RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VCAM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000162692

Ensembl transcript IDs: ENST00000294728.7, ENST00000347652.6, ENST00000370115.1, ENST00000370119.8, ENST00000603679.1, ENST00000650339.1

Found 358 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTAGGGAGCTGCCTGCTCCACAGGATTTTCGGAGCAGGAAAGCCCTaGCTCAAGCATGTCATATTCACAGAACTGCCTTCCTCCAGGATG +
Preference number: 1 (lower is better)
Translates to: LGSCLLHRIFGAGKP*LKHVIFTELPSSRM
Trigger: CATCCTGGAGGAAGGCAGTTCTGTGAATATGACATGCTTGAGCCAGGGCTTTCCTGCTCCGAAAATCCTGTGGAGCAGGCAGCTCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR TCA 90 bp TCACAGCCCATGACACTACATGTCAACATGACTGAGTCTCCAATCTaGGCAGCAATCCGGGGTCCAGGGGAGATCTCAACAGTAAATGGT +
Preference number: 1 (lower is better)
Translates to: SQPMTLHVNMTESPI*AAIRGPGEISTVNG
Trigger: ACCATTTACTGTTGAGATCTCCCCTGGACCCCGGATTGCTGCTCAGATTGGAGACTCAGTCATGTTGACATGTAGTGTCATGGGCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR CCA 90 bp CTAATTTCTTACTCCAGAAAATCTCTGGAGCTGGTAGACCCTCGCTaGAACAGGTCATGGTCACAGAGCCACCTTCTTGCAGCTTTGTGG +
Preference number: 1 (lower is better)
Translates to: LISYSRKSLELVDPR*NRSWSQSHLLAALW
Trigger: CCACAAAGCTGCAAGAAGGTGGCTCTGTGACCATGACCTGTTCCAGCGAGGGTCTACCAGCTCCAGAGATTTTCTGGAGTAAGAAATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR TCA 90 bp GGCCACATTGGGAAAGTTGCACAGGAGTCTGATGAACAAACTTCGTaGAACATCTCCGTACCATGCCAGTACTATACAGAGAAACCCAGT +
Preference number: 1 (lower is better)
Translates to: GHIGKVAQESDEQTS*NISVPCQYYTEKPS
Trigger: ACTGGGTTTCTCTGTATAGTACTGGCATGGTACGGAGATGTTTCACGAAGTTTGTTCATCAGACTCCTGTGCAACTTTCCCAATGTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
3UTR GCA 90 bp AGTAAAGGTTACTTCCAAACTCTTGGTTTCCAGGGACTTCCTGTCTaGATCCTCCAGAAATTCCTGACTCTTCATGAGATGATCTCCTTT +
Preference number: 1 (lower is better)
Translates to: SKGYFQTLGFQGLPV*ILQKFLTLHEMISF
Trigger: AAAGGAGATCATCTCATGAAGAGTCAGGAATTTCTGGAGGATGCAGACAGGAAGTCCCTGGAAACCAAGAGTTTGGAAGTAACCTTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR TCA 90 bp GATGAGCAGTATCAAGGATTTGCACAGATAAATAGTGTCTCCAGTTaGACATATCAAGCATTAGCTACACTTTTGACTTCTGTGCTTCTA +
Preference number: 1 (lower is better)
Translates to: DEQYQGFAQINSVSS*TYQALATLLTSVLL
Trigger: TAGAAGCACAGAAGTCAAAAGTGTAGCTAATGCTTGATATGTTCAACTGGAGACACTATTTATCTGTGCAAATCCTTGATACTGCTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR TCA 90 bp GCATTCTCAGAAAGAGGCTGTAGCTCCCCGTTAGGGAGCTGCCTGCTCCACAGGTGGATCTCTAGGGAATaGGTAGAGCTCCACCTGGAT +
Preference number: 2 (lower is better)
Translates to: AFSERGCSSPLGSCLLHRWISRE*VELHLD
Trigger: ATCCAGGTGGAGCTCTACTCATTCCCTAGAGATCCA...CCTGTGGAGCAGGCAGCTCCCTAACGGGGAGCTACAGCCTCTTTCTGAGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR CCA 90 bp GCATTCTCAGAAAGAGGCTGTAGCTCCCCGTTAGGGAGCTGCCTGCTCCACAGGGGAGCAGGAAAGCCCTaGCTCAAGCATGTCATATTC +
Preference number: 2 (lower is better)
Translates to: AFSERGCSSPLGSCLLHRGAGKP*LKHVIF
Trigger: GAATATGACATGCTTGAGCCAGGGCTTTCCTGCTCC...CCTGTGGAGCAGGCAGCTCCCTAACGGGGAGCTACAGCCTCTTTCTGAGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR CAA 90 bp AGTAATTCAATCTCCAGCCGGTCAAGGGGGTACACGCTAGGAACCTaGCAGCTTACAGTGACAGAGCTCCCATTCACGAGGCCACCACTC +
Preference number: 2 (lower is better)
Translates to: SNSISSRSRGYTLGT*QLTVTELPFTRPPL
Trigger: GAGTGGTGGCCTCGTGAATGGGAGCTCTGTCACTGTAAGCTGCAAGGTTCCTAGCGTGTACCCCCTTGACCGGCTGGAGATTGAATTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR GCA 90 bp GCATTCTCAGAAAGAGGCTGTAGCTCCCCGTTAGGGAGCTGCCTGCTCCACAGGACAGAGCCACCTTCTTaGAGCTTTGTGGATGGATTC +
Preference number: 2 (lower is better)
Translates to: AFSERGCSSPLGSCLLHRTEPPS*SFVDGF
Trigger: GAATCCATCCACAAAGCTGCAAGAAGGTGGCTCTGT...CCTGTGGAGCAGGCAGCTCCCTAACGGGGAGCTACAGCCTCTTTCTGAGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR CCA 90 bp GGGGTACACGCTAGGAACCTTGCAGCTTACAGTGACAGAGCTCCCATTCACGAGAGAGGGCTGTCTATCTaGGTTCTCCAGGAGAAAGAT +
Preference number: 2 (lower is better)
Translates to: GVHARNLAAYSDRAPIHERGLSI*VLQEKD
Trigger: ATCTTTCTCCTGGAGAACCCAGATAGACAGCCCTCT...CTCGTGAATGGGAGCTCTGTCACTGTAAGCTGCAAGGTTCCTAGCGTGTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR GCA 90 bp GCATTCTCAGAAAGAGGCTGTAGCTCCCCGTTAGGGAGCTGCCTGCTCCACAGGAACATCTCCGTACCATaGCAGTACTATACAGAGAAA +
Preference number: 2 (lower is better)
Translates to: AFSERGCSSPLGSCLLHRNISVP*QYYTEK
Trigger: TTTCTCTGTATAGTACTGGCATGGTACGGAGATGTT...CCTGTGGAGCAGGCAGCTCCCTAACGGGGAGCTACAGCCTCTTTCTGAGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR CCA 90 bp CAGGATTTTCGGAGCAGGAAAGCCCTGGCTCAAGCATGTCATATTCACAGAACTCTGGTAGACCCTCGCTaGAACAGGTCATGGTCACAG +
Preference number: 2 (lower is better)
Translates to: QDFRSRKALAQACHIHRTLVDPR*NRSWSQ
Trigger: CTGTGACCATGACCTGTTCCAGCGAGGGTCTACCAG...AGTTCTGTGAATATGACATGCTTGAGCCAGGGCTTTCCTGCTCCGAAAATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR TCA 90 bp CACATTCATATACTCCCGCATCCTTCAACTGGGCCTTTCGGATGGTATAGGCGCACATGTCAACATGACTaGGTCTCCAATCTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: HIHILPHPSTGPFGWYRRTCQHD*VSNLSS
Trigger: GCTGCTCAGATTGGAGACTCAGTCATGTTGACATGT...GCGCCTATACCATCCGAAAGGCCCAGTTGAAGGATGCGGGAGTATATGAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR GCA 90 bp TGTAGCTCCCCGTTAGGGAGCTGCCTGCTCCACAGGATTTTCGGAGCAGGAAAGGCATTTCCAGAAAGGTaGTGTAGATTCCCATTATCT +
Preference number: 2 (lower is better)
Translates to: CSSPLGSCLLHRIFGAGKAFPER*CRFPLS
Trigger: AGATAATGGGAATCTACAGCACCTTTCTGGAAATGC...CTTTCCTGCTCCGAAAATCCTGTGGAGCAGGCAGCTCCCTAACGGGGAGCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR CCA 90 bp ACAGTGACAGAGCTCCCATTCACGAGGCCACCACTCATCTCGATTTCTGGATCTATTTTTAGGCCACATTaGGAAAGTTGCACAGGAGTC +
Preference number: 2 (lower is better)
Translates to: TVTELPFTRPPLISISGSIFRPH*ESCTGV
Trigger: GACTCCTGTGCAACTTTCCCAATGTGGCCTAAAAAT...AGATCCAGAAATCGAGATGAGTGGTGGCCTCGTGAATGGGAGCTCTGTCACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR CCA 90 bp CAGGATTTTCGGAGCAGGAAAGCCCTGGCTCAAGCATGTCATATTCACAGAACTCAGCCTGCCTTACTGTaGGCACAGAATCCATTTCAT +
Preference number: 2 (lower is better)
Translates to: QDFRSRKALAQACHIHRTQPALL*AQNPFH
Trigger: ATGAAATGGATTCTGTGCCCACAGTAAGGCAGGCTG...AGTTCTGTGAATATGACATGCTTGAGCCAGGGCTTTCCTGCTCCGAAAATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR TCA 90 bp AGGATTTTCGGAGCAGGAAAGCCCTGGCTCAAGCATGTCATATTCACAGAACTGCACTACATGTCAACATaGCTGAGTCTCCAATCTGAG +
Preference number: 2 (lower is better)
Translates to: RIFGAGKPWLKHVIFTELHYMST*LSLQSE
Trigger: CTCAGATTGGAGACTCAGTCATGTTGACATGTAGTG...CAGTTCTGTGAATATGACATGCTTGAGCCAGGGCTTTCCTGCTCCGAAAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR TCA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGGGATGGAGGAAGGGCTaGCCAAGACGGTTGTATCTC +
Preference number: 2 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQGWRKG*PRRLYL
Trigger: GAGATACAACCGTCTTGGTCAGCCCTTCCTCCATCC...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR TCA 90 bp GAGCCAACTTTGTTTTTAGATTCACATTCATATACTCCCGCATCCTTCAACTGGCCTTGCAGCTTACAGTaGCAGAGCTCCCATTCACGA +
Preference number: 2 (lower is better)
Translates to: EPTLFLDSHSYTPASFNWPCSLQ*QSSHSR
Trigger: TCGTGAATGGGAGCTCTGTCACTGTAAGCTGCAAGG...CCAGTTGAAGGATGCGGGAGTATATGAATGTGAATCTAAAAACAAAGTTGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR GCA 90 bp ACATTGGGAAAGTTGCACAGGAGTCTGATGAACAAACTTCGTGAAACATCTCCGTCATATTCACAGAACTaGCTTCCTCCAGGATGGAGG +
Preference number: 2 (lower is better)
Translates to: TLGKLHRSLMNKLRETSPSYSQN*LPPGWR
Trigger: CCTCCATCCTGGAGGAAGGCAGTTCTGTGAATATGA...CGGAGATGTTTCACGAAGTTTGTTCATCAGACTCCTGTGCAACTTTCCCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR TCA 90 bp CCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGCCAGTTCTCTCATCTTaGTGGCAGTTACTGTTCTTC +
Preference number: 2 (lower is better)
Translates to: PCQYYTEKPSQPLYHRLRPVLSS*WQLLFF
Trigger: GAAGAACAGTAACTGCCATCAAGATGAGAGAACTGG...CCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
3UTR CAA 90 bp GATGGCAGTTACTGTTCTTCAGGCAGCAAGTTTTACTTTGACTTCTaGCTCACAGCAAGGGACATAGATGGGCATTTCTTTCCAAGTTCA +
Preference number: 2 (lower is better)
Translates to: DGSYCSSGSKFYFDF*LTARDIDGHFFPSS
Trigger: TGAACTTGGAAAGAAATGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCCTGAAGAACAGTAACTGCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
3UTR CAA 90 bp TGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTaGAGGTATTTAGTACCTGAAAGTCAACCCAGTGCTCCCTTTGCT +
Preference number: 2 (lower is better)
Translates to: CQYYTEKPSQPLYHR*RYLVPESQPSAPFA
Trigger: AGCAAAGGGAGCACTGGGTTGACTTTCAGGTACTAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
3UTR-3UTR TCA 90 bp CAGGATTTTCGGAGCAGGAAAGCCCTGGCTCAAGCATGTCATATTCACAGAACTAACTGTATTCTTGGGTaGTATGTAGACTTGCAATTC +
Preference number: 2 (lower is better)
Translates to: QDFRSRKALAQACHIHRTNCILG*YVDLQF
Trigger: GAATTGCAAGTCTACATATCACCCAAGAATACAGTT...AGTTCTGTGAATATGACATGCTTGAGCCAGGGCTTTCCTGCTCCGAAAATCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR GCA 90 bp CCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGACATTCAGGGAAGTCTaGCTCTCAGCTCATTGTTTT +
Preference number: 2 (lower is better)
Translates to: PCQYYTEKPSQPLYHRLRTFREV*LSAHCF
Trigger: AAAACAATGAGCTGAGAGGCAGACTTCCCTGAATGT...CCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
3UTR-3UTR TCA 90 bp GAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAGTACCTGAAAGTGAGGTATTTAGTACCTaGAAGTCAACCCAGTGCTCC +
Preference number: 2 (lower is better)
Translates to: EKPSQPLYHRLRYLVPESEVFST*KSTQCS
Trigger: GGAGCACTGGGTTGACTTTCAGGTACTAAATACCTC...ACTTTCAGGTACTAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
3UTR-3UTR GCA 90 bp ACATTGGGAAAGTTGCACAGGAGTCTGATGAACAAACTTCGTGAAACATCTCCGAACATCTCCGTACCATaGCAGTACTATACAGAGAAA +
Preference number: 2 (lower is better)
Translates to: TLGKLHRSLMNKLRETSPNISVP*QYYTEK
Trigger: TTTCTCTGTATAGTACTGGCATGGTACGGAGATGTT...CGGAGATGTTTCACGAAGTTTGTTCATCAGACTCCTGTGCAACTTTCCCAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
3UTR-3UTR GCA 90 bp GACATAAAGTGTTTGCGTACTCTGCCTTTGTTTGGGTTCGAATTCCATGTCATCAATTCTTTTACAGCCTaGCTTACTGTGGGCACAGAA +
Preference number: 2 (lower is better)
Translates to: DIKCLRTLPLFGFEFHVINSFTA*LTVGTE
Trigger: TTCTGTGCCCACAGTAAGGCAGGCTGTAAAAGAATT...GATGACATGGAATTCGAACCCAAACAAAGGCAGAGTACGCAAACACTTTATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR GCA 90 bp TTCCAATGGCAGGTATTATTAAGGAGGATGCAAAATAGAGCACGAGAAGCTCAGAGTGTTTGCGTACTCTaGCTTTGTTTGGGTTCGAAT +
Preference number: 2 (lower is better)
Translates to: FQWQVLLRRMQNRAREAQSVCVL*LCLGSN
Trigger: ATTCGAACCCAAACAAAGGCAGAGTACGCAAACACT...CTGAGCTTCTCGTGCTCTATTTTGCATCCTCCTTAATAATACCTGCCATTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR CCA 90 bp TCTCCGTACCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAATTTTTAGGCCACATTaGGAAAGTTGCACAGGAGTC +
Preference number: 2 (lower is better)
Translates to: SPYHASTIQRNPVNHYTIIFRPH*ESCTGV
Trigger: GACTCCTGTGCAACTTTCCCAATGTGGCCTAAAAAT...TATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGGTACGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
3UTR-3UTR GCA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGACATTCAGGGAAGTCTaGCTCTCAGCTCATTGTTTT +
Preference number: 2 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQTFREV*LSAHCF
Trigger: AAAACAATGAGCTGAGAGGCAGACTTCCCTGAATGT...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
3UTR-3UTR GCA 90 bp TTGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACACATTCAGGGAAGTCTaGCTCTCAGCTCATTGTTTT +
Preference number: 2 (lower is better)
Translates to: LYIQIKELLQFSHLDGSYTFREV*LSAHCF
Trigger: AAAACAATGAGCTGAGAGGCAGACTTCCCTGAATGT...GTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
3UTR-3UTR GCA 90 bp ATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTACATTCAGGGAAGTCTaGCTCTCAGCTCATTGTTTT +
Preference number: 2 (lower is better)
Translates to: IYRSRNSSSSLILMAVTVTFREV*LSAHCF
Trigger: AAAACAATGAGCTGAGAGGCAGACTTCCCTGAATGT...AACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
3UTR-3UTR CCA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGAGCAAGGGACATAGATaGGCATTTCTTTCCAAGTTC +
Preference number: 2 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQSKGHR*AFLSKF
Trigger: GAACTTGGAAAGAAATGCCCATCTATGTCCCTTGCT...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
3UTR-3UTR CCA 90 bp ATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTAGCAAGGGACATAGATaGGCATTTCTTTCCAAGTTC +
Preference number: 2 (lower is better)
Translates to: IYRSRNSSSSLILMAVTVSKGHR*AFLSKF
Trigger: GAACTTGGAAAGAAATGCCCATCTATGTCCCTTGCT...AACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
3UTR-3UTR CCA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATTTTTAGGCCACATTaGGAAAGTTGCACAGGAGTC +
Preference number: 2 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQIFRPH*ESCTGV
Trigger: GACTCCTGTGCAACTTTCCCAATGTGGCCTAAAAAT...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
3UTR-3UTR CCA 90 bp TTAGTACCTGAAAGTCAACCCAGTGCTCCCTTTGCTTATTATTTGTCTATAAAATCTCCAGGAGAAAGATaGGGATTCACAGCCCATGAC +
Preference number: 2 (lower is better)
Translates to: LVPESQPSAPFAYYLSIKSPGER*GFTAHD
Trigger: GTCATGGGCTGTGAATCCCCATCTTTCTCCTGGAGA...TTTTATAGACAAATAATAAGCAAAGGGAGCACTGGGTTGACTTTCAGGTACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR TCA 90 bp CAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTACCAGTTCTCTCATCTTaGTGGCAGTTACTGTTCTTC +
Preference number: 2 (lower is better)
Translates to: QYYTEKPSQPLYHRLRYLPVLSS*WQLLFF
Trigger: GAAGAACAGTAACTGCCATCAAGATGAGAGAACTGG...TAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
3UTR-3UTR TCA 90 bp TCTCCGTACCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAATATGTAACTTAGCCTaGCAAACAAGAGCTTTTCCA +
Preference number: 2 (lower is better)
Translates to: SPYHASTIQRNPVNHYTIICNLA*QTRAFP
Trigger: TGGAAAAGCTCTTGTTTGTCAGGCTAAGTTACATAT...TATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGGTACGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR GCA 90 bp CCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGACCCAGTGCTCCCTTTaGTTATTATTTGTCTATAAA +
Preference number: 2 (lower is better)
Translates to: PCQYYTEKPSQPLYHRLRTQCSL*LLFVYK
Trigger: TTTATAGACAAATAATAAGCAAAGGGAGCACTGGGT...CCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
