RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VCAN (Homo sapiens)

Ensembl gene IDs: ENSG00000038427

Ensembl transcript IDs: ENST00000265077.8, ENST00000342785.8, ENST00000343200.9, ENST00000502527.2, ENST00000503923.1, ENST00000505615.1, ENST00000507162.1, ENST00000512590.6, ENST00000513016.5, ENST00000513960.5, ENST00000513984.5, ENST00000515397.1

Found 1130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCTGTGGTTTTAACCATATCACTGCTGTTCAGTTTGCTTGCTTTTaGAAATCACTGAACTGTTTCCATTCCGTGCACACACTGCAAGAC +
Preference number: 1 (lower is better)
Translates to: SCGFNHITAVQFACF*KSLNCFHSVHTLQD
Trigger: GTCTTGCAGTGTGTGCACGGAATGGAAACAGTTCAGTGATTTTCAAAAGCAAGCAAACTGAACAGCAGTGATATGGTTAAAACCACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513984.5
3UTR GCA 90 bp ATGGGGAGAAATGTCAACACATACACTCCACCTAACAGGAAGAAATaGCCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCA +
Preference number: 1 (lower is better)
Translates to: MGRNVNTYTPPNRKK*PHYFYIFAHFLEWA
Trigger: TGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAGTGTATGTGTTGACATTTCTCCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
3UTR-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGAACTGCACCTATGGCTaGGATAGGTGCAATGACCTA +
Preference number: 2 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMNCTYG*DRCNDL
Trigger: TAGGTCATTGCACCTATCTCAGCCATAGGTGCAGTT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
3UTR-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCACGGCAACCCAAAATaGCTGAACGGTGGTCCAAAA +
Preference number: 2 (lower is better)
Translates to: GKAIFSLADSQRASETISHGNPK*LNGGPK
Trigger: TTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
3UTR-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGAAGCAGCCGAACCAATaGTTAAAGACCTCTAAGGCT +
Preference number: 2 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMKQPNQ*LKTSKA
Trigger: AGCCTTAGAGGTCTTTAATCATTGGTTCGGCTGCTT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
3UTR-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAAGCAGCCGAACCAATaGTTAAAGACCTCTAAGGCT +
Preference number: 2 (lower is better)
Translates to: SCPGKAIFSLADSQRASEKQPNQ*LKTSKA
Trigger: AGCCTTAGAGGTCTTTAATCATTGGTTCGGCTGCTT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
3UTR-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCAGTCAAAGAGCAAGTaGAACCATTTCCAGCCTAAA +
Preference number: 2 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMQSKSK*NHFQPK
Trigger: TTTAGGCTGGAAATGGTTTCACTTGCTCTTTGACTG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
3UTR-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGCAACCCAAAATGACTaGACGGTGGTCCAAAAATCC +
Preference number: 2 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPATQND*TVVQKS
Trigger: GGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
3UTR-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAGCAGCCGAACCAATaGTTAAAGACCTCTAAGGCT +
Preference number: 2 (lower is better)
Translates to: GKAIFSLADSQRASETISKQPNQ*LKTSKA
Trigger: AGCCTTAGAGGTCTTTAATCATTGGTTCGGCTGCTT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
3UTR-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGTATACATTAGGAAATaGACTGCACTGGAGGCAAAT +
Preference number: 2 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQVYIRK*TALEAN
Trigger: ATTTGCCTCCAGTGCAGTCCATTTCCTAATGTATAC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
3UTR-3UTR GCA 90 bp GGATTTAACTCAGCCTCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGATTCCGTGCACACACTaGAAGACATGGAATCCACTC +
Preference number: 2 (lower is better)
Translates to: GFNSASVGLGIVTPINKLIPCTH*KTWNPL
Trigger: GAGTGGATTCCATGTCTTGCAGTGTGTGCACGGAAT...CAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGAGGCTGAGTTAAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513984.5
3UTR-3UTR GCA 90 bp GACAAAATCAACAATCTTAAGGATTTAACTCAGCCTCAGTTGGCCTTGGCATTGACTGTTTCCATTCCGTaGACACACTGCAAGACATGG +
Preference number: 2 (lower is better)
Translates to: DKINNLKDLTQPQLALALTVSIP*THCKTW
Trigger: CCATGTCTTGCAGTGTGTGCACGGAATGGAAACAGT...CAATGCCAAGGCCAACTGAGGCTGAGTTAAATCCTTAAGATTGTTGATTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
3UTR-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAAAATGACTGAACGGTaGTCCAAAAATCCAAACCAA +
Preference number: 2 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQKMTER*SKNPNQ
Trigger: TTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
3UTR-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTCATTTAAAATGTTTTaGGAGCACGGCAACCCAAAA +
Preference number: 2 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQSFKMF*EHGNPK
Trigger: TTTTGGGTTGCCGTGCTCCCAAAACATTTTAAATGA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
3UTR-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGTATACATTAGGAAATaGACTGCACTGGAGGCAAAT +
Preference number: 2 (lower is better)
Translates to: SCPGKAIFSLADSQRASEVYIRK*TALEAN
Trigger: ATTTGCCTCCAGTGCAGTCCATTTCCTAATGTATAC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
3UTR-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGATCATCTTATTTACATaGCCATCGGTGCTGAAATTG +
Preference number: 2 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQIILFT*PSVLKL
Trigger: CAATTTCAGCACCGATGGCCATGTAAATAAGATGAT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
3UTR-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTGCAACCCAAAATGACTaGACGGTGGTCCAAAAATCC +
Preference number: 2 (lower is better)
Translates to: LHLTGRNAHTISIYSLISATQND*TVVQKS
Trigger: GGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGC...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
3UTR-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCACGGCAACCCAAAATaGCTGAACGGTGGTCCAAAA +
Preference number: 2 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCHGNPK*LNGGPK
Trigger: TTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
3UTR-3UTR CCA 90 bp GTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTGCAACACACTGCAAGACATaGAATCCACTCCAACGGCTA +
Preference number: 2 (lower is better)
Translates to: VGLGIVTPINKLQNLRTATHCKT*NPLQRL
Trigger: TAGCCGTTGGAGTGGATTCCATGTCTTGCAGTGTGT...TGCAGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
3UTR-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGCAACCCAAAATGACTaGACGGTGGTCCAAAAATCC +
Preference number: 2 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCATQND*TVVQKS
Trigger: GGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
3UTR-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCAACTGCACCTATGGCTaGGATAGGTGCAATGACCTA +
Preference number: 2 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCNCTYG*DRCNDL
Trigger: TAGGTCATTGCACCTATCTCAGCCATAGGTGCAGTT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
3UTR-3UTR GCA 90 bp TGTGGCTCTGGACACAACAGAGCACAGTTACAGCTTAACCTGATATTTCCTCACCTAGTTGAACATCAATaGATGCTTCGAAGCATTTTT +
Preference number: 2 (lower is better)
Translates to: CGSGHNRAQLQLNLIFPHLVEHQ*MLRSIF
Trigger: AAAAATGCTTCGAAGCATGCATTGATGTTCAACTAG...GTGAGGAAATATCAGGTTAAGCTGTAACTGTGCTCTGTTGTGTCCAGAGCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513984.5
3UTR-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAAATGACTGAACGGTaGTCCAAAAATCCAAACCAA +
Preference number: 2 (lower is better)
Translates to: GKAIFSLADSQRASETISKMTER*SKNPNQ
Trigger: TTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
3UTR-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTCATTTAAAATGTTTTaGGAGCACGGCAACCCAAAA +
Preference number: 2 (lower is better)
Translates to: GKAIFSLADSQRASETISSFKMF*EHGNPK
Trigger: TTTTGGGTTGCCGTGCTCCCAAAACATTTTAAATGA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
3UTR-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAATAGTACAGTAGGCTaGTATACATTAGGAAATGGA +
Preference number: 2 (lower is better)
Translates to: SCPGKAIFSLADSQRASENSTVG*YTLGNG
Trigger: TCCATTTCCTAATGTATACCAGCCTACTGTACTATT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
3UTR-3UTR CCA 90 bp TCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTAATGCTCTGTGGCTCTaGACACAACAGAGCACAGTT +
Preference number: 2 (lower is better)
Translates to: SVGLGIVTPINKLQNLRTNALWL*TQQSTV
Trigger: AACTGTGCTCTGTTGTGTCCAGAGCCACAGAGCATT...AGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
3UTR-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAGGTCTATATCCGTATaGAATGCATTGATCGGTAAC +
Preference number: 2 (lower is better)
Translates to: LHLTGRNAHTISIYSLISRSISV*NALIGN
Trigger: GTTACCGATCAATGCATTTCATACGGATATAGACCT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
3UTR-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTCATTTAAAATGTTTTaGGAGCACGGCAACCCAAAA +
Preference number: 2 (lower is better)
Translates to: LHLTGRNAHTISIYSLISSFKMF*EHGNPK
Trigger: TTTTGGGTTGCCGTGCTCCCAAAACATTTTAAATGA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
3UTR-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTATCATCTTATTTACATaGCCATCGGTGCTGAAATTG +
Preference number: 2 (lower is better)
Translates to: LHLTGRNAHTISIYSLISIILFT*PSVLKL
Trigger: CAATTTCAGCACCGATGGCCATGTAAATAAGATGAT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
3UTR-3UTR GCA 90 bp TCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTAAATACTTAGAAAAATaGTCTGTGGCTCTGGACACA +
Preference number: 2 (lower is better)
Translates to: SVGLGIVTPINKLQNLRTKYLEK*SVALDT
Trigger: TGTGTCCAGAGCCACAGAGCATTTTTCTAAGTATTT...AGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513984.5
3UTR-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCAATAGTACAGTAGGCTaGTATACATTAGGAAATGGA +
Preference number: 2 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCNSTVG*YTLGNG
Trigger: TCCATTTCCTAATGTATACCAGCCTACTGTACTATT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
3UTR-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCAGGAAGTTAGGACTTaGGCTGAAATGATGAAAACA +
Preference number: 3 (lower is better)
Translates to: GARQPKMTERWSKNPNQLQEVRT*AEMMKT
Trigger: TGTTTTCATCATTTCAGCCAAAGTCCTAACTTCCTG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
3UTR-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCAGGAAGTTAGGACTTaGGCTGAAATGATGAAAACA +
Preference number: 3 (lower is better)
Translates to: GKAIFSLADSQRASETISQEVRT*AEMMKT
Trigger: TGTTTTCATCATTTCAGCCAAAGTCCTAACTTCCTG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
3UTR-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCAGGAAGTTAGGACTTaGGCTGAAATGATGAAAACA +
Preference number: 3 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCQEVRT*AEMMKT
Trigger: TGTTTTCATCATTTCAGCCAAAGTCCTAACTTCCTG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
3UTR-3UTR CAA 90 bp TCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTTGCTGTTCAGTTTGCTaGCTTTTGAAAATCACTGAA +
Preference number: 3 (lower is better)
Translates to: SVGLGIVTPINKLQNLRTCCSVC*LLKITE
Trigger: TTCAGTGATTTTCAAAAGCAAGCAAACTGAACAGCA...AGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513984.5
3UTR GCA 72 bp AATGTCAACACATACACTCCACCTAACAGGAAGAAATaGCCACACTATTTCTATATATTCGCTCATTTCTTA +
Preference number: 3 (lower is better)
Translates to: NVNTYTPPNRKK*PHYFYIFAHFL
Trigger: TAAGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAGTGTATGTGTTGACATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTGGCCCGGGGAAGGATaGGGAGGGTGCGGGACGGTG +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMWPGEG*GGCGTV
Trigger: CACCGTCCCGCACCCTCCGCATCCTTCCCCGGGCCA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGCAGCGCTGCGCGACTaGGTTCGGCGTTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQAALRD*VRRCPG
Trigger: GCCTGGGCAACGCCGAACCCAGTCGCGCAGCGCTGC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGACGGTGCTGGAAGATaGGGGAGGATGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLDGAGR*GRMRGW
Trigger: CCAGCCCCGCATCCTCCCGCATCTTCCAGCACCGTC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATGGCCCGGGGAAGGATaGGGAGGGTGCGGGACGGTG +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEWPGEG*GGCGTV
Trigger: CACCGTCCCGCACCCTCCGCATCCTTCCCCGGGCCA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGGTGCGGGACGGTGCTaGAAGATGCGGGAGGATGCG +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLGAGRC*KMREDA
Trigger: CGCATCCTCCCGCATCTTCCAGCACCGTCCCGCACC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGCAGCGCTGCGCGACTaGGTTCGGCGTTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEAALRD*VRRCPG
Trigger: GCCTGGGCAACGCCGAACCCAGTCGCGCAGCGCTGC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCAGGGTGGCGCACGCTaGCATCCGACAGCCACCCGT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMQGGAR*HPTATR
Trigger: ACGGGTGGCTGTCGGATGCCAGCGTGCGCCACCCTG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGCCACAGTCACAGGGTaGCGCACGCTGGCATCCGAC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLATVTG*RTLASD
Trigger: GTCGGATGCCAGCGTGCGCCACCCTGTGACTGTGGC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCTCCACACTGGGCCCTaGCCACAGTCACAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLLHTGP*PQSQGG
Trigger: GCCACCCTGTGACTGTGGCCAGGGCCCAGTGTGGAG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTGGCCCGGGGAAGGATaGGGAGGGTGCGGGACGGTG +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISWPGEG*GGCGTV
Trigger: CACCGTCCCGCACCCTCCGCATCCTTCCCCGGGCCA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCAGCGCCTCGACTCCTaGCACCTCCGGCTCCAACGA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQQRLDS*HLRLQR
Trigger: TCGTTGGAGCCGGAGGTGGCAGGAGTCGAGGCGCTG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGGTGCGGGACGGTGCTaGAAGATGCGGGAGGATGCG +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQGAGRC*KMREDA
Trigger: CGCATCCTCCCGCATCTTCCAGCACCGTCCCGCACC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGCAGCGCTGCGCGACTaGGTTCGGCGTTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISAALRD*VRRCPG
Trigger: GCCTGGGCAACGCCGAACCCAGTCGCGCAGCGCTGC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCTCCACACTGGGCCCTaGCCACAGTCACAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMLHTGP*PQSQGG
Trigger: GCCACCCTGTGACTGTGGCCAGGGCCCAGTGTGGAG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGACGGTGCTGGAAGATaGGGGAGGATGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEDGAGR*GRMRGW
Trigger: CCAGCCCCGCATCCTCCCGCATCTTCCAGCACCGTC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATGGCCCGGGGAAGGATaGGGAGGGTGCGGGACGGTG +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPWPGEG*GGCGTV
Trigger: CACCGTCCCGCACCCTCCGCATCCTTCCCCGGGCCA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGACTGGGTTCGGCGTTaGCCAGGCGGGTCACATAGG +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQDWVRR*PGGSHR
Trigger: CCTATGTGACCCGCCTGGGCAACGCCGAACCCAGTC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGCCACGCCTAGCTTCTaGAGCTTCTGGGTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLATPSF*SFWVLG
Trigger: CCCAAGGACCCAGAAGCTGCAGAAGCTAGGCGTGGC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGCAGCGCTGCGCGACTaGGTTCGGCGTTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPAALRD*VRRCPG
Trigger: GCCTGGGCAACGCCGAACCCAGTCGCGCAGCGCTGC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGCCACAGTCACAGGGTaGCGCACGCTGGCATCCGAC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEATVTG*RTLASD
Trigger: GTCGGATGCCAGCGTGCGCCACCCTGTGACTGTGGC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGAGACCACCTCCACACTaGGCCCTGGCCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLRPPPH*ALATVT
Trigger: TGTGACTGTGGCCAGGGCCCAGTGTGGAGGTGGTCT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGCTTGCTGGGGGCTGTaGCGTAGAAAGCGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMACWGL*RRKRLR
Trigger: CCTCAGGCGCTTTCTACGCCACAGCCCCCAGCAAGC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGGCAGAGCACTGGGCTaGGGGATCTCTGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLGRALG*GISVCP
Trigger: TGGACACACAGAGATCCCCCAGCCCAGTGCTCTGCC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGGAAGGCTGAAGTGCTaGCCATGGTGCTACTGGGTC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLGRLKC*PWCYWV
Trigger: GACCCAGTAGCACCATGGTCAGCACTTCAGCCTTCC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGACGGTGCTGGAAGATaGGGGAGGATGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISDGAGR*GRMRGW
Trigger: CCAGCCCCGCATCCTCCCGCATCTTCCAGCACCGTC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGACTGGGTTCGGCGTTaGCCAGGCGGGTCACATAGG +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEDWVRR*PGGSHR
Trigger: CCTATGTGACCCGCCTGGGCAACGCCGAACCCAGTC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGAATTCACTGCAGCGCTaGGCGACTGGGTTCGGCGTT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLNSLQR*ATGFGV
Trigger: AACGCCGAACCCAGTCGCGCAGCGCTGCAGTGAATT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGAGTTCCCCCACTGTTaGCAGCCTGGCATCCTGGTT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLEFPHC*QPGILV
Trigger: AACCAGGATGCCAGGCTGGCAACAGTGGGGGAACTC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGAAAGCCGTTCCTCCATaGCGCCTGGAGTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMKAVPP*RLEFPH
Trigger: GTGGGGGAACTCCAGGCGGCATGGAGGAACGGCTTT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAAAGCCGTTCCTCCATaGCGCCTGGAGTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQKAVPP*RLEFPH
Trigger: GTGGGGGAACTCCAGGCGGCATGGAGGAACGGCTTT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGCCACGCCTAGCTTCTaGAGCTTCTGGGTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQATPSF*SFWVLG
Trigger: CCCAAGGACCCAGAAGCTGCAGAAGCTAGGCGTGGC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGTGAGATGGGCACCCTaGAGACGGCATTCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLVRWAP*RRHSRS
Trigger: TGAACGGGAATGCCGTCTGCAGGGTGCCCATCTCAC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTTGCGTCCGCACGCCTaGAGTTCTTCCCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLLRPHA*SSSPER
Trigger: CCTTTCTGGGGAAGAACTCCAGGCGTGCGGACGCAA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGGGAGGATGCGGGGCTaGCCGAAGATCTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEGRMRG*PKILVP
Trigger: TGGGACCAAGATCTTCGGCCAGCCCCGCATCCTCCC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGGAGCCCCTCACCGGTaGGCTTTTTCCCACTTTGAC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLGAPHR*AFSHFD
Trigger: GTCAAAGTGGGAAAAAGCCCACCGGTGAGGGGCTCC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGACTACGTGGGAGAGTaGTCAGCCCTTCCTGAACCC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLDYVGE*SALPEP
Trigger: GGGTTCAGGAAGGGCTGACCACTCTCCCACGTAGTC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGGCAGAGCACTGGGCTaGGGGATCTCTGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMGRALG*GISVCP
Trigger: TGGACACACAGAGATCCCCCAGCCCAGTGCTCTGCC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCCCATCCACAGTCAGTaGCACCGTGTCTTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLPIHSQ*HRVLCV
Trigger: GACACACAAGACACGGTGTCACTGACTGTGGATGGG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGGCGTAGAAAGCGCCTaGGGTCCAAAGGCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMGVESA*GPKASL
Trigger: CAAAGAGGCCTTTGGACCTCAGGCGCTTTCTACGCC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTTCCCAGGGGAAGGCTaGAGTGCTGACCATGGTGCT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQFPGEG*SADHGA
Trigger: AGCACCATGGTCAGCACTTCAGCCTTCCCCTGGGAA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGAGACAGGATGCTTGTaGGATGGGCACCCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMETGCL*DGHPAD
Trigger: GTCTGCAGGGTGCCCATCTCACAAGCATCCTGTCTC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGAAGATGCGGGAGGATaGGGGGCTGGCCGAAGATCT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEEDAGG*GAGRRS
Trigger: AGATCTTCGGCCAGCCCCGCATCCTCCCGCATCTTC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGACGGTGCTGGAAGATaGGGGAGGATGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPDGAGR*GRMRGW
Trigger: CCAGCCCCGCATCCTCCCGCATCTTCCAGCACCGTC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAATTCACTGCAGCGCTaGGCGACTGGGTTCGGCGTT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQNSLQR*ATGFGV
Trigger: AACGCCGAACCCAGTCGCGCAGCGCTGCAGTGAATT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGAGTTCCCCCACTGTTaGCAGCCTGGCATCCTGGTT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMEFPHC*QPGILV
Trigger: AACCAGGATGCCAGGCTGGCAACAGTGGGGGAACTC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCCAAGGCACCACACCTaGCTCGACCCCATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISPRHHT*LDPIGG
Trigger: GCCACCTATGGGGTCGAGGCAGGTGTGGTGCCTTGG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTGCAGCAGCGCTGCGCGACTaGGTTCGGCGTTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VGLGIVTPINKLQNLRTAAALRD*VRRCPG
Trigger: GCCTGGGCAACGCCGAACCCAGTCGCGCAGCGCTGC...TGCAGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCAGCCTCGGGATGTGTaGGCACAGACACTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQQPRDV*AQTLSL
Trigger: AAGGGAGAGTGTCTGTGCCCACACATCCCGAGGCTG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGCCACAGTCACAGGGTaGCGCACGCTGGCATCCGAC +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPATVTG*RTLASD
Trigger: GTCGGATGCCAGCGTGCGCCACCCTGTGACTGTGGC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAGACCACCTCCACACTaGGCCCTGGCCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASERPPPH*ALATVT
Trigger: TGTGACTGTGGCCAGGGCCCAGTGTGGAGGTGGTCT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAGAGGCAGGACTACGTaGGAGAGTGGTCAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQRGRTT*ESGQPF
Trigger: GAAGGGCTGACCACTCTCCCACGTAGTCCTGCCTCT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTCTACAACAGGGGGCTaGCCGCAAGCGACTGTTCCT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQSTTGG*PQATVP
Trigger: AGGAACAGTCGCTTGCGGCCAGCCCCCTGTTGTAGA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCCATCCACAGTCAGTaGCACCGTGTCTTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQPIHSQ*HRVLCV
Trigger: GACACACAAGACACGGTGTCACTGACTGTGGATGGG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGCTCTGGAGTTGCTATaGCTGCCCCAACGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQALELL*LPQRPN
Trigger: GTTTGGACGTTGGGGCAGTCATAGCAACTCCAGAGC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTGGGGACATTACAGATaGGCCGACGTCTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLWGHYR*ADVYSW
Trigger: CCAGGAATAGACGTCGGCTCATCTGTAATGTCCCCA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGAGACAGGATGCTTGTaGGATGGGCACCCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEETGCL*DGHPAD
Trigger: GTCTGCAGGGTGCCCATCTCACAAGCATCCTGTCTC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGACTGGGTTCGGCGTTaGCCAGGCGGGTCACATAGG +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPDWVRR*PGGSHR
Trigger: CCTATGTGACCCGCCTGGGCAACGCCGAACCCAGTC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTGTGTACCTGCTGGTTaGCGCCCTGTAGTGAAACAC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLCVPAG*RPVVKH
Trigger: GTGTTTCACTACAGGGCGGCAACCAGCAGGTACACA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCAGGGTGAAATTTTGTaGTTGCTGGGGGCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQQGEIL*LLGAVA
Trigger: CGCCACAGCCCCCAGCAAGCACAAAATTTCACCCTG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCTGGGTGTCCCTAAATaGTGCATCTCCAGAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLLGVPK*CISRAF
Trigger: GAAGGCTCTGGAGATGCAGCATTTAGGGACACCCAG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGCATTCCCGTTCAGCTaGATCCCATGTGCGTCGATG +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQAFPFS*IPCASM
Trigger: CATCGACGCACATGGGATGCAGCTGAACGGGAATGC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGTGAGATGGGCACCCTaGAGACGGCATTCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEVRWAP*RRHSRS
Trigger: TGAACGGGAATGCCGTCTGCAGGGTGCCCATCTCAC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATCGGGGCAGCTCGCCTaGAAGTTCAAATGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASESGQLA*KFKCGL
Trigger: CAACCCGCATTTGAACTTGCAGGCGAGCTGCCCCGA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATTGCGTCCGCACGCCTaGAGTTCTTCCCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASELRPHA*SSSPER
Trigger: CCTTTCTGGGGAAGAACTCCAGGCGTGCGGACGCAA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGGAGCCCCTCACCGGTaGGCTTTTTCCCACTTTGAC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEGAPHR*AFSHFD
Trigger: GTCAAAGTGGGAAAAAGCCCACCGGTGAGGGGCTCC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACAGCCTCGGGATGTGTaGGCACAGACACTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEQPRDV*AQTLSL
Trigger: AAGGGAGAGTGTCTGTGCCCACACATCCCGAGGCTG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCTGGGGACAGTGAGGTaGAACACATCACCATCCAGA +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLLGTVR*NTSPSR
Trigger: TCTGGATGGTGATGTGTTCCACCTCACTGTCCCCAG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GCCTCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGGCCACAGTCACAGGGTaGCGCACGCTGGCATCCGAC +
Preference number: 4 (lower is better)
Translates to: ASVGLGIVTPINKLQNLRATVTG*RTLASD
Trigger: GTCGGATGCCAGCGTGCGCCACCCTGTGACTGTGGC...CCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGTCTTCCACAGTGGGTaGTCTTGTTGGCTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLVFHSG*SCWLCS
Trigger: GCTACACAGCCAACAAGACCACCCACTGTGGAAGAC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGCTTGCTGGGGGCTGTaGCGTAGAAAGCGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPACWGL*RRKRLR
Trigger: CCTCAGGCGCTTTCTACGCCACAGCCCCCAGCAAGC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAACAGTGGTGGTTTCTaGGTCGGCAGCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQNSGGF*VGSSFS
Trigger: GGAGAAGCTGCTGCCGACCCAGAAACCACCACTGTT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGATGTCCGATGTCCGTaGAGAAAGGGAGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQDVRCP*RKGEVP
Trigger: TGGCACCTCTCCCTTTCTCCACGGACATCGGACATC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGTCTCCGCTGTATCCTaGCACACAGGTGCATACGTA +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLVSAVS*HTGAYV
Trigger: TACGTATGCACCTGTGTGCCAGGATACAGCGGAGAC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATCTACAACAGGGGGCTaGCCGCAAGCGACTGTTCCT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASESTTGG*PQATVP
Trigger: AGGAACAGTCGCTTGCGGCCAGCCCCCTGTTGTAGA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACCCATCCACAGTCAGTaGCACCGTGTCTTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEPIHSQ*HRVLCV
Trigger: GACACACAAGACACGGTGTCACTGACTGTGGATGGG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTCATCCCCACAGTTGTaGGTAAGGCAGGGGGCAATT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQSSPQL*VRQGAI
Trigger: AATTGCCCCCTGCCTTACTCACAACTGTGGGGATGA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAGAGGCTTCACTGCCTaGGTAGATAGTGAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQRGFTA*VDSEGR
Trigger: TCTCCCCTCACTATCTACTCAGGCAGTGAAGCCTCT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTGGGGACATTACAGATaGGCCGACGTCTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQWGHYR*ADVYSW
Trigger: CCAGGAATAGACGTCGGCTCATCTGTAATGTCCCCA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTGCCACTTGCTGTTCTaGTGCTGCTATCGTGGAATC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLCHLLF*CCYRGI
Trigger: GATTCCACGATAGCAGCATCAGAACAGCAAGTGGCA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGAAGATGCGGGAGGATaGGGGGCTGGCCGAAGATCT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPEDAGG*GAGRRS
Trigger: AGATCTTCGGCCAGCCCCGCATCCTCCCGCATCTTC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp CCATCTCAAAGAAACAGAGTGATACCGAAGACAAAATCAACAATCTTAAGGATTTGGCCCGGGGAAGGATaGGGAGGGTGCGGGACGGTG +
Preference number: 4 (lower is better)
Translates to: PSQRNRVIPKTKSTILRIWPGEG*GGCGTV
Trigger: CACCGTCCCGCACCCTCCGCATCCTTCCCCGGGCCA...AATCCTTAAGATTGTTGATTTTGTCTTCGGTATCACTCTGTTTCTTTGAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR GCA 90 bp GCCTCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGGACTGGGTTCGGCGTTaGCCAGGCGGGTCACATAGG +
Preference number: 4 (lower is better)
Translates to: ASVGLGIVTPINKLQNLRDWVRR*PGGSHR
Trigger: CCTATGTGACCCGCCTGGGCAACGCCGAACCCAGTC...CCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGAAGACCCGCATCACTTaGCAGCAGCTTGACCACAGT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMKTRIT*QQLDHS
Trigger: ACTGTGGTCAAGCTGCTGGCAAGTGATGCGGGTCTT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTGTGTACCTGCTGGTTaGCGCCCTGTAGTGAAACAC +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMCVPAG*RPVVKH
Trigger: GTGTTTCACTACAGGGCGGCAACCAGCAGGTACACA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTGGAGTTGCTATGACTaGCCCAACGTCCAAACAAGC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLWSCYD*PNVQTS
Trigger: GCTTGTTTGGACGTTGGGGCAGTCATAGCAACTCCA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGAGCTGCTCTGGAGTTaGTATGACTGCCCCAACGTC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEELLWS*YDCPNV
Trigger: GACGTTGGGGCAGTCATAGCAACTCCAGAGCAGCTC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp TGTGGCTCTGGACACAACAGAGCACAGTTACAGCTTAACCTGATATTTCCTCACGAGCTGCTCTGGAGTTaGTATGACTGCCCCAACGTC +
Preference number: 4 (lower is better)
Translates to: CGSGHNRAQLQLNLIFPHELLWS*YDCPNV
Trigger: GACGTTGGGGCAGTCATAGCAACTCCAGAGCAGCTC...GTGAGGAAATATCAGGTTAAGCTGTAACTGTGCTCTGTTGTGTCCAGAGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGAGTTCCCCCACTGTTaGCAGCCTGGCATCCTGGTT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISEFPHC*QPGILV
Trigger: AACCAGGATGCCAGGCTGGCAACAGTGGGGGAACTC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCAGGTTGATGGATACTaGTGTGCTCAGTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLQVDGY*CAQWSV
Trigger: CACAGACCACTGAGCACAGCAGTATCCATCAACCTG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGGCACGGGTTCATTTTaGAGCGATCAGGTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMGTGSF*SDQVLV
Trigger: TACCAGGACCTGATCGCTGCAAAATGAACCCGTGCC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGCATTCCCGTTCAGCTaGATCCCATGTGCGTCGATG +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEAFPFS*IPCASM
Trigger: CATCGACGCACATGGGATGCAGCTGAACGGGAATGC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGTGAGATGGGCACCCTaGAGACGGCATTCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISVRWAP*RRHSRS
Trigger: TGAACGGGAATGCCGTCTGCAGGGTGCCCATCTCAC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTCTCGTATTGCAGTGTaGTGCCATCAGTCCAACGGA +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLSRIAV*CHQSNG
Trigger: TCCGTTGGACTGATGGCAGCACACTGCAATACGAGA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTCAGCGCCTCGACTCCTaGCACCTCCGGCTCCAACGA +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISQRLDS*HLRLQR
Trigger: TCGTTGGAGCCGGAGGTGGCAGGAGTCGAGGCGCTG...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGGCACGGGTTCATTTTaGAGCGATCAGGTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMGTGSF*SDQVLS
Trigger: AGACAGGACCTGATCGCTGCAAAATGAACCCGTGCC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTGCAGGTGCGGGACGGTGCTaGAAGATGCGGGAGGATGCG +
Preference number: 4 (lower is better)
Translates to: VGLGIVTPINKLQNLRTAGAGRC*KMREDA
Trigger: CGCATCCTCCCGCATCTTCCAGCACCGTCCCGCACC...TGCAGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTCAGTGTGTACCTGCTaGTTGCCGCCCTGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQSVCTC*LPPCSE
Trigger: TTCACTACAGGGCGGCAACCAGCAGGTACACACTGA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTCAGTGTGTACCTGCTaGTTGCCGCCCTGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMSVCTC*LPPCSE
Trigger: TTCACTACAGGGCGGCAACCAGCAGGTACACACTGA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGAGCAAAGAGCTGCTCTaGAGTTGCTATGACTGCCCC +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMSKELL*SCYDCP
Trigger: GGGGCAGTCATAGCAACTCCAGAGCAGCTCTTTGCT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCATAACAGCCTACTCTaGGAGCCCGGATGGGATATC +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMHNSLL*EPGWDI
Trigger: GATATCCCATCCGGGCTCCCAGAGTAGGCTGTTATG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCACTGTTGCCAGCCTaGCATCCTGGTTTTCACACT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQPLLPA*HPGFHT
Trigger: AGTGTGAAAACCAGGATGCCAGGCTGGCAACAGTGG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCAGGGTGGCGCACGCTaGCATCCGACAGCCACCCGT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCQGGAR*HPTATR
Trigger: ACGGGTGGCTGTCGGATGCCAGCGTGCGCCACCCTG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp TCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTCAGGGTGGCGCACGCTaGCATCCGACAGCCACCCGT +
Preference number: 4 (lower is better)
Translates to: SVGLGIVTPINKLQNLRTQGGAR*HPTATR
Trigger: ACGGGTGGCTGTCGGATGCCAGCGTGCGCCACCCTG...AGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTCTCCACACTGGGCCCTaGCCACAGTCACAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISLHTGP*PQSQGG
Trigger: GCCACCCTGTGACTGTGGCCAGGGCCCAGTGTGGAG...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGGAGGGAAGCCTGTCTaGTTCTCAAAACGATACAGG +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLGGKPV*FSKRYR
Trigger: CCTGTATCGTTTTGAGAACCAGACAGGCTTCCCTCC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGAGTGGGTGGTCTTGTTaGCTGTGTAGCAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMSGWSC*LCSRRT
