RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VAV2 (Homo sapiens)

Ensembl gene IDs: ENSG00000160293

Ensembl transcript IDs: ENST00000371850.8, ENST00000371851.1, ENST00000406606.7, ENST00000472905.1, ENST00000486113.1

Found 701 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGGGCAGGCGATGGGCCTCTGGCCTCAGCCACTACCCAGAGCCTaGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTGGGTGG +
Preference number: 1 (lower is better)
Translates to: QGQAMGLWPQPLPRA*LAALSVPPPLRSGW
Trigger: CCACCCAGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGGCTGAGGCCAGAGGCCCATCGCCTGCCCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR GCA 90 bp TCTGGCCTCAGCCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTaGCCCCTCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTC +
Preference number: 1 (lower is better)
Translates to: SGLSHYPEPGSQRCR*PLLCALGGASPGFL
Trigger: GAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGGCTGAGGCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR CCA 90 bp GCAGAGGGCGACCACAGTGCTCTCTCCTCCCGCGCCCTAGCACAGTaGGGCAAGTGGGCCCACAGTGAACAGCCTGGCTCTGGTCCCGTC +
Preference number: 1 (lower is better)
Translates to: AEGDHSALSSRALAQ*GKWAHSEQPGSGPV
Trigger: GACGGGACCAGAGCCAGGCTGTTCACTGTGGGCCCACTTGCCCCACTGTGCTAGGGCGCGGGAGGAGAGAGCACTGTGGTCGCCCTCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR GCA 90 bp CAGGGAAGTCTTGGGAGCCAGAGTGGCTGCAGAGGGCGACCACAGTaGTCTCTCCTCCCGCGCCCTAGCACAGTGGGGCAAGTGGGCCCA +
Preference number: 1 (lower is better)
Translates to: QGSLGSQSGCRGRPQ*SLLPRPSTVGQVGP
Trigger: TGGGCCCACTTGCCCCACTGTGCTAGGGCGCGGGAGGAGAGAGCACTGTGGTCGCCCTCTGCAGCCACTCTGGCTCCCAAGACTTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR CCA 90 bp CTCCTGAAGGCCATCTCAGTTGGACAGGGGCAGGCGATGGGCCTCTaGCCTCAGCCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTG +
Preference number: 1 (lower is better)
Translates to: LLKAISVGQGQAMGL*PQPLPRAWLAALSV
Trigger: CACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGGCTGAGGCCAGAGGCCCATCGCCTGCCCCTGTCCAACTGAGATGGCCTTCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR CCA 90 bp GTTTGTAGGCTGCAGGGGCCCTTGGAAGGAAGCCCTGCCAGGGGCTaGAACCAACCTCTCGTGCCAAGGCTGGGCAGACCCTCAGGGACC +
Preference number: 1 (lower is better)
Translates to: VCRLQGPLEGSPARG*NQPLVPRLGRPSGT
Trigger: GGTCCCTGAGGGTCTGCCCAGCCTTGGCACGAGAGGTTGGTTCCAGCCCCTGGCAGGGCTTCCTTCCAAGGGCCCCTGCAGCCTACAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR CCA 90 bp CAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTaGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATACCC +
Preference number: 1 (lower is better)
Translates to: QSLARSAVGAPSSAL*VGLAQVSSMYNSIP
Trigger: GGGTATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR TCA 90 bp CCTAGCCCTTCCTGGGACAGCATCTGCTGTTCAAACCTAGGCTCCTaGAGGCCATCTCAGTTGGACAGGGGCAGGCGATGGGCCTCTGGC +
Preference number: 1 (lower is better)
Translates to: PSPSWDSICCSNLGS*RPSQLDRGRRWASG
Trigger: GCCAGAGGCCCATCGCCTGCCCCTGTCCAACTGAGATGGCCTTCAGGAGCCTAGGTTTGAACAGCAGATGCTGTCCCAGGAAGGGCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR CCA 90 bp TCAGAGAGAGGGCAGGAAACGGTACCGCTGACCGGGCAGCAGGGTTaGAATTTCATCATTCCAAAGGCCCCTCCCAAGAGAGGGGCCTGC +
Preference number: 1 (lower is better)
Translates to: SERGQETVPLTGQQG*NFIIPKAPPKRGAC
Trigger: GCAGGCCCCTCTCTTGGGAGGGGCCTTTGGAATGATGAAATTCCAACCCTGCTGCCCGGTCAGCGGTACCGTTTCCTGCCCTCTCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR TCA 90 bp ACTCCAGAAAGGGCCTCTCAGAGAGAGGGCAGGAAACGGTACCGCTaGCCGGGCAGCAGGGTTGGAATTTCATCATTCCAAAGGCCCCTC +
Preference number: 1 (lower is better)
Translates to: TPERASQREGRKRYR*PGSRVGISSFQRPL
Trigger: GAGGGGCCTTTGGAATGATGAAATTCCAACCCTGCTGCCCGGTCAGCGGTACCGTTTCCTGCCCTCTCTCTGAGAGGCCCTTTCTGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR CCA 90 bp CTGTTACCAGGTCTCATGCAACATCAGGGTAGAGAAACCAGGGTCTaGCTAACCCAGCCAGAAGTCGAAGGCCAGGAGTTGTGGCTGGGG +
Preference number: 1 (lower is better)
Translates to: LLPGLMQHQGRETRV*LTQPEVEGQELWLG
Trigger: CCCCAGCCACAACTCCTGGCCTTCGACTTCTGGCTGGGTTAGCCAGACCCTGGTTTCTCTACCCTGATGTTGCATGAGACCTGGTAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR CCA 90 bp AGAGGGAGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTaGCAAGGAGCTGGGAGGGAGACACTGTTACCAGGTCTCATGCAA +
Preference number: 1 (lower is better)
Translates to: RGRRGYKKPRSQQRL*QGAGRETLLPGLMQ
Trigger: TTGCATGAGACCTGGTAACAGTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCTCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR TCA 90 bp TATCCCTGTGGGCAGTGGAAGACTGGGAGGTTGGTATTTCCCCTCTaGGTCACAGAGGAGCTAGAGACAGACTTCAGGGCTGGAGTGACT +
Preference number: 1 (lower is better)
Translates to: YPCGQWKTGRLVFPL*VTEELETDFRAGVT
Trigger: AGTCACTCCAGCCCTGAAGTCTGTCTCTAGCTCCTCTGTGACTCAGAGGGGAAATACCAACCTCCCAGTCTTCCACTGCCCACAGGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR CCA 90 bp TTAGGATTCTCAACACCCTCCCTATCCCTGTGGGCAGTGGAAGACTaGGAGGTTGGTATTTCCCCTCTGAGTCACAGAGGAGCTAGAGAC +
Preference number: 1 (lower is better)
Translates to: LGFSTPSLSLWAVED*EVGISPLSHRGARD
Trigger: GTCTCTAGCTCCTCTGTGACTCAGAGGGGAAATACCAACCTCCCAGTCTTCCACTGCCCACAGGGATAGGGAGGGTGTTGAGAATCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR CCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTaGCAGCGCGGCCAGGCAGACACCTTCCCAGGACTCCAGAAAGGG +
Preference number: 1 (lower is better)
Translates to: FFPAHFRVFTKDVLI*QRGQADTFPGLQKG
Trigger: CCCTTTCTGGAGTCCTGGGAAGGTGTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR CCA 90 bp ATTTCCCCTCTGAGTCACAGAGGAGCTAGAGACAGACTTCAGGGCTaGAGTGACTCTCCCAAGAAAATCTGCGAGTCTTGTCCACGTTCC +
Preference number: 1 (lower is better)
Translates to: ISPLSHRGARDRLQG*SDSPKKICESCPRS
Trigger: GGAACGTGGACAAGACTCGCAGATTTTCTTGGGAGAGTCACTCCAGCCCTGAAGTCTGTCTCTAGCTCCTCTGTGACTCAGAGGGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCGGTGCCCCCTCCTCTaGGCTCTGGGTGGGGCTAGC +
Preference number: 2 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPRCPLL*ALGGAS
Trigger: GCTAGCCCCACCCAGAGCGCAGAGGAGGGGGCACCG...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCGTCCGGGTGTGCCCCTaGCAAGGAGGGGAGTGGGGG +
Preference number: 2 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPVRVCP*QGGEWG
Trigger: CCCCCACTCCCCTCCTTGCCAGGGGCACACCCGGAC...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGGTCCGGGTGTGCCCCTaGCAAGGAGGGGAGTGGGGG +
Preference number: 2 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGVRVCP*QGGEWG
Trigger: CCCCCACTCCCCTCCTTGCCAGGGGCACACCCGGAC...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR TCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGGCTGAGTCCAGGGGCTaGGCAGAGGGTGTGGGGGCA +
Preference number: 2 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGAESRG*AEGVGA
Trigger: TGCCCCCACACCCTCTGCTCAGCCCCTGGACTCAGC...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGTCGCAGCGCTGTCGGTaGCCCCTCCTCTGCGCTCTG +
Preference number: 2 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGSQRCR*PLLCAL
Trigger: CAGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGA...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCAGAGGGCGACCACAGTaGTCTCTCCTCCCGCGCCCT +
Preference number: 2 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPRGRPQ*SLLPRP
Trigger: AGGGCGCGGGAGGAGAGAGCACTGTGGTCGCCCTCT...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCGGGAGCCAGAGTGGCTaGAGAGGGCGACCACAGTGC +
Preference number: 2 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPGSQSG*RGRPQC
Trigger: GCACTGTGGTCGCCCTCTGCAGCCACTCTGGCTCCC...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCCACTACCCAGAGCCTaGCTCGCAGCGCTGTCGGTG +
Preference number: 2 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPPLPRA*LAALSV
Trigger: CACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCGACAGGGGCAGGCGATaGGCCTCTGGCCTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: LALVPSASRGLTPPPGSSDRGRR*ASGLSH
Trigger: GTGGCTGAGGCCAGAGGCCCATCGCCTGCCCCTGTC...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR TCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCAGGAAACGGTACCGCTaGCCGGGCAGCAGGGTTGGA +
Preference number: 2 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPRKRYR*PGSRVG
Trigger: TCCAACCCTGCTGCCCGGTCAGCGGTACCGTTTCCT...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGCGATGGGCCTCTaGCCTCAGCCACTACCCAGA +
Preference number: 2 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPQAMGL*PQPLPR
Trigger: TCTGGGTAGTGGCTGAGGCCAGAGGCCCATCGCCTG...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGCACAGGCTGTGCAGCTaGCCAGAGGGAGAAGGGGCT +
Preference number: 2 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGHRLCS*PEGEGA
Trigger: AGCCCCTTCTCCCTCTGGCCAGCTGCACAGCCTGTG...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCGAAGGCCAGGAGTTGTaGCTGGGGGAGGTAATGGGG +
Preference number: 2 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPEGQEL*LGEVMG
Trigger: CCCCATTACCTCCCCCAGCCACAACTCCTGGCCTTC...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGGTCCCTAGCCCTTCCTaGGACAGCATCTGCTGTTCA +
Preference number: 2 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGVPSPS*DSICCS
Trigger: TGAACAGCAGATGCTGTCCCAGGAAGGGCTAGGGAC...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGGCTTTGGCAAGGAGCTaGGAGGGAGACACTGTTACC +
Preference number: 2 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGALARS*EGDTVT
Trigger: GGTAACAGTGTCTCCCTCCCAGCTCCTTGCCAAAGC...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR TCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGTCAAACCTAGGCTCCTaGAGGCCATCTCAGTTGGAC +
Preference number: 2 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGSNLGS*RPSQLD
Trigger: GTCCAACTGAGATGGCCTTCAGGAGCCTAGGTTTGA...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGTCCTGGGACAGCATCTaGTGTTCAAACCTAGGCTCC +
Preference number: 2 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGSWDSI*CSNLGS
Trigger: GGAGCCTAGGTTTGAACAGCAGATGCTGTCCCAGGA...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGTGGGCAGTGGAAGACTaGGAGGTTGGTATTTCCCCT +
Preference number: 2 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGWAVED*EVGISP
Trigger: AGGGGAAATACCAACCTCCCAGTCTTCCACTGCCCA...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR TCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCACTTCAGGGCTGGAGTaGCTCTCCCAAGAAAATCTG +
Preference number: 2 (lower is better)
Translates to: LALVPSASRGLTPPPGSSTSGLE*LSQENL
Trigger: CAGATTTTCTTGGGAGAGTCACTCCAGCCCTGAAGT...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTGACAGACTTCAGGGCTaGAGTGACTCTCCCAAGAAA +
Preference number: 2 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSDRLQG*SDSPKK
Trigger: TTTCTTGGGAGAGTCACTCCAGCCCTGAAGTCTGTC...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCGGAAGACTGGGAGGTTaGTATTTCCCCTCTGAGTCA +
Preference number: 2 (lower is better)
Translates to: LALVPSASRGLTPPPGSSGRLGG*YFPSES
Trigger: TGACTCAGAGGGGAAATACCAACCTCCCAGTCTTCC...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGCCCTCCTCTGCGCTCTaGGTGGGGCTAGCCCAGGTT +
Preference number: 2 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLPSSAL*VGLAQV
Trigger: AACCTGGGCTAGCCCCACCCAGAGCGCAGAGGAGGG...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGTCGCAGCGCTGTCGGTaGCCCCTCCTCTGCGCTCTG +
Preference number: 2 (lower is better)
Translates to: THWQMYSLCPFGVPASWGSQRCR*PLLCAL
Trigger: CAGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGA...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACGGCTCTGGTCCCGTCTaGCTCCCGAGGTCTGACACC +
Preference number: 2 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHGSGPV*LPRSDT
Trigger: GGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCC...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGGCCATCCTCCGCGCCTaGTGGGCCGCAGGTCGCAAA +
Preference number: 2 (lower is better)
Translates to: THWQMYSLCPFGVPASWGAILRA*WAAGRK
Trigger: TTTGCGACCTGCGGCCCAGCAGGCGCGGAGGATGGC...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGGACAGGGGCAGGCGATaGGCCTCTGGCCTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: THWQMYSLCPFGVPASWGDRGRR*ASGLSH
Trigger: GTGGCTGAGGCCAGAGGCCCATCGCCTGCCCCTGTC...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR CAA 90 bp CTCAGAGAGAGGGCAGGAAACGGTACCGCTGACCGGGCAGCAGGGTaGGAATTTCATCATTCCAAAGGCCCCTCCCAAGAGAGGGGCCTG +
Preference number: 2 (lower is better)
Translates to: LRERAGNGTADRAAG*EFHHSKGPSQERGL
Trigger: CAGGCCCCTCTCTTGGGAGGGGCCTTTGGAATGATGAAATTCCAACCCTGCTGCCCGGTCAGCGGTACCGTTTCCTGCCCTCTCTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR TCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGCAAGTGGGCCCACAGTaGACAGCCTGGCTCTGGTCC +
Preference number: 2 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGQVGPQ*TAWLWS
Trigger: GGACCAGAGCCAGGCTGTTCACTGTGGGCCCACTTG...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGCCACTACCCAGAGCCTaGCTCGCAGCGCTGTCGGTG +
Preference number: 2 (lower is better)
Translates to: THWQMYSLCPFGVPASWGPLPRA*LAALSV
Trigger: CACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGGAAGGCCATCTCAGTTaGACAGGGGCAGGCGATGGG +
Preference number: 2 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLEGHLS*TGAGDG
Trigger: CCCATCGCCTGCCCCTGTCCAACTGAGATGGCCTTC...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGTCTTGGGAGCCAGAGTaGCTGCAGAGGGCGACCACA +
Preference number: 2 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLSWEPE*LQRATT
Trigger: TGTGGTCGCCCTCTGCAGCCACTCTGGCTCCCAAGA...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACGAGGGGCCTGCCGTGTaGGGTCCGGGTGTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADEGPAV*GPGVPL
Trigger: CAGGGGCACACCCGGACCCCACACGGCAGGCCCCTC...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACAGCCCTGCCAGGGGCTaGAACCAACCTCTCGTGCCA +
Preference number: 2 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHSPARG*NQPLVP
Trigger: TGGCACGAGAGGTTGGTTCCAGCCCCTGGCAGGGCT...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR TCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGCAAGTGGGCCCACAGTaGACAGCCTGGCTCTGGTCC +
Preference number: 2 (lower is better)
Translates to: THWQMYSLCPFGVPASWGQVGPQ*TAWLWS
Trigger: GGACCAGAGCCAGGCTGTTCACTGTGGGCCCACTTG...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGAGTAAACACAGGGGCTaGTGGCTTCCTCCCCGCCAT +
Preference number: 2 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLSKHRG*WLPPRH
Trigger: ATGGCGGGGAGGAAGCCAGCAGCCCCTGTGTTTACT...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGCAGGCGATGGGCCTCTaGCCTCAGCCACTACCCAGA +
