RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VCPIP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000175073

Ensembl transcript IDs: ENST00000310421.5

Found 315 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCCACCCTGGGAGCAGATGTGATCATCATCCTCGCAGAGAGGAATaGACAGAGAGGTCACAGAAAGCAGCGTACCAGGAGTCAGACCTA +
Preference number: 1 (lower is better)
Translates to: SHPGSRCDHHPRREE*TERSQKAAYQESDL
Trigger: TAGGTCTGACTCCTGGTACGCTGCTTTCTGTGACCTCTCTGTGCATTCCTCTCTGCGAGGATGATGATCACATCTGCTCCCAGGGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR TCA 90 bp GTTGACAATTGTGAAACCACAAGGTTACAGAAGAAATTGAGGCCTTaGAAGGCTCCAAGACTTGCCTTGGGTCACAGAGCACACTGTCGG +
Preference number: 1 (lower is better)
Translates to: VDNCETTRLQKKLRP*KAPRLALGHRAHCR
Trigger: CCGACAGTGTGCTCTGTGACCCAAGGCAAGTCTTGGAGCCTTTCAAGGCCTCAATTTCTTCTGTAACCTTGTGGTTTCACAATTGTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR TCA 90 bp ATGTCACTTGTCCCATCAGCACTATGCCCTCTGCAAGTAAGACTATaGCGACAATGGTCGGCAGAACAAAAGGTTGACAATTGTGAAACC +
Preference number: 1 (lower is better)
Translates to: MSLVPSALCPLQVRL*RQWSAEQKVDNCET
Trigger: GGTTTCACAATTGTCAACCTTTTGTTCTGCCGACCATTGTCGTCATAGTCTTACTTGCAGAGGGCATAGTGCTGATGGGACAAGTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR TCA 90 bp AACAAAAGGTTGACAATTGTGAAACCACAAGGTTACAGAAGAAATTaGGGCCTTGAAAGGCTCCAAGACTTGCCTTGGGTCACAGAGCAC +
Preference number: 1 (lower is better)
Translates to: NKRLTIVKPQGYRRN*GLERLQDLPWVTEH
Trigger: GTGCTCTGTGACCCAAGGCAAGTCTTGGAGCCTTTCAAGGCCTCAATTTCTTCTGTAACCTTGTGGTTTCACAATTGTCAACCTTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR CCA 90 bp ATTGCAAGCAGTAGGCTTGACTGTAAAAACCAAACTAAAAATCACTaGAAGACACAGAGCCAGTATCAGTCAATAGCATTTGCTAACTTT +
Preference number: 1 (lower is better)
Translates to: IASSRLDCKNQTKNH*KTQSQYQSIAFANF
Trigger: AAAGTTAGCAAATGCTATTGACTGATACTGGCTCTGTGTCTTCCAGTGATTTTTAGTTTGGTTTTTACAGTCAAGCCTACTGCTTGCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR TCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAGGAGGGCAGATCACTTaGGCTCAGGGGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: CEDLSHLMATELYHITLTGGQIT*AQGFKT
Trigger: GGTCTTGAACCCCTGAGCTCAAGTGATCTGCCCTCC...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR CCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTACTAAAGAAATTTTGCTaGCAGGGTGCGGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: PCEDLSHLMATELYHITLLKKFC*QGAVAH
Trigger: GTGAGCCACCGCACCCTGCCAGCAAAATTTCTTTAG...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR GCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTATGCATCTGTTACATGTaGAAACAGAGACAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: PCEDLSHLMATELYHITLCICYM*KQRQPG
Trigger: GCCTGGCTGTCTCTGTTTGCACATGTAACAGATGCA...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR GCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTACTGAGATGTCTAGCTTaGACGCCAAGATGTGGCTAT +
Preference number: 2 (lower is better)
Translates to: PCEDLSHLMATELYHITLLRCLA*TPRCGY
Trigger: ATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAG...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR CCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAGGCAATAAGGACCTGTaGCCAGGAATTACAGATGCA +
Preference number: 2 (lower is better)
Translates to: PCEDLSHLMATELYHITLGNKDL*PGITDA
Trigger: TGCATCTGTAATTCCTGGCCACAGGTCCTTATTGCC...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR TCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATCAGCTGATCAGGGTGTaGTGCAGTAAAATTTGCATC +
Preference number: 2 (lower is better)
Translates to: QIYLRCLACTPRCGYITNQLIRV*CSKICI
Trigger: GATGCAAATTTTACTGCATCACACCCTGATCAGCTG...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR GCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTACAACCTTTTCAGTCTTaGATTGCTCTACCACAGGCA +
Preference number: 2 (lower is better)
Translates to: PCEDLSHLMATELYHITLQPFQS*IALPQA
Trigger: TGCCTGTGGTAGAGCAATGCAAGACTGAAAAGGTTG...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR TCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAAAGCAAATACCCAGCTaGTCAGGGTGTGATGCAGTA +
Preference number: 2 (lower is better)
Translates to: CEDLSHLMATELYHITLTKQIPS*SGCDAV
Trigger: TACTGCATCACACCCTGATCAGCTGGGTATTTGCTT...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR GCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACATGTCTAAAGAAATTTTaGTGGCAGGGTGCGGTGGCT +
Preference number: 2 (lower is better)
Translates to: CEDLSHLMATELYHITLTCLKKF*WQGAVA
Trigger: AGCCACCGCACCCTGCCAGCAAAATTTCTTTAGACA...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR CCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACACTAATCAAGTTACGTaGCCCAGCCAACAAATATTA +
Preference number: 2 (lower is better)
Translates to: LGSSILKAMANHTLAIMHTNQVT*PSQQIL
Trigger: TAATATTTGTTGGCTGGGCCACGTAACTTGATTAGT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR CCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAACACACAATTGGCTGTaGCTCAGACAGCAACACAAC +
Preference number: 2 (lower is better)
Translates to: CEDLSHLMATELYHITLTTHNWL*LRQQHN
Trigger: GTTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGT...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR TCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAAAATCAGGTTGTTCTTaGCCAAGCCAGGAATCAAAA +
Preference number: 2 (lower is better)
Translates to: PCEDLSHLMATELYHITLKSGCS*PSQESK
Trigger: TTTTGATTCCTGGCTTGGTCAAGAACAACCTGATTT...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR TCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTACAAGGAAACTGGCACTaGAGATTTGATGAATACACT +
Preference number: 2 (lower is better)
Translates to: PCEDLSHLMATELYHITLQGNWH*RFDEYT
Trigger: AGTGTATTCATCAAATCTTCAGTGCCAGTTTCCTTG...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR CCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACATTGCACGCCAAGATGTaGCTATATCACAAATGGCAG +
Preference number: 2 (lower is better)
Translates to: CEDLSHLMATELYHITLTLHAKM*LYHKWQ
Trigger: CTGCCATTTGTGATATAGCCACATCTTGGCGTGCAA...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR TCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAAGACAGCAACACAACTaGATCACATTGACCTCATCA +
Preference number: 2 (lower is better)
Translates to: CEDLSHLMATELYHITLTRQQHN*ITLTSS
Trigger: TGATGAGGTCAATGTGATTCAGTTGTGTTGCTGTCT...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR TCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAGAGAAGAATATGGGTTaGAATGTACACTTCAGGATA +
Preference number: 2 (lower is better)
Translates to: PCEDLSHLMATELYHITLEKNMG*NVHFRI
Trigger: TATCCTGAAGTGTACATTTCAACCCATATTCTTCTC...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR GCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAAAGATGACCAAAATCTaGCTTATCTGGAAACACAAG +
Preference number: 2 (lower is better)
Translates to: PCEDLSHLMATELYHITLKMTKI*LIWKHK
Trigger: CTTGTGTTTCCAGATAAGGCAGATTTTGGTCATCTT...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR GCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTATTTTCAGTCTTGCATTaGTCTACCACAGGCATAATA +
Preference number: 2 (lower is better)
Translates to: PCEDLSHLMATELYHITLFSVLH*STTGII
Trigger: TATTATGCCTGTGGTAGAGCAATGCAAGACTGAAAA...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR CCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACACTTTGTGAGGATACCTaGCCTACTTCTCAAAAACCA +
Preference number: 2 (lower is better)
Translates to: CEDLSHLMATELYHITLTLCEDT*PTSQKP
Trigger: TGGTTTTTGAGAAGTAGGCCAGGTATCCTCACAAAG...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR TCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACATCCAATAAAAATATCTaGAACAGAGTGAAGCGGGAG +
Preference number: 2 (lower is better)
Translates to: CEDLSHLMATELYHITLTSNKNI*NRVKRE
Trigger: CTCCCGCTTCACTCTGTTTCAGATATTTTTATTGGA...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR GCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAATAAACACTTTATGCTaGCACTATATTGACCAGTTG +
Preference number: 2 (lower is better)
Translates to: PCEDLSHLMATELYHITLINTLC*HYIDQL
Trigger: CAACTGGTCAATATAGTGGCAGCATAAAGTGTTTAT...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR CCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATAATGAACCACATATATaGAAGAAAGTCATCTCAGCA +
Preference number: 2 (lower is better)
Translates to: QIYLRCLACTPRCGYITNNEPHI*KKVISA
Trigger: TGCTGAGATGACTTTCTTCCATATATGTGGTTCATT...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR GCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACATCAGGACGAGATTTCTaGATTCTAAAGAAAAGTAGG +
Preference number: 2 (lower is better)
Translates to: CEDLSHLMATELYHITLTSGRDF*ILKKSR
Trigger: CCTACTTTTCTTTAGAATGCAGAAATCTCGTCCTGA...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR CCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACACAAACTAAAAATCACTaGAAGACACAGAGCCAGTAT +
Preference number: 2 (lower is better)
Translates to: CEDLSHLMATELYHITLTQTKNH*KTQSQY
Trigger: ATACTGGCTCTGTGTCTTCCAGTGATTTTTAGTTTG...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR GCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACATTACAAACACAGTTCTaGATCTGTTACATGTGCAAA +
Preference number: 2 (lower is better)
Translates to: CEDLSHLMATELYHITLTLQTQF*ICYMCK
Trigger: TTTGCACATGTAACAGATGCAGAACTGTGTTTGTAA...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR CCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAGAACAGAGAAGAATATaGGTTGAAATGTACACTTCA +
Preference number: 2 (lower is better)
Translates to: CEDLSHLMATELYHITLTEQRRI*VEMYTS
Trigger: TGAAGTGTACATTTCAACCCATATTCTTCTCTGTTC...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR GCA 72 bp GGGAGCAGATGTGATCATCATCCTCGCAGAGAGGAATaGACAGAGAGGTCACAGAAAGCAGCGTACCAGGAG +
Preference number: 3 (lower is better)
Translates to: GSRCDHHPRREE*TERSQKAAYQE
Trigger: CTCCTGGTACGCTGCTTTCTGTGACCTCTCTGTGCATTCCTCTCTGCGAGGATGATGATCACATCTGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR TCA 72 bp TTAACTCATTTAAGACAGCCACCCTGGGAGCAGATGTaGTCATCATCCTCGCAGAGAGGAATGCACAGAGAG +
Preference number: 3 (lower is better)
Translates to: LTHLRQPPWEQM*SSSSQRGMHRE
Trigger: CTCTCTGTGCATTCCTCTCTGCGAGGATGATGATCACATCTGCTCCCAGGGTGGCTGTCTTAAATGAGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR TCA 72 bp GTCCCATCAGCACTATGCCCTCTGCAAGTAAGACTATaGCGACAATGGTCGGCAGAACAAAAGGTTGACAAT +