Trigger: AGTCCTCCTGCTACACAGCCAACAAGACCACCCACT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAGTGGGTGGTCTTGTTaGCTGTGTAGCAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQSGWSC*LCSRRT
Trigger: AGTCCTCCTGCTACACAGCCAACAAGACCACCCACT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGTCTTCCACAGTGGGTaGTCTTGTTGGCTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMVFHSG*SCWLCS
Trigger: GCTACACAGCCAACAAGACCACCCACTGTGGAAGAC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAGCACTGGGAAGCACTaGAACAACAGAGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQSTGKH*NNRAAD
Trigger: GTCAGCAGCTCTGTTGTTCCAGTGCTTCCCAGTGCT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGAGACTTACGAGGAATTaGCAGGGATGTTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMRLTRN*QGCCRG
Trigger: CCCACGGCAACATCCCTGCCAATTCCTCGTAAGTCT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGTCTCCGCTGTATCCTaGCACACAGGTGCATACGTA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQVSAVS*HTGAYV
Trigger: TACGTATGCACCTGTGTGCCAGGATACAGCGGAGAC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGAAGAAGCTGTCTGGCTaGTTGGGTCTCCAATTCTCG +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLKKLSG*LGLQFS
Trigger: CGAGAATTGGAGACCCAACCAGCCAGACAGCTTCTT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAATGACAAGGTAGGCTaGCTTTTCCAGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQNDKVG*LFQRGS
Trigger: GCTCCCTCTCTGGAAAAGTCAGCCTACCTTGTCATT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGCTCTGGAGTTGCTATaGCTGCCCCAACGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISALELL*LPQRPN
Trigger: GTTTGGACGTTGGGGCAGTCATAGCAACTCCAGAGC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCTATCTGTGATAGCCTaGGGTTGGACTGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQLSVIA*GWTVAF
Trigger: GAAAGCCACAGTCCAACCTCAGGCTATCACAGATAG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACCTCTTCTCCCAAGGTaGATCCATAGTGACCTGTGG +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEPLLPR*IHSDLW
Trigger: CCACAGGTCACTATGGATTCACCTTGGGAGAAGAGG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTCGCGGAAGATGGCTTaGATGCTGAAGTTGTGTGAA +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLSRKMA*MLKLCE
Trigger: TTCACACAACTTCAGCATTCAAGCCATCTTCCGCGA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGGCGTAGAAAGCGCCTaGGGTCCAAAGGCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPGVESA*GPKASL
Trigger: CAAAGAGGCCTTTGGACCTCAGGCGCTTTCTACGCC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATTCCCAGGGGAAGGCTaGAGTGCTGACCATGGTGCT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPFPGEG*SADHGA
Trigger: AGCACCATGGTCAGCACTTCAGCCTTCCCCTGGGAA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGCTTTTGTTCTGCTCTaGATGAAGAGGCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLAFVLL*MKRQHH
Trigger: GTGATGCTGCCTCTTCATTCAGAGCAGAACAAAAGC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCACGGCAACCCAAAATaGCTGAACGGTGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMHGNPK*LNGGPK
Trigger: TTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGAACTGCACCTATGGCTaGGATAGGTGCAATGACCTA +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLNCTYG*DRCNDL
Trigger: TAGGTCATTGCACCTATCTCAGCCATAGGTGCAGTT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAATGTTCTCGGCTGTTaGGTCCGCACGCCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISNVLGC*VRTPGV
Trigger: AACTCCAGGCGTGCGGACGCAACAGCCGAGAACATT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp TCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTGACGGTGCTGGAAGATaGGGGAGGATGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SVGLGIVTPINKLQNLRTDGAGR*GRMRGW
Trigger: CCAGCCCCGCATCCTCCCGCATCTTCCAGCACCGTC...AGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAATTCACTGCAGCGCTaGGCGACTGGGTTCGGCGTT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPNSLQR*ATGFGV
Trigger: AACGCCGAACCCAGTCGCGCAGCGCTGCAGTGAATT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAAGACCCGCATCACTTaGCAGCAGCTTGACCACAGT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEKTRIT*QQLDHS
Trigger: ACTGTGGTCAAGCTGCTGGCAAGTGATGCGGGTCTT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp TGTGGCTCTGGACACAACAGAGCACAGTTACAGCTTAACCTGATATTTCCTCACTGTGTACCTGCTGGTTaGCGCCCTGTAGTGAAACAC +
Preference number: 4 (lower is better)
Translates to: CGSGHNRAQLQLNLIFPHCVPAG*RPVVKH
Trigger: GTGTTTCACTACAGGGCGGCAACCAGCAGGTACACA...GTGAGGAAATATCAGGTTAAGCTGTAACTGTGCTCTGTTGTGTCCAGAGCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGAGCTGCTCTGGAGTTaGTATGACTGCCCCAACGTC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISELLWS*YDCPNV
Trigger: GACGTTGGGGCAGTCATAGCAACTCCAGAGCAGCTC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGTGAAATTTTGTGCTTaGTGGGGGCTGTGGCGTAGA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMVKFCA*WGLWRR
Trigger: TCTACGCCACAGCCCCCAGCAAGCACAAAATTTCAC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGATTCTCGCTGCCACTTaGTGTTCTGATGCTGCTATC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLILAAT*CSDAAI
Trigger: GATAGCAGCATCAGAACAGCAAGTGGCAGCGAGAAT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCAGCTGCATCCCATGTaGGTCGATGGGCAAAGTATT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMQLHPM*VDGQSI
Trigger: AATACTTTGCCCATCGACGCACATGGGATGCAGCTG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCGTATTGCAGTGTGCTaGCATCAGTCCAACGGAAGT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMRIAVC*HQSNGS
Trigger: ACTTCCGTTGGACTGATGGCAGCACACTGCAATACG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCGTATTGCAGTGTGCTaGCATCAGTCCAACGGAAGT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQRIAVC*HQSNGS
Trigger: ACTTCCGTTGGACTGATGGCAGCACACTGCAATACG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTCTCGTATTGCAGTGTaGTGCCATCAGTCCAACGGA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMSRIAV*CHQSNG
Trigger: TCCGTTGGACTGATGGCAGCACACTGCAATACGAGA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCAGCGCCTCGACTCCTaGCACCTCCGGCTCCAACGA +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCQRLDS*HLRLQR
Trigger: TCGTTGGAGCCGGAGGTGGCAGGAGTCGAGGCGCTG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATTGCGTCCGCACGCCTaGAGTTCTTCCCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPLRPHA*SSSPER
Trigger: CCTTTCTGGGGAAGAACTCCAGGCGTGCGGACGCAA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTGGGAGGATGCGGGGCTaGCCGAAGATCTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISGRMRG*PKILVP
Trigger: TGGGACCAAGATCTTCGGCCAGCCCCGCATCCTCCC...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCGGCTTATTGCAGTTTaGGGGGAAAATTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLRLIAV*GENSLQ
Trigger: CTGCAGTGAATTTTCCCCCCAAACTGCAATAAGCCG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTGCGGAGAAATTCACTaGTGTTGTAACTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLCGEIH*CCNWVA
Trigger: TGCCACCCAGTTACAACACCAGTGAATTTCTCCGCA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACATAACAGCCTACTCTaGGAGCCCGGATGGGATATC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEHNSLL*EPGWDI
Trigger: GATATCCCATCCGGGCTCCCAGAGTAGGCTGTTATG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACTGGGGACAGTGAGGTaGAACACATCACCATCCAGA +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASELGTVR*NTSPSR
Trigger: TCTGGATGGTGATGTGTTCCACCTCACTGTCCCCAG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACCACTGTTGCCAGCCTaGCATCCTGGTTTTCACACT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEPLLPA*HPGFHT
Trigger: AGTGTGAAAACCAGGATGCCAGGCTGGCAACAGTGG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GCCTCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGAGACCACCTCCACACTaGGCCCTGGCCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: ASVGLGIVTPINKLQNLRRPPPH*ALATVT
Trigger: TGTGACTGTGGCCAGGGCCCAGTGTGGAGGTGGTCT...CCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGAAGGGGAAACAGTTGTaGATGCTGAGACTGACTCCA +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLKGKQL*MLRLTP
Trigger: TGGAGTCAGTCTCAGCATCCACAACTGTTTCCCCTT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCTCTTGTTCATCCAGTaGTGTTACTGCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQLLFIQ*CYCLLG
Trigger: CCCAAGGAGGCAGTAACACCACTGGATGAACAAGAG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCTCTTGTTCATCCAGTaGTGTTACTGCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMLLFIQ*CYCLLG
Trigger: CCCAAGGAGGCAGTAACACCACTGGATGAACAAGAG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCTCAGTTACAGCACCTaGTGGATAAGACACACTGTG +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLLSYST*WIRHTV
Trigger: CACAGTGTGTCTTATCCACCAGGTGCTGTAACTGAG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCCTGTCGATGAGAGGTaGTTTCTTAGTGATCGCGGA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMPVDER*FLSDRG
Trigger: TCCGCGATCACTAAGAAACCACCTCTCATCGACAGG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTGCTTGCTGGGGGCTGTaGCGTAGAAAGCGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISACWGL*RRKRLR
Trigger: CCTCAGGCGCTTTCTACGCCACAGCCCCCAGCAAGC...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGAAATTTTGTGCTTGCTaGGGGCTGTGGCGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLKFCAC*GLWRRK
Trigger: CTTTCTACGCCACAGCCCCCAGCAAGCACAAAATTT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGATGAAGAAACAGTGGTaGTTTCTGGGTCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQMKKQW*FLGRQQ
Trigger: CTGCTGCCGACCCAGAAACCACCACTGTTTCTTCAT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAGCACTGGGAAGCACTaGAACAACAGAGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASESTGKH*NNRAAD
Trigger: GTCAGCAGCTCTGTTGTTCCAGTGCTTCCCAGTGCT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTGTGGTCTACTAGTCTaGATTTCTTCTGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLCGLLV*ISSAHL
Trigger: CAGGTGGGCAGAAGAAATCCAGACTAGTAGACCACA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGAGCAGAAGTAGAGTGTaGCCACTGTGTAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMSRSRV*PLCSTF
Trigger: GAAGGTGCTACACAGTGGCCACACTCTACTTCTGCT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAAGAAGCTGTCTGGCTaGTTGGGTCTCCAATTCTCG +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQKKLSG*LGLQFS
Trigger: CGAGAATTGGAGACCCAACCAGCCAGACAGCTTCTT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATCTACAACAGGGGGCTaGCCGCAAGCGACTGTTCCT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPSTTGG*PQATVP
Trigger: AGGAACAGTCGCTTGCGGCCAGCCCCCTGTTGTAGA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACTTCAATCCCGTACATaGCGTCACAGCGGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASELQSRT*RHSGKD
Trigger: GTCTTTACCGCTGTGACGTCATGTACGGGATTGAAG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GCACAGTTACAGCTTAACCTGATATTTCCTCACCCCTCTAAAAATCCATTTGCCGCTCTGGAGTTGCTATaGCTGCCCCAACGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: AQLQLNLIFPHPSKNPFAALELL*LPQRPN
Trigger: GTTTGGACGTTGGGGCAGTCATAGCAACTCCAGAGC...GGCAAATGGATTTTTAGAGGGGTGAGGAAATATCAGGTTAAGCTGTAACTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCACGACACCATCCCATaGATCCGTAGCATAATGAGA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMHDTIP*IRSIMR
Trigger: TCTCATTATGCTACGGATTCATGGGATGGTGTCGTG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCACGACACCATCCCATaGATCCGTAGCATAATGAGA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQHDTIP*IRSIMR
Trigger: TCTCATTATGCTACGGATTCATGGGATGGTGTCGTG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCCTCTTCTCCCAAGGTaGATCCATAGTGACCTGTGG +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISPLLPR*IHSDLW
Trigger: CCACAGGTCACTATGGATTCACCTTGGGAGAAGAGG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGGCGAGTCTGATCAATaGCAAGTATGTCTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMGESDQ*QVCLER
Trigger: CCTCTCAAGACATACTTGTCATTGATCAGACTCGCC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGCTTCAAGGCGAGTCTaGTCAATGACAAGTATGTCT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLASRRV*SMTSMS
Trigger: AGACATACTTGTCATTGATCAGACTCGCCTTGAAGC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGTGAAGTCTGTCTACTaGACTGAAGGCAGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLVKSVY*TEGSGN
Trigger: ATTACCACTGCCTTCAGTTCAGTAGACAGACTTCAC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTCGCGGAAGATGGCTTaGATGCTGAAGTTGTGTGAA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMSRKMA*MLKLCE
Trigger: TTCACACAACTTCAGCATTCAAGCCATCTTCCGCGA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGAATCGAAGAACTCCCTaGGAGCTCTACAACTTGTCT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLNRRTP*ELYNLS
Trigger: AGACAAGTTGTAGAGCTCTCAGGGAGTTCTTCGATT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACAGGGATCCCAGTTGTaGAGTGAAAGCCCATGTGAT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEQGSQL*SESPCD
Trigger: ATCACATGGGCTTTCACTTCACAACTGGGATCCCTG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGGAGATGATGGTGTCTaGGAAGACAACTTCGCAAAT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLGDDGV*EDNFAN
Trigger: ATTTGCGAAGTTGTCTTCTCAGACACCATCATCTCC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGATAGTGAGGGGAGATaGTGGTGTCTGAGAAGACAA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQDSEGR*WCLRRQ
Trigger: TTGTCTTCTCAGACACCATCATCTCCCCTCACTATC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGAGGCTTCACTGCCTaGGTAGATAGTGAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISRGFTA*VDSEGR
Trigger: TCTCCCCTCACTATCTACTCAGGCAGTGAAGCCTCT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGGAGGCTCAGTTATGTaGAGGTATTCCTCACTTGAT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLGGSVM*RYSSLD
Trigger: ATCAAGTGAGGAATACCTTCACATAACTGAGCCTCC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTGCCGTGCCTTCCACTaGCTCTTCATTAATGCCAAT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMCRAFH*LFINAN
Trigger: ATTGGCATTAATGAAGAGTCAGTGGAAGGCACGGCA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGAAGGTGACGTTGAATaGAACCATCTTTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLEGDVE*NHLCSG
Trigger: ACCACTGCAAAGATGGTTTCATTCAACGTCACCTTC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGCAACCCAAAATGACTaGACGGTGGTCCAAAAATCC +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQATQND*TVVQKS
Trigger: GGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACACGGCAACCCAAAATaGCTGAACGGTGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEHGNPK*LNGGPK
Trigger: TTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAATGTTCTCGGCTGTTaGGTCCGCACGCCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPNVLGC*VRTPGV
Trigger: AACTCCAGGCGTGCGGACGCAACAGCCGAGAACATT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAGACCCGCATCACTTaGCAGCAGCTTGACCACAGT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISKTRIT*QQLDHS
Trigger: ACTGTGGTCAAGCTGCTGGCAAGTGATGCGGGTCTT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAATTCAGTGTGTACCTaGTGGTTGCCGCCCTGTAGT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASENSVCT*WLPPCS
Trigger: ACTACAGGGCGGCAACCAGCAGGTACACACTGAATT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATGGAGTTGCTATGACTaGCCCAACGTCCAAACAAGC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEWSCYD*PNVQTS
Trigger: GCTTGTTTGGACGTTGGGGCAGTCATAGCAACTCCA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GCCTCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGGAGTTCCCCCACTGTTaGCAGCCTGGCATCCTGGTT +
Preference number: 4 (lower is better)
Translates to: ASVGLGIVTPINKLQNLREFPHC*QPGILV
Trigger: AACCAGGATGCCAGGCTGGCAACAGTGGGGGAACTC...CCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACAGGGTGAAATTTTGTaGTTGCTGGGGGCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPQGEIL*LLGAVA
Trigger: CGCCACAGCCCCCAGCAAGCACAAAATTTCACCCTG...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTTCCCATTTATGTACTaGACAGATGGGGTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLFPFMY*TDGVVV
Trigger: GACAACCACCCCATCTGTGCAGTACATAAATGGGAA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGGTGTCCCTAAATGCTaGATCTCCAGAGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEGVPKC*ISRAFH
Trigger: ATGGAAGGCTCTGGAGATGCAGCATTTAGGGACACC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCTGGGTGTCCCTAAATaGTGCATCTCCAGAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISLGVPK*CISRAF
Trigger: GAAGGCTCTGGAGATGCAGCATTTAGGGACACCCAG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTGGAGAAAGGGAGAGGTaGCACCGTGGGTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISGERER*HRGSFC
Trigger: GCAGAAGGACCCACGGTGGCACCTCTCCCTTTCTCC...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCCAAGGCACCACACCTaGCTCGACCCCATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCPRHHT*LDPIGG
Trigger: GCCACCTATGGGGTCGAGGCAGGTGTGGTGCCTTGG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGCTATCGTGGAATCCTaGCCTCTGATTAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQAIVES*PLIKAA
Trigger: AGCAGCTTTAATCAGAGGGCAGGATTCCACGATAGC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGATCCTGGCACACAGGTaGATACGTAGGAAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMILAHR*IRRKFQ
Trigger: CTGAAACTTCCTACGTATGCACCTGTGTGCCAGGAT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACAGCTGCATCCCATGTaGGTCGATGGGCAAAGTATT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEQLHPM*VDGQSI
Trigger: AATACTTTGCCCATCGACGCACATGGGATGCAGCTG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGCATTCCCGTTCAGCTaGATCCCATGTGCGTCGATG +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPAFPFS*IPCASM
Trigger: CATCGACGCACATGGGATGCAGCTGAACGGGAATGC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACGTATTGCAGTGTGCTaGCATCAGTCCAACGGAAGT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASERIAVC*HQSNGS
Trigger: ACTTCCGTTGGACTGATGGCAGCACACTGCAATACG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCGGCTTATTGCAGTTTaGGGGGAAAATTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQRLIAV*GENSLQ
Trigger: CTGCAGTGAATTTTCCCCCCAAACTGCAATAAGCCG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTGCGGAGAAATTCACTaGTGTTGTAACTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMCGEIH*CCNWVA
Trigger: TGCCACCCAGTTACAACACCAGTGAATTTCTCCGCA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GCCTCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGCAGCCTCGGGATGTGTaGGCACAGACACTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: ASVGLGIVTPINKLQNLRQPRDV*AQTLSL
Trigger: AAGGGAGAGTGTCTGTGCCCACACATCCCGAGGCTG...CCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGCAAAGAGCTGCTCTaGAGTTGCTATGACTGCCCC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISSKELL*SCYDCP
Trigger: GGGGCAGTCATAGCAACTCCAGAGCAGCTCTTTGCT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCTGGGGACAGTGAGGTaGAACACATCACCATCCAGA +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISLGTVR*NTSPSR
Trigger: TCTGGATGGTGATGTGTTCCACCTCACTGTCCCCAG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCCACTGTTGCCAGCCTaGCATCCTGGTTTTCACACT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISPLLPA*HPGFHT
Trigger: AGTGTGAAAACCAGGATGCCAGGCTGGCAACAGTGG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp CCATCTCAAAGAAACAGAGTGATACCGAAGACAAAATCAACAATCTTAAGGATTCTCCACACTGGGCCCTaGCCACAGTCACAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PSQRNRVIPKTKSTILRILHTGP*PQSQGG
Trigger: GCCACCCTGTGACTGTGGCCAGGGCCCAGTGTGGAG...AATCCTTAAGATTGTTGATTTTGTCTTCGGTATCACTCTGTTTCTTTGAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAGACCACCTCCACACTaGGCCCTGGCCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISRPPPH*ALATVT
Trigger: TGTGACTGTGGCCAGGGCCCAGTGTGGAGGTGGTCT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAAGGGGAAACAGTTGTaGATGCTGAGACTGACTCCA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQKGKQL*MLRLTP
Trigger: TGGAGTCAGTCTCAGCATCCACAACTGTTTCCCCTT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGGGAACAGTAGATACTaGCTTAGAGAGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMGNSRY*LREVHI
Trigger: GATGTGGACCTCTCTAAGCCAGTATCTACTGTTCCC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCTCCCCAGTCTGTCTTaGGAATTACAGAAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLLPSLS*ELQKEE
Trigger: TTCCTCTTTCTGTAATTCCCAAGACAGACTGGGGAG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCTCAGTTACAGCACCTaGTGGATAAGACACACTGTG +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMLSYST*WIRHTV
Trigger: CACAGTGTGTCTTATCCACCAGGTGCTGTAACTGAG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGAAATTTTGTGCTTGCTaGGGGCTGTGGCGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMKFCAC*GLWRRK
Trigger: CTTTCTACGCCACAGCCCCCAGCAAGCACAAAATTT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGCAACACTTTCAAACTaGCCACGCCTAGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEATLSN*PRLASA
Trigger: TGCAGAAGCTAGGCGTGGCCAGTTTGAAAGTGTTGC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAACAGTGGTGGTTTCTaGGTCGGCAGCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPNSGGF*VGSSFS
Trigger: GGAGAAGCTGCTGCCGACCCAGAAACCACCACTGTT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGAAAATGAAGAAACAGTaGTGGTTTCTGGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLKMKKQ*WFLGRQ
Trigger: CTGCCGACCCAGAAACCACCACTGTTTCTTCATTTT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGTAGATGGTGAAGTCTaGGTGTCCCTAAATGCTGCA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQVDGEV*VSLNAA
Trigger: TGCAGCATTTAGGGACACCCAGACTTCACCATCTAC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGACTTTTGCACAGCACTaGGAAGCACTGGAACAACAG +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMTFAQH*EALEQQ
Trigger: CTGTTGTTCCAGTGCTTCCCAGTGCTGTGCAAAAGT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTTCCTCCTTCTCTACTaGAGCTTTCGTACCTTCCAC +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMFLLLY*SFRTFH
Trigger: GTGGAAGGTACGAAAGCTCCAGTAGAGAAGGAGGAA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGTCTCCGCTGTATCCTaGCACACAGGTGCATACGTA +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISVSAVS*HTGAYV
Trigger: TACGTATGCACCTGTGTGCCAGGATACAGCGGAGAC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAAATCAAGTTCACACTaGTCTCCGCTGTATCCTGGC +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQKSSSH*SPLYPG
Trigger: GCCAGGATACAGCGGAGACCAGTGTGAACTTGATTT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGAAATCAAGTTCACACTaGTCTCCGCTGTATCCTGGC +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMKSSSH*SPLYPG
Trigger: GCCAGGATACAGCGGAGACCAGTGTGAACTTGATTT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGAGCTGTCTGGCTGGTTaGGTCTCCAATTCTCGTATT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMSCLAG*VSNSRI
Trigger: AATACGAGAATTGGAGACCCAACCAGCCAGACAGCT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAATGACAAGGTAGGCTaGCTTTTCCAGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISNDKVG*LFQRGS
Trigger: GCTCCCTCTCTGGAAAAGTCAGCCTACCTTGTCATT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GGATTTAACTCAGCCTCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCCCATCCACAGTCAGTaGCACCGTGTCTTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: GFNSASVGLGIVTPINKLPIHSQ*HRVLCV
Trigger: GACACACAAGACACGGTGTCACTGACTGTGGATGGG...CAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGAGGCTGAGTTAAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCTATCTGTGATAGCCTaGGGTTGGACTGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISLSVIA*GWTVAF
Trigger: GAAAGCCACAGTCCAACCTCAGGCTATCACAGATAG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTCCAAGTCTTCTAAATaGGTGTGGATGGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLSKSSK*VWMVSS
Trigger: AGAAGACACCATCCACACTCATTTAGAAGACTTGGA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATCATCCCCACAGTTGTaGGTAAGGCAGGGGGCAATT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPSSPQL*VRQGAI
Trigger: AATTGCCCCCTGCCTTACTCACAACTGTGGGGATGA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCTGCTCCATCTTCAGTaGAACTTGGGATGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLLLHLQ*NLGCLY
Trigger: ATAAAGACATCCCAAGTTTCACTGAAGATGGAGCAG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGATGACAAGTATGTCTTaGGAGGGTTCACCTAGAACT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLMTSMS*EGSPRT
Trigger: AGTTCTAGGTGAACCCTCTCAAGACATACTTGTCAT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGCTTCAAGGCGAGTCTaGTCAATGACAAGTATGTCT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQASRRV*SMTSMS
Trigger: AGACATACTTGTCATTGATCAGACTCGCCTTGAAGC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCAAGGGAATTCTTCCTaGGTTGTTCCCTCTGTGATT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMQGNSS*VVPSVI
Trigger: AATCACAGAGGGAACAACTCAGGAAGAATTCCCTTG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAGAGACTGTATATGCTaGTCCATCGCCCTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASERDCIC*SIALLF
Trigger: GAACAAGAGGGCGATGGATCAGCATATACAGTCTCT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGAGATGGCTTGAATGCTaGAGTTGTGTGAAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMRWLEC*SCVKSV
Trigger: GACAGACTTCACACAACTTCAGCATTCAAGCCATCT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTGTAGCAGGAGGACTTaGAGTCGTGAAATACTCTCT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQCSRRT*SREILS
Trigger: AGAGAGTATTTCACGACTTCAAGTCCTCCTGCTACA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGCAAAGGCTATTTTCTaGGATTCTTGGTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLAKAIF*DSWSMA
Trigger: TGCCATTGACCAAGAATCTCAGAAAATAGCCTTTGC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAGGTACTGTAGATGGTaGAGTCTGGGTGTCCCTAAA +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASERYCRW*SLGVPK
Trigger: TTTAGGGACACCCAGACTTCACCATCTACAGTACCT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGTGACTGATGTGAACTaGAGTAGGTACTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQVTDVN*SRYCRW
Trigger: CCATCTACAGTACCTACTTCAGTTCACATCAGTCAC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGCTACTGGGTCCTTCTaGGTCAGATATGTGACTGAT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEATGSF*VRYVTD
Trigger: ATCAGTCACATATCTGACTCAGAAGGACCCAGTAGC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTGGAAGGCTGAAGTGCTaGCCATGGTGCTACTGGGTC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISGRLKC*PWCYWV
Trigger: GACCCAGTAGCACCATGGTCAGCACTTCAGCCTTCC...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTTGAAACTGTGCCACTaGCCTTTACTTCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMLKLCH*PLLPPS
Trigger: AGAAGGAGGAAGTAAAGGTCAGTGGCACAGTTTCAA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAATCCTCGAATTCCCTaGAACGGTCTTGGAAACTAC +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQNPRIP*NGLGNY
Trigger: GTAGTTTCCAAGACCGTTTCAGGGAATTCGAGGATT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCAGTTAAAGAAAGGTTaGCAGCTGCCTCATAGATCT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLQLKKG*QLPHRS
Trigger: AGATCTATGAGGCAGCTGTCAACCTTTCTTTAACTG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTGGTCTGCAATAGCTTaGCCATCAGACAAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMWSAIA*PSDKVL
Trigger: AAGCACTTTGTCTGATGGTCAAGCTATTGCAGACCA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGACCTCTGTTACACTCTaGTCCATAAGGTGGGTAGTA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMTSVTL*SIRWVV
Trigger: TACTACCCACCTTATGGATCAGAGTGTAACAGAGGT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGGAGGCTCAGTTATGTaGAGGTATTCCTCACTTGAT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMGGSVM*RYSSLD
Trigger: ATCAAGTGAGGAATACCTTCACATAACTGAGCCTCC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGCTTCTCCAGAAACTTaGCCATCGGTTTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQASPET*PSVLFW
Trigger: CCAAAACAAAACCGATGGTCAAGTTTCTGGAGAAGC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTGGTGGGAAACATCTTaGTTGCTTCTCCAGAAACTT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLWWETS*LLLQKL
Trigger: AAGTTTCTGGAGAAGCAATCAAGATGTTTCCCACCA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTGCCACTTGCTGTTCTaGTGCTGCTATCGTGGAATC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISCHLLF*CCYRGI
Trigger: GATTCCACGATAGCAGCATCAGAACAGCAAGTGGCA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTCTTGCACGTATAGGTaGGATGGTAATTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQSCTYR*DGNCRE
Trigger: TTCCCTGCAATTACCATCTCACCTATACGTGCAAGA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGAAGGTGACGTTGAATaGAACCATCTTTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQEGDVE*NHLCSG
Trigger: ACCACTGCAAAGATGGTTTCATTCAACGTCACCTTC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCTCCGGCTCCAACGATaGTCATGTTTGGATGTATTT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQLRLQR*SCLDVF
Trigger: AAATACATCCAAACATGATCATCGTTGGAGCCGGAG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAACTGCACCTATGGCTaGGATAGGTGCAATGACCTA +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASENCTYG*DRCNDL
Trigger: TAGGTCATTGCACCTATCTCAGCCATAGGTGCAGTT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATGTGTACCTGCTGGTTaGCGCCCTGTAGTGAAACAC +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPCVPAG*RPVVKH
Trigger: GTGTTTCACTACAGGGCGGCAACCAGCAGGTACACA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAATTCAGTGTGTACCTaGTGGTTGCCGCCCTGTAGT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISNSVCT*WLPPCS
Trigger: ACTACAGGGCGGCAACCAGCAGGTACACACTGAATT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGATAAGTCCTGACTCCTaGCTTTCCCATCTTATCTCC +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMISPDS*LSHLIS
Trigger: GGAGATAAGATGGGAAAGGCAGGAGTCAGGACTTAT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCAAAGCCGTTCCTCCATaGCGCCTGGAGTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCKAVPP*RLEFPH
Trigger: GTGGGGGAACTCCAGGCGGCATGGAGGAACGGCTTT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp TCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTAAAGCCGTTCCTCCATaGCGCCTGGAGTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SVGLGIVTPINKLQNLRTKAVPP*RLEFPH
Trigger: GTGGGGGAACTCCAGGCGGCATGGAGGAACGGCTTT...AGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTGTAGTACCTGGAGTTaGTGTAAAGTCTTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLCSTWS*CKVFLH
Trigger: ATGGAGGAAGACTTTACAGCAACTCCAGGTACTACA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGACTTCCTTCCATGGTTaGATAAACTTGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLTSFHG*INLAFS
Trigger: ACTGAAGGCCAAGTTTATGCAACCATGGAAGGAAGT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAGGAACTGGTTTCTCTaGAGTCTGTTCTTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQRNWFL*SLFFPR
Trigger: CCTTGGAAAGAACAGACTGCAGAGAAACCAGTTCCT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTCTGTTTTCACTTTGTaGTCAGTTACAGCACCTGGT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLSVFTL*SVTAPG
Trigger: ACCAGGTGCTGTAACTGAGCACAAAGTGAAAACAGA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGATACTTTTGGCCCAATaGGTGGTGTTAGTGTTACCA +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLILLAQ*VVLVLP
Trigger: TGGTAACACTAACACCACGCATTGGGCCAAAAGTAT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGACAGTGGTAACGAGATaGTTCCCATTTATGTACTGC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLTVVTR*FPFMYC
Trigger: GCAGTACATAAATGGGAAGCATCTCGTTACCACTGT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCATGCGGAGACAAAGTaGCAGCTACTTCCTTTTCGG +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISHAETK*QLLPFR
Trigger: CCGAAAAGGAAGTAGCTGGCACTTTGTCTCCGCATG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGGAGAAAGGGAGAGGTaGCACCGTGGGTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCGERER*HRGSFC
Trigger: GCAGAAGGACCCACGGTGGCACCTCTCCCTTTCTCC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGAGAAAGGTTGACAGCTaGCTCATAGATCTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLRKVDS*LIDLLN
Trigger: GTTCAAGAGATCTATGAGGCAGCTGTCAACCTTTCT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAATCCTGGCACACAGGTaGATACGTAGGAAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEILAHR*IRRKFQ
Trigger: CTGAAACTTCCTACGTATGCACCTGTGTGCCAGGAT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCAGCTGCATCCCATGTaGGTCGATGGGCAAAGTATT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISQLHPM*VDGQSI
Trigger: AATACTTTGCCCATCGACGCACATGGGATGCAGCTG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCGTATTGCAGTGTGCTaGCATCAGTCCAACGGAAGT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISRIAVC*HQSNGS
Trigger: ACTTCCGTTGGACTGATGGCAGCACACTGCAATACG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCACTGGCCATTCTCATaGCAAATGATTACAACACAG +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLHWPFS*QMITTQ
Trigger: CTGTGTTGTAATCATTTGGCATGAGAATGGCCAGTG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTCGGGGCAGCTCGCCTaGAAGTTCAAATGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISSGQLA*KFKCGL
Trigger: CAACCCGCATTTGAACTTGCAGGCGAGCTGCCCCGA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGGCACGGGTTCATTTTaGAGCGATCAGGTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPGTGSF*SDQVLS
Trigger: AGACAGGACCTGATCGCTGCAAAATGAACCCGTGCC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTCAGCCTCGGGATGTGTaGGCACAGACACTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISQPRDV*AQTLSL
Trigger: AAGGGAGAGTGTCTGTGCCCACACATCCCGAGGCTG...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATCAGTGTGTACCTGCTaGTTGCCGCCCTGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPSVCTC*LPPCSE
