Pregenerated sensors for VEGFC (Homo sapiens)
Ensembl gene IDs: ENSG00000150630Ensembl transcript IDs: ENST00000507638.1, ENST00000618562.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTTTTGCAGATGAGCTCCAGTCCATTTCTGTAAAGTTATCCACATaGTTCAGGAAAGACAGACTTTTGTCTTTGTTAGCATGGACCCAC | + |
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Preference number: 1 (lower is better) Translates to: PFADELQSISVKLST*FRKDRLLSLLAWTH Trigger: GTGGGTCCATGCTAACAAAGACAAAAGTCTGTCTTTCCTGAACCATGTGGATAACTTTACAGAAATGGACTGGAGCTCATCTGCAAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| 3UTR CAA 90 bp | TCTGTAAAGTTATCCACATGGTTCAGGAAAGACAGACTTTTGTCTTaGTTAGCATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTC | + |
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Preference number: 2 (lower is better) Translates to: SVKLSTWFRKDRLLS*LAWTHKGLSVHRQF Trigger: GAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATGCTAACAAAGACAAAAGTCTGTCTTTCCTGAACCATGTGGATAACTTTACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAAATCACAAGAGGAAAATCTTGGCTGTTTGGTCATTGGCAGAAAACCAGTCTTGTCTTTGTTAGCATaGACCCACAAGGGTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: KKSQEENLGCLVIGRKPVLSLLA*THKGLS Trigger: AGAGAGACCCTTGTGGGTCCATGCTAACAAAGACAA...GACTGGTTTTCTGCCAATGACCAAACAGCCAAGATTTTCCTCTTGTGATTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| 3UTR TCA 72 bp | GCAGAAAACCAGTCTTTACAAGAGGCCTTTTGCAGATaGGCTCCAGTCCATTTCTGTAAAGTTATCCACATG | + |
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Preference number: 3 (lower is better) Translates to: AENQSLQEAFCR*APVHFCKVIHM Trigger: CATGTGGATAACTTTACAGAAATGGACTGGAGCTCATCTGCAAAAGGCCTCTTGTAAAGACTGGTTTTCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGAAATCACAAGAGGAAAATCTTGGCTGTTTGGTCATTGGCAGAAAACCAGTGACAGACTTTTGTCTTaGTTAGCATGGACCCACAAG | + |
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Preference number: 3 (lower is better) Translates to: KEITRGKSWLFGHWQKTSDRLLS*LAWTHK Trigger: CTTGTGGGTCCATGCTAACAAAGACAAAAGTCTGTC...ACTGGTTTTCTGCCAATGACCAAACAGCCAAGATTTTCCTCTTGTGATTTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGAAATCACAAGAGGAAAATCTTGGCTGTTTGGTCATTGGCAGAAAACCAGTAGGAAAGACAGACTTTaGTCTTTGTTAGCATGGACC | + |
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Preference number: 3 (lower is better) Translates to: KEITRGKSWLFGHWQKTSRKDRL*SLLAWT Trigger: GGTCCATGCTAACAAAGACAAAAGTCTGTCTTTCCT...ACTGGTTTTCTGCCAATGACCAAACAGCCAAGATTTTCCTCTTGTGATTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| 3UTR CCA 72 bp | GATGAGCTCCAGTCCATTTCTGTAAAGTTATCCACATaGTTCAGGAAAGACAGACTTTTGTCTTTGTTAGCA | + |
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Preference number: 3 (lower is better) Translates to: DELQSISVKLST*FRKDRLLSLLA Trigger: TGCTAACAAAGACAAAAGTCTGTCTTTCCTGAACCATGTGGATAACTTTACAGAAATGGACTGGAGCTCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR TCA 90 bp | GTCTTTGTTAGCATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTCCCCTTCCCCGAAGTaGGAGGAGCCGGGCCGCGGG | + |
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Preference number: 4 (lower is better) Translates to: VFVSMDPQGSLCSQTVLLSPSPK*EEPGRG Trigger: CCCGCGGCCCGGCTCCTCTCACTTCGGGGAAGGGGA...CAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATGCTAACAAAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR GCA 90 bp | TGGCAGAAAACCAGTCTTTACAAGAGGCCTTTTGCAGATGAGCTCCAGTCCATTCGCCCTCCCAGCCAGTaGCGGGGAAAGGCGGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: WQKTSLYKRPFADELQSIRPPSQ*RGKAAG Trigger: ACCCGCCGCCTTTCCCCGGCACTGGCTGGGAGGGCG...AATGGACTGGAGCTCATCTGCAAAAGGCCTCTTGTAAAGACTGGTTTTCTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR GCA 90 bp | GTCTTTGTTAGCATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGCCGCGTTCCCAACTTTaGAGGGCGCCCTCCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: VFVSMDPQGSLCSQTVLLPRSQL*RAPSQP Trigger: TGGCTGGGAGGGCGCCCTGCAAAGTTGGGAACGCGG...CAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATGCTAACAAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR CCA 90 bp | TCTTTGTTAGCATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTTGTGGGGTCCACAGCTaGCAGGCCGAAGCCCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: SLLAWTHKGLSVHRQFYCCGVHS*QAEAPL Trigger: GAGCGGGGCTTCGGCCTGCCAGCTGTGGACCCCACA...ACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATGCTAACAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR TCA 90 bp | CCAGTCCATTTCTGTAAAGTTATCCACATGGTTCAGGAAAGACAGACTTTTGTCTCGGAGCCCGCGAGGTaGAGCGAGGGCGAGGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: PVHFCKVIHMVQERQTFVSEPAR*SEGEGG Trigger: TCCTCCCTCGCCCTCGCTTCACCTCGCGGGCTCCGA...GACAAAAGTCTGTCTTTCCTGAACCATGTGGATAACTTTACAGAAATGGACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR CCA 90 bp | CATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCAACACAGCTGTCTAGTTCTTTGTaGGGTCCACAGCTGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: HGPTRVSLFTDSSTVATQLSSSL*GPQLAG Trigger: GCCTGCCAGCTGTGGACCCCACAAAGAACTAGACAG...CTGTGTTGCCACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR GCA 90 bp | TTGTTAGCATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCCTCCAGATCTTTGCTTaGATAAGCCGTGGCCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: LLAWTHKGLSVHRQFYCGLQIFA*ISRGLA Trigger: GGCGAGGCCACGGCTTATGCAAGCAAAGATCTGGAG...GCCACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATGCTAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR CCA 90 bp | GTCCATTTCTGTAAAGTTATCCACATGGTTCAGGAAAGACAGACTTTTGTCTTTTGGAAGGACCGGGGGTaGGGGACCGGTCCGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: VHFCKVIHMVQERQTFVFWKDRG*GTGPLA Trigger: CGCCAGCGGACCGGTCCCCCACCCCCGGTCCTTCCA...AAAGACAAAAGTCTGTCTTTCCTGAACCATGTGGATAACTTTACAGAAATGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR CCA 90 bp | CTTTACAAGAGGCCTTTTGCAGATGAGCTCCAGTCCATTTCTGTAAAGTTATCCCCAGCAAGTGCATGGTaGAAGGACCGGGGGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: LYKRPFADELQSISVKLSPASAW*KDRGWG Trigger: CCCCCACCCCCGGTCCTTCCACCATGCACTTGCTGG...GGATAACTTTACAGAAATGGACTGGAGCTCATCTGCAAAAGGCCTCTTGTAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR CCA 90 bp | GTTATCCACATGGTTCAGGAAAGACAGACTTTTGTCTTTGTTAGCATGGACCCATGCTTGCATAAGCCGTaGCCTCGCCCGCGTCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: VIHMVQERQTFVFVSMDPCLHKP*PRPRRA Trigger: AGCCCGACGCGGGCGAGGCCACGGCTTATGCAAGCA...TGGGTCCATGCTAACAAAGACAAAAGTCTGTCTTTCCTGAACCATGTGGATAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR CCA 90 bp | GGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCAACACAGTTTCATCAAATTCTCGGTTaGCCCCACATTGGCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: GPTRVSLFTDSSTVATQFHQILG*PHIGWG Trigger: TCCCCAGCCAATGTGGGGCCAACCGAGAATTTGATG...AAACTGTGTTGCCACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR TCA 90 bp | TTGTTAGCATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCCAAATAACGTCTTGCTaGGGTAGCTCGTGCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LLAWTHKGLSVHRQFYCGQITSC*GSSCWC Trigger: ACACCAGCACGAGCTACCTCAGCAAGACGTTATTTG...GCCACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATGCTAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR GCA 90 bp | TGGCAGAAAACCAGTCTTTACAAGAGGCCTTTTGCAGATGAGCTCCAGTCCATTGCAGCCCCTCACTATTaGAGCAACCCCCACATCTGT | + |
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Preference number: 4 (lower is better) Translates to: WQKTSLYKRPFADELQSIAAPHY*SNPHIC Trigger: ACAGATGTGGGGGTTGCTGCAATAGTGAGGGGCTGC...AATGGACTGGAGCTCATCTGCAAAAGGCCTCTTGTAAAGACTGGTTTTCTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR GCA 90 bp | CATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCAACACAGCCTGAGCCAGGCATCTaGAGATGTGATTATTCCACA | + |
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Preference number: 4 (lower is better) Translates to: HGPTRVSLFTDSSTVATQPEPGI*RCDYST Trigger: TGTGGAATAATCACATCTGCAGATGCCTGGCTCAGG...CTGTGTTGCCACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR CCA 90 bp | TGGCAGAAAACCAGTCTTTACAAGAGGCCTTTTGCAGATGAGCTCCAGTCCATTCTGGCGGTTCGTACATaGCCGTCTGTAACAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: WQKTSLYKRPFADELQSILAVRT*PSVTAA Trigger: TGCAGCTGTTACAGACGGCCATGTACGAACCGCCAG...AATGGACTGGAGCTCATCTGCAAAAGGCCTCTTGTAAAGACTGGTTTTCTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR TCA 90 bp | AGGAAAGACAGACTTTTGTCTTTGTTAGCATGGACCCACAAGGGTCTCTCTGTTGCTCTGCAGACACACTaGCAGGTCTCTTCATCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RKDRLLSLLAWTHKGLSVALQTH*QVSSSS Trigger: GCTGGATGAAGAGACCTGTCAGTGTGTCTGCAGAGC...AACAGAGAGACCCTTGTGGGTCCATGCTAACAAAGACAAAAGTCTGTCTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR CCA 90 bp | CATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCAACACAGTATACACACCTCCCGTaGCATGCATTGAGTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: HGPTRVSLFTDSSTVATQYTHLP*HALSLS Trigger: AGAAAGACTCAATGCATGCCACGGGAGGTGTGTATA...CTGTGTTGCCACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR TCA 90 bp | GTTAGCATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCAATGTGATTGGCAAAACTaGTTGTTACTGGTTTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: VSMDPQGSLCSQTVLLWQCDWQN*LLLVWG Trigger: GCCCCAAACCAGTAACAATCAGTTTTGCCAATCACA...TTGCCACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATGCTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR TCA 90 bp | GGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCAACACAGTTTGGTAGAGTACAGTCATaGGTTCATCTACACTGGACA | + |
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Preference number: 4 (lower is better) Translates to: GPTRVSLFTDSSTVATQFGRVQS*VHLHWT Trigger: TGTCCAGTGTAGATGAACTCATGACTGTACTCTACC...AAACTGTGTTGCCACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR GCA 90 bp | AGGAAAGACAGACTTTTGTCTTTGTTAGCATGGACCCACAAGGGTCTCTCTGTTCTGGTGTTCATGCACTaGAGCCCCTCACTATTGCAG | + |