Preference number: 2 (lower is better)
Translates to: THWQMYSLCPFGVPASWGQAMGL*PQPLPR
Trigger: TCTGGGTAGTGGCTGAGGCCAGAGGCCCATCGCCTG...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR TCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACAAAGACAGGCAAGGCTaGGTCCAGGGGCTGAGCAGA +
Preference number: 2 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHKDRQG*VQGLSR
Trigger: TCTGCTCAGCCCCTGGACTCAGCCTTGCCTGTCTTT...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR TCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGCACCCCGTCTCCTGCTaGAAACCATCGGACTCCCAG +
Preference number: 2 (lower is better)
Translates to: THWQMYSLCPFGVPASWGHPVSC*KPSDSQ
Trigger: CTGGGAGTCCGATGGTTTTCAGCAGGAGACGGGGTG...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGTCTGACACCTCCCCCTaGGAGCAGCAGGAAAAGACA +
Preference number: 2 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLSDTSP*EQQEKT
Trigger: TGTCTTTTCCTGCTGCTCCCAGGGGGAGGTGTCAGA...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGTCTTGGGAGCCAGAGTaGCTGCAGAGGGCGACCACA +
Preference number: 2 (lower is better)
Translates to: THWQMYSLCPFGVPASWGSWEPE*LQRATT
Trigger: TGTGGTCGCCCTCTGCAGCCACTCTGGCTCCCAAGA...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGAAAGATGTACTGATCTaGCAGCGCGGCCAGGCAGAC +
Preference number: 2 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLKDVLI*QRGQAD
Trigger: GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTT...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGCAGGTCGCAAAGTGCTaGGTGTACCCCGACACGGAG +
Preference number: 2 (lower is better)
Translates to: THWQMYSLCPFGVPASWGQVAKC*VYPDTE
Trigger: CTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTG...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR CAA 90 bp CAGAGGGAGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTaGGCAAGGAGCTGGGAGGGAGACACTGTTACCAGGTCTCATGCA +
Preference number: 2 (lower is better)
Translates to: QREKGLQEAQVSTEA*ARSWEGDTVTRSHA
Trigger: TGCATGAGACCTGGTAACAGTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCTCCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR TCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGTCAAACCTAGGCTCCTaGAGGCCATCTCAGTTGGAC +
Preference number: 2 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLSNLGS*RPSQLD
Trigger: GTCCAACTGAGATGGCCTTCAGGAGCCTAGGTTTGA...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCGGTGCCCCCTCCTCTaGGCTCTGGGTGGGGCTAGC +
Preference number: 2 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRRCPLL*ALGGAS
Trigger: GCTAGCCCCACCCAGAGCGCAGAGGAGGGGGCACCG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACCCCTCCTCTGCGCTCTaGGTGGGGCTAGCCCAGGTT +
Preference number: 2 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADPSSAL*VGLAQV
Trigger: AACCTGGGCTAGCCCCACCCAGAGCGCAGAGGAGGG...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACAAAGATGTACTGATCTaGCAGCGCGGCCAGGCAGAC +
Preference number: 2 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHKDVLI*QRGQAD
Trigger: GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTT...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR TCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGACTTCAGGGCTGGAGTaGCTCTCCCAAGAAAATCTG +
Preference number: 2 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLTSGLE*LSQENL
Trigger: CAGATTTTCTTGGGAGAGTCACTCCAGCCCTGAAGT...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR TCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTCAAACCTAGGCTCCTaGAGGCCATCTCAGTTGGAC +
Preference number: 2 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGSNLGS*RPSQLD
Trigger: GTCCAACTGAGATGGCCTTCAGGAGCCTAGGTTTGA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR TCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACCAAGTGGGCCCACAGTaGACAGCCTGGCTCTGGTCC +
Preference number: 2 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADQVGPQ*TAWLWS
Trigger: GGACCAGAGCCAGGCTGTTCACTGTGGGCCCACTTG...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR TCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTTACAAAAGATGTACTaGTCTGGCAGCGCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGLQKMY*SGSAAR
Trigger: CCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTCCTGGGACAGCATCTaGTGTTCAAACCTAGGCTCC +
Preference number: 2 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGSWDSI*CSNLGS
Trigger: GGAGCCTAGGTTTGAACAGCAGATGCTGTCCCAGGA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTGGGCAGTGGAAGACTaGGAGGTTGGTATTTCCCCT +
Preference number: 2 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGWAVED*EVGISP
Trigger: AGGGGAAATACCAACCTCCCAGTCTTCCACTGCCCA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGACAGGGGCAGGCGATaGGCCTCTGGCCTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRDRGRR*ASGLSH
Trigger: GTGGCTGAGGCCAGAGGCCCATCGCCTGCCCCTGTC...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGTCTGACACCTCCCCCTaGGAGCAGCAGGAAAAGACA +
Preference number: 2 (lower is better)
Translates to: THWQMYSLCPFGVPASWGSDTSP*EQQEKT
Trigger: TGTCTTTTCCTGCTGCTCCCAGGGGGAGGTGTCAGA...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR TCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTTGGTATTTCCCCTCTaGGTCACAGAGGAGCTAGAG +
Preference number: 2 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGLVFPL*VTEELE
Trigger: CTCTAGCTCCTCTGTGACTCAGAGGGGAAATACCAA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR TCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACTTGGTATTTCCCCTCTaGGTCACAGAGGAGCTAGAG +
Preference number: 2 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHLVFPL*VTEELE
Trigger: CTCTAGCTCCTCTGTGACTCAGAGGGGAAATACCAA...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR TCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGCAAGAGCACTTATTTTaGGTCGCCCGAGGCCCAGTT +
Preference number: 2 (lower is better)
Translates to: THWQMYSLCPFGVPASWGQEHLF*VARGPV
Trigger: AACTGGGCCTCGGGCGACTCAAAATAAGTGCTCTTG...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCTCTGGTCCCGTCTaGCTCCCGAGGTCTGACACC +
Preference number: 2 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRGSGPV*LPRSDT
Trigger: GGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCC...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACGACAGACTTCAGGGCTaGAGTGACTCTCCCAAGAAA +
Preference number: 2 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHDRLQG*SDSPKK
Trigger: TTTCTTGGGAGAGTCACTCCAGCCCTGAAGTCTGTC...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACGAAGGCCATCTCAGTTaGACAGGGGCAGGCGATGGG +
Preference number: 2 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADEGHLS*TGAGDG
Trigger: CCCATCGCCTGCCCCTGTCCAACTGAGATGGCCTTC...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACTCTTGGGAGCCAGAGTaGCTGCAGAGGGCGACCACA +
Preference number: 2 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADSWEPE*LQRATT
Trigger: TGTGGTCGCCCTCTGCAGCCACTCTGGCTCCCAAGA...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR TCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACAAAGACAGGCAAGGCTaGGTCCAGGGGCTGAGCAGA +
Preference number: 2 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADKDRQG*VQGLSR
Trigger: TCTGCTCAGCCCCTGGACTCAGCCTTGCCTGTCTTT...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR TCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCAGGAAACGGTACCGCTaGCCGGGCAGCAGGGTTGGA +
Preference number: 2 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRRKRYR*PGSRVG
Trigger: TCCAACCCTGCTGCCCGGTCAGCGGTACCGTTTCCT...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTCTCCCAAGAAAATCTaGGAGTCTTGTCCACGTTCC +
Preference number: 2 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGSPKKI*ESCPRS
Trigger: GGAACGTGGACAAGACTCGCAGATTTTCTTGGGAGA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGCCTGCCTTAGTGCAGTaGAAAAACCAAACCAAACAC +
Preference number: 2 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLPALVQ*KNQTKH
Trigger: GTGTTTGGTTTGGTTTTTGCACTGCACTAAGGCAGG...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGGGAAGACTGGGAGGTTaGTATTTCCCCTCTGAGTCA +
Preference number: 2 (lower is better)
Translates to: THWQMYSLCPFGVPASWGGRLGG*YFPSES
Trigger: TGACTCAGAGGGGAAATACCAACCTCCCAGTCTTCC...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGCCCTGTTTTCTTCCCTaGCCATTTCAGGGTTTTTAC +
Preference number: 2 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGPCFLP*PFQGFY
Trigger: GTAAAAACCCTGAAATGGGCAGGGAAGAAAACAGGG...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGTGTTACCAGGTCTCATaGAACATCAGGGTAGAGAAA +
Preference number: 2 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLCYQVS*NIRVEK
Trigger: TTTCTCTACCCTGATGTTGCATGAGACCTGGTAACA...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGACCGGGCAGCAGGGTTaGAATTTCATCATTCCAAAG +
Preference number: 2 (lower is better)
Translates to: THWQMYSLCPFGVPASWGTGQQG*NFIIPK
Trigger: CTTTGGAATGATGAAATTCCAACCCTGCTGCCCGGT...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATATCTCCCAAGAAAATCTaGGAGTCTTGTCCACGTTCC +
Preference number: 2 (lower is better)
Translates to: SSALWVGLAQVSSMYNSISPKKI*ESCPRS
Trigger: GGAACGTGGACAAGACTCGCAGATTTTCTTGGGAGA...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGCCCTGTTTTCTTCCCTaGCCATTTCAGGGTTTTTAC +
Preference number: 2 (lower is better)
Translates to: THWQMYSLCPFGVPASWGPCFLP*PFQGFY
Trigger: GTAAAAACCCTGAAATGGGCAGGGAAGAAAACAGGG...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACTGTTACCAGGTCTCATaGAACATCAGGGTAGAGAAA +
Preference number: 2 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHCYQVS*NIRVEK
Trigger: TTTCTCTACCCTGATGTTGCATGAGACCTGGTAACA...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR TCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACACTTCAGGGCTGGAGTaGCTCTCCCAAGAAAATCTG +
Preference number: 2 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADTSGLE*LSQENL
Trigger: CAGATTTTCTTGGGAGAGTCACTCCAGCCCTGAAGT...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGTCCCTAGCCCTTCCTaGGACAGCATCTGCTGTTCA +
Preference number: 2 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRVPSPS*DSICCS
Trigger: TGAACAGCAGATGCTGTCCCAGGAAGGGCTAGGGAC...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCTCTGACACCTCCCCCTaGGAGCAGCAGGAAAAGACA +
Preference number: 2 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRSDTSP*EQQEKT
Trigger: TGTCTTTTCCTGCTGCTCCCAGGGGGAGGTGTCAGA...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR GCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACTCTCCCAAGAAAATCTaGGAGTCTTGTCCACGTTCC +
Preference number: 2 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADSPKKI*ESCPRS
Trigger: GGAACGTGGACAAGACTCGCAGATTTTCTTGGGAGA...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACACCGGGCAGCAGGGTTaGAATTTCATCATTCCAAAG +
Preference number: 2 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADTGQQG*NFIIPK
Trigger: CTTTGGAATGATGAAATTCCAACCCTGCTGCCCGGT...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGACAGACTTCAGGGCTaGAGTGACTCTCCCAAGAAA +
Preference number: 2 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRDRLQG*SDSPKK
Trigger: TTTCTTGGGAGAGTCACTCCAGCCCTGAAGTCTGTC...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR CCA 72 bp GCGATGGGCCTCTGGCCTCAGCCACTACCCAGAGCCTaGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGC +
Preference number: 3 (lower is better)
Translates to: AMGLWPQPLPRA*LAALSVPPPLR
Trigger: GCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGGCTGAGGCCAGAGGCCCATCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR GCA 72 bp AGCCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTaGCCCCTCCTCTGCGCTCTGGGTGGGGCTAGCCCA +
Preference number: 3 (lower is better)
Translates to: SHYPEPGSQRCR*PLLCALGGASP
Trigger: TGGGCTAGCCCCACCCAGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR TCA 72 bp CCGCGCCCTAGCACAGTGGGGCAAGTGGGCCCACAGTaGACAGCCTGGCTCTGGTCCCGTCTGCCTCCCGAG +
Preference number: 3 (lower is better)
Translates to: PRPSTVGQVGPQ*TAWLWSRLPPE
Trigger: CTCGGGAGGCAGACGGGACCAGAGCCAGGCTGTTCACTGTGGGCCCACTTGCCCCACTGTGCTAGGGCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR GCA 72 bp GAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTaGGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTAT +
Preference number: 3 (lower is better)
Translates to: EPGSQRCRCPLL*ALGGASPGFLY
Trigger: ATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR CCA 72 bp GCCATCTCAGTTGGACAGGGGCAGGCGATGGGCCTCTaGCCTCAGCCACTACCCAGAGCCTGGCTCGCAGCG +
Preference number: 3 (lower is better)
Translates to: AISVGQGQAMGL*PQPLPRAWLAA
Trigger: CGCTGCGAGCCAGGCTCTGGGTAGTGGCTGAGGCCAGAGGCCCATCGCCTGCCCCTGTCCAACTGAGATGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CAA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCCAAGAGCACTTATTTaGAGTCGCCCGAGGCCCAGT +
Preference number: 3 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPPRALI*SRPRPS
Trigger: ACTGGGCCTCGGGCGACTCAAAATAAGTGCTCTTGG...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR TCA 72 bp ACAGCCTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTaGCACCTCCCCCTGGGAGCAGCAGGAAAAGACAGG +
Preference number: 3 (lower is better)
Translates to: TAWLWSRLPPEV*HLPLGAAGKDR
Trigger: CCTGTCTTTTCCTGCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAGGCTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CAA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGGACCGGGCAGCAGGGTaGGAATTTCATCATTCCAAA +
Preference number: 3 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGDRAAG*EFHHSK
Trigger: TTTGGAATGATGAAATTCCAACCCTGCTGCCCGGTC...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CAA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACGGAGTCAGGGAAGTCTaGGGAGCCAGAGTGGCTGCA +
Preference number: 3 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHGVREV*GARVAA
Trigger: TGCAGCCACTCTGGCTCCCAAGACTTCCCTGACTCC...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CAA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGTCATTTCCCAAGCCTTaGTCGAGGGCCCCTCTCTCC +
Preference number: 3 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLSFPKP*SRAPLS
Trigger: GGAGAGAGGGGCCCTCGACAAAGGCTTGGGAAATGA...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CAA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGGGAGTCAGGGAAGTCTaGGGAGCCAGAGTGGCTGCA +
Preference number: 3 (lower is better)
Translates to: THWQMYSLCPFGVPASWGGVREV*GARVAA