Trigger: TTCACTACAGGGCGGCAACCAGCAGGTACACACTGA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAGCAAAGAGCTGCTCTaGAGTTGCTATGACTGCCCC +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPSKELL*SCYDCP
Trigger: GGGGCAGTCATAGCAACTCCAGAGCAGCTCTTTGCT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCAGACCACCTCCACACTaGGCCCTGGCCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCRPPPH*ALATVT
Trigger: TGTGACTGTGGCCAGGGCCCAGTGTGGAGGTGGTCT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGGAGGGAAGCCTGTCTaGTTCTCAAAACGATACAGG +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISGGKPV*FSKRYR
Trigger: CCTGTATCGTTTTGAGAACCAGACAGGCTTCCCTCC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCCATTTGTGGTTCTTTaGATAAACTGGGTGATGCAG +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLPFVVL*INWVMQ
Trigger: CTGCATCACCCAGTTTATCCAAAGAACCACAAATGG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAAGGGGAAACAGTTGTaGATGCTGAGACTGACTCCA +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEKGKQL*MLRLTP
Trigger: TGGAGTCAGTCTCAGCATCCACAACTGTTTCCCCTT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGGGAACAGTAGATACTaGCTTAGAGAGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEGNSRY*LREVHI
Trigger: GATGTGGACCTCTCTAAGCCAGTATCTACTGTTCCC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGAAGTGTGTGCAAATTaGGGAACAGTAGATACTGGC +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMEVCAN*GTVDTG
Trigger: GCCAGTATCTACTGTTCCCCAATTTGCACACACTTC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCCTGTCGATGAGAGGTaGTTTCTTAGTGATCGCGGA +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISPVDER*FLSDRG
Trigger: TCCGCGATCACTAAGAAACCACCTCTCATCGACAGG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGAGATTCTTGGTCAATaGCAATCTCTCCTGAAGACT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLEILGQ*QSLLKT
Trigger: AGTCTTCAGGAGAGATTGCCATTGACCAAGAATCTC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATACTGCTGTGCTCAGTaGTCTGTGCCCCCAAATTTT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEYCCAQ*SVPPNF
Trigger: AAAATTTGGGGGCACAGACCACTGAGCACAGCAGTA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATGAAGAAACAGTGGTaGTTTCTGGGTCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISMKKQW*FLGRQQ
Trigger: CTGCTGCCGACCCAGAAACCACCACTGTTTCTTCAT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACTTTTGCACAGCACTaGGAAGCACTGGAACAACAG +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASETFAQH*EALEQQ
Trigger: CTGTTGTTCCAGTGCTTCCCAGTGCTGTGCAAAAGT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCAAGCCATTTGCATCTaGATCTGGAGTAGACATGTT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLQAICI*IWSRHV
Trigger: AACATGTCTACTCCAGATCCAGATGCAAATGGCTTG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAACAGCTTTAGCGCTTaGCACCTCAGGATGTTTTTC +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQNSFSA*HLRMFF
Trigger: GAAAAACATCCTGAGGTGCCAAGCGCTAAAGCTGTT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGGAAACTACCGTCTGTaGACCTCTCATATGACACTG +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEGNYRL*TSHMTL
Trigger: CAGTGTCATATGAGAGGTCCACAGACGGTAGTTTCC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTTCCTGGCAGAGCACTaGGCTGGGGGATCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISFLAEH*AGGSLC
Trigger: ACACAGAGATCCCCCAGCCCAGTGCTCTGCCAGGAA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGCAGAAGTAGAGTGTaGCCACTGTGTAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISSRSRV*PLCSTF
Trigger: GAAGGTGCTACACAGTGGCCACACTCTACTTCTGCT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCTGTTGCCTGATCATTaGAATCAAGAATTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLLLPDH*NQEFSL
Trigger: CAGCGAGAATTCTTGATTCCAATGATCAGGCAACAG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAGCTGTCTGGCTGGTTaGGTCTCCAATTCTCGTATT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASESCLAG*VSNSRI
Trigger: AATACGAGAATTGGAGACCCAACCAGCCAGACAGCT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAGAAGCTGTCTGGCTaGTTGGGTCTCCAATTCTCG +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISKKLSG*LGLQFS
Trigger: CGAGAATTGGAGACCCAACCAGCCAGACAGCTTCTT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTCTACAACAGGGGGCTaGCCGCAAGCGACTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISSTTGG*PQATVP
Trigger: AGGAACAGTCGCTTGCGGCCAGCCCCCTGTTGTAGA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAATGACAAGGTAGGCTaGCTTTTCCAGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPNDKVG*LFQRGS
Trigger: GCTCCCTCTCTGGAAAAGTCAGCCTACCTTGTCATT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAGTCCTGACCAATCTTaGTATTTCCATTTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQSPDQS*YFHFGP
Trigger: TGGCCCAAAATGGAAATATCAAGATTGGTCAGGACT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GCACAGTTACAGCTTAACCTGATATTTCCTCACCCCTCTAAAAATCCATTTGCCCTTCAATCCCGTACATaGCGTCACAGCGGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: AQLQLNLIFPHPSKNPFALQSRT*RHSGKD
Trigger: GTCTTTACCGCTGTGACGTCATGTACGGGATTGAAG...GGCAAATGGATTTTTAGAGGGGTGAGGAAATATCAGGTTAAGCTGTAACTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATCCAAACAAGCCTTCTaGGCAGCCTCAAAATTCAGT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASESKQAF*AASKFS
Trigger: ACTGAATTTTGAGGCTGCTCAGAAGGCTTGTTTGGA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTGCTCTGGAGTTGCTATaGCTGCCCCAACGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISALELL*LPQRPN
Trigger: GTTTGGACGTTGGGGCAGTCATAGCAACTCCAGAGC...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGGAACTCTGTTGGAATaGCAGGTAATTCATCAACTA +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLGTLLE*QVIHQL
Trigger: TAGTTGATGAATTACCTGTCATTCCAACAGAGTTCC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTCCAAGTCTTCTAAATaGGTGTGGATGGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQSKSSK*VWMVSS
Trigger: AGAAGACACCATCCACACTCATTTAGAAGACTTGGA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGAAGACTCTGTAACATaGATTGGCTCTGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMEDSVT*IGSERD
Trigger: ATCTCTCTCAGAGCCAATTCATGTTACAGAGTCTTC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGAAGACTCTGTAACATaGATTGGCTCTGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQEDSVT*IGSERD
Trigger: ATCTCTCTCAGAGCCAATTCATGTTACAGAGTCTTC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCTGCTCCATCTTCAGTaGAACTTGGGATGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQLLHLQ*NLGCLY
Trigger: ATAAAGACATCCCAAGTTTCACTGAAGATGGAGCAG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGGCGAGTCTGATCAATaGCAAGTATGTCTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISGESDQ*QVCLER
Trigger: CCTCTCAAGACATACTTGTCATTGATCAGACTCGCC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGAGACTGTATATGCTaGTCCATCGCCCTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISRDCIC*SIALLF
Trigger: GAACAAGAGGGCGATGGATCAGCATATACAGTCTCT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGTGAAGTCTGTCTACTaGACTGAAGGCAGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEVKSVY*TEGSGN
Trigger: ATTACCACTGCCTTCAGTTCAGTAGACAGACTTCAC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACTGTCCGAGAAATTCTaGGAAGGTGCAACACTTTCA +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASELSEKF*EGATLS
Trigger: TGAAAGTGTTGCACCTTCTCAGAATTTCTCGGACAG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGCAAAGGCTATTTTCTaGGATTCTTGGTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQAKAIF*DSWSMA
Trigger: TGCCATTGACCAAGAATCTCAGAAAATAGCCTTTGC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTCTTTTGCTATGGGATaGGACACTGTTGAGTATTCT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLSFAMG*DTVEYS
Trigger: AGAATACTCAACAGTGTCTCATCCCATAGCAAAAGA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGGTACTGTAGATGGTaGAGTCTGGGTGTCCCTAAA +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISRYCRW*SLGVPK
Trigger: TTTAGGGACACCCAGACTTCACCATCTACAGTACCT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTCAGTATCTGACTCTTaGATTGTTGGTCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMSVSDS*IVGLMP
Trigger: AGGCATGAGACCAACAATTCAAGAGTCAGATACTGA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGAGATGGTTTTGGTGCTaGTGTAACAAATTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLRWFWC*CNKFFG
Trigger: GCCAAAGAATTTGTTACATCAGCACCAAAACCATCT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACAGGGATCCCAGTTGTaGAGTGAAAGCCCATGTGAT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPQGSQL*SESPCD
Trigger: ATCACATGGGCTTTCACTTCACAACTGGGATCCCTG...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATGCCTCCTCAGCTCCTaGAGAGAATTCTGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPCLLSS*REFWLK
Trigger: TTTCAGCCAGAATTCTCTTCAGGAGCTGAGGAGGCA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGATAGTGAGGGGAGATaGTGGTGTCTGAGAAGACAA +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISDSEGR*WCLRRQ
Trigger: TTGTCTTCTCAGACACCATCATCTCCCCTCACTATC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCGACAGGGATTAGAGTaGCATTCATCAAAATCAAGT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLRQGLE*HSSKSS
Trigger: ACTTGATTTTGATGAATGTCACTCTAATCCCTGTCG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGAACATTTGTTCTTCGTaGGACAGGATGCTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMNICSS*DRMLVR
Trigger: TCTCACAAGCATCCTGTCTCACGAAGAACAAATGTT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCAAACATCTTGTCATTaGGGCCTATCCACTGATAAT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLQTSCH*GLSTDN
Trigger: ATTATCAGTGGATAGGCCTCAATGACAAGATGTTTG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACACGGCAACCCAAAATaGCTGAACGGTGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPHGNPK*LNGGPK
Trigger: TTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTG...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCAGTCAAAGAGCAAGTaGAACCATTTCCAGCCTAAA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQQSKSK*NHFQPK
Trigger: TTTAGGCTGGAAATGGTTTCACTTGCTCTTTGACTG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGAGGTCTATATCCGTATaGAATGCATTGATCGGTAAC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLRSISV*NALIGN
Trigger: GTTACCGATCAATGCATTTCATACGGATATAGACCT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp TCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTAATTCACTGCAGCGCTaGGCGACTGGGTTCGGCGTT +
Preference number: 4 (lower is better)
Translates to: SVGLGIVTPINKLQNLRTNSLQR*ATGFGV
Trigger: AACGCCGAACCCAGTCGCGCAGCGCTGCAGTGAATT...AGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR GCA 90 bp GCACAGTTACAGCTTAACCTGATATTTCCTCACCCCTCTAAAAATCCATTTGCCAATTCAGTGTGTACCTaGTGGTTGCCGCCCTGTAGT +
Preference number: 4 (lower is better)
Translates to: AQLQLNLIFPHPSKNPFANSVCT*WLPPCS
Trigger: ACTACAGGGCGGCAACCAGCAGGTACACACTGAATT...GGCAAATGGATTTTTAGAGGGGTGAGGAAATATCAGGTTAAGCTGTAACTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR GCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTGAGCTGCTCTGGAGTTaGTATGACTGCCCCAACGTC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISELLWS*YDCPNV
Trigger: GACGTTGGGGCAGTCATAGCAACTCCAGAGCAGCTC...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGAGTTCCCCCACTGTTaGCAGCCTGGCATCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCEFPHC*QPGILV
Trigger: AACCAGGATGCCAGGCTGGCAACAGTGGGGGAACTC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTCTGTTTTCACTTTGTaGTCAGTTACAGCACCTGGT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMSVFTL*SVTAPG
Trigger: ACCAGGTGCTGTAACTGAGCACAAAGTGAAAACAGA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTCTGTTTTCACTTTGTaGTCAGTTACAGCACCTGGT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQSVFTL*SVTAPG
Trigger: ACCAGGTGCTGTAACTGAGCACAAAGTGAAAACAGA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGATACTTTTGGCCCAATaGGTGGTGTTAGTGTTACCA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQILLAQ*VVLVLP
Trigger: TGGTAACACTAACACCACGCATTGGGCCAAAAGTAT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGTAGATTCATTAGGTTaGACAGCAGTAGACAATTCC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLVDSLG*TAVDNS
Trigger: GGAATTGTCTACTGCTGTGCAACCTAATGAATCTAC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTTCAGTATGTTCATGTaGCTGATGACCAACTTCAGT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLFSMFM*LMTNFS
Trigger: ACTGAAGTTGGTCATCAGGCACATGAACATACTGAA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAATGTAGTTTCCACATaGGGAGACAAAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASENVVST*GDKVPA
Trigger: AGCTGGCACTTTGTCTCCGCATGTGGAAACTACATT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTACCGTTTCTTCTTTTaGTATGGGATGAGACACTGT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLYRFFF*YGMRHC
Trigger: ACAGTGTCTCATCCCATAGCAAAAGAAGAAACGGTA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGGTGTCCCTAAATGCTaGATCTCCAGAGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPGVPKC*ISRAFH
Trigger: ATGGAAGGCTCTGGAGATGCAGCATTTAGGGACACC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGTACCAGAAAACTTTTaGACAGCACTGGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEVPENF*TALGST
Trigger: AGTGCTTCCCAGTGCTGTGCAAAAGTTTTCTGGTAC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGTCATCCAGGGCTTTTaGTTCAGCTTTTATTCCTTC +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMVIQGF*FSFYSF
Trigger: GAAGGAATAAAAGCTGAAGCAAAAGCCCTGGATGAC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGTGAGATGGGCACCCTaGAGACGGCATTCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCVRWAP*RRHSRS
Trigger: TGAACGGGAATGCCGTCTGCAGGGTGCCCATCTCAC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCACTGGCCATTCTCATaGCAAATGATTACAACACAG +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQHWPFS*QMITTQ
Trigger: CTGTGTTGTAATCATTTGGCATGAGAATGGCCAGTG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGATAAGTCCTTTGGTATaGAGATGGGTTCATGCAGGT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMISPLV*RWVHAG
Trigger: ACCTGCATGAACCCATCTGCATACCAAAGGACTTAT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGGAGCCCCTCACCGGTaGGCTTTTTCCCACTTTGAC +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCGAPHR*AFSHFD
Trigger: GTCAAAGTGGGAAAAAGCCCACCGGTGAGGGGCTCC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCAGCCTCGGGATGTGTaGGCACAGACACTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCQPRDV*AQTLSL
Trigger: AAGGGAGAGTGTCTGTGCCCACACATCCCGAGGCTG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGATTTAACTCAGCCTCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGTCAGTGTGTACCTGCTaGTTGCCGCCCTGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: GFNSASVGLGIVTPINKLSVCTC*LPPCSE
Trigger: TTCACTACAGGGCGGCAACCAGCAGGTACACACTGA...CAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGAGGCTGAGTTAAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp GCCTCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGAGCAAAGAGCTGCTCTaGAGTTGCTATGACTGCCCC +
Preference number: 4 (lower is better)
Translates to: ASVGLGIVTPINKLQNLRSKELL*SCYDCP
Trigger: GGGGCAGTCATAGCAACTCCAGAGCAGCTCTTTGCT...CCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp GCCTCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGCCACTGTTGCCAGCCTaGCATCCTGGTTTTCACACT +
Preference number: 4 (lower is better)
Translates to: ASVGLGIVTPINKLQNLRPLLPA*HPGFHT
Trigger: AGTGTGAAAACCAGGATGCCAGGCTGGCAACAGTGG...CCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGGAGGGAAGCCTGTCTaGTTCTCAAAACGATACAGG +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPGGKPV*FSKRYR
Trigger: CCTGTATCGTTTTGAGAACCAGACAGGCTTCCCTCC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGTTCTTTGGATAAACTaGGTGATGCAGTTTCTGCGA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMVLWIN*VMQFLR
Trigger: TCGCAGAAACTGCATCACCCAGTTTATCCAAAGAAC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGACGCCAGTTGTACTCTaGAGCACTTCTTCCTTAATT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMTPVVL*STSSLI
Trigger: AATTAAGGAAGAAGTGCTCCAGAGTACAACTGGCGT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGATCCATAGTGACCTGTaGTTACCAATTCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLIHSDL*LPIQKQ
Trigger: CTGTTTCTGAATTGGTAACCACAGGTCACTATGGAT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACTGAGAGCAGGAACTaGTTTCTCTGCAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISTESRN*FLCSLF
Trigger: GAACAGACTGCAGAGAAACCAGTTCCTGCTCTCAGT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAGTTACAGCACCTGGTaGATAAGACACACTGTGATC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASESYSTW*IRHTVI
Trigger: GATCACAGTGTGTCTTATCCACCAGGTGCTGTAACT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAGCTTCTGCAGCTTCTaGGTCCTTGGGCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISSFCSF*VLGHSG
Trigger: ACCACTGTGCCCAAGGACCCAGAAGCTGCAGAAGCT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACATGGAATGGGACTGTaGGGAAAACATCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPHGMGL*GKHQAH
Trigger: GTGAGCCTGATGTTTTCCCCACAGTCCCATTCCATG...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCTTTCAAATTCCTCATaGAATGGGACTGTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMLSNSS*NGTVGK
Trigger: TTTCCCCACAGTCCCATTCCATGAGGAATTTGAAAG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGAGATTCTTGGTCAATaGCAATCTCTCCTGAAGACT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQEILGQ*QSLLKT
Trigger: AGTCTTCAGGAGAGATTGCCATTGACCAAGAATCTC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCAGAAACTGGATAAATaGTGGTTGCAGGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQQKLDK*WLQEPQ
Trigger: TTGAGGTTCCTGCAACCACCATTTATCCAGTTTCTG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGACTACGTGGGAGAGTaGTCAGCCCTTCCTGAACCC +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCDYVGE*SALPEP
Trigger: GGGTTCAGGAAGGGCTGACCACTCTCCCACGTAGTC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCAGAGGCAGGACTACGTaGGAGAGTGGTCAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCRGRTT*ESGQPF
Trigger: GAAGGGCTGACCACTCTCCCACGTAGTCCTGCCTCT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAAAATGAAGAAACAGTaGTGGTTTCTGGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEKMKKQ*WFLGRQ
Trigger: CTGCCGACCCAGAAACCACCACTGTTTCTTCATTTT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACAAAACCAGTCCTGTTaGCTCAGTGGAGAATGTAGT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEQNQSC*LSGECS
Trigger: ACTACATTCTCCACTGAGCCAACAGGACTGGTTTTG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCAAGCCATTTGCATCTaGATCTGGAGTAGACATGTT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQQAICI*IWSRHV
Trigger: AACATGTCTACTCCAGATCCAGATGCAAATGGCTTG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTGTGGTCTACTAGTCTaGATTTCTTCTGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISCGLLV*ISSAHL
Trigger: CAGGTGGGCAGAAGAAATCCAGACTAGTAGACCACA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATCCCTGAAACGGTCTTaGAAACTACCGTCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPSLKRS*KLPSVD
Trigger: GTCCACAGACGGTAGTTTCCAAGACCGTTTCAGGGA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGCAGGGATGTTGCCGTaGGAAGTAAAACGTCTAATT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEAGMLP*EVKRLI
Trigger: AATTAGACGTTTTACTTCCCACGGCAACATCCCTGC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTGTATCAGTGTAATATaGGGGATTGGATCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLCISVI*GIGSFH
Trigger: ATGGAAGGATCCAATCCCCCATATTACACTGATACA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCTTCCTGGCAGAGCACTaGGCTGGGGGATCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCFLAEH*AGGSLC
Trigger: ACACAGAGATCCCCCAGCCCAGTGCTCTGCCAGGAA...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTTCAGGGTTTATTTCTaGAGAAGAAGAAAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMFRVYF*RRRKRG
Trigger: CCCACGCTTTCTTCTTCTCCAGAAATAAACCCTGAA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAATCAAGTTCACACTaGTCTCCGCTGTATCCTGGC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISKSSSH*SPLYPG
Trigger: GCCAGGATACAGCGGAGACCAGTGTGAACTTGATTT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGCTGTCTGGCTGGTTaGGTCTCCAATTCTCGTATT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISSCLAG*VSNSRI
Trigger: AATACGAGAATTGGAGACCCAACCAGCCAGACAGCT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GACAAAATCAACAATCTTAAGGATTTAACTCAGCCTCAGTTGGCCTTGGCATTGAATGACAAGGTAGGCTaGCTTTTCCAGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: DKINNLKDLTQPQLALALNDKVG*LFQRGS
Trigger: GCTCCCTCTCTGGAAAAGTCAGCCTACCTTGTCATT...CAATGCCAAGGCCAACTGAGGCTGAGTTAAATCCTTAAGATTGTTGATTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTCCAAACAAGCCTTCTaGGCAGCCTCAAAATTCAGT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISSKQAF*AASKFS
Trigger: ACTGAATTTTGAGGCTGCTCAGAAGGCTTGTTTGGA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGGAACTCTGTTGGAATaGCAGGTAATTCATCAACTA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQGTLLE*QVIHQL
Trigger: TAGTTGATGAATTACCTGTCATTCCAACAGAGTTCC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACTTTCTGTTCAAAACTaGCAATATTTCCCACGGGAG +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASELSVQN*QYFPRE
Trigger: CTCCCGTGGGAAATATTGTCAGTTTTGAACAGAAAG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACCAGTCATCCATGGATaGTCCATTATTATCAGGCAT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEPVIHG*SIIIRH
Trigger: ATGCCTGATAATAATGGATCATCCATGGATGACTGG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATTCTGTACGATGCTGTaGTGGAAAAGGTGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEFCTML*WKRCSR
Trigger: TCTACTACACCTTTTCCATCACAGCATCGTACAGAA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAACATGAATTGGCTCTaGGAGAGATGTAGAGAGTTT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQNMNWL*ERCREF
Trigger: AAACTCTCTACATCTCTCTCAGAGCCAATTCATGTT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTTCTGCAATACCAGTTaGTGTAGTTGGCTGAAATCT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMFCNTS*CSWLKS
Trigger: AGATTTCAGCCAACTACATCAACTGGTATTGCAGAA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCAAGGGAATTCTTCCTaGGTTGTTCCCTCTGTGATT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISQGNSS*VVPSVI
Trigger: AATCACAGAGGGAACAACTCAGGAAGAATTCCCTTG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAGAGACTGTATATGCTaGTCCATCGCCCTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPRDCIC*SIALLF
Trigger: GAACAAGAGGGCGATGGATCAGCATATACAGTCTCT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGAGGACTTGAAGTCGTaGAATACTCTCTATCAATAT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLEDLKS*NTLYQY
Trigger: ATATTGATAGAGAGTATTTCACGACTTCAAGTCCTC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTGTAGCAGGAGGACTTaGAGTCGTGAAATACTCTCT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISCSRRT*SREILS
Trigger: AGAGAGTATTTCACGACTTCAAGTCCTCCTGCTACA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCTGTCCGAGAAATTCTaGGAAGGTGCAACACTTTCA +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISLSEKF*EGATLS
Trigger: TGAAAGTGTTGCACCTTCTCAGAATTTCTCGGACAG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGCTATTACAAATGGATaGGTATCACTTTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMAITNG*VSLSEL
Trigger: CAGCTCTGAAAGTGATACTCATCCATTTGTAATAGC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGCTATTACAAATGGATaGGTATCACTTTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQAITNG*VSLSEL
Trigger: CAGCTCTGAAAGTGATACTCATCCATTTGTAATAGC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAATCGAAGAACTCCCTaGGAGCTCTACAACTTGTCT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISNRRTP*ELYNLS
Trigger: AGACAAGTTGTAGAGCTCTCAGGGAGTTCTTCGATT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGACTTCCTTTTCGGCTTaGATTGCATACTCTACGTTT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQTSFSA*IAYSTF
Trigger: AAACGTAGAGTATGCAATTCAAGCCGAAAAGGAAGT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTCTTTTGCTATGGGATaGGACACTGTTGAGTATTCT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMSFAMG*DTVEYS
Trigger: AGAATACTCAACAGTGTCTCATCCCATAGCAAAAGA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTTGAAACTGTGCCACTaGCCTTTACTTCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISLKLCH*PLLPPS
Trigger: AGAAGGAGGAAGTAAAGGTCAGTGGCACAGTTTCAA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTTGGGGAAAGTTTGTTaGAACTGTGCCACTGACCTT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISLGKVC*NCATDL
Trigger: AAGGTCAGTGGCACAGTTTCAACAAACTTTCCCCAA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTGTTGTGCTGGTTACTaGCCCACTACCTTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISCCAGY*PTTFKD
Trigger: ATCTTTGAAGGTAGTGGGTCAGTAACCAGCACAACA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTTTCTTCTGCCCACCTaGCAGTCTGATTTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISFLLPT*QSDFED
Trigger: ATCCTCAAAATCAGACTGTCAGGTGGGCAGAAGAAA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGAAGAGAATTCTGGCTaGAAAGAAGGACCAGCATGT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISEENSG*KEGPAC
Trigger: ACATGCTGGTCCTTCTTTTCAGCCAGAATTCTCTTC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCCTCACTTGATGGTTTaGAAGTCGCTTCAATATTTA +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLPHLMV*KSLQYL
Trigger: TAAATATTGAAGCGACTTTCAAACCATCAAGTGAGG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCAAACATCTTGTCATTaGGGCCTATCCACTGATAAT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMQTSCH*GLSTDN
Trigger: ATTATCAGTGGATAGGCCTCAATGACAAGATGTTTG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTCTTGCACGTATAGGTaGGATGGTAATTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISSCTYR*DGNCRE
Trigger: TTCCCTGCAATTACCATCTCACCTATACGTGCAAGA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGAAGGTGACGTTGAATaGAACCATCTTTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISEGDVE*NHLCSG
Trigger: ACCACTGCAAAGATGGTTTCATTCAACGTCACCTTC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCTCCGGCTCCAACGATaGTCATGTTTGGATGTATTT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISLRLQR*SCLDVF
Trigger: AAATACATCCAAACATGATCATCGTTGGAGCCGGAG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACAGTCAAAGAGCAAGTaGAACCATTTCCAGCCTAAA +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEQSKSK*NHFQPK
Trigger: TTTAGGCTGGAAATGGTTTCACTTGCTCTTTGACTG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAACTGCACCTATGGCTaGGATAGGTGCAATGACCTA +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPNCTYG*DRCNDL
Trigger: TAGGTCATTGCACCTATCTCAGCCATAGGTGCAGTT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAGGTCTATATCCGTATaGAATGCATTGATCGGTAAC +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQRSISV*NALIGN
Trigger: GTTACCGATCAATGCATTTCATACGGATATAGACCT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTTCAAATGCGGGTTGTaGCACCCATCATCATTATAT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMFKCGL*HPSSLY
Trigger: ATATAATGATGATGGGTGTCACAACCCGCATTTGAA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCAATGTTCTCGGCTGTTaGGTCCGCACGCCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCNVLGC*VRTPGV
Trigger: AACTCCAGGCGTGCGGACGCAACAGCCGAGAACATT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTGCAAAGACCCGCATCACTTaGCAGCAGCTTGACCACAGT +
Preference number: 4 (lower is better)
Translates to: VGLGIVTPINKLQNLRTAKTRIT*QQLDHS
Trigger: ACTGTGGTCAAGCTGCTGGCAAGTGATGCGGGTCTT...TGCAGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATAAGTCCTGACTCCTaGCTTTCCCATCTTATCTCC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISISPDS*LSHLIS
Trigger: GGAGATAAGATGGGAAAGGCAGGAGTCAGGACTTAT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTTCCAGGATCATTCTTaGAGTTACCAATGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMFQDHS*SYQWCF
Trigger: GAAACACCATTGGTAACTGCAAGAATGATCCTGGAA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGAATTTTCCATGGGCTaGTATGTCTTCATCAGTAAC +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMEFSMG*YVFISN
Trigger: GTTACTGATGAAGACATAGCAGCCCATGGAAAATTC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTCAGCCATTAGATCATaGACTGGATCTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQSAIRS*TGSVSS
Trigger: TGAAGAAACAGATCCAGTGCATGATCTAATGGCTGA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCACATCAGTAGCATTTaGACACTCTTCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMHISSI*TLFFFF
Trigger: GAAGAAGAAGAAGAGTGTGCAAATGCTACTGATGTG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGGTAGGCACCACTTTTaGAGAAGGTTGTTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISGRHHF*RRLFRN
Trigger: GTTTCTGAACAACCTTCTGCAAAAGTGGTGCCTACC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAGATTCCAAGCCATTTaGATCTGGATCTGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASERFQAI*IWIWSR
Trigger: TCTACTCCAGATCCAGATGCAAATGGCTTGGAATCT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGAATTGTTGGTCTCATaGCTTTCGGAAAATGTTTTG +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLELLVS*LSENVL
Trigger: CAAAACATTTTCCGAAAGGCATGAGACCAACAATTC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACAGAAACAAATGTGGTaGTGCTTTCTTGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEQKQMW*CFLVWL
Trigger: CAACCAGACAAGAAAGCAGCACCACATTTGTTTCTG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAATTCTCGCTGCCACTTaGTGTTCTGATGCTGCTATC +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPILAAT*CSDAAI
Trigger: GATAGCAGCATCAGAACAGCAAGTGGCAGCGAGAAT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTGGCACGGGTTCATTTTaGAGCGATCAGGTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISGTGSF*SDQVLV
Trigger: TACCAGGACCTGATCGCTGCAAAATGAACCCGTGCC...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAATAAGTCCTTTGGTATaGAGATGGGTTCATGCAGGT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEISPLV*RWVHAG
Trigger: ACCTGCATGAACCCATCTGCATACCAAAGGACTTAT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACGGCTTATTGCAGTTTaGGGGGAAAATTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPRLIAV*GENSLQ
Trigger: CTGCAGTGAATTTTCCCCCCAAACTGCAATAAGCCG...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp CCATCTCAAAGAAACAGAGTGATACCGAAGACAAAATCAACAATCTTAAGGATTGGAGCCCCTCACCGGTaGGCTTTTTCCCACTTTGAC +
Preference number: 4 (lower is better)
Translates to: PSQRNRVIPKTKSTILRIGAPHR*AFSHFD
Trigger: GTCAAAGTGGGAAAAAGCCCACCGGTGAGGGGCTCC...AATCCTTAAGATTGTTGATTTTGTCTTCGGTATCACTCTGTTTCTTTGAGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATGCGGAGAAATTCACTaGTGTTGTAACTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPCGEIH*CCNWVA
Trigger: TGCCACCCAGTTACAACACCAGTGAATTTCTCCGCA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTCATAACAGCCTACTCTaGGAGCCCGGATGGGATATC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISHNSLL*EPGWDI
Trigger: GATATCCCATCCGGGCTCCCAGAGTAGGCTGTTATG...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTCTGGGGACAGTGAGGTaGAACACATCACCATCCAGA +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISLGTVR*NTSPSR
Trigger: TCTGGATGGTGATGTGTTCCACCTCACTGTCCCCAG...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTGCACTGGGGACAGTGAGGTaGAACACATCACCATCCAGA +
Preference number: 4 (lower is better)
Translates to: VGLGIVTPINKLQNLRTALGTVR*NTSPSR
Trigger: TCTGGATGGTGATGTGTTCCACCTCACTGTCCCCAG...TGCAGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp GCCTCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGGGAGGGAAGCCTGTCTaGTTCTCAAAACGATACAGG +
Preference number: 4 (lower is better)
Translates to: ASVGLGIVTPINKLQNLRGGKPV*FSKRYR
Trigger: CCTGTATCGTTTTGAGAACCAGACAGGCTTCCCTCC...CCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGTTCTTTGGATAAACTaGGTGATGCAGTTTCTGCGA +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEVLWIN*VMQFLR
Trigger: TCGCAGAAACTGCATCACCCAGTTTATCCAAAGAAC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGATCCATAGTGACCTGTaGTTACCAATTCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQIHSDL*LPIQKQ
Trigger: CTGTTTCTGAATTGGTAACCACAGGTCACTATGGAT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCTTCCCAGTCATCCATaGATGATCCATTATTATCAG +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQLPSHP*MIHYYQ
Trigger: CTGATAATAATGGATCATCCATGGATGACTGGGAAG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGACACTTAAAGTACCATaGGCCAAAAGCACTGTTGTA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQTLKVP*AKSTVV
Trigger: TACAACAGTGCTTTTGGCCCATGGTACTTTAAGTGT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGATTGTGAATTTTCCATaGGCTGCTATGTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLIVNFP*AAMSSS
Trigger: TGATGAAGACATAGCAGCCCATGGAAAATTCACAAT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGGGAACAGTAGATACTaGCTTAGAGAGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPGNSRY*LREVHI
Trigger: GATGTGGACCTCTCTAAGCCAGTATCTACTGTTCCC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCTCCCCAGTCTGTCTTaGGAATTACAGAAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISLPSLS*ELQKEE
Trigger: TTCCTCTTTCTGTAATTCCCAAGACAGACTGGGGAG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTGTCTTCCACAGTGGGTaGTCTTGTTGGCTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISVFHSG*SCWLCS
Trigger: GCTACACAGCCAACAAGACCACCCACTGTGGAAGAC...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAAATTTTGTGCTTGCTaGGGGCTGTGGCGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPKFCAC*GLWRRK
