAACCATGCAGCTGAGTAACTGCAAGGGCGCCTTTGAGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392832.6
ENST00000461299.5
ENST00000483440.1
ENST00000494677.5
CDS CAA 72 bp TCGAAAGCCCGGGGGAGAGAGCGGTCCCTGCGTTTCTaGGCCACAGCCTTCACACTCTGTACTTTGCTGAGT +
Preference number: 6 (lower is better)
Translates to: SKARGRERSLRF*ATAFTLCTLLS
Trigger: ACTCAGCAAAGTACAGAGTGTGAAGGCTGTGGCCAAGAAACGCAGGGACCGCTCTCTCCCCCGGGCTTTCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS CAA 90 bp CGAGGGCACAGCGAGTGGAATCCGCTCAGCTCAGTGAACCTGAAGTaGTTCATTGCGGAGCCGGTGCCGGGTGGAAGAATTCAAGGAATG +
Preference number: 6 (lower is better)
Translates to: RGHSEWNPLSSVNLK*FIAEPVPGGRIQGM
Trigger: CATTCCTTGAATTCTTCCACCCGGCACCGGCTCCGCAATGAACAACTTCAGGTTCACTGAGCTGAGCGGATTCCACTCGCTGTGCCCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461299.5
ENST00000494677.5
CDS GCA 72 bp ACAGGCTGCACCTCACCCAGCGGAGTTACCTCCCAGTaGAACGCTCTGTTTCCTGAGGTGAAACACAAAGCC +
Preference number: 6 (lower is better)
Translates to: TGCTSPSGVTSQ*NALFPEVKHKA
Trigger: GGCTTTGTGTTTCACCTCAGGAAACAGAGCGTTGCACTGGGAGGTAACTCCGCTGGGTGAGGTGCAGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461299.5
CDS GCA 72 bp TTCCAAGCAGGAGTCCCAGAGCCCCACAAGGGCCTTTaGATGCTTTTCAATGGACTCGGTCTCTCTGATGGC +
Preference number: 6 (lower is better)
Translates to: FQAGVPEPHKGL*MLFNGLGLSDG
Trigger: GCCATCAGAGAGACCGAGTCCATTGAAAAGCATGCAAAGGCCCTTGTGGGGCTCTGGGACTCCTGCTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000468233.5
ENST00000479987.5
ENST00000482434.1
ENST00000487753.5
ENST00000490235.5
ENST00000494677.5
ENST00000537559.5
CDS CAA 72 bp AGCGAGTGGAATCCGCTCAGCTCAGTGAACCTGAAGTaGTTCATTGCGGAGCCGGTGCCGGGTGGAAGAATT +
Preference number: 6 (lower is better)
Translates to: SEWNPLSSVNLK*FIAEPVPGGRI
Trigger: AATTCTTCCACCCGGCACCGGCTCCGCAATGAACAACTTCAGGTTCACTGAGCTGAGCGGATTCCACTCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461299.5
ENST00000483440.1
ENST00000494677.5
CDS TCA 72 bp CAGCGGAGTTACCTCCCAGTGCAACGCTCTGTTTCCTaGGGTGAAACACAAAGCCTTGTCCTCTTTGCCTGC +
Preference number: 6 (lower is better)
Translates to: QRSYLPVQRSVS*GETQSLVLFAC
Trigger: GCAGGCAAAGAGGACAAGGCTTTGTGTTTCACCTCAGGAAACAGAGCGTTGCACTGGGAGGTAACTCCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461299.5
CDS GCA 72 bp AAGCAGGAGTCCCAGAGCCCCACAAGGGCCTTTGCATaGTTTTCAATGGACTCGGTCTCTCTGATGGCTGTT +
Preference number: 6 (lower is better)
Translates to: KQESQSPTRAFA*FSMDSVSLMAV
Trigger: AACAGCCATCAGAGAGACCGAGTCCATTGAAAAGCATGCAAAGGCCCTTGTGGGGCTCTGGGACTCCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000468233.5
ENST00000479987.5
ENST00000482434.1
ENST00000487753.5
ENST00000490235.5
ENST00000494677.5
ENST00000537559.5
CDS CCA 72 bp CCAGCAGGAGAATATGGTGAAACGAATGCTCCATGTTaGCCAGTTGGCTCACCAGGTATGTCAGGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: PAGEYGETNAPC*PVGSPGMSGSS
Trigger: GGAGCTGCCTGACATACCTGGTGAGCCAACTGGCCAACATGGAGCATTCGTTTCACCATATTCTCCTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000482685.5
ENST00000488772.1
CDS CAA 90 bp CTCCAGCAGGAGAATATGGTGAAACGAATGCTCCATGTTGGCCAGTaGGCTCACCAGGTATGTCAGGCAGCTCCTGGCTCTCTCTTCATC +