Trigger: TGCAGCCACTCTGGCTCCCAAGACTTCCCTGACTCC...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR TCA 72 bp TCCTGGGACAGCATCTGCTGTTCAAACCTAGGCTCCTaGAGGCCATCTCAGTTGGACAGGGGCAGGCGATGG +
Preference number: 3 (lower is better)
Translates to: SWDSICCSNLGS*RPSQLDRGRRW
Trigger: CCATCGCCTGCCCCTGTCCAACTGAGATGGCCTTCAGGAGCCTAGGTTTGAACAGCAGATGCTGTCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR-3UTR CAA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGGACCGGGCAGCAGGGTaGGAATTTCATCATTCCAAA +
Preference number: 3 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLDRAAG*EFHHSK
Trigger: TTTGGAATGATGAAATTCCAACCCTGCTGCCCGGTC...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR CCA 72 bp TCAACACCCTCCCTATCCCTGTGGGCAGTGGAAGACTaGGAGGTTGGTATTTCCCCTCTGAGTCACAGAGGA +
Preference number: 3 (lower is better)
Translates to: STPSLSLWAVED*EVGISPLSHRG
Trigger: TCCTCTGTGACTCAGAGGGGAAATACCAACCTCCCAGTCTTCCACTGCCCACAGGGATAGGGAGGGTGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR CCA 72 bp GGTCTCATGCAACATCAGGGTAGAGAAACCAGGGTCTaGCTAACCCAGCCAGAAGTCGAAGGCCAGGAGTTG +
Preference number: 3 (lower is better)
Translates to: GLMQHQGRETRV*LTQPEVEGQEL
Trigger: CAACTCCTGGCCTTCGACTTCTGGCTGGGTTAGCCAGACCCTGGTTTCTCTACCCTGATGTTGCATGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR CCA 72 bp GAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTaGGAGGGAGACACTGTTACCAGGTCTCATGCAACA +
Preference number: 3 (lower is better)
Translates to: EAQVSTEALARS*EGDTVTRSHAT
Trigger: TGTTGCATGAGACCTGGTAACAGTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR TCA 72 bp TCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTaGTCTGGCAGCGCGGCCAGGCAGACACCTTCCCAG +
Preference number: 3 (lower is better)
Translates to: SLPISGFLQKMY*SGSAARQTPSQ
Trigger: CTGGGAAGGTGTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR CCA 72 bp GCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTaGCAGCGCGGCCAGGCAGACACCTTCCCAGGACTC +
Preference number: 3 (lower is better)
Translates to: AHFRVFTKDVLI*QRGQADTFPGL
Trigger: GAGTCCTGGGAAGGTGTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
3UTR CCA 72 bp CTGAGTCACAGAGGAGCTAGAGACAGACTTCAGGGCTaGAGTGACTCTCCCAAGAAAATCTGCGAGTCTTGT +
Preference number: 3 (lower is better)
Translates to: LSHRGARDRLQG*SDSPKKICESC
Trigger: ACAAGACTCGCAGATTTTCTTGGGAGAGTCACTCCAGCCCTGAAGTCTGTCTCTAGCTCCTCTGTGACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCGTCGATCTCCCGGGATaGCGGCCGGCTGATGGGCGG +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPVDLPG*RPADGR
Trigger: CCGCCCATCAGCCGGCCGCCATCCCGGGAGATCGAC...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGGTCGATCTCCCGGGATaGCGGCCGGCTGATGGGCGG +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGVDLPG*RPADGR
Trigger: CCGCCCATCAGCCGGCCGCCATCCCGGGAGATCGAC...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGGCGGGGCGTGAACACTaGGGACCGGCTGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGAGREH*GPAGGP
Trigger: AGGGCCTCCAGCCGGTCCCCAGTGTTCACGCCCCGC...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000406606.7
CDS-3UTR TCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGGGAGCGGAGGGGCCCTaGGAAGCAAAGCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGGAEGP*EAKLRP
Trigger: GGGCCTCAGCTTTGCTTCTCAGGGCCCCTCCGCTCC...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371850.8
ENST00000371851.1
CDS-3UTR TCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCGGGCCCCCAGATCCCTaGCCCACATGCATCGGGCTC +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPGPPDP*PTCIGL
Trigger: GAGCCCGATGCATGTGGGTCAGGGATCTGGGGGCCC...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTCCGTCGCGCAGCGCCTaGGCCAGGTCGAAGACCACG +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSPSRSA*ARSKTT
Trigger: CGTGGTCTTCGACCTGGCGCAGGCGCTGCGCGACGG...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCCGGTGCCCCCTCCTCTaGGCTCTGGGTGGGGCTAGC +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSRCPLL*ALGGAS
Trigger: GCTAGCCCCACCCAGAGCGCAGAGGAGGGGGCACCG...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGGCCATCCTCCGCGCCTaGTGGGCCGCAGGTCGCAAA +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGAILRA*WAAGRK
Trigger: TTTGCGACCTGCGGCCCAGCAGGCGCGGAGGATGGC...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCGGCCACACCACCCGGTaGTTGGGCGGCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPGHTTR*LGGRTL
Trigger: CAAGGTCCTGCCGCCCAACCACCGGGTGGTGTGGCC...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCACCGGCTGGAGGCCCTaGAGGCCGAACGTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSTGWRP*RPNVPG
Trigger: CCCGGGAACGTTCGGCCTCCAGGGCCTCCAGCCGGT...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTACCGGCTGGAGGCCCTaGAGGCCGAACGTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSTGWRP*RPNVPG
Trigger: CCCGGGAACGTTCGGCCTCCAGGGCCTCCAGCCGGT...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCGACAGGGGCAGGCGATaGGCCTCTGGCCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPDRGRR*ASGLSH
Trigger: GTGGCTGAGGCCAGAGGCCCATCGCCTGCCCCTGTC...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTGGAGCGGAGGGGCCCTaGGAAGCAAAGCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSGAEGP*EAKLRP
Trigger: GGGCCTCAGCTTTGCTTCTCAGGGCCCCTCCGCTCC...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371850.8
ENST00000371851.1
CDS-3UTR TCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCGGGCCCCCAGATCCCTaGCCCACATGCATCGGGCTC +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSGPPDP*PTCIGL
Trigger: GAGCCCGATGCATGTGGGTCAGGGATCTGGGGGCCC...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTGGGCCCCCAGATCCCTaGCCCACATGCATCGGGCTC +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSGPPDP*PTCIGL
Trigger: GAGCCCGATGCATGTGGGTCAGGGATCTGGGGGCCC...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCGTGCTCGAGCCAAAGTaGAGCGGCCGCGGGGCATCC +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSVLEPK*SGRGAS
Trigger: GGATGCCCCGCGGCCGCTGCACTTTGGCTCGAGCAC...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371851.1
CDS-3UTR GCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGTCCTCCCCCAGGTCATaGTCGTCGGCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGSSPRS*SSASSS
Trigger: GGAGGAGCTGGCCGACGAGCATGACCTGGGGGAGGA...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTTCGCAGCGCTGTCGGTaGCCCCTCCTCTGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSSQRCR*PLLCAL
Trigger: CAGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGA...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGGGCTCTGGTCCCGTCTaGCTCCCGAGGTCTGACACC +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGGSGPV*LPRSDT
Trigger: GGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCC...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCACCATCTTGGGACCTaGTCCCGCTCCGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPHHLGT*SRSGGV
Trigger: GACGCCTCCGGAGCGGGACCAGGTCCCAAGATGGTG...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCGGACCTTGCAATCGATaGGCCAGCGGCCGCACTGCC +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSGPCNR*ASGRTA
Trigger: GGCAGTGCGGCCGCTGGCTCATCGATTGCAAGGTCC...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGCAAGTGGGCCCACAGTaGACAGCCTGGCTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGQVGPQ*TAWLWS
Trigger: GGACCAGAGCCAGGCTGTTCACTGTGGGCCCACTTG...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTTCCTCCCCCAGGTCATaGTCGTCGGCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSSSPRS*SSASSS
Trigger: GGAGGAGCTGGCCGACGAGCATGACCTGGGGGAGGA...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCTCCTCCCCCAGGTCATaGTCGTCGGCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSSSPRS*SSASSS
Trigger: GGAGGAGCTGGCCGACGAGCATGACCTGGGGGAGGA...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCCCTTGGCCAGCGTGCTaGCCCCCACCATCACGGACA +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSPWPAC*PPPSRT
Trigger: TGTCCGTGATGGTGGGGGGCAGCACGCTGGCCAAGG...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTAGAGGGCGACCACAGTaGTCTCTCCTCCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSRGRPQ*SLLPRP
Trigger: AGGGCGCGGGAGGAGAGAGCACTGTGGTCGCCCTCT...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCGGGAGCCAGAGTGGCTaGAGAGGGCGACCACAGTGC +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSGSQSG*RGRPQC
Trigger: GCACTGTGGTCGCCCTCTGCAGCCACTCTGGCTCCC...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTGGGAGCCAGAGTGGCTaGAGAGGGCGACCACAGTGC +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSGSQSG*RGRPQC
Trigger: GCACTGTGGTCGCCCTCTGCAGCCACTCTGGCTCCC...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTGCATGGCCACCATCTTaGGACCTGGTCCCGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSAWPPS*DLVPLR
Trigger: CCGGAGCGGGACCAGGTCCCAAGATGGTGGCCATGC...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTCCCTCCTCTGCGCTCTaGGTGGGGCTAGCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSPSSAL*VGLAQV
Trigger: AACCTGGGCTAGCCCCACCCAGAGCGCAGAGGAGGG...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTAGGAAACGGTACCGCTaGCCGGGCAGCAGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSRKRYR*PGSRVG
Trigger: TCCAACCCTGCTGCCCGGTCAGCGGTACCGTTTCCT...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGCACCCCGTCTCCTGCTaGAAACCATCGGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGHPVSC*KPSDSQ
Trigger: CTGGGAGTCCGATGGTTTTCAGCAGGAGACGGGGTG...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTACCGGCTCAGGGCAGTaGTCGAGCCAAAGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSTGSGQ*SSQSAA
Trigger: CGCTGCACTTTGGCTCGAGCACTGCCCTGAGCCGGT...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371851.1
CDS-3UTR GCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCATCGGACTCCCAGGCTaGACCCAGCCCTCCAACCCT +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSIGLPG*TQPSNP
Trigger: AGGGTTGGAGGGCTGGGTGCAGCCTGGGAGTCCGAT...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTATCGGACTCCCAGGCTaGACCCAGCCCTCCAACCCT +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSIGLPG*TQPSNP
Trigger: AGGGTTGGAGGGCTGGGTGCAGCCTGGGAGTCCGAT...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCAGCCAATCCGTCCGTTaGTCTCGCCCTTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPSQSVR*SRPSTS
Trigger: GCTGGTGGAAGGGCGAGACCAACGGACGGATTGGCT...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCTCTTGGGAGCCAGAGTaGCTGCAGAGGGCGACCACA +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPSWEPE*LQRATT
Trigger: TGTGGTCGCCCTCTGCAGCCACTCTGGCTCCCAAGA...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGCAGGTCGCAAAGTGCTaGGTGTACCCCGACACGGAG +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGQVAKC*VYPDTE
Trigger: CTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTG...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCTCTGTGGTCTCCTCTaGGGGAAAAGGCCTGATCCC +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPLCGLL*GKRPDP
Trigger: GGGATCAGGCCTTTTCCCTCAGAGGAGACCACAGAG...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCGCCCTCAGGAAGCTGTaGTGCACCTTGATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPALRKL*CTLIRS
Trigger: GGACCTGATCAAGGTGCATCACAGCTTCCTGAGGGC...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCAAAGACAGGCAAGGCTaGGTCCAGGGGCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPKDRQG*VQGLSR
Trigger: TCTGCTCAGCCCCTGGACTCAGCCTTGCCTGTCTTT...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTCACCCCGTCTCCTGCTaGAAACCATCGGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSHPVSC*KPSDSQ
Trigger: CTGGGAGTCCGATGGTTTTCAGCAGGAGACGGGGTG...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGCCAGCTCCTCCAGGCTaGGGTAGACGTCATCGTCAT +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGPAPPG*GRRHRH
Trigger: ATGACGATGACGTCTACCGCAGCCTGGAGGAGCTGG...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCCAGGCACTCCTTGTGTaGCCCGACGCCACACTTGGT +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSQALLV*PDATLG
Trigger: ACCAAGTGTGGCGTCGGGGCACACAAGGAGTGCCTG...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCCTGCCGTCACTGGATaGCCTCCTCTTCTACGTACG +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPPAVTG*PPLLRT
Trigger: CGTACGTAGAAGAGGAGGGCATCCAGTGACGGCAGG...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTAGCACGTCGCCCGTCTaGAAGGTCAGCACAGGCTTC +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSSTSPV*KVSTGF
Trigger: GAAGCCTGTGCTGACCTTCCAGACGGGCGACGTGCT...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCGTTCCTGCCGTCACTaGATGCCCTCCTCTTCTACG +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPRSCRH*MPSSST
Trigger: CGTAGAAGAGGAGGGCATCCAGTGACGGCAGGAACG...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCGAAGGCCATCTCAGTTaGACAGGGGCAGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSEGHLS*TGAGDG
Trigger: CCCATCGCCTGCCCCTGTCCAACTGAGATGGCCTTC...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTGAAGGCCAGGAGTTGTaGCTGGGGGAGGTAATGGGG +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSEGQEL*LGEVMG
Trigger: CCCCATTACCTCCCCCAGCCACAACTCCTGGCCTTC...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTCAGGTCGCAAAGTGCTaGGTGTACCCCGACACGGAG +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSQVAKC*VYPDTE
Trigger: CTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTG...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCAAACACAGGGGCTGCTaGCTTCCTCCCCGCCATCCT +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSKHRGC*LPPRHP
Trigger: AGGATGGCGGGGAGGAAGCCAGCAGCCCCTGTGTTT...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGTTTGTGTCCATTTaGGGTTCCCGCCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPQFVSI*GSRQLG
Trigger: CCCCAGCTGGCGGGAACCCCAAATGGACACAAACTG...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCAGAGCAGGTGGTATTTaGGCACCCTCTGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPRAGGI*APSAWG
Trigger: TCCCCATGCAGAGGGTGCTCAAATACCACCTGCTCT...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCAAAGACAGGCAAGGCTaGGTCCAGGGGCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSKDRQG*VQGLSR
Trigger: TCTGCTCAGCCCCTGGACTCAGCCTTGCCTGTCTTT...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTCTTTGTTCTGCGCGATaGTGTGCAGGGAGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSLCSAR*CAGRAS
Trigger: CGAGGCTCTCCCTGCACAGCATCGCGCAGAACAAAG...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCTGATCCCTTTGTTCTaGGCGATGCTGTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPLIPLF*AMLCRE