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Preference number: 4 (lower is better) Translates to: RKDRLLSLLAWTHKGLSVLVFMH*SPSLLQ Trigger: CTGCAATAGTGAGGGGCTGCAGTGCATGAACACCAG...AACAGAGAGACCCTTGTGGGTCCATGCTAACAAAGACAAAAGTCTGTCTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR GCA 90 bp | AGGAAAGACAGACTTTTGTCTTTGTTAGCATGGACCCACAAGGGTCTCTCTGTTTCGTGCTGGTGTTCATaGACTGCAGCCCCTCACTAT | + |
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Preference number: 4 (lower is better) Translates to: RKDRLLSLLAWTHKGLSVSCWCS*TAAPHY Trigger: ATAGTGAGGGGCTGCAGTGCATGAACACCAGCACGA...AACAGAGAGACCCTTGTGGGTCCATGCTAACAAAGACAAAAGTCTGTCTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR CCA 90 bp | TTGTTAGCATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCTATTCCACATGTAATTaGTGGGGCAGGTCTTGTTCG | + |
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Preference number: 4 (lower is better) Translates to: LLAWTHKGLSVHRQFYCGYSTCN*WGRSCS Trigger: CGAACAAGACCTGCCCCACCAATTACATGTGGAATA...GCCACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATGCTAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR CCA 90 bp | TTGTTAGCATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCTTGTCTTTGTTAGCATaGACCCACAAGGGTCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: LLAWTHKGLSVHRQFYCGLSLLA*THKGLS Trigger: AGAGAGACCCTTGTGGGTCCATGCTAACAAAGACAA...GCCACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATGCTAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR GCA 90 bp | GTCCATTTCTGTAAAGTTATCCACATGGTTCAGGAAAGACAGACTTTTGTCTTTGCCGAAGCCCCGCTCTaGAGACACACTGACAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: VHFCKVIHMVQERQTFVFAEAPL*RHTDRS Trigger: AGACCTGTCAGTGTGTCTGCAGAGCGGGGCTTCGGC...AAAGACAAAAGTCTGTCTTTCCTGAACCATGTGGATAACTTTACAGAAATGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR GCA 90 bp | ACATGGTTCAGGAAAGACAGACTTTTGTCTTTGTTAGCATGGACCCACAAGGGTGCCGTCTGTAACAGCTaGATGTTTGGTGGTGGAACT | + |
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Preference number: 4 (lower is better) Translates to: TWFRKDRLLSLLAWTHKGAVCNS*MFGGGT Trigger: AGTTCCACCACCAAACATGCAGCTGTTACAGACGGC...ACCCTTGTGGGTCCATGCTAACAAAGACAAAAGTCTGTCTTTCCTGAACCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR CCA 90 bp | TTGTTAGCATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCGTAGACGGACACACATaGAGGTTTAAAGAAGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: LLAWTHKGLSVHRQFYCGVDGHT*RFKEGV Trigger: AACACCTTCTTTAAACCTCCATGTGTGTCCGTCTAC...GCCACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATGCTAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR CCA 90 bp | TCTTTGTTAGCATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTTGGCCCCACATTGGCTaGGGAAGAGTTTGTTTTTAC | + |
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Preference number: 4 (lower is better) Translates to: SLLAWTHKGLSVHRQFYCWPHIG*GRVCFY Trigger: GTAAAAACAAACTCTTCCCCAGCCAATGTGGGGCCA...ACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATGCTAACAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR CCA 90 bp | GTTATCCACATGGTTCAGGAAAGACAGACTTTTGTCTTTGTTAGCATGGACCCACGGTTGGCCCCACATTaGCTGGGGAAGAGTTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: VIHMVQERQTFVFVSMDPRLAPH*LGKSLF Trigger: AAACAAACTCTTCCCCAGCCAATGTGGGGCCAACCG...TGGGTCCATGCTAACAAAGACAAAAGTCTGTCTTTCCTGAACCATGTGGATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR CCA 90 bp | AAAGAAATCACAAGAGGAAAATCTTGGCTGTTTGGTCATTGGCAGAAAACCAGTGGCTCACAAGCCTTCTaGCGGTTCGTACATGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: KEITRGKSWLFGHWQKTSGSQAF*RFVHGR Trigger: ACGGCCATGTACGAACCGCCAGAAGGCTTGTGAGCC...ACTGGTTTTCTGCCAATGACCAAACAGCCAAGATTTTCCTCTTGTGATTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR GCA 90 bp | GTCCATTTCTGTAAAGTTATCCACATGGTTCAGGAAAGACAGACTTTTGTCTTTAAGAAGCCCAGCAAGTaGATGGTGGAAGGACCGGGG | + |
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Preference number: 4 (lower is better) Translates to: VHFCKVIHMVQERQTFVFKKPSK*MVEGPG Trigger: CCCCGGTCCTTCCACCATGCACTTGCTGGGCTTCTT...AAAGACAAAAGTCTGTCTTTCCTGAACCATGTGGATAACTTTACAGAAATGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR GCA 90 bp | ACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCAACACAGTTTTCCATAGACACAGACCGTAACTaGTCCTCCAGATCTTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: TRVSLFTDSSTVATQFSIDTDRN*SSRSLL Trigger: AAGCAAAGATCTGGAGGAGCAGTTACGGTCTGTGTC...TATGGAAAACTGTGTTGCCACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR CCA 90 bp | ATTGGCAGAAAACCAGTCTTTACAAGAGGCCTTTTGCAGATGAGCTCCAGTCCAGGTCCACAGATGTCATaGAATCCATCTGTTGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: IGRKPVFTRGLLQMSSSPGPQMS*NPSVES Trigger: TGACTCAACAGATGGATTCCATGACATCTGTGGACC...TGGACTGGAGCTCATCTGCAAAAGGCCTCTTGTAAAGACTGGTTTTCTGCCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR TCA 90 bp | ACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCAACACAGTTTTCCATACATCGGCAGGAAGTGTaGTTGGCAAAACTGATTGTT | + |