3UTR CAA 90 bp TGTTATTGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTaGATGGCAGTTACTGTTCTTCAGGCAGCAAGTTTTACTTTGACT +
Preference number: 2 (lower is better)
Translates to: CYCIYRSRNSSSSLI*MAVTVLQAASFTLT
Trigger: AGTCAAAGTAAAACTTGCTGCCTGAAGAACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACAATAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
3UTR-3UTR TCA 90 bp TTAGTACCTGAAAGTCAACCCAGTGCTCCCTTTGCTTATTATTTGTCTATAAAAGATGAACAAACTTCGTaGAACATCTCCGTACCATGC +
Preference number: 2 (lower is better)
Translates to: LVPESQPSAPFAYYLSIKDEQTS*NISVPC
Trigger: GCATGGTACGGAGATGTTTCACGAAGTTTGTTCATC...TTTTATAGACAAATAATAAGCAAAGGGAGCACTGGGTTGACTTTCAGGTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
3UTR CAA 90 bp TTTCCAGTATCTTCAATGGTAGGGATGAAGGTCATTTCCAAACTTTaGTTCTCTAGAGATTTCATATCCGTATCCTCCAAAAACTCTATA +
Preference number: 2 (lower is better)
Translates to: FPVSSMVGMKVISKL*FSRDFISVSSKNSI
Trigger: TATAGAGTTTTTGGAGGATACGGATATGAAATCTCTAGAGAACAAAAGTTTGGAAATGACCTTCATCCCTACCATTGAAGATACTGGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR CCA 72 bp TCTCAAAACTCACAGGGCTCAGGGTCAGCGTGGAATTaGTCCCCTCACTCCTCACCTTCCCGCTCAGAGGGC +
Preference number: 3 (lower is better)
Translates to: SQNSQGSGSAWN*SPHSSPSRSEG
Trigger: GCCCTCTGAGCGGGAAGGTGAGGAGTGAGGGGACCAATTCCACGCTGACCCTGAGCCCTGTGAGTTTTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR CAA 90 bp TGTAGCTCCCCGTTAGGGAGCTGCCTGCTCCACAGGATTTTCGGAGCAGGAAAGAGGGTCAGCGTGGAATaGGTCCCCTCACTCCTCACC +
Preference number: 3 (lower is better)
Translates to: CSSPLGSCLLHRIFGAGKRVSVE*VPSLLT
Trigger: GGTGAGGAGTGAGGGGACCAATTCCACGCTGACCCT...CTTTCCTGCTCCGAAAATCCTGTGGAGCAGGCAGCTCCCTAACGGGGAGCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR GCA 72 bp TTCTCAGAAAGAGGCTGTAGCTCCCCGTTAGGGAGCTaGCTGCTCCACAGGATTTTCGGAGCAGGAAAGCCC +
Preference number: 3 (lower is better)
Translates to: FSERGCSSPLGS*LLHRIFGAGKP
Trigger: GGGCTTTCCTGCTCCGAAAATCCTGTGGAGCAGGCAGCTCCCTAACGGGGAGCTACAGCCTCTTTCTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR TCA 72 bp GGATTCACAGCCCATGACACTACATGTCAACATGACTaGGTCTCCAATCTGAGCAGCAATCCGGGGTCCAGG +
Preference number: 3 (lower is better)
Translates to: GFTAHDTTCQHD*VSNLSSNPGSR
Trigger: CCTGGACCCCGGATTGCTGCTCAGATTGGAGACTCAGTCATGTTGACATGTAGTGTCATGGGCTGTGAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR CCA 72 bp TACTCCAGAAAATCTCTGGAGCTGGTAGACCCTCGCTaGAACAGGTCATGGTCACAGAGCCACCTTCTTGCA +
Preference number: 3 (lower is better)
Translates to: YSRKSLELVDPR*NRSWSQSHLLA
Trigger: TGCAAGAAGGTGGCTCTGTGACCATGACCTGTTCCAGCGAGGGTCTACCAGCTCCAGAGATTTTCTGGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR CCA 72 bp TGCCTGCTCCACAGGATTTTCGGAGCAGGAAAGCCCTaGCTCAAGCATGTCATATTCACAGAACTGCCTTCC +
Preference number: 3 (lower is better)
Translates to: CLLHRIFGAGKP*LKHVIFTELPS
Trigger: GGAAGGCAGTTCTGTGAATATGACATGCTTGAGCCAGGGCTTTCCTGCTCCGAAAATCCTGTGGAGCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR CAA 90 bp CAGCTTACAGTGACAGAGCTCCCATTCACGAGGCCACCACTCATCTCGATTTCTCACAGAGCCACCTTCTaGCAGCTTTGTGGATGGATT +
Preference number: 3 (lower is better)
Translates to: QLTVTELPFTRPPLISISHRATF*QLCGWI
Trigger: AATCCATCCACAAAGCTGCAAGAAGGTGGCTCTGTG...AGAAATCGAGATGAGTGGTGGCCTCGTGAATGGGAGCTCTGTCACTGTAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR TCA 72 bp ATGACACTACATGTCAACATGACTGAGTCTCCAATCTaGGCAGCAATCCGGGGTCCAGGGGAGATCTCAACA +
Preference number: 3 (lower is better)
Translates to: MTLHVNMTESPI*AAIRGPGEIST
Trigger: TGTTGAGATCTCCCCTGGACCCCGGATTGCTGCTCAGATTGGAGACTCAGTCATGTTGACATGTAGTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR CAA 90 bp CAGGATTTTCGGAGCAGGAAAGCCCTGGCTCAAGCATGTCATATTCACAGAACTGCCACATTGGGAAAGTaGCACAGGAGTCTGATGAAC +
Preference number: 3 (lower is better)
Translates to: QDFRSRKALAQACHIHRTATLGK*HRSLMN
Trigger: GTTCATCAGACTCCTGTGCAACTTTCCCAATGTGGC...AGTTCTGTGAATATGACATGCTTGAGCCAGGGCTTTCCTGCTCCGAAAATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR CAA 90 bp AGGATTTTCGGAGCAGGAAAGCCCTGGCTCAAGCATGTCATATTCACAGAACTGGTTACTTCCAAACTCTaGGTTTCCAGGGACTTCCTG +
Preference number: 3 (lower is better)
Translates to: RIFGAGKPWLKHVIFTELVTSKL*VSRDFL
Trigger: CAGGAAGTCCCTGGAAACCAAGAGTTTGGAAGTAAC...CAGTTCTGTGAATATGACATGCTTGAGCCAGGGCTTTCCTGCTCCGAAAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR TCA 72 bp TGGCAGTTACTGTTCTTCAGGCAGCAAGTTTTACTTTaGCTTCTTGCTCACAGCAAGGGACATAGATGGGCA +
Preference number: 3 (lower is better)
Translates to: WQLLFFRQQVLL*LLAHSKGHRWA
Trigger: TGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCCTGAAGAACAGTAACTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
3UTR TCA 72 bp GGGAAAGTTGCACAGGAGTCTGATGAACAAACTTCGTaGAACATCTCCGTACCATGCCAGTACTATACAGAG +
Preference number: 3 (lower is better)
Translates to: GKVAQESDEQTS*NISVPCQYYTE
Trigger: CTCTGTATAGTACTGGCATGGTACGGAGATGTTTCACGAAGTTTGTTCATCAGACTCCTGTGCAACTTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
3UTR-3UTR CAA 90 bp GGCAGCAAGTTTTACTTTGACTTCTTGCTCACAGCAAGGGACATAGATGGGCATCTGCCTCTCAGCTCATaGTTTTTCTCAAGGAATGAT +
Preference number: 3 (lower is better)
Translates to: GSKFYFDFLLTARDIDGHLPLSS*FFSRND
Trigger: ATCATTCCTTGAGAAAAACAATGAGCTGAGAGGCAG...ATGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
3UTR-3UTR CAA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGGCCACATTGGGAAAGTaGCACAGGAGTCTGATGAAC +
Preference number: 3 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQATLGK*HRSLMN
Trigger: GTTCATCAGACTCCTGTGCAACTTTCCCAATGTGGC...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
3UTR-3UTR CAA 90 bp CCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTCCAGTTCTCTCATCTaGATGGCAGTTACTGTTCTT +
Preference number: 3 (lower is better)
Translates to: PCQYYTEKPSQPLYHRLRSSSLI*MAVTVL
Trigger: AAGAACAGTAACTGCCATCAAGATGAGAGAACTGGA...CCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
3UTR-3UTR CAA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGGTACTCTGCCTTTGTTaGGGTTCGAATTCCATGTCA +
Preference number: 3 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQVLCLC*GSNSMS
Trigger: TGACATGGAATTCGAACCCAAACAAAGGCAGAGTAC...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR CAA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGCTGCCTCTCAGCTCATaGTTTTTCTCAAGGAATGAT +
Preference number: 3 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQLPLSS*FFSRND
Trigger: ATCATTCCTTGAGAAAAACAATGAGCTGAGAGGCAG...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
3UTR-3UTR CAA 90 bp GAGCCAACTTTGTTTTTAGATTCACATTCATATACTCCCGCATCCTTCAACTGGCTGCCTCTCAGCTCATaGTTTTTCTCAAGGAATGAT +
Preference number: 3 (lower is better)
Translates to: EPTLFLDSHSYTPASFNWLPLSS*FFSRND
Trigger: ATCATTCCTTGAGAAAAACAATGAGCTGAGAGGCAG...CCAGTTGAAGGATGCGGGAGTATATGAATGTGAATCTAAAAACAAAGTTGGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR CAA 90 bp GAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAGTACCTGAAAGTCACCTTCTTGCAGCTTaGTGGATGGATTCACAGAAA +
Preference number: 3 (lower is better)
Translates to: EKPSQPLYHRLRYLVPESHLLAA*WMDSQK
Trigger: TTTCTGTGAATCCATCCACAAAGCTGCAAGAAGGTG...ACTTTCAGGTACTAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR CAA 90 bp GAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAGTACCTGAAAGTTTGCGTACTCTGCCTTaGTTTGGGTTCGAATTCCAT +
Preference number: 3 (lower is better)
Translates to: EKPSQPLYHRLRYLVPESLRTLP*FGFEFH
Trigger: ATGGAATTCGAACCCAAACAAAGGCAGAGTACGCAA...ACTTTCAGGTACTAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR CAA 90 bp GAGCCAACTTTGTTTTTAGATTCACATTCATATACTCCCGCATCCTTCAACTGGATTGACATAAAGTGTTaGCGTACTCTGCCTTTGTTT +
Preference number: 3 (lower is better)
Translates to: EPTLFLDSHSYTPASFNWIDIKC*RTLPLF
Trigger: AAACAAAGGCAGAGTACGCAAACACTTTATGTCAAT...CCAGTTGAAGGATGCGGGAGTATATGAATGTGAATCTAAAAACAAAGTTGGCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR-3UTR CAA 90 bp TTAGTACCTGAAAGTCAACCCAGTGCTCCCTTTGCTTATTATTTGTCTATAAAATCCAGTTCTCTCATCTaGATGGCAGTTACTGTTCTT +
Preference number: 3 (lower is better)
Translates to: LVPESQPSAPFAYYLSIKSSSLI*MAVTVL
Trigger: AAGAACAGTAACTGCCATCAAGATGAGAGAACTGGA...TTTTATAGACAAATAATAAGCAAAGGGAGCACTGGGTTGACTTTCAGGTACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
3UTR TCA 72 bp TATCAAGGATTTGCACAGATAAATAGTGTCTCCAGTTaGACATATCAAGCATTAGCTACACTTTTGACTTCT +
Preference number: 3 (lower is better)
Translates to: YQGFAQINSVSS*TYQALATLLTS
Trigger: AGAAGTCAAAAGTGTAGCTAATGCTTGATATGTTCAACTGGAGACACTATTTATCTGTGCAAATCCTTGATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR CCA 90 bp GCCTTCCTCCAGGATGGAGGAAGGGCTGACCAAGACGGTTGTATCTCTGGGGGCCCACCTGTGTGTGCCTaGGAGGGTATTCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: AFLQDGGRADQDGCISGGPPVCA*EGIQLL
Trigger: CAGGAGCTGAATACCCTCCCAGGCACACACAGGTGG...GCCCCCAGAGATACAACCGTCTTGGTCAGCCCTTCCTCCATCCTGGAGGAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR CAA 72 bp TTCTCAAAACTCACAGGGCTCAGGGTCAGCGTGGAATaGGTCCCCTCACTCCTCACCTTCCCGCTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: FSKLTGLRVSVE*VPSLLTFPLRG
Trigger: CCCTCTGAGCGGGAAGGTGAGGAGTGAGGGGACCAATTCCACGCTGACCCTGAGCCCTGTGAGTTTTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR CAA 72 bp ATCTCCAGCCGGTCAAGGGGGTACACGCTAGGAACCTaGCAGCTTACAGTGACAGAGCTCCCATTCACGAGG +
Preference number: 4 (lower is better)
Translates to: ISSRSRGYTLGT*QLTVTELPFTR
Trigger: CCTCGTGAATGGGAGCTCTGTCACTGTAAGCTGCAAGGTTCCTAGCGTGTACCCCCTTGACCGGCTGGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR CCA 90 bp TGTAGCTCCCCGTTAGGGAGCTGCCTGCTCCACAGGATTTTCGGAGCAGGAAAGGGGACTCACAGCCTGTaGTGCTGCAAGTCAATGAGA +
Preference number: 4 (lower is better)
Translates to: CSSPLGSCLLHRIFGAGKGTHSL*CCKSMR
Trigger: TCTCATTGACTTGCAGCACCACAGGCTGTGAGTCCC...CTTTCCTGCTCCGAAAATCCTGTGGAGCAGGCAGCTCCCTAACGGGGAGCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR CCA 90 bp GCCTTCCTCCAGGATGGAGGAAGGGCTGACCAAGACGGTTGTATCTCTGGGGGCCAGCCTGCCTTACTGTaGGCACAGAATCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: AFLQDGGRADQDGCISGGQPALL*AQNPFH
Trigger: ATGAAATGGATTCTGTGCCCACAGTAAGGCAGGCTG...GCCCCCAGAGATACAACCGTCTTGGTCAGCCCTTCCTCCATCCTGGAGGAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR TCA 90 bp AGGAACCTTGCAGCTTACAGTGACAGAGCTCCCATTCACGAGGCCACCACTCATACTGAGTCTCCAATCTaGGCAGCAATCCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: RNLAAYSDRAPIHEATTHTESPI*AAIRGP
Trigger: TGGACCCCGGATTGCTGCTCAGATTGGAGACTCAGT...ATGAGTGGTGGCCTCGTGAATGGGAGCTCTGTCACTGTAAGCTGCAAGGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR TCA 90 bp GCCTTCCTCCAGGATGGAGGAAGGGCTGACCAAGACGGTTGTATCTCTGGGGGCCAGTGTCTCCTTCTTTaGCACTCTCAGAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: AFLQDGGRADQDGCISGGQCLLL*HSQKEK
Trigger: CTTTTCCTTCTGAGAGTGTCAAAGAAGGAGACACTG...GCCCCCAGAGATACAACCGTCTTGGTCAGCCCTTCCTCCATCCTGGAGGAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR TCA 90 bp TGTAGCTCCCCGTTAGGGAGCTGCCTGCTCCACAGGATTTTCGGAGCAGGAAAGGAGGTATTTAGTACCTaGAAGTCAACCCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: CSSPLGSCLLHRIFGAGKEVFST*KSTQCS
Trigger: GGAGCACTGGGTTGACTTTCAGGTACTAAATACCTC...CTTTCCTGCTCCGAAAATCCTGTGGAGCAGGCAGCTCCCTAACGGGGAGCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR TCA 90 bp ACAGTGACAGAGCTCCCATTCACGAGGCCACCACTCATCTCGATTTCTGGATCTCCTTGCAGCTTACAGTaGCAGAGCTCCCATTCACGA +
Preference number: 4 (lower is better)
Translates to: TVTELPFTRPPLISISGSPCSLQ*QSSHSR
Trigger: TCGTGAATGGGAGCTCTGTCACTGTAAGCTGCAAGG...AGATCCAGAAATCGAGATGAGTGGTGGCCTCGTGAATGGGAGCTCTGTCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR GCA 90 bp CACATTCATATACTCCCGCATCCTTCAACTGGGCCTTTCGGATGGTATAGGCGCACTCACAGCCTGTGGTaGTGCAAGTCAATGAGACGG +
Preference number: 4 (lower is better)
Translates to: HIHILPHPSTGPFGWYRRTHSLW*CKSMRR
Trigger: CCGTCTCATTGACTTGCAGCACCACAGGCTGTGAGT...GCGCCTATACCATCCGAAAGGCCCAGTTGAAGGATGCGGGAGTATATGAATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR CCA 90 bp ACAGTGACAGAGCTCCCATTCACGAGGCCACCACTCATCTCGATTTCTGGATCTCGCTGGAACAGGTCATaGTCACAGAGCCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: TVTELPFTRPPLISISGSRWNRS*SQSHLL
Trigger: AAGAAGGTGGCTCTGTGACCATGACCTGTTCCAGCG...AGATCCAGAAATCGAGATGAGTGGTGGCCTCGTGAATGGGAGCTCTGTCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR TCA 90 bp GCCTTCCTCCAGGATGGAGGAAGGGCTGACCAAGACGGTTGTATCTCTGGGGGCAACTGTATTCTTGGGTaGTATGTAGACTTGCAATTC +
Preference number: 4 (lower is better)
Translates to: AFLQDGGRADQDGCISGGNCILG*YVDLQF
Trigger: GAATTGCAAGTCTACATATCACCCAAGAATACAGTT...GCCCCCAGAGATACAACCGTCTTGGTCAGCCCTTCCTCCATCCTGGAGGAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR TCA 90 bp ACCTTGCAGCTTACAGTGACAGAGCTCCCATTCACGAGGCCACCACTCATCTCGCCAGTTCTCTCATCTTaGTGGCAGTTACTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: TLQLTVTELPFTRPPLISPVLSS*WQLLFF
Trigger: GAAGAACAGTAACTGCCATCAAGATGAGAGAACTGG...CGAGATGAGTGGTGGCCTCGTGAATGGGAGCTCTGTCACTGTAAGCTGCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR GCA 90 bp ACCTTGCAGCTTACAGTGACAGAGCTCCCATTCACGAGGCCACCACTCATCTCGCCTAGATTCACAAGTTaGTGTGCACAGGTAAGAGTG +
Preference number: 4 (lower is better)
Translates to: TLQLTVTELPFTRPPLISPRFTS*CAQVRV
Trigger: CACTCTTACCTGTGCACAGCAACTTGTGAATCTAGG...CGAGATGAGTGGTGGCCTCGTGAATGGGAGCTCTGTCACTGTAAGCTGCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR TCA 90 bp GGCAGCAAGTTTTACTTTGACTTCTTGCTCACAGCAAGGGACATAGATGGGCATACTGAGTCTCCAATCTaGGCAGCAATCCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: GSKFYFDFLLTARDIDGHTESPI*AAIRGP
Trigger: TGGACCCCGGATTGCTGCTCAGATTGGAGACTCAGT...ATGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294728.7
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp GGGGTACACGCTAGGAACCTTGCAGCTTACAGTGACAGAGCTCCCATTCACGAGAATTCTTTTACAGCCTaGCTTACTGTGGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: GVHARNLAAYSDRAPIHENSFTA*LTVGTE
Trigger: TTCTGTGCCCACAGTAAGGCAGGCTGTAAAAGAATT...CTCGTGAATGGGAGCTCTGTCACTGTAAGCTGCAAGGTTCCTAGCGTGTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR GCA 90 bp CAGCTTACAGTGACAGAGCTCCCATTCACGAGGCCACCACTCATCTCGATTTCTACAGAGCCACCTTCTTaGAGCTTTGTGGATGGATTC +
Preference number: 4 (lower is better)
Translates to: QLTVTELPFTRPPLISISTEPPS*SFVDGF