Trigger: CTCCCTGCACAGCATCGCGCAGAACAAAGGGATCAG...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTCAATGTCCTCCAGGGTaGGGTAGTACTTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSQCPPG*GSTWPR
Trigger: CCGAGGCCAAGTACTACCGCACCCTGGAGGACATTG...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCGTTAATGAAGACAGCTaGCATGTCCGCCGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPVNEDS*HVRRAQ
Trigger: CTGAGCCCGGCGGACATGGCAGCTGTCTTCATTAAC...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGCGTGCTCCATGTGGCTaGAGTACTCCCCGTAGATCA +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGRAPCG*STPRRS
Trigger: TGATCTACGGGGAGTACTGCAGCCACATGGAGCACG...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGAGTGTGTTCTGGGCGTaGTCCATGTGGCTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGSVFWA*SMWLQY
Trigger: GTACTGCAGCCACATGGAGCACGCCCAGAACACACT...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCAGTGTGTTCTGGGCGTaGTCCATGTGGCTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPSVFWA*SMWLQY
Trigger: GTACTGCAGCCACATGGAGCACGCCCAGAACACACT...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCCACTCCTCGACTTTCTaGCTGAAGTCCTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSHSSTF*LKSSRL
Trigger: CAGCCGGGAGGACTTCAGGCAGAAAGTCGAGGAGTG...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGTATTTGAGCACCCTCTaGATGGGGACCACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGYLSTL*MGTTSR
Trigger: CCTGCTGGTGGTCCCCATGCAGAGGGTGCTCAAATA...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTGCTTCTTTGAGCTGCTaGCTCTCAGGCCGTTCCGCA +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSASLSC*LSGRSA
Trigger: TGCGGAACGGCCTGAGAGGCAGCAGCTCAAAGAAGC...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCCGGGAGGGGCTGGGTTaGCATGGTAATTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSREGLG*HGNSAW
Trigger: CCATGCAGAATTACCATGGCAACCCAGCCCCTCCCG...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTTCTTGTCCACGTTCCTaGCGTCACTGGATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSSCPRS*RHWMPS
Trigger: GGAGGGCATCCAGTGACGGCAGGAACGTGGACAAGA...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCAGTAAACACAGGGGCTaGTGGCTTCCTCCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSSKHRG*WLPPRH
Trigger: ATGGCGGGGAGGAAGCCAGCAGCCCCTGTGTTTACT...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGTGGTTCAGTGTGTTCTaGGCGTGCTCCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGWFSVF*ACSMWL
Trigger: CAGCCACATGGAGCACGCCCAGAACACACTGAACCA...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCTCTGACACCTCCCCCTaGGAGCAGCAGGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPSDTSP*EQQEKT
Trigger: TGTCTTTTCCTGCTGCTCCCAGGGGGAGGTGTCAGA...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGGAGGGGCCTGCCGTGTaGGGTCCGGGTGTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLEGPAV*GPGVPL
Trigger: CAGGGGCACACCCGGACCCCACACGGCAGGCCCCTC...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCCTGCTTGGTGTGGTTaGCTATGGACCGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPPAWCG*LWTGLS
Trigger: TGAAAGTCCGGTCCATAGTCAACCACACCAAGCAGG...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGCCTGCTTGGTGTGGTTaGCTATGGACCGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGPAWCG*LWTGLS
Trigger: TGAAAGTCCGGTCCATAGTCAACCACACCAAGCAGG...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGGGGATGGCGGCCGGCTaGTGGGCGGCCTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLGMAAG*WAAFHP
Trigger: TGGATGGAAGGCCGCCCATCAGCCGGCCGCCATCCC...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGCGGCAGGCCGCTCCCTaGTCAGGTAGGTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLRQAAP*SGRSRW
Trigger: CCAGCGGGACCTACCTGATCAGGGAGCGGCCTGCCG...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCTGGTGTCCAGCTGCTTaGAGCTCTCCTTCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPWCPAA*SSPSVS
Trigger: ACTCACTGAAGGAGAGCTTCAAGCAGCTGGACACCA...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGTTACAAAAGATGTACTaGTCTGGCAGCGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGLQKMY*SGSAAR
Trigger: CCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAA...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACACACACGCAAGTGCCTaGGGGCCCCGGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHTHASA*GPRAGL
Trigger: GAGCCCGGCCCGGGGCCCGCAGGCACTTGCGTGTGT...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371851.1
CDS-3UTR GCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGCCGTCGCGCAGCGCCTaGGCCAGGTCGAAGACCACG +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLPSRSA*ARSKTT
Trigger: CGTGGTCTTCGACCTGGCGCAGGCGCTGCGCGACGG...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGAGAAACTGGGACATCTaGGGCCGGAAGTTGATGTCC +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGRNWDI*GRKLMS
Trigger: GGACATCAACTTCCGGCCGCAGATGTCCCAGTTTCT...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTCTGATCCCTTTGTTCTaGGCGATGCTGTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSLIPLF*AMLCRE
Trigger: CTCCCTGCACAGCATCGCGCAGAACAAAGGGATCAG...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCCGTGCTCCATGTGGCTaGAGTACTCCCCGTAGATCA +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSRAPCG*STPRRS
Trigger: TGATCTACGGGGAGTACTGCAGCCACATGGAGCACG...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTAGTGCTTCTTTGAGCTaGTGCCTCTCAGGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSSASLS*CLSGRS
Trigger: GGAACGGCCTGAGAGGCAGCAGCTCAAAGAAGCACT...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCTGCATGGCTTCCAGTaGTTCTTTGAGCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPLHGFQ*FFELLP
Trigger: AGGCAGCAGCTCAAAGAAGCACTGGAAGCCATGCAG...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGTGCAAACCAGGGGTATaGAGTGTAGTCGATCTCCCG +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGCKPGV*SVVDLP
Trigger: CGGGAGATCGACTACACTGCATACCCCTGGTTTGCA...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCTGCAAACCAGGGGTATaGAGTGTAGTCGATCTCCCG +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPCKPGV*SVVDLP
Trigger: CGGGAGATCGACTACACTGCATACCCCTGGTTTGCA...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGCGGTGCCCCCTCCTCTaGGCTCTGGGTGGGGCTAGC +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLRCPLL*ALGGAS
Trigger: GCTAGCCCCACCCAGAGCGCAGAGGAGGGGGCACCG...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGGCCCTCCAACCCTCCTaGCTTAGTGCAGTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGALQPS*LSAVQK
Trigger: TTTTTGCACTGCACTAAGGCAGGAGGGTTGGAGGGC...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTTGGTTCAGTGTGTTCTaGGCGTGCTCCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSWFSVF*ACSMWL
Trigger: CAGCCACATGGAGCACGCCCAGAACACACTGAACCA...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGCTGTCCTGCTTGGTGTaGTTGACTATGGACCGGACT +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGLSCLV*LTMDRT
Trigger: AGTCCGGTCCATAGTCAACCACACCAAGCAGGACAG...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTCCCCGACGCCACACTTaGTACACATGTATCCCTGGT +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSPRRHT*YTCIPG
Trigger: ACCAGGGATACATGTGTACCAAGTGTGGCGTCGGGG...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTGTCCCTAGCCCTTCCTaGGACAGCATCTGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSVPSPS*DSICCS
Trigger: TGAACAGCAGATGCTGTCCCAGGAAGGGCTAGGGAC...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTTCTGACACCTCCCCCTaGGAGCAGCAGGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSSDTSP*EQQEKT
Trigger: TGTCTTTTCCTGCTGCTCCCAGGGGGAGGTGTCAGA...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGGTCCGGGTGTGCCCCTaGCAAGGAGGGGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLVRVCP*QGGEWG
Trigger: CCCCCACTCCCCTCCTTGCCAGGGGCACACCCGGAC...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCAAAGATGTACTGATCTaGCAGCGCGGCCAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSKDVLI*QRGQAD
Trigger: GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTT...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTGCTTTGGCAAGGAGCTaGGAGGGAGACACTGTTACC +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSALARS*EGDTVT
Trigger: GGTAACAGTGTCTCCCTCCCAGCTCCTTGCCAAAGC...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTTCCGCTTGCAGACGATaGCCACCTTGTCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSSACRR*PPCQTG
Trigger: TCCTGTTTGACAAGGTGGTCATCGTCTGCAAGCGGA...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCTCCGCTTGCAGACGATaGCCACCTTGTCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSSACRR*PPCQTG
Trigger: TCCTGTTTGACAAGGTGGTCATCGTCTGCAAGCGGA...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCGTAGGACCACTTCTTaGCGTCCTTGTTGTTCATGG +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPRRTTS*RPCCSW
Trigger: CCATGAACAACAAGGACGTCAAGAAGTGGTCCTACG...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCGCTGGGGAAATACCCTaGCTTCCTGGTTTGTACCAG +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSAGEIP*LPGLYQ
Trigger: CTGGTACAAACCAGGAAGTCAGGGTATTTCCCCAGC...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCCTTCTCCACCACCTTaGTGTGCTTCACCTCATCAT +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPPSPPP*CASPHH
Trigger: ATGATGAGGTGAAGCACATCAAGGTGGTGGAGAAGG...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCGAAGCTCTCCTTCAGTaGGTGGCACTGGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSEALLQ*VALVVL
Trigger: GAGTACTACCAGTGCCACTCACTGAAGGAGAGCTTC...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTTGGTGTCCAGCTGCTTaGAGCTCTCCTTCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSWCPAA*SSPSVS
Trigger: ACTCACTGAAGGAGAGCTTCAAGCAGCTGGACACCA...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCACTTGTAGGGGTACTTaGGTGTGGTGTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSTCRGT*VWCPAA
Trigger: AGCAGCTGGACACCACACTCAAGTACCCCTACAAGT...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGCTCTTCTACGTACGTTaGAGGAAACCAGCCAATCCG +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGLFYVR*RKPANP
Trigger: CGGATTGGCTGGTTTCCTTCAACGTACGTAGAAGAG...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTTTACAAAAGATGTACTaGTCTGGCAGCGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSLQKMY*SGSAAR
Trigger: CCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAA...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCCAAGAGCACTTATTTTaGGTCGCCCGAGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSQEHLF*VARGPV
Trigger: AACTGGGCCTCGGGCGACTCAAAATAAGTGCTCTTG...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCAGAAACTGGGACATCTaGGGCCGGAAGTTGATGTCC +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSRNWDI*GRKLMS
Trigger: GGACATCAACTTCCGGCCGCAGATGTCCCAGTTTCT...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTCTGCATGGCTTCCAGTaGTTCTTTGAGCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSLHGFQ*FFELLP
Trigger: AGGCAGCAGCTCAAAGAAGCACTGGAAGCCATGCAG...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTAGGTTGTCCGTCTGCTaGCTCTCCATGTTACCTGCA +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSRLSVC*LSMLPA
Trigger: TGCAGGTAACATGGAGAGGCAGCAGACGGACAACCT...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCAGCAGGTTGTCCGTCTaGTGCCTCTCCATGTTACCT +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSSRLSV*CLSMLP
Trigger: AGGTAACATGGAGAGGCAGCAGACGGACAACCTGCT...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACCGGTGCCCCCTCCTCTaGGCTCTGGGTGGGGCTAGC +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHRCPLL*ALGGAS
Trigger: GCTAGCCCCACCCAGAGCGCAGAGGAGGGGGCACCG...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGTCGCAGCGCTGTCGGTaGCCCCTCCTCTGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLSQRCR*PLLCAL
Trigger: CAGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGA...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTTCCTGGGACAGCATCTaGTGTTCAAACCTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSSWDSI*CSNLGS
Trigger: GGAGCCTAGGTTTGAACAGCAGATGCTGTCCCAGGA...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCTCCTGGGACAGCATCTaGTGTTCAAACCTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSSWDSI*CSNLGS
Trigger: GGAGCCTAGGTTTGAACAGCAGATGCTGTCCCAGGA...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCTCATGCCCATTTTCATaGGCTGCTGCACCTCCACCT +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSSCPFS*AAAPPP
Trigger: AGGTGGAGGTGCAGCAGCCCATGAAAATGGGCATGA...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCTCCTTCAAGAGCAGGTaGTATTTGAGCACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPSFKSR*YLSTLC
Trigger: GCAGAGGGTGCTCAAATACCACCTGCTCTTGAAGGA...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGCGTCCTTGTTGTTCATaGGGTCGTCGGTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGRPCCS*GRRSSC
Trigger: ACAAGATGACCGACGACCCCATGAACAACAAGGACG...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGGGAAACTGTGGTGGTTaGCATTGGCTTTGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGGNCGG*HWLCLA
Trigger: AGCCAGACAAAGCCAATGCCAACCACCACAGTTTCC...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCGGAAACTGTGGTGGTTaGCATTGGCTTTGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPGNCGG*HWLCLA
Trigger: AGCCAGACAAAGCCAATGCCAACCACCACAGTTTCC...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCGCTTCACAGATGAGCTaGGGAAATACCCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPASQMS*GNTLTS
Trigger: GGAAGTCAGGGTATTTCCCCAGCTCATCTGTGAAGC...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGGACAGGGGCAGGCGATaGGCCTCTGGCCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLDRGRR*ASGLSH
Trigger: GTGGCTGAGGCCAGAGGCCCATCGCCTGCCCCTGTC...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGGAGGGGCCTGCCGTGTaGGGTCCGGGTGTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGEGPAV*GPGVPL
Trigger: CAGGGGCACACCCGGACCCCACACGGCAGGCCCCTC...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCAGAGAAACCAGGGTCTaGCTAACCCAGCCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSRETRV*LTQPEV
Trigger: GACTTCTGGCTGGGTTAGCCAGACCCTGGTTTCTCT...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGTCAGAAGCCTTTCCTTaGAATCGAGGAAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGSEAFP*NRGRPW
Trigger: CCAAGGTCTTCCTCGATTTCAAGGAAAGGCTTCTGA...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCGTCTGGCTTGATGTTTaGCATGGCCATCTCAAACTG +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPVWLDV*HGHLKL