Preference number: 3 (lower is better)
Translates to: VPSALCPLQVRL*RQWSAEQKVDN
Trigger: ATTGTCAACCTTTTGTTCTGCCGACCATTGTCGTCATAGTCTTACTTGCAGAGGGCATAGTGCTGATGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR TCA 72 bp CAGGCCTCTACCCTAACATTTTCCAATAAAAATATCTaGAACAGAGTGAAGCGGGAGAAATGGGTTTGCTCT +
Preference number: 3 (lower is better)
Translates to: QASTLTFSNKNI*NRVKREKWVCS
Trigger: AGAGCAAACCCATTTCTCCCGCTTCACTCTGTTTCAGATATTTTTATTGGAAAATGTTAGGGTAGAGGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR CAA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAAGAGACAGCCAGGCTTaGAATGCTCTAGGTAAGAGA +
Preference number: 3 (lower is better)
Translates to: CEDLSHLMATELYHITLTRDSQA*NALGKR
Trigger: TCTCTTACCTAGAGCATTCAAAGCCTGGCTGTCTCT...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR TCA 72 bp ATAAGCATGAAAGCTGCTTCTCAAGGAAACTGGCACTaGAGATTTGATGAATACACTAAGCAAATACCCAGC +
Preference number: 3 (lower is better)
Translates to: ISMKAASQGNWH*RFDEYTKQIPS
Trigger: GCTGGGTATTTGCTTAGTGTATTCATCAAATCTTCAGTGCCAGTTTCCTTGAGAAGCAGCTTTCATGCTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR CAA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACACTTTTCAGTCTTGCATaGCTCTACCACAGGCATAAT +
Preference number: 3 (lower is better)
Translates to: CEDLSHLMATELYHITLTLFSLA*LYHRHN
Trigger: ATTATGCCTGTGGTAGAGCAATGCAAGACTGAAAAG...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR CCA 72 bp GTTTTTGAGAATTCTATTCTGATGGTATGTGACCAATaGCATGCATATACAAGACCTCAAGTCCAAGTTTGG +
Preference number: 3 (lower is better)
Translates to: VFENSILMVCDQ*HAYTRPQVQVW
Trigger: CCAAACTTGGACTTGAGGTCTTGTATATGCATGCCATTGGTCACATACCATCAGAATAGAATTCTCAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR-3UTR CAA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAACTGGCACTGAAGATTaGATGAATACACTAAGCAAA +
Preference number: 3 (lower is better)
Translates to: CEDLSHLMATELYHITLTTGTED*MNTLSK
Trigger: TTTGCTTAGTGTATTCATCAAATCTTCAGTGCCAGT...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR CCA 72 bp TACTTTCACAGAAAGATGACCAAAATCTGCCTTATCTaGAAACACAAGTTAAAGTACTGTCTATATCCCTTA +
Preference number: 3 (lower is better)
Translates to: YFHRKMTKICLI*KHKLKYCLYPL
Trigger: TAAGGGATATAGACAGTACTTTAACTTGTGTTTCCAGATAAGGCAGATTTTGGTCATCTTTCTGTGAAAGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACGGACGACGGAGTCTGTaGAGCCTCAGGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHGRRSL*SLRGRR
Trigger: CCTCCTCCCCCTGAGGCTCCACAGACTCCGTCGTCC...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTACCCAGCAGCTGTTGCTaGTCGTGCCGCTGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: PCEDLSHLMATELYHITLPSSCC*SCRWPH
Trigger: GTGCGGCCAGCGGCACGAGCAGCAACAGCTGCTGGG...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAACGGTACACTCGATGCTaGCAGAACCGGAGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQRYTRC*QNRRPG
Trigger: TCCCGGCCTCCGGTTCTGTCAGCATCGAGTGTACCG...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATTGCTGCTCGTGCCGCTaGCCGCACTCGGTACACTCG +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNCCSCR*PHSVHS
Trigger: CGAGTGTACCGAGTGCGGCCAGCGGCACGAGCAGCA...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACGGAGGGCAGATCACTTaGGCTCAGGGGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHGGQIT*AQGFKT
Trigger: GGTCTTGAACCCCTGAGCTCAAGTGATCTGCCCTCC...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAAGCTGTTGCTGCTCGTaGCGCTGGCCGCACTCGGTA +
Preference number: 4 (lower is better)
Translates to: PCEDLSHLMATELYHITLSCCCS*RWPHSV
Trigger: TACCGAGTGCGGCCAGCGGCACGAGCAGCAACAGCT...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACAAAAATAGACGCGCCTaGCACTTCGGATCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHKNRRA*HFGSGQ
Trigger: CTGCCCGGATCCGAAGTGTCAGGCGCGTCTATTTTT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACGACTGCTCTGTACTTTaGTCCCGAAGGTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHDCSVL*SRRCLS
Trigger: GGACAGGCACCTTCGGGATCAAAGTACAGAGCAGTC...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATCGTGTTCTTCTTGGGTaGCCCCGTAACCCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNRVLLG*PRNPEQ
Trigger: CTGCTCGGGGTTACGGGGGCACCCAAGAAGAACACG...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACGGTTCAAGACCGGCCTaGGCAACATGGCAAAACCCT +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHGSRPA*ATWQNP
Trigger: AGGGTTTTGCCATGTTGCCCAGGCCGGTCTTGAACC...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATCATGCTCTGGTTCTATaGGGAAGGCGCGGTCACCCA +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNHALVL*GRRGHP
Trigger: TGGGTGACCGCGCCTTCCTCATAGAACCAGAGCATG...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACCGGGCCAGGTGCTGCTaGAAGTGCTGTTTAAGATTC +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHRARCC*KCCLRF
Trigger: GAATCTTAAACAGCACTTTCAGCAGCACCTGGCCCG...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAATCATGGAACAGAGCTTaGTATCGGGCCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQSWNRA*YRARCC
Trigger: GCAGCACCTGGCCCGATATCAAGCTCTGTTCCATGA...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAAACTTCTCTGCAGGGATaGGCCCAGGTAGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQTSLQG*AQVERW
Trigger: CCACCTTTCTACCTGGGCTCATCCCTGCAGAGAAGT...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACACACTGCCGTAGCCGTTaGCCCGAACGTAACGGCCAC +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTHCRSR*PERNGH
Trigger: GTGGCCGTTACGTTCGGGGCAACGGCTACGGCAGTG...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACTTCTTACTTCTCCACTaGCGTAGCCGTTGCCCCGAA +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHFLLLH*RSRCPE
Trigger: TTCGGGGCAACGGCTACGGCAGTGGAGAAGTAAGAA...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATGCCCGAGACACAGCATaGACCAAGCAGTGTCCATCC +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNARDTA*TKQCPS
Trigger: GGATGGACACTGCTTGGTGCATGCTGTGTCTCGGGC...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAAGGTAGGTGTAGCAGGTaGAGAGGATGGACCATCACG +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQGRCSR*RGWTIT
Trigger: CGTGATGGTCCATCCTCTGCACCTGCTACACCTACC...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATCTGAGACATAGCTCCTaGCTCTCGTGTCTCGCTCCG +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNLRHSS*LSCLAP
Trigger: CGGAGCGAGACACGAGAGCCAGGAGCTATGTCTCAG...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACGGGAACACCCTCAGGTaGTACAAACAGAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHGNTLR*YKQRVT
Trigger: TGTGACCCTCTGTTTGTACCACCTGAGGGTGTTCCC...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATTTTCACAGTGTGGGCTaGGTGTGCTGCAGCAGACTG +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNFHSVG*VCCSRL
Trigger: CAGTCTGCTGCAGCACACTCAGCCCACACTGTGAAA...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAATCCCCTTTGTGCTTTTaGCCTTGTGGCAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQSPLCF*PCGKGC
Trigger: GCAGCCTTTGCCACAAGGTCAAAAGCACAAAGGGGA...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAACCATCCCCGTCCACATaGACTGGAATGAGACATTCC +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQPSPST*TGMRHS
Trigger: GGAATGTCTCATTCCAGTGCATGTGGACGGGGATGG...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTACCTTGTGGCAAAGGCTaGTCCCAGTGCATCTGCTAC +
Preference number: 4 (lower is better)
Translates to: PCEDLSHLMATELYHITLPCGKG*SQCICY
Trigger: GTAGCAGATGCACTGGGAGCAGCCTTTGCCACAAGG...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTATCGAACAGTTCGCCCTaGTTCATGTCCCGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PCEDLSHLMATELYHITLSNSSP*FMSRRS
Trigger: GCTTCTCCGGGACATGAACCAGGGCGAACTGTTCGA...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACTCTTGTTTCACAGTGTaGGCTGAGTGTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHSCFTV*AECAAA
Trigger: TGCTGCAGCACACTCAGCCCACACTGTGAAACAAGA...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAATGTGCTGCAGCAGACTaGCCACCTTCAGCTTTACTT +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQCAAAD*PPSALL
Trigger: AAGTAAAGCTGAAGGTGGTCAGTCTGCTGCAGCACA...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAATCAGGCAAACCAGTCTaGAGACTCCCAGACTTTGCA +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQSGKPV*RLPDFA
Trigger: TGCAAAGTCTGGGAGTCTTCAGACTGGTTTGCCTGA...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACAAGCAAATACCCAGCTaGTCAGGGTGTGATGCAGTA +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHKQIPS*SGCDAV
Trigger: TACTGCATCACACCCTGATCAGCTGGGTATTTGCTT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACAAGAAATTGAGGCCTTaGAAGGCTCCAAGACTTGCC +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHKKLRP*KAPRLA
Trigger: GGCAAGTCTTGGAGCCTTTCAAGGCCTCAATTTCTT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACCAGGATCAAGCTGCCTaGCGTCTCTCATTGTTACTA +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHQDQAA*RLSLLL
Trigger: TAGTAACAATGAGAGACGGCAGGCAGCTTGATCCTG...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAATGCTCCCAGTGCATCTaGTACACAGCCATCAGTTGT +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQCSQCI*YTAISC
Trigger: ACAACTGATGGCTGTGTAGCAGATGCACTGGGAGCA...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATAAAGGCTGCTCCCAGTaGATCTGCTACACAGCCATC +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNKGCSQ*ICYTAI
Trigger: GATGGCTGTGTAGCAGATGCACTGGGAGCAGCCTTT...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACCTGAGATGTCTAGCTTaGACGCCAAGATGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHLRCLA*TPRCGY
Trigger: ATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAG...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACATGTCCCGGAGAAGCTTaGCCCGGCCTGTCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTCPGEA*PGLSVC
Trigger: ACAAACAGACAGGCCGGGCCAAGCTTCTCCGGGACA...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACAGTGTTAACATGCTCTaGTTCTATGAGGAAGGCGCG +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHSVNML*FYEEGA
Trigger: CGCGCCTTCCTCATAGAACCAGAGCATGTTAACACT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATCCCGTCCACATGCACTaGAATGAGACATTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNPVHMH*NETFLA
Trigger: AGCCAGGAATGTCTCATTCCAGTGCATGTGGACGGG...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACATGGACCATCACGAATaGTACTGGGAGAAACAGTCC +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHMDHHE*YWEKQS