Trigger: GAATCCATCCACAAAGCTGCAAGAAGGTGGCTCTGT...AGAAATCGAGATGAGTGGTGGCCTCGTGAATGGGAGCTCTGTCACTGTAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR GCA 90 bp CACATTCATATACTCCCGCATCCTTCAACTGGGCCTTTCGGATGGTATAGGCGCTCATATTCACAGAACTaGCTTCCTCCAGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: HIHILPHPSTGPFGWYRRSYSQN*LPPGWR
Trigger: CCTCCATCCTGGAGGAAGGCAGTTCTGTGAATATGA...GCGCCTATACCATCCGAAAGGCCCAGTTGAAGGATGCGGGAGTATATGAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR CCA 90 bp ACATTGGGAAAGTTGCACAGGAGTCTGATGAACAAACTTCGTGAAACATCTCCGCCACCTGTGTGTGCCTaGGAGGGTATTCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: TLGKLHRSLMNKLRETSPPPVCA*EGIQLL
Trigger: CAGGAGCTGAATACCCTCCCAGGCACACACAGGTGG...CGGAGATGTTTCACGAAGTTTGTTCATCAGACTCCTGTGCAACTTTCCCAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp GGGGTACACGCTAGGAACCTTGCAGCTTACAGTGACAGAGCTCCCATTCACGAGATTTTTAGGCCACATTaGGAAAGTTGCACAGGAGTC +
Preference number: 4 (lower is better)
Translates to: GVHARNLAAYSDRAPIHEIFRPH*ESCTGV
Trigger: GACTCCTGTGCAACTTTCCCAATGTGGCCTAAAAAT...CTCGTGAATGGGAGCTCTGTCACTGTAAGCTGCAAGGTTCCTAGCGTGTACCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR GCA 90 bp CCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTCCCCGTTAGGGAGCTaGCTGCTCCACAGGATTTTC +
Preference number: 4 (lower is better)
Translates to: PCQYYTEKPSQPLYHRLRSPLGS*LLHRIF
Trigger: GAAAATCCTGTGGAGCAGGCAGCTCCCTAACGGGGA...CCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp ACATTGGGAAAGTTGCACAGGAGTCTGATGAACAAACTTCGTGAAACATCTCCGTCCCCGTTAGGGAGCTaGCTGCTCCACAGGATTTTC +
Preference number: 4 (lower is better)
Translates to: TLGKLHRSLMNKLRETSPSPLGS*LLHRIF
Trigger: GAAAATCCTGTGGAGCAGGCAGCTCCCTAACGGGGA...CGGAGATGTTTCACGAAGTTTGTTCATCAGACTCCTGTGCAACTTTCCCAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp CCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGCTGGTAGACCCTCGCTaGAACAGGTCATGGTCACAG +
Preference number: 4 (lower is better)
Translates to: PCQYYTEKPSQPLYHRLRLVDPR*NRSWSQ
Trigger: CTGTGACCATGACCTGTTCCAGCGAGGGTCTACCAG...CCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGGCTCAGGGTCAGCGTaGAATTGGTCCCCTCACTCC +
Preference number: 4 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTGSGSA*NWSPHS
Trigger: GGAGTGAGGGGACCAATTCCACGCTGACCCTGAGCC...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294728.7
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp CAGGATTTTCGGAGCAGGAAAGCCCTGGCTCAAGCATGTCATATTCACAGAACTGGAGCAGGAAAGCCCTaGCTCAAGCATGTCATATTC +
Preference number: 4 (lower is better)
Translates to: QDFRSRKALAQACHIHRTGAGKP*LKHVIF
Trigger: GAATATGACATGCTTGAGCCAGGGCTTTCCTGCTCC...AGTTCTGTGAATATGACATGCTTGAGCCAGGGCTTTCCTGCTCCGAAAATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
3UTR CAA 72 bp CTCGCTGGAACAGGTCATGGTCACAGAGCCACCTTCTaGCAGCTTTGTGGATGGATTCACAGAAATAACTGT +
Preference number: 4 (lower is better)
Translates to: LAGTGHGHRATF*QLCGWIHRNNC
Trigger: ACAGTTATTTCTGTGAATCCATCCACAAAGCTGCAAGAAGGTGGCTCTGTGACCATGACCTGTTCCAGCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR TCA 90 bp CACATTCATATACTCCCGCATCCTTCAACTGGGCCTTTCGGATGGTATAGGCGCTATCCAAAGTATATTTaGGGCTCCAAGGATCACGAC +
Preference number: 4 (lower is better)
Translates to: HIHILPHPSTGPFGWYRRYPKYI*GSKDHD
Trigger: GTCGTGATCCTTGGAGCCTCAAATATACTTTGGATA...GCGCCTATACCATCCGAAAGGCCCAGTTGAAGGATGCGGGAGTATATGAATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR TCA 90 bp CAGCTTACAGTGACAGAGCTCCCATTCACGAGGCCACCACTCATCTCGATTTCTACGGAGTCACCAATCTaGGCAAGATATCTAGATTCT +
Preference number: 4 (lower is better)
Translates to: QLTVTELPFTRPPLISISTESPI*ARYLDS
Trigger: AGAATCTAGATATCTTGCTCAGATTGGTGACTCCGT...AGAAATCGAGATGAGTGGTGGCCTCGTGAATGGGAGCTCTGTCACTGTAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR TCA 90 bp ACCTTGCAGCTTACAGTGACAGAGCTCCCATTCACGAGGCCACCACTCATCTCGATATGTAACTTAGCCTaGCAAACAAGAGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: TLQLTVTELPFTRPPLISICNLA*QTRAFP
Trigger: TGGAAAAGCTCTTGTTTGTCAGGCTAAGTTACATAT...CGAGATGAGTGGTGGCCTCGTGAATGGGAGCTCTGTCACTGTAAGCTGCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR TCA 90 bp CATAGATGGGCATTTCTTTCCAAGTTCAATACATTCAGGGAAGTCTGCCTCTCAGGATGGAGGAAGGGCTaGCCAAGACGGTTGTATCTC +
Preference number: 4 (lower is better)
Translates to: HRWAFLSKFNTFREVCLSGWRKG*PRRLYL
Trigger: GAGATACAACCGTCTTGGTCAGCCCTTCCTCCATCC...TGAGAGGCAGACTTCCCTGAATGTATTGAACTTGGAAAGAAATGCCCATCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp TCTCCGTACCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGATGGAGGAAGGGCTaGCCAAGACGGTTGTATCTC +
Preference number: 4 (lower is better)
Translates to: SPYHASTIQRNPVNHYTIGWRKG*PRRLYL
Trigger: GAGATACAACCGTCTTGGTCAGCCCTTCCTCCATCC...TATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGGTACGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp CCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGACTCACAGCCTGTGGTaGTGCAAGTCAATGAGACGG +
Preference number: 4 (lower is better)
Translates to: PCQYYTEKPSQPLYHRLRTHSLW*CKSMRR
Trigger: CCGTCTCATTGACTTGCAGCACCACAGGCTGTGAGT...CCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp TCTCCGTACCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATATCCCCGTTAGGGAGCTaGCTGCTCCACAGGATTTTC +
Preference number: 4 (lower is better)
Translates to: SPYHASTIQRNPVNHYTISPLGS*LLHRIF
Trigger: GAAAATCCTGTGGAGCAGGCAGCTCCCTAACGGGGA...TATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGGTACGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp GGCAGCAAGTTTTACTTTGACTTCTTGCTCACAGCAAGGGACATAGATGGGCATAAGAGCCTGTGGTGCTaGAAGTCAATGAGACGGAGT +
Preference number: 4 (lower is better)
Translates to: GSKFYFDFLLTARDIDGHKSLWC*KSMRRS
Trigger: ACTCCGTCTCATTGACTTGCAGCACCACAGGCTCTT...ATGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370119.8
CDS-3UTR CCA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGCCACCTGTGTGTGCCTaGGAGGGTATTCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQPPVCA*EGIQLL
Trigger: CAGGAGCTGAATACCCTCCCAGGCACACACAGGTGG...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTCCACCTGTGTGTGCCTaGGAGGGTATTCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTPPVCA*EGIQLL
Trigger: CAGGAGCTGAATACCCTCCCAGGCACACACAGGTGG...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp ACATTGGGAAAGTTGCACAGGAGTCTGATGAACAAACTTCGTGAAACATCTCCGGGGACTCACAGCCTGTaGTGCTGCAAGTCAATGAGA +
Preference number: 4 (lower is better)
Translates to: TLGKLHRSLMNKLRETSPGTHSL*CCKSMR
Trigger: TCTCATTGACTTGCAGCACCACAGGCTGTGAGTCCC...CGGAGATGTTTCACGAAGTTTGTTCATCAGACTCCTGTGCAACTTTCCCAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp CAGGATTTTCGGAGCAGGAAAGCCCTGGCTCAAGCATGTCATATTCACAGAACTTCTCCAAGAGAAAAATaGGGACTCACAGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: QDFRSRKALAQACHIHRTSPREK*GLTACG
Trigger: ACCACAGGCTGTGAGTCCCCATTTTTCTCTTGGAGA...AGTTCTGTGAATATGACATGCTTGAGCCAGGGCTTTCCTGCTCCGAAAATCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR CCA 90 bp ACATTGGGAAAGTTGCACAGGAGTCTGATGAACAAACTTCGTGAAACATCTCCGCGCTGGAACAGGTCATaGTCACAGAGCCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: TLGKLHRSLMNKLRETSPRWNRS*SQSHLL
Trigger: AAGAAGGTGGCTCTGTGACCATGACCTGTTCCAGCG...CGGAGATGTTTCACGAAGTTTGTTCATCAGACTCCTGTGCAACTTTCCCAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp GGCAGCAAGTTTTACTTTGACTTCTTGCTCACAGCAAGGGACATAGATGGGCATTCTCCAGGAGAAAGATaGGGATTCACAGCCCATGAC +
Preference number: 4 (lower is better)
Translates to: GSKFYFDFLLTARDIDGHSPGER*GFTAHD
Trigger: GTCATGGGCTGTGAATCCCCATCTTTCTCCTGGAGA...ATGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294728.7
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp ATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTGGGTCAGCGTGGAATTaGTCCCCTCACTCCTCACCT +
Preference number: 4 (lower is better)
Translates to: IYRSRNSSSSLILMAVTVGSAWN*SPHSSP
Trigger: AGGTGAGGAGTGAGGGGACCAATTCCACGCTGACCC...AACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294728.7
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp GAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAGTACCTGAAAGTGGCTCAGGGTCAGCGTaGAATTGGTCCCCTCACTCC +
Preference number: 4 (lower is better)
Translates to: EKPSQPLYHRLRYLVPESGSGSA*NWSPHS
Trigger: GGAGTGAGGGGACCAATTCCACGCTGACCCTGAGCC...ACTTTCAGGTACTAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294728.7
ENST00000650339.1
CDS-3UTR TCA 90 bp CATAGATGGGCATTTCTTTCCAAGTTCAATACATTCAGGGAAGTCTGCCTCTCACCTTGCAGCTTACAGTaGCAGAGCTCCCATTCACGA +
Preference number: 4 (lower is better)
Translates to: HRWAFLSKFNTFREVCLSPCSLQ*QSSHSR
Trigger: TCGTGAATGGGAGCTCTGTCACTGTAAGCTGCAAGG...TGAGAGGCAGACTTCCCTGAATGTATTGAACTTGGAAAGAAATGCCCATCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp TTGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACGGATGGAGGAAGGGCTaGCCAAGACGGTTGTATCTC +
Preference number: 4 (lower is better)
Translates to: LYIQIKELLQFSHLDGSYGWRKG*PRRLYL
Trigger: GAGATACAACCGTCTTGGTCAGCCCTTCCTCCATCC...GTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp AGGAACCTTGCAGCTTACAGTGACAGAGCTCCCATTCACGAGGCCACCACTCATAATAGTGTCTCCAGTTaGACATATCAAGCATTAGCT +
Preference number: 4 (lower is better)
Translates to: RNLAAYSDRAPIHEATTHNSVSS*TYQALA
Trigger: AGCTAATGCTTGATATGTTCAACTGGAGACACTATT...ATGAGTGGTGGCCTCGTGAATGGGAGCTCTGTCACTGTAAGCTGCAAGGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR GCA 90 bp CATAGATGGGCATTTCTTTCCAAGTTCAATACATTCAGGGAAGTCTGCCTCTCAACTCACAGCCTGTGGTaGTGCAAGTCAATGAGACGG +
Preference number: 4 (lower is better)
Translates to: HRWAFLSKFNTFREVCLSTHSLW*CKSMRR
Trigger: CCGTCTCATTGACTTGCAGCACCACAGGCTGTGAGT...TGAGAGGCAGACTTCCCTGAATGTATTGAACTTGGAAAGAAATGCCCATCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp ATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTTCCCCGTTAGGGAGCTaGCTGCTCCACAGGATTTTC +
Preference number: 4 (lower is better)
Translates to: IYRSRNSSSSLILMAVTVSPLGS*LLHRIF
Trigger: GAAAATCCTGTGGAGCAGGCAGCTCCCTAACGGGGA...AACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp GAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAGTACCTGAAAGTCCACCTGTGTGTGCCTaGGAGGGTATTCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: EKPSQPLYHRLRYLVPESPPVCA*EGIQLL
Trigger: CAGGAGCTGAATACCCTCCCAGGCACACACAGGTGG...ACTTTCAGGTACTAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp ACCTTGCAGCTTACAGTGACAGAGCTCCCATTCACGAGGCCACCACTCATCTCGAAGATATCTAGATTCTaGGGTGGTCTCGATTTTAAA +
Preference number: 4 (lower is better)
Translates to: TLQLTVTELPFTRPPLISKISRF*GGLDFK
Trigger: TTTAAAATCGAGACCACCCCAGAATCTAGATATCTT...CGAGATGAGTGGTGGCCTCGTGAATGGGAGCTCTGTCACTGTAAGCTGCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR CCA 90 bp GGCAGCAAGTTTTACTTTGACTTCTTGCTCACAGCAAGGGACATAGATGGGCATCAGCCTGCCTTACTGTaGGCACAGAATCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: GSKFYFDFLLTARDIDGHQPALL*AQNPFH
Trigger: ATGAAATGGATTCTGTGCCCACAGTAAGGCAGGCTG...ATGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp TATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTCTGGTAGACCCTCGCTaGAACAGGTCATGGTCACAG +
Preference number: 4 (lower is better)
Translates to: YIQIKELLQFSHLDGSYCLVDPR*NRSWSQ
Trigger: CTGTGACCATGACCTGTTCCAGCGAGGGTCTACCAG...ACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp TTGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACCTGGTAGACCCTCGCTaGAACAGGTCATGGTCACAG +
Preference number: 4 (lower is better)
Translates to: LYIQIKELLQFSHLDGSYLVDPR*NRSWSQ
Trigger: CTGTGACCATGACCTGTTCCAGCGAGGGTCTACCAG...GTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp CAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAGGCTCAGGGTCAGCGTaGAATTGGTCCCCTCACTCC +
Preference number: 4 (lower is better)
Translates to: QYYTEKPSQPLYHRLRYLGSGSA*NWSPHS
Trigger: GGAGTGAGGGGACCAATTCCACGCTGACCCTGAGCC...TAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294728.7
ENST00000650339.1
CDS-3UTR CCA 90 bp ACATTGGGAAAGTTGCACAGGAGTCTGATGAACAAACTTCGTGAAACATCTCCGGGAGCAGGAAAGCCCTaGCTCAAGCATGTCATATTC +
Preference number: 4 (lower is better)
Translates to: TLGKLHRSLMNKLRETSPGAGKP*LKHVIF
Trigger: GAATATGACATGCTTGAGCCAGGGCTTTCCTGCTCC...CGGAGATGTTTCACGAAGTTTGTTCATCAGACTCCTGTGCAACTTTCCCAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR TCA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGGGTGCTGCAAGTCAATaGGACGGAGTCACCAATCTG +
Preference number: 4 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQGAASQ*DGVTNL
Trigger: CAGATTGGTGACTCCGTCTCATTGACTTGCAGCACC...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp CCTCTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCAGGTGCTGCAAGTCAATaGGACGGAGTCACCAATCTG +
Preference number: 4 (lower is better)
Translates to: PLSSLFFSRNDEQYQGFAGAASQ*DGVTNL
Trigger: CAGATTGGTGACTCCGTCTCATTGACTTGCAGCACC...TGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp GAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAGTACCTGAAAGTACTGAGTCTCCAATCTaGGCAGCAATCCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: EKPSQPLYHRLRYLVPESTESPI*AAIRGP
Trigger: TGGACCCCGGATTGCTGCTCAGATTGGAGACTCAGT...ACTTTCAGGTACTAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294728.7
ENST00000650339.1
CDS-3UTR TCA 90 bp ACATTGGGAAAGTTGCACAGGAGTCTGATGAACAAACTTCGTGAAACATCTCCGACATGTCAACATGACTaGGTCTCCAATCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: TLGKLHRSLMNKLRETSPTCQHD*VSNLSS
Trigger: GCTGCTCAGATTGGAGACTCAGTCATGTTGACATGT...CGGAGATGTTTCACGAAGTTTGTTCATCAGACTCCTGTGCAACTTTCCCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294728.7
ENST00000650339.1
CDS-3UTR TCA 90 bp TTGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACCCTTGCAGCTTACAGTaGCAGAGCTCCCATTCACGA +
Preference number: 4 (lower is better)
Translates to: LYIQIKELLQFSHLDGSYPCSLQ*QSSHSR
Trigger: TCGTGAATGGGAGCTCTGTCACTGTAAGCTGCAAGG...GTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGCCTTGCAGCTTACAGTaGCAGAGCTCCCATTCACGA +
Preference number: 4 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQPCSLQ*QSSHSR
Trigger: TCGTGAATGGGAGCTCTGTCACTGTAAGCTGCAAGG...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp CCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGCTCTGGGGGCAACATTaGCATAAAGTGTTTGCGTAC +
Preference number: 4 (lower is better)
Translates to: PCQYYTEKPSQPLYHRLRLWGQH*HKVFAY
