Pregenerated sensors for VBP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000155959Ensembl transcript IDs: ENST00000286428.7, ENST00000460509.1, ENST00000535916.5, ENST00000625964.2
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTTCAGGAATCCCCAGGTaGAGCCGCCGCCCATTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTSSESNISQLEREKVNCSGIPR*SRRPFP Trigger: AGGGAATGGGCGGCGGCTCCACCTGGGGATTCCTGA...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000286428.7 |
||
| CDS-3UTR CCA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTGCCGCCCATTCCCTGTaGCCATTTCTCCTTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TTSSESNISQLEREKVNCAAHSL*PFLLCH Trigger: GTGGCAAAGGAGAAATGGCCACAGGGAATGGGCGGC...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000286428.7 |
||
| CDS-3UTR CCA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTGAGTGGAAGGACTACTaGTCCTTAGGCCTTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TTSSESNISQLEREKVNCEWKDY*SLGLAG Trigger: CCCAGCAAGGCCTAAGGACCAGTAGTCCTTCCACTC...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000625964.2 |
||
| CDS-3UTR CCA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTGCTCTGGGGATGGAGTaGAAGGACTACTGGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TTSSESNISQLEREKVNCALGME*KDYWSL Trigger: TAAGGACCAGTAGTCCTTCCACTCCATCCCCAGAGC...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000625964.2 |
||
| CDS-3UTR CCA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTCTGATGCTCTGGGGATaGAGTGGAAGGACTACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TTSSESNISQLEREKVNCLMLWG*SGRTTG Trigger: ACCAGTAGTCCTTCCACTCCATCCCCAGAGCATCAG...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000625964.2 |
||
| CDS-3UTR TCA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTGAATCTACATCTTCCTaGTGCTCTGGGGATGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TTSSESNISQLEREKVNCESTSS*CSGDGV Trigger: CACTCCATCCCCAGAGCATCAGGAAGATGTAGATTC...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000625964.2 |
||
| CDS-3UTR CCA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTCTGCCAGCAAGAATCTaGTCTCCATTGAGTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTSSESNISQLEREKVNCLPARI*SPLSWW Trigger: CCACCAACTCAATGGAGACCAGATTCTTGCTGGCAG...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000286428.7 ENST00000625964.2 |
||
| CDS-3UTR CCA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTATCTTCCTGATGCTCTaGGGATGGAGTGGAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: TTSSESNISQLEREKVNCIFLML*GWSGRT Trigger: AGTCCTTCCACTCCATCCCCAGAGCATCAGGAAGAT...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000625964.2 |
||
| CDS-3UTR TCA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTTCCCAGGCTGTTTCATaGAGGAATCTACATCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TTSSESNISQLEREKVNCSQAVS*RNLHLP Trigger: TGGAAGATGTAGATTCCTTCATGAAACAGCCTGGGA...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000286428.7 |
||
| CDS-3UTR TCA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTATCGGTAGGAGGAACTaGAGCTTTGCAATACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TTSSESNISQLEREKVNCIGRRN*SFAIQV Trigger: AACCTGTATTGCAAAGCTTCAGTTCCTCCTACCGAT...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000286428.7 ENST00000625964.2 |
||
| CDS-3UTR TCA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTTCCCAGGCTGTTTCATaGAGGAATCTACATCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTSSESNISQLEREKVNCSQAVS*RNLHLP Trigger: AGGAAGATGTAGATTCCTTCATGAAACAGCCTGGGA...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000625964.2 |
||
| CDS-3UTR GCA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTGCAATACAGGTTATCTaGCAGCAAGAATCTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TTSSESNISQLEREKVNCAIQVI*QQESGL Trigger: GAGACCAGATTCTTGCTGGCAGATAACCTGTATTGC...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000286428.7 ENST00000625964.2 |
||
| CDS-3UTR GCA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTGAGGAACTGAAGCTTTaGAATACAGGTTATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TTSSESNISQLEREKVNCEELKL*NTGYLP Trigger: TGGCAGATAACCTGTATTGCAAAGCTTCAGTTCCTC...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000286428.7 ENST00000625964.2 |
||
| CDS-3UTR GCA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTCCCTTATGTTGGCATTaGAAAGACACTGCACTTATC | + |
|
Preference number: 4 (lower is better) Translates to: TTSSESNISQLEREKVNCPLCWH*KDTALI Trigger: GATAAGTGCAGTGTCTTTGCAATGCCAACATAAGGG...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000286428.7 ENST00000625964.2 |
||