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Preference number: 4 (lower is better) Translates to: TRVSLFTDSSTVATQFSIHRQEV*LAKLIV Trigger: AACAATCAGTTTTGCCAATCACACTTCCTGCCGATG...TATGGAAAACTGTGTTGCCACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR TCA 90 bp | ACATGGTTCAGGAAAGACAGACTTTTGTCTTTGTTAGCATGGACCCACAAGGGTAACATAAAATCTTCCTaGGCCAGGCATCTGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: TWFRKDRLLSLLAWTHKGNIKSS*ARHLQM Trigger: CATCTGCAGATGCCTGGCTCAGGAAGATTTTATGTT...ACCCTTGTGGGTCCATGCTAACAAAGACAAAAGTCTGTCTTTCCTGAACCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR TCA 90 bp | ACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCAACACAGTTTTCCATATGGTCTTTTCCAATATaGAGGGACACAACGACACAC | + |
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Preference number: 4 (lower is better) Translates to: TRVSLFTDSSTVATQFSIWSFPI*RDTTTH Trigger: GTGTGTCGTTGTGTCCCTTCATATTGGAAAAGACCA...TATGGAAAACTGTGTTGCCACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR GCA 90 bp | AAAGAAATCACAAGAGGAAAATCTTGGCTGTTTGGTCATTGGCAGAAAACCAGTGCTCCTCCAGATCTTTaGTTGCATAAGCCGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: KEITRGKSWLFGHWQKTSAPPDL*LHKPWP Trigger: AGGCCACGGCTTATGCAAGCAAAGATCTGGAGGAGC...ACTGGTTTTCTGCCAATGACCAAACAGCCAAGATTTTCCTCTTGTGATTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR GCA 90 bp | ACATGGTTCAGGAAAGACAGACTTTTGTCTTTGTTAGCATGGACCCACAAGGGTTGTTCTCTGTTATGTTaGCAGCCTCCTTTCCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: TWFRKDRLLSLLAWTHKGCSLLC*QPPFLS Trigger: GCTAAGGAAAGGAGGCTGGCAACATAACAGAGAACA...ACCCTTGTGGGTCCATGCTAACAAAGACAAAAGTCTGTCTTTCCTGAACCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR CCA 90 bp | ATTGGCAGAAAACCAGTCTTTACAAGAGGCCTTTTGCAGATGAGCTCCAGTCCAAAAACTGATTGTTACTaGTTTGGGGCCTTGAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: IGRKPVFTRGLLQMSSSPKTDCY*FGALRE Trigger: CTCTCTCAAGGCCCCAAACCAGTAACAATCAGTTTT...TGGACTGGAGCTCATCTGCAAAAGGCCTCTTGTAAAGACTGGTTTTCTGCCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS-3UTR CCA 90 bp | ACATGGTTCAGGAAAGACAGACTTTTGTCTTTGTTAGCATGGACCCACAAGGGTATCCAGCTCCTTGTTTaGTCCACAGATGTCATGGAA | + |
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Preference number: 4 (lower is better) Translates to: TWFRKDRLLSLLAWTHKGIQLLV*STDVME Trigger: TTCCATGACATCTGTGGACCAAACAAGGAGCTGGAT...ACCCTTGTGGGTCCATGCTAACAAAGACAAAAGTCTGTCTTTCCTGAACCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| 3UTR CAA 72 bp | TTATCCACATGGTTCAGGAAAGACAGACTTTTGTCTTaGTTAGCATGGACCCACAAGGGTCTCTCTGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSTWFRKDRLLS*LAWTHKGLSVH Trigger: GTGAACAGAGAGACCCTTGTGGGTCCATGCTAACAAAGACAAAAGTCTGTCTTTCCTGAACCATGTGGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR TCA 90 bp | AGGAAAGACAGACTTTTGTCTTTGTTAGCATGGACCCACAAGGGTCTCTCTGTTCCTCCTTTCCTTAGCTaGCACTTGTACATTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RKDRLLSLLAWTHKGLSVPPFLS*HLYIFQ Trigger: TTGGAAAATGTACAAGTGTCAGCTAAGGAAAGGAGG...AACAGAGAGACCCTTGTGGGTCCATGCTAACAAAGACAAAAGTCTGTCTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR TCA 90 bp | CCAGTCCATTTCTGTAAAGTTATCCACATGGTTCAGGAAAGACAGACTTTTGTCATGGAATCCATCTGTTaGGTCATCTCCAGCATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PVHFCKVIHMVQERQTFVMESIC*VISSIR Trigger: TCGGATGCTGGAGATGACTCAACAGATGGATTCCAT...GACAAAAGTCTGTCTTTCCTGAACCATGTGGATAACTTTACAGAAATGGACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTTGTTAGCATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTTTTTACAGACACACTaGCATGAGTTTCTGTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFVSMDPQGSLCSQTVLLFLQTH*HEFLSS Trigger: ACTAGACAGAAACTCATGCCAGTGTGTCTGTAAAAA...CAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATGCTAACAAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CCA 90 bp | TGGCAGAAAACCAGTCTTTACAAGAGGCCTTTTGCAGATGAGCTCCAGTCCATTCATTTTCCAATATTCTaGGTAGAGTACAGTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: WQKTSLYKRPFADELQSIHFPIF*VEYSHE Trigger: CTCATGACTGTACTCTACCCAGAATATTGGAAAATG...AATGGACTGGAGCTCATCTGCAAAAGGCCTCTTGTAAAGACTGGTTTTCTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGACAGACTTTTGTCTTTGTTAGCATGGACCCACAAGGGTCTCTCTGTTCTGCATGTTTGGTGGTaGAACTTCTTTCCTTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: RKDRLLSLLAWTHKGLSVLHVWW*NFFPFN Trigger: GTTAAAAGGAAAGAAGTTCCACCACCAAACATGCAG...AACAGAGAGACCCTTGTGGGTCCATGCTAACAAAGACAAAAGTCTGTCTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR TCA 90 bp | CATTTCTGTAAAGTTATCCACATGGTTCAGGAAAGACAGACTTTTGTCTTTGTTCTTCTGTCCTTGAGTTaGGGTTGGCCTGTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HFCKVIHMVQERQTFVFVLLSLS*GWPVLC Trigger: ACAGAGAACAGGCCAACCTCAACTCAAGGACAGAAG...AACAAAGACAAAAGTCTGTCTTTCCTGAACCATGTGGATAACTTTACAGAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR TCA 90 bp | CATTTCTGTAAAGTTATCCACATGGTTCAGGAAAGACAGACTTTTGTCTTTGTTCCAGGATTTAGGGGTTaGTTTCTGGGGCAGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HFCKVIHMVQERQTFVFVPGFRG*FLGQVL