Preference number: 6 (lower is better)
Translates to: LQQENMVKRMLHVGQ*AHQVCQAAPGSLFI
Trigger: GATGAAGAGAGAGCCAGGAGCTGCCTGACATACCTGGTGAGCCAACTGGCCAACATGGAGCATTCGTTTCACCATATTCTCCTGCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000482685.5
CDS TCA 72 bp GAGTTACCTCCCAGTGCAACGCTCTGTTTCCTGAGGTaGAACACAAAGCCTTGTCCTCTTTGCCTGCCAGAC +
Preference number: 6 (lower is better)
Translates to: ELPPSATLCFLR*NTKPCPLCLPD
Trigger: GTCTGGCAGGCAAAGAGGACAAGGCTTTGTGTTTCACCTCAGGAAACAGAGCGTTGCACTGGGAGGTAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461299.5
CDS GCA 72 bp GACAGGCACACCCTGTCATTTCCCAGTAGCCAGCCCTaGAGTTCTTACACCTGGCTTTATGCAAGCACAGAA +
Preference number: 6 (lower is better)
Translates to: DRHTLSFPSSQP*SSYTWLYASTE
Trigger: TTCTGTGCTTGCATAAAGCCAGGTGTAAGAACTGCAGGGCTGGCTACTGGGAAATGACAGGGTGTGCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469007.1
CDS GCA 72 bp GAATCCGCTCAGCTCAGTGAACCTGAAGTTGTTCATTaGGGAGCCGGTGCCGGGTGGAAGAATTCAAGGAAT +
Preference number: 6 (lower is better)
Translates to: ESAQLSEPEVVH*GAGAGWKNSRN
Trigger: ATTCCTTGAATTCTTCCACCCGGCACCGGCTCCGCAATGAACAACTTCAGGTTCACTGAGCTGAGCGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461299.5
ENST00000494677.5
CDS CCA 72 bp GTTCCTTGTTGCCTCTGTGGAGGAATTTCACTGCAATaGGGATGGCTAATGCCATCACTGGGGGTCGGTTGT +
Preference number: 6 (lower is better)
Translates to: VPCCLCGGISLQ*GWLMPSLGVGC
Trigger: ACAACCGACCCCCAGTGATGGCATTAGCCATCCCCATTGCAGTGAAATTCCTCCACAGAGGCAACAAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000468233.5
ENST00000479987.5
ENST00000482434.1
ENST00000487753.5
ENST00000490235.5
ENST00000494677.5
ENST00000537559.5
CDS CAA 72 bp GAGAATATGGTGAAACGAATGCTCCATGTTGGCCAGTaGGCTCACCAGGTATGTCAGGCAGCTCCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: ENMVKRMLHVGQ*AHQVCQAAPGS
Trigger: AGAGCCAGGAGCTGCCTGACATACCTGGTGAGCCAACTGGCCAACATGGAGCATTCGTTTCACCATATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000482685.5
ENST00000488772.1
CDS CAA 72 bp CTTGAGAGTCTCCTCCCGCCAGCTGTGGAAAGAACTTaGCGTCTCTCCAGCAATGCATCTCCTTGCGATTCT +
Preference number: 6 (lower is better)
Translates to: LESLLPPAVERT*RLSSNASPCDS
Trigger: AGAATCGCAAGGAGATGCATTGCTGGAGAGACGCAAAGTTCTTTCCACAGCTGGCGGGAGGAGACTCTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482685.5
CDS CAA 90 bp CAATCCAGCCTCCACTTCTCTCCTAACCTCATCTCCCTTTCCACATaGTTCCCTTCACTACAGCCACACCGACCTCAGAAACTCCAGCCT +
Preference number: 6 (lower is better)
Translates to: QSSLHFSPNLISLST*FPSLQPHRPQKLQP
Trigger: AGGCTGGAGTTTCTGAGGTCGGTGTGGCTGTAGTGAAGGGAACAATGTGGAAAGGGAGATGAGGTTAGGAGAGAAGTGGAGGCTGGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482434.1
CDS CAA 90 bp GAGCGGTCCCTGCGTTTCTTGGCCACAGCCTTCACACTCTGTACTTaGCTGAGTTCTATTGGGCAGTCGTCAGGGTCATCTTTAGACTTT +
Preference number: 6 (lower is better)
Translates to: ERSLRFLATAFTLCT*LSSIGQSSGSSLDF
Trigger: AAAGTCTAAAGATGACCCTGACGACTGCCCAATAGAACTCAGCAAAGTACAGAGTGTGAAGGCTGTGGCCAAGAAACGCAGGGACCGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS TCA 72 bp AGCCGTAGTAGATGGTACTGTTCTGGCTGTTCCAGCTaGGACATCAAGGCCAGGAGTTCTGTCAGGTGTCTA +