Trigger: CAGTTTGAGATGGCCATGTCAAACATCAAGCCAGAC...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCTGGCTTTGTCTGGCTTaGTGTTTGACATGGCCATCT +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPWLCLA*CLTWPS
Trigger: AGATGGCCATGTCAAACATCAAGCCAGACAAAGCCA...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTGATCTGCAGGAGAAGTaGACTTGCAGGGAGGTATCA +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSDLQEK*TCREVS
Trigger: TGATACCTCCCTGCAAGTTCACTTCTCCTGCAGATC...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGCGGCAGGCCGCTCCCTaGTCAGGTAGGTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGRQAAP*SGRSRW
Trigger: CCAGCGGGACCTACCTGATCAGGGAGCGGCCTGCCG...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTACTTCAGGGCTGGAGTaGCTCTCCCAAGAAAATCTG +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSTSGLE*LSQENL
Trigger: CAGATTTTCTTGGGAGAGTCACTCCAGCCCTGAAGT...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCTTGGTATTTCCCCTCTaGGTCACAGAGGAGCTAGAG +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSLVFPL*VTEELE
Trigger: CTCTAGCTCCTCTGTGACTCAGAGGGGAAATACCAA...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATACCCGCTGCGCCGCCGTaGGTCCCCTCCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIPAAPP*VPSSSS
Trigger: GGAGGAAGAGGAGGGGACGCACGGCGGCGCAGCGGG...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371851.1
CDS-3UTR GCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCTCTCCCAAGAAAATCTaGGAGTCTTGTCCACGTTCC +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPSPKKI*ESCPRS
Trigger: GGAACGTGGACAAGACTCGCAGATTTTCTTGGGAGA...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTCGCAGCGCTGTCGGTaGCCCCTCCTCTGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGSQRCR*PLLCAL
Trigger: CAGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTCTAATCATGGGCTGCTaGACCTCCACCTTGATGATG +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSLIMGC*TSTLMM
Trigger: CATCATCAAGGTGGAGGTGCAGCAGCCCATGATTAG...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371850.8
CDS-3UTR CCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTTCGTCGGTCATCTTGTaGAACAGCAGCTCGATGATC +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSSSVIL*NSSSMI
Trigger: GATCATCGAGCTGCTGTTCCACAAGATGACCGACGA...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTCATGGTAATTCTGCATaGCCACCATCTTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSHGNSA*PPSWDL
Trigger: CAGGTCCCAAGATGGTGGCCATGCAGAATTACCATG...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGCCCTTCCACCAGCCCTaGTCTCCGCCGATGCGGCTG +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGPFHQP*SPPMRL
Trigger: CAGCCGCATCGGCGGAGACCAGGGCTGGTGGAAGGG...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACGACAGGGGCAGGCGATaGGCCTCTGGCCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHDRGRR*ASGLSH
Trigger: GTGGCTGAGGCCAGAGGCCCATCGCCTGCCCCTGTC...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCACCGGGCAGCAGGGTTaGAATTTCATCATTCCAAAG +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPTGQQG*NFIIPK
Trigger: CTTTGGAATGATGAAATTCCAACCCTGCTGCCCGGT...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGATCCTCCGCGCCTGCTaGGCCGCAGGTCGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLILRAC*AAGRKV
Trigger: CACTTTGCGACCTGCGGCCCAGCAGGCGCGGAGGAT...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGGCTGAGTCCAGGGGCTaGGCAGAGGGTGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGAESRG*AEGVGA
Trigger: TGCCCCCACACCCTCTGCTCAGCCCCTGGACTCAGC...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGCAAGTGGGCCCACAGTaGACAGCCTGGCTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLQVGPQ*TAWLWS
Trigger: GGACCAGAGCCAGGCTGTTCACTGTGGGCCCACTTG...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTATTTTCATGGGCTGCTaGACCTCCACCTTGATGATG +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSIFMGC*TSTLMM
Trigger: CATCATCAAGGTGGAGGTGCAGCAGCCCATGAAAAT...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCTGTCATCTTCAGTCATaGCCATTTTCATGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPCHLQS*PFSWAA
Trigger: AGCAGCCCATGAAAATGGGCATGACTGAAGATGACA...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACCCTTGGCCAGCGTGCTaGCCCCCACCATCACGGACA +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHPWPAC*PPPSRT
Trigger: TGTCCGTGATGGTGGGGGGCAGCACGCTGGCCAAGG...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGACCACCAGCAGGTCTTaGAGCTTAAATTTTCCATCC +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGTTSRS*SLNFPS
Trigger: GGATGGAAAATTTAAGCTGCAAGACCTGCTGGTGGT...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCTCTCCCAAGAAAATCTaGGAGTCTTGTCCACGTTCC +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSSPKKI*ESCPRS
Trigger: GGAACGTGGACAAGACTCGCAGATTTTCTTGGGAGA...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCCCTGTTTTCTTCCCTaGCCATTTCAGGGTTTTTAC +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPPCFLP*PFQGFY
Trigger: GTAAAAACCCTGAAATGGGCAGGGAAGAAAACAGGG...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCCTGCCTTAGTGCAGTaGAAAAACCAAACCAAACAC +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPPALVQ*KNQTKH
Trigger: GTGTTTGGTTTGGTTTTTGCACTGCACTAAGGCAGG...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGATCTGGAAACTGTGGTaGTTGGCATTGGCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGIWKLW*LALALS
Trigger: AGACAAAGCCAATGCCAACCACCACAGTTTCCAGAT...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCAGGCTTTGCAGTTGGTaGTCTTGTCAAACGTGTACA +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPRLCSW*SCQTCT
Trigger: TGTACACGTTTGACAAGACCACCAACTGCAAAGCCT...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGAGGCTTTGCAGTTGGTaGTCTTGTCAAACGTGTACA +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGRLCSW*SCQTCT
Trigger: TGTACACGTTTGACAAGACCACCAACTGCAAAGCCT...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGGCATGGCCACCATCTTaGGACCTGGTCCCGCTCCGG +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGAWPPS*DLVPLR
Trigger: CCGGAGCGGGACCAGGTCCCAAGATGGTGGCCATGC...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACGCATGGCCACCATCTTaGGACCTGGTCCCGCTCCGG +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHAWPPS*DLVPLR
Trigger: CCGGAGCGGGACCAGGTCCCAAGATGGTGGCCATGC...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAGTCGATCTCCCGGGATaGCGGCCGGCTGATGGGCGG +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIVDLPG*RPADGR
Trigger: CCGCCCATCAGCCGGCCGCCATCCCGGGAGATCGAC...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACCCCTCCTCTGCGCTCTaGGTGGGGCTAGCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHPSSAL*VGLAQV
Trigger: AACCTGGGCTAGCCCCACCCAGAGCGCAGAGGAGGG...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACCCACTACCCAGAGCCTaGCTCGCAGCGCTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHPLPRA*LAALSV
Trigger: CACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTACCGGGCAGCAGGGTTaGAATTTCATCATTCCAAAG +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSTGQQG*NFIIPK
Trigger: CTTTGGAATGATGAAATTCCAACCCTGCTGCCCGGT...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGCCTCGACTTTCTGCCTaGAGTCCTCCCGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGPRLSA*SPPGWP
Trigger: TGGCCAGCCGGGAGGACTTCAGGCAGAAAGTCGAGG...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGCGCTGGCGTGGGACTTaGGCAGGTTGTCCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGRWRGT*AGCPSA
Trigger: AGCAGACGGACAACCTGCTCAAGTCCCACGCCAGCG...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGTTCTGCGCGATGCTGTaGAGGGAGAGCCTCGACACC +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLFCAML*RESLDT
Trigger: GGTGTCGAGGCTCTCCCTGCACAGCATCGCGCAGAA...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGCCTTGGCCAGCGTGCTaGCCCCCACCATCACGGACA +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGPWPAC*PPPSRT
Trigger: TGTCCGTGATGGTGGGGGGCAGCACGCTGGCCAAGG...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCACATTTTGCAGGCTTTaGAGTTGGTGGTCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPTFCRL*SWWSCQ
Trigger: TTGACAAGACCACCAACTGCAAAGCCTGCAAAATGT...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGCAGGCACTCCTTGTGTaGCCCGACGCCACACTTGGT +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLQALLV*PDATLG
Trigger: ACCAAGTGTGGCGTCGGGGCACACAAGGAGTGCCTG...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGGGCTCTGGTCCCGTCTaGCTCCCGAGGTCTGACACC +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGGSGPV*LPRSDT
Trigger: GGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCC...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGTGTTACCAGGTCTCATaGAACATCAGGGTAGAGAAA +
Preference number: 4 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGCYQVS*NIRVEK
Trigger: TTTCTCTACCCTGATGTTGCATGAGACCTGGTAACA...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTCCTGCCTTAGTGCAGTaGAAAAACCAAACCAAACAC +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSPALVQ*KNQTKH
Trigger: GTGTTTGGTTTGGTTTTTGCACTGCACTAAGGCAGG...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGATCGGACTCCCAGGCTaGACCCAGCCCTCCAACCCT +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGIGLPG*TQPSNP
Trigger: AGGGTTGGAGGGCTGGGTGCAGCCTGGGAGTCCGAT...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAGGCCACACCACCCGGTaGTTGGGCGGCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIGHTTR*LGGRTL
Trigger: CAAGGTCCTGCCGCCCAACCACCGGGTGGTGTGGCC...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTATCTGGAAACTGTGGTaGTTGGCATTGGCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSIWKLW*LALALS
Trigger: AGACAAAGCCAATGCCAACCACCACAGTTTCCAGAT...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCTACATCTGGAAACTGTaGTGGTTGGCATTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSYIWKL*WLALAL
Trigger: CAAAGCCAATGCCAACCACCACAGTTTCCAGATGTA...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGCACCATCTTGGGACCTaGTCCCGCTCCGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGHHLGT*SRSGGV
Trigger: GACGCCTCCGGAGCGGGACCAGGTCCCAAGATGGTG...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGGGAAGCACAGGAAGCTaGGGACCGGCTGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGGSTGS*GPAGGP
Trigger: AGGGCCTCCAGCCGGTCCCCAGCTTCCTGTGCTTCC...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000371850.8
ENST00000371851.1
CDS-3UTR CCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATACCCTTCCACCAGCCCTaGTCTCCGCCGATGCGGCTG +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIPFHQP*SPPMRL
Trigger: CAGCCGCATCGGCGGAGACCAGGGCTGGTGGAAGGG...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAGGACCTTGCAATCGATaGGCCAGCGGCCGCACTGCC +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIGPCNR*ASGRTA
Trigger: GGCAGTGCGGCCGCTGGCTCATCGATTGCAAGGTCC...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGCCTCGACTTTCTGCCTaGAGTCCTCCCGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGPRLSA*SPPGWP
Trigger: TGGCCAGCCGGGAGGACTTCAGGCAGAAAGTCGAGG...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGCTTCCAGTGCTTCTTTaGGCTGCTGCCTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLLPVLL*AAASQA
Trigger: GGCCTGAGAGGCAGCAGCTCAAAGAAGCACTGGAAG...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGAGGAAACGGTACCGCTaGCCGGGCAGCAGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGRKRYR*PGSRVG
Trigger: TCCAACCCTGCTGCCCGGTCAGCGGTACCGTTTCCT...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGCACCCCGTCTCCTGCTaGAAACCATCGGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGHPVSC*KPSDSQ
Trigger: CTGGGAGTCCGATGGTTTTCAGCAGGAGACGGGGTG...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTTCTGCGCGATGCTGTaGAGGGAGAGCCTCGACACC +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGFCAML*RESLDT
Trigger: GGTGTCGAGGCTCTCCCTGCACAGCATCGCGCAGAA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGCAGGCACTCCTTGTGTaGCCCGACGCCACACTTGGT +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGQALLV*PDATLG
Trigger: ACCAAGTGTGGCGTCGGGGCACACAAGGAGTGCCTG...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGCGGGAGGGGCTGGGTTaGCATGGTAATTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLREGLG*HGNSAW
Trigger: CCATGCAGAATTACCATGGCAACCCAGCCCCTCCCG...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACCCTGGTCTCCGCCGATaGGGCTGTAGATCCTCACCA +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHPGLRR*GCRSSP
Trigger: TGGTGAGGATCTACAGCCGCATCGGCGGAGACCAGG...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCTTAAATTTTCCATCCTaGACCTTCAGTGTGCACTCC +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSLNFPS*TFSVHS
Trigger: GGAGTGCACACTGAAGGTCCAGGATGGAAAATTTAA...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATACACCATCTTGGGACCTaGTCCCGCTCCGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIHHLGT*SRSGGV
Trigger: GACGCCTCCGGAGCGGGACCAGGTCCCAAGATGGTG...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGCCAATCCGTCCGTTaGTCTCGCCCTTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGSQSVR*SRPSTS
Trigger: GCTGGTGGAAGGGCGAGACCAACGGACGGATTGGCT...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACGAAGGCCATCTCAGTTaGACAGGGGCAGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHEGHLS*TGAGDG
Trigger: CCCATCGCCTGCCCCTGTCCAACTGAGATGGCCTTC...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGCACAGGCTGTGCAGCTaGCCAGAGGGAGAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGHRLCS*PEGEGA
Trigger: AGCCCCTTCTCCCTCTGGCCAGCTGCACAGCCTGTG...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACCAGGTCGCAAAGTGCTaGGTGTACCCCGACACGGAG +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHQVAKC*VYPDTE
Trigger: CTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTG...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGCAGTTTGTGTCCATTTaGGGTTCCCGCCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLQFVSI*GSRQLG
Trigger: CCCCAGCTGGCGGGAACCCCAAATGGACACAAACTG...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACCTCTGTGGTCTCCTCTaGGGGAAAAGGCCTGATCCC +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHLCGLL*GKRPDP
Trigger: GGGATCAGGCCTTTTCCCTCAGAGGAGACCACAGAG...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGGCCCTCAGGAAGCTGTaGTGCACCTTGATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGALRKL*CTLIRS
Trigger: GGACCTGATCAAGGTGCATCACAGCTTCCTGAGGGC...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGCTTCCAGTGCTTCTTTaGGCTGCTGCCTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGLPVLL*AAASQA