Trigger: CTTTCTACGCCACAGCCCCCAGCAAGCACAAAATTT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCAGCTTCTGCAGCTTCTaGGTCCTTGGGCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCSFCSF*VLGHSG
Trigger: ACCACTGTGCCCAAGGACCCAGAAGCTGCAGAAGCT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCCTTTCAGACTGTGTTaGTGTTGTCAAGGACATAAA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMPFRLC*CCQGHK
Trigger: TTTATGTCCTTGACAACACCAACACAGTCTGAAAGG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATACTGCTGTGCTCAGTaGTCTGTGCCCCCAAATTTT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPYCCAQ*SVPPNF
Trigger: AAAATTTGGGGGCACAGACCACTGAGCACAGCAGTA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATGTTTGAGATACGAGTaGTCCAACTTCTTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASECLRYE*SNFFCH
Trigger: GTGGCAAAAGAAGTTGGACCACTCGTATCTCAAACA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCTATTAATGTTGTGCTaGTTACTGACCCACTACCTT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQLLMLC*LLTHYL
Trigger: AAGGTAGTGGGTCAGTAACCAGCACAACATTAATAG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCTATTAATGTTGTGCTaGTTACTGACCCACTACCTT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMLLMLC*LLTHYL
Trigger: AAGGTAGTGGGTCAGTAACCAGCACAACATTAATAG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGATGTCCGATGTCCGTaGAGAAAGGGAGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCDVRCP*RKGEVP
Trigger: TGGCACCTCTCCCTTTCTCCACGGACATCGGACATC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGGAAACTACCGTCTGTaGACCTCTCATATGACACTG +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPGNYRL*TSHMTL
Trigger: CAGTGTCATATGAGAGGTCCACAGACGGTAGTTTCC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGCAGGGATGTTGCCGTaGGAAGTAAAACGTCTAATT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISAGMLP*EVKRLI
Trigger: AATTAGACGTTTTACTTCCCACGGCAACATCCCTGC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTGTATCAGTGTAATATaGGGGATTGGATCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMCISVI*GIGSFH
Trigger: ATGGAAGGATCCAATCCCCCATATTACACTGATACA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATTCAGGGTTTATTTCTaGAGAAGAAGAAAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEFRVYF*RRRKRG
Trigger: CCCACGCTTTCTTCTTCTCCAGAAATAAACCCTGAA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGAAAAGAAGCTGTCTaGCTGGTTGGGTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISRKEAV*LVGSPI
Trigger: AATTGGAGACCCAACCAGCCAGACAGCTTCTTTTCT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTGGTATGCAGATaGGTTCATGCAGGTAATTTT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQPLVCR*VHAGNF
Trigger: AAAATTACCTGCATGAACCCATCTGCATACCAAAGG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTCATTTAAAATGTTTTaGGAGCACGGCAACCCAAAA +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLSFKMF*EHGNPK
Trigger: TTTTGGGTTGCCGTGCTCCCAAAACATTTTAAATGA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGTATACATTAGGAAATaGACTGCACTGGAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMVYIRK*TALEAN
Trigger: ATTTGCCTCCAGTGCAGTCCATTTCCTAATGTATAC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp TGTGGCTCTGGACACAACAGAGCACAGTTACAGCTTAACCTGATATTTCCTCACAGCCTCAGTTGGCCTTaGCATTGTAACACCAATAAA +
Preference number: 4 (lower is better)
Translates to: CGSGHNRAQLQLNLIFPHSLSWP*HCNTNK
Trigger: TTTATTGGTGTTACAATGCCAAGGCCAACTGAGGCT...GTGAGGAAATATCAGGTTAAGCTGTAACTGTGCTCTGTTGTGTCCAGAGCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGGAACTCTGTTGGAATaGCAGGTAATTCATCAACTA +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEGTLLE*QVIHQL
Trigger: TAGTTGATGAATTACCTGTCATTCCAACAGAGTTCC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTCTATCTGTGATAGCCTaGGGTTGGACTGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISLSVIA*GWTVAF
Trigger: GAAAGCCACAGTCCAACCTCAGGCTATCACAGATAG...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCCTCTTCTCCCAAGGTaGATCCATAGTGACCTGTGG +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCPLLPR*IHSDLW
Trigger: CCACAGGTCACTATGGATTCACCTTGGGAGAAGAGG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTTCTGTACGATGCTGTaGTGGAAAAGGTGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISFCTML*WKRCSR
Trigger: TCTACTACACCTTTTCCATCACAGCATCGTACAGAA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAACATGAATTGGCTCTaGGAGAGATGTAGAGAGTTT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASENMNWL*ERCREF
Trigger: AAACTCTCTACATCTCTCTCAGAGCCAATTCATGTT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGAGGAACATGAGATGTTaGTTCTCCAATGATTACCAT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMRNMRC*FSNDYH
Trigger: ATGGTAATCATTGGAGAATCAACATCTCATGTTCCT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGTAGTGGGAGGAACATaGGATGTTGATTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPVVGGT*DVDSPM
Trigger: CATTGGAGAATCAACATCTCATGTTCCTCCCACTAC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGAGGACTTGAAGTCGTaGAATACTCTCTATCAATAT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMEDLKS*NTLYQY
Trigger: ATATTGATAGAGAGTATTTCACGACTTCAAGTCCTC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGAGGACTTGAAGTCGTaGAATACTCTCTATCAATAT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQEDLKS*NTLYQY
Trigger: ATATTGATAGAGAGTATTTCACGACTTCAAGTCCTC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGTTGCAGGAGAGTTTTaGGGGGATTCAAATGACTTT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISVAGEF*GDSNDF
Trigger: AAAGTCATTTGAATCCCCTCAAAACTCTCCTGCAAC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCAGTTAAAGAAAGGTTaGCAGCTGCCTCATAGATCT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISQLKKG*QLPHRS
Trigger: AGATCTATGAGGCAGCTGTCAACCTTTCTTTAACTG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATGGTCTGCAATAGCTTaGCCATCAGACAAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPWSAIA*PSDKVL
Trigger: AAGCACTTTGTCTGATGGTCAAGCTATTGCAGACCA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGAAGAGAATTCTGGCTaGAAAGAAGGACCAGCATGT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPEENSG*KEGPAC
Trigger: ACATGCTGGTCCTTCTTTTCAGCCAGAATTCTCTTC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCTGATTAAAGCTGCTTaGGTTTCAGGGTTTATTTCT +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMLIKAA*VSGFIS
Trigger: AGAAATAAACCCTGAAACTCAAGCAGCTTTAATCAG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACGACAGGGATTAGAGTaGCATTCATCAAAATCAAGT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASERQGLE*HSSKSS
Trigger: ACTTGATTTTGATGAATGTCACTCTAATCCCTGTCG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAACATTTGTTCTTCGTaGGACAGGATGCTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISNICSS*DRMLVR
Trigger: TCTCACAAGCATCCTGTCTCACGAAGAACAAATGTT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAAGCAGCCGAACCAATaGTTAAAGACCTCTAAGGCT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPKQPNQ*LKTSKA
Trigger: AGCCTTAGAGGTCTTTAATCATTGGTTCGGCTGCTT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAGGTCTATATCCGTATaGAATGCATTGATCGGTAAC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASERSISV*NALIGN
Trigger: GTTACCGATCAATGCATTTCATACGGATATAGACCT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAATTCAGTGTGTACCTaGTGGTTGCCGCCCTGTAGT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISNSVCT*WLPPCS
Trigger: ACTACAGGGCGGCAACCAGCAGGTACACACTGAATT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTGGAGTTGCTATGACTaGCCCAACGTCCAAACAAGC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISWSCYD*PNVQTS
Trigger: GCTTGTTTGGACGTTGGGGCAGTCATAGCAACTCCA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTGCATGGAGTTGCTATGACTaGCCCAACGTCCAAACAAGC +
Preference number: 4 (lower is better)
Translates to: VGLGIVTPINKLQNLRTAWSCYD*PNVQTS
Trigger: GCTTGTTTGGACGTTGGGGCAGTCATAGCAACTCCA...TGCAGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTCCTTGGAAGGAATGTaGTTTAAGATTTCCATAGAT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLSLEGM*FKISID
Trigger: ATCTATGGAAATCTTAAAGCACATTCCTTCCAAGGA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATTCCAGGATCATTCTTaGAGTTACCAATGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEFQDHS*SYQWCF
Trigger: GAAACACCATTGGTAACTGCAAGAATGATCCTGGAA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTGTAGTACCTGGAGTTaGTGTAAAGTCTTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISCSTWS*CKVFLH
Trigger: ATGGAGGAAGACTTTACAGCAACTCCAGGTACTACA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGAAGAGTAAATTCATCTaGTCCATCTTCAGTGAAACT +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLKSKFI*SIFSET
Trigger: AGTTTCACTGAAGATGGAGCAGATGAATTTACTCTT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGAATTTTCCATGGGCTaGTATGTCTTCATCAGTAAC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEEFSMG*YVFISN
Trigger: GTTACTGATGAAGACATAGCAGCCCATGGAAAATTC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACTTCCTTCCATGGTTaGATAAACTTGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISTSFHG*INLAFS
Trigger: ACTGAAGGCCAAGTTTATGCAACCATGGAAGGAAGT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAGGAACTGGTTTCTCTaGAGTCTGTTCTTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPRNWFL*SLFFPR
Trigger: CCTTGGAAAGAACAGACTGCAGAGAAACCAGTTCCT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATACTTTTGGCCCAATaGGTGGTGTTAGTGTTACCA +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISILLAQ*VVLVLP
Trigger: TGGTAACACTAACACCACGCATTGGGCCAAAAGTAT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATTCCCATTTATGTACTaGACAGATGGGGTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPFPFMY*TDGVVV
Trigger: GACAACCACCCCATCTGTGCAGTACATAAATGGGAA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTCAGGTTGATGGATACTaGTGTGCTCAGTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISQVDGY*CAQWSV
Trigger: CACAGACCACTGAGCACAGCAGTATCCATCAACCTG...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGTACCAGAAAACTTTTaGACAGCACTGGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPVPENF*TALGST
Trigger: AGTGCTTCCCAGTGCTGTGCAAAAGTTTTCTGGTAC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGATTCCAAGCCATTTaGATCTGGATCTGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISRFQAI*IWIWSR
Trigger: TCTACTCCAGATCCAGATGCAAATGGCTTGGAATCT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGCTTTCTTGTCTGGTTaGCTGAGTAGTTGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPAFLSG*LSSCRS
Trigger: ACTTCTGCAACTACTCAGGCAACCAGACAAGAAAGC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGTCATCCAGGGCTTTTaGTTCAGCTTTTATTCCTTC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISVIQGF*FSFYSF
Trigger: GAAGGAATAAAAGCTGAAGCAAAAGCCCTGGATGAC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGACAACCAAGGGAACCTaGTTAAACATACTGTGTATT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQTTKGT*LNILCI
Trigger: AATACACAGTATGTTTAAGCAGGTTCCCTTGGTTGT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGACTTTATGTAGCGCATaGGTTACTATTAAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLTLCSA*VTIKVE
Trigger: TTCAACCTTAATAGTAACCCATGCGCTACATAAAGT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCTCAGTGTGTACCTGCTaGTTGCCGCCCTGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCSVCTC*LPPCSE
Trigger: TTCACTACAGGGCGGCAACCAGCAGGTACACACTGA...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCAGCAAAGAGCTGCTCTaGAGTTGCTATGACTGCCCC +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCSKELL*SCYDCP
Trigger: GGGGCAGTCATAGCAACTCCAGAGCAGCTCTTTGCT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCCACTGTTGCCAGCCTaGCATCCTGGTTTTCACACT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCPLLPA*HPGFHT
Trigger: AGTGTGAAAACCAGGATGCCAGGCTGGCAACAGTGG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCCATTTGTGGTTCTTTaGATAAACTGGGTGATGCAG +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISPFVVL*INWVMQ
Trigger: CTGCATCACCCAGTTTATCCAAAGAACCACAAATGG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACGCCAGTTGTACTCTaGAGCACTTCTTCCTTAATT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISTPVVL*STSSLI
Trigger: AATTAAGGAAGAAGTGCTCCAGAGTACAACTGGCGT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAATGACTTCAGGAATTTaGTCAAAGATCAAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEMTSGI*SKIKVL
Trigger: GAGCACCTTGATCTTTGACCAAATTCCTGAAGTCAT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACTTCCCAGTCATCCATaGATGATCCATTATTATCAG +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASELPSHP*MIHYYQ
Trigger: CTGATAATAATGGATCATCCATGGATGACTGGGAAG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGATATTTTGTAGTACCTaGAGTTGCTGTAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLIFCST*SCCKVF
Trigger: GAAGACTTTACAGCAACTCCAGGTACTACAAAATAT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGACCATTTTGATACAGTaGCTGCTTCAACACTTAAAG +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMTILIQ*LLQHLK
Trigger: CTTTAAGTGTTGAAGCAGCCACTGTATCAAAATGGT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGAAGTGTGTGCAAATTaGGGAACAGTAGATACTGGC +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPEVCAN*GTVDTG
Trigger: GCCAGTATCTACTGTTCCCCAATTTGCACACACTTC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACTCCCCAGTCTGTCTTaGGAATTACAGAAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPLPSLS*ELQKEE
Trigger: TTCCTCTTTCTGTAATTCCCAAGACAGACTGGGGAG...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTGTTCTCATAGTTTCTaGAGAAATAGTCGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQCSHSF*RNSRFK
Trigger: CTTGAAGCGACTATTTCTCCAGAAACTATGAGAACA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTGTTCTCATAGTTTCTaGAGAAATAGTCGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMCSHSF*RNSRFK
Trigger: CTTGAAGCGACTATTTCTCCAGAAACTATGAGAACA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCAGTGGGTGGTCTTGTTaGCTGTGTAGCAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCSGWSC*LCSRRT
Trigger: AGTCCTCCTGCTACACAGCCAACAAGACCACCCACT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCAGAAACTGGATAAATaGTGGTTGCAGGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISQKLDK*WLQEPQ
Trigger: TTGAGGTTCCTGCAACCACCATTTATCCAGTTTCTG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTTCAGTTATGGTTTGTaGTCTACTAGTCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQFSYGL*STSLDF
Trigger: GAAATCCAGACTAGTAGACCACAAACCATAACTGAA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTCCCTGAAACGGTCTTaGAAACTACCGTCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISSLKRS*KLPSVD
Trigger: GTCCACAGACGGTAGTTTCCAAGACCGTTTCAGGGA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCAGACTTACGAGGAATTaGCAGGGATGTTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCRLTRN*QGCCRG
Trigger: CCCACGGCAACATCCCTGCCAATTCCTCGTAAGTCT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGAAATTGGCCCAATGTTaGTATTATTTCACTTTGGTC +
Preference number: 4 (lower is better)
Translates to: GARQPKMTERWSKNPNQLKLAQC*YYFTLV
Trigger: GACCAAAGTGAAATAATACCAACATTGGGCCAATTT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTGTAATATGGGGGATTaGATCCTTCCATCACATCAG +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISCNMGD*ILPSHQ
Trigger: CTGATGTGATGGAAGGATCCAATCCCCCATATTACA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCCATCGGTTTTGTTTTaGAAATCTTGGAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMPSVLF*KSWRIS
Trigger: TGAGATTCTCCAAGATTTCCAAAACAAAACCGATGG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTGAGAAGAAGAAAGCGTaGGCCTCTCAGAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISEKKKA*ASQKSV
Trigger: CACAGACTTCTGAGAGGCCCACGCTTTCTTCTTCTC...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCTGTTGCCTGATCATTaGAATCAAGAATTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISLLPDH*NQEFSL
Trigger: CAGCGAGAATTCTTGATTCCAATGATCAGGCAACAG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAGAAAAGAAGCTGTCTaGCTGGTTGGGTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPRKEAV*LVGSPI
Trigger: AATTGGAGACCCAACCAGCCAGACAGCTTCTTTTCT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACCTTTGGTATGCAGATaGGTTCATGCAGGTAATTTT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEPLVCR*VHAGNF
Trigger: AAAATTACCTGCATGAACCCATCTGCATACCAAAGG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGAAAATGACTGAACGGTaGTCCAAAAATCCAAACCAA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMKMTER*SKNPNQ
Trigger: TTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTCATTTAAAATGTTTTaGGAGCACGGCAACCCAAAA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMSFKMF*EHGNPK
Trigger: TTTTGGGTTGCCGTGCTCCCAAAACATTTTAAATGA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GACAAAATCAACAATCTTAAGGATTTAACTCAGCCTCAGTTGGCCTTGGCATTGAATGCTCTGTGGCTCTaGACACAACAGAGCACAGTT +
Preference number: 4 (lower is better)
Translates to: DKINNLKDLTQPQLALALNALWL*TQQSTV
Trigger: AACTGTGCTCTGTTGTGTCCAGAGCCACAGAGCATT...CAATGCCAAGGCCAACTGAGGCTGAGTTAAATCCTTAAGATTGTTGATTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
3UTR CAA 72 bp CTCGAGGTGATAGGAAAGGCACAGGAAGTTAGGACTTaGGCTGAAATGATGAAAACACATGTTCGCCATTTT +
Preference number: 4 (lower is better)
Translates to: LEVIGKAQEVRT*AEMMKTHVRHF
Trigger: AAAATGGCGAACATGTGTTTTCATCATTTCAGCCAAAGTCCTAACTTCCTGTGCCTTTCCTATCACCTCGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTCACGACACCATCCCATaGATCCGTAGCATAATGAGA +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISHDTIP*IRSIMR
Trigger: TCTCATTATGCTACGGATTCATGGGATGGTGTCGTG...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATCCAAGTCTTCTAAATaGGTGTGGATGGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPSKSSK*VWMVSS
Trigger: AGAAGACACCATCCACACTCATTTAGAAGACTTGGA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACCAGTCATCCATGGATaGTCCATTATTATCAGGCAT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPPVIHG*SIIIRH
Trigger: ATGCCTGATAATAATGGATCATCCATGGATGACTGG...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAATGACAAGTATGTCTTaGGAGGGTTCACCTAGAACT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPMTSMS*EGSPRT
Trigger: AGTTCTAGGTGAACCCTCTCAAGACATACTTGTCAT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTGGCGAGTCTGATCAATaGCAAGTATGTCTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISGESDQ*QVCLER
Trigger: CCTCTCAAGACATACTTGTCATTGATCAGACTCGCC...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTCGCGGAAGATGGCTTaGATGCTGAAGTTGTGTGAA +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISSRKMA*MLKLCE
Trigger: TTCACACAACTTCAGCATTCAAGCCATCTTCCGCGA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAGGAACATGAGATGTTaGTTCTCCAATGATTACCAT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASERNMRC*FSNDYH
Trigger: ATGGTAATCATTGGAGAATCAACATCTCATGTTCCT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACGATCTCTGTGTAGATaGATATACCTCAAATGTAGA +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASERSLCR*IYLKCR
Trigger: TCTACATTTGAGGTATATTCATCTACACAGAGATCG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGTTGCAGGAGAGTTTTaGGGGGATTCAAATGACTTT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPVAGEF*GDSNDF
Trigger: AAAGTCATTTGAATCCCCTCAAAACTCTCCTGCAAC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGATGGTTTTGGTGCTaGTGTAACAAATTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISRWFWC*CNKFFG
Trigger: GCCAAAGAATTTGTTACATCAGCACCAAAACCATCT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAAGAGGCAGCATCACTaGAACTGTTGGGAATCCATC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISKRQHH*NCWESI
Trigger: GATGGATTCCCAACAGTTTCAGTGATGCTGCCTCTT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCGACAGGGATTAGAGTaGCATTCATCAAAATCAAGT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISRQGLE*HSSKSS
Trigger: ACTTGATTTTGATGAATGTCACTCTAATCCCTGTCG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp TGTGGCTCTGGACACAACAGAGCACAGTTACAGCTTAACCTGATATTTCCTCACCTCAAAGAAACAGAGTaGTACCGAAGACAAAATCAA +
Preference number: 4 (lower is better)
Translates to: CGSGHNRAQLQLNLIFPHLKETE*YRRQNQ
Trigger: TTGATTTTGTCTTCGGTATCACTCTGTTTCTTTGAG...GTGAGGAAATATCAGGTTAAGCTGTAACTGTGCTCTGTTGTGTCCAGAGCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR GCA 90 bp GCCTCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGATAAGTCCTGACTCCTaGCTTTCCCATCTTATCTCC +
Preference number: 4 (lower is better)
Translates to: ASVGLGIVTPINKLQNLRISPDS*LSHLIS
Trigger: GGAGATAAGATGGGAAAGGCAGGAGTCAGGACTTAT...CCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTTCCAGGATCATTCTTaGAGTTACCAATGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISFQDHS*SYQWCF
Trigger: GAAACACCATTGGTAACTGCAAGAATGATCCTGGAA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAAGAGTAAATTCATCTaGTCCATCTTCAGTGAAACT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQKSKFI*SIFSET
Trigger: AGTTTCACTGAAGATGGAGCAGATGAATTTACTCTT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGAATTTTCCATGGGCTaGTATGTCTTCATCAGTAAC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISEFSMG*YVFISN
Trigger: GTTACTGATGAAGACATAGCAGCCCATGGAAAATTC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGTGAAATTTTGTGCTTaGTGGGGGCTGTGGCGTAGA +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCVKFCA*WGLWRR
Trigger: TCTACGCCACAGCCCCCAGCAAGCACAAAATTTCAC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCACATCAGTAGCATTTaGACACTCTTCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISHISSI*TLFFFF
Trigger: GAAGAAGAAGAAGAGTGTGCAAATGCTACTGATGTG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTTCAGTATGTTCATGTaGCTGATGACCAACTTCAGT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISFSMFM*LMTNFS
Trigger: ACTGAAGTTGGTCATCAGGCACATGAACATACTGAA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACACAGGGTTTACTGTTaGCTGATCATTGGAATCAAG +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPHRVYC*LIIGIK
Trigger: CTTGATTCCAATGATCAGGCAACAGTAAACCCTGTG...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGGAAAATGGTGGTGTTaGAACCTCAGTATTAAATTC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEGKWWC*NLSIKF
Trigger: GAATTTAATACTGAGGTTGCAACACCACCATTTTCC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGTAAATAGATTGCCGTaGCTTCCACTGACTCTTCAT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPVNRLP*LPLTLH
Trigger: ATGAAGAGTCAGTGGAAGGCACGGCAATCTATTTAC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTATCCTGGCACACAGGTaGATACGTAGGAAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISILAHR*IRRKFQ
Trigger: CTGAAACTTCCTACGTATGCACCTGTGTGCCAGGAT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCCTAACAGGAAGAAATaGCCACACTATTTCTATATA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMPNRKK*PHYFYI
Trigger: TATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACAACCAAGGGAACCTaGTTAAACATACTGTGTATT +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASETTKGT*LNILCI
Trigger: AATACACAGTATGTTTAAGCAGGTTCCCTTGGTTGT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTGCAACTGTTTCCATTCCGTaGACACACTGCAAGACATGG +
Preference number: 4 (lower is better)
Translates to: VGLGIVTPINKLQNLRTATVSIP*THCKTW
Trigger: CCATGTCTTGCAGTGTGTGCACGGAATGGAAACAGT...TGCAGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGACTTTATGTAGCGCATaGGTTACTATTAAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQTLCSA*VTIKVE
Trigger: TTCAACCTTAATAGTAACCCATGCGCTACATAAAGT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTGCATGCGGAGAAATTCACTaGTGTTGTAACTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: VGLGIVTPINKLQNLRTACGEIH*CCNWVA
Trigger: TGCCACCCAGTTACAACACCAGTGAATTTCTCCGCA...TGCAGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp CCATCTCAAAGAAACAGAGTGATACCGAAGACAAAATCAACAATCTTAAGGATTCATAACAGCCTACTCTaGGAGCCCGGATGGGATATC +
Preference number: 4 (lower is better)
Translates to: PSQRNRVIPKTKSTILRIHNSLL*EPGWDI
Trigger: GATATCCCATCCGGGCTCCCAGAGTAGGCTGTTATG...AATCCTTAAGATTGTTGATTTTGTCTTCGGTATCACTCTGTTTCTTTGAGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCTTCCCAGTCATCCATaGATGATCCATTATTATCAG +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISLPSHP*MIHYYQ
Trigger: CTGATAATAATGGATCATCCATGGATGACTGGGAAG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGATATTTTGTAGTACCTaGAGTTGCTGTAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMIFCST*SCCKVF
Trigger: GAAGACTTTACAGCAACTCCAGGTACTACAAAATAT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACACTTAAAGTACCATaGGCCAAAAGCACTGTTGTA +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISTLKVP*AKSTVV
Trigger: TACAACAGTGCTTTTGGCCCATGGTACTTTAAGTGT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTACTGAGAGCAGGAACTaGTTTCTCTGCAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISTESRN*FLCSLF
Trigger: GAACAGACTGCAGAGAAACCAGTTCCTGCTCTCAGT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCTCTTGTTCATCCAGTaGTGTTACTGCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCLLFIQ*CYCLLG
Trigger: CCCAAGGAGGCAGTAACACCACTGGATGAACAAGAG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAGTGGTAATATCACTTaGAACTGTGACTTTGATTGT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQSGNIT*NCDFDC
Trigger: ACAATCAAAGTCACAGTTCCAAGTGATATTACCACT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCATGGAATGGGACTGTaGGGAAAACATCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCHGMGL*GKHQAH
Trigger: GTGAGCCTGATGTTTTCCCCACAGTCCCATTCCATG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAAATTCCTCATGGAATaGGACTGTGGGGAAAACATC +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPKFLME*DCGENI
Trigger: GATGTTTTCCCCACAGTCCCATTCCATGAGGAATTT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAAACTGGATAAATGGTaGTTGCAGGAACCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEKLDKW*LQEPQK
Trigger: TTTTTGAGGTTCCTGCAACCACCATTTATCCAGTTT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCTGCTGTTGGTAAAATaGTGGATCTTCTATCAATTT +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQLLLVK*WIFYQF
Trigger: AAATTGATAGAAGATCCACCATTTTACCAACAGCAG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATTCAGTTATGGTTTGTaGTCTACTAGTCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEFSYGL*STSLDF
Trigger: GAAATCCAGACTAGTAGACCACAAACCATAACTGAA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGAGAAGAAGAAAGCGTaGGCCTCTCAGAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCEKKKA*ASQKSV
Trigger: CACAGACTTCTGAGAGGCCCACGCTTTCTTCTTCTC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGTATACATTAGGAAATaGACTGCACTGGAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISVYIRK*TALEAN
Trigger: ATTTGCCTCCAGTGCAGTCCATTTCCTAATGTATAC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAATAGTACAGTAGGCTaGTATACATTAGGAAATGGA +
Preference number: 4 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQNSTVG*YTLGNG
Trigger: TCCATTTCCTAATGTATACCAGCCTACTGTACTATT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGAATAGTACAGTAGGCTaGTATACATTAGGAAATGGA +
Preference number: 4 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMNSTVG*YTLGNG
Trigger: TCCATTTCCTAATGTATACCAGCCTACTGTACTATT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAATCATCTTATTTACATaGCCATCGGTGCTGAAATTG +
Preference number: 4 (lower is better)
Translates to: SCPGKAIFSLADSQRASEIILFT*PSVLKL
Trigger: CAATTTCAGCACCGATGGCCATGTAAATAAGATGAT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTCCAAACAAGCCTTCTaGGCAGCCTCAAAATTCAGT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISSKQAF*AASKFS
Trigger: ACTGAATTTTGAGGCTGCTCAGAAGGCTTGTTTGGA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAACATGAATTGGCTCTaGGAGAGATGTAGAGAGTTT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPNMNWL*ERCREF
Trigger: AAACTCTCTACATCTCTCTCAGAGCCAATTCATGTT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTCCTCTAACTGCTTTTaGGTACTATCTGGAATAAGA +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISSSNCF*VLSGIR
Trigger: TCTTATTCCAGATAGTACTCAAAAGCAGTTAGAGGA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATTCTGCAATACCAGTTaGTGTAGTTGGCTGAAATCT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPFCNTS*CSWLKS
Trigger: AGATTTCAGCCAACTACATCAACTGGTATTGCAGAA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTGTGAAGTCTGTCTACTaGACTGAAGGCAGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISVKSVY*TEGSGN
Trigger: ATTACCACTGCCTTCAGTTCAGTAGACAGACTTCAC...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTGTAGTGGGAGGAACATaGGATGTTGATTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISVVGGT*DVDSPM
Trigger: CATTGGAGAATCAACATCTCATGTTCCTCCCACTAC...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAATGGCAATCTCTCCTaGAGACTCTTCAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISNGNLS*RLFRKQ
Trigger: CTGTTTCCTGAAGAGTCTTCAGGAGAGATTGCCATT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTGTGACTGATGTGAACTaGAGTAGGTACTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISVTDVN*SRYCRW
Trigger: CCATCTACAGTACCTACTTCAGTTCACATCAGTCAC...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGCTACTGGGTCCTTCTaGGTCAGATATGTGACTGAT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCATGSF*VRYVTD
Trigger: ATCAGTCACATATCTGACTCAGAAGGACCCAGTAGC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTTGGGGAAAGTTTGTTaGAACTGTGCCACTGACCTT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISLGKVC*NCATDL
Trigger: AAGGTCAGTGGCACAGTTTCAACAAACTTTCCCCAA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTTTCTTCTGCCCACCTaGCAGTCTGATTTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISFLLPT*QSDFED
Trigger: ATCCTCAAAATCAGACTGTCAGGTGGGCAGAAGAAA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCAAGAGGCAGCATCACTaGAACTGTTGGGAATCCATC +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCKRQHH*NCWESI
Trigger: GATGGATTCCCAACAGTTTCAGTGATGCTGCCTCTT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAATCCTCGAATTCCCTaGAACGGTCTTGGAAACTAC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISNPRIP*NGLGNY
Trigger: GTAGTTTCCAAGACCGTTTCAGGGAATTCGAGGATT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATCTTCATAAGTCATTaGTTCATCATGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISIFISH*FIMCCL
Trigger: CAGGCAACACATGATGAATCAATGACTTATGAAGAT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCTGCCGTGCCTTCCACTaGCTCTTCATTAATGCCAAT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCCRAFH*LFINAN
Trigger: ATTGGCATTAATGAAGAGTCAGTGGAAGGCACGGCA...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACGACAGGGATTAGAGTaGCATTCATCAAAATCAAGT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPRQGLE*HSSKSS
Trigger: ACTTGATTTTGATGAATGTCACTCTAATCCCTGTCG...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACAAACATCTTGTCATTaGGGCCTATCCACTGATAAT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPQTSCH*GLSTDN
Trigger: ATTATCAGTGGATAGGCCTCAATGACAAGATGTTTG...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACATTCTCATGCCAAATaGTTACAACACAGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPHSHAK*LQHSLL
Trigger: GAGAAGACTGTGTTGTAATCATTTGGCATGAGAATG...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTCTTGCACGTATAGGTaGGATGGTAATTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISSCTYR*DGNCRE
Trigger: TTCCCTGCAATTACCATCTCACCTATACGTGCAAGA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTCTCCGGCTCCAACGATaGTCATGTTTGGATGTATTT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISLRLQR*SCLDVF
Trigger: AAATACATCCAAACATGATCATCGTTGGAGCCGGAG...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAAGCAGCCGAACCAATaGTTAAAGACCTCTAAGGCT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISKQPNQ*LKTSKA
Trigger: AGCCTTAGAGGTCTTTAATCATTGGTTCGGCTGCTT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATTCAAATGCGGGTTGTaGCACCCATCATCATTATAT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPFKCGL*HPSSLY
Trigger: ATATAATGATGATGGGTGTCACAACCCGCATTTGAA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATCAGCCATTAGATCATaGACTGGATCTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPSAIRS*TGSVSS
Trigger: TGAAGAAACAGATCCAGTGCATGATCTAATGGCTGA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGAATTGTTGGTCTCATaGCTTTCGGAAAATGTTTTG +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISELLVS*LSENVL
Trigger: CAAAACATTTTCCGAAAGGCATGAGACCAACAATTC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGCTATCGTGGAATCCTaGCCTCTGATTAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCAIVES*PLIKAA
Trigger: AGCAGCTTTAATCAGAGGGCAGGATTCCACGATAGC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCGGCTTATTGCAGTTTaGGGGGAAAATTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCRLIAV*GENSLQ
Trigger: CTGCAGTGAATTTTCCCCCCAAACTGCAATAAGCCG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAACACTTAAAGTACCATaGGCCAAAAGCACTGTTGTA +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPTLKVP*AKSTVV
Trigger: TACAACAGTGCTTTTGGCCCATGGTACTTTAAGTGT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCACTGAGAGCAGGAACTaGTTTCTCTGCAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCTESRN*FLCSLF
Trigger: GAACAGACTGCAGAGAAACCAGTTCCTGCTCTCAGT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAACTGGATAAATGGTaGTTGCAGGAACCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISKLDKW*LQEPQK
Trigger: TTTTTGAGGTTCCTGCAACCACCATTTATCCAGTTT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTCAAAACCAGTCCTGTTaGCTCAGTGGAGAATGTAGT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISQNQSC*LSGECS
Trigger: ACTACATTCTCCACTGAGCCAACAGGACTGGTTTTG...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGTAGATGGTGAAGTCTaGGTGTCCCTAAATGCTGCA +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCVDGEV*VSLNAA