Trigger: GTACGCAAACACTTTATGTCAATGTTGCCCCCAGAG...CCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000650339.1
CDS-3UTR TCA 90 bp GGCAGCAAGTTTTACTTTGACTTCTTGCTCACAGCAAGGGACATAGATGGGCATCAGTGTCTCCTTCTTTaGCACTCTCAGAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: GSKFYFDFLLTARDIDGHQCLLL*HSQKEK
Trigger: CTTTTCCTTCTGAGAGTGTCAAAGAAGGAGACACTG...ATGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGCACAGCCTGTGGTGCTaGAAGTCAATGAGACGGAGT +
Preference number: 4 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQHSLWC*KSMRRS
Trigger: ACTCCGTCTCATTGACTTGCAGCACCACAGGCTGTG...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp CAGGATTTTCGGAGCAGGAAAGCCCTGGCTCAAGCATGTCATATTCACAGAACTACATTCAGGGAAGTCTaGCTCTCAGCTCATTGTTTT +
Preference number: 4 (lower is better)
Translates to: QDFRSRKALAQACHIHRTTFREV*LSAHCF
Trigger: AAAACAATGAGCTGAGAGGCAGACTTCCCTGAATGT...AGTTCTGTGAATATGACATGCTTGAGCCAGGGCTTTCCTGCTCCGAAAATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR GCA 90 bp CATAGATGGGCATTTCTTTCCAAGTTCAATACATTCAGGGAAGTCTGCCTCTCAGAAAAGAGCCTGTGGTaGTGCAAGTCAATGAGACGG +
Preference number: 4 (lower is better)
Translates to: HRWAFLSKFNTFREVCLSEKSLW*CKSMRR
Trigger: CCGTCTCATTGACTTGCAGCACCACAGGCTCTTTTC...TGAGAGGCAGACTTCCCTGAATGTATTGAACTTGGAAAGAAATGCCCATCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370119.8
CDS-3UTR CCA 90 bp CCTCTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCAGGGACTCACAGCCTGTaGTGCTGCAAGTCAATGAGA +
Preference number: 4 (lower is better)
Translates to: PLSSLFFSRNDEQYQGFAGTHSL*CCKSMR
Trigger: TCTCATTGACTTGCAGCACCACAGGCTGTGAGTCCC...TGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp ACATTGGGAAAGTTGCACAGGAGTCTGATGAACAAACTTCGTGAAACATCTCCGTCTCCAAGAGAAAAATaGGGACTCACAGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: TLGKLHRSLMNKLRETSPSPREK*GLTACG
Trigger: ACCACAGGCTGTGAGTCCCCATTTTTCTCTTGGAGA...CGGAGATGTTTCACGAAGTTTGTTCATCAGACTCCTGTGCAACTTTCCCAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTCGCTGGAACAGGTCATaGTCACAGAGCCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTRWNRS*SQSHLL
Trigger: AAGAAGGTGGCTCTGTGACCATGACCTGTTCCAGCG...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp ATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTCGCTGGAACAGGTCATaGTCACAGAGCCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: IYRSRNSSSSLILMAVTVRWNRS*SQSHLL
Trigger: AAGAAGGTGGCTCTGTGACCATGACCTGTTCCAGCG...AACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp CCTCTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACGCTGGAACAGGTCATaGTCACAGAGCCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: PLSSLFFSRNDEQYQGFARWNRS*SQSHLL
Trigger: AAGAAGGTGGCTCTGTGACCATGACCTGTTCCAGCG...TGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp CATAGATGGGCATTTCTTTCCAAGTTCAATACATTCAGGGAAGTCTGCCTCTCATCTCCAGGAGAAAGATaGGGATTCACAGCCCATGAC +
Preference number: 4 (lower is better)
Translates to: HRWAFLSKFNTFREVCLSSPGER*GFTAHD
Trigger: GTCATGGGCTGTGAATCCCCATCTTTCTCCTGGAGA...TGAGAGGCAGACTTCCCTGAATGTATTGAACTTGGAAAGAAATGCCCATCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294728.7
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp TTCCAATGGCAGGTATTATTAAGGAGGATGCAAAATAGAGCACGAGAAGCTCAGTCTCCAGGAGAAAGATaGGGATTCACAGCCCATGAC +
Preference number: 4 (lower is better)
Translates to: FQWQVLLRRMQNRAREAQSPGER*GFTAHD
Trigger: GTCATGGGCTGTGAATCCCCATCTTTCTCCTGGAGA...CTGAGCTTCTCGTGCTCTATTTTGCATCCTCCTTAATAATACCTGCCATTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR CCA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATAGGGTCAGCGTGGAATTaGTCCCCTCACTCCTCACCT +
Preference number: 4 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQIGSAWN*SPHSSP
Trigger: AGGTGAGGAGTGAGGGGACCAATTCCACGCTGACCC...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294728.7
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp GAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAGTACCTGAAAGTGGTGCTGCAAGTCAATaGGACGGAGTCACCAATCTG +
Preference number: 4 (lower is better)
Translates to: EKPSQPLYHRLRYLVPESGAASQ*DGVTNL
Trigger: CAGATTGGTGACTCCGTCTCATTGACTTGCAGCACC...ACTTTCAGGTACTAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR TCA 90 bp CATAGATGGGCATTTCTTTCCAAGTTCAATACATTCAGGGAAGTCTGCCTCTCAAGAGGGCCACTCAAATaGATCTCTGGATCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: HRWAFLSKFNTFREVCLSRGPLK*ISGSLG
Trigger: TCCTAAGGATCCAGAGATTCATTTGAGTGGCCCTCT...TGAGAGGCAGACTTCCCTGAATGTATTGAACTTGGAAAGAAATGCCCATCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
CDS-3UTR TCA 90 bp TGCCTTACTGTGGGCACAGAATCCATTTCATCAATGTGTAATTTAGCTCGGCAAACATGTCAACATGACTaGGTCTCCAATCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: CLTVGTESISSMCNLARQTCQHD*VSNLSS
Trigger: GCTGCTCAGATTGGAGACTCAGTCATGTTGACATGT...TTGCCGAGCTAAATTACACATTGATGAAATGGATTCTGTGCCCACAGTAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR TCA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTTGGATCTCTAGGGAATaGGTAGAGCTCCACCTGGAT +
Preference number: 4 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTWISRE*VELHLD
Trigger: ATCCAGGTGGAGCTCTACTCATTCCCTAGAGATCCA...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294728.7
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp GAGCCAACTTTGTTTTTAGATTCACATTCATATACTCCCGCATCCTTCAACTGGTGGATCTCTAGGGAATaGGTAGAGCTCCACCTGGAT +
Preference number: 4 (lower is better)
Translates to: EPTLFLDSHSYTPASFNWWISRE*VELHLD
Trigger: ATCCAGGTGGAGCTCTACTCATTCCCTAGAGATCCA...CCAGTTGAAGGATGCGGGAGTATATGAATGTGAATCTAAAAACAAAGTTGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR TCA 90 bp CATAGATGGGCATTTCTTTCCAAGTTCAATACATTCAGGGAAGTCTGCCTCTCACTCTGGGGGCAACATTaGCATAAAGTGTTTGCGTAC +
Preference number: 4 (lower is better)
Translates to: HRWAFLSKFNTFREVCLSLWGQH*HKVFAY
Trigger: GTACGCAAACACTTTATGTCAATGTTGCCCCCAGAG...TGAGAGGCAGACTTCCCTGAATGTATTGAACTTGGAAAGAAATGCCCATCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp AGGATTTTCGGAGCAGGAAAGCCCTGGCTCAAGCATGTCATATTCACAGAACTGTTCTACAAGACTATATaGCCCCTTCATGTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: RIFGAGKPWLKHVIFTELFYKTI*PLHVGF
Trigger: AAAGCCAACATGAAGGGGTCATATAGTCTTGTAGAA...CAGTTCTGTGAATATGACATGCTTGAGCCAGGGCTTTCCTGCTCCGAAAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR TCA 90 bp CCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTCTCTGGGGGCAACTTaGACAATTAATTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: PCQYYTEKPSQPLYHRLRSLGAT*TINSTS
Trigger: AGAGGTGGAATTAATTGTTCAAGTTGCCCCCAGAGA...CCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370115.1
CDS-3UTR GCA 90 bp TCTCCGTACCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAACAGAGCCACCTTCTTaGAGCTTTGTGGATGGATTC +
Preference number: 4 (lower is better)
Translates to: SPYHASTIQRNPVNHYTITEPPS*SFVDGF
Trigger: GAATCCATCCACAAAGCTGCAAGAAGGTGGCTCTGT...TATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGGTACGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp GGCAGCAAGTTTTACTTTGACTTCTTGCTCACAGCAAGGGACATAGATGGGCATACATTCAGGGAAGTCTaGCTCTCAGCTCATTGTTTT +
Preference number: 4 (lower is better)
Translates to: GSKFYFDFLLTARDIDGHTFREV*LSAHCF
Trigger: AAAACAATGAGCTGAGAGGCAGACTTCCCTGAATGT...ATGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp CAGGATTTTCGGAGCAGGAAAGCCCTGGCTCAAGCATGTCATATTCACAGAACTAACATCTCCGTACCATaGCAGTACTATACAGAGAAA +
Preference number: 4 (lower is better)
Translates to: QDFRSRKALAQACHIHRTNISVP*QYYTEK
Trigger: TTTCTCTGTATAGTACTGGCATGGTACGGAGATGTT...AGTTCTGTGAATATGACATGCTTGAGCCAGGGCTTTCCTGCTCCGAAAATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR CCA 90 bp TCTCCGTACCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAAGAGGGCTGTCTATCTaGGTTCTCCAGGAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: SPYHASTIQRNPVNHYTIRGLSI*VLQEKD
Trigger: ATCTTTCTCCTGGAGAACCCAGATAGACAGCCCTCT...TATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGGTACGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294728.7
ENST00000650339.1
CDS-3UTR CCA 90 bp TTCCAATGGCAGGTATTATTAAGGAGGATGCAAAATAGAGCACGAGAAGCTCAGAGAGGGCTGTCTATCTaGGTTCTCCAGGAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: FQWQVLLRRMQNRAREAQRGLSI*VLQEKD
Trigger: ATCTTTCTCCTGGAGAACCCAGATAGACAGCCCTCT...CTGAGCTTCTCGTGCTCTATTTTGCATCCTCCTTAATAATACCTGCCATTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR CCA 90 bp ATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTGGAGCAGGAAAGCCCTaGCTCAAGCATGTCATATTC +
Preference number: 4 (lower is better)
Translates to: IYRSRNSSSSLILMAVTVGAGKP*LKHVIF
Trigger: GAATATGACATGCTTGAGCCAGGGCTTTCCTGCTCC...AACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp GGCAGCAAGTTTTACTTTGACTTCTTGCTCACAGCAAGGGACATAGATGGGCATATTTTTAGGCCACATTaGGAAAGTTGCACAGGAGTC +
Preference number: 4 (lower is better)
Translates to: GSKFYFDFLLTARDIDGHIFRPH*ESCTGV
Trigger: GACTCCTGTGCAACTTTCCCAATGTGGCCTAAAAAT...ATGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR TCA 90 bp CAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAGGTGCTGCAAGTCAATaGGACGGAGTCACCAATCTG +
Preference number: 4 (lower is better)
Translates to: QYYTEKPSQPLYHRLRYLGAASQ*DGVTNL
Trigger: CAGATTGGTGACTCCGTCTCATTGACTTGCAGCACC...TAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR TCA 90 bp ATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTAGAGGGCCACTCAAATaGATCTCTGGATCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: IYRSRNSSSSLILMAVTVRGPLK*ISGSLG
Trigger: TCCTAAGGATCCAGAGATTCATTTGAGTGGCCCTCT...AACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
CDS-3UTR TCA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGAGAGGGCCACTCAAATaGATCTCTGGATCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQRGPLK*ISGSLG
Trigger: TCCTAAGGATCCAGAGATTCATTTGAGTGGCCCTCT...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
CDS-3UTR TCA 90 bp CATAGATGGGCATTTCTTTCCAAGTTCAATACATTCAGGGAAGTCTGCCTCTCAGTATACATCAGCAACTaGACACTTGACTGTGATCGG +
Preference number: 4 (lower is better)
Translates to: HRWAFLSKFNTFREVCLSVYISN*TLDCDR
Trigger: CCGATCACAGTCAAGTGTTCAGTTGCTGATGTATAC...TGAGAGGCAGACTTCCCTGAATGTATTGAACTTGGAAAGAAATGCCCATCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
CDS-3UTR TCA 90 bp TATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTACATGTCAACATGACTaGGTCTCCAATCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: YIQIKELLQFSHLDGSYCTCQHD*VSNLSS
Trigger: GCTGCTCAGATTGGAGACTCAGTCATGTTGACATGT...ACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294728.7
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGCTCTGGGGGCAACATTaGCATAAAGTGTTTGCGTAC +
Preference number: 4 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQLWGQH*HKVFAY
Trigger: GTACGCAAACACTTTATGTCAATGTTGCCCCCAGAG...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp TTAGTACCTGAAAGTCAACCCAGTGCTCCCTTTGCTTATTATTTGTCTATAAAAGGATGGAGGAAGGGCTaGCCAAGACGGTTGTATCTC +
Preference number: 4 (lower is better)
Translates to: LVPESQPSAPFAYYLSIKGWRKG*PRRLYL
Trigger: GAGATACAACCGTCTTGGTCAGCCCTTCCTCCATCC...TTTTATAGACAAATAATAAGCAAAGGGAGCACTGGGTTGACTTTCAGGTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR TCA 90 bp CATAGATGGGCATTTCTTTCCAAGTTCAATACATTCAGGGAAGTCTGCCTCTCACAGTGTCTCCTTCTTTaGCACTCTCAGAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: HRWAFLSKFNTFREVCLSQCLLL*HSQKEK
Trigger: CTTTTCCTTCTGAGAGTGTCAAAGAAGGAGACACTG...TGAGAGGCAGACTTCCCTGAATGTATTGAACTTGGAAAGAAATGCCCATCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGAGGTATTTAGTACCTaGAAGTCAACCCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTEVFST*KSTQCS
Trigger: GGAGCACTGGGTTGACTTTCAGGTACTAAATACCTC...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR TCA 90 bp TATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTGAGGTATTTAGTACCTaGAAGTCAACCCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: YIQIKELLQFSHLDGSYCEVFST*KSTQCS
Trigger: GGAGCACTGGGTTGACTTTCAGGTACTAAATACCTC...ACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp CAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAACTCACAGCCTGTGGTaGTGCAAGTCAATGAGACGG +
Preference number: 4 (lower is better)
Translates to: QYYTEKPSQPLYHRLRYLTHSLW*CKSMRR
Trigger: CCGTCTCATTGACTTGCAGCACCACAGGCTGTGAGT...TAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp ACATTGGGAAAGTTGCACAGGAGTCTGATGAACAAACTTCGTGAAACATCTCCGAATTCTTTTACAGCCTaGCTTACTGTGGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: TLGKLHRSLMNKLRETSPNSFTA*LTVGTE
Trigger: TTCTGTGCCCACAGTAAGGCAGGCTGTAAAAGAATT...CGGAGATGTTTCACGAAGTTTGTTCATCAGACTCCTGTGCAACTTTCCCAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp ATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTACAGAGCCACCTTCTTaGAGCTTTGTGGATGGATTC +
Preference number: 4 (lower is better)
Translates to: IYRSRNSSSSLILMAVTVTEPPS*SFVDGF
Trigger: GAATCCATCCACAAAGCTGCAAGAAGGTGGCTCTGT...AACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp ACATTGGGAAAGTTGCACAGGAGTCTGATGAACAAACTTCGTGAAACATCTCCGAGTGTTTGCGTACTCTaGCTTTGTTTGGGTTCGAAT +
Preference number: 4 (lower is better)
Translates to: TLGKLHRSLMNKLRETSPSVCVL*LCLGSN
Trigger: ATTCGAACCCAAACAAAGGCAGAGTACGCAAACACT...CGGAGATGTTTCACGAAGTTTGTTCATCAGACTCCTGTGCAACTTTCCCAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000650339.1
CDS-3UTR GCA 90 bp TATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTCATATTCACAGAACTaGCTTCCTCCAGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: YIQIKELLQFSHLDGSYCSYSQN*LPPGWR
Trigger: CCTCCATCCTGGAGGAAGGCAGTTCTGTGAATATGA...ACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp TTGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTCATATTCACAGAACTaGCTTCCTCCAGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: LYIQIKELLQFSHLDGSYSYSQN*LPPGWR
Trigger: CCTCCATCCTGGAGGAAGGCAGTTCTGTGAATATGA...GTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp CCTCTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCATCATATTCACAGAACTaGCTTCCTCCAGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: PLSSLFFSRNDEQYQGFASYSQN*LPPGWR
Trigger: CCTCCATCCTGGAGGAAGGCAGTTCTGTGAATATGA...TGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTTCATATTCACAGAACTaGCTTCCTCCAGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTSYSQN*LPPGWR