Preference number: 6 (lower is better)
Translates to: SRSRWYCSGCSS*DIKARSSVRCL
Trigger: TAGACACCTGACAGAACTCCTGGCCTTGATGTCTCAGCTGGAACAGCCAGAACAGTACCATCTACTACGGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000469007.1
ENST00000479987.5
ENST00000482685.5
CDS TCA 72 bp CATGCGGAAGATGTCTCTGCTCTGAGGGCCCAAGATTaGGGAGAAGGTGTCGGTGATGCTTTTAATCTCCAG +
Preference number: 6 (lower is better)
Translates to: HAEDVSALRAQD*GEGVGDAFNLQ
Trigger: CTGGAGATTAAAAGCATCACCGACACCTTCTCCTCAATCTTGGGCCCTCAGAGCAGAGACATCTTCCGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000488772.1
CDS TCA 72 bp GCTAGCTTTAGGGGCAGCTGGTTGAAGAGGCCCAAATaGAGTCATCAGGTTTCTTGGTGGCAGAATGGCAAC +
Preference number: 6 (lower is better)
Translates to: ASFRGSWLKRPK*SHQVSWWQNGN
Trigger: GTTGCCATTCTGCCACCAAGAAACCTGATGACTTCATTTGGGCCTCTTCAACCAGCTGCCCCTAAAGCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489602.1
CDS TCA 72 bp GAAGGGTGGAGCTTGCTAGCTTTAGGGGCAGCTGGTTaGAGAGGCCCAAATGAAGTCATCAGGTTTCTTGGT +
Preference number: 6 (lower is better)
Translates to: EGWSLLALGAAG*RGPNEVIRFLG
Trigger: ACCAAGAAACCTGATGACTTCATTTGGGCCTCTTCAACCAGCTGCCCCTAAAGCTAGCAAGCTCCACCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489602.1
CDS GCA 72 bp AGACCATGTTACTTCTGCTCAGAACTCTCCAGTGGCTaGCCAAGACTCCAACAATCCAGCCTCCACTTCTCT +
Preference number: 6 (lower is better)
Translates to: RPCYFCSELSSG*PRLQQSSLHFS
Trigger: AGAGAAGTGGAGGCTGGATTGTTGGAGTCTTGGGCAGCCACTGGAGAGTTCTGAGCAGAAGTAACATGGTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482434.1
CDS CAA 72 bp CTGCGTTTCTTGGCCACAGCCTTCACACTCTGTACTTaGCTGAGTTCTATTGGGCAGTCGTCAGGGTCATCT +
Preference number: 6 (lower is better)
Translates to: LRFLATAFTLCT*LSSIGQSSGSS
Trigger: AGATGACCCTGACGACTGCCCAATAGAACTCAGCAAAGTACAGAGTGTGAAGGCTGTGGCCAAGAAACGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS TCA 72 bp TGGTATGTCTCCCCTGTTTTCATCTTCGCCGTCATCTaGACCCACACCCTTTGTGAGCATAGTGTGGAAAGC +
Preference number: 6 (lower is better)
Translates to: WYVSPVFIFAVI*THTLCEHSVES
Trigger: GCTTTCCACACTATGCTCACAAAGGGTGTGGGTTCAGATGACGGCGAAGATGAAAACAGGGGAGACATACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000472419.1
CDS CCA 72 bp TGTTGCCTCTGTGGAGGAATTTCACTGCAATGGGGATaGCTAATGCCATCACTGGGGGTCGGTTGTAATTCT +
Preference number: 6 (lower is better)
Translates to: CCLCGGISLQWG*LMPSLGVGCNS
Trigger: AGAATTACAACCGACCCCCAGTGATGGCATTAGCCATCCCCATTGCAGTGAAATTCCTCCACAGAGGCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000468233.5
ENST00000479987.5
ENST00000482434.1
ENST00000487753.5
ENST00000490235.5
ENST00000494677.5
ENST00000537559.5
CDS CCA 72 bp AGCCTTGTCCTCTTTGCCTGCCAGACTTCTAAATGGTaGATTCCTCCCTGTTTAGTTTCGGGCTCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: SLVLFACQTSKW*IPPCLVSGSLL
Trigger: GAGAAGAGAGCCCGAAACTAAACAGGGAGGAATCCACCATTTAGAAGTCTGGCAGGCAAAGAGGACAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461299.5
CDS CCA 72 bp CACCTTGTCCTCTTTGCCTGCCAGACTTCTAAATGGTaGATTCCTCCCTGTTTAGTTTCGGGCTCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: HLVLFACQTSKW*IPPCLVSGSLL