Trigger: GGCCTGAGAGGCAGCAGCTCAAAGAAGCACTGGAAG...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACGCTGAGTCCAGGGGCTaGGCAGAGGGTGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADAESRG*AEGVGA
Trigger: TGCCCCCACACCCTCTGCTCAGCCCCTGGACTCAGC...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCAGACTTTCAGGAAGGTaGGTATGTTCTTCAAACACA +
Preference number: 4 (lower is better)
Translates to: LALVPSASRGLTPPPGSSRLSGR*VCSSNT
Trigger: TGTGTTTGAAGAACATACGCACCTTCCTGAAAGTCT...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGTTCTGCGCGATGCTGTaGAGGGAGAGCCTCGACACC +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGFCAML*RESLDT
Trigger: GGTGTCGAGGCTCTCCCTGCACAGCATCGCGCAGAA...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACCAATGTCCTCCAGGGTaGGGTAGTACTTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHQCPPG*GSTWPR
Trigger: CCGAGGCCAAGTACTACCGCACCCTGGAGGACATTG...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGAGTGTGTTCTGGGCGTaGTCCATGTGGCTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLSVFWA*SMWLQY
Trigger: GTACTGCAGCCACATGGAGCACGCCCAGAACACACT...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACCACTCCTCGACTTTCTaGCTGAAGTCCTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHHSSTF*LKSSRL
Trigger: CAGCCGGGAGGACTTCAGGCAGAAAGTCGAGGAGTG...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGCCTGCCGTCACTGGATaGCCTCCTCTTCTACGTACG +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGPAVTG*PPLLRT
Trigger: CGTACGTAGAAGAGGAGGGCATCCAGTGACGGCAGG...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATACCGCAGGTCGCAAAGTaGTGGGTGTACCCCGACACG +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIPQVAK*WVYPDT
Trigger: CGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGG...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACGCCATCCTCCGCGCCTaGTGGGCCGCAGGTCGCAAA +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADAILRA*WAAGRK
Trigger: TTTGCGACCTGCGGCCCAGCAGGCGCGGAGGATGGC...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACCTAATCTCAGGCCCCTaGAGTTTAGCCCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHLISGP*SLAPCR
Trigger: CCTGCAGGGGGCTAAACTGCAGGGGCCTGAGATTAG...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTAATCCAAATTTATCGTaGCAGACTTTCAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSNPNLS*QTFRKV
Trigger: CACCTTCCTGAAAGTCTGCCACGATAAATTTGGATT...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGTCACGGACACGTCGATaGCCCTCAGGAAGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLSRTRR*PSGSCD
Trigger: ATCACAGCTTCCTGAGGGCCATCGACGTGTCCGTGA...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGAGCACGTCGCCCGTCTaGAAGGTCAGCACAGGCTTC +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGSTSPV*KVSTGF
Trigger: GAAGCCTGTGCTGACCTTCCAGACGGGCGACGTGCT...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACCGTTCCTGCCGTCACTaGATGCCCTCCTCTTCTACG +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHRSCRH*MPSSST
Trigger: CGTAGAAGAGGAGGGCATCCAGTGACGGCAGGAACG...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGGAAGGCCAGGAGTTGTaGCTGGGGGAGGTAATGGGG +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGEGQEL*LGEVMG
Trigger: CCCCATTACCTCCCCCAGCCACAACTCCTGGCCTTC...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGGCTTTGGCAAGGAGCTaGGAGGGAGACACTGTTACC +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLALARS*EGDTVT
Trigger: GGTAACAGTGTCTCCCTCCCAGCTCCTTGCCAAAGC...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACGGACCTTGCAATCGATaGGCCAGCGGCCGCACTGCC +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADGPCNR*ASGRTA
Trigger: GGCAGTGCGGCCGCTGGCTCATCGATTGCAAGGTCC...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGGCTGGGGAAATACCCTaGCTTCCTGGTTTGTACCAG +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLAGEIP*LPGLYQ
Trigger: CTGGTACAAACCAGGAAGTCAGGGTATTTCCCCAGC...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGGATGGCGGCCGGCTaGTGGGCGGCCTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRGMAAG*WAAFHP
Trigger: TGGATGGAAGGCCGCCCATCAGCCGGCCGCCATCCC...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCGGCAGGCCGCTCCCTaGTCAGGTAGGTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRRQAAP*SGRSRW
Trigger: CCAGCGGGACCTACCTGATCAGGGAGCGGCCTGCCG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCAGCCAGCGGCCGCACTaGCGCCACTGCTCCATGGCG +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRSQRPH*RHCSMA
Trigger: CGCCATGGAGCAGTGGCGGCAGTGCGGCCGCTGGCT...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371850.8
ENST00000371851.1
CDS-3UTR GCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGCTTTGTTCTGCGCGATaGTGTGCAGGGAGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGLCSAR*CAGRAS
Trigger: CGAGGCTCTCCCTGCACAGCATCGCGCAGAACAAAG...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGCCAGCTCCTCCAGGCTaGGGTAGACGTCATCGTCAT +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGPAPPG*GRRHRH
Trigger: ATGACGATGACGTCTACCGCAGCCTGGAGGAGCTGG...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACCCTGGACCTTCAGTGTaGACTCCTCGACTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHPGPSV*TPRLSA
Trigger: GGCAGAAAGTCGAGGAGTGCACACTGAAGGTCCAGG...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGCCTGGACCTTCAGTGTaGACTCCTCGACTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGPGPSV*TPRLSA
Trigger: GGCAGAAAGTCGAGGAGTGCACACTGAAGGTCCAGG...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTATTTGAGCACCCTCTaGATGGGGACCACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGYLSTL*MGTTSR
Trigger: CCTGCTGGTGGTCCCCATGCAGAGGGTGCTCAAATA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACAGTGCTTCTTTGAGCTaGTGCCTCTCAGGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHSASLS*CLSGRS
Trigger: GGAACGGCCTGAGAGGCAGCAGCTCAAAGAAGCACT...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGCGGGAGGGGCTGGGTTaGCATGGTAATTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGREGLG*HGNSAW
Trigger: CCATGCAGAATTACCATGGCAACCCAGCCCCTCCCG...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGTCCTGGGACAGCATCTaGTGTTCAAACCTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLSWDSI*CSNLGS
Trigger: GGAGCCTAGGTTTGAACAGCAGATGCTGTCCCAGGA...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACGGCTCTGGTCCCGTCTaGCTCCCGAGGTCTGACACC +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADGSGPV*LPRSDT
Trigger: GGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCC...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGCTAATCTCAGGCCCCTaGAGTTTAGCCCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGLISGP*SLAPCR
Trigger: CCTGCAGGGGGCTAAACTGCAGGGGCCTGAGATTAG...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACGGCCGTTCCGCAGAATaGCTCAGAAGCTCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHGRSAE*LRSSFK
Trigger: CTTGAAGGAGCTTCTGAGCCATTCTGCGGAACGGCC...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACCCCCGACGCCACACTTaGTACACATGTATCCCTGGT +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHPRRHT*YTCIPG
Trigger: ACCAGGGATACATGTGTACCAAGTGTGGCGTCGGGG...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAAGCACGTCGCCCGTCTaGAAGGTCAGCACAGGCTTC +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSISTSPV*KVSTGF
Trigger: GAAGCCTGTGCTGACCTTCCAGACGGGCGACGTGCT...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGTGGGCAGTGGAAGACTaGGAGGTTGGTATTTCCCCT +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLWAVED*EVGISP
Trigger: AGGGGAAATACCAACCTCCCAGTCTTCCACTGCCCA...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAGAAGGCCATCTCAGTTaGACAGGGGCAGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIEGHLS*TGAGDG
Trigger: CCCATCGCCTGCCCCTGTCCAACTGAGATGGCCTTC...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACGTCCCTAGCCCTTCCTaGGACAGCATCTGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHVPSPS*DSICCS
Trigger: TGAACAGCAGATGCTGTCCCAGGAAGGGCTAGGGAC...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACTCTGACACCTCCCCCTaGGAGCAGCAGGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHSDTSP*EQQEKT
Trigger: TGTCTTTTCCTGCTGCTCCCAGGGGGAGGTGTCAGA...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATATCTTGGGAGCCAGAGTaGCTGCAGAGGGCGACCACA +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSISWEPE*LQRATT
Trigger: TGTGGTCGCCCTCTGCAGCCACTCTGGCTCCCAAGA...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACATCCTCCGCGCCTGCTaGGCCGCAGGTCGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADILRAC*AAGRKV
Trigger: CACTTTGCGACCTGCGGCCCAGCAGGCGCGGAGGAT...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGAGAGCAGGTGGTATTTaGGCACCCTCTGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGRAGGI*APSAWG
Trigger: TCCCCATGCAGAGGGTGCTCAAATACCACCTGCTCT...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATACTTCCAGTGCTTCTTTaGGCTGCTGCCTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSILPVLL*AAASQA
Trigger: GGCCTGAGAGGCAGCAGCTCAAAGAAGCACTGGAAG...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTCCGCTTGCAGACGATaGCCACCTTGTCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGSACRR*PPCQTG
Trigger: TCCTGTTTGACAAGGTGGTCATCGTCTGCAAGCGGA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACCGCTGGCGTGGGACTTaGGCAGGTTGTCCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADRWRGT*AGCPSA
Trigger: AGCAGACGGACAACCTGCTCAAGTCCCACGCCAGCG...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGCCTTCTCCACCACCTTaGTGTGCTTCACCTCATCAT +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLPSPPP*CASPHH
Trigger: ATGATGAGGTGAAGCACATCAAGGTGGTGGAGAAGG...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGGAAGCTCTCCTTCAGTaGGTGGCACTGGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGEALLQ*VALVVL
Trigger: GAGTACTACCAGTGCCACTCACTGAAGGAGAGCTTC...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGTTGGTATTTCCCCTCTaGGTCACAGAGGAGCTAGAG +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLLVFPL*VTEELE
Trigger: CTCTAGCTCCTCTGTGACTCAGAGGGGAAATACCAA...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGCTGAGTCCAGGGGCTaGGCAGAGGGTGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRAESRG*AEGVGA
Trigger: TGCCCCCACACCCTCTGCTCAGCCCCTGGACTCAGC...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACAGGAAACGGTACCGCTaGCCGGGCAGCAGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADRKRYR*PGSRVG
Trigger: TCCAACCCTGCTGCCCGGTCAGCGGTACCGTTTCCT...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGCAAGAGCACTTATTTTaGGTCGCCCGAGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGQEHLF*VARGPV
Trigger: AACTGGGCCTCGGGCGACTCAAAATAAGTGCTCTTG...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATACTTTGTTCTGCGCGATaGTGTGCAGGGAGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSILCSAR*CAGRAS
Trigger: CGAGGCTCTCCCTGCACAGCATCGCGCAGAACAAAG...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACCCCATTTTCATGGGCTaGTGCACCTCCACCTTGATG +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHPIFMG*CTSTLM
Trigger: CATCAAGGTGGAGGTGCAGCAGCCCATGAAAATGGG...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAGCTTCTTTGAGCTGCTaGCTCTCAGGCCGTTCCGCA +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIASLSC*LSGRSA
Trigger: TGCGGAACGGCCTGAGAGGCAGCAGCTCAAAGAAGC...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGAGTGCTTCTTTGAGCTaGTGCCTCTCAGGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGSASLS*CLSGRS
Trigger: GGAACGGCCTGAGAGGCAGCAGCTCAAAGAAGCACT...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATATCTTGTCCACGTTCCTaGCGTCACTGGATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSISCPRS*RHWMPS
Trigger: GGAGGGCATCCAGTGACGGCAGGAACGTGGACAAGA...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACCCGCAGGTCGCAAAGTaGTGGGTGTACCCCGACACG +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADPQVAK*WVYPDT
Trigger: CGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGG...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAAGTAAACACAGGGGCTaGTGGCTTCCTCCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSISKHRG*WLPPRH
Trigger: ATGGCGGGGAGGAAGCCAGCAGCCCCTGTGTTTACT...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACGCCCTCCAACCCTCCTaGCTTAGTGCAGTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHALQPS*LSAVQK
Trigger: TTTTTGCACTGCACTAAGGCAGGAGGGTTGGAGGGC...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCACACCACCCGGTaGTTGGGCGGCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRGHTTR*LGGRTL
Trigger: CAAGGTCCTGCCGCCCAACCACCGGGTGGTGTGGCC...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGTTCAAACACAGAAACTaGGACATCTGCGGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLFKHRN*DICGRK
Trigger: CTTCCGGCCGCAGATGTCCCAGTTTCTGTGTTTGAA...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACTCATGCCCATTTTCATaGGCTGCTGCACCTCCACCT +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHSCPFS*AAAPPP
Trigger: AGGTGGAGGTGCAGCAGCCCATGAAAATGGGCATGA...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGCTGTCCTGCTTGGTGTaGTTGACTATGGACCGGACT +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGLSCLV*LTMDRT
Trigger: AGTCCGGTCCATAGTCAACCACACCAAGCAGGACAG...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGGGAAGACTGGGAGGTTaGTATTTCCCCTCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLGRLGG*YFPSES
Trigger: TGACTCAGAGGGGAAATACCAACCTCCCAGTCTTCC...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACCAGGCGATGGGCCTCTaGCCTCAGCCACTACCCAGA +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADQAMGL*PQPLPR
Trigger: TCTGGGTAGTGGCTGAGGCCAGAGGCCCATCGCCTG...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGAGAAACCAGGGTCTaGCTAACCCAGCCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGRETRV*LTQPEV
Trigger: GACTTCTGGCTGGGTTAGCCAGACCCTGGTTTCTCT...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACAGAGAAACCAGGGTCTaGCTAACCCAGCCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHRETRV*LTQPEV
Trigger: GACTTCTGGCTGGGTTAGCCAGACCCTGGTTTCTCT...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACCACAGGCTGTGCAGCTaGCCAGAGGGAGAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADHRLCS*PEGEGA
Trigger: AGCCCCTTCTCCCTCTGGCCAGCTGCACAGCCTGTG...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGTCAGAAGCCTTTCCTTaGAATCGAGGAAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLSEAFP*NRGRPW
Trigger: CCAAGGTCTTCCTCGATTTCAAGGAAAGGCTTCTGA...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGGTCTGGCTTGATGTTTaGCATGGCCATCTCAAACTG +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLVWLDV*HGHLKL