Trigger: GGACTGTTTCTCCCAGTACCATTCGTGATGGTCCAT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAGTGCTTTTGACCTTGTaGCAAAGGCTGCTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PCEDLSHLMATELYHITLVLLTL*QRLLPV
Trigger: CACTGGGAGCAGCCTTTGCCACAAGGTCAAAAGCAC...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACGGCAATAAGGACCTGTaGCCAGGAATTACAGATGCA +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHGNKDL*PGITDA
Trigger: TGCATCTGTAATTCCTGGCCACAGGTCCTTATTGCC...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATCTCCAAGACTTGCCTTaGGTCACAGAGCACACTGTC +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNLQDLP*VTEHTV
Trigger: GACAGTGTGCTCTGTGACCCAAGGCAAGTCTTGGAG...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAACAGAATTGCAGTTGCTaGGGTCTGAAAGAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQQNCSC*GLKEPD
Trigger: GTCTGGCTCTTTCAGACCCCAGCAACTGCAATTCTG...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
3UTR CAA 72 bp CAAGACTTGCCTTGGGTCACAGAGCACACTGTCGGTTaGAGATTCTCAGTGTTGCACATGGTCATAAATGTT +
Preference number: 4 (lower is better)
Translates to: QDLPWVTEHTVG*RFSVLHMVINV
Trigger: AACATTTATGACCATGTGCAACACTGAGAATCTCAAACCGACAGTGTGCTCTGTGACCCAAGGCAAGTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACGTGTGGACAACTTTCTaGACTAGGATTTCACTCCCA +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHVWTTF*TRISLP
Trigger: TGGGAGTGAAATCCTAGTTCAGAAAGTTGTCCACAC...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAATGGGAGCTGAGACTCTaGTTCTTGTCCTTGAACATC +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQWELRL*FLSLNI
Trigger: GATGTTCAAGGACAAGAATCAGAGTCTCAGCTCCCA...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATCTTAGAAGTTGTCGGTaGATAGGGAGCCTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNLRSCR*IGSLGR
Trigger: CCTACCAAGGCTCCCTATTCACCGACAACTTCTAAG...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATGCCTCTGCTCGAACCTaGCTTACAGCCTCTTTAACT +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNASART*LTASLT
Trigger: AGTTAAAGAGGCTGTAAGTCAGGTTCGAGCAGAGGC...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACAAGGTGCCTGTCCATTaGAGCCTGAATAGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHKVPVH*SLNRRN
Trigger: GTTTCTTCTATTCAGGCTTCAATGGACAGGCACCTT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAAAGCACACTGTCGGTTTaGGATTCTCAGTGTTGCACA +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQSTLSV*DSQCCT
Trigger: TGTGCAACACTGAGAATCTCAAACCGACAGTGTGCT...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAACTGCAAGTAAGACTATaGCGACAATGGTCGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQLQVRL*RQWSAE
Trigger: TTCTGCCGACCATTGTCGTCATAGTCTTACTTGCAG...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAAGCAGTTGCTGGGGTCTaGAAGAGCCAGACAATAAAA +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQAVAGV*KSQTIK
Trigger: TTTTATTGTCTGGCTCTTTCAGACCCCAGCAACTGC...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTATTCTCTCTTAAGGCATaGCAGAAGAGCTCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: PCEDLSHLMATELYHITLFSLKA*QKSSRP
Trigger: AGGCCGAGAGCTCTTCTGGCATGCCTTAAGAGAGAA...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACCTGAGGCACACCCCATaGTTTAGGAAGCAAATTCAT +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHLRHTP*FRKQIH
Trigger: ATGAATTTGCTTCCTAAAGCATGGGGTGTGCCTCAG...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAACCTTTCGCACAGATGTaGCATGGCACCAATTACAAG +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQPFAQM*HGTNYK
Trigger: CTTGTAATTGGTGCCATGGCACATCTGTGCGAAAGG...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACGTAATTCTGTCGCCATaGTGTAAAGGAACTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHVILSP*CKGTGS
Trigger: GGAACCAGTTCCTTTACAGCATGGCGACAGAATTAC...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACAATGGGGAAATGTCCTaGAGCATCCACACACAATTC +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHNGEMS*SIHTQF
Trigger: GAATTGTGTGTGGATGCTGCAGGACATTTCCCCATT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAATCTTGTAGTAGCCTCTaGTCGAACCTGACTTACAGC +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQSCSSL*SNLTYS
Trigger: GCTGTAAGTCAGGTTCGAGCAGAGGCTACTACAAGA...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTACCTCGCAGAGAGGAATaGACAGAGAGGTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: PCEDLSHLMATELYHITLPRREE*TERSQK
Trigger: TTTCTGTGACCTCTCTGTGCATTCCTCTCTGCGAGG...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAAAAGGCTCCAAGACTTaGCTTGGGTCACAGAGCACA +
Preference number: 4 (lower is better)
Translates to: PCEDLSHLMATELYHITLKGSKT*LGSQST
Trigger: TGTGCTCTGTGACCCAAGGCAAGTCTTGGAGCCTTT...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAAAGGAGCCAACCACTCTaGAGGAACATGAAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQRSQPL*RNMKFR
Trigger: TCTGAACTTCATGTTCCTCCAGAGTGGTTGGCTCCT...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAACAACATCAGGACCAATaGGGAAATGTCCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQQHQDQ*GNVLQH
Trigger: ATGCTGCAGGACATTTCCCCATTGGTCCTGATGTTG...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAATCTTGGATCAAGGTGTaGGTTACCAGATGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQSWIKV*VTRCSS
Trigger: GGAACTGCATCTGGTAACCCACACCTTGATCCAAGA...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATCTAAAGAAATTTTGCTaGCAGGGTGCGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNLKKFC*QGAVAH
Trigger: GTGAGCCACCGCACCCTGCCAGCAAAATTTCTTTAG...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAGTGACTTCCTCAGGCTaGACTCCTATCACTCCAGTC +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTVTSSG*TPITPV
Trigger: GACTGGAGTGATAGGAGTTCAGCCTGAGGAAGTCAC...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAAAGGAAGATCAGATGGTaGCTGCTCTGTACTTTGATC +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQRKIRW*LLCTLI
Trigger: GATCAAAGTACAGAGCAGTCACCATCTGATCTTCCT...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAACAGCTGATCAGGGTGTaGTGCAGTAAAATTTGCATC +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQQLIRV*CSKICI
Trigger: GATGCAAATTTTACTGCATCACACCCTGATCAGCTG...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACTCTAAAACTTCTTTGTaGGGATACCTGGCCTACTTC +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHSKTSL*GYLAYF
Trigger: GAAGTAGGCCAGGTATCCTCACAAAGAAGTTTTAGA...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAATGGGCGACAACAATTTaGAGTGATAGTTGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQWATTI*SDSWKG
Trigger: GCCTTTCCAACTATCACTGCAAATTGTTGTCGCCCA...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAAGAAAAGTACAATGCTTaGCATCAGCCATACCCATGG +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQEKYNA*HQPYPW
Trigger: CCATGGGTATGGCTGATGGCAAGCATTGTACTTTTC...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAATGTGGAAAAGTACAATaGTTGCCATCAGCCATACCC +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQCGKVQ*LPSAIP
Trigger: GGGTATGGCTGATGGCAAGCATTGTACTTTTCCACA...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACGGCCAATCACACACTTaGTATCATGCACTGAATAAC +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHGQSHT*YHALNN
Trigger: GTTATTCAGTGCATGATAGCAAGTGTGTGATTGGCC...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATTGCATCTGTTACATGTaGAAACAGAGACAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNCICYM*KQRQPG
Trigger: GCCTGGCTGTCTCTGTTTGCACATGTAACAGATGCA...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAACAACCTTTTCAGTCTTaGATTGCTCTACCACAGGCA +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQQPFQS*IALPQA
Trigger: TGCCTGTGGTAGAGCAATGCAAGACTGAAAAGGTTG...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATTGTCTAAAGAAATTTTaGTGGCAGGGTGCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNCLKKF*WQGAVA
Trigger: AGCCACCGCACCCTGCCAGCAAAATTTCTTTAGACA...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAAGGAATGAGACATTCCTaGCTTTTATTGGCCCGCTTA +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQGMRHS*LLLARL
Trigger: TAAGCGGGCCAATAAAAGCCAGGAATGTCTCATTCC...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACACTCCCAAATTCACCTaGAAAGTGCTTGGTAACAAG +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHTPKFT*KVLGNK
Trigger: CTTGTTACCAAGCACTTTCCAGGTGAATTTGGGAGT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAATTTGCCAGGCAGATGTaGAAAAGTACAATGCTTGCC +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQFARQM*KSTMLA
Trigger: GGCAAGCATTGTACTTTTCCACATCTGCCTGGCAAA...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAATTGCACGCCAAGATGTaGCTATATCACAAATGGCAG +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQLHAKM*LYHKWQ
Trigger: CTGCCATTTGTGATATAGCCACATCTTGGCGTGCAA...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACGTGAAGCGGGAGAAATaGGTTTGCTCTTTAACTAGT +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHVKREK*VCSLTS
Trigger: ACTAGTTAAAGAGCAAACCCATTTCTCCCGCTTCAC...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAAATTGGTTTGTTCAAATaGCCATCTTTCCCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQIGLFK*PSFPVH
Trigger: GTGCACTGGGAAAGATGGTCATTTGAACAAACCAAT...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACCAGAGCAAACATTTGTaGAGGCGATTATCCATTACT +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHQSKHL*RRLSIT
Trigger: AGTAATGGATAATCGCCTTCACAAATGTTTGCTCTG...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACACACTCTGGAGGAACATaGAGTTCAGAAAGGGCACCA +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTHSGGT*SSERAP
Trigger: TGGTGCCCTTTCTGAACTTCATGTTCCTCCAGAGTG...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACCAAGGAAACTGGCACTaGAGATTTGATGAATACACT +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHQGNWH*RFDEYT
Trigger: AGTGTATTCATCAAATCTTCAGTGCCAGTTTCCTTG...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACCCACTTAATGGCAACTaGACTCTACCACATTACATT +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHPLNGN*TLPHYI
Trigger: AATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGG...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACTTGAGAATTCTATTCTaGTGGTATGTGACCAATGGC +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHLRILF*WYVTNG
Trigger: GCCATTGGTCACATACCATCAGAATAGAATTCTCAA...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACATCCTCCAGAGTGTCATaGAAATACAGGAGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTSSRVS*KYRRLP