Trigger: TGCAGCATTTAGGGACACCCAGACTTCACCATCTAC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGCTGGCTCTATAGTTTaGGGAAAGTTTGTTGAAACT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPAGSIV*GKFVET
Trigger: AGTTTCAACAAACTTTCCCCAAACTATAGAGCCAGC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAACAGCTTTAGCGCTTaGCACCTCAGGATGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISNSFSA*HLRMFF
Trigger: GAAAAACATCCTGAGGTGCCAAGCGCTAAAGCTGTT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAGAAAAGAAGCTGTCTaGCTGGTTGGGTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISRKEAV*LVGSPI
Trigger: AATTGGAGACCCAACCAGCCAGACAGCTTCTTTTCT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACCTTTGGTATGCAGATaGGTTCATGCAGGTAATTTT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPPLVCR*VHAGNF
Trigger: AAAATTACCTGCATGAACCCATCTGCATACCAAAGG...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATCATCTTATTTACATaGCCATCGGTGCTGAAATTG +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISIILFT*PSVLKL
Trigger: CAATTTCAGCACCGATGGCCATGTAAATAAGATGAT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CCA 90 bp TCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTACACACTGCAAGACATaGAATCCACTCCAACGGCTA +
Preference number: 4 (lower is better)
Translates to: SVGLGIVTPINKLQNLRTTHCKT*NPLQRL
Trigger: TAGCCGTTGGAGTGGATTCCATGTCTTGCAGTGTGT...AGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR TCA 90 bp TCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTTCCAAACAAGCCTTCTaGGCAGCCTCAAAATTCAGT +
Preference number: 4 (lower is better)
Translates to: SVGLGIVTPINKLQNLRTSKQAF*AASKFS
Trigger: ACTGAATTTTGAGGCTGCTCAGAAGGCTTGTTTGGA...AGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTTCTGTACGATGCTGTaGTGGAAAAGGTGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISFCTML*WKRCSR
Trigger: TCTACTACACCTTTTCCATCACAGCATCGTACAGAA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTGAAGACTCTGTAACATaGATTGGCTCTGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISEDSVT*IGSERD
Trigger: ATCTCTCTCAGAGCCAATTCATGTTACAGAGTCTTC...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTCTGCTCCATCTTCAGTaGAACTTGGGATGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISLLHLQ*NLGCLY
Trigger: ATAAAGACATCCCAAGTTTCACTGAAGATGGAGCAG...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATCCTCTAACTGCTTTTaGGTACTATCTGGAATAAGA +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPSSNCF*VLSGIR
Trigger: TCTTATTCCAGATAGTACTCAAAAGCAGTTAGAGGA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCAAGGGAATTCTTCCTaGGTTGTTCCCTCTGTGATT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCQGNSS*VVPSVI
Trigger: AATCACAGAGGGAACAACTCAGGAAGAATTCCCTTG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAGGAACATGAGATGTTaGTTCTCCAATGATTACCAT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPRNMRC*FSNDYH
Trigger: ATGGTAATCATTGGAGAATCAACATCTCATGTTCCT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGTAGTGGGAGGAACATaGGATGTTGATTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCVVGGT*DVDSPM
Trigger: CATTGGAGAATCAACATCTCATGTTCCTCCCACTAC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCAGTATCTCTCTCTGTaGCTGATTCTGCCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCQYLSL*LILPLF
Trigger: AAAAAGGGGCAGAATCAGTCACAGAGAGAGATACTG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCAATGGCAATCTCTCCTaGAGACTCTTCAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCNGNLS*RLFRKQ
Trigger: CTGTTTCCTGAAGAGTCTTCAGGAGAGATTGCCATT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTCAGTATCTGACTCTTaGATTGTTGGTCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISSVSDS*IVGLMP
Trigger: AGGCATGAGACCAACAATTCAAGAGTCAGATACTGA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTCAAAGATGTCTGTTTaGGATACGAGTGGTCCAACT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISSKMSV*DTSGPT
Trigger: AGTTGGACCACTCGTATCTCAAACAGACATCTTTGA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAATCTTCATAAGTCATTaGTTCATCATGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPIFISH*FIMCCL
Trigger: CAGGCAACACATGATGAATCAATGACTTATGAAGAT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCACCTCTGTTACACTCTaGTCCATAAGGTGGGTAGTA +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCTSVTL*SIRWVV
Trigger: TACTACCCACCTTATGGATCAGAGTGTAACAGAGGT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGGAGATGATGGTGTCTaGGAAGACAACTTCGCAAAT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCGDDGV*EDNFAN
Trigger: ATTTGCGAAGTTGTCTTCTCAGACACCATCATCTCC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAAGGTATTCCTCACTTaGTGGTTTGAAAGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISKVFLT*WFESRF
Trigger: GAAGCGACTTTCAAACCATCAAGTGAGGAATACCTT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTGGTGGGAAACATCTTaGTTGCTTCTCCAGAAACTT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISWWETS*LLLQKL
Trigger: AAGTTTCTGGAGAAGCAATCAAGATGTTTCCCACCA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACTGATTAAAGCTGCTTaGGTTTCAGGGTTTATTTCT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPLIKAA*VSGFIS
Trigger: AGAAATAAACCCTGAAACTCAAGCAGCTTTAATCAG...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAACATTTGTTCTTCGTaGGACAGGATGCTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISNICSS*DRMLVR
Trigger: TCTCACAAGCATCCTGTCTCACGAAGAACAAATGTT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTCAGTCAAAGAGCAAGTaGAACCATTTCCAGCCTAAA +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISQSKSK*NHFQPK
Trigger: TTTAGGCTGGAAATGGTTTCACTTGCTCTTTGACTG...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCATAAGTCCTGACTCCTaGCTTTCCCATCTTATCTCC +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCISPDS*LSHLIS
Trigger: GGAGATAAGATGGGAAAGGCAGGAGTCAGGACTTAT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTCCTTGGAAGGAATGTaGTTTAAGATTTCCATAGAT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISSLEGM*FKISID
Trigger: ATCTATGGAAATCTTAAAGCACATTCCTTCCAAGGA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR GCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTACAGTGGTAACGAGATaGTTCCCATTTATGTACTGC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISTVVTR*FPFMYC
Trigger: GCAGTACATAAATGGGAAGCATCTCGTTACCACTGT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGGTAGGCACCACTTTTaGAGAAGGTTGTTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCGRHHF*RRLFRN
Trigger: GTTTCTGAACAACCTTCTGCAAAAGTGGTGCCTACC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCAATGTAGTTTCCACATaGGGAGACAAAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCNVVST*GDKVPA
Trigger: AGCTGGCACTTTGTCTCCGCATGTGGAAACTACATT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGCTTTCTTGTCTGGTTaGCTGAGTAGTTGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCAFLSG*LSSCRS
Trigger: ACTTCTGCAACTACTCAGGCAACCAGACAAGAAAGC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTCTCTTGAACTTGAGTaGTGTCATCATTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISSLELE*CHHYFH
Trigger: ATGAAAGTAATGATGACAGCACTCAAGTTCAAGAGA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAGAAAGGTTGACAGCTaGCTCATAGATCTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISRKVDS*LIDLLN
Trigger: GTTCAAGAGATCTATGAGGCAGCTGTCAACCTTTCT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGACCATCAGACAAAGTaGTTGATTCAAACATGTCAT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPDHQTK*LIQTCH
Trigger: ATGACATGTTTGAATCAAGCACTTTGTCTGATGGTC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGGAAAATGGTGGTGTTaGAACCTCAGTATTAAATTC +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPGKWWC*NLSIKF
Trigger: GAATTTAATACTGAGGTTGCAACACCACCATTTTCC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CCATCTCAAAGAAACAGAGTGATACCGAAGACAAAATCAACAATCTTAAGGATTATTCCGTGCACACACTaGAAGACATGGAATCCACTC +
Preference number: 4 (lower is better)
Translates to: PSQRNRVIPKTKSTILRIIPCTH*KTWNPL
Trigger: GAGTGGATTCCATGTCTTGCAGTGTGTGCACGGAAT...AATCCTTAAGATTGTTGATTTTGTCTTCGGTATCACTCTGTTTCTTTGAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp CCATCTCAAAGAAACAGAGTGATACCGAAGACAAAATCAACAATCTTAAGGATTCGGCTTATTGCAGTTTaGGGGGAAAATTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: PSQRNRVIPKTKSTILRIRLIAV*GENSLQ
Trigger: CTGCAGTGAATTTTCCCCCCAAACTGCAATAAGCCG...AATCCTTAAGATTGTTGATTTTGTCTTCGGTATCACTCTGTTTCTTTGAGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAACCATTTTGATACAGTaGCTGCTTCAACACTTAAAG +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPTILIQ*LLQHLK
Trigger: CTTTAAGTGTTGAAGCAGCCACTGTATCAAAATGGT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAATTGTGAATTTTCCATaGGCTGCTATGTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPIVNFP*AAMSSS
Trigger: TGATGAAGACATAGCAGCCCATGGAAAATTCACAAT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATGTTCTCATAGTTTCTaGAGAAATAGTCGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPCSHSF*RNSRFK
Trigger: CTTGAAGCGACTATTTCTCCAGAAACTATGAGAACA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCAGTTACAGCACCTGGTaGATAAGACACACTGTGATC +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCSYSTW*IRHTVI
Trigger: GATCACAGTGTGTCTTATCCACCAGGTGCTGTAACT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAGGTTGTTCAGAAACTaGATAAATGGTGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISRLFRN*INGGCR
Trigger: CCTGCAACCACCATTTATCCAGTTTCTGAACAACCT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCCTCAACAGTGGTACTaGAAATCCACTCAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCPQQWY*KSTQKC
Trigger: ACACTTCTGAGTGGATTTCCAGTACCACTGTTGAGG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCTGCTGTTGGTAAAATaGTGGATCTTCTATCAATTT +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISLLLVK*WIFYQF
Trigger: AAATTGATAGAAGATCCACCATTTTACCAACAGCAG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTGTTTGAGATACGAGTaGTCCAACTTCTTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISCLRYE*SNFFCH
Trigger: GTGGCAAAAGAAGTTGGACCACTCGTATCTCAAACA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATATTCCTTCAATCTCTaGAATAACTGTGGCAGACTT +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPYSFNL*NNCGRL
Trigger: AAGTCTGCCACAGTTATTCCAGAGATTGAAGGAATA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAATTGGCCCAATGTTaGTATTATTTCACTTTGGTC +
Preference number: 4 (lower is better)
Translates to: GKAIFSLADSQRASETISKLAQC*YYFTLV
Trigger: GACCAAAGTGAAATAATACCAACATTGGGCCAATTT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTGTAATATGGGGGATTaGATCCTTCCATCACATCAG +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISCNMGD*ILPSHQ
Trigger: CTGATGTGATGGAAGGATCCAATCCCCCATATTACA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCAGAAAAGAAGCTGTCTaGCTGGTTGGGTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCRKEAV*LVGSPI
Trigger: AATTGGAGACCCAACCAGCCAGACAGCTTCTTTTCT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAAAATGACTGAACGGTaGTCCAAAAATCCAAACCAA +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPKMTER*SKNPNQ
Trigger: TTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCTTTCTGTTCAAAACTaGCAATATTTCCCACGGGAG +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCLSVQN*QYFPRE
Trigger: CTCCCGTGGGAAATATTGTCAGTTTTGAACAGAAAG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCCAGTCATCCATGGATaGTCCATTATTATCAGGCAT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCPVIHG*SIIIRH
Trigger: ATGCCTGATAATAATGGATCATCCATGGATGACTGG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTTCTGCAATACCAGTTaGTGTAGTTGGCTGAAATCT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISFCNTS*CSWLKS
Trigger: AGATTTCAGCCAACTACATCAACTGGTATTGCAGAA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCTCAAAGATGTCTGTTTaGGATACGAGTGGTCCAACT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCSKMSV*DTSGPT
Trigger: AGTTGGACCACTCGTATCTCAAACAGACATCTTTGA...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTATCAGACAAAGTGCTTaGTTCAAACATGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISIRQSA*FKHVIQ
Trigger: CTGGATGACATGTTTGAATCAAGCACTTTGTCTGAT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCAGAAACAAATGTGGTaGTGCTTTCTTGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCQKQMW*CFLVWL
Trigger: CAACCAGACAAGAAAGCAGCACCACATTTGTTTCTG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGTAAATAGATTGCCGTaGCTTCCACTGACTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCVNRLP*LPLTLH
Trigger: ATGAAGAGTCAGTGGAAGGCACGGCAATCTATTTAC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCATAAGTCCTTTGGTATaGAGATGGGTTCATGCAGGT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCISPLV*RWVHAG
Trigger: ACCTGCATGAACCCATCTGCATACCAAAGGACTTAT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTATGACTTCAGGAATTTaGTCAAAGATCAAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISMTSGI*SKIKVL
Trigger: GAGCACCTTGATCTTTGACCAAATTCCTGAAGTCAT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCTTTCAAATTCCTCATaGAATGGGACTGTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCLSNSS*NGTVGK
Trigger: TTTCCCCACAGTCCCATTCCATGAGGAATTTGAAAG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTCCTTTCAGACTGTGTTaGTGTTGTCAAGGACATAAA +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISPFRLC*CCQGHK
Trigger: TTTATGTCCTTGACAACACCAACACAGTCTGAAAGG...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTCCTTTGGTATGCAGATaGGTTCATGCAGGTAATTTT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISPLVCR*VHAGNF
Trigger: AAAATTACCTGCATGAACCCATCTGCATACCAAAGG...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAATAGTACAGTAGGCTaGTATACATTAGGAAATGGA +
Preference number: 4 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPNSTVG*YTLGNG
Trigger: TCCATTTCCTAATGTATACCAGCCTACTGTACTATT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTCCTCTAACTGCTTTTaGGTACTATCTGGAATAAGA +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISSSNCF*VLSGIR
Trigger: TCTTATTCCAGATAGTACTCAAAAGCAGTTAGAGGA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR TCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTCGATCTCTGTGTAGATaGATATACCTCAAATGTAGA +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISRSLCR*IYLKCR
Trigger: TCTACATTTGAGGTATATTCATCTACACAGAGATCG...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCATCAGACAAAGTGCTTaGTTCAAACATGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCIRQSA*FKHVIQ
Trigger: CTGGATGACATGTTTGAATCAAGCACTTTGTCTGAT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCAAACATCTTGTCATTaGGGCCTATCCACTGATAAT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCQTSCH*GLSTDN
Trigger: ATTATCAGTGGATAGGCCTCAATGACAAGATGTTTG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCATTCTCATGCCAAATaGTTACAACACAGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCHSHAK*LQHSLL
Trigger: GAGAAGACTGTGTTGTAATCATTTGGCATGAGAATG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTGGTCCAACTTCTTTTaGCACATTTTCCATTCTGTT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISWSNFF*HIFHSV
Trigger: AACAGAATGGAAAATGTGGCAAAAGAAGTTGGACCA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTACAACCAAGGGAACCTaGTTAAACATACTGTGTATT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISTTKGT*LNILCI
Trigger: AATACACAGTATGTTTAAGCAGGTTCCCTTGGTTGT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTGCAAAATACTTAGAAAAATaGTCTGTGGCTCTGGACACA +
Preference number: 4 (lower is better)
Translates to: VGLGIVTPINKLQNLRTAKYLEK*SVALDT
Trigger: TGTGTCCAGAGCCACAGAGCATTTTTCTAAGTATTT...TGCAGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCATGACTTCAGGAATTTaGTCAAAGATCAAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCMTSGI*SKIKVL
Trigger: GAGCACCTTGATCTTTGACCAAATTCCTGAAGTCAT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGCTGGCTCTATAGTTTaGGGAAAGTTTGTTGAAACT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCAGSIV*GKFVET
Trigger: AGTTTCAACAAACTTTCCCCAAACTATAGAGCCAGC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTATTCCTTCAATCTCTaGAATAACTGTGGCAGACTT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISYSFNL*NNCGRL
Trigger: AAGTCTGCCACAGTTATTCCAGAGATTGAAGGAATA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTTGTTTTGGAAATCTTaGAGAATCTCAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISLFWKS*RISVPS
Trigger: GGAAGGAACTGAGATTCTCCAAGATTTCCAAAACAA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCTGCAGAAGTGTGAAATaGATCAACAATATCCACTTC +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCCRSVK*INNIHF
Trigger: GAAGTGGATATTGTTGATTCATTTCACACTTCTGCA...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR TCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCCTCACTTGATGGTTTaGAAGTCGCTTCAATATTTA +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCPHLMV*KSLQYL
Trigger: TAAATATTGAAGCGACTTTCAAACCATCAAGTGAGG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAAGAGTAAATTCATCTaGTCCATCTTCAGTGAAACT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISKSKFI*SIFSET
Trigger: AGTTTCACTGAAGATGGAGCAGATGAATTTACTCTT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCTGGTCCAACTTCTTTTaGCACATTTTCCATTCTGTT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCWSNFF*HIFHSV
Trigger: AACAGAATGGAAAATGTGGCAAAAGAAGTTGGACCA...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGACCATCAGACAAAGTaGTTGATTCAAACATGTCAT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCDHQTK*LIQTCH
Trigger: ATGACATGTTTGAATCAAGCACTTTGTCTGATGGTC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp GTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTGCACTAGTTGAACATCAATaGATGCTTCGAAGCATTTTT +
Preference number: 4 (lower is better)
Translates to: VGLGIVTPINKLQNLRTALVEHQ*MLRSIF
Trigger: AAAAATGCTTCGAAGCATGCATTGATGTTCAACTAG...TGCAGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp GTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTGCAACTTTATGTAGCGCATaGGTTACTATTAAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: VGLGIVTPINKLQNLRTATLCSA*VTIKVE
Trigger: TTCAACCTTAATAGTAACCCATGCGCTACATAAAGT...TGCAGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CCA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAGTGGTAATATCACTTaGAACTGTGACTTTGATTGT +
Preference number: 4 (lower is better)
Translates to: LHLTGRNAHTISIYSLISSGNIT*NCDFDC
Trigger: ACAATCAAAGTCACAGTTCCAAGTGATATTACCACT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCCATCGGTTTTGTTTTaGAAATCTTGGAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCPSVLF*KSWRIS
Trigger: TGAGATTCTCCAAGATTTCCAAAACAAAACCGATGG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCAAAATGACTGAACGGTaGTCCAAAAATCCAAACCAA +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCKMTER*SKNPNQ
Trigger: TTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCATCATCTTATTTACATaGCCATCGGTGCTGAAATTG +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCIILFT*PSVLKL
Trigger: CAATTTCAGCACCGATGGCCATGTAAATAAGATGAT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCTCTCTTGAACTTGAGTaGTGTCATCATTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCSLELE*CHHYFH
Trigger: ATGAAAGTAATGATGACAGCACTCAAGTTCAAGAGA...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR GCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCCTAACAGGAAGAAATaGCCACACTATTTCTATATA +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCPNRKK*PHYFYI
Trigger: TATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CCA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCACTTTATGTAGCGCATaGGTTACTATTAAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCTLCSA*VTIKVE
Trigger: TTCAACCTTAATAGTAACCCATGCGCTACATAAAGT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS GCA 90 bp ATCCGACAGCCACCCGTAATCGCACTGGTCAAAGCCGTTCCTCCATaGCGCCTGGAGTTCCCCCACTGTTGCCAGCCTGGCATCCTGGTT +
Preference number: 5 (lower is better)
Translates to: IRQPPVIALVKAVPP*RLEFPHCCQPGILV
Trigger: AACCAGGATGCCAGGCTGGCAACAGTGGGGGAACTCCAGGCGGCATGGAGGAACGGCTTTGACCAGTGCGATTACGGGTGGCTGTCGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
ENST00000515397.1
CDS CCA 90 bp TCAAAACGATACAGGGTTCTCACCCCAAGTAGACCACCTCCACACTaGGCCCTGGCCACAGTCACAGGGTGGCGCACGCTGGCATCCGAC +
Preference number: 5 (lower is better)
Translates to: SKRYRVLTPSRPPPH*ALATVTGWRTLASD
Trigger: GTCGGATGCCAGCGTGCGCCACCCTGTGACTGTGGCCAGGGCCCAGTGTGGAGGTGGTCTACTTGGGGTGAGAACCCTGTATCGTTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
ENST00000515397.1
CDS GCA 90 bp TTCAATCCCGTACATGACGTCACAGCGGTAAAGACCCGCATCACTTaGCAGCAGCTTGACCACAGTGAGGGAGGCATCGCCCACAGCCTC +
Preference number: 5 (lower is better)
Translates to: FNPVHDVTAVKTRIT*QQLDHSEGGIAHSL
Trigger: GAGGCTGTGGGCGATGCCTCCCTCACTGTGGTCAAGCTGCTGGCAAGTGATGCGGGTCTTTACCGCTGTGACGTCATGTACGGGATTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS CCA 90 bp AGCTTCTCCAGAGCCCTGCTCCATAAAGACAGAGGCAGGACTACGTaGGAGAGTGGTCAGCCCTTCCTGAACCCCAGGTTGATGGATACT +
Preference number: 5 (lower is better)
Translates to: SFSRALLHKDRGRTT*ESGQPFLNPRLMDT
Trigger: AGTATCCATCAACCTGGGGTTCAGGAAGGGCTGACCACTCTCCCACGTAGTCCTGCCTCTGTCTTTATGGAGCAGGGCTCTGGAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGGAGTTCCCCCACTGTaGCCAGCCTGGCATCCTGGT +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLGVPPL*PAWHPG
Trigger: ACCAGGATGCCAGGCTGGCAACAGTGGGGGAACTCC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS TCA 90 bp TGCTCTGGAGTTGCTATGACTGCCCCAACGTCCAAACAAGCCTTCTaGGCAGCCTCAAAATTCAGTGTGTACCTGCTGGTTGCCGCCCTG +
Preference number: 5 (lower is better)
Translates to: CSGVAMTAPTSKQAF*AASKFSVYLLVAAL
Trigger: CAGGGCGGCAACCAGCAGGTACACACTGAATTTTGAGGCTGCTCAGAAGGCTTGTTTGGACGTTGGGGCAGTCATAGCAACTCCAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS TCA 90 bp CAGAAAGGCTCGGGGCAGCTCGCCTGCAAGTTCAAATGCGGGTTGTaGCACCCATCATCATTATATCACTGTACCGTCAGAGCCGAGGAG +
Preference number: 5 (lower is better)
Translates to: QKGSGQLACKFKCGL*HPSSLYHCTVRAEE
Trigger: CTCCTCGGCTCTGACGGTACAGTGATATAATGATGATGGGTGTCACAACCCGCATTTGAACTTGCAGGCGAGCTGCCCCGAGCCTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342785.8
ENST00000343200.9
ENST00000503923.1
CDS GCA 90 bp GATGGGCACCCTGCAGACGGCATTCCCGTTCAGCTGCATCCCATGTaGGTCGATGGGCAAAGTATTTGTAGCACTGCCCTTGGAATTTGT +
Preference number: 5 (lower is better)
Translates to: DGHPADGIPVQLHPM*VDGQSICSTALGIC
Trigger: ACAAATTCCAAGGGCAGTGCTACAAATACTTTGCCCATCGACGCACATGGGATGCAGCTGAACGGGAATGCCGTCTGCAGGGTGCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000505615.1
ENST00000512590.6
ENST00000513016.5
CDS GCA 90 bp ATTCTGAGAAGGTGCAACACTTTCAAACTGGCCACGCCTAGCTTCTaGAGCTTCTGGGTCCTTGGGCACAGTGGTAACGAGATGCTTCCC +
Preference number: 5 (lower is better)
Translates to: ILRRCNTFKLATPSF*SFWVLGHSGNEMLP
Trigger: GGGAAGCATCTCGTTACCACTGTGCCCAAGGACCCAGAAGCTGCAGAAGCTAGGCGTGGCCAGTTTGAAAGTGTTGCACCTTCTCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTCACTTGCCAGCAGCTaGACCACAGTGAGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLSLASS*TTVREA
Trigger: TGCCTCCCTCACTGTGGTCAAGCTGCTGGCAAGTGA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGGAGTTCCCCCACTGTaGCCAGCCTGGCATCCTGGT +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASEGVPPL*PAWHPG
Trigger: ACCAGGATGCCAGGCTGGCAACAGTGGGGGAACTCC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS GCA 90 bp CGTCCAAACAAGCCTTCTGAGCAGCCTCAAAATTCAGTGTGTACCTaGTGGTTGCCGCCCTGTAGTGAAACACAACCCCATCCACAGTCA +
Preference number: 5 (lower is better)
Translates to: RPNKPSEQPQNSVCT*WLPPCSETQPHPQS
Trigger: TGACTGTGGATGGGGTTGTGTTTCACTACAGGGCGGCAACCAGCAGGTACACACTGAATTTTGAGGCTGCTCAGAAGGCTTGTTTGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS GCA 90 bp CTGCTCAAATCCATCTTCATAGGCAGCAAAGAGCTGCTCTGGAGTTaGTATGACTGCCCCAACGTCCAAACAAGCCTTCTGAGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LLKSIFIGSKELLWS*YDCPNVQTSLLSSL
Trigger: GAGGCTGCTCAGAAGGCTTGTTTGGACGTTGGGGCAGTCATAGCAACTCCAGAGCAGCTCTTTGCTGCCTATGAAGATGGATTTGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTCACTTGCCAGCAGCTaGACCACAGTGAGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQSLASS*TTVREA
Trigger: TGCCTCCCTCACTGTGGTCAAGCTGCTGGCAAGTGA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGTGTGTACCTGCTGGTaGCCGCCCTGTAGTGAAACA +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLVCTCW*PPCSET
Trigger: TGTTTCACTACAGGGCGGCAACCAGCAGGTACACAC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGGAGTTCCCCCACTGTaGCCAGCCTGGCATCCTGGT +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISGVPPL*PAWHPG
Trigger: ACCAGGATGCCAGGCTGGCAACAGTGGGGGAACTCC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCAGACTTACGAGGAATaGGCAGGGATGTTGCCGTGG +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLQTYEE*AGMLPW
Trigger: CCACGGCAACATCCCTGCCAATTCCTCGTAAGTCTG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGAGGCACGGGTTCATTTaGCAGCGATCAGGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLRHGFI*QRSGPG
Trigger: ACCAGGACCTGATCGCTGCAAAATGAACCCGTGCCT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS GCA 90 bp CTAGCTTCTGCAGCTTCTGGGTCCTTGGGCACAGTGGTAACGAGATaGTTCCCATTTATGTACTGCACAGATGGGGTGGTTGTCACATCA +
Preference number: 5 (lower is better)
Translates to: LASAASGSLGTVVTR*FPFMYCTDGVVVTS
Trigger: TGATGTGACAACCACCCCATCTGTGCAGTACATAAATGGGAAGCATCTCGTTACCACTGTGCCCAAGGACCCAGAAGCTGCAGAAGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGTGTGTACCTGCTGGTaGCCGCCCTGTAGTGAAACA +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQVCTCW*PPCSET
Trigger: TGTTTCACTACAGGGCGGCAACCAGCAGGTACACAC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGTGTGTACCTGCTGGTaGCCGCCCTGTAGTGAAACA +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMVCTCW*PPCSET
Trigger: TGTTTCACTACAGGGCGGCAACCAGCAGGTACACAC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GCACAGTTACAGCTTAACCTGATATTTCCTCACCCCTCTAAAAATCCATTTGCCGGAGTTCCCCCACTGTaGCCAGCCTGGCATCCTGGT +
Preference number: 5 (lower is better)
Translates to: AQLQLNLIFPHPSKNPFAGVPPL*PAWHPG
Trigger: ACCAGGATGCCAGGCTGGCAACAGTGGGGGAACTCC...GGCAAATGGATTTTTAGAGGGGTGAGGAAATATCAGGTTAAGCTGTAACTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGAGGCACGGGTTCATTTaGCAGCGATCAGGTCCTGTC +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMRHGFI*QRSGPV
Trigger: GACAGGACCTGATCGCTGCAAAATGAACCCGTGCCT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342785.8
ENST00000512590.6
CDS GCA 90 bp TCCATCTTCATAGGCAGCAAAGAGCTGCTCTGGAGTTGCTATGACTaGCCCAACGTCCAAACAAGCCTTCTGAGCAGCCTCAAAATTCAG +
Preference number: 5 (lower is better)
Translates to: SIFIGSKELLWSCYD*PNVQTSLLSSLKIQ
Trigger: CTGAATTTTGAGGCTGCTCAGAAGGCTTGTTTGGACGTTGGGGCAGTCATAGCAACTCCAGAGCAGCTCTTTGCTGCCTATGAAGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS GCA 90 bp GGGTCCTTGGGCACAGTGGTAACGAGATGCTTCCCATTTATGTACTaGACAGATGGGGTGGTTGTCACATCAGTAGCATTTGCACACTCT +
Preference number: 5 (lower is better)
Translates to: GSLGTVVTRCFPFMY*TDGVVVTSVAFAHS
Trigger: AGAGTGTGCAAATGCTACTGATGTGACAACCACCCCATCTGTGCAGTACATAAATGGGAAGCATCTCGTTACCACTGTGCCCAAGGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS GCA 90 bp CCCAATCCTTCGTCGATAATGGAGGAAGCTGTACCAGAAAACTTTTaGACAGCACTGGGAAGCACTGGAACAACAGAGCTGCTGACTGTG +
Preference number: 5 (lower is better)
Translates to: PNPSSIMEEAVPENF*TALGSTGTTELLTV
Trigger: CACAGTCAGCAGCTCTGTTGTTCCAGTGCTTCCCAGTGCTGTGCAAAAGTTTTCTGGTACAGCTTCCTCCATTATCGACGAAGGATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS CCA 90 bp AAGCTGCTTGAGTTTCAGGGTTTATTTCTGGAGAAGAAGAAAGCGTaGGCCTCTCAGAAGTCTGTGGACTTAGCCAAGGCACCACACCTG +
Preference number: 5 (lower is better)
Translates to: KLLEFQGLFLEKKKA*ASQKSVDLAKAPHL
Trigger: CAGGTGTGGTGCCTTGGCTAAGTCCACAGACTTCTGAGAGGCCCACGCTTTCTTCTTCTCCAGAAATAAACCCTGAAACTCAAGCAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000507162.1
ENST00000513016.5
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGATGAACATCTTGGCCTaGGAAGGCGGCTTATTGCAG +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLMNILA*EGGLLQ
Trigger: CTGCAATAAGCCGCCTTCCAAGGCCAAGATGTTCAT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp TGTGGCTCTGGACACAACAGAGCACAGTTACAGCTTAACCTGATATTTCCTCACGTGTGTACCTGCTGGTaGCCGCCCTGTAGTGAAACA +
Preference number: 5 (lower is better)
Translates to: CGSGHNRAQLQLNLIFPHVCTCW*PPCSET
Trigger: TGTTTCACTACAGGGCGGCAACCAGCAGGTACACAC...GTGAGGAAATATCAGGTTAAGCTGTAACTGTGCTCTGTTGTGTCCAGAGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTGTCAGGGTGAAATTTaGTGCTTGCTGGGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMCQGEI*CLLGAV
Trigger: CACAGCCCCCAGCAAGCACAAAATTTCACCCTGACA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGCAGCTTCTGGGTCCTaGGGCACAGTGGTAACGAGA +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISAASGS*GTVVTR
Trigger: TCTCGTTACCACTGTGCCCAAGGACCCAGAAGCTGC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAGGCACGGGTTCATTTaGCAGCGATCAGGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASERHGFI*QRSGPG
Trigger: ACCAGGACCTGATCGCTGCAAAATGAACCCGTGCCT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGAAGCTGTCTGGCTGGTaGGGTCTCCAATTCTCGTAT +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLKLSGW*GLQFSY
Trigger: ATACGAGAATTGGAGACCCAACCAGCCAGACAGCTT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS TCA 90 bp CAAATCCATCTTCATAGGCAGCAAAGAGCTGCTCTGGAGTTGCTATaGCTGCCCCAACGTCCAAACAAGCCTTCTGAGCAGCCTCAAAAT +
Preference number: 5 (lower is better)
Translates to: QIHLHRQQRAALELL*LPQRPNKPSEQPQN
Trigger: ATTTTGAGGCTGCTCAGAAGGCTTGTTTGGACGTTGGGGCAGTCATAGCAACTCCAGAGCAGCTCTTTGCTGCCTATGAAGATGGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS TCA 90 bp GAGTGGGAAGCTCTGGATAGGCGGGCTCTATTGGAAATAGCTCACTaGAAGGACCAGAAAGAGCCTTCCACACCTATAGACCTTTATCCT +
Preference number: 5 (lower is better)
Translates to: EWEALDRRALLEIAH*KDQKEPSTPIDLYP
Trigger: AGGATAAAGGTCTATAGGTGTGGAAGGCTCTTTCTGGTCCTTTCAGTGAGCTATTTCCAATAGAGCCCGCCTATCCAGAGCTTCCCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513016.5
CDS GCA 90 bp CTTGGGAGTCCAAGCTGTAGAACTGAGAGCAGGAACTGGTTTCTCTaGAGTCTGTTCTTTCCAAGGGAATTCTTCCTGAGTTGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: LGSPSCRTESRNWFL*SLFFPREFFLSCSL
Trigger: GAGGGAACAACTCAGGAAGAATTCCCTTGGAAAGAACAGACTGCAGAGAAACCAGTTCCTGCTCTCAGTTCTACAGCTTGGACTCCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS GCA 90 bp TGGATGAGTATCACTTTCAGAGCTGTCCGAGAAATTCTGAGAAGGTaGAACACTTTCAAACTGGCCACGCCTAGCTTCTGCAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: WMSITFRAVREILRR*NTFKLATPSFCSFW
Trigger: CCAGAAGCTGCAGAAGCTAGGCGTGGCCAGTTTGAAAGTGTTGCACCTTCTCAGAATTTCTCGGACAGCTCTGAAAGTGATACTCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS-3UTR CAA 90 bp GCACAGTTACAGCTTAACCTGATATTTCCTCACCCCTCTAAAAATCCATTTGCCTCACTTGCCAGCAGCTaGACCACAGTGAGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: AQLQLNLIFPHPSKNPFASLASS*TTVREA
Trigger: TGCCTCCCTCACTGTGGTCAAGCTGCTGGCAAGTGA...GGCAAATGGATTTTTAGAGGGGTGAGGAAATATCAGGTTAAGCTGTAACTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGAATGAGAGACGCCAGTaGTACTCTGGAGCACTTCTT +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLNERRQ*YSGALL
Trigger: AAGAAGTGCTCCAGAGTACAACTGGCGTCTCTCATT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGGTGTTACTGCCTCCTaGGGAGTCCAAGCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASEGVTAS*GVQAVE
Trigger: TTCTACAGCTTGGACTCCCAAGGAGGCAGTAACACC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATTCCTGAACCCCAGGTaGATGGATACTGCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASEFLNPR*MDTAVL
Trigger: GAGCACAGCAGTATCCATCAACCTGGGGTTCAGGAA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCCTGACAGTCTGATTTaGAGGATGTCCGATGTCCGT +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMPDSLI*RMSDVR
Trigger: ACGGACATCGGACATCCTCAAAATCAGACTGTCAGG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTTCCCTGAAACGGTCTaGGAAACTACCGTCTGTGGA +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQFPETV*ETTVCG
Trigger: TCCACAGACGGTAGTTTCCAAGACCGTTTCAGGGAA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGGCACGGGTTCATTTaGCAGCGATCAGGTCCTGTC +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISRHGFI*QRSGPV
Trigger: GACAGGACCTGATCGCTGCAAAATGAACCCGTGCCT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342785.8
ENST00000512590.6
CDS TCA 90 bp GACAGTGTGCTAGTTGGATCAGGGGAGCTTTTGTTCTGCTCTGAATaGAGAGGCAGCATCACTGAAACTGTTGGGAATCCATCAGCAGTA +
Preference number: 5 (lower is better)
Translates to: DSVLVGSGELLFCSE*RGSITETVGNPSAV
Trigger: TACTGCTGATGGATTCCCAACAGTTTCAGTGATGCTGCCTCTTCATTCAGAGCAGAACAAAAGCTCCCCTGATCCAACTAGCACACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS TCA 90 bp TTTAGGGATCAGCGCCTCGACTCCTGCCACCTCCGGCTCCAACGATaGTCATGTTTGGATGTATTTATTGAATTGTCCTTTGCTGATGAG +
Preference number: 5 (lower is better)
Translates to: FRDQRLDSCHLRLQR*SCLDVFIELSFADE
Trigger: CTCATCAGCAAAGGACAATTCAATAAATACATCCAAACATGATCATCGTTGGAGCCGGAGGTGGCAGGAGTCGAGGCGCTGATCCCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513016.5
CDS TCA 90 bp CATCAGCAAAGCTCCTTGTCTTGGGCACTAGGAAAGAGGAAATTCTaGGGTCTCATCATAGAGGCATTCAACTGTCCTAGAACAGGGTCC +
Preference number: 5 (lower is better)
Translates to: HQQSSLSWALGKRKF*GLIIEAFNCPRTGS
Trigger: GGACCCTGTTCTAGGACAGTTGAATGCCTCTATGATGAGACCTCAGAATTTCCTCTTTCCTAGTGCCCAAGACAAGGAGCTTTGCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513016.5
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGGGCTTTTTCCCACTTaGACTTTATGTAGCGCATGG +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQGLFPT*TLCSAW
Trigger: CCATGCGCTACATAAAGTCAAAGTGGGAAAAAGCCC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGGAGTTCCCCCACTGTaGCCAGCCTGGCATCCTGGT +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCGVPPL*PAWHPG