Trigger: CAGTTTGAGATGGCCATGTCAAACATCAAGCCAGAC...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGTGGCTTTGTCTGGCTTaGTGTTTGACATGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLWLCLA*CLTWPS
Trigger: AGATGGCCATGTCAAACATCAAGCCAGACAAAGCCA...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACGATCTGCAGGAGAAGTaGACTTGCAGGGAGGTATCA +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHDLQEK*TCREVS
Trigger: TGATACCTCCCTGCAAGTTCACTTCTCCTGCAGATC...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGACTTCAGGGCTGGAGTaGCTCTCCCAAGAAAATCTG +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGTSGLE*LSQENL
Trigger: CAGATTTTCTTGGGAGAGTCACTCCAGCCCTGAAGT...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGTCAAACCTAGGCTCCTaGAGGCCATCTCAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGSNLGS*RPSQLD
Trigger: GTCCAACTGAGATGGCCTTCAGGAGCCTAGGTTTGA...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGTTACAAAAGATGTACTaGTCTGGCAGCGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGLQKMY*SGSAAR
Trigger: CCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAA...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACCCTCTCCATGTTACCTaGAAACCAGGGGTATGCAGT +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHPLHVT*KPGVCS
Trigger: ACTGCATACCCCTGGTTTGCAGGTAACATGGAGAGG...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGCCTCTCCATGTTACCTaGAAACCAGGGGTATGCAGT +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGPLHVT*KPGVCS
Trigger: ACTGCATACCCCTGGTTTGCAGGTAACATGGAGAGG...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGAGGTTGTCCGTCTGCTaGCTCTCCATGTTACCTGCA +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGRLSVC*LSMLPA
Trigger: TGCAGGTAACATGGAGAGGCAGCAGACGGACAACCT...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGAGCAGGTTGTCCGTCTaGTGCCTCTCCATGTTACCT +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGSRLSV*CLSMLP
Trigger: AGGTAACATGGAGAGGCAGCAGACGGACAACCTGCT...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGTGTGGTGTCCAGCTaGTTGAAGCTCTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGSVVSS*LKLSFS
Trigger: ACTGAAGGAGAGCTTCAAGCAGCTGGACACCACACT...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCAGAGGGCGACCACAGTaGTCTCTCCTCCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRRGRPQ*SLLPRP
Trigger: AGGGCGCGGGAGGAGAGAGCACTGTGGTCGCCCTCT...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGGCCCTCCAACCCTCCTaGCTTAGTGCAGTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGALQPS*LSAVQK
Trigger: TTTTTGCACTGCACTAAGGCAGGAGGGTTGGAGGGC...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATATCACGGACACGTCGATaGCCCTCAGGAAGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSISRTRR*PSGSCD
Trigger: ATCACAGCTTCCTGAGGGCCATCGACGTGTCCGTGA...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAGGCCGTTCCGCAGAATaGCTCAGAAGCTCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIGRSAE*LRSSFK
Trigger: CTTGAAGGAGCTTCTGAGCCATTCTGCGGAACGGCC...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACCATGGTAATTCTGCATaGCCACCATCTTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHHGNSA*PPSWDL
Trigger: CAGGTCCCAAGATGGTGGCCATGCAGAATTACCATG...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGAATACCCTGACTTCCTaGTTTGTACCAGACGACCCT +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLNTLTS*FVPDDP
Trigger: AGGGTCGTCTGGTACAAACCAGGAAGTCAGGGTATT...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGGGAAGACTGGGAGGTTaGTATTTCCCCTCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGGRLGG*YFPSES
Trigger: TGACTCAGAGGGGAAATACCAACCTCCCAGTCTTCC...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGTGGGCAGTGGAAGACTaGGAGGTTGGTATTTCCCCT +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGWAVED*EVGISP
Trigger: AGGGGAAATACCAACCTCCCAGTCTTCCACTGCCCA...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAAAAGATGTACTGATCTaGCAGCGCGGCCAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIKDVLI*QRGQAD
Trigger: GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTT...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAGCTTTGGCAAGGAGCTaGGAGGGAGACACTGTTACC +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIALARS*EGDTVT
Trigger: GGTAACAGTGTCTCCCTCCCAGCTCCTTGCCAAAGC...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACAAACACAGGGGCTGCTaGCTTCCTCCCCGCCATCCT +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADKHRGC*LPPRHP
Trigger: AGGATGGCGGGGAGGAAGCCAGCAGCCCCTGTGTTT...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAGCTGGGGAAATACCCTaGCTTCCTGGTTTGTACCAG +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIAGEIP*LPGLYQ
Trigger: CTGGTACAAACCAGGAAGTCAGGGTATTTCCCCAGC...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCGCTGGCGTGGGACTTaGGCAGGTTGTCCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRRWRGT*AGCPSA
Trigger: AGCAGACGGACAACCTGCTCAAGTCCCACGCCAGCG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACATTTCTTGGCCTCTGTaGTGTGGATCCAGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHISWPL*CGSSCP
Trigger: AGGACAACTGGATCCACATCACAGAGGCCAAGAAAT...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAACTTGTAGGGGTACTTaGGTGTGGTGTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSITCRGT*VWCPAA
Trigger: AGCAGCTGGACACCACACTCAAGTACCCCTACAAGT...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCAAGTGGGCCCACAGTaGACAGCCTGGCTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRQVGPQ*TAWLWS
Trigger: GGACCAGAGCCAGGCTGTTCACTGTGGGCCCACTTG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACCCAGCTCCTCCAGGCTaGGGTAGACGTCATCGTCAT +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADPAPPG*GRRHRH
Trigger: ATGACGATGACGTCTACCGCAGCCTGGAGGAGCTGG...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACCACTCCTCGACTTTCTaGCTGAAGTCCTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADHSSTF*LKSSRL
Trigger: CAGCCGGGAGGACTTCAGGCAGAAAGTCGAGGAGTG...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACGCTTCTTTGAGCTGCTaGCTCTCAGGCCGTTCCGCA +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADASLSC*LSGRSA
Trigger: TGCGGAACGGCCTGAGAGGCAGCAGCTCAAAGAAGC...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCCGCAGGTCGCAAAGTaGTGGGTGTACCCCGACACG +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRPQVAK*WVYPDT
Trigger: CGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACCTAATCTCAGGCCCCTaGAGTTTAGCCCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADLISGP*SLAPCR
Trigger: CCTGCAGGGGGCTAAACTGCAGGGGCCTGAGATTAG...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGTCCTTCAAGAGCAGGTaGTATTTGAGCACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGSFKSR*YLSTLC
Trigger: GCAGAGGGTGCTCAAATACCACCTGCTCTTGAAGGA...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGTCAAACGTGTACATCTaGAAACTGTGGTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLSNVYI*KLWWLA
Trigger: TGCCAACCACCACAGTTTCCAGATGTACACGTTTGA...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTGCAGGCTTTGCAGTTaGTGGTCTTGTCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGCRLCS*WSCQTC
Trigger: ACACGTTTGACAAGACCACCAACTGCAAAGCCTGCA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGCATGGTAATTCTGCATaGCCACCATCTTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGHGNSA*PPSWDL
Trigger: CAGGTCCCAAGATGGTGGCCATGCAGAATTACCATG...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACAATACCCTGACTTCCTaGTTTGTACCAGACGACCCT +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHNTLTS*FVPDDP
Trigger: AGGGTCGTCTGGTACAAACCAGGAAGTCAGGGTATT...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACCGTTCCTGCCGTCACTaGATGCCCTCCTCTTCTACG +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADRSCRH*MPSSST
Trigger: CGTAGAAGAGGAGGGCATCCAGTGACGGCAGGAACG...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCAGGCGATGGGCCTCTaGCCTCAGCCACTACCCAGA +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRQAMGL*PQPLPR
Trigger: TCTGGGTAGTGGCTGAGGCCAGAGGCCCATCGCCTG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACACCGGGCAGCAGGGTTaGAATTTCATCATTCCAAAG +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHTGQQG*NFIIPK
Trigger: CTTTGGAATGATGAAATTCCAACCCTGCTGCCCGGT...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCAGCCCTGCCAGGGGCTaGAACCAACCTCTCGTGCCA +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRSPARG*NQPLVP
Trigger: TGGCACGAGAGGTTGGTTCCAGCCCCTGGCAGGGCT...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGTCAGAAGCCTTTCCTTaGAATCGAGGAAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGSEAFP*NRGRPW
Trigger: CCAAGGTCTTCCTCGATTTCAAGGAAAGGCTTCTGA...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATACGTAGGACCACTTCTTaGCGTCCTTGTTGTTCATGG +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIRRTTS*RPCCSW
Trigger: CCATGAACAACAAGGACGTCAAGAAGTGGTCCTACG...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAGATCTGCAGGAGAAGTaGACTTGCAGGGAGGTATCA +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIDLQEK*TCREVS
Trigger: TGATACCTCCCTGCAAGTTCACTTCTCCTGCAGATC...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGATTTCTTGGCCTCTGTaGTGTGGATCCAGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGISWPL*CGSSCP
Trigger: AGGACAACTGGATCCACATCACAGAGGCCAAGAAAT...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACGTTAATGAAGACAGCTaGCATGTCCGCCGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADVNEDS*HVRRAQ
Trigger: CTGAGCCCGGCGGACATGGCAGCTGTCTTCATTAAC...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGACCACCAGCAGGTCTTaGAGCTTAAATTTTCCATCC +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGTTSRS*SLNFPS
Trigger: GGATGGAAAATTTAAGCTGCAAGACCTGCTGGTGGT...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAACAAGTACCTGTCCTaGTTGGTGTGGTTGACTATG +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGNKYLS*LVWLTM
Trigger: CATAGTCAACCACACCAAGCAGGACAGGTACTTGTT...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCCTGGTCTCCGCCGATaGGGCTGTAGATCCTCACCA +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRPGLRR*GCRSSP
Trigger: TGGTGAGGATCTACAGCCGCATCGGCGGAGACCAGG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATATTCAAACACAGAAACTaGGACATCTGCGGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIFKHRN*DICGRK
Trigger: CTTCCGGCCGCAGATGTCCCAGTTTCTGTGTTTGAA...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACTCACGGACACGTCGATaGCCCTCAGGAAGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADSRTRR*PSGSCD
Trigger: ATCACAGCTTCCTGAGGGCCATCGACGTGTCCGTGA...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATATCGTCGGTCATCTTGTaGAACAGCAGCTCGATGATC +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSISSVIL*NSSSMI
Trigger: GATCATCGAGCTGCTGTTCCACAAGATGACCGACGA...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATACGTCCTTGTTGTTCATaGGGTCGTCGGTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIRPCCS*GRRSSC
Trigger: ACAAGATGACCGACGACCCCATGAACAACAAGGACG...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTACATCTGGAAACTGTaGTGGTTGGCATTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGYIWKL*WLALAL
Trigger: CAAAGCCAATGCCAACCACCACAGTTTCCAGATGTA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGCTTTGCAGTTGGTaGTCTTGTCAAACGTGTACA +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGRLCSW*SCQTCT
Trigger: TGTACACGTTTGACAAGACCACCAACTGCAAAGCCT...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACCCCCGACGCCACACTTaGTACACATGTATCCCTGGT +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADPRRHT*YTCIPG
Trigger: ACCAGGGATACATGTGTACCAAGTGTGGCGTCGGGG...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAGCTTCACAGATGAGCTaGGGAAATACCCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIASQMS*GNTLTS
Trigger: GGAAGTCAGGGTATTTCCCCAGCTCATCTGTGAAGC...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCAGCCAATCCGTCCGTTaGTCTCGCCCTTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRSQSVR*SRPSTS
Trigger: GCTGGTGGAAGGGCGAGACCAACGGACGGATTGGCT...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGAAGGCCAGGAGTTGTaGCTGGGGGAGGTAATGGGG +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQREGQEL*LGEVMG
Trigger: CCCCATTACCTCCCCCAGCCACAACTCCTGGCCTTC...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCAAACACAGGGGCTGCTaGCTTCCTCCCCGCCATCCT +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRKHRGC*LPPRHP
Trigger: AGGATGGCGGGGAGGAAGCCAGCAGCCCCTGTGTTT...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATATGGCTTTGTCTGGCTTaGTGTTTGACATGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIWLCLA*CLTWPS
Trigger: AGATGGCCATGTCAAACATCAAGCCAGACAAAGCCA...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACGAAGCTCTCCTTCAGTaGGTGGCACTGGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADEALLQ*VALVVL
Trigger: GAGTACTACCAGTGCCACTCACTGAAGGAGAGCTTC...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACTCAAACCTAGGCTCCTaGAGGCCATCTCAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADSNLGS*RPSQLD
Trigger: GTCCAACTGAGATGGCCTTCAGGAGCCTAGGTTTGA...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGAGACTTTCAGGAAGGTaGGTATGTTCTTCAAACACA +
Preference number: 4 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLRLSGR*VCSSNT
Trigger: TGTGTTTGAAGAACATACGCACCTTCCTGAAAGTCT...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGTGTCATCTTCAGTCATaGCCATTTTCATGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGCHLQS*PFSWAA
Trigger: AGCAGCCCATGAAAATGGGCATGACTGAAGATGACA...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCAATGTCCTCCAGGGTaGGGTAGTACTTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRQCPPG*GSTWPR
Trigger: CCGAGGCCAAGTACTACCGCACCCTGGAGGACATTG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACTGCAAACCAGGGGTATaGAGTGTAGTCGATCTCCCG +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADCKPGV*SVVDLP
Trigger: CGGGAGATCGACTACACTGCATACCCCTGGTTTGCA...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCCTGCCGTCACTGGATaGCCTCCTCTTCTACGTACG +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRPAVTG*PPLLRT
Trigger: CGTACGTAGAAGAGGAGGGCATCCAGTGACGGCAGG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCTCTTGTCCACGTTCCTaGCGTCACTGGATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRSCPRS*RHWMPS
Trigger: GGAGGGCATCCAGTGACGGCAGGAACGTGGACAAGA...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGGTCATGCCCATTTTCTaGATGTATCTAATCATGGGC +
Preference number: 4 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGVMPIF*MYLIMG
Trigger: GCCCATGATTAGATACATGCAGAAAATGGGCATGAC...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371850.8