Trigger: GAGAAGAGAGCCCGAAACTAAACAGGGAGGAATCCACCATTTAGAAGTCTGGCAGGCAAAGAGGACAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489602.1
CDS CAA 72 bp CTCCACTTCTCTCCTAACCTCATCTCCCTTTCCACATaGTTCCCTTCACTACAGCCACACCGACCTCAGAAA +
Preference number: 6 (lower is better)
Translates to: LHFSPNLISLST*FPSLQPHRPQK
Trigger: TTTCTGAGGTCGGTGTGGCTGTAGTGAAGGGAACAATGTGGAAAGGGAGATGAGGTTAGGAGAGAAGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482434.1
CDS CAA 90 bp GACTCCCCCAGCTGTGATCTCTCAGTGTCTGTCTTAAACGGCAGCTaGTCATTTCCTTGGCCAAGTGGGTCTATTTCTGAAAGAGAGATG +
Preference number: 6 (lower is better)
Translates to: DSPSCDLSVSVLNGS*SFPWPSGSISEREM
Trigger: CATCTCTCTTTCAGAAATAGACCCACTTGGCCAAGGAAATGACAAGCTGCCGTTTAAGACAGACACTGAGAGATCACAGCTGGGGGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000472419.1
CDS CAA 90 bp GTTACTTCTCTACTTTCCCTTTCTTTGGCTTGGGCAACTGCCACGTaGATGCACTGGAGCCATTCTTCTGCATTCTTCTCATCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: VTSLLSLSLAWATAT*MHWSHSSAFFSSLA
Trigger: GGCCAAGGATGAGAAGAATGCAGAAGAATGGCTCCAGTGCATCAACGTGGCAGTTGCCCAAGCCAAAGAAAGGGAAAGTAGAGAAGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS CAA 90 bp GGCTTTATGCAAGCACAGAAGGTGAGGCATAAGCCAATCAATAACTaGTGTGATTCCAGGCCGTCTCTACCCCCATGGCCAAATTCTGGA +
Preference number: 6 (lower is better)
Translates to: GFMQAQKVRHKPINN*CDSRPSLPPWPNSG
Trigger: TCCAGAATTTGGCCATGGGGGTAGAGACGGCCTGGAATCACACAAGTTATTGATTGGCTTATGCCTCACCTTCTGTGCTTGCATAAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469007.1
CDS TCA 72 bp TCGGTGATGCTTTTAATCTCCAGCAGGAGAATATGGTaGAACGAATGCTCCATGTTGGCCAGTTGGCTCACC +
Preference number: 6 (lower is better)
Translates to: SVMLLISSRRIW*NECSMLASWLT
Trigger: GGTGAGCCAACTGGCCAACATGGAGCATTCGTTTCACCATATTCTCCTGCTGGAGATTAAAAGCATCACCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000482685.5
ENST00000488772.1
CDS TCA 72 bp CAGCTTGTCATTTCCTTGGCCAAGTGGGTCTATTTCTaGAAGAGAGATGCTGGCTGGTATGTCTCCCCTGTT +
Preference number: 6 (lower is better)
Translates to: QLVISLAKWVYF*KRDAGWYVSPV
Trigger: AACAGGGGAGACATACCAGCCAGCATCTCTCTTTCAGAAATAGACCCACTTGGCCAAGGAAATGACAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000472419.1
CDS GCA 72 bp TTCCGTGTGATCAGCCAGGAGATCTGCCTTGGTAATTaGAGCCAGAGACAGGTAGTTAGACATATTCCTGCA +
Preference number: 6 (lower is better)
Translates to: FRVISQEICLGN*SQRQVVRHIPA
Trigger: TGCAGGAATATGTCTAACTACCTGTCTCTGGCTGCAATTACCAAGGCAGATCTCCTGGCTGATCACACGGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000468233.5
ENST00000479987.5
ENST00000482434.1
ENST00000490235.5
ENST00000494677.5
ENST00000537559.5
CDS GCA 72 bp GGCAACTGCCACGTTGATGCACTGGAGCCATTCTTCTaGATTCTTCTCATCCTTGGCCTTAAAGACATAGGT +
Preference number: 6 (lower is better)
Translates to: GNCHVDALEPFF*ILLILGLKDIG
Trigger: ACCTATGTCTTTAAGGCCAAGGATGAGAAGAATGCAGAAGAATGGCTCCAGTGCATCAACGTGGCAGTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS CCA 72 bp AATAACTTGTGTGATTCCAGGCCGTCTCTACCCCCATaGCCAAATTCTGGACTGAAGATTGCAAACCCACAG +
Preference number: 6 (lower is better)
Translates to: NNLCDSRPSLPP*PNSGLKIANPQ
Trigger: CTGTGGGTTTGCAATCTTCAGTCCAGAATTTGGCCATGGGGGTAGAGACGGCCTGGAATCACACAAGTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469007.1