Trigger: CGGAAGCCTCCTGTATTTGCATGACACTCTGGAGGA...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAAAATCAGGATCAAGCTaGCTGCCGTCTCTCATTGTT +
Preference number: 4 (lower is better)
Translates to: PCEDLSHLMATELYHITLKSGSS*LPSLIV
Trigger: AACAATGAGAGACGGCAGGCAGCTTGATCCTGATTT...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACAATAAGCATGAAAGCTaGTTCTCAAGGAAACTGGCA +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHNKHES*FSRKLA
Trigger: TGCCAGTTTCCTTGAGAAGCAGCTTTCATGCTTATT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACGCAACCAAACTAGGATaGATACCATGTTTGTCCATA +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHATKLG*IPCLSI
Trigger: TATGGACAAACATGGTATCCATCCTAGTTTGGTTGC...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACACTCATTCCATAGTCTaGTACCAGAACATCTTTCAC +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHTHSIV*YQNIFH
Trigger: GTGAAAGATGTTCTGGTACCAGACTATGGAATGAGT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATTGGGAGAAACAGTCCTaGGTTGCCCTTTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNWEKQS*VALFVL
Trigger: AAGAACAAAAAGGGCAACCCAGGACTGTTTCTCCCA...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAAGCAGGTGCAGAGGATaGACCATCACGAATGGTACT +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTSRCRG*TITNGT
Trigger: AGTACCATTCGTGATGGTCCATCCTCTGCACCTGCT...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAGTCCTCAGCTGTCCATaGGTACTTTTTGCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTVLSCP*VLFARL
Trigger: TAACCTGGCAAAAAGTACTCATGGACAGCTGAGGAC...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAATTCTTTTTGGCAGTCTaGTGCAATATAGTGTGGACA +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQFFLAV*CNIVWT
Trigger: TGTCCACACTATATTGCATCAGACTGCCAAAAAGAA...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATCTGAAGTTCCTTAGATaGCAGTTTACCAGTAACAGC +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNLKFLR*QFTSNS
Trigger: GCTGTTACTGGTAAACTGTCATCTAAGGAACTTCAG...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTATTTTCAGCTTGCTCCTaGAGTTCCTTAGATGACAGT +
Preference number: 4 (lower is better)
Translates to: PCEDLSHLMATELYHITLFSACS*SSLDDS
Trigger: ACTGTCATCTAAGGAACTTCAGGAGCAAGCTGAAAA...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACAAGGCAGTTACGTTATaGAGTTGCTCAGATTTCTTT +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHKAVTL*SCSDFF
Trigger: AAAGAAATCTGAGCAACTTCATAACGTAACTGCCTT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAATGCTTTCTTACAACTaGAGTTTCCCTAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PCEDLSHLMATELYHITLMLSYN*SFPSSW
Trigger: CCAAGAGCTAGGGAAACTTCAGTTGTAAGAAAGCAT...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACTTTGACACTAGTATATaGGATGGTTACCTTGATGAC +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHFDTSI*DGYLDD
Trigger: GTCATCAAGGTAACCATCTCATATACTAGTGTCAAA...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAAGACAGCAACACAACTaGATCACATTGACCTCATCA +
Preference number: 4 (lower is better)
Translates to: PCEDLSHLMATELYHITLRQQHN*ITLTSS
Trigger: TGATGAGGTCAATGTGATTCAGTTGTGTTGCTGTCT...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAAGCATCTAAACCCAAGTaGAGCCAACAAATAAACTCT +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQASKPK*SQQINS
Trigger: AGAGTTTATTTGTTGGCTTCACTTGGGTTTAGATGC...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACTGTCTATATCCCTTATaGATCAACAGGCAGAGATTT +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHCLYPL*INRQRF
Trigger: AAATCTCTGCCTGTTGATTCATAAGGGATATAGACA...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACACTTTCACAGAAAGATaGCCAAAATCTGCCTTATCT +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHTFTER*PKSALS
Trigger: AGATAAGGCAGATTTTGGTCATCTTTCTGTGAAAGT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATATATCTGAAACAGAGTaGAGCGGGAGAAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNISETE*SGRNGF
Trigger: AAACCCATTTCTCCCGCTTCACTCTGTTTCAGATAT...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAGCAAGTGATCTTCCCTaGGGTAAGAGACCATATGCA +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTASDLP*GKRPYA
Trigger: TGCATATGGTCTCTTACCTCAGGGAAGATCACTTGC...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACTATAACTTACATGGGTaGTATAGTTCCCCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHYNLHG*YSSPLL
Trigger: CAACAAAGGGGAACTATATCACCCATGTAAGTTATA...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAGGTTTCTACCGGAGCTaGTCCATGCAATACAGATTG +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTGFYRS*SMQYRL
Trigger: CAATCTGTATTGCATGGAGCAGCTCCGGTAGAAACC...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACTCCATGAGTACTTTTTaGCAGGTTATACAATTTCCC +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHSMSTF*QVIQFP
Trigger: GGGAAATTGTATAACCTGGCAAAAAGTACTCATGGA...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATTCTGTTTTCCGTTTCTaGATTACAGAAGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNSVFRF*ITEACS
Trigger: GGAACAGGCTTCTGTAATGCAGAAACGGAAAACAGA...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAGTGAGGAAGTCCCTTTaGATAAGACCATACATCTTC +
Preference number: 4 (lower is better)
Translates to: PCEDLSHLMATELYHITLVRKSL*IRPYIF
Trigger: GAAGATGTATGGTCTTATGCAAAGGGACTTCCTCAC...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAAAGACTCCCAGACTTTaGAGAAGAACTCACAACTTC +
Preference number: 4 (lower is better)
Translates to: PCEDLSHLMATELYHITLKTPRL*RRTHNF
Trigger: GAAGTTGTGAGTTCTTCTGCAAAGTCTGGGAGTCTT...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACAAGATGACCAAAATCTaGCTTATCTGGAAACACAAG +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHKMTKI*LIWKHK
Trigger: CTTGTGTTTCCAGATAAGGCAGATTTTGGTCATCTT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAGTCCCATCAGCACTATaGCCTCTGCAAGTAAGACTA +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTVPSAL*PLQVRL
Trigger: TAGTCTTACTTGCAGAGGGCATAGTGCTGATGGGAC...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATCATAGCGAGCTAATATaGGCGACAACAATTTGCAGT +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNHSELI*ATTICS
Trigger: ACTGCAAATTGTTGTCGCCCATATTAGCTCGCTATG...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACACGCACAGATGTGCCATaGCACCAATTACAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTRTDVP*HQLQAV
Trigger: AACAGCTTGTAATTGGTGCCATGGCACATCTGTGCG...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATCTTTGTGAGGATACCTaGCCTACTTCTCAAAAACCA +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNLCEDT*PTSQKP
Trigger: TGGTTTTTGAGAAGTAGGCCAGGTATCCTCACAAAG...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACACCACATGCACTGGAATaGGACATTCCTGGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTPHALE*DIPGFY
Trigger: ATAAAAGCCAGGAATGTCTCATTCCAGTGCATGTGG...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAACTCAGCAGCATCAATaGAGTCATGGAACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTTQQHQ*SHGTEL
Trigger: AAGCTCTGTTCCATGACTTCATTGATGCTGCTGAGT...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACACCAACTCTTTGGGCGTaGGCACCATCTATATTTACA +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTPTLWA*APSIFT
Trigger: TGTAAATATAGATGGTGCTCACGCCCAAAGAGTTGG...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAGTCATCTCAGCATCTTaGCTATCCATCTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTVISAS*LSISSS
Trigger: GCTTGAAGAGATGGATAGTCAAGATGCTGAGATGAC...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATAAATCAGGTTGTTCTTaGCCAAGCCAGGAATCAAAA +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNKSGCS*PSQESK
Trigger: TTTTGATTCCTGGCTTGGTCAAGAACAACCTGATTT...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAAGAGAAGAATATGGGTTaGAATGTACACTTCAGGATA +
Preference number: 4 (lower is better)
Translates to: GNILIEHTQLAVAQTATQEKNMG*NVHFRI
Trigger: TATCCTGAAGTGTACATTTCAACCCATATTCTTCTC...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTATCTTTAACTAGTTCCTaGGTAACCATTCTCATGGAG +
Preference number: 4 (lower is better)
Translates to: PCEDLSHLMATELYHITLSLTSS*VTILME
Trigger: CTCCATGAGAATGGTTACTCAGGAACTAGTTAAAGA...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATTCCAATAAAAATATCTaGAACAGAGTGAAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNSNKNI*NRVKRE
Trigger: CTCCCGCTTCACTCTGTTTCAGATATTTTTATTGGA...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAATAATGTGTGCCCTGTaGGGATTTATCCCACTTAAT +
Preference number: 4 (lower is better)
Translates to: PCEDLSHLMATELYHITLIMCAL*GFIPLN
Trigger: ATTAAGTGGGATAAATCCTCACAGGGCACACATTAT...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACACCCACAGTGTTAACATaGTCTGGTTCTATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTPTVLT*SGSMRK
Trigger: CTTCCTCATAGAACCAGAGCATGTTAACACTGTGGG...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACAATTCACCTGGAAAGTaGTTGGTAACAAGTTTCATT +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHNSPGK*LVTSFI
Trigger: AATGAAACTTGTTACCAAGCACTTTCCAGGTGAATT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACATAAACACTTTATGCTaGCACTATATTGACCAGTTG +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHINTLC*HYIDQL
Trigger: CAACTGGTCAATATAGTGGCAGCATAAAGTGTTTAT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACGAAATAAACACTTTATaGTGCCACTATATTGACCAG +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHEINTL*CHYIDQ
Trigger: CTGGTCAATATAGTGGCAGCATAAAGTGTTTATTTC...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACGAACAGAGAAGAATATaGGTTGAAATGTACACTTCA +
Preference number: 4 (lower is better)
Translates to: LGSSILKAMANHTLAIMHEQRRI*VEMYTS
Trigger: TGAAGTGTACATTTCAACCCATATTCTTCTCTGTTC...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACATTTTTAATAAGGTCCTaGGGCACACCCCATGCTTTA +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTFLIRS*GTPHAL
Trigger: TAAAGCATGGGGTGTGCCTCAGGACCTTATTAAAAA...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR TCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACACTGTCCATTGAAGCCTaGATAGAAGAAACCATTTCC +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTLSIEA*IEETIS
Trigger: GGAAATGGTTTCTTCTATTCAGGCTTCAATGGACAG...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATTGTTTAGTGAAGCACTaGAAACAGAATTGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNCLVKH*KQNCRN