Trigger: ACCAGGATGCCAGGCTGGCAACAGTGGGGGAACTCC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATGTGATAGCCTGAGGTaGGACTGTGGCTTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASECDSLR*DCGFLF
Trigger: GAACAGAAAGCCACAGTCCAACCTCAGGCTATCACA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATATCCCAGGGCTTCTaGGTACTGCCAGTAGGTGTG +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISISQGF*VLPVGV
Trigger: CACACCTACTGGCAGTACCAAGAAGCCCTGGGATAT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCACTTCCTTCCATGGTaGCATAAACTTGGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQHFLPW*HKLGLQ
Trigger: CTGAAGGCCAAGTTTATGCAACCATGGAAGGAAGTG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCACTTCCTTCCATGGTaGCATAAACTTGGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMHFLPW*HKLGLQ
Trigger: CTGAAGGCCAAGTTTATGCAACCATGGAAGGAAGTG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTTTCTGCCCCATAATTaGGTTCTCCTAATCGCTCTG +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLFLPHN*VLLIAL
Trigger: CAGAGCGATTAGGAGAACCAAATTATGGGGCAGAAA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATGTGGTGCTGCTTTCTaGTCTGGTTGCCTGAGTAGT +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASECGAAF*SGCLSS
Trigger: ACTACTCAGGCAACCAGACAAGAAAGCAGCACCACA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATTCCCTGAAACGGTCTaGGAAACTACCGTCTGTGGA +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASEFPETV*ETTVCG
Trigger: TCCACAGACGGTAGTTTCCAAGACCGTTTCAGGGAA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACAGACTTACGAGGAATaGGCAGGGATGTTGCCGTGG +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPQTYEE*AGMLPW
Trigger: CCACGGCAACATCCCTGCCAATTCCTCGTAAGTCTG...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTCTCCAATTCTCGTATaGCAGTGTGCTGCCATCAGT +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMSPILV*QCAAIS
Trigger: ACTGATGGCAGCACACTGCAATACGAGAATTGGAGA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAAGCTGTCTGGCTGGTaGGGTCTCCAATTCTCGTAT +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASEKLSGW*GLQFSY
Trigger: ATACGAGAATTGGAGACCCAACCAGCCAGACAGCTT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS TCA 90 bp AATACACATCGTAAGTTTCCTGGGGAGAACGGAATCCATAAGTCCTaGCTCCTGCCTTTCCCATCTTATCTCCATAACAGCCTACTCTGG +
Preference number: 5 (lower is better)
Translates to: NTHRKFPGENGIHKS*LLPFPSYLHNSLLW
Trigger: CCAGAGTAGGCTGTTATGGAGATAAGATGGGAAAGGCAGGAGTCAGGACTTATGGATTCCGTTCTCCCCAGGAAACTTACGATGTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS TCA 90 bp CCTCTCAGAACCTGTCAACAATTCATCTTCAGAGACTGTATATGCTaGTCCATCGCCCTCTTGTTCATCCAGTGGTGTTACTGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: PLRTCQQFIFRDCIC*SIALLFIQWCYCLL
Trigger: AAGGAGGCAGTAACACCACTGGATGAACAAGAGGGCGATGGATCAGCATATACAGTCTCTGAAGATGAATTGTTGACAGGTTCTGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS TCA 90 bp CTGCCACTTGCTGTTCTGATGCTGCTATCGTGGAATCCTGCCCTCTaGTTAAAGCTGCTTGAGTTTCAGGGTTTATTTCTGGAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: LPLAVLMLLSWNPAL*LKLLEFQGLFLEKK
Trigger: CTTCTTCTCCAGAAATAAACCCTGAAACTCAAGCAGCTTTAATCAGAGGGCAGGATTCCACGATAGCAGCATCAGAACAGCAAGTGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000507162.1
ENST00000513016.5
CDS TCA 90 bp ATAGCCCTTTTACATTGCAATGGCATCCTCTACCTACTGTGGCACTaGGACATGAGCTTAACCACATCCTATGCACAAGAGTGGGAAGCT +
Preference number: 5 (lower is better)
Translates to: IALLHCNGILYLLWH*DMSLTTSYAQEWEA
Trigger: AGCTTCCCACTCTTGTGCATAGGATGTGGTTAAGCTCATGTCTCAGTGCCACAGTAGGTAGAGGATGCCATTGCAATGTAAAAGGGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513016.5
CDS GCA 90 bp GTCTTGTTCAGTTATGGTTTGTGGTCTACTAGTCTGGATTTCTTCTaGCCACCTGACAGTCTGATTTTGAGGATGTCCGATGTCCGTGGA +
Preference number: 5 (lower is better)
Translates to: VLFSYGLWSTSLDFF*PPDSLILRMSDVRG
Trigger: TCCACGGACATCGGACATCCTCAAAATCAGACTGTCAGGTGGGCAGAAGAAATCCAGACTAGTAGACCACAAACCATAACTGAACAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATGAACATCTTGGCCTaGGAAGGCGGCTTATTGCAG +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISMNILA*EGGLLQ
Trigger: CTGCAATAAGCCGCCTTCCAAGGCCAAGATGTTCAT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGATATTTATGAACATCTaGGCCTTGGAAGGCGGCTTA +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLIFMNI*ALEGGL
Trigger: TAAGCCGCCTTCCAAGGCCAAGATGTTCATAAATAT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGGGCTTTTTCCCACTTaGACTTTATGTAGCGCATGG +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASEGLFPT*TLCSAW
Trigger: CCATGCGCTACATAAAGTCAAAGTGGGAAAAAGCCC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCTTGATATTTCCATTTaGGGCCACAAGGACAGTAGT +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLLDISI*GHKDSS
Trigger: ACTACTGTCCTTGTGGCCCAAAATGGAAATATCAAG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTCACTTGCCAGCAGCTaGACCACAGTGAGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISSLASS*TTVREA
Trigger: TGCCTCCCTCACTGTGGTCAAGCTGCTGGCAAGTGA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGACCATTTGTGGTTCTTaGGATAAACTGGGTGATGCA +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLTICGS*DKLGDA
Trigger: TGCATCACCCAGTTTATCCAAAGAACCACAAATGGT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGTAGGTGTGGGTAATTaGGTGGCTAAACTATCTGTG +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQVGVGN*VAKLSV
Trigger: CACAGATAGTTTAGCCACCAAATTACCCACACCTAC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAATATCCCAGGGCTTCTaGGTACTGCCAGTAGGTGTG +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPISQGF*VLPVGV
Trigger: CACACCTACTGGCAGTACCAAGAAGCCCTGGGATAT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGAGGACCCACTTCTATTaGTTCAATCTGTGTAACCGA +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLRTHFY*FNLCNR
Trigger: TCGGTTACACAGATTGAACAAATAGAAGTGGGTCCT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTTAAAGGGGAAACAGTaGTGGATGCTGAGACTGACT +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQLKGKQ*WMLRLT
Trigger: AGTCAGTCTCAGCATCCACAACTGTTTCCCCTTTAA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTATCCTACCACTAGTTaGTCTCTCTTCCCAGTCATC +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMYPTTS*SLFPVI
Trigger: GATGACTGGGAAGAGAGACAAACTAGTGGTAGGATA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCATGGTTGCATAAACTaGGCCTTCAGTGCTTGTGAT +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQHGCIN*AFSACD
Trigger: ATCACAAGCACTGAAGGCCAAGTTTATGCAACCATG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGGTGTTACTGCCTCCTaGGGAGTCCAAGCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPGVTAS*GVQAVE
Trigger: TTCTACAGCTTGGACTCCCAAGGAGGCAGTAACACC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTCATCTGTTTTCACTTaGTGCTCAGTTACAGCACCT +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLSSVFT*CSVTAP
Trigger: AGGTGCTGTAACTGAGCACAAAGTGAAAACAGATGA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGACTTAAAGATACTTTaGGCCCAATGCGTGGTGTTA +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLDLKIL*AQCVVL
Trigger: TAACACCACGCATTGGGCCAAAAGTATCTTTAAGTC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATTACCATGTCACTGGTaGTTTCTTCACCAGGTTCCC +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASELPCHW*FLHQVP
Trigger: GGGAACCTGGTGAAGAAACAACCAGTGACATGGTAA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATGTCAGGGTGAAATTTaGTGCTTGCTGGGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPCQGEI*CLLGAV
Trigger: CACAGCCCCCAGCAAGCACAAAATTTCACCCTGACA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTCTACCCAGCTTTCTTaGGTAGACAACAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMSTQLS*VDNRSS
Trigger: AGATGACCTGTTGTCTACCAAAGAAAGCTGGGTAGA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATTCCTGAACCCCAGGTaGATGGATACTGCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPFLNPR*MDTAVL
Trigger: GAGCACAGCAGTATCCATCAACCTGGGGTTCAGGAA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCTTCCACTTCTGCTGTaGGTAAAATGGTGGATCTTC +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMLPLLL*VKWWIF
Trigger: GAAGATCCACCATTTTACCAACAGCAGAAGTGGAAG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTCTTGTCTTACAGGGTaGACTTCTTGCCTAGACCAT +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMSCLTG*TSCLDH
Trigger: ATGGTCTAGGCAAGAAGTCAACCCTGTAAGACAAGA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCTGACTCTTGAATTGTaGGTCTCATGCCTTTCGGAA +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMLTLEL*VSCLSE
Trigger: TTCCGAAAGGCATGAGACCAACAATTCAAGAGTCAG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGTGGTCCAACTTCTTTaGCCACATTTTCCATTCTGT +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLVVQLL*PHFPFC
Trigger: ACAGAATGGAAAATGTGGCAAAAGAAGTTGGACCAC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTGCCTCATAGATCTCTaGAACTTGAGTGCTGTCATC +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQCLIDL*NLSAVI
Trigger: GATGACAGCACTCAAGTTCAAGAGATCTATGAGGCA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTTGGTCTGCAATAGCTaGACCATCAGACAAAGTGCT +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMLVCNS*TIRQSA
Trigger: AGCACTTTGTCTGATGGTCAAGCTATTGCAGACCAA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGATGGTGGGAAACATCTaGATTGCTTCTCCAGAAACT +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLMVGNI*IASPET
Trigger: AGTTTCTGGAGAAGCAATCAAGATGTTTCCCACCAT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCACAGGGTTTACTGTaGCCTGATCATTGGAATCAA +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQPQGLL*PDHWNQ
Trigger: TTGATTCCAATGATCAGGCAACAGTAAACCCTGTGG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTCATGCTCAAACATCTaGTCATTGAGGCCTATCCAC +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMSCSNI*SLRPIH
Trigger: GTGGATAGGCCTCAATGACAAGATGTTTGAGCATGA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATCTCCAATTCTCGTATaGCAGTGTGCTGCCATCAGT +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASESPILV*QCAAIS
Trigger: ACTGATGGCAGCACACTGCAATACGAGAATTGGAGA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAGCTGTCTGGCTGGTaGGGTCTCCAATTCTCGTAT +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISKLSGW*GLQFSY
Trigger: ATACGAGAATTGGAGACCCAACCAGCCAGACAGCTT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGATTGGGCCAATCCCTTaGTGCCCTTTTTCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLIGPIP*CPFSLF
Trigger: AAAAAGAGAAAAAGGGCACAAAGGGATTGGCCCAAT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS TCA 90 bp GTCTTCCACAGTGGGTGGTCTTGTTGGCTGTGTAGCAGGAGGACTTaGAGTCGTGAAATACTCTCTATCAATATCGGTTTCTGTTTCCTT +
Preference number: 5 (lower is better)
Translates to: VFHSGWSCWLCSRRT*SREILSINIGFCFL
Trigger: AAGGAAACAGAAACCGATATTGATAGAGAGTATTTCACGACTTCAAGTCCTCCTGCTACACAGCCAACAAGACCACCCACTGTGGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS GCA 90 bp GAGGTCCACATCTTCTACTTCACCCAAAGCACTTCCTTCCATGGTTaGATAAACTTGGCCTTCAGTGCTTGTGATAGGTGGAACTTTTTC +
Preference number: 5 (lower is better)
Translates to: EVHIFYFTQSTSFHG*INLAFSACDRWNFF
Trigger: GAAAAAGTTCCACCTATCACAAGCACTGAAGGCCAAGTTTATGCAACCATGGAAGGAAGTGCTTTGGGTGAAGTAGAAGATGTGGACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CCA 90 bp CATGTCATCCAGGGCTTTTGCTTCAGCTTTTATTCCTTCAATCTCTaGAATAACTGTGGCAGACTTACGAGGAATTGGCAGGGATGTTGC +
Preference number: 5 (lower is better)
Translates to: HVIQGFCFSFYSFNL*NNCGRLTRNWQGCC
Trigger: GCAACATCCCTGCCAATTCCTCGTAAGTCTGCCACAGTTATTCCAGAGATTGAAGGAATAAAAGCTGAAGCAAAAGCCCTGGATGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS CCA 90 bp GTGACATTCATCAAAATCAAGTTCACACTGGTCTCCGCTGTATCCTaGCACACAGGTGCATACGTAGGAAGTTTCAGTAGGATAACAGGT +
Preference number: 5 (lower is better)
Translates to: VTFIKIKFTLVSAVS*HTGAYVGSFSRITG
Trigger: ACCTGTTATCCTACTGAAACTTCCTACGTATGCACCTGTGTGCCAGGATACAGCGGAGACCAGTGTGAACTTGATTTTGATGAATGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000507162.1
ENST00000512590.6
ENST00000513016.5
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCTTGATATTTCCATTTaGGGCCACAAGGACAGTAGT +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMLDISI*GHKDSS
Trigger: ACTACTGTCCTTGTGGCCCAAAATGGAAATATCAAG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGACCATTTGTGGTTCTTaGGATAAACTGGGTGATGCA +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQTICGS*DKLGDA
Trigger: TGCATCACCCAGTTTATCCAAAGAACCACAAATGGT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATGTGATAGCCTGAGGTaGGACTGTGGCTTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPCDSLR*DCGFLF
Trigger: GAACAGAAAGCCACAGTCCAACCTCAGGCTATCACA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCTGTGTAACCGATTCTaGTGTTTGTTTATCTTCCAC +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLLCNRF*CLFIFH
Trigger: GTGGAAGATAAACAAACACAAGAATCGGTTACACAG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGAATGACTTCAGGAATTaGGTCAAAGATCAAGGTGCT +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLNDFRN*VKDQGA
Trigger: AGCACCTTGATCTTTGACCAAATTCCTGAAGTCATT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATTAAAGGGGAAACAGTaGTGGATGCTGAGACTGACT +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASELKGKQ*WMLRLT
Trigger: AGTCAGTCTCAGCATCCACAACTGTTTCCCCTTTAA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATATCCTACCACTAGTTaGTCTCTCTTCCCAGTCATC +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASEYPTTS*SLFPVI
Trigger: GATGACTGGGAAGAGAGACAAACTAGTGGTAGGATA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGTAGTAGACAGATATTaGCCAAGAAACTCTTCCGTT +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLVVDRY*PRNSSV
Trigger: AACGGAAGAGTTTCTTGGCAAATATCTGTCTACTAC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGGGAAATCAAAAGACTaGGTCATTTCCACAGAAGAC +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMGKSKD*VISTED
Trigger: GTCTTCTGTGGAAATGACCAAGTCTTTTGATTTCCC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTCATCTGTTTTCACTTaGTGCTCAGTTACAGCACCT +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQSSVFT*CSVTAP
Trigger: AGGTGCTGTAACTGAGCACAAAGTGAAAACAGATGA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGACTTAAAGATACTTTaGGCCCAATGCGTGGTGTTA +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQDLKIL*AQCVVL
Trigger: TAACACCACGCATTGGGCCAAAAGTATCTTTAAGTC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGATGAGTTCTGTGGCTTaGGGCTTTTCAAATAATCCT +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLMSSVA*GFSNNP
Trigger: AGGATTATTTGAAAAGCCCAAAGCCACAGAACTCAT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTTACCATGTCACTGGTaGTTTCTTCACCAGGTTCCC +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISLPCHW*FLHQVP
Trigger: GGGAACCTGGTGAAGAAACAACCAGTGACATGGTAA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGCAGCTTCTGGGTCCTaGGGCACAGTGGTAACGAGA +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCAASGS*GTVVTR
Trigger: TCTCGTTACCACTGTGCCCAAGGACCCAGAAGCTGC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTGTAGATTCATTAGGTaGCACAGCAGTAGACAATTC +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLCRFIR*HSSRQF
Trigger: GAATTGTCTACTGCTGTGCAACCTAATGAATCTACA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGGATTCTGCCCCTTTTTaGGCTGTTCCACTTTCAAAT +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQDSAPF*AVPLSN
Trigger: ATTTGAAAGTGGAACAGCCAAAAAAGGGGCAGAATC...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCCTTTTCGGCTTGAATaGCATACTCTACGTTTAATG +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLPFRLE*HTLRLM
Trigger: CATTAAACGTAGAGTATGCAATTCAAGCCGAAAAGG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTACTTCCTTTTCGGCTaGAATTGCATACTCTACGTT +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLYFLFG*NCILYV
Trigger: AACGTAGAGTATGCAATTCAAGCCGAAAAGGAAGTA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATGTGGTGCTGCTTTCTaGTCTGGTTGCCTGAGTAGT +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPCGAAF*SGCLSS
Trigger: ACTACTCAGGCAACCAGACAAGAAAGCAGCACCACA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTGTCATCCAGGGCTTTaGCTTCAGCTTTTATTCCTT +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMCHPGL*LQLLFL
Trigger: AAGGAATAAAAGCTGAAGCAAAAGCCCTGGATGACA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACATGTCTCGGTATCTaGCTCACAAAGTGCACCAAC +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISTCLGI*LTKCTN
Trigger: GTTGGTGCACTTTGTGAGCAAGATACCGAGACATGT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAGTTGGAAGGTGACGTaGAATGAAACCATCTTTGCA +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQSWKVT*NETIFA
Trigger: TGCAAAGATGGTTTCATTCAACGTCACCTTCCAACT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGAGTTGGAAGGTGACGTaGAATGAAACCATCTTTGCA +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMSWKVT*NETIFA
Trigger: TGCAAAGATGGTTTCATTCAACGTCACCTTCCAACT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGCATAGAATAAGTCCTTaGGTATGCAGATGGGTTCAT +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLHRISP*VCRWVH
Trigger: ATGAACCCATCTGCATACCAAAGGACTTATTCTATG...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAAGAAGAGTTCGACATaGGAGTCCTTAGTTCCATCA +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQKKSST*ESLVPS
Trigger: TGATGGAACTAAGGACTCCAATGTCGAACTCTTCTT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS TCA 90 bp CCAGTAGGTGTGGGTAATTTGGTGGCTAAACTATCTGTGATAGCCTaGGGTTGGACTGTGGCTTTCTGTTCAAAACTGACAATATTTCCC +
Preference number: 5 (lower is better)
Translates to: PVGVGNLVAKLSVIA*GWTVAFCSKLTIFP
Trigger: GGGAAATATTGTCAGTTTTGAACAGAAAGCCACAGTCCAACCTCAGGCTATCACAGATAGTTTAGCCACCAAATTACCCACACCTACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS TCA 90 bp GGTTTCTTAGTGATCGCGGAAGATGGCTTGAATGCTGAAGTTGTGTaGAGTCTGTCTACTGAACTGAAGGCAGTGGTAATATCACTTGGA +
Preference number: 5 (lower is better)
Translates to: GFLVIAEDGLNAEVV*SLSTELKAVVISLG
Trigger: TCCAAGTGATATTACCACTGCCTTCAGTTCAGTAGACAGACTTCACACAACTTCAGCATTCAAGCCATCTTCCGCGATCACTAAGAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS TCA 90 bp GCTGCTTTCTTGTCTGGTTGCCTGAGTAGTTGCAGAAGTGTGAAATaGATCAACAATATCCACTTCTCCAGATCCTTCTCCAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: AAFLSGCLSSCRSVK*INNIHFSRSFSRRF
Trigger: GAACCTTCTGGAGAAGGATCTGGAGAAGTGGATATTGTTGATTCATTTCACACTTCTGCAACTACTCAGGCAACCAGACAAGAAAGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS GCA 90 bp TGGTGGTGTTGCAACCTCAGTATTAAATTCCACAGGGTTTACTGTTaGCTGATCATTGGAATCAAGAATTCTCGCTGCCACTTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: WWCCNLSIKFHRVYC*LIIGIKNSRCHLLF
Trigger: GAACAGCAAGTGGCAGCGAGAATTCTTGATTCCAATGATCAGGCAACAGTAAACCCTGTGGAATTTAATACTGAGGTTGCAACACCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000507162.1
ENST00000513016.5
CDS CCA 90 bp CTGTTAGGTTTTAAGGTGGAATCCTCGAATTCCCTGAAACGGTCTTaGAAACTACCGTCTGTGGACCTCTCATATGACACTGTATTTGAC +
Preference number: 5 (lower is better)
Translates to: LLGFKVESSNSLKRS*KLPSVDLSYDTVFD
Trigger: GTCAAATACAGTGTCATATGAGAGGTCCACAGACGGTAGTTTCCAAGACCGTTTCAGGGAATTCGAGGATTCCACCTTAAAACCTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS CCA 90 bp AAGGACCAGAAAGAGCCTTCCACACCTATAGACCTTTATCCTTCCTaGGATGTGACCCAGATTAGGCTGATTTTAGTTCTTGTCATCAAC +
Preference number: 5 (lower is better)
Translates to: KDQKEPSTPIDLYPS*DVTQIRLILVLVIN
Trigger: GTTGATGACAAGAACTAAAATCAGCCTAATCTGGGTCACATCCCAGGAAGGATAAAGGTCTATAGGTGTGGAAGGCTCTTTCTGGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513016.5
CDS-3UTR CAA 90 bp GCCTCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGATGAACATCTTGGCCTaGGAAGGCGGCTTATTGCAG +
Preference number: 5 (lower is better)
Translates to: ASVGLGIVTPINKLQNLRMNILA*EGGLLQ
Trigger: CTGCAATAAGCCGCCTTCCAAGGCCAAGATGTTCAT...CCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTCAATCTTAGACCATTaGATGCGGAGAAATTCACTG +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQSILDH*MRRNSL
Trigger: CAGTGAATTTCTCCGCATCAAATGGTCTAAGATTGA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTGTGGTTCTTaGGATAAACTGGGTGATGCA +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASETICGS*DKLGDA
Trigger: TGCATCACCCAGTTTATCCAAAGAACCACAAATGGT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGTAGGTGTGGGTAATTaGGTGGCTAAACTATCTGTG +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISVGVGN*VAKLSV
Trigger: CACAGATAGTTTAGCCACCAAATTACCCACACCTAC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAATGAGAGACGCCAGTaGTACTCTGGAGCACTTCTT +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPNERRQ*YSGALL
Trigger: AAGAAGTGCTCCAGAGTACAACTGGCGTCTCTCATT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGAATGACTTCAGGAATTaGGTCAAAGATCAAGGTGCT +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQNDFRN*VKDQGA
Trigger: AGCACCTTGATCTTTGACCAAATTCCTGAAGTCATT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCTAAAGGCTTGGATGTaGTATTATCTTCATCCCATG +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQLKAWM*YYLHPM
Trigger: CATGGGATGAAGATAATACAACATCCAAGCCTTTAG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCATGGTTGCATAAACTaGGCCTTCAGTGCTTGTGAT +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISHGCIN*AFSACD
Trigger: ATCACAAGCACTGAAGGCCAAGTTTATGCAACCATG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGATAAGTAGTAGGCTCTaGGGTGCTACTATAACTAAC +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMISSRL*GATITN
Trigger: GTTAGTTATAGTAGCACCCAAGAGCCTACTACTTAT...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATTACCATGTCACTGGTaGTTTCTTCACCAGGTTCCC +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPLPCHW*FLHQVP
Trigger: GGGAACCTGGTGAAGAAACAACCAGTGACATGGTAA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATCGGTTTCTGTTTCCTaGGCTACAATATCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASESVSVS*ATISSR
Trigger: CCTTGAAGATATTGTAGCCAAGGAAACAGAAACCGA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTATTTTCTGAGATTCTaGGTCAATGGCAATCTCTCC +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQYFLRF*VNGNLS
Trigger: GGAGAGATTGCCATTGACCAAGAATCTCAGAAAATA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTATTTTCTGAGATTCTaGGTCAATGGCAATCTCTCC +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMYFLRF*VNGNLS
Trigger: GGAGAGATTGCCATTGACCAAGAATCTCAGAAAATA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTCTACCCAGCTTTCTTaGGTAGACAACAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISSTQLS*VDNRSS
Trigger: AGATGACCTGTTGTCTACCAAAGAAAGCTGGGTAGA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGTTTCACTTACAAACTaGGTAGGCACCACTTTTGCA +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASEVSLTN*VGTTFA
Trigger: TGCAAAAGTGGTGCCTACCAAGTTTGTAAGTGAAAC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATTACCGTTTCTTCTTTaGCTATGGGATGAGACACTG +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASELPFLL*LWDETL
Trigger: CAGTGTCTCATCCCATAGCAAAAGAAGAAACGGTAA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGTTCACTTTCAATTTCTaGTCTTACAGGGTTGACTTC +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLFTFNF*SYRVDF
Trigger: GAAGTCAACCCTGTAAGACAAGAAATTGAAAGTGAA...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGATTGTTTGTTCTGTaGCAGGAGAGTTTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISRLFVL*QESFEG
Trigger: CCCCTCAAAACTCTCCTGCAACAGAACAAACAATCT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTCTGTGAATCAAAGATaGTTTGTTCTGTTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMSVNQR*FVLLQE
Trigger: CTCCTGCAACAGAACAAACAATCTTTGATTCACAGA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGTACTTTCTTCCTTTTaGATTGGTGAATCTGTGACT +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLVLSSF*IGESVT
Trigger: AGTCACAGATTCACCAATCAAAAAGGAAGAAAGTAC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCTTCAATTTTGTCACTaGAGGTACTTTCCACTTGAG +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQLQFCH*RYFPLE
Trigger: CTCAAGTGGAAAGTACCTCAAGTGACAAAATTGAAG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGGCTGTTGAAGAATTCTaGTTAGAGTCTTGTTCAGTT +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLAVEEF*LESCSV
Trigger: AACTGAACAAGACTCTAACAAGAATTCTTCAACAGC...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTGCCTCATAGATCTCTaGAACTTGAGTGCTGTCATC +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISCLIDL*NLSAVI
Trigger: GATGACAGCACTCAAGTTCAAGAGATCTATGAGGCA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCATCAGACAAAGTGCTaGATTCAAACATGTCATCCA +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQHQTKC*IQTCHP
Trigger: TGGATGACATGTTTGAATCAAGCACTTTGTCTGATG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTTGGTCTGCAATAGCTaGACCATCAGACAAAGTGCT +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISLVCNS*TIRQSA
Trigger: AGCACTTTGTCTGATGGTCAAGCTATTGCAGACCAA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGTGGTATTATTTCACTTaGGTCTGCAATAGCTTGACC +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMWYYFT*VCNSLT
Trigger: GGTCAAGCTATTGCAGACCAAAGTGAAATAATACCA...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCTGAGTCCTTTCAAATaGGCCCAATGTTGGTATTAT +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMLSPFK*AQCWYY
Trigger: ATAATACCAACATTGGGCCAATTTGAAAGGACTCAG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCTGAAGGTTCTAATTTaGTGTCAGGAGATAAAGAGG +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQLKVLI*CQEIKR
Trigger: CCTCTTTATCTCCTGACACAAAATTAGAACCTTCAG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCCACAGGGTTTACTGTaGCCTGATCATTGGAATCAA +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISPQGLL*PDHWNQ
Trigger: TTGATTCCAATGATCAGGCAACAGTAAACCCTGTGG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAGCACGGCAACCCAAAATGACTGAACGGTGGTCCAAAAATCCAAACCAACTGACGATTAACAAACATTaGTTCTTCGTGAGACAGGAT +
Preference number: 5 (lower is better)
Translates to: GARQPKMTERWSKNPNQLTINKH*FFVRQD
Trigger: ATCCTGTCTCACGAAGAACAAATGTTTGTTAATCGT...CAGTTGGTTTGGATTTTTGGACCACCGTTCAGTCATTTTGGGTTGCCGTGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCATAGAATAAGTCCTTaGGTATGCAGATGGGTTCAT +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMHRISP*VCRWVH
Trigger: ATGAACCCATCTGCATACCAAAGGACTTATTCTATG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCAGGAAGTTAGGACTTaGGCTGAAATGATGAAAACA +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQQEVRT*AEMMKT
Trigger: TGTTTTCATCATTTCAGCCAAAGTCCTAACTTCCTG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGCAGGAAGTTAGGACTTaGGCTGAAATGATGAAAACA +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMQEVRT*AEMMKT
Trigger: TGTTTTCATCATTTCAGCCAAAGTCCTAACTTCCTG...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAAGAAGAGTTCGACATaGGAGTCCTTAGTTCCATCA +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASEKKSST*ESLVPS
Trigger: TGATGGAACTAAGGACTCCAATGTCGAACTCTTCTT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAATTGGGCCAATCCCTTaGTGCCCTTTTTCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASEIGPIP*CPFSLF
Trigger: AAAAAGAGAAAAAGGGCACAAAGGGATTGGCCCAAT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS TCA 90 bp GAACATCAGCAGAGCCCTCAAATGTTTCCTCAGTTAAAGAAAGGTTaGCAGCTGCCTCATAGATCTCTTGAACTTGAGTGCTGTCATCAT +
Preference number: 5 (lower is better)
Translates to: EHQQSPQMFPQLKKG*QLPHRSLELECCHH
Trigger: ATGATGACAGCACTCAAGTTCAAGAGATCTATGAGGCAGCTGTCAACCTTTCTTTAACTGAGGAAACATTTGAGGGCTCTGCTGATGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS TCA 90 bp GGTGTTGCAACCTCAGTATTAAATTCCACAGGGTTTACTGTTGCCTaGTCATTGGAATCAAGAATTCTCGCTGCCACTTGCTGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: GVATSVLNSTGFTVA*SLESRILAATCCSD
Trigger: ATCAGAACAGCAAGTGGCAGCGAGAATTCTTGATTCCAATGATCAGGCAACAGTAAACCCTGTGGAATTTAATACTGAGGTTGCAACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000507162.1
ENST00000513016.5
CDS CCA 90 bp CATCTTCTGATGGAACAGAAGGTACTAACACTCCCCAGTCTGTCTTaGGAATTACAGAAAGAGGAATGGTATGGGAAGAGTCTACATAAG +
Preference number: 5 (lower is better)
Translates to: HLLMEQKVLTLPSLS*ELQKEEWYGKSLHK
Trigger: CTTATGTAGACTCTTCCCATACCATTCCTCTTTCTGTAATTCCCAAGACAGACTGGGGAGTGTTAGTACCTTCTGTTCCATCAGAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGGGTTACTATTAAGGTaGAACACATCCATAAGATGC +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASEGLLLR*NTSIRC
Trigger: GCATCTTATGGATGTGTTCAACCTTAATAGTAACCC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GGATTTAACTCAGCCTCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGGGGCTTTTTCCCACTTaGACTTTATGTAGCGCATGG +
Preference number: 5 (lower is better)
Translates to: GFNSASVGLGIVTPINKLGLFPT*TLCSAW
Trigger: CCATGCGCTACATAAAGTCAAAGTGGGAAAAAGCCC...CAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGAGGCTGAGTTAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAACCGATTCTTGTGTTaGTTTATCTTCCACGACACC +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISNRFLC*FIFHDT
Trigger: GGTGTCGTGGAAGATAAACAAACACAAGAATCGGTT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAATTCCAGGATCATTCTaGCAGTTACCAATGGTGTTT +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASEIPGSF*QLPMVF
Trigger: AAACACCATTGGTAACTGCAAGAATGATCCTGGAAT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAATGACTTCAGGAATTaGGTCAAAGATCAAGGTGCT +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASENDFRN*VKDQGA
Trigger: AGCACCTTGATCTTTGACCAAATTCCTGAAGTCATT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCCTTTAGCATCATGGTAGACTCTAAAGGCTaGGATGTTGTATTATCTTCA +
Preference number: 5 (lower is better)
Translates to: DIGVLSSIRIPFAAFSIMVDSKG*DVVLSS
Trigger: TGAAGATAATACAACATCCAAGCCTTTAGAGTCTAC...CATGATGCTAAAGGCTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGGTGTTACTGCCTCCTaGGGAGTCCAAGCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCGVTAS*GVQAVE
Trigger: TTCTACAGCTTGGACTCCCAAGGAGGCAGTAACACC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTTTTTCCAACTGGAGTaGTTTCTAAAACTGGGACCC +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISFFQLE*FLKLGP
Trigger: GGGTCCCAGTTTTAGAAACAACTCCAGTTGGAAAAA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGACTTAAAGATACTTTaGGCCCAATGCGTGGTGTTA +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISDLKIL*AQCVVL
Trigger: TAACACCACGCATTGGGCCAAAAGTATCTTTAAGTC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTCGGTTTCTGTTTCCTaGGCTACAATATCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISSVSVS*ATISSR
Trigger: CCTTGAAGATATTGTAGCCAAGGAAACAGAAACCGA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCTGTCAGGGTGAAATTTaGTGCTTGCTGGGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCCQGEI*CLLGAV
Trigger: CACAGCCCCCAGCAAGCACAAAATTTCACCCTGACA...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGCACTTTTGCAGAAGGTaGTTCAGAAACTGGATAAAT +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQHFCRR*FRNWIN
Trigger: ATTTATCCAGTTTCTGAACAACCTTCTGCAAAAGTG...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCTTCTATCAATTTCATaGACAGTACCCACTTCTCCC +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISLLSIS*TVPTSP
Trigger: GGGAGAAGTGGGTACTGTCAATGAAATTGATAGAAG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATGCCTAGACCATAATTaGGCTGGCTCTATAGTTTGG +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPCLDHN*AGSIVW
Trigger: CCAAACTATAGAGCCAGCCAAATTATGGTCTAGGCA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGTTCACTTTCAATTTCTaGTCTTACAGGGTTGACTTC +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQFTFNF*SYRVDF
Trigger: GAAGTCAACCCTGTAAGACAAGAAATTGAAAGTGAA...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAGATTGTTTGTTCTGTaGCAGGAGAGTTTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPRLFVL*QESFEG
Trigger: CCCCTCAAAACTCTCCTGCAACAGAACAAACAATCT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATCTGTGAATCAAAGATaGTTTGTTCTGTTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASESVNQR*FVLLQE
Trigger: CTCCTGCAACAGAACAAACAATCTTTGATTCACAGA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACTGACTCTTGAATTGTaGGTCTCATGCCTTTCGGAA +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPLTLEL*VSCLSE
Trigger: TTCCGAAAGGCATGAGACCAACAATTCAAGAGTCAG...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACTTCAATTTTGTCACTaGAGGTACTTTCCACTTGAG +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASELQFCH*RYFPLE
Trigger: CTCAAGTGGAAAGTACCTCAAGTGACAAAATTGAAG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTCCTGACAGTCTGATTTaGAGGATGTCCGATGTCCGT +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISPDSLI*RMSDVR
Trigger: ACGGACATCGGACATCCTCAAAATCAGACTGTCAGG...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATTGTTCAGTTATGGTTaGTGGTCTACTAGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASELFSYG*WSTSLD
Trigger: ATCCAGACTAGTAGACCACAAACCATAACTGAACAA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTGAATTGGCAGGGATGTaGCCGTGGGAAGTAAAACGT +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISELAGM*PWEVKR
Trigger: ACGTTTTACTTCCCACGGCAACATCCCTGCCAATTC...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATGGTGGGAAACATCTaGATTGCTTCTCCAGAAACT +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISMVGNI*IASPET
Trigger: AGTTTCTGGAGAAGCAATCAAGATGTTTCCCACCAT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GCAAAGAAGAGTTCGACATTGGAGTCCTTAGTTCCATCAGGATCCCATTCGCAGACGATTAACAAACATTaGTTCTTCGTGAGACAGGAT +
Preference number: 5 (lower is better)
Translates to: AKKSSTLESLVPSGSHSQTINKH*FFVRQD
Trigger: ATCCTGTCTCACGAAGAACAAATGTTTGTTAATCGT...CTGCGAATGGGATCCTGATGGAACTAAGGACTCCAATGTCGAACTCTTCTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATCATGCTCAAACATCTaGTCATTGAGGCCTATCCAC +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPSCSNI*SLRPIH
Trigger: GTGGATAGGCCTCAATGACAAGATGTTTGAGCATGA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGTTGGAAGGTGACGTaGAATGAAACCATCTTTGCA +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISSWKVT*NETIFA