CDS CCA 72 bp TCTCTTGTCCTCTTTGCCTGCCAGACTTCTAAATGGTaGATTCCTCCCTGTTTAGTTTCGGGCTCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: SLVLFACQTSKW*IPPCLVSGSLL
Trigger: GAGAAGAGAGCCCGAAACTAAACAGGGAGGAATCCACCATTTAGAAGTCTGGCAGGCAAAGAGGACAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473907.5
ENST00000475050.5
ENST00000487753.5
CDS CCA 72 bp ATCCTTGTCCTCTTTGCCTGCCAGACTTCTAAATGGTaGATTCCTCCCTGTTTAGTTTCGGGCTCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: ILVLFACQTSKW*IPPCLVSGSLL
Trigger: GAGAAGAGAGCCCGAAACTAAACAGGGAGGAATCCACCATTTAGAAGTCTGGCAGGCAAAGAGGACAAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479987.5
CDS CAA 72 bp CTACTTTCCCTTTCTTTGGCTTGGGCAACTGCCACGTaGATGCACTGGAGCCATTCTTCTGCATTCTTCTCA +
Preference number: 6 (lower is better)
Translates to: LLSLSLAWATAT*MHWSHSSAFFS
Trigger: TGAGAAGAATGCAGAAGAATGGCTCCAGTGCATCAACGTGGCAGTTGCCCAAGCCAAAGAAAGGGAAAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS CAA 90 bp TCCCTACAGATATGTGGTTACTTCTCTACTTTCCCTTTCTTTGGCTaGGGCAACTGCCACGTTGATGCACTGGAGCCATTCTTCTGCATT +
Preference number: 6 (lower is better)
Translates to: SLQICGYFSTFPFFG*GNCHVDALEPFFCI
Trigger: AATGCAGAAGAATGGCTCCAGTGCATCAACGTGGCAGTTGCCCAAGCCAAAGAAAGGGAAAGTAGAGAAGTAACCACATATCTGTAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS TCA 72 bp AAGGCCAGGAGTTCTGTCAGGTGTCTATTAATTGGCTaGGGCTGCTTTTCATACACAGCAGGTAACACTCTC +
Preference number: 6 (lower is better)
Translates to: KARSSVRCLLIG*GCFSYTAGNTL
Trigger: GAGAGTGTTACCTGCTGTGTATGAAAAGCAGCCTCAGCCAATTAATAGACACCTGACAGAACTCCTGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000479987.5
ENST00000482685.5
CDS GCA 72 bp TACTTCTCTACTTTCCCTTTCTTTGGCTTGGGCAACTaGCACGTTGATGCACTGGAGCCATTCTTCTGCATT +
Preference number: 6 (lower is better)
Translates to: YFSTFPFFGLGN*HVDALEPFFCI
Trigger: AATGCAGAAGAATGGCTCCAGTGCATCAACGTGGCAGTTGCCCAAGCCAAAGAAAGGGAAAGTAGAGAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS CCA 72 bp TATGTGGTTACTTCTCTACTTTCCCTTTCTTTGGCTTaGGCAACTGCCACGTTGATGCACTGGAGCCATTCT +
Preference number: 6 (lower is better)
Translates to: YVVTSLLSLSLA*ATATLMHWSHS
Trigger: AGAATGGCTCCAGTGCATCAACGTGGCAGTTGCCCAAGCCAAAGAAAGGGAAAGTAGAGAAGTAACCACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS CAA 72 bp ATATGTGGTTACTTCTCTACTTTCCCTTTCTTTGGCTaGGGCAACTGCCACGTTGATGCACTGGAGCCATTC +
Preference number: 6 (lower is better)
Translates to: ICGYFSTFPFFG*GNCHVDALEPF
Trigger: GAATGGCTCCAGTGCATCAACGTGGCAGTTGCCCAAGCCAAAGAAAGGGAAAGTAGAGAAGTAACCACATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS CAA 90 bp ATATCTCCCAAAACATGTCCCCAAGCTCAACTTTCGCACCATACCTaGGAGTATGCTCTTTACTATAACTTCCGTGTGATCAGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: ISPKTCPQAQLSHHT*EYALYYNFRVISQE
Trigger: CTCCTGGCTGATCACACGGAAGTTATAGTAAAGAGCATACTCCAAGGTATGGTGCGAAAGTTGAGCTTGGGGACATGTTTTGGGAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000482434.1
ENST00000494677.5
CDS TCA 72 bp TTACCTTGGAGTATGCTCTTTACTATAACTTCCGTGTaGTCAGCCAGGAGATCTGCCTTGGTAATTGCAGCC +
Preference number: 6 (lower is better)