Trigger: AAGAACCTGCCCCAGAAATCAACCCCTAAATCCTGG...AACAAAGACAAAAGTCTGTCTTTCCTGAACCATGTGGATAACTTTACAGAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CCA 90 bp | CATTTCTGTAAAGTTATCCACATGGTTCAGGAAAGACAGACTTTTGTCTTTGTTTCCACATGTAATTGGTaGGGCAGGTCTTGTTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HFCKVIHMVQERQTFVFVSTCNW*GRSCSL Trigger: CAGCGAACAAGACCTGCCCCACCAATTACATGTGGA...AACAAAGACAAAAGTCTGTCTTTCCTGAACCATGTGGATAACTTTACAGAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CCA 90 bp | AAGAAATCACAAGAGGAAAATCTTGGCTGTTTGGTCATTGGCAGAAAACCAGTCTGGCTGTTTGGTCATTaGCAGAAAACCAGTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KKSQEENLGCLVIGRKPVWLFGH*QKTSLY Trigger: GTAAAGACTGGTTTTCTGCCAATGACCAAACAGCCA...GACTGGTTTTCTGCCAATGACCAAACAGCCAAGATTTTCCTCTTGTGATTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CCA 90 bp | CTTTACAAGAGGCCTTTTGCAGATGAGCTCCAGTCCATTTCTGTAAAGTTATCCGTAAAGTTATCCACATaGTTCAGGAAAGACAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LYKRPFADELQSISVKLSVKLST*FRKDRL Trigger: AAGTCTGTCTTTCCTGAACCATGTGGATAACTTTAC...GGATAACTTTACAGAAATGGACTGGAGCTCATCTGCAAAAGGCCTCTTGTAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CCA 90 bp | AAAGAAATCACAAGAGGAAAATCTTGGCTGTTTGGTCATTGGCAGAAAACCAGTTTAGGGGTTGATTTCTaGGGCAGGTTCTTTTACATA | + |
|
Preference number: 4 (lower is better) Translates to: KEITRGKSWLFGHWQKTSLGVDF*GRFFYI Trigger: TATGTAAAAGAACCTGCCCCAGAAATCAACCCCTAA...ACTGGTTTTCTGCCAATGACCAAACAGCCAAGATTTTCCTCTTGTGATTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CCA 90 bp | GTCCATTTCTGTAAAGTTATCCACATGGTTCAGGAAAGACAGACTTTTGTCTTTACAAGAGGAAAATCTTaGCTGTTTGGTCATTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VHFCKVIHMVQERQTFVFTRGKS*LFGHWQ Trigger: CTGCCAATGACCAAACAGCCAAGATTTTCCTCTTGT...AAAGACAAAAGTCTGTCTTTCCTGAACCATGTGGATAACTTTACAGAAATGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS TCA 90 bp | CAGGAAACCGGACATCCGAGCTCCCCGCATTCGGAGCCCGCGAGGTaGAGCGAGGGCGAGGGAGGACGCCGCCGCGGTCCGCGTCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QETGHPSSPHSEPAR*SEGEGGRRRGPRRC Trigger: ACACCGACGCGGACCGCGGCGGCGTCCTCCCTCGCCCTCGCTTCACCTCGCGGGCTCCGAATGCGGGGAGCTCGGATGTCCGGTTTCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS TCA 90 bp | TGGGGTCCACAGCTGGCAGGCCGAAGCCCCGCTCTGCAGACACACTaGCAGGTCTCTTCATCCAGCTCCTTGTTTGGTCCACAGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: WGPQLAGRSPALQTH*QVSSSSSLFGPQMS Trigger: TGACATCTGTGGACCAAACAAGGAGCTGGATGAAGAGACCTGTCAGTGTGTCTGCAGAGCGGGGCTTCGGCCTGCCAGCTGTGGACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS GCA 90 bp | CTAGTTCTTTGTGGGGTCCACAGCTGGCAGGCCGAAGCCCCGCTCTaGAGACACACTGACAGGTCTCTTCATCCAGCTCCTTGTTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LVLCGVHSWQAEAPL*RHTDRSLHPAPCLV Trigger: GACCAAACAAGGAGCTGGATGAAGAGACCTGTCAGTGTGTCTGCAGAGCGGGGCTTCGGCCTGCCAGCTGTGGACCCCACAAAGAACTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS CCA 90 bp | CACACTGGCATGAGTTTCTGTCTAGTTCTTTGTGGGGTCCACAGCTaGCAGGCCGAAGCCCCGCTCTGCAGACACACTGACAGGTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HTGMSFCLVLCGVHS*QAEAPLCRHTDRSL Trigger: AAGAGACCTGTCAGTGTGTCTGCAGAGCGGGGCTTCGGCCTGCCAGCTGTGGACCCCACAAAGAACTAGACAGAAACTCATGCCAGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CAA 90 bp | GTTAGCATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCAATGCAGCCCCTCACTATaGCAGCAACCCCCACATCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSMDPQGSLCSQTVLLWQCSPSL*QQPPHL Trigger: CAGATGTGGGGGTTGCTGCAATAGTGAGGGGCTGCA...TTGCCACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATGCTAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS CCA 90 bp | CCCCTCACTATTGCAGCAACCCCCACATCTGTAGACGGACACACATaGAGGTTTAAAGAAGGTGTTTGTCGCGACTCCAAACTCCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PLTIAATPTSVDGHT*RFKEGVCRDSKLLP Trigger: GGGAAGGAGTTTGGAGTCGCGACAAACACCTTCTTTAAACCTCCATGTGTGTCCGTCTACAGATGTGGGGGTTGCTGCAATAGTGAGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000507638.1 ENST00000618562.2 |
||
| CDS-3UTR CAA 90 bp | AAGAAATCACAAGAGGAAAATCTTGGCTGTTTGGTCATTGGCAGAAAACCAGTCTCCGCGTTCCCAACTTaGCAGGGCGCCCTCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KKSQEENLGCLVIGRKPVSAFPT*QGALPA Trigger: GGCTGGGAGGGCGCCCTGCAAAGTTGGGAACGCGGA...GACTGGTTTTCTGCCAATGACCAAACAGCCAAGATTTTCCTCTTGTGATTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS CCA 90 bp | CTTCCTGAGCCAGGCATCTGCAGATGTGATTATTCCACATGTAATTaGTGGGGCAGGTCTTGTTCGCTGCCTGACACTGTGGTAGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPEPGICRCDYSTCN*WGRSCSLPDTVVVL Trigger: CAACACTACCACAGTGTCAGGCAGCGAACAAGACCTGCCCCACCAATTACATGTGGAATAATCACATCTGCAGATGCCTGGCTCAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CAA 90 bp | ATTGGCAGAAAACCAGTCTTTACAAGAGGCCTTTTGCAGATGAGCTCCAGTCCACCTCCAGATCTTTGCTaGCATAAGCCGTGGCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: IGRKPVFTRGLLQMSSSPPPDLC*HKPWPR Trigger: GCGAGGCCACGGCTTATGCAAGCAAAGATCTGGAGG...TGGACTGGAGCTCATCTGCAAAAGGCCTCTTGTAAAGACTGGTTTTCTGCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CAA 90 bp | CATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCAACACAGCATGGAATCCATCTGTaGAGTCATCTCCAGCATCCG | + |