Trigger: TGCAAAGATGGTTTCATTCAACGTCACCTTCCAACT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACATAGAATAAGTCCTTaGGTATGCAGATGGGTTCAT +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASEHRISP*VCRWVH
Trigger: ATGAACCCATCTGCATACCAAAGGACTTATTCTATG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAACAGGAAGTTAGGACTTaGGCTGAAATGATGAAAACA +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASEQEVRT*AEMMKT
Trigger: TGTTTTCATCATTTCAGCCAAAGTCCTAACTTCCTG...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS TCA 90 bp AGACTTGGTCATTTCCACAGAAGACTCTGTAACATGAATTGGCTCTaGGAGAGATGTAGAGAGTTTCATCCCAGAGAAGACTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RLGHFHRRLCNMNWL*ERCREFHPREDFFF
Trigger: GAAGAAGAAGTCTTCTCTGGGATGAAACTCTCTACATCTCTCTCAGAGCCAATTCATGTTACAGAGTCTTCTGTGGAAATGACCAAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS TCA 90 bp GGGAAATCAAAAGACTTGGTCATTTCCACAGAAGACTCTGTAACATaGATTGGCTCTGAGAGAGATGTAGAGAGTTTCATCCCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: GKSKDLVISTEDSVT*IGSERDVESFIPEK
Trigger: CTTCTCTGGGATGAAACTCTCTACATCTCTCTCAGAGCCAATTCATGTTACAGAGTCTTCTGTGGAAATGACCAAGTCTTTTGATTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS TCA 90 bp GGAACTGGTTTCTCTGCAGTCTGTTCTTTCCAAGGGAATTCTTCCTaGGTTGTTCCCTCTGTGATTTTTGTTGTTCTCATAGTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: GTGFSAVCSFQGNSS*VVPSVIFVVLIVSG
Trigger: TCCAGAAACTATGAGAACAACAAAAATCACAGAGGGAACAACTCAGGAAGAATTCCCTTGGAAAGAACAGACTGCAGAGAAACCAGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS TCA 90 bp GTTTCCACATGCGGAGACAAAGTGCCAGCTACTTCCTTTTCGGCTTaGATTGCATACTCTACGTTTAATGAAAATGAAGAAACAGTGGTG +
Preference number: 5 (lower is better)
Translates to: VSTCGDKVPATSFSA*IAYSTFNENEETVV
Trigger: CACCACTGTTTCTTCATTTTCATTAAACGTAGAGTATGCAATTCAAGCCGAAAAGGAAGTAGCTGGCACTTTGTCTCCGCATGTGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS TCA 90 bp AATGTTGTGCTGGTTACTGACCCACTACCTTCAAAGATGTCTGTTTaGGATACGAGTGGTCCAACTTCTTTTGCCACATTTTCCATTCTG +
Preference number: 5 (lower is better)
Translates to: NVVLVTDPLPSKMSV*DTSGPTSFATFSIL
Trigger: CAGAATGGAAAATGTGGCAAAAGAAGTTGGACCACTCGTATCTCAAACAGACATCTTTGAAGGTAGTGGGTCAGTAACCAGCACAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS CCA 90 bp GCTTGGATGTTGTATTATCTTCATCCCATGACCATTTTGATACAGTaGCTGCTTCAACACTTAAAGTACCATGGGCCAAAAGCACTGTTG +
Preference number: 5 (lower is better)
Translates to: AWMLYYLHPMTILIQ*LLQHLKYHGPKALL
Trigger: CAACAGTGCTTTTGGCCCATGGTACTTTAAGTGTTGAAGCAGCCACTGTATCAAAATGGTCATGGGATGAAGATAATACAACATCCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CCA 90 bp CAAATGTTGAAACTGCTAATGTTGTATCAGTGTAATATGGGGGATTaGATCCTTCCATCACATCAGGCACCTCTGTTACACTCTGATCCA +
Preference number: 5 (lower is better)
Translates to: QMLKLLMLYQCNMGD*ILPSHQAPLLHSDP
Trigger: TGGATCAGAGTGTAACAGAGGTGCCTGATGTGATGGAAGGATCCAATCCCCCATATTACACTGATACAACATTAGCAGTTTCAACATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCATGAACATCTTGGCCTaGGAAGGCGGCTTATTGCAG +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCMNILA*EGGLLQ
Trigger: CTGCAATAAGCCGCCTTCCAAGGCCAAGATGTTCAT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTGGGCTTTTTCCCACTTaGACTTTATGTAGCGCATGG +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISGLFPT*TLCSAW
Trigger: CCATGCGCTACATAAAGTCAAAGTGGGAAAAAGCCC...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GCACAGTTACAGCTTAACCTGATATTTCCTCACCCCTCTAAAAATCCATTTGCCCTTGATATTTCCATTTaGGGCCACAAGGACAGTAGT +
Preference number: 5 (lower is better)
Translates to: AQLQLNLIFPHPSKNPFALDISI*GHKDSS
Trigger: ACTACTGTCCTTGTGGCCCAAAATGGAAATATCAAG...GGCAAATGGATTTTTAGAGGGGTGAGGAAATATCAGGTTAAGCTGTAACTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCTGTGATAGCCTGAGGTaGGACTGTGGCTTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCCDSLR*DCGFLF
Trigger: GAACAGAAAGCCACAGTCCAACCTCAGGCTATCACA...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAATGAGAGACGCCAGTaGTACTCTGGAGCACTTCTT +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISNERRQ*YSGALL
Trigger: AAGAAGTGCTCCAGAGTACAACTGGCGTCTCTCATT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGTAGTAGACAGATATTaGCCAAGAAACTCTTCCGTT +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISVVDRY*PRNSSV
Trigger: AACGGAAGAGTTTCTTGGCAAATATCTGTCTACTAC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCTAAAGGCTTGGATGTaGTATTATCTTCATCCCATG +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISLKAWM*YYLHPM
Trigger: CATGGGATGAAGATAATACAACATCCAAGCCTTTAG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGTAGACTCTAAAGGCTaGGATGTTGTATTATCTTCA +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASEVDSKG*DVVLSS
Trigger: TGAAGATAATACAACATCCAAGCCTTTAGAGTCTAC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTCACTTCCTTCCATGGTaGCATAAACTTGGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISHFLPW*HKLGLQ
Trigger: CTGAAGGCCAAGTTTATGCAACCATGGAAGGAAGTG...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATAAGTAGTAGGCTCTaGGGTGCTACTATAACTAAC +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISISSRL*GATITN
Trigger: GTTAGTTATAGTAGCACCCAAGAGCCTACTACTTAT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATTTTTCCAACTGGAGTaGTTTCTAAAACTGGGACCC +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPFFQLE*FLKLGP
Trigger: GGGTCCCAGTTTTAGAAACAACTCCAGTTGGAAAAA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATCATCTGTTTTCACTTaGTGCTCAGTTACAGCACCT +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPSSVFT*CSVTAP
Trigger: AGGTGCTGTAACTGAGCACAAAGTGAAAACAGATGA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAGTACTTTCTTCCTTTTaGATTGGTGAATCTGTGACT +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASEVLSSF*IGESVT
Trigger: AGTCACAGATTCACCAATCAAAAAGGAAGAAAGTAC...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATATCTGACTCTTGAATaGTTGGTCTCATGCCTTTCG +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPYLTLE*LVSCLS
Trigger: CGAAAGGCATGAGACCAACAATTCAAGAGTCAGATA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGTGGTCCAACTTCTTTaGCCACATTTTCCATTCTGT +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPVVQLL*PHFPFC
Trigger: ACAGAATGGAAAATGTGGCAAAAGAAGTTGGACCAC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAAAATTTCTATTAATGTaGTGCTGGTTACTGACCCAC +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASEKFLLM*CWLLTH
Trigger: GTGGGTCAGTAACCAGCACAACATTAATAGAAATTT...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGAATTGGCAGGGATGTaGCCGTGGGAAGTAAAACGT +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCELAGM*PWEVKR
Trigger: ACGTTTTACTTCCCACGGCAACATCCCTGCCAATTC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp AGCTGTCCAGGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAATTGAAACTGCTAATGTaGTATCAGTGTAATATGGGG +
Preference number: 5 (lower is better)
Translates to: SCPGKAIFSLADSQRASELKLLM*YQCNMG
Trigger: CCCCATATTACACTGATACAACATTAGCAGTTTCAA...TTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCCTGGACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCTGAAGGTTCTAATTTaGTGTCAGGAGATAAAGAGG +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISLKVLI*CQEIKR
Trigger: CCTCTTTATCTCCTGACACAAAATTAGAACCTTCAG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATGCTTCTCCAGAAACTaGACCATCGGTTTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPCFSRN*TIGFVL
Trigger: CAAAACAAAACCGATGGTCAAGTTTCTGGAGAAGCA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAAGTTGGAAGGTGACGTaGAATGAAACCATCTTTGCA +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPSWKVT*NETIFA
Trigger: TGCAAAGATGGTTTCATTCAACGTCACCTTCCAACT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAATTGGGCCAATCCCTTaGTGCCCTTTTTCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPIGPIP*CPFSLF
Trigger: AAAAAGAGAAAAAGGGCACAAAGGGATTGGCCCAAT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS TCA 90 bp CCATGGGCTGCTATGTCTTCATCAGTAACCTCCTCTAACTGCTTTTaGGTACTATCTGGAATAAGAGTAAATTCATCTGCTCCATCTTCA +
Preference number: 5 (lower is better)
Translates to: PWAAMSSSVTSSNCF*VLSGIRVNSSAPSS
Trigger: TGAAGATGGAGCAGATGAATTTACTCTTATTCCAGATAGTACTCAAAAGCAGTTAGAGGAGGTTACTGATGAAGACATAGCAGCCCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS TCA 90 bp TGCAAAGGCTATTTTCTGAGATTCTTGGTCAATGGCAATCTCTCCTaGAGACTCTTCAGGAAACAGAGATACAGGTTCAGTATGTTCATG +
Preference number: 5 (lower is better)
Translates to: CKGYFLRFLVNGNLS*RLFRKQRYRFSMFM
Trigger: CATGAACATACTGAACCTGTATCTCTGTTTCCTGAAGAGTCTTCAGGAGAGATTGCCATTGACCAAGAATCTCAGAAAATAGCCTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS TCA 90 bp AATTGGCCCAATGTTGGTATTATTTCACTTTGGTCTGCAATAGCTTaGCCATCAGACAAAGTGCTTGATTCAAACATGTCATCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: NWPNVGIISLWSAIA*PSDKVLDSNMSSRA
Trigger: AGCCCTGGATGACATGTTTGAATCAAGCACTTTGTCTGATGGTCAAGCTATTGCAGACCAAAGTGAAATAATACCAACATTGGGCCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS CCA 90 bp TACCACTTCATCTGTTTTCACTTTGTGCTCAGTTACAGCACCTGGTaGATAAGACACACTGTGATCAATTTTTCCAACTGGAGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: YHFICFHFVLSYSTW*IRHTVINFSNWSCF
Trigger: GAAACAACTCCAGTTGGAAAAATTGATCACAGTGTGTCTTATCCACCAGGTGCTGTAACTGAGCACAAAGTGAAAACAGATGAAGTGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CCA 90 bp TGTTACCACTTCATCTGTTTTCACTTTGTGCTCAGTTACAGCACCTaGTGGATAAGACACACTGTGATCAATTTTTCCAACTGGAGTTGT +
Preference number: 5 (lower is better)
Translates to: CYHFICFHFVLSYST*WIRHTVINFSNWSC
Trigger: ACAACTCCAGTTGGAAAAATTGATCACAGTGTGTCTTATCCACCAGGTGCTGTAACTGAGCACAAAGTGAAAACAGATGAAGTGGTAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CCA 90 bp ATGGAAAAACAAGAGAGCTTTATTTATAGCCCTTTTACATTGCAATaGCATCCTCTACCTACTGTGGCACTGAGACATGAGCTTAACCAC +
Preference number: 5 (lower is better)
Translates to: MEKQESFIYSPFTLQ*HPLPTVALRHELNH
Trigger: GTGGTTAAGCTCATGTCTCAGTGCCACAGTAGGTAGAGGATGCCATTGCAATGTAAAAGGGCTATAAATAAAGCTCTCTTGTTTTTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513016.5
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGGGTTACTATTAAGGTaGAACACATCCATAAGATGC +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPGLLLR*NTSIRC
Trigger: GCATCTTATGGATGTGTTCAACCTTAATAGTAACCC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGGGCTTTTTCCCACTTaGACTTTATGTAGCGCATGG +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCGLFPT*TLCSAW
Trigger: CCATGCGCTACATAAAGTCAAAGTGGGAAAAAGCCC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATCAATCTTAGACCATTaGATGCGGAGAAATTCACTG +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPSILDH*MRRNSL
Trigger: CAGTGAATTTCTCCGCATCAAATGGTCTAAGATTGA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000512590.6
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACTGTGTAACCGATTCTaGTGTTTGTTTATCTTCCAC +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPLCNRF*CLFIFH
Trigger: GTGGAAGATAAACAAACACAAGAATCGGTTACACAG...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAATTCCAGGATCATTCTaGCAGTTACCAATGGTGTTT +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPIPGSF*QLPMVF
Trigger: AAACACCATTGGTAACTGCAAGAATGATCCTGGAAT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTATCCTACCACTAGTTaGTCTCTCTTCCCAGTCATC +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISYPTTS*SLFPVI
Trigger: GATGACTGGGAAGAGAGACAAACTAGTGGTAGGATA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAGTAGTAGACAGATATTaGCCAAGAAACTCTTCCGTT +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPVVDRY*PRNSSV
Trigger: AACGGAAGAGTTTCTTGGCAAATATCTGTCTACTAC...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCGTAGACTCTAAAGGCTaGGATGTTGTATTATCTTCA +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISVDSKG*DVVLSS
Trigger: TGAAGATAATACAACATCCAAGCCTTTAGAGTCTAC...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCCACTTTTGCAGAAGGTaGTTCAGAAACTGGATAAAT +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISHFCRR*FRNWIN
Trigger: ATTTATCCAGTTTCTGAACAACCTTCTGCAAAAGTG...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTTTCTGCCCCATAATTaGGTTCTCCTAATCGCTCTG +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISFLPHN*VLLIAL
Trigger: CAGAGCGATTAGGAGAACCAAATTATGGGGCAGAAA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATTCTTGTTAGAGTCTaGTTCAGTTATGGTTTGTGG +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISILVRV*FSYGLW
Trigger: CCACAAACCATAACTGAACAAGACTCTAACAAGAAT...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACATCAGACAAAGTGCTaGATTCAAACATGTCATCCA +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPHQTKC*IQTCHP
Trigger: TGGATGACATGTTTGAATCAAGCACTTTGTCTGATG...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATGGTATTATTTCACTTaGGTCTGCAATAGCTTGACC +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPWYYFT*VCNSLT
Trigger: GGTCAAGCTATTGCAGACCAAAGTGAAATAATACCA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCACTGAGTCCTTTCAAATaGGCCCAATGTTGGTATTAT +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPLSPFK*AQCWYY
Trigger: ATAATACCAACATTGGGCCAATTTGAAAGGACTCAG...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GGAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCTTGAAACTGCTAATGTaGTATCAGTGTAATATGGGG +
Preference number: 5 (lower is better)
Translates to: GKAIFSLADSQRASETISLKLLM*YQCNMG
Trigger: CCCCATATTACACTGATACAACATTAGCAGTTTCAA...GGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCAACCATCGGTTTTGTTTaGGAAATCTTGGAGAATCTC +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPTIGFV*EILENL
Trigger: GAGATTCTCCAAGATTTCCAAAACAAAACCGATGGT...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCACATGTCTCGGTATCTaGCTCACAAAGTGCACCAAC +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCTCLGI*LTKCTN
Trigger: GTTGGTGCACTTTGTGAGCAAGATACCGAGACATGT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCTCTCCAATTCTCGTATaGCAGTGTGCTGCCATCAGT +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCSPILV*QCAAIS
Trigger: ACTGATGGCAGCACACTGCAATACGAGAATTGGAGA...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS TCA 90 bp TATTTCACTTTGGTCTGCAATAGCTTGACCATCAGACAAAGTGCTTaGTTCAAACATGTCATCCAGGGCTTTTGCTTCAGCTTTTATTCC +
Preference number: 5 (lower is better)
Translates to: YFTLVCNSLTIRQSA*FKHVIQGFCFSFYS
Trigger: GGAATAAAAGCTGAAGCAAAAGCCCTGGATGACATGTTTGAATCAAGCACTTTGTCTGATGGTCAAGCTATTGCAGACCAAAGTGAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS CCA 90 bp GTCCTTCTGCTCCAGTGTCACTTAAAATTTCTATTAATGTTGTGCTaGTTACTGACCCACTACCTTCAAAGATGTCTGTTTGAGATACGA +
Preference number: 5 (lower is better)
Translates to: VLLLQCHLKFLLMLC*LLTHYLQRCLFEIR
Trigger: TCGTATCTCAAACAGACATCTTTGAAGGTAGTGGGTCAGTAACCAGCACAACATTAATAGAAATTTTAAGTGACACTGGAGCAGAAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTCTTGATATTTCCATTTaGGGCCACAAGGACAGTAGT +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISLDISI*GHKDSS
Trigger: ACTACTGTCCTTGTGGCCCAAAATGGAAATATCAAG...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAACCGATTCTTGTGTTaGTTTATCTTCCACGACACC +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISNRFLC*FIFHDT
Trigger: GGTGTCGTGGAAGATAAACAAACACAAGAATCGGTT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAGGACCCACTTCTATTaGTTCAATCTGTGTAACCGA +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISRTHFY*FNLCNR
Trigger: TCGGTTACACAGATTGAACAAATAGAAGTGGGTCCT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTCGGTTTCTGTTTCCTaGGCTACAATATCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISSVSVS*ATISSR
Trigger: CCTTGAAGATATTGTAGCCAAGGAAACAGAAACCGA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTTACCGTTTCTTCTTTaGCTATGGGATGAGACACTG +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISLPFLL*LWDETL
Trigger: CAGTGTCTCATCCCATAGCAAAAGAAGAAACGGTAA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCTTCCACTTCTGCTGTaGGTAAAATGGTGGATCTTC +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCLPLLL*VKWWIF
Trigger: GAAGATCCACCATTTTACCAACAGCAGAAGTGGAAG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCTGCCTAGACCATAATTaGGCTGGCTCTATAGTTTGG +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCCLDHN*AGSIVW
Trigger: CCAAACTATAGAGCCAGCCAAATTATGGTCTAGGCA...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCTCTTGTCTTACAGGGTaGACTTCTTGCCTAGACCAT +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCSCLTG*TSCLDH
Trigger: ATGGTCTAGGCAAGAAGTCAACCCTGTAAGACAAGA...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTATCTGACTCTTGAATaGTTGGTCTCATGCCTTTCG +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISYLTLE*LVSCLS
Trigger: CGAAAGGCATGAGACCAACAATTCAAGAGTCAGATA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GAAAAGCCATCTTCAGTCTTGCTGACAGTCAAAGAGCAAGTGAAACCATTTCCATTTGTTTTGGAAATCTaGGAGAATCTCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: EKPSSVLLTVKEQVKPFPFVLEI*ENLSSF
Trigger: GAAGGAACTGAGATTCTCCAAGATTTCCAAAACAAA...TGGAAATGGTTTCACTTGCTCTTTGACTGTCAGCAAGACTGAAGATGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCTCATGCTCAAACATCTaGTCATTGAGGCCTATCCAC +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCSCSNI*SLRPIH
Trigger: GTGGATAGGCCTCAATGACAAGATGTTTGAGCATGA...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTGGGTTACTATTAAGGTaGAACACATCCATAAGATGC +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISGLLLR*NTSIRC
Trigger: GCATCTTATGGATGTGTTCAACCTTAATAGTAACCC...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTCAATCTTAGACCATTaGATGCGGAGAAATTCACTG +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISSILDH*MRRNSL
Trigger: CAGTGAATTTCTCCGCATCAAATGGTCTAAGATTGA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTCTGTGTAACCGATTCTaGTGTTTGTTTATCTTCCAC +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISLCNRF*CLFIFH
Trigger: GTGGAAGATAAACAAACACAAGAATCGGTTACACAG...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTATTCCAGGATCATTCTaGCAGTTACCAATGGTGTTT +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISIPGSF*QLPMVF
Trigger: AAACACCATTGGTAACTGCAAGAATGATCCTGGAAT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCGGGAAATCAAAAGACTaGGTCATTTCCACAGAAGAC +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCGKSKD*VISTED
Trigger: GTCTTCTGTGGAAATGACCAAGTCTTTTGATTTCCC...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTATAAGTAGTAGGCTCTaGGGTGCTACTATAACTAAC +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISISSRL*GATITN
Trigger: GTTAGTTATAGTAGCACCCAAGAGCCTACTACTTAT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCTTTTTCCAACTGGAGTaGTTTCTAAAACTGGGACCC +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCFFQLE*FLKLGP
Trigger: GGGTCCCAGTTTTAGAAACAACTCCAGTTGGAAAAA...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTATGAGTTCTGTGGCTTaGGGCTTTTCAAATAATCCT +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISMSSVA*GFSNNP
Trigger: AGGATTATTTGAAAAGCCCAAAGCCACAGAACTCAT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTGTAGATTCATTAGGTaGCACAGCAGTAGACAATTC +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISCRFIR*HSSRQF
Trigger: GAATTGTCTACTGCTGTGCAACCTAATGAATCTACA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTACTTCCTTTTCGGCTaGAATTGCATACTCTACGTT +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISYFLFG*NCILYV
Trigger: AACGTAGAGTATGCAATTCAAGCCGAAAAGGAAGTA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTTTGTTCAGTTATGGTTaGTGGTCTACTAGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISLFSYG*WSTSLD
Trigger: ATCCAGACTAGTAGACCACAAACCATAACTGAACAA...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCTGTCATCCAGGGCTTTaGCTTCAGCTTTTATTCCTT +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCCHPGL*LQLLFL
Trigger: AAGGAATAAAAGCTGAAGCAAAAGCCCTGGATGACA...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCTGCTTCTCCAGAAACTaGACCATCGGTTTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCCFSRN*TIGFVL
Trigger: CAAAACAAAACCGATGGTCAAGTTTCTGGAGAAGCA...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCAAGAAGAGTTCGACATaGGAGTCCTTAGTTCCATCA +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCKKSST*ESLVPS
Trigger: TGATGGAACTAAGGACTCCAATGTCGAACTCTTCTT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CAA 90 bp GACAAAATCAACAATCTTAAGGATTTAACTCAGCCTCAGTTGGCCTTGGCATTGTATGACTTGAACATTTaGAGTATCCATGTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: DKINNLKDLTQPQLALALYDLNI*SIHVSF
Trigger: GAAGCTGACATGGATACTCAAAATGTTCAAGTCATA...CAATGCCAAGGCCAACTGAGGCTGAGTTAAATCCTTAAGATTGTTGATTTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS TCA 90 bp TCTCTCAAAGTTGACTTTTCTGCAATACCAGTTGATGTAGTTGGCTaGAATCTAATTGTGAATTTTCCATGGGCTGCTATGTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: SLKVDFSAIPVDVVG*NLIVNFPWAAMSSS
Trigger: TGATGAAGACATAGCAGCCCATGGAAAATTCACAATTAGATTTCAGCCAACTACATCAACTGGTATTGCAGAAAAGTCAACTTTGAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS TCA 90 bp CACTGGATCTGTTTCTTCACTACAAGGTTCATCTTCTTTAGATTCTaGATCTATTGGATGACCAATTACACTCAAATCACTCATTCGACC +
Preference number: 5 (lower is better)
Translates to: HWICFFTTRFIFFRF*IYWMTNYTQITHST
Trigger: GGTCGAATGAGTGATTTGAGTGTAATTGGTCATCCAATAGATTCAGAATCTAAAGAAGATGAACCTTGTAGTGAAGAAACAGATCCAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000513016.5
CDS TCA 90 bp CACTGGATCTGTTTCTTCACTACAAGGTTCATCTTCTTTAGATTCTaGATCTATTGGATGACCAATTACACTCAAATCACTCATTCGACG +
Preference number: 5 (lower is better)
Translates to: HWICFFTTRFIFFRF*IYWMTNYTQITHST
Trigger: CGTCGAATGAGTGATTTGAGTGTAATTGGTCATCCAATAGATTCAGAATCTAAAGAAGATGAACCTTGTAGTGAAGAAACAGATCCAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343200.9
ENST00000513960.5
ENST00000515397.1
CDS GCA 90 bp GATCAGGTCCACTTAATGCTCAGAAACTGTTTTTCTTCGAAAGTGTaGACTGAAGTCTCTTCTGCTACATTAACATGCTTTTTCCAAAAA +
Preference number: 5 (lower is better)
Translates to: DQVHLMLRNCFSSKV*TEVSSATLTCFFQK
Trigger: TTTTTGGAAAAAGCATGTTAATGTAGCAGAAGAGACTTCAGTGCACACTTTCGAAGAAAAACAGTTTCTGAGCATTAAGTGGACCTGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507162.1
CDS GCA 90 bp TCCTCGAAAAGTATGTATCATCAGAATATTTCCCAGATTGTAAATTaGCATATGGTACCAACCACTAAGCTCAATGGCCTTTTCTGCTAT +
Preference number: 5 (lower is better)
Translates to: SSKSMYHQNISQIVN*HMVPTTKLNGLFCY
Trigger: ATAGCAGAAAAGGCCATTGAGCTTAGTGGTTGGTACCATATGGCAATTTACAATCTGGGAAATATTCTGATGATACATACTTTTCGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513016.5
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCTCAATCTTAGACCATTaGATGCGGAGAAATTCACTG +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCSILDH*MRRNSL
Trigger: CAGTGAATTTCTCCGCATCAAATGGTCTAAGATTGA...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
CDS-3UTR CAA 90 bp TCAGTTGGCCTTGGCATTGTAACACCAATAAACAAATTGCAAAACTTAAGGACTTCAATCTTAGACCATTaGATGCGGAGAAATTCACTG +
Preference number: 5 (lower is better)
Translates to: SVGLGIVTPINKLQNLRTSILDH*MRRNSL
Trigger: CAGTGAATTTCTCCGCATCAAATGGTCTAAGATTGA...AGTCCTTAAGTTTTGCAATTTGTTTATTGGTGTTACAATGCCAAGGCCAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCCTAAAGGCTTGGATGTaGTATTATCTTCATCCCATG +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCLKAWM*YYLHPM
Trigger: CATGGGATGAAGATAATACAACATCCAAGCCTTTAG...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCATGAGTTCTGTGGCTTaGGGCTTTTCAAATAATCCT +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCMSSVA*GFSNNP
Trigger: AGGATTATTTGAAAAGCCCAAAGCCACAGAACTCAT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000342785.8
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTATTCTTGTTAGAGTCTaGTTCAGTTATGGTTTGTGG +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISILVRV*FSYGLW
Trigger: CCACAAACCATAACTGAACAAGACTCTAACAAGAAT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTGCTGTTGAAGAATTCTaGTTAGAGTCTTGTTCAGTT +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISAVEEF*LESCSV
Trigger: AACTGAACAAGACTCTAACAAGAATTCTTCAACAGC...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CTCCACCTAACAGGAAGAAATGCCCACACTATTTCTATATATTCGCTCATTTCTAAATCCTTGTCCTCTTaGTCCAGGTCTATGATAATA +
Preference number: 5 (lower is better)
Translates to: LHLTGRNAHTISIYSLISKSLSS*SRSMII
Trigger: TATTATCATAGACCTGGACAAAGAGGACAAGGATTT...AGAAATGAGCGAATATATAGAAATAGTGTGGGCATTTCTTCCTGTTAGGTGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS-3UTR CAA 90 bp CCATCTCAAAGAAACAGAGTGATACCGAAGACAAAATCAACAATCTTAAGGATTGGGTTACTATTAAGGTaGAACACATCCATAAGATGC +
Preference number: 5 (lower is better)
Translates to: PSQRNRVIPKTKSTILRIGLLLR*NTSIRC
Trigger: GCATCTTATGGATGTGTTCAACCTTAATAGTAACCC...AATCCTTAAGATTGTTGATTTTGTCTTCGGTATCACTCTGTTTCTTTGAGATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS-3UTR CAA 90 bp CCACACTATTTCTATATATTCGCTCATTTCTTAGAATGGGCAAACACCTTTTGCAAATTTCTATTAATGTaGTGCTGGTTACTGACCCAC +
Preference number: 5 (lower is better)
Translates to: PHYFYIFAHFLEWANTFCKFLLM*CWLLTH
Trigger: GTGGGTCAGTAACCAGCACAACATTAATAGAAATTT...GCAAAAGGTGTTTGCCCATTCTAAGAAATGAGCGAATATATAGAAATAGTGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265077.8
ENST00000343200.9
CDS TCA 90 bp TTCTTCCATAAGCTGGGTAATGTGGGTACTAAAAGGACTCAAAGATaGTGTAAATCCTGTTGTACTACTACCTTCTGTTTCATATTTTTG +
Preference number: 5 (lower is better)
Translates to: FFHKLGNVGTKRTQR*CKSCCTTTFCFIFL
Trigger: CAAAAATATGAAACAGAAGGTAGTAGTACAACAGGATTTACATCATCTTTGAGTCCTTTTAGTACCCACATTACCCAGCTTATGGAAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS GCA 90 bp TCAATTATGTCAGGGAATTCAGGTAAAATTTCAGCCATTAGATCATaGACTGGATCTGTTTCTTCACTACAAGGTTCATCTTCTTTAGAT +
Preference number: 5 (lower is better)
Translates to: SIMSGNSGKISAIRS*TGSVSSLQGSSSLD
Trigger: ATCTAAAGAAGATGAACCTTGTAGTGAAGAAACAGATCCAGTGCATGATCTAATGGCTGAAATTTTACCTGAATTCCCTGACATAATTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
ENST00000515397.1
CDS-3UTR CAA 90 bp CCATCTCAAAGAAACAGAGTGATACCGAAGACAAAATCAACAATCTTAAGGATTTGCTGTTCAGTTTGCTaGCTTTTGAAAATCACTGAA +
Preference number: 5 (lower is better)
Translates to: PSQRNRVIPKTKSTILRICCSVC*LLKITE
Trigger: TTCAGTGATTTTCAAAAGCAAGCAAACTGAACAGCA...AATCCTTAAGATTGTTGATTTTGTCTTCGGTATCACTCTGTTTCTTTGAGATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513984.5
CDS GCA 72 bp GGAAGGATGCGGAGGGTGCGGGACGGTGCTGGAAGATaGGGGAGGATGCGGGGCTGGCCGAAGATCTTGGTC +
Preference number: 6 (lower is better)
Translates to: GRMRRVRDGAGR*GRMRGWPKILV
Trigger: GACCAAGATCTTCGGCCAGCCCCGCATCCTCCCGCATCTTCCAGCACCGTCCCGCACCCTCCGCATCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000503923.1
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS GCA 72 bp AAATTCACTGCAGCGCTGCGCGACTGGGTTCGGCGTTaGCCAGGCGGGTCACATAGGAAGCGTGGTGGCCCG +
Preference number: 6 (lower is better)
Translates to: KFTAALRDWVRR*PGGSHRKRGGP
Trigger: CGGGCCACCACGCTTCCTATGTGACCCGCCTGGGCAACGCCGAACCCAGTCGCGCAGCGCTGCAGTGAATTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000503923.1
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS CCA 72 bp TTCTCACCCCAAGTAGACCACCTCCACACTGGGCCCTaGCCACAGTCACAGGGTGGCGCACGCTGGCATCCG +
Preference number: 6 (lower is better)
Translates to: FSPQVDHLHTGP*PQSQGGARWHP
Trigger: CGGATGCCAGCGTGCGCCACCCTGTGACTGTGGCCAGGGCCCAGTGTGGAGGTGGTCTACTTGGGGTGAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
ENST00000515397.1
CDS GCA 72 bp CCACCCGTAATCGCACTGGTCAAAGCCGTTCCTCCATaGCGCCTGGAGTTCCCCCACTGTTGCCAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: PPVIALVKAVPP*RLEFPHCCQPG
Trigger: GCCAGGCTGGCAACAGTGGGGGAACTCCAGGCGGCATGGAGGAACGGCTTTGACCAGTGCGATTACGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
ENST00000515397.1
CDS CCA 72 bp TACAGGGTTCTCACCCCAAGTAGACCACCTCCACACTaGGCCCTGGCCACAGTCACAGGGTGGCGCACGCTG +
Preference number: 6 (lower is better)
Translates to: YRVLTPSRPPPH*ALATVTGWRTL
Trigger: CAGCGTGCGCCACCCTGTGACTGTGGCCAGGGCCCAGTGTGGAGGTGGTCTACTTGGGGTGAGAACCCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
ENST00000515397.1
CDS CCA 72 bp GATGAGCCGACGTCTATTCCTGGCAGAGCACTGGGCTaGGGGATCTCTGTGTGTCCAGAGGCTTCACTGCCT +
Preference number: 6 (lower is better)
Translates to: DEPTSIPGRALG*GISVCPEASLP
Trigger: AGGCAGTGAAGCCTCTGGACACACAGAGATCCCCCAGCCCAGTGCTCTGCCAGGAATAGACGTCGGCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS GCA 72 bp CAGCTCCTGTCCACAACACCTAATGTTCTCGGCTGTTaGGTCCGCACGCCTGGAGTTCTTCCCCAGAAAGGC +
Preference number: 6 (lower is better)
Translates to: QLLSTTPNVLGC*VRTPGVLPQKG
Trigger: GCCTTTCTGGGGAAGAACTCCAGGCGTGCGGACGCAACAGCCGAGAACATTAGGTGTTGTGGACAGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000503923.1
ENST00000512590.6
CDS GCA 72 bp GTACATGACGTCACAGCGGTAAAGACCCGCATCACTTaGCAGCAGCTTGACCACAGTGAGGGAGGCATCGCC +
Preference number: 6 (lower is better)
Translates to: VHDVTAVKTRIT*QQLDHSEGGIA
Trigger: GGCGATGCCTCCCTCACTGTGGTCAAGCTGCTGGCAAGTGATGCGGGTCTTTACCGCTGTGACGTCATGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS CCA 72 bp GAACATCTTGGCCTTGGAAGGCGGCTTATTGCAGTTTaGGGGGAAAATTCACTGCAGCGCTGCGCGACTGGG +
Preference number: 6 (lower is better)
Translates to: EHLGLGRRLIAV*GENSLQRCATG
Trigger: CCCAGTCGCGCAGCGCTGCAGTGAATTTTCCCCCCAAACTGCAATAAGCCGCCTTCCAAGGCCAAGATGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000503923.1
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS GCA 72 bp AGGTGCAACACTTTCAAACTGGCCACGCCTAGCTTCTaGAGCTTCTGGGTCCTTGGGCACAGTGGTAACGAG +
Preference number: 6 (lower is better)
Translates to: RCNTFKLATPSF*SFWVLGHSGNE
Trigger: CTCGTTACCACTGTGCCCAAGGACCCAGAAGCTGCAGAAGCTAGGCGTGGCCAGTTTGAAAGTGTTGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS GCA 72 bp CCTGCAGACGGCATTCCCGTTCAGCTGCATCCCATGTaGGTCGATGGGCAAAGTATTTGTAGCACTGCCCTT +
Preference number: 6 (lower is better)
Translates to: PADGIPVQLHPM*VDGQSICSTAL
Trigger: AAGGGCAGTGCTACAAATACTTTGCCCATCGACGCACATGGGATGCAGCTGAACGGGAATGCCGTCTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000505615.1
ENST00000507162.1
ENST00000512590.6
ENST00000513016.5
CDS GCA 72 bp GAGATGGGCACCCTGCAGACGGCATTCCCGTTCAGCTaGATCCCATGTGCGTCGATGGGCAAAGTATTTGTA +
Preference number: 6 (lower is better)
Translates to: EMGTLQTAFPFS*IPCASMGKVFV
Trigger: TACAAATACTTTGCCCATCGACGCACATGGGATGCAGCTGAACGGGAATGCCGTCTGCAGGGTGCCCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000505615.1
ENST00000512590.6
ENST00000513016.5
CDS GCA 72 bp ATAGGCAGCAAAGAGCTGCTCTGGAGTTGCTATGACTaGCCCAACGTCCAAACAAGCCTTCTGAGCAGCCTC +
Preference number: 6 (lower is better)
Translates to: IGSKELLWSCYD*PNVQTSLLSSL
Trigger: GAGGCTGCTCAGAAGGCTTGTTTGGACGTTGGGGCAGTCATAGCAACTCCAGAGCAGCTCTTTGCTGCCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS TCA 72 bp GTGACACCGTGTCTTGTGTGTCTTCAATCCCGTACATaGCGTCACAGCGGTAAAGACCCGCATCACTTGCCA +
Preference number: 6 (lower is better)
Translates to: VTPCLVCLQSRT*RHSGKDPHHLP
Trigger: TGGCAAGTGATGCGGGTCTTTACCGCTGTGACGTCATGTACGGGATTGAAGACACACAAGACACGGTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS TCA 72 bp CTTCATAGGCAGCAAAGAGCTGCTCTGGAGTTGCTATaGCTGCCCCAACGTCCAAACAAGCCTTCTGAGCAG +
Preference number: 6 (lower is better)
Translates to: LHRQQRAALELL*LPQRPNKPSEQ
Trigger: CTGCTCAGAAGGCTTGTTTGGACGTTGGGGCAGTCATAGCAACTCCAGAGCAGCTCTTTGCTGCCTATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS GCA 72 bp CTGAGCAGCCTCAAAATTCAGTGTGTACCTGCTGGTTaGCGCCCTGTAGTGAAACACAACCCCATCCACAGT +
Preference number: 6 (lower is better)
Translates to: LSSLKIQCVPAG*RPVVKHNPIHS
Trigger: ACTGTGGATGGGGTTGTGTTTCACTACAGGGCGGCAACCAGCAGGTACACACTGAATTTTGAGGCTGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS GCA 72 bp GCAGCTTCTGGGTCCTTGGGCACAGTGGTAACGAGATaGTTCCCATTTATGTACTGCACAGATGGGGTGGTT +
Preference number: 6 (lower is better)
Translates to: AASGSLGTVVTR*FPFMYCTDGVV
Trigger: AACCACCCCATCTGTGCAGTACATAAATGGGAAGCATCTCGTTACCACTGTGCCCAAGGACCCAGAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS CCA 72 bp CCTTCTGAGCAGCCTCAAAATTCAGTGTGTACCTGCTaGTTGCCGCCCTGTAGTGAAACACAACCCCATCCA +
Preference number: 6 (lower is better)
Translates to: PSEQPQNSVCTC*LPPCSETQPHP
Trigger: TGGATGGGGTTGTGTTTCACTACAGGGCGGCAACCAGCAGGTACACACTGAATTTTGAGGCTGCTCAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS CCA 72 bp AATGTCAGGGTGAAATTTTGTGCTTGCTGGGGGCTGTaGCGTAGAAAGCGCCTGAGGTCCAAAGGCCTCTTT +
Preference number: 6 (lower is better)
Translates to: NVRVKFCACWGL*RRKRLRSKGLF
Trigger: AAAGAGGCCTTTGGACCTCAGGCGCTTTCTACGCCACAGCCCCCAGCAAGCACAAAATTTCACCCTGACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CAA 72 bp TCTGAGCAGCCTCAAAATTCAGTGTGTACCTGCTGGTaGCCGCCCTGTAGTGAAACACAACCCCATCCACAG +
Preference number: 6 (lower is better)
Translates to: SEQPQNSVCTCW*PPCSETQPHPQ
Trigger: CTGTGGATGGGGTTGTGTTTCACTACAGGGCGGCAACCAGCAGGTACACACTGAATTTTGAGGCTGCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS CAA 72 bp TCGCCCTCTTGTTCATCCAGTGGTGTTACTGCCTCCTaGGGAGTCCAAGCTGTAGAACTGAGAGCAGGAACT +
Preference number: 6 (lower is better)
Translates to: SPSCSSSGVTAS*GVQAVELRAGT
Trigger: AGTTCCTGCTCTCAGTTCTACAGCTTGGACTCCCAAGGAGGCAGTAACACCACTGGATGAACAAGAGGGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CAA 90 bp GCTGATCCATCGCCCTCTTGTTCATCCAGTGGTGTTACTGCCTCCTaGGGAGTCCAAGCTGTAGAACTGAGAGCAGGAACTGGTTTCTCT +
Preference number: 6 (lower is better)
Translates to: ADPSPSCSSSGVTAS*GVQAVELRAGTGFS
Trigger: AGAGAAACCAGTTCCTGCTCTCAGTTCTACAGCTTGGACTCCCAAGGAGGCAGTAACACCACTGGATGAACAAGAGGGCGATGGATCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CAA 90 bp AACAAGCCTTCTGAGCAGCCTCAAAATTCAGTGTGTACCTGCTGGTaGCCGCCCTGTAGTGAAACACAACCCCATCCACAGTCAGTGACA +
Preference number: 6 (lower is better)
Translates to: NKPSEQPQNSVCTCW*PPCSETQPHPQSVT
Trigger: TGTCACTGACTGTGGATGGGGTTGTGTTTCACTACAGGGCGGCAACCAGCAGGTACACACTGAATTTTGAGGCTGCTCAGAAGGCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS TCA 72 bp CGCCCTGTAGTGAAACACAACCCCATCCACAGTCAGTaGCACCGTGTCTTGTGTGTCTTCAATCCCGTACAT +