Translates to: LPWSMLFTITSV*SARRSALVIAA
Trigger: GGCTGCAATTACCAAGGCAGATCTCCTGGCTGATCACACGGAAGTTATAGTAAAGAGCATACTCCAAGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000479987.5
CDS TCA 72 bp ATACCTTGGAGTATGCTCTTTACTATAACTTCCGTGTaGTCAGCCAGGAGATCTGCCTTGGTAATTGCAGCC +
Preference number: 6 (lower is better)
Translates to: IPWSMLFTITSV*SARRSALVIAA
Trigger: GGCTGCAATTACCAAGGCAGATCTCCTGGCTGATCACACGGAAGTTATAGTAAAGAGCATACTCCAAGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000482434.1
ENST00000494677.5
CDS TCA 72 bp CAAACTTGGAGTATGCTCTTTACTATAACTTCCGTGTaGTCAGCCAGGAGATCTGCCTTGGTAATTGCAGCC +
Preference number: 6 (lower is better)
Translates to: QTWSMLFTITSV*SARRSALVIAA
Trigger: GGCTGCAATTACCAAGGCAGATCTCCTGGCTGATCACACGGAAGTTATAGTAAAGAGCATACTCCAAGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490235.5
ENST00000537559.5
CDS GCA 72 bp TGCTTTCTCAGGATTGTTGCACATGAAGCATTGCCATaGTCCTGCTGTTTCACTGAAGCCAAACACGTCAAA +
Preference number: 6 (lower is better)
Translates to: CFLRIVAHEALP*SCCFTEAKHVK
Trigger: TTTGACGTGTTTGGCTTCAGTGAAACAGCAGGAGCATGGCAATGCTTCATGTGCAACAATCCTGAGAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS CCA 72 bp GCCCAAATGAAGTCATCAGGTTTCTTGGTGGCAGAATaGCAACAGCAACCAGATATTACACCTTGTCCTCTT +
Preference number: 6 (lower is better)
Translates to: AQMKSSGFLVAE*QQQPDITPCPL
Trigger: AAGAGGACAAGGTGTAATATCTGGTTGCTGTTGCCATTCTGCCACCAAGAAACCTGATGACTTCATTTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489602.1
CDS CAA 72 bp AACAGTTGCTTTCTCAGGATTGTTGCACATGAAGCATaGCCATGCTCCTGCTGTTTCACTGAAGCCAAACAC +
Preference number: 6 (lower is better)
Translates to: NSCFLRIVAHEA*PCSCCFTEAKH
Trigger: GTGTTTGGCTTCAGTGAAACAGCAGGAGCATGGCAATGCTTCATGTGCAACAATCCTGAGAAAGCAACTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS CAA 90 bp AACCAGTCTGAACAGTTGATGCATGGTGAGGATGAGTTTGATCAGTaGACTTTCTACAGACCCAGAGTCATGTGTTCCAGTTATCAGAGG +
Preference number: 6 (lower is better)
Translates to: NQSEQLMHGEDEFDQ*TFYRPRVMCSSYQR
Trigger: CCTCTGATAACTGGAACACATGACTCTGGGTCTGTAGAAAGTCAACTGATCAAACTCATCCTCACCATGCATCAACTGTTCAGACTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000461299.5
ENST00000468233.5
ENST00000473907.5
ENST00000475050.5
ENST00000483440.1
ENST00000487753.5
ENST00000489602.1
ENST00000494677.5
ENST00000537559.5
CDS CAA 90 bp AAAGGTCATTTTTCTCCAGACTTTGAGGTCTTCATTGACACTCTCTaGTCCTCTTTGCCTGCCAGACTTCTAAATGGTGGATTCCTCCCT +
Preference number: 6 (lower is better)
Translates to: KGHFSPDFEVFIDTL*SSLPARLLNGGFLP
Trigger: AGGGAGGAATCCACCATTTAGAAGTCTGGCAGGCAAAGAGGACAAGAGAGTGTCAATGAAGACCTCAAAGTCTGGAGAAAAATGACCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000473907.5
ENST00000475050.5
ENST00000487753.5
CDS GCA 72 bp CTTGCCTTTCCACAGACATATTCGCATCATTGCAAGTaGAGGAGAAGCCACCTATTTTTCAGCAATCTTCTG +
Preference number: 6 (lower is better)
Translates to: LAFPQTYSHHCK*RRSHLFFSNLL
Trigger: CAGAAGATTGCTGAAAAATAGGTGGCTTCTCCTGCACTTGCAATGATGCGAATATGTCTGTGGAAAGGCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473907.5
CDS GCA 72 bp AACAGCAACCAGATATTACACCTTGTCCTCTTTGCCTaGCAGACTTCTAAATGGTGGATTCCTCCCTGTTTA +