Trigger: CCTCCATCCTGGAGGAAGGCAGTTCTGTGAATATGA...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp GGCAGCAAGTTTTACTTTGACTTCTTGCTCACAGCAAGGGACATAGATGGGCATAACATCTCCGTACCATaGCAGTACTATACAGAGAAA +
Preference number: 4 (lower is better)
Translates to: GSKFYFDFLLTARDIDGHNISVP*QYYTEK
Trigger: TTTCTCTGTATAGTACTGGCATGGTACGGAGATGTT...ATGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTTCTCCAAGAGAAAAATaGGGACTCACAGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTSPREK*GLTACG
Trigger: ACCACAGGCTGTGAGTCCCCATTTTTCTCTTGGAGA...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp CCTCTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGCCTGCCTTACTGTaGGCACAGAATCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: PLSSLFFSRNDEQYQGFAQPALL*AQNPFH
Trigger: ATGAAATGGATTCTGTGCCCACAGTAAGGCAGGCTG...TGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp AGGATTTTCGGAGCAGGAAAGCCCTGGCTCAAGCATGTCATATTCACAGAACTGTTGCAGCTTTGTGGATaGATTCACAGAAATAACTGT +
Preference number: 4 (lower is better)
Translates to: RIFGAGKPWLKHVIFTELLQLCG*IHRNNC
Trigger: ACAGTTATTTCTGTGAATCCATCCACAAAGCTGCAA...CAGTTCTGTGAATATGACATGCTTGAGCCAGGGCTTTCCTGCTCCGAAAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR CCA 90 bp TATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTAGAGGGCTGTCTATCTaGGTTCTCCAGGAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: YIQIKELLQFSHLDGSYCRGLSI*VLQEKD
Trigger: ATCTTTCTCCTGGAGAACCCAGATAGACAGCCCTCT...ACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294728.7
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp ACATTGGGAAAGTTGCACAGGAGTCTGATGAACAAACTTCGTGAAACATCTCCGAGCAAGGGACATAGATaGGCATTTCTTTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: TLGKLHRSLMNKLRETSPSKGHR*AFLSKF
Trigger: GAACTTGGAAAGAAATGCCCATCTATGTCCCTTGCT...CGGAGATGTTTCACGAAGTTTGTTCATCAGACTCCTGTGCAACTTTCCCAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp CCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGAGCAAGGGACATAGATaGGCATTTCTTTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: PCQYYTEKPSQPLYHRLRSKGHR*AFLSKF
Trigger: GAACTTGGAAAGAAATGCCCATCTATGTCCCTTGCT...CCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR TCA 90 bp TATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTGTATACATCAGCAACTaGACACTTGACTGTGATCGG +
Preference number: 4 (lower is better)
Translates to: YIQIKELLQFSHLDGSYCVYISN*TLDCDR
Trigger: CCGATCACAGTCAAGTGTTCAGTTGCTGATGTATAC...ACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
CDS-3UTR TCA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTATACATCAGCAACTaGACACTTGACTGTGATCGG +
Preference number: 4 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTVYISN*TLDCDR
Trigger: CCGATCACAGTCAAGTGTTCAGTTGCTGATGTATAC...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
CDS-3UTR TCA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGCACTACATGTCAACATaGCTGAGTCTCCAATCTGAG +
Preference number: 4 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQHYMST*LSLQSE
Trigger: CTCAGATTGGAGACTCAGTCATGTTGACATGTAGTG...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294728.7
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp CAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTATGGATCTCTAGGGAATaGGTAGAGCTCCACCTGGAT +
Preference number: 4 (lower is better)
Translates to: QYYTEKPSQPLYHRLRYLWISRE*VELHLD
Trigger: ATCCAGGTGGAGCTCTACTCATTCCCTAGAGATCCA...TAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294728.7
ENST00000650339.1
CDS-3UTR TCA 90 bp CCTCTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGTGTCTCCTTCTTTaGCACTCTCAGAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PLSSLFFSRNDEQYQGFAQCLLL*HSQKEK
Trigger: CTTTTCCTTCTGAGAGTGTCAAAGAAGGAGACACTG...TGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp TATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTCCAGTTCTCTCATCTTaGTGGCAGTTACTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: YIQIKELLQFSHLDGSYCPVLSS*WQLLFF
Trigger: GAAGAACAGTAACTGCCATCAAGATGAGAGAACTGG...ACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTCCAGTTCTCTCATCTTaGTGGCAGTTACTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTPVLSS*WQLLFF
Trigger: GAAGAACAGTAACTGCCATCAAGATGAGAGAACTGG...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp CCTCTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCAGATGAACAAACTTCGTaGAACATCTCCGTACCATGC +
Preference number: 4 (lower is better)
Translates to: PLSSLFFSRNDEQYQGFADEQTS*NISVPC
Trigger: GCATGGTACGGAGATGTTTCACGAAGTTTGTTCATC...TGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR TCA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGATGAACAAACTTCGTaGAACATCTCCGTACCATGC +
Preference number: 4 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTDEQTS*NISVPC
Trigger: GCATGGTACGGAGATGTTTCACGAAGTTTGTTCATC...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR TCA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGGATGAACAAACTTCGTaGAACATCTCCGTACCATGC +
Preference number: 4 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQDEQTS*NISVPC
Trigger: GCATGGTACGGAGATGTTTCACGAAGTTTGTTCATC...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp GGCAGCAAGTTTTACTTTGACTTCTTGCTCACAGCAAGGGACATAGATGGGCATCCAGGCATTTTAAGTTaGTGTCGTGATGAGAAAATA +
Preference number: 4 (lower is better)
Translates to: GSKFYFDFLLTARDIDGHPGILS*CRDEKI
Trigger: TATTTTCTCATCACGACAGCAACTTAAAATGCCTGG...ATGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp ATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTCCTAGATTCACAAGTTaGTGTGCACAGGTAAGAGTG +
Preference number: 4 (lower is better)
Translates to: IYRSRNSSSSLILMAVTVPRFTS*CAQVRV
Trigger: CACTCTTACCTGTGCACAGCAACTTGTGAATCTAGG...AACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGCCTAGATTCACAAGTTaGTGTGCACAGGTAAGAGTG +
Preference number: 4 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQPRFTS*CAQVRV
Trigger: CACTCTTACCTGTGCACAGCAACTTGTGAATCTAGG...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp TATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTCCTAGATTCACAAGTTaGTGTGCACAGGTAAGAGTG +
Preference number: 4 (lower is better)
Translates to: YIQIKELLQFSHLDGSYCPRFTS*CAQVRV
Trigger: CACTCTTACCTGTGCACAGCAACTTGTGAATCTAGG...ACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp GAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAGTACCTGAAAGTACAGAGCCACCTTCTTaGAGCTTTGTGGATGGATTC +
Preference number: 4 (lower is better)
Translates to: EKPSQPLYHRLRYLVPESTEPPS*SFVDGF
Trigger: GAATCCATCCACAAAGCTGCAAGAAGGTGGCTCTGT...ACTTTCAGGTACTAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp GACATAAAGTGTTTGCGTACTCTGCCTTTGTTTGGGTTCGAATTCCATGTCATCTTACTTCCAAACTCTTaGTTTCCAGGGACTTCCTGT +
Preference number: 4 (lower is better)
Translates to: DIKCLRTLPLFGFEFHVILLPNS*FPGTSC
Trigger: ACAGGAAGTCCCTGGAAACCAAGAGTTTGGAAGTAA...GATGACATGGAATTCGAACCCAAACAAAGGCAGAGTACGCAAACACTTTATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR CCA 90 bp GAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAGTACCTGAAAGTCAGCCTGCCTTACTGTaGGCACAGAATCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: EKPSQPLYHRLRYLVPESQPALL*AQNPFH
Trigger: ATGAAATGGATTCTGTGCCCACAGTAAGGCAGGCTG...ACTTTCAGGTACTAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp GGCAGCAAGTTTTACTTTGACTTCTTGCTCACAGCAAGGGACATAGATGGGCATTTGCAGCTTTGTGGATaGATTCACAGAAATAACTGT +
Preference number: 4 (lower is better)
Translates to: GSKFYFDFLLTARDIDGHLQLCG*IHRNNC
Trigger: ACAGTTATTTCTGTGAATCCATCCACAAAGCTGCAA...ATGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATAGGAGCAGGAAAGCCCTaGCTCAAGCATGTCATATTC +
Preference number: 4 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQIGAGKP*LKHVIF
Trigger: GAATATGACATGCTTGAGCCAGGGCTTTCCTGCTCC...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp GGCAGCAAGTTTTACTTTGACTTCTTGCTCACAGCAAGGGACATAGATGGGCATATGACCCCTTCATGTTaGCTTTTCTTGCAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: GSKFYFDFLLTARDIDGHMTPSC*LFLQSK
Trigger: TTTACTTTGCAAGAAAAGCCAACATGAAGGGGTCAT...ATGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp CATAGATGGGCATTTCTTTCCAAGTTCAATACATTCAGGGAAGTCTGCCTCTCAATTTTTAGGCCACATTaGGAAAGTTGCACAGGAGTC +
Preference number: 4 (lower is better)
Translates to: HRWAFLSKFNTFREVCLSIFRPH*ESCTGV
Trigger: GACTCCTGTGCAACTTTCCCAATGTGGCCTAAAAAT...TGAGAGGCAGACTTCCCTGAATGTATTGAACTTGGAAAGAAATGCCCATCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR TCA 90 bp ATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTTATCCAAAGTATATTTaGGGCTCCAAGGATCACGAC +
Preference number: 4 (lower is better)
Translates to: IYRSRNSSSSLILMAVTVYPKYI*GSKDHD
Trigger: GTCGTGATCCTTGGAGCCTCAAATATACTTTGGATA...AACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp TTGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTATCCAAAGTATATTTaGGGCTCCAAGGATCACGAC +
Preference number: 4 (lower is better)
Translates to: LYIQIKELLQFSHLDGSYYPKYI*GSKDHD
Trigger: GTCGTGATCCTTGGAGCCTCAAATATACTTTGGATA...GTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp TATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTATCCAAAGTATATTTaGGGCTCCAAGGATCACGAC +
Preference number: 4 (lower is better)
Translates to: YIQIKELLQFSHLDGSYCYPKYI*GSKDHD
Trigger: GTCGTGATCCTTGGAGCCTCAAATATACTTTGGATA...ACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp CCTCTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCAACGGAGTCACCAATCTaGGCAAGATATCTAGATTCT +
Preference number: 4 (lower is better)
Translates to: PLSSLFFSRNDEQYQGFATESPI*ARYLDS
Trigger: AGAATCTAGATATCTTGCTCAGATTGGTGACTCCGT...TGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGACGGAGTCACCAATCTaGGCAAGATATCTAGATTCT +
Preference number: 4 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQTESPI*ARYLDS
Trigger: AGAATCTAGATATCTTGCTCAGATTGGTGACTCCGT...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp CCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGAACTGTATTCTTGGGTaGTATGTAGACTTGCAATTC +
Preference number: 4 (lower is better)
Translates to: PCQYYTEKPSQPLYHRLRNCILG*YVDLQF
Trigger: GAATTGCAAGTCTACATATCACCCAAGAATACAGTT...CCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR TCA 90 bp GTGCTTCTACAAGACTATATGACCCCTTCATGTTGGCTTTTCTTGCAAAGTAAACACTACATGTCAACATaGCTGAGTCTCCAATCTGAG +
Preference number: 4 (lower is better)
Translates to: VLLQDYMTPSCWLFLQSKHYMST*LSLQSE
Trigger: CTCAGATTGGAGACTCAGTCATGTTGACATGTAGTG...TTTACTTTGCAAGAAAAGCCAACATGAAGGGGTCATATAGTCTTGTAGAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR TCA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATACTCTGGGGGCAACATTaGCATAAAGTGTTTGCGTAC +
Preference number: 4 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQILWGQH*HKVFAY
Trigger: GTACGCAAACACTTTATGTCAATGTTGCCCCCAGAG...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp TCTCCGTACCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATATTCTACAAGACTATATaGCCCCTTCATGTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: SPYHASTIQRNPVNHYTIFYKTI*PLHVGF
Trigger: AAAGCCAACATGAAGGGGTCATATAGTCTTGTAGAA...TATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGGTACGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR TCA 90 bp ACATTGGGAAAGTTGCACAGGAGTCTGATGAACAAACTTCGTGAAACATCTCCGAATAGTGTCTCCAGTTaGACATATCAAGCATTAGCT +
Preference number: 4 (lower is better)
Translates to: TLGKLHRSLMNKLRETSPNSVSS*TYQALA
Trigger: AGCTAATGCTTGATATGTTCAACTGGAGACACTATT...CGGAGATGTTTCACGAAGTTTGTTCATCAGACTCCTGTGCAACTTTCCCAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR TCA 90 bp CAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAGAGGTATTTAGTACCTaGAAGTCAACCCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: QYYTEKPSQPLYHRLRYLEVFST*KSTQCS
Trigger: GGAGCACTGGGTTGACTTTCAGGTACTAAATACCTC...TAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR TCA 90 bp GAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAGTACCTGAAAGTGATGAACAAACTTCGTaGAACATCTCCGTACCATGC +
Preference number: 4 (lower is better)
Translates to: EKPSQPLYHRLRYLVPESDEQTS*NISVPC
Trigger: GCATGGTACGGAGATGTTTCACGAAGTTTGTTCATC...ACTTTCAGGTACTAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp TTGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACAATTCTTTTACAGCCTaGCTTACTGTGGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: LYIQIKELLQFSHLDGSYNSFTA*LTVGTE
Trigger: TTCTGTGCCCACAGTAAGGCAGGCTGTAAAAGAATT...GTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp TATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTAATTCTTTTACAGCCTaGCTTACTGTGGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: YIQIKELLQFSHLDGSYCNSFTA*LTVGTE
Trigger: TTCTGTGCCCACAGTAAGGCAGGCTGTAAAAGAATT...ACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATAACAGAGCCACCTTCTTaGAGCTTTGTGGATGGATTC +
Preference number: 4 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQITEPPS*SFVDGF
Trigger: GAATCCATCCACAAAGCTGCAAGAAGGTGGCTCTGT...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp CATAGATGGGCATTTCTTTCCAAGTTCAATACATTCAGGGAAGTCTGCCTCTCAGCATTTCCAGAAAGGTaGTGTAGATTCCCATTATCT +
Preference number: 4 (lower is better)
Translates to: HRWAFLSKFNTFREVCLSAFPER*CRFPLS
Trigger: AGATAATGGGAATCTACAGCACCTTTCTGGAAATGC...TGAGAGGCAGACTTCCCTGAATGTATTGAACTTGGAAAGAAATGCCCATCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp TTCCAATGGCAGGTATTATTAAGGAGGATGCAAAATAGAGCACGAGAAGCTCAGGCATTTCCAGAAAGGTaGTGTAGATTCCCATTATCT +
Preference number: 4 (lower is better)
Translates to: FQWQVLLRRMQNRAREAQAFPER*CRFPLS
Trigger: AGATAATGGGAATCTACAGCACCTTTCTGGAAATGC...CTGAGCTTCTCGTGCTCTATTTTGCATCCTCCTTAATAATACCTGCCATTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR CCA 90 bp CAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTATCTCCAAGAGAAAAATaGGGACTCACAGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: QYYTEKPSQPLYHRLRYLSPREK*GLTACG
Trigger: ACCACAGGCTGTGAGTCCCCATTTTTCTCTTGGAGA...TAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTTTACTTCCAAACTCTTaGTTTCCAGGGACTTCCTGT +
Preference number: 4 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTLLPNS*FPGTSC
Trigger: ACAGGAAGTCCCTGGAAACCAAGAGTTTGGAAGTAA...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATACAGCCTGCCTTACTGTaGGCACAGAATCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQIQPALL*AQNPFH