|
Preference number: 5 (lower is better) Translates to: HGPTRVSLFTDSSTVATQHGIHL*SHLQHP Trigger: CGGATGCTGGAGATGACTCAACAGATGGATTCCATG...CTGTGTTGCCACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS TCA 90 bp | CTACTAGACACAGACATGGGGAAGGTCTCTTCATTCCTCTTCATATaGCAGTTTGTCGAAGATTGCCCCCTTGTCCTCCATCCACCCATC | + |
|
Preference number: 5 (lower is better) Translates to: LLDTDMGKVSSFLFI*QFVEDCPLVLHPPI Trigger: GATGGGTGGATGGAGGACAAGGGGGCAATCTTCGACAAACTGTCATATGAAGAGGAATGAAGAGACCTTCCCCATGTCTGTGTCTAGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000507638.1 |
||
| CDS-3UTR CAA 90 bp | GTTAGCATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCAAGTAACAGCTGCATGTTaGGTGGTGGAACTTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSMDPQGSLCSQTVLLWQVTAAC*VVELLS Trigger: GGAAAGAAGTTCCACCACCAAACATGCAGCTGTTAC...TTGCCACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATGCTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CAA 90 bp | CATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCAACACAGCACAAGAGGAAAATCTaGGCTGTTTGGTCATTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HGPTRVSLFTDSSTVATQHKRKI*AVWSLA Trigger: TGCCAATGACCAAACAGCCAAGATTTTCCTCTTGTG...CTGTGTTGCCACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CAA 90 bp | CATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGTGGCAACACAGTTGGCTGTTTGGTCATaGGCAGAAAACCAGTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: HGPTRVSLFTDSSTVATQLAVWS*AENQSL Trigger: TAAAGACTGGTTTTCTGCCAATGACCAAACAGCCAA...CTGTGTTGCCACAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CAA 90 bp | AGGAAAGACAGACTTTTGTCTTTGTTAGCATGGACCCACAAGGGTCTCTCTGTTCTCCCGTGGCATGCATaGAGTCTTTCTCCACTCATT | + |
|
Preference number: 5 (lower is better) Translates to: RKDRLLSLLAWTHKGLSVLPWHA*SLSPLI Trigger: AATGAGTGGAGAAAGACTCAATGCATGCCACGGGAG...AACAGAGAGACCCTTGTGGGTCCATGCTAACAAAGACAAAAGTCTGTCTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CAA 90 bp | TGGCAGAAAACCAGTCTTTACAAGAGGCCTTTTGCAGATGAGCTCCAGTCCATTGTCCTTGAGTTGAGGTaGGCCTGTTCTCTGTTATGT | + |
|
Preference number: 5 (lower is better) Translates to: WQKTSLYKRPFADELQSIVLELR*ACSLLC Trigger: ACATAACAGAGAACAGGCCAACCTCAACTCAAGGAC...AATGGACTGGAGCTCATCTGCAAAAGGCCTCTTGTAAAGACTGGTTTTCTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTCCATTTCTGTAAAGTTATCCACATGGTTCAGGAAAGACAGACTTTTGTCTCGGTTGGCCCCACATaGGCTGGGGAAGAGTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PVHFCKVIHMVQERQTFVSVGPT*AGEEFV Trigger: AACAAACTCTTCCCCAGCCAATGTGGGGCCAACCGA...GACAAAAGTCTGTCTTTCCTGAACCATGTGGATAACTTTACAGAAATGGACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CAA 90 bp | GTCTTTGTTAGCATGGACCCACAAGGGTCTCTCTGTTCACAGACAGTTCTACTGGACAGACTTTTGTCTTaGTTAGCATGGACCCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: VFVSMDPQGSLCSQTVLLDRLLS*LAWTHK Trigger: CTTGTGGGTCCATGCTAACAAAGACAAAAGTCTGTC...CAGTAGAACTGTCTGTGAACAGAGAGACCCTTGTGGGTCCATGCTAACAAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS CCA 90 bp | TGTCGCGACTCCAAACTCCTTCCCCACATCTATACACACCTCCCGTaGCATGCATTGAGTCTTTCTCCACTCATTATCAATACTTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: CRDSKLLPHIYTHLP*HALSLSPLIINTFQ Trigger: TTGAAAAGTATTGATAATGAGTGGAGAAAGACTCAATGCATGCCACGGGAGGTGTGTATAGATGTGGGGAAGGAGTTTGGAGTCGCGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000507638.1 ENST00000618562.2 |
||
| CDS TCA 90 bp | CCCTTGTCCTCCATCCACCCATCACCTTCTGCAAATAGCAATGACTaGTTTGACCTTTCTTTGTCCCTTCTTGAGTTTCTTCAAGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PLSSIHPSPSANSND*FDLSLSLLEFLQES Trigger: TGACTCTTGAAGAAACTCAAGAAGGGACAAAGAAAGGTCAAATCAGTCATTGCTATTTGCAGAAGGTGATGGGTGGATGGAGGACAAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507638.1 |
||
| CDS TCA 90 bp | GCTGACACTTGTACATTTTCCAATATTCTGGGTAGAGTACAGTCATaGGTTCATCTACACTGGACACAGACCGTAACTGCTCCTCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ADTCTFSNILGRVQS*VHLHWTQTVTAPPD Trigger: ATCTGGAGGAGCAGTTACGGTCTGTGTCCAGTGTAGATGAACTCATGACTGTACTCTACCCAGAATATTGGAAAATGTACAAGTGTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS GCA 90 bp | CGACTCCAAACTCCTTCCCCACATCTATACACACCTCCCGTGGCATaGATTGAGTCTTTCTCCACTCATTATCAATACTTTTCAAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: RLQTPSPHLYTPPVA*IESFSTHYQYFSRS Trigger: AGATCTTGAAAAGTATTGATAATGAGTGGAGAAAGACTCAATGCATGCCACGGGAGGTGTGTATAGATGTGGGGAAGGAGTTTGGAGTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000507638.1 ENST00000618562.2 |
||