Trigger: ATTCCTGCAATTCTGTTTGCAGTGCTTCACTAAACA...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATTTATTAAGTCAGAATTaGAGTTGCTGGGGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNLLSQN*SCWGLK
Trigger: TTTCAGACCCCAGCAACTGCAATTCTGACTTAATAA...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAGACGATGTAGCACATTaGCAAGACCAAATATGTGGA +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTDDVAH*QDQICG
Trigger: TCCACATATTTGGTCTTGCCAATGTGCTACATCGTC...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAATCTTCAACACTACCTaGACTTTAGGTCATCAACTT +
Preference number: 4 (lower is better)
Translates to: PCEDLSHLMATELYHITLIFNTT*TLGHQL
Trigger: AAGTTGATGACCTAAAGTCCAGGTAGTGTTGAAGAT...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTACAAACTAAAAATCACTaGAAGACACAGAGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: PCEDLSHLMATELYHITLQTKNH*KTQSQY
Trigger: ATACTGGCTCTGTGTCTTCCAGTGATTTTTAGTTTG...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATTTTTCTACCACACTTTaGAATCAACTTTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNFSTTL*NQLFCK
Trigger: CTTGCAGAAAAGTTGATTGCAAAGTGTGGTAGAAAA...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATTTACAAACACAGTTCTaGATCTGTTACATGTGCAAA +
Preference number: 4 (lower is better)
Translates to: QIYLRCLACTPRCGYITNLQTQF*ICYMCK
Trigger: TTTGCACATGTAACAGATGCAGAACTGTGTTTGTAA...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAATTTGCAGTGATAGTTaGAAAGGCCCATCACCTTTA +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTICSDS*KGPSPL
Trigger: TAAAGGTGATGGGCCTTTCCAACTATCACTGCAAAT...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAACTAATCAAGTTACGTaGCCCAGCCAACAAATATTA +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTTNQVT*PSQQIL
Trigger: TAATATTTGTTGGCTGGGCCACGTAACTTGATTAGT...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR GCA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAAGTAAGTATTTATCTTaGAAACTTCTGTCACCTCCA +
Preference number: 4 (lower is better)
Translates to: CEDLSHLMATELYHITLTSKYLS*KLLSPP
Trigger: TGGAGGTGACAGAAGTTTGCAAGATAAATACTTACT...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 90 bp CGACGCCAAGGACGACGGAGTCTGTGGAGCCTCAGGGGGAGGAGGTaGCGGCGGCAACGGAGGCGGCGGCGGCGGCGGCTGAGACATAGC +
Preference number: 5 (lower is better)
Translates to: RRQGRRSLWSLRGRR*RRQRRRRRRRLRHS
Trigger: GCTATGTCTCAGCCGCCGCCGCCGCCGCCTCCGTTGCCGCCGCCACCTCCTCCCCCTGAGGCTCCACAGACTCCGTCGTCCTTGGCGTCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 90 bp CGGCGGCAACGGAGGCGGCGGCGGCGGCGGCTGAGACATAGCTCCTaGCTCTCGTGTCTCGCTCCGCGTCCCAGGCGACCCTCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: RRQRRRRRRRLRHSS*LSCLAPRPRRPSKA
Trigger: AGCTTTTGAGGGTCGCCTGGGACGCGGAGCGAGACACGAGAGCCAGGAGCTATGTCTCAGCCGCCGCCGCCGCCGCCTCCGTTGCCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 90 bp TCGGTCACCTCCTCAACCCCCAGCAGCTGTTGCTGCTCGTGCCGCTaGCCGCACTCGGTACACTCGATGCTGACAGAACCGGAGGCCGGG +
Preference number: 5 (lower is better)
Translates to: SVTSSTPSSCCCSCR*PHSVHSMLTEPEAG
Trigger: CCCGGCCTCCGGTTCTGTCAGCATCGAGTGTACCGAGTGCGGCCAGCGGCACGAGCAGCAACAGCTGCTGGGGGTTGAGGAGGTGACCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS GCA 90 bp AGCACTACGTCCGGGTCGGTCACCTCCTCAACCCCCAGCAGCTGTTaGTGCTCGTGCCGCTGGCCGCACTCGGTACACTCGATGCTGACA +
Preference number: 5 (lower is better)
Translates to: STTSGSVTSSTPSSC*CSCRWPHSVHSMLT
Trigger: TGTCAGCATCGAGTGTACCGAGTGCGGCCAGCGGCACGAGCAGCAACAGCTGCTGGGGGTTGAGGAGGTGACCGACCCGGACGTAGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS GCA 90 bp ACTACGTCCGGGTCGGTCACCTCCTCAACCCCCAGCAGCTGTTGCTaGTCGTGCCGCTGGCCGCACTCGGTACACTCGATGCTGACAGAA +
Preference number: 5 (lower is better)
Translates to: TTSGSVTSSTPSSCC*SCRWPHSVHSMLTE
Trigger: TTCTGTCAGCATCGAGTGTACCGAGTGCGGCCAGCGGCACGAGCAGCAACAGCTGCTGGGGGTTGAGGAGGTGACCGACCCGGACGTAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 90 bp GCTGTTGCTGCTCGTGCCGCTGGCCGCACTCGGTACACTCGATGCTaGCAGAACCGGAGGCCGGGAAAAATAGACGCGCCTGACACTTCG +
Preference number: 5 (lower is better)
Translates to: AVAARAAGRTRYTRC*QNRRPGKIDAPDTS
Trigger: CGAAGTGTCAGGCGCGTCTATTTTTCCCGGCCTCCGGTTCTGTCAGCATCGAGTGTACCGAGTGCGGCCAGCGGCACGAGCAGCAACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS GCA 90 bp CGCCGGACGTTGTTTCTCTTCTTACTTCTCCACTGCCGTAGCCGTTaGCCCGAACGTAACGGCCACCACCCCACCCCGCACTCACACTCA +
Preference number: 5 (lower is better)
Translates to: RRTLFLFLLLHCRSR*PERNGHHPTPHSHS
Trigger: TGAGTGTGAGTGCGGGGTGGGGTGGTGGCCGTTACGTTCGGGGCAACGGCTACGGCAGTGGAGAAGTAAGAAGAGAAACAACGTCCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 90 bp AGGAAGGCGCGGTCACCCAGTAAGGCGCAATCGAACAGTTCGCCCTaGTTCATGTCCCGGAGAAGCTTGGCCCGGCCTGTCTGTTTGTCC +
Preference number: 5 (lower is better)
Translates to: RKARSPSKAQSNSSP*FMSRRSLARPVCLS
Trigger: GGACAAACAGACAGGCCGGGCCAAGCTTCTCCGGGACATGAACCAGGGCGAACTGTTCGATTGCGCCTTACTGGGTGACCGCGCCTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 90 bp CACTCGATGCTGACAGAACCGGAGGCCGGGAAAAATAGACGCGCCTaGCACTTCGGATCCGGGCAGCTCCCGGAAAGGATTCTCCGGTCT +
Preference number: 5 (lower is better)
Translates to: HSMLTEPEAGKNRRA*HFGSGQLPERILRS
Trigger: AGACCGGAGAATCCTTTCCGGGAGCTGCCCGGATCCGAAGTGTCAGGCGCGTCTATTTTTCCCGGCCTCCGGTTCTGTCAGCATCGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS GCA 90 bp GCATGCCAGAAGAGCTCTCGGCCTACTAGAGCCCGAGACACAGCATaGACCAAGCAGTGTCCATCCCCGTCCACATGCACTGGAATGAGA +
Preference number: 5 (lower is better)
Translates to: ACQKSSRPTRARDTA*TKQCPSPSTCTGMR
Trigger: TCTCATTCCAGTGCATGTGGACGGGGATGGACACTGCTTGGTGCATGCTGTGTCTCGGGCTCTAGTAGGCCGAGAGCTCTTCTGGCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 90 bp AGGCGCAATCGAACAGTTCGCCCTGGTTCATGTCCCGGAGAAGCTTaGCCCGGCCTGTCTGTTTGTCCATTCCATAGCGAGCTAATATGG +
Preference number: 5 (lower is better)
Translates to: RRNRTVRPGSCPGEA*PGLSVCPFHSELIW
Trigger: CCATATTAGCTCGCTATGGAATGGACAAACAGACAGGCCGGGCCAAGCTTCTCCGGGACATGAACCAGGGCGAACTGTTCGATTGCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS GCA 90 bp GCCCGAGACACAGCATGCACCAAGCAGTGTCCATCCCCGTCCACATaGACTGGAATGAGACATTCCTGGCTTTTATTGGCCCGCTTAATG +
Preference number: 5 (lower is better)
Translates to: ARDTACTKQCPSPST*TGMRHSWLLLARLM
Trigger: CATTAAGCGGGCCAATAAAAGCCAGGAATGTCTCATTCCAGTGCATGTGGACGGGGATGGACACTGCTTGGTGCATGCTGTGTCTCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 90 bp AGACACAGCATGCACCAAGCAGTGTCCATCCCCGTCCACATGCACTaGAATGAGACATTCCTGGCTTTTATTGGCCCGCTTAATGTCCTC +
Preference number: 5 (lower is better)
Translates to: RHSMHQAVSIPVHMH*NETFLAFIGPLNVL
Trigger: GAGGACATTAAGCGGGCCAATAAAAGCCAGGAATGTCTCATTCCAGTGCATGTGGACGGGGATGGACACTGCTTGGTGCATGCTGTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 90 bp GCTTGGCCCGGCCTGTCTGTTTGTCCATTCCATAGCGAGCTAATATaGGCGACAACAATTTGCAGTGATAGTTGGAAAGGCCCATCACCT +
Preference number: 5 (lower is better)
Translates to: AWPGLSVCPFHSELI*ATTICSDSWKGPSP
Trigger: AGGTGATGGGCCTTTCCAACTATCACTGCAAATTGTTGTCGCCCATATTAGCTCGCTATGGAATGGACAAACAGACAGGCCGGGCCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 90 bp AAGCAGTGTCCATCCCCGTCCACATGCACTGGAATGAGACATTCCTaGCTTTTATTGGCCCGCTTAATGTCCTCCAGAGTGTCATGCAAA +
Preference number: 5 (lower is better)
Translates to: KQCPSPSTCTGMRHS*LLLARLMSSRVSCK
Trigger: TTTGCATGACACTCTGGAGGACATTAAGCGGGCCAATAAAAGCCAGGAATGTCTCATTCCAGTGCATGTGGACGGGGATGGACACTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAGCGTTCCGCAGCAGGTaGTGTAGCACTACGTCCGGG +
Preference number: 5 (lower is better)
Translates to: PCEDLSHLMATELYHITLAFRSR*CSTTSG
Trigger: CCCGGACGTAGTGCTACACAACCTGCTGCGGAACGC...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAAAGTTCCGTGTTCTTCTaGGGTGCCCCCGTAACCCCG +
Preference number: 5 (lower is better)
Translates to: GNILIEHTQLAVAQTATQSSVFF*GAPVTP
Trigger: CGGGGTTACGGGGGCACCCAAGAAGAACACGGAACT...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAAATGTCCCGGAGAAGCTaGGCCCGGCCTGTCTGTTTG +
Preference number: 5 (lower is better)
Translates to: GNILIEHTQLAVAQTATQMSRRS*ARPVCL
Trigger: CAAACAGACAGGCCGGGCCAAGCTTCTCCGGGACAT...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 90 bp ACCAAATATGTGGATATTCCTCAGGCCCAAGGGAACACCCTCAGGTaGTACAAACAGAGGGTCACACTCATTGATAATGTCCTCCCACTC +
Preference number: 5 (lower is better)
Translates to: TKYVDIPQAQGNTLR*YKQRVTLIDNVLPL
Trigger: GAGTGGGAGGACATTATCAATGAGTGTGACCCTCTGTTTGTACCACCTGAGGGTGTTCCCTTGGGCCTGAGGAATATCCACATATTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 90 bp GTTTGTTCAAATGACCATCTTTCCCAGTGCACTTCTCTGCAGGGATaGGCCCAGGTAGAAAGGTGGCTGAATAATCACCAGAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: VCSNDHLSQCTSLQG*AQVERWLNNHQSFS
Trigger: TGAGAAGCTCTGGTGATTATTCAGCCACCTTTCTACCTGGGCTCATCCCTGCAGAGAAGTGCACTGGGAAAGATGGTCATTTGAACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 90 bp ATCATTAGTTGTGATTCGGATCTTCTTCTCCTTAGAAGTTGTCGGTaGATAGGGAGCCTTGGTAGGTGTAGCAGGTGCAGAGGATGGACC +
Preference number: 5 (lower is better)
Translates to: IISCDSDLLLLRSCR*IGSLGRCSRCRGWT
Trigger: GGTCCATCCTCTGCACCTGCTACACCTACCAAGGCTCCCTATTCACCGACAACTTCTAAGGAGAAGAAGATCCGAATCACAACTAATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACGCCTGCCGTCTCTCATaGTTACTACTCCAGGAGCTA +
Preference number: 5 (lower is better)
Translates to: LGSSILKAMANHTLAIMHACRLS*LLLQEL
Trigger: TAGCTCCTGGAGTAGTAACAATGAGAGACGGCAGGC...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACCCTGAGATGTCTAGCTaGCACGCCAAGATGTGGCTA +
Preference number: 5 (lower is better)
Translates to: LGSSILKAMANHTLAIMHPEMSS*HAKMWL
Trigger: TAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGG...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAAGCTCCAAGACTTGCCTaGGGTCACAGAGCACACTGT +
Preference number: 5 (lower is better)
Translates to: GNILIEHTQLAVAQTATQAPRLA*GHRAHC
Trigger: ACAGTGTGCTCTGTGACCCAAGGCAAGTCTTGGAGC...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAAGAAAGGCTCCAAGACTaGCCTTGGGTCACAGAGCAC +
Preference number: 5 (lower is better)
Translates to: GNILIEHTQLAVAQTATQERLQD*PWVTEH
Trigger: GTGCTCTGTGACCCAAGGCAAGTCTTGGAGCCTTTC...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 90 bp TTCCATAGCGAGCTAATATGGGCGACAACAATTTGCAGTGATAGTTaGAAAGGCCCATCACCTTTACCAGTTCCGTGTTCTTCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: FHSELIWATTICSDS*KGPSPLPVPCSSWV