Trigger: ATGAAATGGATTCTGTGCCCACAGTAAGGCAGGCTG...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp ACATTGGGAAAGTTGCACAGGAGTCTGATGAACAAACTTCGTGAAACATCTCCGTTGCAGCTTTGTGGATaGATTCACAGAAATAACTGT +
Preference number: 4 (lower is better)
Translates to: TLGKLHRSLMNKLRETSPLQLCG*IHRNNC
Trigger: ACAGTTATTTCTGTGAATCCATCCACAAAGCTGCAA...CGGAGATGTTTCACGAAGTTTGTTCATCAGACTCCTGTGCAACTTTCCCAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp TTGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACAGCAAGGGACATAGATaGGCATTTCTTTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: LYIQIKELLQFSHLDGSYSKGHR*AFLSKF
Trigger: GAACTTGGAAAGAAATGCCCATCTATGTCCCTTGCT...GTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp CCTCTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCAAGCAAGGGACATAGATaGGCATTTCTTTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: PLSSLFFSRNDEQYQGFASKGHR*AFLSKF
Trigger: GAACTTGGAAAGAAATGCCCATCTATGTCCCTTGCT...TGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTATTTTTAGGCCACATTaGGAAAGTTGCACAGGAGTC +
Preference number: 4 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTIFRPH*ESCTGV
Trigger: GACTCCTGTGCAACTTTCCCAATGTGGCCTAAAAAT...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp ATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTACTCATCTCGATTTCTaGATCTCTAGGGAATGCTTG +
Preference number: 4 (lower is better)
Translates to: IYRSRNSSSSLILMAVTVTHLDF*ISRECL
Trigger: CAAGCATTCCCTAGAGATCCAGAAATCGAGATGAGT...AACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347652.6
CDS-3UTR CCA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGAGACGGTTGTATCTCTaGGGGCAACTTGAACAATTA +
Preference number: 4 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQRRLYL*GQLEQL
Trigger: TAATTGTTCAAGTTGCCCCCAGAGATACAACCGTCT...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370115.1
CDS-3UTR TCA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATAGTATACATCAGCAACTaGACACTTGACTGTGATCGG +
Preference number: 4 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQIVYISN*TLDCDR
Trigger: CCGATCACAGTCAAGTGTTCAGTTGCTGATGTATAC...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
CDS-3UTR TCA 90 bp TCTCCGTACCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAAACTGTATTCTTGGGTaGTATGTAGACTTGCAATTC +
Preference number: 4 (lower is better)
Translates to: SPYHASTIQRNPVNHYTINCILG*YVDLQF
Trigger: GAATTGCAAGTCTACATATCACCCAAGAATACAGTT...TATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGGTACGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR TCA 90 bp CATAGATGGGCATTTCTTTCCAAGTTCAATACATTCAGGGAAGTCTGCCTCTCAAACTGTATTCTTGGGTaGTATGTAGACTTGCAATTC +
Preference number: 4 (lower is better)
Translates to: HRWAFLSKFNTFREVCLSNCILG*YVDLQF
Trigger: GAATTGCAAGTCTACATATCACCCAAGAATACAGTT...TGAGAGGCAGACTTCCCTGAATGTATTGAACTTGGAAAGAAATGCCCATCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp CATAGATGGGCATTTCTTTCCAAGTTCAATACATTCAGGGAAGTCTGCCTCTCAATATGTAACTTAGCCTaGCAAACAAGAGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: HRWAFLSKFNTFREVCLSICNLA*QTRAFP
Trigger: TGGAAAAGCTCTTGTTTGTCAGGCTAAGTTACATAT...TGAGAGGCAGACTTCCCTGAATGTATTGAACTTGGAAAGAAATGCCCATCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp CAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTACAGTGTCTCCTTCTTTaGCACTCTCAGAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: QYYTEKPSQPLYHRLRYLQCLLL*HSQKEK
Trigger: CTTTTCCTTCTGAGAGTGTCAAAGAAGGAGACACTG...TAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR TCA 90 bp CCTCTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCATTCTACAAGACTATATaGCCCCTTCATGTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: PLSSLFFSRNDEQYQGFAFYKTI*PLHVGF
Trigger: AAAGCCAACATGAAGGGGTCATATAGTCTTGTAGAA...TGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp ATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTTTCTACAAGACTATATaGCCCCTTCATGTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: IYRSRNSSSSLILMAVTVFYKTI*PLHVGF
Trigger: AAAGCCAACATGAAGGGGTCATATAGTCTTGTAGAA...AACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp CATAGATGGGCATTTCTTTCCAAGTTCAATACATTCAGGGAAGTCTGCCTCTCAAATAGTGTCTCCAGTTaGACATATCAAGCATTAGCT +
Preference number: 4 (lower is better)
Translates to: HRWAFLSKFNTFREVCLSNSVSS*TYQALA
Trigger: AGCTAATGCTTGATATGTTCAACTGGAGACACTATT...TGAGAGGCAGACTTCCCTGAATGTATTGAACTTGGAAAGAAATGCCCATCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATACCAGTTCTCTCATCTTaGTGGCAGTTACTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQIPVLSS*WQLLFF
Trigger: GAAGAACAGTAACTGCCATCAAGATGAGAGAACTGG...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp TCTCCGTACCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATACCAGGCATTTTAAGTTaGTGTCGTGATGAGAAAATA +
Preference number: 4 (lower is better)
Translates to: SPYHASTIQRNPVNHYTIPGILS*CRDEKI
Trigger: TATTTTCTCATCACGACAGCAACTTAAAATGCCTGG...TATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGGTACGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp GAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAGTACCTGAAAGTACATTCAGGGAAGTCTaGCTCTCAGCTCATTGTTTT +
Preference number: 4 (lower is better)
Translates to: EKPSQPLYHRLRYLVPESTFREV*LSAHCF
Trigger: AAAACAATGAGCTGAGAGGCAGACTTCCCTGAATGT...ACTTTCAGGTACTAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp ATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTAACATCTCCGTACCATaGCAGTACTATACAGAGAAA +
Preference number: 4 (lower is better)
Translates to: IYRSRNSSSSLILMAVTVNISVP*QYYTEK
Trigger: TTTCTCTGTATAGTACTGGCATGGTACGGAGATGTT...AACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
3UTR CAA 72 bp TATACAGAGAAACCCAGTCAACCATTATACCATAGGTaGAGGTATTTAGTACCTGAAAGTCAACCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: YTEKPSQPLYHR*RYLVPESQPSA
Trigger: AGCACTGGGTTGACTTTCAGGTACTAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR TCA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATATATCCAAAGTATATTTaGGGCTCCAAGGATCACGAC +
Preference number: 4 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQIYPKYI*GSKDHD
Trigger: GTCGTGATCCTTGGAGCCTCAAATATACTTTGGATA...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTAACTGTATTCTTGGGTaGTATGTAGACTTGCAATTC +
Preference number: 4 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTNCILG*YVDLQF
Trigger: GAATTGCAAGTCTACATATCACCCAAGAATACAGTT...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp CCTCTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCAATATGTAACTTAGCCTaGCAAACAAGAGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: PLSSLFFSRNDEQYQGFAICNLA*QTRAFP
Trigger: TGGAAAAGCTCTTGTTTGTCAGGCTAAGTTACATAT...TGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATATGTAACTTAGCCTaGCAAACAAGAGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQICNLA*QTRAFP
Trigger: TGGAAAAGCTCTTGTTTGTCAGGCTAAGTTACATAT...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp CCTCTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCAAATAGTGTCTCCAGTTaGACATATCAAGCATTAGCT +
Preference number: 4 (lower is better)
Translates to: PLSSLFFSRNDEQYQGFANSVSS*TYQALA
Trigger: AGCTAATGCTTGATATGTTCAACTGGAGACACTATT...TGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp TTGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACCCAGGCATTTTAAGTTaGTGTCGTGATGAGAAAATA +
Preference number: 4 (lower is better)
Translates to: LYIQIKELLQFSHLDGSYPGILS*CRDEKI
Trigger: TATTTTCTCATCACGACAGCAACTTAAAATGCCTGG...GTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp TATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTCCAGGCATTTTAAGTTaGTGTCGTGATGAGAAAATA +
Preference number: 4 (lower is better)
Translates to: YIQIKELLQFSHLDGSYCPGILS*CRDEKI
Trigger: TATTTTCTCATCACGACAGCAACTTAAAATGCCTGG...ACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATAAGTGTTTGCGTACTCTaGCTTTGTTTGGGTTCGAAT +
Preference number: 4 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQISVCVL*LCLGSN
Trigger: ATTCGAACCCAAACAAAGGCAGAGTACGCAAACACT...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp CAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAAGTGTTTGCGTACTCTaGCTTTGTTTGGGTTCGAAT +
Preference number: 4 (lower is better)
Translates to: QYYTEKPSQPLYHRLRYLSVCVL*LCLGSN
Trigger: ATTCGAACCCAAACAAAGGCAGAGTACGCAAACACT...TAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000650339.1
CDS-3UTR CCA 90 bp CATAGATGGGCATTTCTTTCCAAGTTCAATACATTCAGGGAAGTCTGCCTCTCAAAGATATCTAGATTCTaGGGTGGTCTCGATTTTAAA +
Preference number: 4 (lower is better)
Translates to: HRWAFLSKFNTFREVCLSKISRF*GGLDFK
Trigger: TTTAAAATCGAGACCACCCCAGAATCTAGATATCTT...TGAGAGGCAGACTTCCCTGAATGTATTGAACTTGGAAAGAAATGCCCATCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp CAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTATTACTTCCAAACTCTTaGTTTCCAGGGACTTCCTGT +
Preference number: 4 (lower is better)
Translates to: QYYTEKPSQPLYHRLRYLLLPNS*FPGTSC
Trigger: ACAGGAAGTCCCTGGAAACCAAGAGTTTGGAAGTAA...TAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp TTGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACATGACCCCTTCATGTTaGCTTTTCTTGCAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: LYIQIKELLQFSHLDGSYMTPSC*LFLQSK
Trigger: TTTACTTTGCAAGAAAAGCCAACATGAAGGGGTCAT...GTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR TCA 90 bp TTAGTACCTGAAAGTCAACCCAGTGCTCCCTTTGCTTATTATTTGTCTATAAAAACGGAGTCACCAATCTaGGCAAGATATCTAGATTCT +
Preference number: 4 (lower is better)
Translates to: LVPESQPSAPFAYYLSIKTESPI*ARYLDS
Trigger: AGAATCTAGATATCTTGCTCAGATTGGTGACTCCGT...TTTTATAGACAAATAATAAGCAAAGGGAGCACTGGGTTGACTTTCAGGTACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR TCA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATATTCTACAAGACTATATaGCCCCTTCATGTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQIFYKTI*PLHVGF
Trigger: AAAGCCAACATGAAGGGGTCATATAGTCTTGTAGAA...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATAGCATTTCCAGAAAGGTaGTGTAGATTCCCATTATCT +
Preference number: 4 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQIAFPER*CRFPLS
Trigger: AGATAATGGGAATCTACAGCACCTTTCTGGAAATGC...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp TTAGTACCTGAAAGTCAACCCAGTGCTCCCTTTGCTTATTATTTGTCTATAAAAACATTCAGGGAAGTCTaGCTCTCAGCTCATTGTTTT +
Preference number: 4 (lower is better)
Translates to: LVPESQPSAPFAYYLSIKTFREV*LSAHCF
Trigger: AAAACAATGAGCTGAGAGGCAGACTTCCCTGAATGT...TTTTATAGACAAATAATAAGCAAAGGGAGCACTGGGTTGACTTTCAGGTACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp TTGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACACCCAGTGCTCCCTTTaGTTATTATTTGTCTATAAA +
Preference number: 4 (lower is better)
Translates to: LYIQIKELLQFSHLDGSYTQCSL*LLFVYK
Trigger: TTTATAGACAAATAATAAGCAAAGGGAGCACTGGGT...GTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp CAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAAACATCTCCGTACCATaGCAGTACTATACAGAGAAA +
Preference number: 4 (lower is better)
Translates to: QYYTEKPSQPLYHRLRYLNISVP*QYYTEK
Trigger: TTTCTCTGTATAGTACTGGCATGGTACGGAGATGTT...TAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp TATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTAAGATATCTAGATTCTaGGGTGGTCTCGATTTTAAA +
Preference number: 4 (lower is better)
Translates to: YIQIKELLQFSHLDGSYCKISRF*GGLDFK
Trigger: TTTAAAATCGAGACCACCCCAGAATCTAGATATCTT...ACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp GAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAGTACCTGAAAGTTTGCAGCTTTGTGGATaGATTCACAGAAATAACTGT +
Preference number: 4 (lower is better)
Translates to: EKPSQPLYHRLRYLVPESLQLCG*IHRNNC
Trigger: ACAGTTATTTCTGTGAATCCATCCACAAAGCTGCAA...ACTTTCAGGTACTAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR TCA 90 bp CAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAAATAGTGTCTCCAGTTaGACATATCAAGCATTAGCT +
Preference number: 4 (lower is better)
Translates to: QYYTEKPSQPLYHRLRYLNSVSS*TYQALA
Trigger: AGCTAATGCTTGATATGTTCAACTGGAGACACTATT...TAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp TTAGTACCTGAAAGTCAACCCAGTGCTCCCTTTGCTTATTATTTGTCTATAAAAGCATTTCCAGAAAGGTaGTGTAGATTCCCATTATCT +
Preference number: 4 (lower is better)
Translates to: LVPESQPSAPFAYYLSIKAFPER*CRFPLS
Trigger: AGATAATGGGAATCTACAGCACCTTTCTGGAAATGC...TTTTATAGACAAATAATAAGCAAAGGGAGCACTGGGTTGACTTTCAGGTACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATAATGACCCCTTCATGTTaGCTTTTCTTGCAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQIMTPSC*LFLQSK
Trigger: TTTACTTTGCAAGAAAAGCCAACATGAAGGGGTCAT...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR GCA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATAACCCAGTGCTCCCTTTaGTTATTATTTGTCTATAAA +
Preference number: 4 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQITQCSL*LLFVYK
Trigger: TTTATAGACAAATAATAAGCAAAGGGAGCACTGGGT...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CCA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATAAAGATATCTAGATTCTaGGGTGGTCTCGATTTTAAA +
Preference number: 4 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQIKISRF*GGLDFK
Trigger: TTTAAAATCGAGACCACCCCAGAATCTAGATATCTT...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CCA 90 bp TTAGTACCTGAAAGTCAACCCAGTGCTCCCTTTGCTTATTATTTGTCTATAAAATTGCAGCTTTGTGGATaGATTCACAGAAATAACTGT +
Preference number: 4 (lower is better)
Translates to: LVPESQPSAPFAYYLSIKLQLCG*IHRNNC
Trigger: ACAGTTATTTCTGTGAATCCATCCACAAAGCTGCAA...TTTTATAGACAAATAATAAGCAAAGGGAGCACTGGGTTGACTTTCAGGTACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR GCA 90 bp TTAGTACCTGAAAGTCAACCCAGTGCTCCCTTTGCTTATTATTTGTCTATAAAAACCCAGTGCTCCCTTTaGTTATTATTTGTCTATAAA +
Preference number: 4 (lower is better)
Translates to: LVPESQPSAPFAYYLSIKTQCSL*LLFVYK
Trigger: TTTATAGACAAATAATAAGCAAAGGGAGCACTGGGT...TTTTATAGACAAATAATAAGCAAAGGGAGCACTGGGTTGACTTTCAGGTACTAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CAA 90 bp GCATTCTCAGAAAGAGGCTGTAGCTCCCCGTTAGGGAGCTGCCTGCTCCACAGGCACAGAGCCACCTTCTaGCAGCTTTGTGGATGGATT +
Preference number: 5 (lower is better)
Translates to: AFSERGCSSPLGSCLLHRHRATF*QLCGWI
Trigger: AATCCATCCACAAAGCTGCAAGAAGGTGGCTCTGTG...CCTGTGGAGCAGGCAGCTCCCTAACGGGGAGCTACAGCCTCTTTCTGAGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR CAA 90 bp CACATTCATATACTCCCGCATCCTTCAACTGGGCCTTTCGGATGGTATAGGCGCAGGGTCAGCGTGGAATaGGTCCCCTCACTCCTCACC +