Preference number: 6 (lower is better)
Translates to: RPVVKHNPIHSQ*HRVLCVFNPVH
Trigger: ATGTACGGGATTGAAGACACACAAGACACGGTGTCACTGACTGTGGATGGGGTTGTGTTTCACTACAGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS TCA 72 bp TCGGGGCAGCTCGCCTGCAAGTTCAAATGCGGGTTGTaGCACCCATCATCATTATATCACTGTACCGTCAGA +
Preference number: 6 (lower is better)
Translates to: SGQLACKFKCGL*HPSSLYHCTVR
Trigger: TCTGACGGTACAGTGATATAATGATGATGGGTGTCACAACCCGCATTTGAACTTGCAGGCGAGCTGCCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342785.8
ENST00000343200.9
ENST00000503923.1
CDS GCA 72 bp AAGCCTTCTGAGCAGCCTCAAAATTCAGTGTGTACCTaGTGGTTGCCGCCCTGTAGTGAAACACAACCCCAT +
Preference number: 6 (lower is better)
Translates to: KPSEQPQNSVCT*WLPPCSETQPH
Trigger: ATGGGGTTGTGTTTCACTACAGGGCGGCAACCAGCAGGTACACACTGAATTTTGAGGCTGCTCAGAAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS GCA 72 bp TCCATCTTCATAGGCAGCAAAGAGCTGCTCTGGAGTTaGTATGACTGCCCCAACGTCCAAACAAGCCTTCTG +
Preference number: 6 (lower is better)
Translates to: SIFIGSKELLWS*YDCPNVQTSLL
Trigger: CAGAAGGCTTGTTTGGACGTTGGGGCAGTCATAGCAACTCCAGAGCAGCTCTTTGCTGCCTATGAAGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS CAA 72 bp CAGTCTTCTCCAGCAGAAAAGAAGCTGTCTGGCTGGTaGGGTCTCCAATTCTCGTATTGCAGTGTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: QSSPAEKKLSGW*GLQFSYCSVLP
Trigger: TGGCAGCACACTGCAATACGAGAATTGGAGACCCAACCAGCCAGACAGCTTCTTTTCTGCTGGAGAAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000505615.1
ENST00000512590.6
ENST00000513016.5
CDS TCA 72 bp GTTGCTATGACTGCCCCAACGTCCAAACAAGCCTTCTaGGCAGCCTCAAAATTCAGTGTGTACCTGCTGGTT +
Preference number: 6 (lower is better)
Translates to: VAMTAPTSKQAF*AASKFSVYLLV
Trigger: AACCAGCAGGTACACACTGAATTTTGAGGCTGCTCAGAAGGCTTGTTTGGACGTTGGGGCAGTCATAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS TCA 72 bp GCTCTGGATAGGCGGGCTCTATTGGAAATAGCTCACTaGAAGGACCAGAAAGAGCCTTCCACACCTATAGAC +
Preference number: 6 (lower is better)
Translates to: ALDRRALLEIAH*KDQKEPSTPID
Trigger: GTCTATAGGTGTGGAAGGCTCTTTCTGGTCCTTTCAGTGAGCTATTTCCAATAGAGCCCGCCTATCCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513016.5
CDS CCA 72 bp CTCAAATCCATCTTCATAGGCAGCAAAGAGCTGCTCTaGAGTTGCTATGACTGCCCCAACGTCCAAACAAGC +
Preference number: 6 (lower is better)
Translates to: LKSIFIGSKELL*SCYDCPNVQTS
Trigger: GCTTGTTTGGACGTTGGGGCAGTCATAGCAACTCCAGAGCAGCTCTTTGCTGCCTATGAAGATGGATTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS CCA 72 bp GGTTGTTTCTTCACCAGGTTCCCTGTCGATGAGAGGTaGTTTCTTAGTGATCGCGGAAGATGGCTTGAATGC +
Preference number: 6 (lower is better)
Translates to: GCFFTRFPVDER*FLSDRGRWLEC
Trigger: GCATTCAAGCCATCTTCCGCGATCACTAAGAAACCACCTCTCATCGACAGGGAACCTGGTGAAGAAACAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CCA 72 bp TGTTGGGAATCCATCAGCAGTAACAGCTTTAGCGCTTaGCACCTCAGGATGTTTTTCCAGGGACCCATCAGA +
Preference number: 6 (lower is better)
Translates to: CWESISSNSFSA*HLRMFFQGPIR
Trigger: TCTGATGGGTCCCTGGAAAAACATCCTGAGGTGCCAAGCGCTAAAGCTGTTACTGCTGATGGATTCCCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS CCA 72 bp AGTCTTCTCCAGCAGAAAAGAAGCTGTCTGGCTGGTTaGGTCTCCAATTCTCGTATTGCAGTGTGCTGCCAT +
Preference number: 6 (lower is better)
Translates to: SLLQQKRSCLAG*VSNSRIAVCCH
Trigger: ATGGCAGCACACTGCAATACGAGAATTGGAGACCCAACCAGCCAGACAGCTTCTTTTCTGCTGGAGAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000505615.1
ENST00000512590.6
ENST00000513016.5
CDS CAA 90 bp TCCCAATCCTTCGTCGATAATGGAGGAAGCTGTACCAGAAAACTTTaGCACAGCACTGGGAAGCACTGGAACAACAGAGCTGCTGACTGT +
Preference number: 6 (lower is better)
Translates to: SQSFVDNGGSCTRKL*HSTGKHWNNRAADC
Trigger: ACAGTCAGCAGCTCTGTTGTTCCAGTGCTTCCCAGTGCTGTGCAAAAGTTTTCTGGTACAGCTTCCTCCATTATCGACGAAGGATTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS TCA 72 bp CAGCGCCTCGACTCCTGCCACCTCCGGCTCCAACGATaGTCATGTTTGGATGTATTTATTGAATTGTCCTTT +
Preference number: 6 (lower is better)
Translates to: QRLDSCHLRLQR*SCLDVFIELSF
Trigger: AAAGGACAATTCAATAAATACATCCAAACATGATCATCGTTGGAGCCGGAGGTGGCAGGAGTCGAGGCGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513016.5
CDS GCA 72 bp ATCATAGAGGCATTCAACTGTCCTAGAACAGGGTCCTaGCACTGCAGCTGCCTTACTTTCAGTGACAAAGCA +
Preference number: 6 (lower is better)
Translates to: IIEAFNCPRTGS*HCSCLTFSDKA
Trigger: TGCTTTGTCACTGAAAGTAAGGCAGCTGCAGTGGCAGGACCCTGTTCTAGGACAGTTGAATGCCTCTATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513016.5
CDS TCA 72 bp AACAGGGTCCTGCCACTGCAGCTGCCTTACTTTCAGTaGCAAAGCAGTATGAAAATGTGCCTGTGGATATAC +
Preference number: 6 (lower is better)
Translates to: NRVLPLQLPYFQ*QSSMKMCLWIY
Trigger: GTATATCCACAGGCACATTTTCATACTGCTTTGTCACTGAAAGTAAGGCAGCTGCAGTGGCAGGACCCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513016.5
CDS GCA 72 bp GGCACAGTGGTAACGAGATGCTTCCCATTTATGTACTaGACAGATGGGGTGGTTGTCACATCAGTAGCATTT +
Preference number: 6 (lower is better)
Translates to: GTVVTRCFPFMY*TDGVVVTSVAF
Trigger: AAATGCTACTGATGTGACAACCACCCCATCTGTGCAGTACATAAATGGGAAGCATCTCGTTACCACTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS CCA 72 bp GGTAACGAGATGCTTCCCATTTATGTACTGCACAGATaGGGTGGTTGTCACATCAGTAGCATTTGCACACTC +
Preference number: 6 (lower is better)
Translates to: GNEMLPIYVLHR*GGCHISSICTL
Trigger: GAGTGTGCAAATGCTACTGATGTGACAACCACCCCATCTGTGCAGTACATAAATGGGAAGCATCTCGTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS CCA 72 bp ATCAAAATCAAGTTCACACTGGTCTCCGCTGTATCCTaGCACACAGGTGCATACGTAGGAAGTTTCAGTAGG +
Preference number: 6 (lower is better)
Translates to: IKIKFTLVSAVS*HTGAYVGSFSR
Trigger: CCTACTGAAACTTCCTACGTATGCACCTGTGTGCCAGGATACAGCGGAGACCAGTGTGAACTTGATTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000507162.1
ENST00000512590.6
ENST00000513016.5
CDS CAA 90 bp GAGAGCTCTACAACTTGTCTAGGAGTTGCTTCTACCCAGCTTTCTTaGGTAGACAACAGGTCATCTGGCCAAGGATTTCCTATTAGGGTA +
Preference number: 6 (lower is better)
Translates to: ESSTTCLGVASTQLS*VDNRSSGQGFPIRV
Trigger: TACCCTAATAGGAAATCCTTGGCCAGATGACCTGTTGTCTACCAAAGAAAGCTGGGTAGAAGCAACTCCTAGACAAGTTGTAGAGCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS TCA 72 bp AGTGGGTGGTCTTGTTGGCTGTGTAGCAGGAGGACTTaGAGTCGTGAAATACTCTCTATCAATATCGGTTTC +
Preference number: 6 (lower is better)
Translates to: SGWSCWLCSRRT*SREILSINIGF
Trigger: GAAACCGATATTGATAGAGAGTATTTCACGACTTCAAGTCCTCCTGCTACACAGCCAACAAGACCACCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS TCA 72 bp TCCAGAGCCTTCTGTAATTGGAATCGAAGAACTCCCTaGGAGCTCTACAACTTGTCTAGGAGTTGCTTCTAC +
Preference number: 6 (lower is better)
Translates to: SRAFCNWNRRTP*ELYNLSRSCFY
Trigger: GTAGAAGCAACTCCTAGACAAGTTGTAGAGCTCTCAGGGAGTTCTTCGATTCCAATTACAGAAGGCTCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS TCA 72 bp GCTGTTCTGATGCTGCTATCGTGGAATCCTGCCCTCTaGTTAAAGCTGCTTGAGTTTCAGGGTTTATTTCTG +
Preference number: 6 (lower is better)
Translates to: AVLMLLSWNPAL*LKLLEFQGLFL
Trigger: CAGAAATAAACCCTGAAACTCAAGCAGCTTTAATCAGAGGGCAGGATTCCACGATAGCAGCATCAGAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000507162.1
ENST00000513016.5
CDS TCA 72 bp TTACATTGCAATGGCATCCTCTACCTACTGTGGCACTaGGACATGAGCTTAACCACATCCTATGCACAAGAG +
Preference number: 6 (lower is better)
Translates to: LHCNGILYLLWH*DMSLTTSYAQE
Trigger: CTCTTGTGCATAGGATGTGGTTAAGCTCATGTCTCAGTGCCACAGTAGGTAGAGGATGCCATTGCAATGTAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513016.5
CDS GCA 72 bp ATCTTCTACTTCACCCAAAGCACTTCCTTCCATGGTTaGATAAACTTGGCCTTCAGTGCTTGTGATAGGTGG +
Preference number: 6 (lower is better)
Translates to: IFYFTQSTSFHG*INLAFSACDRW
Trigger: CCACCTATCACAAGCACTGAAGGCCAAGTTTATGCAACCATGGAAGGAAGTGCTTTGGGTGAAGTAGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CCA 72 bp AATGCTAATCCTTCCACCTCTGAAGTGTGTGCAAATTaGGGAACAGTAGATACTGGCTTAGAGAGGTCCACA +
Preference number: 6 (lower is better)
Translates to: NANPSTSEVCAN*GTVDTGLERST
Trigger: TGTGGACCTCTCTAAGCCAGTATCTACTGTTCCCCAATTTGCACACACTTCAGAGGTGGAAGGATTAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CCA 72 bp TTGCATACTCTACGTTTAATGAAAATGAAGAAACAGTaGTGGTTTCTGGGTCGGCAGCAGCTTCTCCAGAGC +
Preference number: 6 (lower is better)
Translates to: LHTLRLMKMKKQ*WFLGRQQLLQS
Trigger: GCTCTGGAGAAGCTGCTGCCGACCCAGAAACCACCACTGTTTCTTCATTTTCATTAAACGTAGAGTATGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS CCA 72 bp TACTCTGTCCATTACTGTACTCAAAACCAGTCCTGTTaGCTCAGTGGAGAATGTAGTTTCCACATGCGGAGA +
Preference number: 6 (lower is better)
Translates to: YSVHYCTQNQSC*LSGECSFHMRR
Trigger: TCTCCGCATGTGGAAACTACATTCTCCACTGAGCCAACAGGACTGGTTTTGAGTACAGTAATGGACAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS CCA 72 bp TTTAAGGTGGAATCCTCGAATTCCCTGAAACGGTCTTaGAAACTACCGTCTGTGGACCTCTCATATGACACT +
Preference number: 6 (lower is better)
Translates to: FKVESSNSLKRS*KLPSVDLSYDT
Trigger: AGTGTCATATGAGAGGTCCACAGACGGTAGTTTCCAAGACCGTTTCAGGGAATTCGAGGATTCCACCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS CAA 72 bp ACAACTTGTCTAGGAGTTGCTTCTACCCAGCTTTCTTaGGTAGACAACAGGTCATCTGGCCAAGGATTTCCT +
Preference number: 6 (lower is better)
Translates to: TTCLGVASTQLS*VDNRSSGQGFP
Trigger: AGGAAATCCTTGGCCAGATGACCTGTTGTCTACCAAAGAAAGCTGGGTAGAAGCAACTCCTAGACAAGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS CAA 72 bp CCACTGATAATCATGGCCCACACGATTAACAAACATTaGTTCTTCGTGAGACAGGATGCTTGTGAGATGGGC +
Preference number: 6 (lower is better)
Translates to: PLIIMAHTINKH*FFVRQDACEMG
Trigger: GCCCATCTCACAAGCATCCTGTCTCACGAAGAACAAATGTTTGTTAATCGTGTGGGCCATGATTATCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000505615.1
ENST00000512590.6
ENST00000513016.5
CDS CAA 90 bp ATGGCCTTTTCTGCTATCAGAAATACATCAGCAAAGCTCCTTGTCTaGGGCACTAGGAAAGAGGAAATTCTGAGGTCTCATCATAGAGGC +
Preference number: 6 (lower is better)
Translates to: MAFSAIRNTSAKLLV*GTRKEEILRSHHRG
Trigger: GCCTCTATGATGAGACCTCAGAATTTCCTCTTTCCTAGTGCCCAAGACAAGGAGCTTTGCTGATGTATTTCTGATAGCAGAAAAGGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513016.5
CDS TCA 72 bp GTGGGTAATTTGGTGGCTAAACTATCTGTGATAGCCTaGGGTTGGACTGTGGCTTTCTGTTCAAAACTGACA +
Preference number: 6 (lower is better)
Translates to: VGNLVAKLSVIA*GWTVAFCSKLT
Trigger: TGTCAGTTTTGAACAGAAAGCCACAGTCCAACCTCAGGCTATCACAGATAGTTTAGCCACCAAATTACCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS TCA 72 bp ACCTGTCAACAATTCATCTTCAGAGACTGTATATGCTaGTCCATCGCCCTCTTGTTCATCCAGTGGTGTTAC +
Preference number: 6 (lower is better)
Translates to: TCQQFIFRDCIC*SIALLFIQWCY
Trigger: GTAACACCACTGGATGAACAAGAGGGCGATGGATCAGCATATACAGTCTCTGAAGATGAATTGTTGACAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS TCA 72 bp CAGAGCCCTCAAATGTTTCCTCAGTTAAAGAAAGGTTaGCAGCTGCCTCATAGATCTCTTGAACTTGAGTGC +
Preference number: 6 (lower is better)
Translates to: QSPQMFPQLKKG*QLPHRSLELEC
Trigger: GCACTCAAGTTCAAGAGATCTATGAGGCAGCTGTCAACCTTTCTTTAACTGAGGAAACATTTGAGGGCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS TCA 72 bp TTGGTCTGCAATAGCTTGACCATCAGACAAAGTGCTTaGTTCAAACATGTCATCCAGGGCTTTTGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: LVCNSLTIRQSA*FKHVIQGFCFS
Trigger: GCTGAAGCAAAAGCCCTGGATGACATGTTTGAATCAAGCACTTTGTCTGATGGTCAAGCTATTGCAGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS GCA 72 bp GTTCAGGCCCTGGACTTAAAGATACTTTTGGCCCAATaGGTGGTGTTAGTGTTACCACTTCATCTGTTTTCA +
Preference number: 6 (lower is better)
Translates to: VQALDLKILLAQ*VVLVLPLHLFS
Trigger: TGAAAACAGATGAAGTGGTAACACTAACACCACGCATTGGGCCAAAAGTATCTTTAAGTCCAGGGCCTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS GCA 72 bp AGTTATGGTTTGTGGTCTACTAGTCTGGATTTCTTCTaGCCACCTGACAGTCTGATTTTGAGGATGTCCGAT +
Preference number: 6 (lower is better)
Translates to: SYGLWSTSLDFF*PPDSLILRMSD
Trigger: ATCGGACATCCTCAAAATCAGACTGTCAGGTGGGCAGAAGAAATCCAGACTAGTAGACCACAAACCATAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS CCA 72 bp CAGGGCTTTTGCTTCAGCTTTTATTCCTTCAATCTCTaGAATAACTGTGGCAGACTTACGAGGAATTGGCAG +
Preference number: 6 (lower is better)
Translates to: QGFCFSFYSFNL*NNCGRLTRNWQ
Trigger: CTGCCAATTCCTCGTAAGTCTGCCACAGTTATTCCAGAGATTGAAGGAATAAAAGCTGAAGCAAAAGCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS CAA 72 bp TTCACCCAAAGCACTTCCTTCCATGGTTGCATAAACTaGGCCTTCAGTGCTTGTGATAGGTGGAACTTTTTC +
Preference number: 6 (lower is better)
Translates to: FTQSTSFHGCIN*AFSACDRWNFF
Trigger: GAAAAAGTTCCACCTATCACAAGCACTGAAGGCCAAGTTTATGCAACCATGGAAGGAAGTGCTTTGGGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CAA 72 bp TCAGTATCTCTCTCTGTGACTGATTCTGCCCCTTTTTaGGCTGTTCCACTTTCAAATTCCTCATGGAATGGG +
Preference number: 6 (lower is better)
Translates to: SVSLSVTDSAPF*AVPLSNSSWNG
Trigger: CCCATTCCATGAGGAATTTGAAAGTGGAACAGCCAAAAAAGGGGCAGAATCAGTCACAGAGAGAGATACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS TCA 72 bp CATTTCCACAGAAGACTCTGTAACATGAATTGGCTCTaGGAGAGATGTAGAGAGTTTCATCCCAGAGAAGAC +
Preference number: 6 (lower is better)
Translates to: HFHRRLCNMNWL*ERCREFHPRED
Trigger: GTCTTCTCTGGGATGAAACTCTCTACATCTCTCTCAGAGCCAATTCATGTTACAGAGTCTTCTGTGGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS TCA 72 bp CTGGTTACTGACCCACTACCTTCAAAGATGTCTGTTTaGGATACGAGTGGTCCAACTTCTTTTGCCACATTT +
Preference number: 6 (lower is better)
Translates to: LVTDPLPSKMSV*DTSGPTSFATF
Trigger: AAATGTGGCAAAAGAAGTTGGACCACTCGTATCTCAAACAGACATCTTTGAAGGTAGTGGGTCAGTAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS GCA 72 bp CTGCACAGATGGGGTGGTTGTCACATCAGTAGCATTTaGACACTCTTCTTCTTCTTCTTCATTTTCTTCACT +
Preference number: 6 (lower is better)
Translates to: LHRWGGCHISSI*TLFFFFFIFFT
Trigger: AGTGAAGAAAATGAAGAAGAAGAAGAAGAGTGTGCAAATGCTACTGATGTGACAACCACCCCATCTGTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
ENST00000515397.1
CDS GCA 72 bp TTCAGGAAACAGAGATACAGGTTCAGTATGTTCATGTaGCTGATGACCAACTTCAGTATCTCTCTCTGTGAC +
Preference number: 6 (lower is better)
Translates to: FRKQRYRFSMFM*LMTNFSISLCD
Trigger: GTCACAGAGAGAGATACTGAAGTTGGTCATCAGGCACATGAACATACTGAACCTGTATCTCTGTTTCCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS CCA 72 bp TCTTGCCTAGACCATAATTTGGCTGGCTCTATAGTTTaGGGAAAGTTTGTTGAAACTGTGCCACTGACCTTT +
Preference number: 6 (lower is better)
Translates to: SCLDHNLAGSIV*GKFVETVPLTF
Trigger: AAAGGTCAGTGGCACAGTTTCAACAAACTTTCCCCAAACTATAGAGCCAGCCAAATTATGGTCTAGGCAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS CCA 72 bp AAACTGCTAATGTTGTATCAGTGTAATATGGGGGATTaGATCCTTCCATCACATCAGGCACCTCTGTTACAC +
Preference number: 6 (lower is better)
Translates to: KLLMLYQCNMGD*ILPSHQAPLLH
Trigger: GTGTAACAGAGGTGCCTGATGTGATGGAAGGATCCAATCCCCCATATTACACTGATACAACATTAGCAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS CCA 72 bp AAAGAGCCTTCCACACCTATAGACCTTTATCCTTCCTaGGATGTGACCCAGATTAGGCTGATTTTAGTTCTT +
Preference number: 6 (lower is better)
Translates to: KEPSTPIDLYPS*DVTQIRLILVL
Trigger: AAGAACTAAAATCAGCCTAATCTGGGTCACATCCCAGGAAGGATAAAGGTCTATAGGTGTGGAAGGCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513016.5
CDS CAA 72 bp ACTTACAAACTTGGTAGGCACCACTTTTGCAGAAGGTaGTTCAGAAACTGGATAAATGGTGGTTGCAGGAAC +
Preference number: 6 (lower is better)
Translates to: TYKLGRHHFCRR*FRNWINGGCRN
Trigger: GTTCCTGCAACCACCATTTATCCAGTTTCTGAACAACCTTCTGCAAAAGTGGTGCCTACCAAGTTTGTAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS CAA 90 bp ATCTTCTACTTCACCCAAAGCACTTCCTTCCATGGTTGCATAAACTaGGCCTTCAGTGCTTGTGATAGGTGGAACTTTTTCTTCAGTTGT +
Preference number: 6 (lower is better)
Translates to: IFYFTQSTSFHGCIN*AFSACDRWNFFFSC
Trigger: ACAACTGAAGAAAAAGTTCCACCTATCACAAGCACTGAAGGCCAAGTTTATGCAACCATGGAAGGAAGTGCTTTGGGTGAAGTAGAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CAA 90 bp CACCTGGTGGATAAGACACACTGTGATCAATTTTTCCAACTGGAGTaGTTTCTAAAACTGGGACCCTCTCAGAACCTGTCAACAATTCAT +
Preference number: 6 (lower is better)
Translates to: HLVDKTHCDQFFQLE*FLKLGPSQNLSTIH
Trigger: ATGAATTGTTGACAGGTTCTGAGAGGGTCCCAGTTTTAGAAACAACTCCAGTTGGAAAAATTGATCACAGTGTGTCTTATCCACCAGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CAA 90 bp CCACATGCGGAGACAAAGTGCCAGCTACTTCCTTTTCGGCTTGAATaGCATACTCTACGTTTAATGAAAATGAAGAAACAGTGGTGGTTT +
Preference number: 6 (lower is better)
Translates to: PHAETKCQLLPFRLE*HTLRLMKMKKQWWF
Trigger: AAACCACCACTGTTTCTTCATTTTCATTAAACGTAGAGTATGCAATTCAAGCCGAAAAGGAAGTAGCTGGCACTTTGTCTCCGCATGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS CAA 90 bp TCCACTTCTGCTGTTGGTAAAATGGTGGATCTTCTATCAATTTCATaGACAGTACCCACTTCTCCCAATCCTTCGTCGATAATGGAGGAA +
Preference number: 6 (lower is better)
Translates to: STSAVGKMVDLLSIS*TVPTSPNPSSIMEE
Trigger: TTCCTCCATTATCGACGAAGGATTGGGAGAAGTGGGTACTGTCAATGAAATTGATAGAAGATCCACCATTTTACCAACAGCAGAAGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS CAA 90 bp GATTGCTTCTCCAGAAACTTGACCATCGGTTTTGTTTTGGAAATCTaGGAGAATCTCAGTTCCTTCCACAGCAATAAGTTCTGTGGGAGA +
Preference number: 6 (lower is better)
Translates to: DCFSRNLTIGFVLEI*ENLSSFHSNKFCGR
Trigger: TCTCCCACAGAACTTATTGCTGTGGAAGGAACTGAGATTCTCCAAGATTTCCAAAACAAAACCGATGGTCAAGTTTCTGGAGAAGCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS TCA 72 bp AATGTTACTTCTGTAGCCCTTGCAAAGGCTATTTTCTaGGATTCTTGGTCAATGGCAATCTCTCCTGAAGAC +
Preference number: 6 (lower is better)
Translates to: NVTSVALAKAIF*DSWSMAISPED
Trigger: GTCTTCAGGAGAGATTGCCATTGACCAAGAATCTCAGAAAATAGCCTTTGCAAGGGCTACAGAAGTAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS TCA 72 bp CCCAGTCCAGAGAATAAGAGCTCAGTATCTGACTCTTaGATTGTTGGTCTCATGCCTTTCGGAAAATGTTTT +
Preference number: 6 (lower is better)
Translates to: PSPENKSSVSDS*IVGLMPFGKCF
Trigger: AAAACATTTTCCGAAAGGCATGAGACCAACAATTCAAGAGTCAGATACTGAGCTCTTATTCTCTGGACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS GCA 72 bp GTCTGTTTCACTTACAAACTTGGTAGGCACCACTTTTaGAGAAGGTTGTTCAGAAACTGGATAAATGGTGGT +
Preference number: 6 (lower is better)
Translates to: VCFTYKLGRHHF*RRLFRNWINGG
Trigger: ACCACCATTTATCCAGTTTCTGAACAACCTTCTGCAAAAGTGGTGCCTACCAAGTTTGTAAGTGAAACAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS GCA 72 bp GAAAACACACAATATTACTTGCTCCATACCCTAAACTaGCGATACCACAGCCGTAAAATGAAGGTGTCTAGT +
Preference number: 6 (lower is better)
Translates to: ENTQYYLLHTLN*RYHSRKMKVSS
Trigger: ACTAGACACCTTCATTTTACGGCTGTGGTATCGGCAGTTTAGGGTATGGAGCAAGTAATATTGTGTGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505615.1
CDS GCA 72 bp CATATGGTACCAACCACTAAGCTCAATGGCCTTTTCTaGTATCAGAAATACATCAGCAAAGCTCCTTGTCTT +
Preference number: 6 (lower is better)
Translates to: HMVPTTKLNGLF*YQKYISKAPCL
Trigger: AAGACAAGGAGCTTTGCTGATGTATTTCTGATAGCAGAAAAGGCCATTGAGCTTAGTGGTTGGTACCATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513016.5
CDS CCA 72 bp GGTGGGCTTTTTCCCACTTTGACTTTATGTAGCGCATaGGTTACTATTAAGGTTGAACACATCCATAAGATG +
Preference number: 6 (lower is better)
Translates to: GGLFPTLTLCSA*VTIKVEHIHKM
Trigger: CATCTTATGGATGTGTTCAACCTTAATAGTAACCCATGCGCTACATAAAGTCAAAGTGGGAAAAAGCCCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS CCA 72 bp TCTGAAGTCTTTGACACCGTAATGACTTCAGGAATTTaGTCAAAGATCAAGGTGCTCTCATCAGATCCAACT +
Preference number: 6 (lower is better)
Translates to: SEVFDTVMTSGI*SKIKVLSSDPT
Trigger: AGTTGGATCTGATGAGAGCACCTTGATCTTTGACCAAATTCCTGAAGTCATTACGGTGTCAAAGACTTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CCA 72 bp CCCACTACCTTCAAAGATGTCTGTTTGAGATACGAGTaGTCCAACTTCTTTTGCCACATTTTCCATTCTGTT +
Preference number: 6 (lower is better)
Translates to: PTTFKDVCLRYE*SNFFCHIFHSV
Trigger: AACAGAATGGAAAATGTGGCAAAAGAAGTTGGACCACTCGTATCTCAAACAGACATCTTTGAAGGTAGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS CAA 72 bp CGATGCTGTGATGGAAAAGGTGTAGTAGACAGATATTaGCCAAGAAACTCTTCCGTTATCCTACCACTAGTT +
Preference number: 6 (lower is better)
Translates to: RCCDGKGVVDRY*PRNSSVILPLV
Trigger: AACTAGTGGTAGGATAACGGAAGAGTTTCTTGGCAAATATCTGTCTACTACACCTTTTCCATCACAGCATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CAA 72 bp GATAAGACACACTGTGATCAATTTTTCCAACTGGAGTaGTTTCTAAAACTGGGACCCTCTCAGAACCTGTCA +
Preference number: 6 (lower is better)
Translates to: DKTHCDQFFQLE*FLKLGPSQNLS
Trigger: TGACAGGTTCTGAGAGGGTCCCAGTTTTAGAAACAACTCCAGTTGGAAAAATTGATCACAGTGTGTCTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CAA 72 bp GAAATCCACTCAGAAGTGTCTGTTTCACTTACAAACTaGGTAGGCACCACTTTTGCAGAAGGTTGTTCAGAA +
Preference number: 6 (lower is better)
Translates to: EIHSEVSVSLTN*VGTTFAEGCSE
Trigger: TTCTGAACAACCTTCTGCAAAAGTGGTGCCTACCAAGTTTGTAAGTGAAACAGACACTTCTGAGTGGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS CAA 72 bp GCTGTTGGTAAAATGGTGGATCTTCTATCAATTTCATaGACAGTACCCACTTCTCCCAATCCTTCGTCGATA +
Preference number: 6 (lower is better)
Translates to: AVGKMVDLLSIS*TVPTSPNPSSI
Trigger: TATCGACGAAGGATTGGGAGAAGTGGGTACTGTCAATGAAATTGATAGAAGATCCACCATTTTACCAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS CAA 72 bp TGTCTTACAGGGTTGACTTCTTGCCTAGACCATAATTaGGCTGGCTCTATAGTTTGGGGAAAGTTTGTTGAA +
Preference number: 6 (lower is better)
Translates to: CLTGLTSCLDHN*AGSIVWGKFVE
Trigger: TTCAACAAACTTTCCCCAAACTATAGAGCCAGCCAAATTATGGTCTAGGCAAGAAGTCAACCCTGTAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS CAA 90 bp AAAGGGATGATTGGTGTAGTTCTATCAGAAACCATTTGTGGTTCTTaGGATAAACTGGGTGATGCAGTTTCTGCGAGGATACTCAAATCG +
Preference number: 6 (lower is better)
Translates to: KGMIGVVLSETICGS*DKLGDAVSARILKS
Trigger: CGATTTGAGTATCCTCGCAGAAACTGCATCACCCAGTTTATCCAAAGAACCACAAATGGTTTCTGATAGAACTACACCAATCATCCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CAA 90 bp TCAATTTCTTGTCTTACAGGGTTGACTTCTTGCCTAGACCATAATTaGGCTGGCTCTATAGTTTGGGGAAAGTTTGTTGAAACTGTGCCA +
Preference number: 6 (lower is better)
Translates to: SISCLTGLTSCLDHN*AGSIVWGKFVETVP
Trigger: TGGCACAGTTTCAACAAACTTTCCCCAAACTATAGAGCCAGCCAAATTATGGTCTAGGCAAGAAGTCAACCCTGTAAGACAAGAAATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS CAA 90 bp ATGGTGTCTGAGAAGACAACTTCGCAAATGTTGAAACTGCTAATGTaGTATCAGTGTAATATGGGGGATTGGATCCTTCCATCACATCAG +
Preference number: 6 (lower is better)
Translates to: MVSEKTTSQMLKLLM*YQCNMGDWILPSHQ
Trigger: CTGATGTGATGGAAGGATCCAATCCCCCATATTACACTGATACAACATTAGCAGTTTCAACATTTGCGAAGTTGTCTTCTCAGACACCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS CAA 90 bp ATTTCTGTACGATGCTGTGATGGAAAAGGTGTAGTAGACAGATATTaGCCAAGAAACTCTTCCGTTATCCTACCACTAGTTTGTCTCTCT +
Preference number: 6 (lower is better)
Translates to: ISVRCCDGKGVVDRY*PRNSSVILPLVCLS
Trigger: AGAGAGACAAACTAGTGGTAGGATAACGGAAGAGTTTCTTGGCAAATATCTGTCTACTACACCTTTTCCATCACAGCATCGTACAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CAA 90 bp ACTCTAAAGGCTTGGATGTTGTATTATCTTCATCCCATGACCATTTaGATACAGTGGCTGCTTCAACACTTAAAGTACCATGGGCCAAAA +
Preference number: 6 (lower is better)
Translates to: TLKAWMLYYLHPMTI*IQWLLQHLKYHGPK
Trigger: TTTTGGCCCATGGTACTTTAAGTGTTGAAGCAGCCACTGTATCAAAATGGTCATGGGATGAAGATAATACAACATCCAAGCCTTTAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CAA 90 bp CTTCTGTTTCATATTTTTGTTCAGGCCCTGGACTTAAAGATACTTTaGGCCCAATGCGTGGTGTTAGTGTTACCACTTCATCTGTTTTCA +
Preference number: 6 (lower is better)
Translates to: LLFHIFVQALDLKIL*AQCVVLVLPLHLFS
Trigger: TGAAAACAGATGAAGTGGTAACACTAACACCACGCATTGGGCCAAAAGTATCTTTAAGTCCAGGGCCTGAACAAAAATATGAAACAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS TCA 72 bp TGCGGAGACAAAGTGCCAGCTACTTCCTTTTCGGCTTaGATTGCATACTCTACGTTTAATGAAAATGAAGAA +
Preference number: 6 (lower is better)
Translates to: CGDKVPATSFSA*IAYSTFNENEE
Trigger: TTCTTCATTTTCATTAAACGTAGAGTATGCAATTCAAGCCGAAAAGGAAGTAGCTGGCACTTTGTCTCCGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS TCA 72 bp ATGGTGGGAAACATCTTGATTGCTTCTCCAGAAACTTaGCCATCGGTTTTGTTTTGGAAATCTTGGAGAATC +
Preference number: 6 (lower is better)
Translates to: MVGNILIASPET*PSVLFWKSWRI
Trigger: GATTCTCCAAGATTTCCAAAACAAAACCGATGGTCAAGTTTCTGGAGAAGCAATCAAGATGTTTCCCACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS CCA 72 bp AGTTTTGGATTCCAGGATCATTCTTGCAGTTACCAATaGTGTTTCAGTTACAGGGAATTCCTTGGAAGGAAT +
Preference number: 6 (lower is better)
Translates to: SFGFQDHSCSYQ*CFSYREFLGRN
Trigger: ATTCCTTCCAAGGAATTCCCTGTAACTGAAACACCATTGGTAACTGCAAGAATGATCCTGGAATCCAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CCA 72 bp TTCATCTGTTTTCACTTTGTGCTCAGTTACAGCACCTaGTGGATAAGACACACTGTGATCAATTTTTCCAAC +
Preference number: 6 (lower is better)
Translates to: FICFHFVLSYST*WIRHTVINFSN
Trigger: GTTGGAAAAATTGATCACAGTGTGTCTTATCCACCAGGTGCTGTAACTGAGCACAAAGTGAAAACAGATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CAA 72 bp CCCTTTGTAGTCCTGACCAATCTTGATATTTCCATTTaGGGCCACAAGGACAGTAGTCTCTTTCAAATCTTT +
Preference number: 6 (lower is better)
Translates to: PFVVLTNLDISI*GHKDSSLFQIF
Trigger: AAAGATTTGAAAGAGACTACTGTCCTTGTGGCCCAAAATGGAAATATCAAGATTGGTCAGGACTACAAAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS CAA 72 bp ATTGGTGTAGTTCTATCAGAAACCATTTGTGGTTCTTaGGATAAACTGGGTGATGCAGTTTCTGCGAGGATA +
Preference number: 6 (lower is better)
Translates to: IGVVLSETICGS*DKLGDAVSARI
Trigger: TATCCTCGCAGAAACTGCATCACCCAGTTTATCCAAAGAACCACAAATGGTTTCTGATAGAACTACACCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CAA 72 bp GAGATGATGGTGTCTGAGAAGACAACTTCGCAAATGTaGAAACTGCTAATGTTGTATCAGTGTAATATGGGG +
Preference number: 6 (lower is better)
Translates to: EMMVSEKTTSQM*KLLMLYQCNMG
Trigger: CCCCATATTACACTGATACAACATTAGCAGTTTCAACATTTGCGAAGTTGTCTTCTCAGACACCATCATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS CAA 72 bp TCCAGAAACTTGACCATCGGTTTTGTTTTGGAAATCTaGGAGAATCTCAGTTCCTTCCACAGCAATAAGTTC +
Preference number: 6 (lower is better)
Translates to: SRNLTIGFVLEI*ENLSSFHSNKF
Trigger: GAACTTATTGCTGTGGAAGGAACTGAGATTCTCCAAGATTTCCAAAACAAAACCGATGGTCAAGTTTCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS CAA 72 bp GAAAAACAAGAGAGCTTTATTTATAGCCCTTTTACATaGCAATGGCATCCTCTACCTACTGTGGCACTGAGA +
Preference number: 6 (lower is better)
Translates to: EKQESFIYSPFT*QWHPLPTVALR
Trigger: TCTCAGTGCCACAGTAGGTAGAGGATGCCATTGCAATGTAAAAGGGCTATAAATAAAGCTCTCTTGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513016.5
CDS CAA 90 bp AGACACTCTCCCTTTGTAGTCCTGACCAATCTTGATATTTCCATTTaGGGCCACAAGGACAGTAGTCTCTTTCAAATCTTTTCCATTTTT +
Preference number: 6 (lower is better)
Translates to: RHSPFVVLTNLDISI*GHKDSSLFQIFSIF
Trigger: AAAAATGGAAAAGATTTGAAAGAGACTACTGTCCTTGTGGCCCAAAATGGAAATATCAAGATTGGTCAGGACTACAAAGGGAGAGTGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000343200.9
ENST00000502527.2
ENST00000512590.6
ENST00000513960.5
ENST00000513984.5
CDS CAA 90 bp TCTACTGAACTGAAGGCAGTGGTAATATCACTTGGAACTGTGACTTaGATTGTTGAAAATTCTATGAGTTCTGTGGCTTTGGGCTTTTCA +
Preference number: 6 (lower is better)
Translates to: STELKAVVISLGTVT*IVENSMSSVALGFS
Trigger: TGAAAAGCCCAAAGCCACAGAACTCATAGAATTTTCAACAATCAAAGTCACAGTTCCAAGTGATATTACCACTGCCTTCAGTTCAGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CAA 90 bp AAACATCTTGATTGCTTCTCCAGAAACTTGACCATCGGTTTTGTTTaGGAAATCTTGGAGAATCTCAGTTCCTTCCACAGCAATAAGTTC +
Preference number: 6 (lower is better)
Translates to: KHLDCFSRNLTIGFV*EILENLSSFHSNKF
Trigger: GAACTTATTGCTGTGGAAGGAACTGAGATTCTCCAAGATTTCCAAAACAAAACCGATGGTCAAGTTTCTGGAGAAGCAATCAAGATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS TCA 72 bp AAGCTGGGTAATGTGGGTACTAAAAGGACTCAAAGATaGTGTAAATCCTGTTGTACTACTACCTTCTGTTTC +
Preference number: 6 (lower is better)
Translates to: KLGNVGTKRTQR*CKSCCTTTFCF
Trigger: GAAACAGAAGGTAGTAGTACAACAGGATTTACATCATCTTTGAGTCCTTTTAGTACCCACATTACCCAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS GCA 72 bp TCAGGGAATTCAGGTAAAATTTCAGCCATTAGATCATaGACTGGATCTGTTTCTTCACTACAAGGTTCATCT +
Preference number: 6 (lower is better)
Translates to: SGNSGKISAIRS*TGSVSSLQGSS
Trigger: AGATGAACCTTGTAGTGAAGAAACAGATCCAGTGCATGATCTAATGGCTGAAATTTTACCTGAATTCCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
ENST00000515397.1
CDS GCA 72 bp TCAAGAGACTCAGTTGTTTCTGTAGATTCATTAGGTTaGACAGCAGTAGACAATTCCGTTTTGGCTATTACA +
Preference number: 6 (lower is better)
Translates to: SRDSVVSVDSLG*TAVDNSVLAIT
Trigger: TGTAATAGCCAAAACGGAATTGTCTACTGCTGTGCAACCTAATGAATCTACAGAAACAACTGAGTCTCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS CCA 72 bp TTGTATTATCTTCATCCCATGACCATTTTGATACAGTaGCTGCTTCAACACTTAAAGTACCATGGGCCAAAA +
Preference number: 6 (lower is better)
Translates to: LYYLHPMTILIQ*LLQHLKYHGPK
Trigger: TTTTGGCCCATGGTACTTTAAGTGTTGAAGCAGCCACTGTATCAAAATGGTCATGGGATGAAGATAATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CAA 72 bp GCTTGGATGTTGTATTATCTTCATCCCATGACCATTTaGATACAGTGGCTGCTTCAACACTTAAAGTACCAT +
Preference number: 6 (lower is better)
Translates to: AWMLYYLHPMTI*IQWLLQHLKYH
Trigger: ATGGTACTTTAAGTGTTGAAGCAGCCACTGTATCAAAATGGTCATGGGATGAAGATAATACAACATCCAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CAA 72 bp TTTGAAGAGGCTGAAGGTTCTGTAGACTCTAAAGGCTaGGATGTTGTATTATCTTCATCCCATGACCATTTT +
Preference number: 6 (lower is better)
Translates to: FEEAEGSVDSKG*DVVLSSSHDHF
Trigger: AAAATGGTCATGGGATGAAGATAATACAACATCCAAGCCTTTAGAGTCTACAGAACCTTCAGCCTCTTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CAA 72 bp CTGAAGGCAGTGGTAATATCACTTGGAACTGTGACTTaGATTGTTGAAAATTCTATGAGTTCTGTGGCTTTG +
Preference number: 6 (lower is better)
Translates to: LKAVVISLGTVT*IVENSMSSVAL
Trigger: CAAAGCCACAGAACTCATAGAATTTTCAACAATCAAAGTCACAGTTCCAAGTGATATTACCACTGCCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CAA 72 bp TTCAAGAGACTCAGTTGTTTCTGTAGATTCATTAGGTaGCACAGCAGTAGACAATTCCGTTTTGGCTATTAC +
Preference number: 6 (lower is better)
Translates to: FKRLSCFCRFIR*HSSRQFRFGYY
Trigger: GTAATAGCCAAAACGGAATTGTCTACTGCTGTGCAACCTAATGAATCTACAGAAACAACTGAGTCTCTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS CAA 72 bp GAGACAAAGTGCCAGCTACTTCCTTTTCGGCTTGAATaGCATACTCTACGTTTAATGAAAATGAAGAAACAG +
Preference number: 6 (lower is better)
Translates to: ETKCQLLPFRLE*HTLRLMKMKKQ
Trigger: CTGTTTCTTCATTTTCATTAAACGTAGAGTATGCAATTCAAGCCGAAAAGGAAGTAGCTGGCACTTTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
ENST00000513960.5
CDS CAA 72 bp AATGGTGGGAAACATCTTGATTGCTTCTCCAGAAACTaGACCATCGGTTTTGTTTTGGAAATCTTGGAGAAT +
Preference number: 6 (lower is better)
Translates to: NGGKHLDCFSRN*TIGFVLEILEN
Trigger: ATTCTCCAAGATTTCCAAAACAAAACCGATGGTCAAGTTTCTGGAGAAGCAATCAAGATGTTTCCCACCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS CAA 90 bp GTAGATGAGGTTGTTGTTTCGTTAATTTCTGCTGTTGAAGAATTCTaGTTAGAGTCTTGTTCAGTTATGGTTTGTGGTCTACTAGTCTGG +
Preference number: 6 (lower is better)
Translates to: VDEVVVSLISAVEEF*LESCSVMVCGLLVW
Trigger: CCAGACTAGTAGACCACAAACCATAACTGAACAAGACTCTAACAAGAATTCTTCAACAGCAGAAATTAACGAAACAACAACCTCATCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS TCA 72 bp GCTATGTCTTCATCAGTAACCTCCTCTAACTGCTTTTaGGTACTATCTGGAATAAGAGTAAATTCATCTGCT +
Preference number: 6 (lower is better)
Translates to: AMSSSVTSSNCF*VLSGIRVNSSA
Trigger: AGCAGATGAATTTACTCTTATTCCAGATAGTACTCAAAAGCAGTTAGAGGAGGTTACTGATGAAGACATAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS TCA 72 bp AATGCTCAGAAACTGTTTTTCTTCGAAAGTGTGCACTaGAGTCTCTTCTGCTACATTAACATGCTTTTTCCA +
Preference number: 6 (lower is better)
Translates to: NAQKLFFFESVH*SLFCYINMLFP
Trigger: TGGAAAAAGCATGTTAATGTAGCAGAAGAGACTTCAGTGCACACTTTCGAAGAAAAACAGTTTCTGAGCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507162.1
CDS GCA 72 bp AGAGCTCAGTATCTGACTCTTGAATTGTTGGTCTCATaGCTTTCGGAAAATGTTTTGTACTTTCTTCCTTTT +
Preference number: 6 (lower is better)
Translates to: RAQYLTLELLVS*LSENVLYFLPF
Trigger: AAAAGGAAGAAAGTACAAAACATTTTCCGAAAGGCATGAGACCAACAATTCAAGAGTCAGATACTGAGCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS GCA 72 bp AGTATGTATCATCAGAATATTTCCCAGATTGTAAATTaGCATATGGTACCAACCACTAAGCTCAATGGCCTT +
Preference number: 6 (lower is better)
Translates to: SMYHQNISQIVN*HMVPTTKLNGL
Trigger: AAGGCCATTGAGCTTAGTGGTTGGTACCATATGGCAATTTACAATCTGGGAAATATTCTGATGATACATACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513016.5
CDS CCA 72 bp CTCCAGTGTCACTTAAAATTTCTATTAATGTTGTGCTaGTTACTGACCCACTACCTTCAAAGATGTCTGTTT +
Preference number: 6 (lower is better)
Translates to: LQCHLKFLLMLC*LLTHYLQRCLF
Trigger: AAACAGACATCTTTGAAGGTAGTGGGTCAGTAACCAGCACAACATTAATAGAAATTTTAAGTGACACTGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS TCA 72 bp AATGTTGGTATTATTTCACTTTGGTCTGCAATAGCTTaGCCATCAGACAAAGTGCTTGATTCAAACATGTCA +
Preference number: 6 (lower is better)
Translates to: NVGIISLWSAIA*PSDKVLDSNMS
Trigger: TGACATGTTTGAATCAAGCACTTTGTCTGATGGTCAAGCTATTGCAGACCAAAGTGAAATAATACCAACATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5
CDS GCA 72 bp GGAGAAAACAACTGTTTTCTCCTGAATTGTTCCTGTTaGAAGAAGCTATTTCCTTCTATGTATAGAAGAAAC +
Preference number: 6 (lower is better)
Translates to: GENNCFLLNCSC*KKLFPSMYRRN
Trigger: GTTTCTTCTATACATAGAAGGAAATAGCTTCTTGCAACAGGAACAATTCAGGAGAAAACAGTTGTTTTCTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513016.5
CDS GCA 72 bp GAAGCAAGGAATCACATATACAATGTAATCTTGAAGTaGAGGAATTCATCTTTGTGTGAACTGCAAAAAGAG +
Preference number: 6 (lower is better)
Translates to: EARNHIYNVILK*RNSSLCELQKE
Trigger: CTCTTTTTGCAGTTCACACAAAGATGAATTCCTGCACTTCAAGATTACATTGTATATGTGATTCCTTGCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513016.5
CDS CCA 72 bp TTTGATACAGTGGCTGCTTCAACACTTAAAGTACCATaGGCCAAAAGCACTGTTGTAATATTTTCATCATAT +
Preference number: 6 (lower is better)
Translates to: FDTVAASTLKVP*AKSTVVIFSSY
Trigger: ATATGATGAAAATATTACAACAGTGCTTTTGGCCCATGGTACTTTAAGTGTTGAAGCAGCCACTGTATCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000342785.8
ENST00000512590.6
CDS CAA 72 bp GTTGTTGTTTCGTTAATTTCTGCTGTTGAAGAATTCTaGTTAGAGTCTTGTTCAGTTATGGTTTGTGGTCTA +
Preference number: 6 (lower is better)
Translates to: VVVSLISAVEEF*LESCSVMVCGL
Trigger: TAGACCACAAACCATAACTGAACAAGACTCTAACAAGAATTCTTCAACAGCAGAAATTAACGAAACAACAAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265077.8
ENST00000343200.9
ENST00000513016.5