| CDS-3UTR CAA 90 bp | CTTTACAAGAGGCCTTTTGCAGATGAGCTCCAGTCCATTTCTGTAAAGTTATCCTCTTCATCCAGCTCCTaGTTTGGTCCACAGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LYKRPFADELQSISVKLSSSSSS*FGPQMS Trigger: TGACATCTGTGGACCAAACAAGGAGCTGGATGAAGA...GGATAACTTTACAGAAATGGACTGGAGCTCATCTGCAAAAGGCCTCTTGTAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS TCA 90 bp | CCAAACTCCTTCCCCACATCTATACACACCTCCCGTGGCATGCATTaGGTCTTTCTCCACTCATTATCAATACTTTTCAAGATCTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PNSFPTSIHTSRGMH*VFLHSLSILFKISV Trigger: TACAGAGATCTTGAAAAGTATTGATAATGAGTGGAGAAAGACTCAATGCATGCCACGGGAGGTGTGTATAGATGTGGGGAAGGAGTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000507638.1 ENST00000618562.2 |
||
| CDS-3UTR CAA 90 bp | CATTTCTGTAAAGTTATCCACATGGTTCAGGAAAGACAGACTTTTGTCTTTGTTTCATCAAATTCTCGGTaGGCCCCACATTGGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HFCKVIHMVQERQTFVFVSSNSR*APHWLG Trigger: CCCCAGCCAATGTGGGGCCAACCGAGAATTTGATGA...AACAAAGACAAAAGTCTGTCTTTCCTGAACCATGTGGATAACTTTACAGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CAA 90 bp | GTCCATTTCTGTAAAGTTATCCACATGGTTCAGGAAAGACAGACTTTTGTCTTTTTTCTGTCTAGTTCTTaGTGGGGTCCACAGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VHFCKVIHMVQERQTFVFFLSSS*WGPQLA Trigger: TGCCAGCTGTGGACCCCACAAAGAACTAGACAGAAA...AAAGACAAAAGTCTGTCTTTCCTGAACCATGTGGATAACTTTACAGAAATGGAC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CAA 90 bp | CTTTACAAGAGGCCTTTTGCAGATGAGCTCCAGTCCATTTCTGTAAAGTTATCCGAAAATCTTGGCTGTTaGGTCATTGGCAGAAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: LYKRPFADELQSISVKLSENLGC*VIGRKP Trigger: TGGTTTTCTGCCAATGACCAAACAGCCAAGATTTTC...GGATAACTTTACAGAAATGGACTGGAGCTCATCTGCAAAAGGCCTCTTGTAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS TCA 90 bp | CCAAAATGCAGCTTGAACATCTTCCTTCAGCTTGAACATCATTTCTaGAGATTTACCAAAGCTTTCCTGTCCAGCAAGTCTCTACAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PKCSLNIFLQLEHHF*RFTKAFLSSKSLQH Trigger: ATGCTGTAGAGACTTGCTGGACAGGAAAGCTTTGGTAAATCTTCAGAAATGATGTTCAAGCTGAAGGAAGATGTTCAAGCTGCATTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507638.1 |
||
| CDS-3UTR CAA 90 bp | CATTTCTGTAAAGTTATCCACATGGTTCAGGAAAGACAGACTTTTGTCTTTGTTTCTTCTGTCCTTGAGTaGAGGTTGGCCTGTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HFCKVIHMVQERQTFVFVSSVLE*RLACSL Trigger: CAGAGAACAGGCCAACCTCAACTCAAGGACAGAAGA...AACAAAGACAAAAGTCTGTCTTTCCTGAACCATGTGGATAACTTTACAGAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS-3UTR CAA 90 bp | GTCCATTTCTGTAAAGTTATCCACATGGTTCAGGAAAGACAGACTTTTGTCTTTAGGAAAGACAGACTTTaGTCTTTGTTAGCATGGACC | + |
|
Preference number: 5 (lower is better) Translates to: VHFCKVIHMVQERQTFVFRKDRL*SLLAWT Trigger: GGTCCATGCTAACAAAGACAAAAGTCTGTCTTTCCT...AAAGACAAAAGTCTGTCTTTCCTGAACCATGTGGATAACTTTACAGAAATGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS TCA 72 bp | GGACATCCGAGCTCCCCGCATTCGGAGCCCGCGAGGTaGAGCGAGGGCGAGGGAGGACGCCGCCGCGGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: GHPSSPHSEPAR*SEGEGGRRRGP Trigger: CGGACCGCGGCGGCGTCCTCCCTCGCCCTCGCTTCACCTCGCGGGCTCCGAATGCGGGGAGCTCGGATGTCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS GCA 72 bp | GGCGGGAGCGGGTCCGGGGCTCCGCGTTCCCAACTTTaGAGGGCGCCCTCCCAGCCAGTGCCGGGGAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGSGSGAPRSQL*RAPSQPVPGKG Trigger: GCCTTTCCCCGGCACTGGCTGGGAGGGCGCCCTGCAAAGTTGGGAACGCGGAGCCCCGGACCCGCTCCCGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
||
| CDS CAA 72 bp | CGGCGGGAGCGGGTCCGGGGCTCCGCGTTCCCAACTTaGCAGGGCGCCCTCCCAGCCAGTGCCGGGGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRERVRGSAFPT*QGALPASAGER Trigger: CCTTTCCCCGGCACTGGCTGGGAGGGCGCCCTGCAAAGTTGGGAACGCGGAGCCCCGGACCCGCTCCCGCCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS CCA 72 bp | AACACGCCACAGAGAAGAAGCCCAGCAAGTGCATGGTaGAAGGACCGGGGGTGGGGGACCGGTCCGCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: NTPQRRSPASAW*KDRGWGTGPLA Trigger: CGCCAGCGGACCGGTCCCCCACCCCCGGTCCTTCCACCATGCACTTGCTGGGCTTCTTCTCTGTGGCGTGTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS GCA 72 bp | TGTGGGGTCCACAGCTGGCAGGCCGAAGCCCCGCTCTaGAGACACACTGACAGGTCTCTTCATCCAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CGVHSWQAEAPL*RHTDRSLHPAP Trigger: AGGAGCTGGATGAAGAGACCTGTCAGTGTGTCTGCAGAGCGGGGCTTCGGCCTGCCAGCTGTGGACCCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS TCA 72 bp | CAGCTGGCAGGCCGAAGCCCCGCTCTGCAGACACACTaGCAGGTCTCTTCATCCAGCTCCTTGTTTGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: QLAGRSPALQTH*QVSSSSSLFGP Trigger: TGGACCAAACAAGGAGCTGGATGAAGAGACCTGTCAGTGTGTCTGCAGAGCGGGGCTTCGGCCTGCCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS CCA 72 bp | CAGACACACTGGCATGAGTTTCTGTCTAGTTCTTTGTaGGGTCCACAGCTGGCAGGCCGAAGCCCCGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: QTHWHEFLSSSL*GPQLAGRSPAL Trigger: CAGAGCGGGGCTTCGGCCTGCCAGCTGTGGACCCCACAAAGAACTAGACAGAAACTCATGCCAGTGTGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS CCA 72 bp | ATGAGTTTCTGTCTAGTTCTTTGTGGGGTCCACAGCTaGCAGGCCGAAGCCCCGCTCTGCAGACACACTGAC | + |
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Preference number: 6 (lower is better) Translates to: MSFCLVLCGVHS*QAEAPLCRHTD Trigger: GTCAGTGTGTCTGCAGAGCGGGGCTTCGGCCTGCCAGCTGTGGACCCCACAAAGAACTAGACAGAAACTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS GCA 72 bp | TCGTGCTGGTGTTCATGCACTGCAGCCCCTCACTATTaGAGCAACCCCCACATCTGTAGACGGACACACATG | + |