Preference number: 5 (lower is better)
Translates to: HIHILPHPSTGPFGWYRRRVSVE*VPSLLT
Trigger: GGTGAGGAGTGAGGGGACCAATTCCACGCTGACCCT...GCGCCTATACCATCCGAAAGGCCCAGTTGAAGGATGCGGGAGTATATGAATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS TCA 90 bp CACTTGACTGTGATCGGCTTCCCAGCCTCCAGAGGGCCACTCAAATaGATCTCTGGATCCTTAGGAAAAGAGCCTGTGGTGCTGCAAGTC +
Preference number: 5 (lower is better)
Translates to: HLTVIGFPASRGPLK*ISGSLGKEPVVLQV
Trigger: GACTTGCAGCACCACAGGCTCTTTTCCTAAGGATCCAGAGATTCATTTGAGTGGCCCTCTGGAGGCTGGGAAGCCGATCACAGTCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370119.8
CDS CCA 90 bp AATAGTGGTTCCAAAACCCTTATTTGTGTCCCACCTGTGTGTGCCTaGGAGGGTATTCAGCTCCTGAAGCCAGTGAGGCCCGATGCAGAT +
Preference number: 5 (lower is better)
Translates to: NSGSKTLICVPPVCA*EGIQLLKPVRPDAD
Trigger: ATCTGCATCGGGCCTCACTGGCTTCAGGAGCTGAATACCCTCCCAGGCACACACAGGTGGGACACAAATAAGGGTTTTGGAACCACTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294728.7
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp GGCAGCAAGTTTTACTTTGACTTCTTGCTCACAGCAAGGGACATAGATGGGCATAGGGTCAGCGTGGAATaGGTCCCCTCACTCCTCACC +
Preference number: 5 (lower is better)
Translates to: GSKFYFDFLLTARDIDGHRVSVE*VPSLLT
Trigger: GGTGAGGAGTGAGGGGACCAATTCCACGCTGACCCT...ATGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294728.7
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp TGTAGCTCCCCGTTAGGGAGCTGCCTGCTCCACAGGATTTTCGGAGCAGGAAAGCTGCCTCTCAGCTCATaGTTTTTCTCAAGGAATGAT +
Preference number: 5 (lower is better)
Translates to: CSSPLGSCLLHRIFGAGKLPLSS*FFSRND
Trigger: ATCATTCCTTGAGAAAAACAATGAGCTGAGAGGCAG...CTTTCCTGCTCCGAAAATCCTGTGGAGCAGGCAGCTCCCTAACGGGGAGCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS TCA 90 bp ACCTACTGTGCATTCACAAGAGGGCTTAGGAGATTAAGGGGCCCCTaGAGTTTCTCCAATGAGGATACTGCTCCTCTCTTTCTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: TYCAFTRGLRRLRGP*SFSNEDTAPLFLCP
Trigger: TGGACAGAGAAAGAGAGGAGCAGTATCCTCATTGGAGAAACTTCAGGGGCCCCTTAATCTCCTAAGCCCTCTTGTGAATGCACAGTAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603679.1
CDS-3UTR CAA 90 bp TATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTAGGGTCAGCGTGGAATaGGTCCCCTCACTCCTCACC +
Preference number: 5 (lower is better)
Translates to: YIQIKELLQFSHLDGSYCRVSVE*VPSLLT
Trigger: GGTGAGGAGTGAGGGGACCAATTCCACGCTGACCCT...ACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294728.7
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp GGCAGCAAGTTTTACTTTGACTTCTTGCTCACAGCAAGGGACATAGATGGGCATTCAGCAACTGAACACTaGACTGTGATCGGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: GSKFYFDFLLTARDIDGHSATEH*TVIGFP
Trigger: TGGGAAGCCGATCACAGTCAAGTGTTCAGTTGCTGA...ATGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
CDS-3UTR CAA 90 bp GGCAGCAAGTTTTACTTTGACTTCTTGCTCACAGCAAGGGACATAGATGGGCATGCCACATTGGGAAAGTaGCACAGGAGTCTGATGAAC +
Preference number: 5 (lower is better)
Translates to: GSKFYFDFLLTARDIDGHATLGK*HRSLMN
Trigger: GTTCATCAGACTCCTGTGCAACTTTCCCAATGTGGC...ATGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS TCA 90 bp CCAGGGACTTCCTGTCTGCATCCTCCAGAAATTCCTGACTCTTCATaGGATGATCTCCTTTCAGTAAGTCTATCTCCAGCCTGTCAAATG +
Preference number: 5 (lower is better)
Translates to: PGTSCLHPPEIPDSS*DDLLSVSLSPACQM
Trigger: CATTTGACAGGCTGGAGATAGACTTACTGAAAGGAGATCATCTCATGAAGAGTCAGGAATTTCTGGAGGATGCAGACAGGAAGTCCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
CDS TCA 90 bp CCAGGGACTTCCTGTCTGCATCCTCCAGAAATTCCTGACTCTTCATaGGATGATCTCCTTTCAGTAAGTCTATCTCCAGCAGTAGATCTC +
Preference number: 5 (lower is better)
Translates to: PGTSCLHPPEIPDSS*DDLLSVSLSPAVDL
Trigger: GAGATCTACTGCTGGAGATAGACTTACTGAAAGGAGATCATCTCATGAAGAGTCAGGAATTTCTGGAGGATGCAGACAGGAAGTCCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR CAA 90 bp GGCAGCAAGTTTTACTTTGACTTCTTGCTCACAGCAAGGGACATAGATGGGCATTTCCAAAACCCTTATTaGTGTCCCACCTGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: GSKFYFDFLLTARDIDGHFQNPY*CPTCVC
Trigger: GCACACACAGGTGGGACACAAATAAGGGTTTTGGAA...ATGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp GGCAGCAAGTTTTACTTTGACTTCTTGCTCACAGCAAGGGACATAGATGGGCATGTTACTTCCAAACTCTaGGTTTCCAGGGACTTCCTG +
Preference number: 5 (lower is better)
Translates to: GSKFYFDFLLTARDIDGHVTSKL*VSRDFL
Trigger: CAGGAAGTCCCTGGAAACCAAGAGTTTGGAAGTAAC...ATGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp ACATTGGGAAAGTTGCACAGGAGTCTGATGAACAAACTTCGTGAAACATCTCCGGCCACATTGGGAAAGTaGCACAGGAGTCTGATGAAC +
Preference number: 5 (lower is better)
Translates to: TLGKLHRSLMNKLRETSPATLGK*HRSLMN
Trigger: GTTCATCAGACTCCTGTGCAACTTTCCCAATGTGGC...CGGAGATGTTTCACGAAGTTTGTTCATCAGACTCCTGTGCAACTTTCCCAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CAA 90 bp CCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGGCCACATTGGGAAAGTaGCACAGGAGTCTGATGAAC +
Preference number: 5 (lower is better)
Translates to: PCQYYTEKPSQPLYHRLRATLGK*HRSLMN
Trigger: GTTCATCAGACTCCTGTGCAACTTTCCCAATGTGGC...CCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CAA 90 bp ACATTGGGAAAGTTGCACAGGAGTCTGATGAACAAACTTCGTGAAACATCTCCGTTCCAAAACCCTTATTaGTGTCCCACCTGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: TLGKLHRSLMNKLRETSPFQNPY*CPTCVC
Trigger: GCACACACAGGTGGGACACAAATAAGGGTTTTGGAA...CGGAGATGTTTCACGAAGTTTGTTCATCAGACTCCTGTGCAACTTTCCCAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CAA 90 bp CCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTTCCAAAACCCTTATTaGTGTCCCACCTGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: PCQYYTEKPSQPLYHRLRFQNPY*CPTCVC
Trigger: GCACACACAGGTGGGACACAAATAAGGGTTTTGGAA...CCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CAA 90 bp GGCAGCAAGTTTTACTTTGACTTCTTGCTCACAGCAAGGGACATAGATGGGCATGTACTCTGCCTTTGTTaGGGTTCGAATTCCATGTCA +
Preference number: 5 (lower is better)
Translates to: GSKFYFDFLLTARDIDGHVLCLC*GSNSMS
Trigger: TGACATGGAATTCGAACCCAAACAAAGGCAGAGTAC...ATGCCCATCTATGTCCCTTGCTGTGAGCAAGAAGTCAAAGTAAAACTTGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS TCA 90 bp GCAGCTAATTGGTGTGCAAGGGGTGTGATACTGATCAGCCAAGGCTaGTGTATTTTGTTTACACCAATAAGATCAGCAGATCCTACCTAC +
Preference number: 5 (lower is better)
Translates to: AANWCARGVILISQG*CILFTPIRSADPTY
Trigger: GTAGGTAGGATCTGCTGATCTTATTGGTGTAAACAAAATACATCAGCCTTGGCTGATCAGTATCACACCCCTTGCACACCAATTAGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603679.1
CDS-3UTR CAA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGTCAGCAACTGAACACTaGACTGTGATCGGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQSATEH*TVIGFP
Trigger: TGGGAAGCCGATCACAGTCAAGTGTTCAGTTGCTGA...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
CDS-3UTR CAA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTTCAGCAACTGAACACTaGACTGTGATCGGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTSATEH*TVIGFP
Trigger: TGGGAAGCCGATCACAGTCAAGTGTTCAGTTGCTGA...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
CDS-3UTR CAA 90 bp TATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTCAGCAACTGAACACTaGACTGTGATCGGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: YIQIKELLQFSHLDGSYCSATEH*TVIGFP
Trigger: TGGGAAGCCGATCACAGTCAAGTGTTCAGTTGCTGA...ACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
CDS-3UTR CAA 90 bp ATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTCACAGAGCCACCTTCTaGCAGCTTTGTGGATGGATT +
Preference number: 5 (lower is better)
Translates to: IYRSRNSSSSLILMAVTVHRATF*QLCGWI
Trigger: AATCCATCCACAAAGCTGCAAGAAGGTGGCTCTGTG...AACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTCACAGAGCCACCTTCTaGCAGCTTTGTGGATGGATT +
Preference number: 5 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTHRATF*QLCGWI
Trigger: AATCCATCCACAAAGCTGCAAGAAGGTGGCTCTGTG...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTTACACGCTAGGAACCTaGCAGCTTACAGTGACAGAG +
Preference number: 5 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTYTLGT*QLTVTE
Trigger: CTCTGTCACTGTAAGCTGCAAGGTTCCTAGCGTGTA...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp ATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTTACACGCTAGGAACCTaGCAGCTTACAGTGACAGAG +
Preference number: 5 (lower is better)
Translates to: IYRSRNSSSSLILMAVTVYTLGT*QLTVTE
Trigger: CTCTGTCACTGTAAGCTGCAAGGTTCCTAGCGTGTA...AACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp CCTCTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCAGCCACATTGGGAAAGTaGCACAGGAGTCTGATGAAC +
Preference number: 5 (lower is better)
Translates to: PLSSLFFSRNDEQYQGFAATLGK*HRSLMN
Trigger: GTTCATCAGACTCCTGTGCAACTTTCCCAATGTGGC...TGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CAA 90 bp TATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTTCCAAAACCCTTATTaGTGTCCCACCTGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: YIQIKELLQFSHLDGSYCFQNPY*CPTCVC
Trigger: GCACACACAGGTGGGACACAAATAAGGGTTTTGGAA...ACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp ATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTGTTACTTCCAAACTCTaGGTTTCCAGGGACTTCCTG +
Preference number: 5 (lower is better)
Translates to: IYRSRNSSSSLILMAVTVVTSKL*VSRDFL
Trigger: CAGGAAGTCCCTGGAAACCAAGAGTTTGGAAGTAAC...AACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp TATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTGTTACTTCCAAACTCTaGGTTTCCAGGGACTTCCTG +
Preference number: 5 (lower is better)
Translates to: YIQIKELLQFSHLDGSYCVTSKL*VSRDFL
Trigger: CAGGAAGTCCCTGGAAACCAAGAGTTTGGAAGTAAC...ACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGGTTACTTCCAAACTCTaGGTTTCCAGGGACTTCCTG +
Preference number: 5 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQVTSKL*VSRDFL
Trigger: CAGGAAGTCCCTGGAAACCAAGAGTTTGGAAGTAAC...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp TCTCCGTACCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATACACCTTCTTGCAGCTTaGTGGATGGATTCACAGAAA +
Preference number: 5 (lower is better)
Translates to: SPYHASTIQRNPVNHYTIHLLAA*WMDSQK
Trigger: TTTCTGTGAATCCATCCACAAAGCTGCAAGAAGGTG...TATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGGTACGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CAA 90 bp CATAGATGGGCATTTCTTTCCAAGTTCAATACATTCAGGGAAGTCTGCCTCTCACACCTTCTTGCAGCTTaGTGGATGGATTCACAGAAA +
Preference number: 5 (lower is better)
Translates to: HRWAFLSKFNTFREVCLSHLLAA*WMDSQK
Trigger: TTTCTGTGAATCCATCCACAAAGCTGCAAGAAGGTG...TGAGAGGCAGACTTCCCTGAATGTATTGAACTTGGAAAGAAATGCCCATCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp GAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAGTACCTGAAAGTTACACGCTAGGAACCTaGCAGCTTACAGTGACAGAG +
Preference number: 5 (lower is better)
Translates to: EKPSQPLYHRLRYLVPESYTLGT*QLTVTE
Trigger: CTCTGTCACTGTAAGCTGCAAGGTTCCTAGCGTGTA...ACTTTCAGGTACTAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000650339.1
CDS-3UTR CAA 90 bp GTGCTTCTACAAGACTATATGACCCCTTCATGTTGGCTTTTCTTGCAAAGTAAATACACGCTAGGAACCTaGCAGCTTACAGTGACAGAG +
Preference number: 5 (lower is better)
Translates to: VLLQDYMTPSCWLFLQSKYTLGT*QLTVTE
Trigger: CTCTGTCACTGTAAGCTGCAAGGTTCCTAGCGTGTA...TTTACTTTGCAAGAAAAGCCAACATGAAGGGGTCATATAGTCTTGTAGAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR CAA 90 bp CATAGATGGGCATTTCTTTCCAAGTTCAATACATTCAGGGAAGTCTGCCTCTCAGTACTCTGCCTTTGTTaGGGTTCGAATTCCATGTCA +
Preference number: 5 (lower is better)
Translates to: HRWAFLSKFNTFREVCLSVLCLC*GSNSMS
Trigger: TGACATGGAATTCGAACCCAAACAAAGGCAGAGTAC...TGAGAGGCAGACTTCCCTGAATGTATTGAACTTGGAAAGAAATGCCCATCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp CATAGATGGGCATTTCTTTCCAAGTTCAATACATTCAGGGAAGTCTGCCTCTCATTGCGTACTCTGCCTTaGTTTGGGTTCGAATTCCAT +
Preference number: 5 (lower is better)
Translates to: HRWAFLSKFNTFREVCLSLRTLP*FGFEFH
Trigger: ATGGAATTCGAACCCAAACAAAGGCAGAGTACGCAA...TGAGAGGCAGACTTCCCTGAATGTATTGAACTTGGAAAGAAATGCCCATCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp TTCCAATGGCAGGTATTATTAAGGAGGATGCAAAATAGAGCACGAGAAGCTCAGTTGCGTACTCTGCCTTaGTTTGGGTTCGAATTCCAT +
Preference number: 5 (lower is better)
Translates to: FQWQVLLRRMQNRAREAQLRTLP*FGFEFH
Trigger: ATGGAATTCGAACCCAAACAAAGGCAGAGTACGCAA...CTGAGCTTCTCGTGCTCTATTTTGCATCCTCCTTAATAATACCTGCCATTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR CAA 90 bp CCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGACAGTGTCTCCTTCTTaGACACTCTCAGAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: PCQYYTEKPSQPLYHRLRTVSPS*TLSEGK
Trigger: TTTTCCTTCTGAGAGTGTCAAAGAAGGAGACACTGT...CCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CAA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATACACAGAGCCACCTTCTaGCAGCTTTGTGGATGGATT +
Preference number: 5 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQIHRATF*QLCGWI
Trigger: AATCCATCCACAAAGCTGCAAGAAGGTGGCTCTGTG...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp TATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTGTACTCTGCCTTTGTTaGGGTTCGAATTCCATGTCA +
Preference number: 5 (lower is better)
Translates to: YIQIKELLQFSHLDGSYCVLCLC*GSNSMS
Trigger: TGACATGGAATTCGAACCCAAACAAAGGCAGAGTAC...ACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTTTGCGTACTCTGCCTTaGTTTGGGTTCGAATTCCAT +
Preference number: 5 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTLRTLP*FGFEFH
Trigger: ATGGAATTCGAACCCAAACAAAGGCAGAGTACGCAA...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp TCTCCGTACCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATATCCAGTTCTCTCATCTaGATGGCAGTTACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: SPYHASTIQRNPVNHYTISSSLI*MAVTVL
Trigger: AAGAACAGTAACTGCCATCAAGATGAGAGAACTGGA...TATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGGTACGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CAA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATATTCCAAAACCCTTATTaGTGTCCCACCTGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQIFQNPY*CPTCVC
Trigger: GCACACACAGGTGGGACACAAATAAGGGTTTTGGAA...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp CAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAGTTACTTCCAAACTCTaGGTTTCCAGGGACTTCCTG +
Preference number: 5 (lower is better)
Translates to: QYYTEKPSQPLYHRLRYLVTSKL*VSRDFL