| CDS-3UTR TCA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTAGCCTTCTTTTCTTTTaGGCAAGGTTGAGTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: TTSSESNISQLEREKVNCSLLFF*ARLSSI Trigger: TATGGAACTCAACCTTGCTCAAAAGAAAAGAAGGCT...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000286428.7 ENST00000625964.2 |
||
| CDS-3UTR TCA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTTCTGTGGTAGTAAATTaGTCTCGAAGAAAGTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TTSSESNISQLEREKVNCSVVVN*SRRKSR Trigger: CCTTGACTTTCTTCGAGATCAATTTACTACCACAGA...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000286428.7 ENST00000625964.2 |
||
| CDS-3UTR CCA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTATAAACTTATACTTCTaGTACTGTTCATCCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTSSESNISQLEREKVNCINLYF*YCSSSF Trigger: GAAGCTGGATGAACAGTACCAGAAGTATAAGTTTAT...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000286428.7 ENST00000625964.2 |
||
| CDS-3UTR CAA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTTTAACGGCCGCCATCTaGGGGATGCGAGCGCGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: TTSSESNISQLEREKVNCLTAAI*GMRARD Trigger: GTCGCGCGCTCGCATCCCCAAGATGGCGGCCGTTAA...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000286428.7 |
||
| CDS-3UTR CAA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTGTGGCCATTTCTCCTTaGCCACAACTGTCCTTAACG | + |
|
Preference number: 5 (lower is better) Translates to: TTSSESNISQLEREKVNCVAISP*PQLSLT Trigger: CGTTAAGGACAGTTGTGGCAAAGGAGAAATGGCCAC...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000286428.7 |
||
| CDS-3UTR CAA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTGGAGGAACTGAAGCTTaGCAATACAGGTTATCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TTSSESNISQLEREKVNCGGTEA*QYRLSA Trigger: GGCAGATAACCTGTATTGCAAAGCTTCAGTTCCTCC...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000286428.7 ENST00000625964.2 |
||
| CDS-3UTR CAA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTTGCCAGCATTATGCTTaGTTCTTGGTAGAGTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: TTSSESNISQLEREKVNCCQHYA*FLVESS Trigger: GGATGACTCTACCAAGAACAAAGCATAATGCTGGCA...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000286428.7 ENST00000625964.2 |
||
| CDS-3UTR CAA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTAGAATCTGGTCTCCATaGAGTTGGTGGACTCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TTSSESNISQLEREKVNCRIWSP*SWWTLF Trigger: AAAAAGAGTCCACCAACTCAATGGAGACCAGATTCT...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000286428.7 ENST00000625964.2 |
||
| CDS-3UTR CAA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTGGGAATCAAGATTCTTaGTGGCAGTCGATAAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: TTSSESNISQLEREKVNCGNQDS*WQSINS Trigger: AGAATTTATCGACTGCCACAAAGAATCTTGATTCCC...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000286428.7 ENST00000625964.2 |
||
| CDS-3UTR CAA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTTTCTGTGGTAGTAAATaGATCTCGAAGAAAGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TTSSESNISQLEREKVNCFCGSK*ISKKVK Trigger: CTTGACTTTCTTCGAGATCAATTTACTACCACAGAA...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000286428.7 ENST00000625964.2 |
||
| CDS-3UTR CAA 90 bp | ACCACATCAAGTGAGAGTAACATCAGCCAATTAGAAAGGGAAAAAGTAAACTGTCATTATGCTTTGTTCTaGGTAGAGTCATCCTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TTSSESNISQLEREKVNCHYALF*VESSLF Trigger: AAACAAGGATGACTCTACCAAGAACAAAGCATAATG...ACAGTTTACTTTTTCCCTTTCTAATTGGCTGATGTTACTCTCACTTGATGTGGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000286428.7 ENST00000625964.2 |
||
| CDS CAA 90 bp | GCCCCCAACCACAGACACACTTTATCGGTAGGAGGAACTGAAGCTTaGCAATACAGGTTATCTGCCAGCAAGAATCTGGTCTCCATTGAG | + |
|
Preference number: 6 (lower is better) Translates to: APNHRHTLSVGGTEA*QYRLSASKNLVSIE Trigger: CTCAATGGAGACCAGATTCTTGCTGGCAGATAACCTGTATTGCAAAGCTTCAGTTCCTCCTACCGATAAAGTGTGTCTGTGGTTGGGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000286428.7 ENST00000460509.1 ENST00000535916.5 ENST00000625964.2 |
||
| CDS TCA 72 bp | CCCCAACCACAGACACACTTTATCGGTAGGAGGAACTaGAGCTTTGCAATACAGGTTATCTGCCAGCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PQPQTHFIGRRN*SFAIQVICQQE Trigger: TTCTTGCTGGCAGATAACCTGTATTGCAAAGCTTCAGTTCCTCCTACCGATAAAGTGTGTCTGTGGTTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000286428.7 ENST00000460509.1 ENST00000535916.5 ENST00000625964.2 |
||
| CDS CAA 72 bp | CACAGACACACTTTATCGGTAGGAGGAACTGAAGCTTaGCAATACAGGTTATCTGCCAGCAAGAATCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: HRHTLSVGGTEA*QYRLSASKNLV Trigger: GACCAGATTCTTGCTGGCAGATAACCTGTATTGCAAAGCTTCAGTTCCTCCTACCGATAAAGTGTGTCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000286428.7 ENST00000460509.1 ENST00000535916.5 ENST00000625964.2 |
||