Preference number: 6 (lower is better)
Translates to: NSNQILHLVLFA*QTSKWWIPPCL
Trigger: TAAACAGGGAGGAATCCACCATTTAGAAGTCTGGCAGGCAAAGAGGACAAGGTGTAATATCTGGTTGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489602.1
CDS CAA 90 bp CATCTGCCTTGGGAAGGGACACAGACAGCCAGATTAAGTAACCTTTaGCATGTTCACAGGTCAACTGGCAGCAAAACAGAGAAATTAATT +
Preference number: 6 (lower is better)
Translates to: HLPWEGTQTARLSNL*HVHRSTGSKTEKLI
Trigger: AATTAATTTCTCTGTTTTGCTGCCAGTTGACCTGTGAACATGCAAAAGGTTACTTAATCTGGCTGTCTGTGTCCCTTCCCAAGGCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468233.5
ENST00000494677.5
CDS TCA 72 bp AAAATGCAACTCATGATATCAGATGCGATTTTTGCATaGGGAGTGTCTTCGTCTTTCCCAAAGGGTCTCAGG +
Preference number: 6 (lower is better)
Translates to: KMQLMISDAIFA*GVSSSFPKGLR
Trigger: CCTGAGACCCTTTGGGAAAGACGAAGACACTCCTCATGCAAAAATCGCATCTGATATCATGAGTTGCATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000468233.5
ENST00000479987.5
ENST00000482434.1
ENST00000487753.5
ENST00000490235.5
ENST00000494677.5
ENST00000537559.5
CDS TCA 72 bp GCTACACAACTTCTCACAGTGTCTTCAATGGTACACTaGTCAGGGACTGGAATCTTCTTTCCAATTTCCATG +
Preference number: 6 (lower is better)
Translates to: ATQLLTVSSMVH*SGTGIFFPISM
Trigger: CATGGAAATTGGAAAGAAGATTCCAGTCCCTGATCAGTGTACCATTGAAGACACTGTGAGAAGTTGTGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS TCA 72 bp CAGTTCTTACACCTGGCTTTATGCAAGCACAGAAGGTaGGGCATAAGCCAATCAATAACTTGTGTGATTCCA +
Preference number: 6 (lower is better)
Translates to: QFLHLALCKHRR*GISQSITCVIP
Trigger: TGGAATCACACAAGTTATTGATTGGCTTATGCCTCACCTTCTGTGCTTGCATAAAGCCAGGTGTAAGAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469007.1
CDS GCA 72 bp CAAAACAGGAATAGAAAAATTAGACCATGTTACTTCTaGTCAGAACTCTCCAGTGGCTGCCCAAGACTCCAA +
Preference number: 6 (lower is better)
Translates to: QNRNRKIRPCYF*SELSSGCPRLQ
Trigger: TTGGAGTCTTGGGCAGCCACTGGAGAGTTCTGAGCAGAAGTAACATGGTCTAATTTTTCTATTCCTGTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482434.1
CDS GCA 72 bp TTCACTCTTGCCTTTCCACAGACATATTCGCATCATTaGAAGTGCAGGAGAAGCCACCTATTTTTCAGCAAT +
Preference number: 6 (lower is better)
Translates to: FTLAFPQTYSHH*KCRRSHLFFSN
Trigger: ATTGCTGAAAAATAGGTGGCTTCTCCTGCACTTGCAATGATGCGAATATGTCTGTGGAAAGGCAAGAGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473907.5
CDS CCA 72 bp TCTCAGGTTTGGGAAGTACACAACACTTACCTTCAATaGTACACTGATCAGGGACTGGAATCTTCTTTCCAA +
Preference number: 6 (lower is better)
Translates to: SQVWEVHNTYLQ*YTDQGLESSFQ
Trigger: TTGGAAAGAAGATTCCAGTCCCTGATCAGTGTACCATTGAAGGTAAGTGTTGTGTACTTCCCAAACCTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472419.1
CDS CAA 72 bp AAAACATGTCCCCAAGCTCAACTTTCGCACCATACCTaGGAGTATGCTCTTTACTATAACTTCCGTGTGATC +
Preference number: 6 (lower is better)
Translates to: KTCPQAQLSHHT*EYALYYNFRVI
Trigger: GATCACACGGAAGTTATAGTAAAGAGCATACTCCAAGGTATGGTGCGAAAGTTGAGCTTGGGGACATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000468233.5
ENST00000482434.1
ENST00000494677.5
CDS CAA 72 bp TTTCACTCTTGCCTTTCCACAGACATATTCGCATCATaGCAAGTGCAGGAGAAGCCACCTATTTTTCAGCAA +
Preference number: 6 (lower is better)
Translates to: FHSCLSTDIFAS*QVQEKPPIFQQ