Trigger: CACCCAAGAAGAACACGGAACTGGTAAAGGTGATGGGCCTTTCCAACTATCACTGCAAATTGTTGTCGCCCATATTAGCTCGCTATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 90 bp GGGGATATAATGGTTTCTACCGGAGCTGCTCCATGCAATACAGATTaGTTTGTTCAAATGACCATCTTTCCCAGTGCACTTCTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GDIMVSTGAAPCNTD*FVQMTIFPSALLCR
Trigger: CCTGCAGAGAAGTGCACTGGGAAAGATGGTCATTTGAACAAACCAATCTGTATTGCATGGAGCAGCTCCGGTAGAAACCATTATATCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACTTTGTGCTTTTGACCTaGTGGCAAAGGCTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: LGSSILKAMANHTLAIMHFVLLT*WQRLLP
Trigger: TGGGAGCAGCCTTTGCCACAAGGTCAAAAGCACAAA...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACTTCCCCTTTGTGCTTTaGACCTTGTGGCAAAGGCTG +
Preference number: 5 (lower is better)
Translates to: LGSSILKAMANHTLAIMHFPFVL*TLWQRL
Trigger: CAGCCTTTGCCACAAGGTCAAAAGCACAAAGGGGAA...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACATAGAGCACACACAATaGGCTGTGGCTCAGACAGCA +
Preference number: 5 (lower is better)
Translates to: LGSSILKAMANHTLAIMHIEHTQ*AVAQTA
Trigger: TGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTAT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACATGTCTAAAGAAATTTaGCTGGCAGGGTGCGGTGGC +
Preference number: 5 (lower is better)
Translates to: LGSSILKAMANHTLAIMHMSKEI*LAGCGG
Trigger: GCCACCGCACCCTGCCAGCAAAATTTCTTTAGACAT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS GCA 90 bp TCTGTTTGTCCATTCCATAGCGAGCTAATATGGGCGACAACAATTTaGAGTGATAGTTGGAAAGGCCCATCACCTTTACCAGTTCCGTGT +
Preference number: 5 (lower is better)
Translates to: SVCPFHSELIWATTI*SDSWKGPSPLPVPC
Trigger: ACACGGAACTGGTAAAGGTGATGGGCCTTTCCAACTATCACTGCAAATTGTTGTCGCCCATATTAGCTCGCTATGGAATGGACAAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS GCA 90 bp AAAGCTGTAATTTTTGTCAGTCCTCAGCTGTCCATGAGTACTTTTTaGCAGGTTATACAATTTCCCTCCAGGAGCCAACCACTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: KAVIFVSPQLSMSTF*QVIQFPSRSQPLWR
Trigger: CCTCCAGAGTGGTTGGCTCCTGGAGGGAAATTGTATAACCTGGCAAAAAGTACTCATGGACAGCTGAGGACTGACAAAAATTACAGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 90 bp ACTTTTTGCCAGGTTATACAATTTCCCTCCAGGAGCCAACCACTCTaGAGGAACATGAAGTTCAGAAAGGGCACCACAGAGCAAACATTT +
Preference number: 5 (lower is better)
Translates to: TFCQVIQFPSRSQPL*RNMKFRKGTTEQTF
Trigger: AAATGTTTGCTCTGTGGTGCCCTTTCTGAACTTCATGTTCCTCCAGAGTGGTTGGCTCCTGGAGGGAAATTGTATAACCTGGCAAAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATCGGAAGCGCCGGACGTaGTTTCTCTTCTTACTTCTC +
Preference number: 5 (lower is better)
Translates to: QIYLRCLACTPRCGYITNRKRRT*FLFLLL
Trigger: GAGAAGTAAGAAGAGAAACAACGTCCGGCGCTTCCG...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACGGACGATGTAGCACATaGGCAAGACCAAATATGTGG +
Preference number: 5 (lower is better)
Translates to: LGSSILKAMANHTLAIMHGRCST*ARPNMW
Trigger: CCACATATTTGGTCTTGCCAATGTGCTACATCGTCC...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACAGAGACAGCCAGGCTTaGAATGCTCTAGGTAAGAGA +
Preference number: 5 (lower is better)
Translates to: LGSSILKAMANHTLAIMHRDSQA*NALGKR
Trigger: TCTCTTACCTAGAGCATTCAAAGCCTGGCTGTCTCT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 90 bp GAGGGACTTGATTCCCTACTTCTTGTAGTAGCCTCTGCTCGAACCTaGCTTACAGCCTCTTTAACTAAATCTTCAACATCAGGACCAATG +
Preference number: 5 (lower is better)
Translates to: EGLDSLLLVVASART*LTASLTKSSTSGPM
Trigger: CATTGGTCCTGATGTTGAAGATTTAGTTAAAGAGGCTGTAAGTCAGGTTCGAGCAGAGGCTACTACAAGAAGTAGGGAATCAAGTCCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATCATTCCTGGCTTTTATaGGCCCGCTTAATGTCCTCC +
Preference number: 5 (lower is better)
Translates to: QIYLRCLACTPRCGYITNHSWLL*ARLMSS
Trigger: GGAGGACATTAAGCGGGCCAATAAAAGCCAGGAATG...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAGTCATGGAACAGAGCTaGATATCGGGCCAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: CEDLSHLMATELYHITLTVMEQS*ISGQVL
Trigger: CAGCACCTGGCCCGATATCAAGCTCTGTTCCATGAC...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAAGGAAAAGTACAATGCTaGCCATCAGCCATACCCATG +
Preference number: 5 (lower is better)
Translates to: GNILIEHTQLAVAQTATQGKVQC*PSAIPM
Trigger: CATGGGTATGGCTGATGGCAAGCATTGTACTTTTCC...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACGAAGACTCCCAGACTTaGCAGAAGAACTCACAACTT +
Preference number: 5 (lower is better)
Translates to: LGSSILKAMANHTLAIMHEDSQT*QKNSQL
Trigger: AAGTTGTGAGTTCTTCTGCAAAGTCTGGGAGTCTTC...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATGCAACCTTTTCAGTCTaGCATTGCTCTACCACAGGC +
Preference number: 5 (lower is better)
Translates to: QIYLRCLACTPRCGYITNATFSV*HCSTTG
Trigger: GCCTGTGGTAGAGCAATGCAAGACTGAAAAGGTTGC...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATGAGCACACTGTCGGTTaGAGATTCTCAGTGTTGCAC +
Preference number: 5 (lower is better)
Translates to: QIYLRCLACTPRCGYITNEHTVG*RFSVLH
Trigger: GTGCAACACTGAGAATCTCAAACCGACAGTGTGCTC...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAAGAAGAAATTGAGGCCTaGAAAGGCTCCAAGACTTGC +
Preference number: 5 (lower is better)
Translates to: GNILIEHTQLAVAQTATQEEIEA*KGSKTC
Trigger: GCAAGTCTTGGAGCCTTTCAAGGCCTCAATTTCTTC...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAAAGTCAGAATTGCAGTaGCTGGGGTCTGAAAGAGCC +
Preference number: 5 (lower is better)
Translates to: PCEDLSHLMATELYHITLKSELQ*LGSERA
Trigger: GGCTCTTTCAGACCCCAGCAACTGCAATTCTGACTT...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 90 bp TGTTTTCTGTCCAGTAAGAATAATTTTAGTTGGGAGCTGAGACTCTaGTTCTTGTCCTTGAACATCTCCAACTCTTTGGGCGTGAGCACC +
Preference number: 5 (lower is better)
Translates to: CFLSSKNNFSWELRL*FLSLNISNSLGVST
Trigger: GGTGCTCACGCCCAAAGAGTTGGAGATGTTCAAGGACAAGAATCAGAGTCTCAGCTCCCAACTAAAATTATTCTTACTGGACAGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAAGAGGGTCACACTCATaGATAATGTCCTCCCACTCA +
Preference number: 5 (lower is better)
Translates to: PCEDLSHLMATELYHITLRGSHS*IMSSHS
Trigger: TGAGTGGGAGGACATTATCAATGAGTGTGACCCTCT...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp GGTAACATATTAATAGAGCACACACAATTGGCTGTGGCTCAGACAGCAACACAAAAATTCATAGGCAGTTaGGGCAAAGCAGCCCCTTTT +
Preference number: 5 (lower is better)
Translates to: GNILIEHTQLAVAQTATQKFIGS*GKAAPF
Trigger: AAAAGGGGCTGCTTTGCCCAAACTGCCTATGAATTT...TTGTGTTGCTGTCTGAGCCACAGCCAATTGTGTGTGCTCTATTAATATGTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAAATCCACAACCACATTaGCCACCAGTGGACCTAGAA +
Preference number: 5 (lower is better)
Translates to: PCEDLSHLMATELYHITLNPQPH*PPVDLE
Trigger: TTCTAGGTCCACTGGTGGCAAATGTGGTTGTGGATT...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACTGTGAGGAAGTCCCTTaGCATAAGACCATACATCTT +
Preference number: 5 (lower is better)
Translates to: LGSSILKAMANHTLAIMHCEEVP*HKTIHL
Trigger: AAGATGTATGGTCTTATGCAAAGGGACTTCCTCACA...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 90 bp GGAACTATTACTAAAGTCTGTCCCTGTATTATGCTTTCTTACAACTaGAGTTTCCCTAGCTCTTGGATCAAGGTGTGGGTTACCAGATGC +
Preference number: 5 (lower is better)
Translates to: GTITKVCPCIMLSYN*SFPSSWIKVWVTRC
Trigger: GCATCTGGTAACCCACACCTTGATCCAAGAGCTAGGGAAACTTCAGTTGTAAGAAAGCATAATACAGGGACAGACTTTAGTAATAGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATCCATCCCAAAAGTGTTaGAATCCACAACCACATTTG +
Preference number: 5 (lower is better)
Translates to: QIYLRCLACTPRCGYITNPSQKC*NPQPHL
Trigger: CAAATGTGGTTGTGGATTCAAACACTTTTGGGATGG...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAAAAGCTTCTGGTAGATaGTCATACTCCTTACCATCC +
Preference number: 5 (lower is better)
Translates to: PCEDLSHLMATELYHITLKASGR*SYSLPS
Trigger: GGATGGTAAGGAGTATGACAATCTACCAGAAGCTTT...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATTCACCTGGAAAGTGCTaGGTAACAAGTTTCATTGCA +
Preference number: 5 (lower is better)
Translates to: QIYLRCLACTPRCGYITNSPGKC*VTSFIA
Trigger: TGCAATGAAACTTGTTACCAAGCACTTTCCAGGTGA...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAAACATCTCCAACTCTTaGGGCGTGAGCACCATCTAT +
Preference number: 5 (lower is better)
Translates to: CEDLSHLMATELYHITLTNISNS*GVSTIY
Trigger: ATAGATGGTGCTCACGCCCAAAGAGTTGGAGATGTT...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAAGAAACAGTCCTGGGTaGCCCTTTTTGTTCTTGTTT +
Preference number: 5 (lower is better)
Translates to: PCEDLSHLMATELYHITLRNSPG*PFLFLF
Trigger: AAACAAGAACAAAAAGGGCAACCCAGGACTGTTTCT...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATAGTCATCTCAGCATCTaGACTATCCATCTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: QIYLRCLACTPRCGYITNSHLSI*TIHLFK
Trigger: CTTGAAGAGATGGATAGTCAAGATGCTGAGATGACT...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACACTGGCACTGAAGATTaGATGAATACACTAAGCAAA +
Preference number: 5 (lower is better)
Translates to: LGSSILKAMANHTLAIMHTGTED*MNTLSK
Trigger: TTTGCTTAGTGTATTCATCAAATCTTCAGTGCCAGT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CTGGGCAGCAGTATATTAAAAGCTATGGCCAATCACACACTTGCTATCATGCACAGAGAAGAATATGGGTaGAAATGTACACTTCAGGAT +
Preference number: 5 (lower is better)
Translates to: LGSSILKAMANHTLAIMHREEYG*KCTLQD
Trigger: ATCCTGAAGTGTACATTTCAACCCATATTCTTCTCT...GTGCATGATAGCAAGTGTGTGATTGGCCATAGCTTTTAATATACTGCTGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTACTTTTCAGTCTTGCATaGCTCTACCACAGGCATAAT +
Preference number: 5 (lower is better)
Translates to: PCEDLSHLMATELYHITLLFSLA*LYHRHN
Trigger: ATTATGCCTGTGGTAGAGCAATGCAAGACTGAAAAG...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAGCACTGCAAACAGAATaGCAGGAATGCATTTTAGTT +
Preference number: 5 (lower is better)
Translates to: PCEDLSHLMATELYHITLALQTE*QECILV
Trigger: AACTAAAATGCATTCCTGCAATTCTGTTTGCAGTGC...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTATTGGAAGTAAACGTGTaGACTGCTAAGCTACACAAA +
Preference number: 5 (lower is better)
Translates to: PCEDLSHLMATELYHITLLEVNV*TAKLHK
Trigger: TTTGTGTAGCTTAGCAGTCAACACGTTTACTTCCAA...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CCCTGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAATTATTAAGTCAGAATaGCAGTTGCTGGGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: PCEDLSHLMATELYHITLIIKSE*QLLGSE
Trigger: TTCAGACCCCAGCAACTGCAATTCTGACTTAATAAT...TAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 90 bp CAAGGAGTACATTTCTTTTTCAGCTTGCTCCTGAAGTTCCTTAGATaGCAGTTTACCAGTAACAGCAATATCTTCTTGTTTCACAGTGTG +
Preference number: 5 (lower is better)
Translates to: QGVHFFFSLLLKFLR*QFTSNSNIFLFHSV
Trigger: CACACTGTGAAACAAGAAGATATTGCTGTTACTGGTAAACTGTCATCTAAGGAACTTCAGGAGCAAGCTGAAAAAGAAATGTACTCCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp CAAATTTACCTGAGATGTCTAGCTTGCACGCCAAGATGTGGCTATATCACAAATTCCATGCAATACAGATaGGTTTGTTCAAATGACCAT +