Trigger: CAGGAAGTCCCTGGAAACCAAGAGTTTGGAAGTAAC...TAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CAA 90 bp GTGCTTCTACAAGACTATATGACCCCTTCATGTTGGCTTTTCTTGCAAAGTAAACACCTTCTTGCAGCTTaGTGGATGGATTCACAGAAA +
Preference number: 5 (lower is better)
Translates to: VLLQDYMTPSCWLFLQSKHLLAA*WMDSQK
Trigger: TTTCTGTGAATCCATCCACAAAGCTGCAAGAAGGTG...TTTACTTTGCAAGAAAAGCCAACATGAAGGGGTCATATAGTCTTGTAGAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650339.1
CDS-3UTR CAA 90 bp TTAGTACCTGAAAGTCAACCCAGTGCTCCCTTTGCTTATTATTTGTCTATAAAACACAGAGCCACCTTCTaGCAGCTTTGTGGATGGATT +
Preference number: 5 (lower is better)
Translates to: LVPESQPSAPFAYYLSIKHRATF*QLCGWI
Trigger: AATCCATCCACAAAGCTGCAAGAAGGTGGCTCTGTG...TTTTATAGACAAATAATAAGCAAAGGGAGCACTGGGTTGACTTTCAGGTACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CAA 90 bp TTGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACACAGTGTCTCCTTCTTaGACACTCTCAGAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: LYIQIKELLQFSHLDGSYTVSPS*TLSEGK
Trigger: TTTTCCTTCTGAGAGTGTCAAAGAAGGAGACACTGT...GTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTACAGTGTCTCCTTCTTaGACACTCTCAGAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTTVSPS*TLSEGK
Trigger: TTTTCCTTCTGAGAGTGTCAAAGAAGGAGACACTGT...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp CCTCTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCAACAGTGTCTCCTTCTTaGACACTCTCAGAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: PLSSLFFSRNDEQYQGFATVSPS*TLSEGK
Trigger: TTTTCCTTCTGAGAGTGTCAAAGAAGGAGACACTGT...TGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp TCTCCGTACCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGCATTAGCTACACTTTaGACTTCTGTGCTTCTACAA +
Preference number: 5 (lower is better)
Translates to: SPYHASTIQRNPVNHYTIALATL*TSVLLQ
Trigger: TTGTAGAAGCACAGAAGTCAAAAGTGTAGCTAATGC...TATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGGTACGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CAA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTCTGCCTCTCAGCTCATaGTTTTTCTCAAGGAATGAT +
Preference number: 5 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTLPLSS*FFSRND
Trigger: ATCATTCCTTGAGAAAAACAATGAGCTGAGAGGCAG...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp ATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTTCTGCCTCTCAGCTCATaGTTTTTCTCAAGGAATGAT +
Preference number: 5 (lower is better)
Translates to: IYRSRNSSSSLILMAVTVLPLSS*FFSRND
Trigger: ATCATTCCTTGAGAAAAACAATGAGCTGAGAGGCAG...AACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp TGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTTCCAGTTCTCTCATCTaGATGGCAGTTACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: CIYRSRNSSSSLILMAVTSSSLI*MAVTVL
Trigger: AAGAACAGTAACTGCCATCAAGATGAGAGAACTGGA...AGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp CCTCTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCATCCAGTTCTCTCATCTaGATGGCAGTTACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: PLSSLFFSRNDEQYQGFASSSLI*MAVTVL
Trigger: AAGAACAGTAACTGCCATCAAGATGAGAGAACTGGA...TGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATACACCTTCTTGCAGCTTaGTGGATGGATTCACAGAAA +
Preference number: 5 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQIHLLAA*WMDSQK
Trigger: TTTCTGTGAATCCATCCACAAAGCTGCAAGAAGGTG...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp CAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAGTACTCTGCCTTTGTTaGGGTTCGAATTCCATGTCA +
Preference number: 5 (lower is better)
Translates to: QYYTEKPSQPLYHRLRYLVLCLC*GSNSMS
Trigger: TGACATGGAATTCGAACCCAAACAAAGGCAGAGTAC...TAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000650339.1
CDS-3UTR CAA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATATTGCGTACTCTGCCTTaGTTTGGGTTCGAATTCCAT +
Preference number: 5 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQILRTLP*FGFEFH
Trigger: ATGGAATTCGAACCCAAACAAAGGCAGAGTACGCAA...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp TCTCCGTACCATGCCAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAATTGACATAAAGTGTTaGCGTACTCTGCCTTTGTTT +
Preference number: 5 (lower is better)
Translates to: SPYHASTIQRNPVNHYTIIDIKC*RTLPLF
Trigger: AAACAAAGGCAGAGTACGCAAACACTTTATGTCAAT...TATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTGGCATGGTACGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000650339.1
CDS-3UTR CAA 90 bp TTGTATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACGCATTAGCTACACTTTaGACTTCTGTGCTTCTACAA +
Preference number: 5 (lower is better)
Translates to: LYIQIKELLQFSHLDGSYALATL*TSVLLQ
Trigger: TTGTAGAAGCACAGAAGTCAAAAGTGTAGCTAATGC...GTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp CCTCTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCAGCATTAGCTACACTTTaGACTTCTGTGCTTCTACAA +
Preference number: 5 (lower is better)
Translates to: PLSSLFFSRNDEQYQGFAALATL*TSVLLQ
Trigger: TTGTAGAAGCACAGAAGTCAAAAGTGTAGCTAATGC...TGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGGCATTAGCTACACTTTaGACTTCTGTGCTTCTACAA +
Preference number: 5 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQALATL*TSVLLQ
Trigger: TTGTAGAAGCACAGAAGTCAAAAGTGTAGCTAATGC...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS GCA 90 bp CCCACAGGCATTGGCAGAAAAATACAAATTTGCTGCCAAGGTAGTTaGCAGGGCAACCTTCAAATACAATTTTCTATTTGTCATATAAAC +
Preference number: 5 (lower is better)
Translates to: PTGIGRKIQICCQGS*QGNLQIQFSICHIN
Trigger: GTTTATATGACAAATAGAAAATTGTATTTGAAGGTTGCCCTGGCAACTACCTTGGCAGCAAATTTGTATTTTTCTGCCAATGCCTGTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603679.1
CDS-3UTR CAA 90 bp TATATACAGATCAAGGAACTCCTCCAGTTCTCTCATCTTGATGGCAGTTACTGTATTGACATAAAGTGTTaGCGTACTCTGCCTTTGTTT +
Preference number: 5 (lower is better)
Translates to: YIQIKELLQFSHLDGSYCIDIKC*RTLPLF
Trigger: AAACAAAGGCAGAGTACGCAAACACTTTATGTCAAT...ACAGTAACTGCCATCAAGATGAGAGAACTGGAGGAGTTCCTTGATCTGTATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp CTCAGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATTGACATAAAGTGTTaGCGTACTCTGCCTTTGTTT +
Preference number: 5 (lower is better)
Translates to: LSSLFFSRNDEQYQGFAQIDIKC*RTLPLF
Trigger: AAACAAAGGCAGAGTACGCAAACACTTTATGTCAAT...CTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATAACAGTGTCTCCTTCTTaGACACTCTCAGAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQITVSPS*TLSEGK
Trigger: TTTTCCTTCTGAGAGTGTCAAAGAAGGAGACACTGT...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS-3UTR CAA 90 bp GAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTAGTACCTGAAAGTGCATTAGCTACACTTTaGACTTCTGTGCTTCTACAA +
Preference number: 5 (lower is better)
Translates to: EKPSQPLYHRLRYLVPESALATL*TSVLLQ
Trigger: TTGTAGAAGCACAGAAGTCAAAAGTGTAGCTAATGC...ACTTTCAGGTACTAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CAA 90 bp CAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTACTGCCTCTCAGCTCATaGTTTTTCTCAAGGAATGAT +
Preference number: 5 (lower is better)
Translates to: QYYTEKPSQPLYHRLRYLLPLSS*FFSRND
Trigger: ATCATTCCTTGAGAAAAACAATGAGCTGAGAGGCAG...TAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CAA 90 bp CAGTACTATACAGAGAAACCCAGTCAACCATTATACCATAGGTTGAGGTATTTATCCAGTTCTCTCATCTaGATGGCAGTTACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: QYYTEKPSQPLYHRLRYLSSSLI*MAVTVL
Trigger: AAGAACAGTAACTGCCATCAAGATGAGAGAACTGGA...TAAATACCTCAACCTATGGTATAATGGTTGACTGGGTTTCTCTGTATAGTACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CAA 90 bp TTAGTACCTGAAAGTCAACCCAGTGCTCCCTTTGCTTATTATTTGTCTATAAAACTGCCTCTCAGCTCATaGTTTTTCTCAAGGAATGAT +
Preference number: 5 (lower is better)
Translates to: LVPESQPSAPFAYYLSIKLPLSS*FFSRND
Trigger: ATCATTCCTTGAGAAAAACAATGAGCTGAGAGGCAG...TTTTATAGACAAATAATAAGCAAAGGGAGCACTGGGTTGACTTTCAGGTACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000650339.1
CDS-3UTR CAA 90 bp AGCTCATTGTTTTTCTCAAGGAATGATGAGCAGTATCAAGGATTTGCACAGATAATTGACATAAAGTGTTaGCGTACTCTGCCTTTGTTT +
Preference number: 5 (lower is better)
Translates to: SSLFFSRNDEQYQGFAQIIDIKC*RTLPLF
Trigger: AAACAAAGGCAGAGTACGCAAACACTTTATGTCAAT...TATCTGTGCAAATCCTTGATACTGCTCATCATTCCTTGAGAAAAACAATGAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370119.8
ENST00000650339.1
CDS CAA 72 bp AGCCTGTCAAATGGGTATACATCAGCAACTGAACACTaGACTGTGATCGGCTTCCCAGCCTCCAGAGGGCCA +
Preference number: 6 (lower is better)
Translates to: SLSNGYTSATEH*TVIGFPASRGP
Trigger: TGGCCCTCTGGAGGCTGGGAAGCCGATCACAGTCAAGTGTTCAGTTGCTGATGTATACCCATTTGACAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
CDS CAA 72 bp AGCCAAGTGCCAGACCTCTTAAGACTTGGCATTTGTTaGCAGTCCTGTTTGCACTCCACCGCCAAGTATGGC +
Preference number: 6 (lower is better)
Translates to: SQVPDLLRLGIC*QSCLHSTAKYG
Trigger: GCCATACTTGGCGGTGGAGTGCAAACAGGACTGCAAACAAATGCCAAGTCTTAAGAGGTCTGGCACTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603679.1
CDS CAA 90 bp CACTCCAATAGCCAAGTGCCAGACCTCTTAAGACTTGGCATTTGTTaGCAGTCCTGTTTGCACTCCACCGCCAAGTATGGCCTCCATTAC +
Preference number: 6 (lower is better)
Translates to: HSNSQVPDLLRLGIC*QSCLHSTAKYGLHY
Trigger: GTAATGGAGGCCATACTTGGCGGTGGAGTGCAAACAGGACTGCAAACAAATGCCAAGTCTTAAGAGGTCTGGCACTTGGCTATTGGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603679.1
CDS TCA 72 bp TATCTCCAGCCTGTCAAATGGGTATACATCAGCAACTaGACACTTGACTGTGATCGGCTTCCCAGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: YLQPVKWVYISN*TLDCDRLPSLQ
Trigger: CTGGAGGCTGGGAAGCCGATCACAGTCAAGTGTTCAGTTGCTGATGTATACCCATTTGACAGGCTGGAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
CDS CCA 72 bp GCCAAGTATGGCCTCCATTACACAATAGCAGCTAATTaGTGTGCAAGGGGTGTGATACTGATCAGCCAAGGC +
Preference number: 6 (lower is better)
Translates to: AKYGLHYTIAAN*CARGVILISQG
Trigger: GCCTTGGCTGATCAGTATCACACCCCTTGCACACCAATTAGCTGCTATTGTGTAATGGAGGCCATACTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603679.1
CDS CAA 90 bp CAAGTGCCAGACCTCTTAAGACTTGGCATTTGTTTGCAGTCCTGTTaGCACTCCACCGCCAAGTATGGCCTCCATTACACAATAGCAGCT +
Preference number: 6 (lower is better)
Translates to: QVPDLLRLGICLQSC*HSTAKYGLHYTIAA
Trigger: AGCTGCTATTGTGTAATGGAGGCCATACTTGGCGGTGGAGTGCAAACAGGACTGCAAACAAATGCCAAGTCTTAAGAGGTCTGGCACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603679.1
CDS TCA 72 bp GTGGTGCTGCAAGTCAATGAGACGGAGTCACCAATCTaGGCAAGATATCTAGATTCTGGGGTGGTCTCGATT +
Preference number: 6 (lower is better)
Translates to: VVLQVNETESPI*ARYLDSGVVSI
Trigger: AATCGAGACCACCCCAGAATCTAGATATCTTGCTCAGATTGGTGACTCCGTCTCATTGACTTGCAGCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS TCA 72 bp GCATTCACAAGAGGGCTTAGGAGATTAAGGGGCCCCTaGAGTTTCTCCAATGAGGATACTGCTCCTCTCTTT +
Preference number: 6 (lower is better)
Translates to: AFTRGLRRLRGP*SFSNEDTAPLF
Trigger: AAAGAGAGGAGCAGTATCCTCATTGGAGAAACTTCAGGGGCCCCTTAATCTCCTAAGCCCTCTTGTGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603679.1
CDS CAA 72 bp GACCTCTTAAGACTTGGCATTTGTTTGCAGTCCTGTTaGCACTCCACCGCCAAGTATGGCCTCCATTACACA +
Preference number: 6 (lower is better)
Translates to: DLLRLGICLQSC*HSTAKYGLHYT
Trigger: TGTGTAATGGAGGCCATACTTGGCGGTGGAGTGCAAACAGGACTGCAAACAAATGCCAAGTCTTAAGAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603679.1
CDS GCA 72 bp GTCTTCCCCACAGGCATTGGCAGAAAAATACAAATTTaGTGCCAAGGTAGTTGCCAGGGCAACCTTCAAATA +
Preference number: 6 (lower is better)
Translates to: VFPTGIGRKIQI*CQGSCQGNLQI
Trigger: TATTTGAAGGTTGCCCTGGCAACTACCTTGGCAGCAAATTTGTATTTTTCTGCCAATGCCTGTGGGGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603679.1
CDS CCA 72 bp GACGGAGTCACCAATCTGAGCAAGATATCTAGATTCTaGGGTGGTCTCGATTTTAAAAGCTTGAGAAGCTGC +
Preference number: 6 (lower is better)
Translates to: DGVTNLSKISRF*GGLDFKSLRSC
Trigger: GCAGCTTCTCAAGCTTTTAAAATCGAGACCACCCCAGAATCTAGATATCTTGCTCAGATTGGTGACTCCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS TCA 72 bp AGCTTGAGAAGCTGCAAACATTATCCAAAGTATATTTaGGGCTCCAAGGATCACGACCATCTTCCCAGGCAT +
Preference number: 6 (lower is better)
Translates to: SLRSCKHYPKYI*GSKDHDHLPRH
Trigger: ATGCCTGGGAAGATGGTCGTGATCCTTGGAGCCTCAAATATACTTTGGATAATGTTTGCAGCTTCTCAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS CAA 72 bp AAGCTTGAGAAGCTGCAAACATTATCCAAAGTATATTaGAGGCTCCAAGGATCACGACCATCTTCCCAGGCA +
Preference number: 6 (lower is better)
Translates to: KLEKLQTLSKVY*RLQGSRPSSQA
Trigger: TGCCTGGGAAGATGGTCGTGATCCTTGGAGCCTCAAATATACTTTGGATAATGTTTGCAGCTTCTCAAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294728.7
ENST00000347652.6
ENST00000370115.1
ENST00000370119.8
ENST00000650339.1
CDS TCA 72 bp TGGTGTGCAAGGGGTGTGATACTGATCAGCCAAGGCTaGTGTATTTTGTTTACACCAATAAGATCAGCAGAT +
Preference number: 6 (lower is better)
Translates to: WCARGVILISQG*CILFTPIRSAD
Trigger: ATCTGCTGATCTTATTGGTGTAAACAAAATACATCAGCCTTGGCTGATCAGTATCACACCCCTTGCACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603679.1
CDS TCA 72 bp TCTGATGTAGATTCAAATTTTCTCTGCATTGACAAGTaGTTGCTCACTCCAATAGCCAAGTGCCAGACCTCT +
Preference number: 6 (lower is better)
Translates to: SDVDSNFLCIDK*LLTPIAKCQTS
Trigger: AGAGGTCTGGCACTTGGCTATTGGAGTGAGCAATCACTTGTCAATGCAGAGAAAATTTGAATCTACATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603679.1
CDS CAA 72 bp ATTGTCTCAGTCCTGGCAGAAACTAGAGATCTGACTTaGGTGATTACTACATTCTTTCCAGAGCTTTCTAAT +
Preference number: 6 (lower is better)
Translates to: IVSVLAETRDLT*VITTFFPELSN
Trigger: ATTAGAAAGCTCTGGAAAGAATGTAGTAATCACCAAAGTCAGATCTCTAGTTTCTGCCAGGACTGAGACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603679.1
CDS TCA 72 bp CCCAACCTCATTGGAAGCACTGATTACATATACCCCTaGATCATTTTGAGTGACATGATACAAAGTAAATGT +
Preference number: 6 (lower is better)
Translates to: PNLIGSTDYIYP*IILSDMIQSKC
Trigger: ACATTTACTTTGTATCATGTCACTCAAAATGATTCAGGGGTATATGTAATCAGTGCTTCCAATGAGGTTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603679.1
CDS CCA 72 bp ACTTGGATTCAAATAGATTCAGGTTCAGTTGTAAAATaGAAGGGAGGGTACAAGTTTTTAACAAGAACAGGA +
Preference number: 6 (lower is better)
Translates to: TWIQIDSGSVVK*KGGYKFLTRTG
Trigger: TCCTGTTCTTGTTAAAAACTTGTACCCTCCCTTCCATTTTACAACTGAACCTGAATCTATTTGAATCCAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603679.1
CDS TCA 72 bp AGATCAATTCTTTTCAGGATAATCACTGCAGGTGGATaGCTAGAAGTTTCATATATAATCGTGATGTTTTCC +
Preference number: 6 (lower is better)
Translates to: RSILFRIITAGG*LEVSYIIVMFS
Trigger: GGAAAACATCACGATTATATATGAAACTTCTAGTCATCCACCTGCAGTGATTATCCTGAAAAGAATTGATCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603679.1