Trigger: TTGCTGAAAAATAGGTGGCTTCTCCTGCACTTGCAATGATGCGAATATGTCTGTGGAAAGGCAAGAGTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473907.5
CDS CAA 72 bp ACAGATTTCAACTACTGCCTGGTCATTGTTATTGGTTaGGTAATCCTTGTCCTCTTTGCCTGCCAGACTTCT +
Preference number: 6 (lower is better)
Translates to: TDFNYCLVIVIG*VILVLFACQTS
Trigger: AGAAGTCTGGCAGGCAAAGAGGACAAGGATTACCAAACCAATAACAATGACCAGGCAGTAGTTGAAATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479987.5
CDS CAA 90 bp TCTTGTGATACAGATTTCAACTACTGCCTGGTCATTGTTATTGGTTaGGTAATCCTTGTCCTCTTTGCCTGCCAGACTTCTAAATGGTGG +
Preference number: 6 (lower is better)
Translates to: SCDTDFNYCLVIVIG*VILVLFACQTSKWW
Trigger: CCACCATTTAGAAGTCTGGCAGGCAAAGAGGACAAGGATTACCAAACCAATAACAATGACCAGGCAGTAGTTGAAATCTGTATCACAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479987.5
CDS TCA 72 bp TTGGGAAGTACACAACACTTACCTTCAATGGTACACTaGTCAGGGACTGGAATCTTCTTTCCAATTTCCATG +
Preference number: 6 (lower is better)
Translates to: LGSTQHLPSMVH*SGTGIFFPISM
Trigger: CATGGAAATTGGAAAGAAGATTCCAGTCCCTGATCAGTGTACCATTGAAGGTAAGTGTTGTGTACTTCCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472419.1
CDS GCA 72 bp ATTGTTATTGGTTTGGTAATCCTTGTCCTCTTTGCCTaGCAGACTTCTAAATGGTGGATTCCTCCCTGTTTA +
Preference number: 6 (lower is better)
Translates to: IVIGLVILVLFA*QTSKWWIPPCL
Trigger: TAAACAGGGAGGAATCCACCATTTAGAAGTCTGGCAGGCAAAGAGGACAAGGATTACCAAACCAATAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479987.5
CDS CCA 72 bp TCTCACAGTGTCTTCAATGGTACACTGATCAGGGACTaGAATCTTCTTTCCAATTTCCATGGCATATGCTTT +
Preference number: 6 (lower is better)
Translates to: SHSVFNGTLIRD*NLLSNFHGICF
Trigger: AAAGCATATGCCATGGAAATTGGAAAGAAGATTCCAGTCCCTGATCAGTGTACCATTGAAGACACTGTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
CDS GCA 72 bp GGCTGTTGTGATTCTTGTGATACAGATTTCAACTACTaGCTGGTCATTGTTATTGGTTTGGTAATCCTTGTC +
Preference number: 6 (lower is better)
Translates to: GCCDSCDTDFNY*LVIVIGLVILV
Trigger: GACAAGGATTACCAAACCAATAACAATGACCAGGCAGTAGTTGAAATCTGTATCACAAGAATCACAACAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479987.5
CDS CCA 72 bp ACAACACTTACCTTCAATGGTACACTGATCAGGGACTaGAATCTTCTTTCCAATTTCCATGGCATATGCTTT +
Preference number: 6 (lower is better)
Translates to: TTLTFNGTLIRD*NLLSNFHGICF
Trigger: AAAGCATATGCCATGGAAATTGGAAAGAAGATTCCAGTCCCTGATCAGTGTACCATTGAAGGTAAGTGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472419.1
CDS CCA 72 bp GCTATCTCTATGAGGATGTTTAGGATGATGTCATTATaGGTTGAATCCTTCAAATGCCCAATTAGGAAAGGA +
Preference number: 6 (lower is better)
Translates to: AISMRMFRMMSL*VESFKCPIRKG
Trigger: TCCTTTCCTAATTGGGCATTTGAAGGATTCAACCCATAATGACATCATCCTAAACATCCTCATAGAGATAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6
ENST00000469007.1
ENST00000482685.5
CDS TCA 72 bp GATAATACAATGCCTGTGGTGTATAATTGTCATGGCTaGCTTATAAATCCCTACAGATATGTGGTTACTTCT +
Preference number: 6 (lower is better)
Translates to: DNTMPVVYNCHG*LINPYRYVVTS
Trigger: AGAAGTAACCACATATCTGTAGGGATTTATAAGTCAGCCATGACAATTATACACCACAGGCATTGTATTATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362010.7
ENST00000392832.6
ENST00000392833.6