Preference number: 5 (lower is better)
Translates to: QIYLRCLACTPRCGYITNSMQYR*VCSNDH
Trigger: ATGGTCATTTGAACAAACCAATCTGTATTGCATGGA...ATTTGTGATATAGCCACATCTTGGCGTGCAAGCTAGACATCTCAGGTAAATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACACGGCAGAACAAAAGGTaGACAATTGTGAAACCACAA +
Preference number: 5 (lower is better)
Translates to: CEDLSHLMATELYHITLTRQNKR*TIVKPQ
Trigger: TTGTGGTTTCACAATTGTCAACCTTTTGTTCTGCCG...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 90 bp GTTTTCCGTTTCTGCATTACAGAAGCCTGTTCCGTAATATTCTGTTaGATAGTTCTTTCAGTTTTACTCATGTTTAACTCCTCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: VFRFCITEACSVIFC*IVLSVLLMFNSSLC
Trigger: GCACAAGGAGGAGTTAAACATGAGTAAAACTGAAAGAACTATTCAACAGAATATTACGGAACAGGCTTCTGTAATGCAGAAACGGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 90 bp GTTGCTAAAAGACACAAGGAGTACATTTCTTTTTCAGCTTGCTCCTaGAGTTCCTTAGATGACAGTTTACCAGTAACAGCAATATCTTCT +
Preference number: 5 (lower is better)
Translates to: VAKRHKEYISFSACS*SSLDDSLPVTAISS
Trigger: AGAAGATATTGCTGTTACTGGTAAACTGTCATCTAAGGAACTTCAGGAGCAAGCTGAAAAAGAAATGTACTCCTTGTGTCTTTTAGCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAGTCCATGAGTACTTTTaGCCAGGTTATACAATTTCC +
Preference number: 5 (lower is better)
Translates to: CEDLSHLMATELYHITLTVHEYF*PGYTIS
Trigger: GGAAATTGTATAACCTGGCAAAAAGTACTCATGGAC...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACACATTTCTTTTTCAGCTaGCTCCTGAAGTTCCTTAGA +
Preference number: 5 (lower is better)
Translates to: CEDLSHLMATELYHITLTHFFFS*LLKFLR
Trigger: TCTAAGGAACTTCAGGAGCAAGCTGAAAAAGAAATG...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAAAAATCAGGTTGTTCTaGACCAAGCCAGGAATCAAA +
Preference number: 5 (lower is better)
Translates to: CEDLSHLMATELYHITLTKIRLF*TKPGIK
Trigger: TTTGATTCCTGGCTTGGTCAAGAACAACCTGATTTT...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACAGATGGAAACCTTGCTTaGAGAACCATAAAACTCAAA +
Preference number: 5 (lower is better)
Translates to: CEDLSHLMATELYHITLTDGNLA*RTIKLK
Trigger: TTTGAGTTTTATGGTTCTCAAAGCAAGGTTTCCATC...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS-3UTR CAA 90 bp TGTGAGGATTTATCCCACTTAATGGCAACTGAACTCTACCACATTACATTAACATTGAGATTCTCAGTGTaGCACATGGTCATAAATGTT +
Preference number: 5 (lower is better)
Translates to: CEDLSHLMATELYHITLTLRFSV*HMVINV
Trigger: AACATTTATGACCATGTGCAACACTGAGAATCTCAA...TGTTAATGTAATGTGGTAGAGTTCAGTTGCCATTAAGTGGGATAAATCCTCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 72 bp GGACGACGGAGTCTGTGGAGCCTCAGGGGGAGGAGGTaGCGGCGGCAACGGAGGCGGCGGCGGCGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: GRRSLWSLRGRR*RRQRRRRRRRL
Trigger: CAGCCGCCGCCGCCGCCGCCTCCGTTGCCGCCGCCACCTCCTCCCCCTGAGGCTCCACAGACTCCGTCGTCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 72 bp GGTGGCGGCGGCAACGGAGGCGGCGGCGGCGGCGGCTaGGACATAGCTCCTGGCTCTCGTGTCTCGCTCCGC +
Preference number: 6 (lower is better)
Translates to: GGGGNGGGGGGG*DIAPGSRVSLR
Trigger: GCGGAGCGAGACACGAGAGCCAGGAGCTATGTCTCAGCCGCCGCCGCCGCCGCCTCCGTTGCCGCCGCCACC
75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 72 bp CGGAGGCGGCGGCGGCGGCGGCTGAGACATAGCTCCTaGCTCTCGTGTCTCGCTCCGCGTCCCAGGCGACCC +
Preference number: 6 (lower is better)
Translates to: RRRRRRRLRHSS*LSCLAPRPRRP
Trigger: GGGTCGCCTGGGACGCGGAGCGAGACACGAGAGCCAGGAGCTATGTCTCAGCCGCCGCCGCCGCCGCCTCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 72 bp CGAAGCAGCCGCCGACGCCAAGGACGACGGAGTCTGTaGAGCCTCAGGGGGAGGAGGTGGCGGCGGCAACGG +
Preference number: 6 (lower is better)
Translates to: RSSRRRQGRRSL*SLRGRRWRRQR
Trigger: CCGTTGCCGCCGCCACCTCCTCCCCCTGAGGCTCCACAGACTCCGTCGTCCTTGGCGTCGGCGGCTGCTTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 72 bp GTCCGGGTCGGTCACCTCCTCAACCCCCAGCAGCTGTaGCTGCTCGTGCCGCTGGCCGCACTCGGTACACTC +
Preference number: 6 (lower is better)
Translates to: VRVGHLLNPQQL*LLVPLAALGTL
Trigger: GAGTGTACCGAGTGCGGCCAGCGGCACGAGCAGCAACAGCTGCTGGGGGTTGAGGAGGTGACCGACCCGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS GCA 72 bp GGGTCGGTCACCTCCTCAACCCCCAGCAGCTGTTGCTaGTCGTGCCGCTGGCCGCACTCGGTACACTCGATG +
Preference number: 6 (lower is better)
Translates to: GSVTSSTPSSCC*SCRWPHSVHSM
Trigger: CATCGAGTGTACCGAGTGCGGCCAGCGGCACGAGCAGCAACAGCTGCTGGGGGTTGAGGAGGTGACCGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 72 bp GCCCCCGTAACCCCGAGCAGCGCGTTCCGCAGCAGGTaGTGTAGCACTACGTCCGGGTCGGTCACCTCCTCA +
Preference number: 6 (lower is better)
Translates to: APVTPSSAFRSR*CSTTSGSVTSS
Trigger: TGAGGAGGTGACCGACCCGGACGTAGTGCTACACAACCTGCTGCGGAACGCGCTGCTCGGGGTTACGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 72 bp GCTCGTGCCGCTGGCCGCACTCGGTACACTCGATGCTaGCAGAACCGGAGGCCGGGAAAAATAGACGCGCCT +
Preference number: 6 (lower is better)
Translates to: ARAAGRTRYTRC*QNRRPGKIDAP
Trigger: AGGCGCGTCTATTTTTCCCGGCCTCCGGTTCTGTCAGCATCGAGTGTACCGAGTGCGGCCAGCGGCACGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS GCA 72 bp GCCCATCACCTTTACCAGTTCCGTGTTCTTCTTGGGTaGCCCCGTAACCCCGAGCAGCGCGTTCCGCAGCAG +
Preference number: 6 (lower is better)
Translates to: AHHLYQFRVLLG*PRNPEQRVPQQ
Trigger: CTGCTGCGGAACGCGCTGCTCGGGGTTACGGGGGCACCCAAGAAGAACACGGAACTGGTAAAGGTGATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 72 bp CGGTCACCCAGTAAGGCGCAATCGAACAGTTCGCCCTaGTTCATGTCCCGGAGAAGCTTGGCCCGGCCTGTC +
Preference number: 6 (lower is better)
Translates to: RSPSKAQSNSSP*FMSRRSLARPV
Trigger: GACAGGCCGGGCCAAGCTTCTCCGGGACATGAACCAGGGCGAACTGTTCGATTGCGCCTTACTGGGTGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 72 bp GAAAGGCCCATCACCTTTACCAGTTCCGTGTTCTTCTaGGGTGCCCCCGTAACCCCGAGCAGCGCGTTCCGC +
Preference number: 6 (lower is better)
Translates to: ERPITFTSSVFF*GAPVTPSSAFR
Trigger: GCGGAACGCGCTGCTCGGGGTTACGGGGGCACCCAAGAAGAACACGGAACTGGTAAAGGTGATGGGCCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 72 bp CTGACAGAACCGGAGGCCGGGAAAAATAGACGCGCCTaGCACTTCGGATCCGGGCAGCTCCCGGAAAGGATT +
Preference number: 6 (lower is better)
Translates to: LTEPEAGKNRRA*HFGSGQLPERI
Trigger: AATCCTTTCCGGGAGCTGCCCGGATCCGAAGTGTCAGGCGCGTCTATTTTTCCCGGCCTCCGGTTCTGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS GCA 72 bp TTGTTTCTCTTCTTACTTCTCCACTGCCGTAGCCGTTaGCCCGAACGTAACGGCCACCACCCCACCCCGCAC +
Preference number: 6 (lower is better)
Translates to: LFLFLLLHCRSR*PERNGHHPTPH
Trigger: GTGCGGGGTGGGGTGGTGGCCGTTACGTTCGGGGCAACGGCTACGGCAGTGGAGAAGTAAGAAGAGAAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 90 bp CTACCAGCTCTTCCTCCTCCTAAGCGAAGGCGGAAGCGCCGGACGTaGTTTCTCTTCTTACTTCTCCACTGCCGTAGCCGTTGCCCCGAA +
Preference number: 6 (lower is better)
Translates to: LPALPPPKRRRKRRT*FLFLLLHCRSRCPE
Trigger: TTCGGGGCAACGGCTACGGCAGTGGAGAAGTAAGAAGAGAAACAACGTCCGGCGCTTCCGCCTTCGCTTAGGAGGAGGAAGAGCTGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS GCA 72 bp AAGCGCCGGACGTTGTTTCTCTTCTTACTTCTCCACTaGCGTAGCCGTTGCCCCGAACGTAACGGCCACCAC +
Preference number: 6 (lower is better)
Translates to: KRRTLFLFLLLH*RSRCPERNGHH
Trigger: GTGGTGGCCGTTACGTTCGGGGCAACGGCTACGGCAGTGGAGAAGTAAGAAGAGAAACAACGTCCGGCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS GCA 72 bp AAGAGCTCTCGGCCTACTAGAGCCCGAGACACAGCATaGACCAAGCAGTGTCCATCCCCGTCCACATGCACT +
Preference number: 6 (lower is better)
Translates to: KSSRPTRARDTA*TKQCPSPSTCT
Trigger: AGTGCATGTGGACGGGGATGGACACTGCTTGGTGCATGCTGTGTCTCGGGCTCTAGTAGGCCGAGAGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 72 bp CGAACAGTTCGCCCTGGTTCATGTCCCGGAGAAGCTTaGCCCGGCCTGTCTGTTTGTCCATTCCATAGCGAG +
Preference number: 6 (lower is better)
Translates to: RTVRPGSCPGEA*PGLSVCPFHSE
Trigger: CTCGCTATGGAATGGACAAACAGACAGGCCGGGCCAAGCTTCTCCGGGACATGAACCAGGGCGAACTGTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 72 bp CTTCCTCCTCCTAAGCGAAGGCGGAAGCGCCGGACGTaGTTTCTCTTCTTACTTCTCCACTGCCGTAGCCGT +
Preference number: 6 (lower is better)
Translates to: LPPPKRRRKRRT*FLFLLLHCRSR
Trigger: ACGGCTACGGCAGTGGAGAAGTAAGAAGAGAAACAACGTCCGGCGCTTCCGCCTTCGCTTAGGAGGAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 72 bp GCTCCTCCACGGAATTTCCCCTTTGTGCTTTTGACCTaGTGGCAAAGGCTGCTCCCAGTGCATCTGCTACAC +
Preference number: 6 (lower is better)
Translates to: APPRNFPFVLLT*WQRLLPVHLLH
Trigger: GTGTAGCAGATGCACTGGGAGCAGCCTTTGCCACAAGGTCAAAAGCACAAAGGGGAAATTCCGTGGAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 72 bp CCATCCCCGTCCACATGCACTGGAATGAGACATTCCTaGCTTTTATTGGCCCGCTTAATGTCCTCCAGAGTG +
Preference number: 6 (lower is better)
Translates to: PSPSTCTGMRHS*LLLARLMSSRV
Trigger: CACTCTGGAGGACATTAAGCGGGCCAATAAAAGCCAGGAATGTCTCATTCCAGTGCATGTGGACGGGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 72 bp ATGCACCAAGCAGTGTCCATCCCCGTCCACATGCACTaGAATGAGACATTCCTGGCTTTTATTGGCCCGCTT +
Preference number: 6 (lower is better)
Translates to: MHQAVSIPVHMH*NETFLAFIGPL
Trigger: AAGCGGGCCAATAAAAGCCAGGAATGTCTCATTCCAGTGCATGTGGACGGGGATGGACACTGCTTGGTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 72 bp ATAGGGAGCCTTGGTAGGTGTAGCAGGTGCAGAGGATaGACCATCACGAATGGTACTGGGAGAAACAGTCCT +
Preference number: 6 (lower is better)
Translates to: IGSLGRCSRCRG*TITNGTGRNSP
Trigger: AGGACTGTTTCTCCCAGTACCATTCGTGATGGTCCATCCTCTGCACCTGCTACACCTACCAAGGCTCCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 90 bp TCTCTTCAAGCTCCTCCACGGAATTTCCCCTTTGTGCTTTTGACCTaGTGGCAAAGGCTGCTCCCAGTGCATCTGCTACACAGCCATCAG +
Preference number: 6 (lower is better)
Translates to: SLQAPPRNFPFVLLT*WQRLLPVHLLHSHQ
Trigger: CTGATGGCTGTGTAGCAGATGCACTGGGAGCAGCCTTTGCCACAAGGTCAAAAGCACAAAGGGGAAATTCCGTGGAGGAGCTTGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 90 bp CCATCCCCGTCCACATGCACTGGAATGAGACATTCCTGGCTTTTATaGGCCCGCTTAATGTCCTCCAGAGTGTCATGCAAATACAGGAGG +
Preference number: 6 (lower is better)
Translates to: PSPSTCTGMRHSWLL*ARLMSSRVSCKYRR
Trigger: CCTCCTGTATTTGCATGACACTCTGGAGGACATTAAGCGGGCCAATAAAAGCCAGGAATGTCTCATTCCAGTGCATGTGGACGGGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 90 bp TATCCATCTCTTCAAGCTCCTCCACGGAATTTCCCCTTTGTGCTTTaGACCTTGTGGCAAAGGCTGCTCCCAGTGCATCTGCTACACAGC +
Preference number: 6 (lower is better)
Translates to: YPSLQAPPRNFPFVL*TLWQRLLPVHLLHS
Trigger: GCTGTGTAGCAGATGCACTGGGAGCAGCCTTTGCCACAAGGTCAAAAGCACAAAGGGGAAATTCCGTGGAGGAGCTTGAAGAGATGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS GCA 72 bp TTCGCTGGGCCTCAACCAAATCAGGATCAAGCTGCCTaGCGTCTCTCATTGTTACTACTCCAGGAGCTATTC +