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Preference number: 6 (lower is better) Translates to: SCWCSCTAAPHY*SNPHICRRTHM Trigger: CATGTGTGTCCGTCTACAGATGTGGGGGTTGCTGCAATAGTGAGGGGCTGCAGTGCATGAACACCAGCACGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000507638.1 ENST00000618562.2 |
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| CDS CCA 72 bp | AAATCCTGGCTCACAAGCCTTCTGGCGGTTCGTACATaGCCGTCTGTAACAGCTGCATGTTTGGTGGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: KSWLTSLLAVRT*PSVTAACLVVE Trigger: TTCCACCACCAAACATGCAGCTGTTACAGACGGCCATGTACGAACCGCCAGAAGGCTTGTGAGCCAGGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS CAA 90 bp | CCGCTCTGCAGACACACTGACAGGTCTCTTCATCCAGCTCCTTGTTaGGTCCACAGATGTCATGGAATCCATCTGTTGAGTCATCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: PLCRHTDRSLHPAPC*VHRCHGIHLLSHLQ Trigger: CTGGAGATGACTCAACAGATGGATTCCATGACATCTGTGGACCAAACAAGGAGCTGGATGAAGAGACCTGTCAGTGTGTCTGCAGAGCGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS CAA 72 bp | TGGGGAAGGTCTCTTCATTCCTCTTCATATGACAGTTaGTCGAAGATTGCCCCCTTGTCCTCCATCCACCCA | + |
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Preference number: 6 (lower is better) Translates to: WGRSLHSSSYDS*SKIAPLSSIHP Trigger: TGGGTGGATGGAGGACAAGGGGGCAATCTTCGACAAACTGTCATATGAAGAGGAATGAAGAGACCTTCCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000507638.1 |
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| CDS CAA 90 bp | GGGGAAGGTCTCTTCATTCCTCTTCATATGACAGTTTGTCGAAGATaGCCCCCTTGTCCTCCATCCACCCATCACCTTCTGCAAATAGCA | + |
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Preference number: 6 (lower is better) Translates to: GEGLFIPLHMTVCRR*PPCPPSTHHLLQIA Trigger: TGCTATTTGCAGAAGGTGATGGGTGGATGGAGGACAAGGGGGCAATCTTCGACAAACTGTCATATGAAGAGGAATGAAGAGACCTTCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000507638.1 |
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| CDS CAA 90 bp | ACACAGACATGGGGAAGGTCTCTTCATTCCTCTTCATATGACAGTTaGTCGAAGATTGCCCCCTTGTCCTCCATCCACCCATCACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TQTWGRSLHSSSYDS*SKIAPLSSIHPSPS Trigger: AGAAGGTGATGGGTGGATGGAGGACAAGGGGGCAATCTTCGACAAACTGTCATATGAAGAGGAATGAAGAGACCTTCCCCATGTCTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000507638.1 |
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| CDS CCA 72 bp | ATTGCAGCAACCCCCACATCTGTAGACGGACACACATaGAGGTTTAAAGAAGGTGTTTGTCGCGACTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: IAATPTSVDGHT*RFKEGVCRDSK Trigger: TTTGGAGTCGCGACAAACACCTTCTTTAAACCTCCATGTGTGTCCGTCTACAGATGTGGGGGTTGCTGCAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507638.1 ENST00000618562.2 |
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| CDS CCA 72 bp | TCTTCATCCAGCTCCTTGTTTGGTCCACAGATGTCATaGAATCCATCTGTTGAGTCATCTCCAGCATCCGAG | + |
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Preference number: 6 (lower is better) Translates to: SSSSSLFGPQMS*NPSVESSPASE Trigger: CTCGGATGCTGGAGATGACTCAACAGATGGATTCCATGACATCTGTGGACCAAACAAGGAGCTGGATGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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| CDS CAA 90 bp | TCCAAACTCCTTCCCCACATCTATACACACCTCCCGTGGCATGCATaGAGTCTTTCTCCACTCATTATCAATACTTTTCAAGATCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: SKLLPHIYTHLPWHA*SLSPLIINTFQDLC Trigger: ACAGAGATCTTGAAAAGTATTGATAATGAGTGGAGAAAGACTCAATGCATGCCACGGGAGGTGTGTATAGATGTGGGGAAGGAGTTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000507638.1 ENST00000618562.2 |
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| CDS CAA 72 bp | CTTCCCCACATCTATACACACCTCCCGTGGCATGCATaGAGTCTTTCTCCACTCATTATCAATACTTTTCAA | + |
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Preference number: 6 (lower is better) Translates to: LPHIYTHLPWHA*SLSPLIINTFQ Trigger: TTGAAAAGTATTGATAATGAGTGGAGAAAGACTCAATGCATGCCACGGGAGGTGTGTATAGATGTGGGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000507638.1 ENST00000618562.2 |
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| CDS TCA 72 bp | TCCATCCACCCATCACCTTCTGCAAATAGCAATGACTaGTTTGACCTTTCTTTGTCCCTTCTTGAGTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SIHPSPSANSND*FDLSLSLLEFL Trigger: AAGAAACTCAAGAAGGGACAAAGAAAGGTCAAATCAGTCATTGCTATTTGCAGAAGGTGATGGGTGGATGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507638.1 |
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| CDS TCA 72 bp | TGTACATTTTCCAATATTCTGGGTAGAGTACAGTCATaGGTTCATCTACACTGGACACAGACCGTAACTGCT | + |
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Preference number: 6 (lower is better) Translates to: CTFSNILGRVQS*VHLHWTQTVTA Trigger: AGCAGTTACGGTCTGTGTCCAGTGTAGATGAACTCATGACTGTACTCTACCCAGAATATTGGAAAATGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618562.2 |
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