Preference number: 6 (lower is better)
Translates to: FAGPQPNQDQAA*RLSLLLLQELF
Trigger: GAATAGCTCCTGGAGTAGTAACAATGAGAGACGGCAGGCAGCTTGATCCTGATTTGGTTGAGGCCCAGCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 72 bp AATGACCATCTTTCCCAGTGCACTTCTCTGCAGGGATaGGCCCAGGTAGAAAGGTGGCTGAATAATCACCAG +
Preference number: 6 (lower is better)
Translates to: NDHLSQCTSLQG*AQVERWLNNHQ
Trigger: CTGGTGATTATTCAGCCACCTTTCTACCTGGGCTCATCCCTGCAGAGAAGTGCACTGGGAAAGATGGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 72 bp CCACTCAGCAGCATCAATGAAGTCATGGAACAGAGCTaGATATCGGGCCAGGTGCTGCTGAAAGTGCTGTTT +
Preference number: 6 (lower is better)
Translates to: PLSSINEVMEQS*ISGQVLLKVLF
Trigger: AAACAGCACTTTCAGCAGCACCTGGCCCGATATCAAGCTCTGTTCCATGACTTCATTGATGCTGCTGAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 72 bp AATTTCCCTCCAGGAGCCAACCACTCTGGAGGAACATaGAGTTCAGAAAGGGCACCACAGAGCAAACATTTG +
Preference number: 6 (lower is better)
Translates to: NFPPGANHSGGT*SSERAPQSKHL
Trigger: CAAATGTTTGCTCTGTGGTGCCCTTTCTGAACTTCATGTTCCTCCAGAGTGGTTGGCTCCTGGAGGGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 72 bp GACCCATCTCCTCTGACCTTTCGCACAGATGTGCCATaGCACCAATTACAAGCTGTTAGGTTACTCATTCCA +
Preference number: 6 (lower is better)
Translates to: DPSPLTFRTDVP*HQLQAVRLLIP
Trigger: TGGAATGAGTAACCTAACAGCTTGTAATTGGTGCCATGGCACATCTGTGCGAAAGGTCAGAGGAGATGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 90 bp AATGTCCTCCCACTCAGCAGCATCAATGAAGTCATGGAACAGAGCTaGATATCGGGCCAGGTGCTGCTGAAAGTGCTGTTTAAGATTCTC +
Preference number: 6 (lower is better)
Translates to: NVLPLSSINEVMEQS*ISGQVLLKVLFKIL
Trigger: GAGAATCTTAAACAGCACTTTCAGCAGCACCTGGCCCGATATCAAGCTCTGTTCCATGACTTCATTGATGCTGCTGAGTGGGAGGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 72 bp GGCCTGTCTGTTTGTCCATTCCATAGCGAGCTAATATaGGCGACAACAATTTGCAGTGATAGTTGGAAAGGC +
Preference number: 6 (lower is better)
Translates to: GLSVCPFHSELI*ATTICSDSWKG
Trigger: GCCTTTCCAACTATCACTGCAAATTGTTGTCGCCCATATTAGCTCGCTATGGAATGGACAAACAGACAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 72 bp TCCACATGCACTGGAATGAGACATTCCTGGCTTTTATaGGCCCGCTTAATGTCCTCCAGAGTGTCATGCAAA +
Preference number: 6 (lower is better)
Translates to: STCTGMRHSWLL*ARLMSSRVSCK
Trigger: TTTGCATGACACTCTGGAGGACATTAAGCGGGCCAATAAAAGCCAGGAATGTCTCATTCCAGTGCATGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 90 bp AGGGGATATAATGGTTTCTACCGGAGCTGCTCCATGCAATACAGATaGGTTTGTTCAAATGACCATCTTTCCCAGTGCACTTCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: RGYNGFYRSCSMQYR*VCSNDHLSQCTSLQ
Trigger: CTGCAGAGAAGTGCACTGGGAAAGATGGTCATTTGAACAAACCAATCTGTATTGCATGGAGCAGCTCCGGTAGAAACCATTATATCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 90 bp GAAAGCTGTAATTTTTGTCAGTCCTCAGCTGTCCATGAGTACTTTTaGCCAGGTTATACAATTTCCCTCCAGGAGCCAACCACTCTGGAG +
Preference number: 6 (lower is better)
Translates to: ESCNFCQSSAVHEYF*PGYTISLQEPTTLE
Trigger: CTCCAGAGTGGTTGGCTCCTGGAGGGAAATTGTATAACCTGGCAAAAAGTACTCATGGACAGCTGAGGACTGACAAAAATTACAGCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS GCA 72 bp CCATTCCATAGCGAGCTAATATGGGCGACAACAATTTaGAGTGATAGTTGGAAAGGCCCATCACCTTTACCA +
Preference number: 6 (lower is better)
Translates to: PFHSELIWATTI*SDSWKGPSPLP
Trigger: TGGTAAAGGTGATGGGCCTTTCCAACTATCACTGCAAATTGTTGTCGCCCATATTAGCTCGCTATGGAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 72 bp GAGCTAATATGGGCGACAACAATTTGCAGTGATAGTTaGAAAGGCCCATCACCTTTACCAGTTCCGTGTTCT +
Preference number: 6 (lower is better)
Translates to: ELIWATTICSDS*KGPSPLPVPCS
Trigger: AGAACACGGAACTGGTAAAGGTGATGGGCCTTTCCAACTATCACTGCAAATTGTTGTCGCCCATATTAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 90 bp ATGCCACTGAGGGAATCTAACAGAATAATAGGACGATGTAGCACATaGGCAAGACCAAATATGTGGATATTCCTCAGGCCCAAGGGAACA +
Preference number: 6 (lower is better)
Translates to: MPLRESNRIIGRCST*ARPNMWIFLRPKGT
Trigger: TGTTCCCTTGGGCCTGAGGAATATCCACATATTTGGTCTTGCCAATGTGCTACATCGTCCTATTATTCTGTTAGATTCCCTCAGTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 72 bp CTGCTCTGTACTTTGATCCCGAAGGTGCCTGTCCATTaGAGCCTGAATAGAAGAAACCATTTCCTGCAATTT +
Preference number: 6 (lower is better)
Translates to: LLCTLIPKVPVH*SLNRRNHFLQF
Trigger: AAATTGCAGGAAATGGTTTCTTCTATTCAGGCTTCAATGGACAGGCACCTTCGGGATCAAAGTACAGAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS GCA 72 bp TGCCTACCAAGGGGATATAATGGTTTCTACCGGAGCTaGTCCATGCAATACAGATTGGTTTGTTCAAATGAC +
Preference number: 6 (lower is better)
Translates to: CLPRGYNGFYRS*SMQYRLVCSND
Trigger: GTCATTTGAACAAACCAATCTGTATTGCATGGAGCAGCTCCGGTAGAAACCATTATATCCCCTTGGTAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS GCA 72 bp ATTTTTGTCAGTCCTCAGCTGTCCATGAGTACTTTTTaGCAGGTTATACAATTTCCCTCCAGGAGCCAACCA +
Preference number: 6 (lower is better)
Translates to: IFVSPQLSMSTF*QVIQFPSRSQP
Trigger: TGGTTGGCTCCTGGAGGGAAATTGTATAACCTGGCAAAAAGTACTCATGGACAGCTGAGGACTGACAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 72 bp AATGGTTTCTACCGGAGCTGCTCCATGCAATACAGATaGGTTTGTTCAAATGACCATCTTTCCCAGTGCACT +
Preference number: 6 (lower is better)
Translates to: NGFYRSCSMQYR*VCSNDHLSQCT
Trigger: AGTGCACTGGGAAAGATGGTCATTTGAACAAACCAATCTGTATTGCATGGAGCAGCTCCGGTAGAAACCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 72 bp AATTTTTGTCAGTCCTCAGCTGTCCATGAGTACTTTTaGCCAGGTTATACAATTTCCCTCCAGGAGCCAACC +
Preference number: 6 (lower is better)
Translates to: NFCQSSAVHEYF*PGYTISLQEPT
Trigger: GGTTGGCTCCTGGAGGGAAATTGTATAACCTGGCAAAAAGTACTCATGGACAGCTGAGGACTGACAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 72 bp GGTAGATTGTCATACTCCTTACCATCCCAAAAGTGTTaGAATCCACAACCACATTTGCCACCAGTGGACCTA +
Preference number: 6 (lower is better)
Translates to: GRLSYSLPSQKC*NPQPHLPPVDL
Trigger: TAGGTCCACTGGTGGCAAATGTGGTTGTGGATTCAAACACTTTTGGGATGGTAAGGAGTATGACAATCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CCA 72 bp AGAAGCATTATAGACAAAGGTTTTGCCAGGCAGATGTaGAAAAGTACAATGCTTGCCATCAGCCATACCCAT +
Preference number: 6 (lower is better)
Translates to: RSIIDKGFARQM*KSTMLAISHTH
Trigger: ATGGGTATGGCTGATGGCAAGCATTGTACTTTTCCACATCTGCCTGGCAAAACCTTTGTCTATAATGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 72 bp AGGGAATCTAACAGAATAATAGGACGATGTAGCACATaGGCAAGACCAAATATGTGGATATTCCTCAGGCCC +
Preference number: 6 (lower is better)
Translates to: RESNRIIGRCST*ARPNMWIFLRP
Trigger: GGGCCTGAGGAATATCCACATATTTGGTCTTGCCAATGTGCTACATCGTCCTATTATTCTGTTAGATTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 72 bp TGGACATCAGCAACCAAACTAGGATGGATACCATGTTaGTCCATAAAGACTTCTTCCATAGCAGCAACAAGC +
Preference number: 6 (lower is better)
Translates to: WTSATKLGWIPC*SIKTSSIAATS
Trigger: GCTTGTTGCTGCTATGGAAGAAGTCTTTATGGACAAACATGGTATCCATCCTAGTTTGGTTGCTGATGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 72 bp ATGCCCTTTTCCCTGAAAGGCAGTTACGTTATGAAGTaGCTCAGATTTCTTTTTCACTACTCCACCACTACC +
Preference number: 6 (lower is better)
Translates to: MPFSLKGSYVMK*LRFLFHYSTTT
Trigger: GGTAGTGGTGGAGTAGTGAAAAAGAAATCTGAGCAACTTCATAACGTAACTGCCTTTCAGGGAAAAGGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 72 bp AAGATTCAGGCAAACCAGTCTGAAGACTCCCAGACTTaGCAGAAGAACTCACAACTTCTGTTTTCCTTTGAG +
Preference number: 6 (lower is better)
Translates to: KIQANQSEDSQT*QKNSQLLFSFE
Trigger: CTCAAAGGAAAACAGAAGTTGTGAGTTCTTCTGCAAAGTCTGGGAGTCTTCAGACTGGTTTGCCTGAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 90 bp TCATACTCCTTACCATCCCAAAAGTGTTTGAATCCACAACCACATTaGCCACCAGTGGACCTAGAATTAGTTCTGTCTCCATCCAAATAC +
Preference number: 6 (lower is better)
Translates to: SYSLPSQKCLNPQPH*PPVDLELVLSPSKY
Trigger: GTATTTGGATGGAGACAGAACTAATTCTAGGTCCACTGGTGGCAAATGTGGTTGTGGATTCAAACACTTTTGGGATGGTAAGGAGTATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 72 bp GATTCCCTACTTCTTGTAGTAGCCTCTGCTCGAACCTaGCTTACAGCCTCTTTAACTAAATCTTCAACATCA +
Preference number: 6 (lower is better)
Translates to: DSLLLVVASART*LTASLTKSSTS
Trigger: TGATGTTGAAGATTTAGTTAAAGAGGCTGTAAGTCAGGTTCGAGCAGAGGCTACTACAAGAAGTAGGGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 72 bp ACTAAAGTCTGTCCCTGTATTATGCTTTCTTACAACTaGAGTTTCCCTAGCTCTTGGATCAAGGTGTGGGTT +
Preference number: 6 (lower is better)
Translates to: TKVCPCIMLSYN*SFPSSWIKVWV
Trigger: AACCCACACCTTGATCCAAGAGCTAGGGAAACTTCAGTTGTAAGAAAGCATAATACAGGGACAGACTTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 90 bp AAAGCTTCTGGTAGATTGTCATACTCCTTACCATCCCAAAAGTGTTaGAATCCACAACCACATTTGCCACCAGTGGACCTAGAATTAGTT +
Preference number: 6 (lower is better)
Translates to: KASGRLSYSLPSQKC*NPQPHLPPVDLELV
Trigger: AACTAATTCTAGGTCCACTGGTGGCAAATGTGGTTGTGGATTCAAACACTTTTGGGATGGTAAGGAGTATGACAATCTACCAGAAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 90 bp ACTCTTCCACCCCATTCTAAAGTAATAGGGAAAGCTTCTGGTAGATaGTCATACTCCTTACCATCCCAAAAGTGTTTGAATCCACAACCA +
Preference number: 6 (lower is better)
Translates to: TLPPHSKVIGKASGR*SYSLPSQKCLNPQP
Trigger: TGGTTGTGGATTCAAACACTTTTGGGATGGTAAGGAGTATGACAATCTACCAGAAGCTTTCCCTATTACTTTAGAATGGGGTGGAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 90 bp TTAAAGGAAAAGATTCAGGCAAACCAGTCTGAAGACTCCCAGACTTaGCAGAAGAACTCACAACTTCTGTTTTCCTTTGAGGAAGATCAG +
Preference number: 6 (lower is better)
Translates to: LKEKIQANQSEDSQT*QKNSQLLFSFEEDQ
Trigger: CTGATCTTCCTCAAAGGAAAACAGAAGTTGTGAGTTCTTCTGCAAAGTCTGGGAGTCTTCAGACTGGTTTGCCTGAATCTTTTCCTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS CAA 72 bp CCCCATTCTAAAGTAATAGGGAAAGCTTCTGGTAGATaGTCATACTCCTTACCATCCCAAAAGTGTTTGAAT +
Preference number: 6 (lower is better)
Translates to: PHSKVIGKASGR*SYSLPSQKCLN
Trigger: ATTCAAACACTTTTGGGATGGTAAGGAGTATGACAATCTACCAGAAGCTTTCCCTATTACTTTAGAATGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 72 bp CATTTCTTTTTCAGCTTGCTCCTGAAGTTCCTTAGATaGCAGTTTACCAGTAACAGCAATATCTTCTTGTTT +
Preference number: 6 (lower is better)
Translates to: HFFFSLLLKFLR*QFTSNSNIFLF
Trigger: AAACAAGAAGATATTGCTGTTACTGGTAAACTGTCATCTAAGGAACTTCAGGAGCAAGCTGAAAAAGAAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310421.5
CDS TCA 72 bp TTCTGCATTACAGAAGCCTGTTCCGTAATATTCTGTTaGATAGTTCTTTCAGTTTTACTCATGTTTAACTCC +
Preference number: 6 (lower is better)
Translates to: FCITEACSVIFC*IVLSVLLMFNS
Trigger: GGAGTTAAACATGAGTAAAACTGAAAGAACTATTCAACAGAATATTACGGAACAGGCTTCTGTAATGCAGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310421.5