CDS-3UTR CCA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACTTAAATTTTCCATCCTaGACCTTCAGTGTGCACTCC +
Preference number: 4 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHLNFPS*TFSVHS
Trigger: GGAGTGCACACTGAAGGTCCAGGATGGAAAATTTAA...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAAATACCCTGACTTCCTaGTTTGTACCAGACGACCCT +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSINTLTS*FVPDDP
Trigger: AGGGTCGTCTGGTACAAACCAGGAAGTCAGGGTATT...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACTCCCGTGAGACTTCTTaGCGTCCTTGTTGTTCATGG +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADSRETS*RPCCSW
Trigger: CCATGAACAACAAGGACGTCAAGAAGTCTCACGGGA...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371850.8
CDS-3UTR GCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCTGATCCCTTTGTTCTaGGCGATGCTGTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRLIPLF*AMLCRE
Trigger: CTCCCTGCACAGCATCGCGCAGAACAAAGGGATCAG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCGTGCTCCATGTGGCTaGAGTACTCCCCGTAGATCA +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRRAPCG*STPRRS
Trigger: TGATCTACGGGGAGTACTGCAGCCACATGGAGCACG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCCTGGACCTTCAGTGTaGACTCCTCGACTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRPGPSV*TPRLSA
Trigger: GGCAGAAAGTCGAGGAGTGCACACTGAAGGTCCAGG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAACCACCAGCAGGTCTTaGAGCTTAAATTTTCCATCC +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSITTSRS*SLNFPS
Trigger: GGATGGAAAATTTAAGCTGCAAGACCTGCTGGTGGT...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCTATTTGAGCACCCTCTaGATGGGGACCACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRYLSTL*MGTTSR
Trigger: CCTGCTGGTGGTCCCCATGCAGAGGGTGCTCAAATA...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAAACAAGTACCTGTCCTaGTTGGTGTGGTTGACTATG +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSINKYLS*LVWLTM
Trigger: CATAGTCAACCACACCAAGCAGGACAGGTACTTGTT...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACAGTGTGGTGTCCAGCTaGTTGAAGCTCTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADSVVSS*LKLSFS
Trigger: ACTGAAGGAGAGCTTCAAGCAGCTGGACACCACACT...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATACCCTGTTTTCTTCCCTaGCCATTTCAGGGTTTTTAC +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIPCFLP*PFQGFY
Trigger: GTAAAAACCCTGAAATGGGCAGGGAAGAAAACAGGG...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGTTAAATTTTCCATCCTaGACCTTCAGTGTGCACTCC +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGLNFPS*TFSVHS
Trigger: GGAGTGCACACTGAAGGTCCAGGATGGAAAATTTAA...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCGTTCCGCAGAATaGCTCAGAAGCTCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRGRSAE*LRSSFK
Trigger: CTTGAAGGAGCTTCTGAGCCATTCTGCGGAACGGCC...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACCGTCCTTGTTGTTCATaGGGTCGTCGGTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADRPCCS*GRRSSC
Trigger: ACAAGATGACCGACGACCCCATGAACAACAAGGACG...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATATCAAACGTGTACATCTaGAAACTGTGGTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSISNVYI*KLWWLA
Trigger: TGCCAACCACCACAGTTTCCAGATGTACACGTTTGA...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACGACAGACTTCAGGGCTaGAGTGACTCTCCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADDRLQG*SDSPKK
Trigger: TTTCTTGGGAGAGTCACTCCAGCCCTGAAGTCTGTC...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCCTGCTTGGTGTGGTTaGCTATGGACCGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRPAWCG*LWTGLS
Trigger: TGAAAGTCCGGTCCATAGTCAACCACACCAAGCAGG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACATTTCTTGGCCTCTGTaGTGTGGATCCAGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADISWPL*CGSSCP
Trigger: AGGACAACTGGATCCACATCACAGAGGCCAAGAAAT...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCACTTGTAGGGGTACTTaGGTGTGGTGTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRTCRGT*VWCPAA
Trigger: AGCAGCTGGACACCACACTCAAGTACCCCTACAAGT...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCAGCAGGTTGTCCGTCTaGTGCCTCTCCATGTTACCT +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRSRLSV*CLSMLP
Trigger: AGGTAACATGGAGAGGCAGCAGACGGACAACCTGCT...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATATGTTACCAGGTCTCATaGAACATCAGGGTAGAGAAA +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSICYQVS*NIRVEK
Trigger: TTTCTCTACCCTGATGTTGCATGAGACCTGGTAACA...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACTATCTAATCATGGGCTaGTGCACCTCCACCTTGATG +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADYLIMG*CTSTLM
Trigger: CATCAAGGTGGAGGTGCAGCAGCCCATGATTAGATA...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371850.8
CDS-3UTR CCA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGAATCCAAATTTATCGTaGCAGACTTTCAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: THWQMYSLCPFGVPASWGNPNLS*QTFRKV
Trigger: CACCTTCCTGAAAGTCTGCCACGATAAATTTGGATT...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCTGTCCTGCTTGGTGTaGTTGACTATGGACCGGACT +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRLSCLV*LTMDRT
Trigger: AGTCCGGTCCATAGTCAACCACACCAAGCAGGACAG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACTGCAGGCTTTGCAGTTaGTGGTCTTGTCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADCRLCS*WSCQTC
Trigger: ACACGTTTGACAAGACCACCAACTGCAAAGCCTGCA...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCTGGGCAGTGGAAGACTaGGAGGTTGGTATTTCCCCT +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRWAVED*EVGISP
Trigger: AGGGGAAATACCAACCTCCCAGTCTTCCACTGCCCA...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCCTTCTCCACCACCTTaGTGTGCTTCACCTCATCAT +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRPSPPP*CASPHH
Trigger: ATGATGAGGTGAAGCACATCAAGGTGGTGGAGAAGG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCTCTTCTACGTACGTTaGAGGAAACCAGCCAATCCG +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRLFYVR*RKPANP
Trigger: CGGATTGGCTGGTTTCCTTCAACGTACGTAGAAGAG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCTTGGTATTTCCCCTCTaGGTCACAGAGGAGCTAGAG +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRLVFPL*VTEELE
Trigger: CTCTAGCTCCTCTGTGACTCAGAGGGGAAATACCAA...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCAGTGTGGTGTCCAGCTaGTTGAAGCTCTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRSVVSS*LKLSFS
Trigger: ACTGAAGGAGAGCTTCAAGCAGCTGGACACCACACT...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACCCCTGTTTTCTTCCCTaGCCATTTCAGGGTTTTTAC +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADPCFLP*PFQGFY
Trigger: GTAAAAACCCTGAAATGGGCAGGGAAGAAAACAGGG...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAAATCCAAATTTATCGTaGCAGACTTTCAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SSALWVGLAQVSSMYNSINPNLS*QTFRKV
Trigger: CACCTTCCTGAAAGTCTGCCACGATAAATTTGGATT...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACATCTGGAAACTGTGGTaGTTGGCATTGGCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADIWKLW*LALALS
Trigger: AGACAAAGCCAATGCCAACCACCACAGTTTCCAGAT...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACTACATCTGGAAACTGTaGTGGTTGGCATTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADYIWKL*WLALAL
Trigger: CAAAGCCAATGCCAACCACCACAGTTTCCAGATGTA...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGCTTCACAGATGAGCTaGGGAAATACCCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRASQMS*GNTLTS
Trigger: GGAAGTCAGGGTATTTCCCCAGCTCATCTGTGAAGC...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGAAGACTGGGAGGTTaGTATTTCCCCTCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRGRLGG*YFPSES
Trigger: TGACTCAGAGGGGAAATACCAACCTCCCAGTCTTCC...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR TCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGTCTGGCTTGATGTTTaGCATGGCCATCTCAAACTG +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRVWLDV*HGHLKL
Trigger: CAGTTTGAGATGGCCATGTCAAACATCAAGCCAGAC...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCATTTTCATGGGCTGCTaGACCTCCACCTTGATGATG +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRIFMGC*TSTLMM
Trigger: CATCATCAAGGTGGAGGTGCAGCAGCCCATGAAAAT...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACACATTTTGCAGGCTTTaGAGTTGGTGGTCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADTFCRL*SWWSCQ
Trigger: TTGACAAGACCACCAACTGCAAAGCCTGCAAAATGT...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACAGACTTTCAGGAAGGTaGGTATGTTCTTCAAACACA +
Preference number: 4 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADRLSGR*VCSSNT
Trigger: TGTGTTTGAAGAACATACGCACCTTCCTGAAAGTCT...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR GCA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCAACAAGTACCTGTCCTaGTTGGTGTGGTTGACTATG +
Preference number: 4 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRNKYLS*LVWLTM
Trigger: CATAGTCAACCACACCAAGCAGGACAGGTACTTGTT...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 90 bp CGCCACTGCTCCATGGCGCCCGCGGGCCCGACCGGCTCAGGGCAGTaGTCGAGCCAAAGTGCAGCGGCCGCGGGGCATCCCGCCCGCGCG +
Preference number: 5 (lower is better)
Translates to: RHCSMAPAGPTGSGQ*SSQSAAAAGHPARA
Trigger: CGCGCGGGCGGGATGCCCCGCGGCCGCTGCACTTTGGCTCGAGCACTGCCCTGAGCCGGTCGGGCCCGCGGGCGCCATGGAGCAGTGGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371851.1
CDS GCA 90 bp GGCAGGACCTTGCAATCGATGAGCCAGCGGCCGCACTGCCGCCACTaGTCCATGGCGCCCGCGGGCCCGACCGGCTCAGGGCAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: GRTLQSMSQRPHCRH*SMAPAGPTGSGQCS
Trigger: CGAGCACTGCCCTGAGCCGGTCGGGCCCGCGGGCGCCATGGAGCAGTGGCGGCAGTGCGGCCGCTGGCTCATCGATTGCAAGGTCCTGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371850.8
ENST00000371851.1
CDS GCA 90 bp TGGTTGGGCGGCAGGACCTTGCAATCGATGAGCCAGCGGCCGCACTaGCGCCACTGCTCCATGGCGCCCGCGGGCCCGACCGGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: WLGGRTLQSMSQRPH*RHCSMAPAGPTGSG
Trigger: CCCTGAGCCGGTCGGGCCCGCGGGCGCCATGGAGCAGTGGCGGCAGTGCGGCCGCTGGCTCATCGATTGCAAGGTCCTGCCGCCCAACCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371850.8
ENST00000371851.1
CDS CCA 90 bp GCCTGCGCCAGGTCGAAGACCACGGCCGAGGGCCACACCACCCGGTaGTTGGGCGGCAGGACCTTGCAATCGATGAGCCAGCGGCCGCAC +
Preference number: 5 (lower is better)
Translates to: ACARSKTTAEGHTTR*LGGRTLQSMSQRPH
Trigger: GTGCGGCCGCTGGCTCATCGATTGCAAGGTCCTGCCGCCCAACCACCGGGTGGTGTGGCCCTCGGCCGTGGTCTTCGACCTGGCGCAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCACTTCCAGGCACTCCTaGTGTGCCCCGACGCCACAC +
Preference number: 5 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPTSRHS*CAPTPH
Trigger: GTGTGGCGTCGGGGCACACAAGGAGTGCCTGGAAGT...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGACTTCCAGGCACTCCTaGTGTGCCCCGACGCCACAC +
Preference number: 5 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGTSRHS*CAPTPH
Trigger: GTGTGGCGTCGGGGCACACAAGGAGTGCCTGGAAGT...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCTGCATGGCCACCATCTaGGGACCTGGTCCCGCTCCG +
Preference number: 5 (lower is better)
Translates to: LALVPSASRGLTPPPGSSCMATI*GPGPAP
Trigger: CGGAGCGGGACCAGGTCCCAAGATGGTGGCCATGCA...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCTTGGGCGGCAGGACCTaGCAATCGATGAGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: LALVPSASRGLTPPPGSSLGGRT*QSMSQR
Trigger: CCGCTGGCTCATCGATTGCAAGGTCCTGCCGCCCAA...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCGCCCCGACGCCACACTaGGTACACATGTATCCCTGG +
Preference number: 5 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPAPTPH*VHMYPW
Trigger: CCAGGGATACATGTGTACCAAGTGTGGCGTCGGGGC...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGTGGGACTTGAGCAGGTaGTCCGTCTGCTGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGWDLSR*SVCCLS
Trigger: GGAGAGGCAGCAGACGGACAACCTGCTCAAGTCCCA...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCCAGCCAATCCGTCCGTaGGTCTCGCCCTTCCACCAG +
Preference number: 5 (lower is better)
Translates to: LALVPSASRGLTPPPGSSQPIRP*VSPFHQ
Trigger: CTGGTGGAAGGGCGAGACCAACGGACGGATTGGCTG...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGGTCGAAGGCCAGGAGTaGTGGCTGGGGGAGGTAATG +
Preference number: 5 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGVEGQE*WLGEVM
Trigger: CATTACCTCCCCCAGCCACAACTCCTGGCCTTCGAC...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTGCCCCGACGCCACACTaGGTACACATGTATCCCTGG +
Preference number: 5 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSAPTPH*VHMYPW
Trigger: CCAGGGATACATGTGTACCAAGTGTGGCGTCGGGGC...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCGCCCCGACGCCACACTaGGTACACATGTATCCCTGG +
Preference number: 5 (lower is better)
Translates to: LALVPSASRGLTPPPGSSAPTPH*VHMYPW
Trigger: CCAGGGATACATGTGTACCAAGTGTGGCGTCGGGGC...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCTGGGACTTGAGCAGGTaGTCCGTCTGCTGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LALVPSASRGLTPPPGSSWDLSR*SVCCLS
Trigger: GGAGAGGCAGCAGACGGACAACCTGCTCAAGTCCCA...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTGGAGTCAGGGAAGTCTaGGGAGCCAGAGTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSGVREV*GARVAA
Trigger: TGCAGCCACTCTGGCTCCCAAGACTTCCCTGACTCC...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTGTCGAAGGCCAGGAGTaGTGGCTGGGGGAGGTAATG +
Preference number: 5 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSVEGQE*WLGEVM
Trigger: CATTACCTCCCCCAGCCACAACTCCTGGCCTTCGAC...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGTCATTTCCCAAGCCTTaGTCGAGGGCCCCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGSFPKP*SRAPLS
Trigger: GGAGAGAGGGGCCCTCGACAAAGGCTTGGGAAATGA...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCACAGTTTGTGTCCATTaGGGGTTCCCGCCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPTVCVH*GFPPAG
Trigger: CCCAGCTGGCGGGAACCCCAAATGGACACAAACTGT...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 90 bp TCCGTCCGTTGGTCTCGCCCTTCCACCAGCCCTGGTCTCCGCCGATaGGGCTGTAGATCCTCACCACGTCACCCTCCCGCAGCGAAAGCT +
Preference number: 5 (lower is better)
Translates to: SVRWSRPSTSPGLRR*GCRSSPRHPPAAKA
Trigger: AGCTTTCGCTGCGGGAGGGTGACGTGGTGAGGATCTACAGCCGCATCGGCGGAGACCAGGGCTGGTGGAAGGGCGAGACCAACGGACGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGATCTGCGGCCGGAAGTaGATGTCCTTGAGGTCGATG +
Preference number: 5 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGICGRK*MSLRSM
Trigger: CATCGACCTCAAGGACATCAACTTCCGGCCGCAGAT...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCATCTGCGGCCGGAAGTaGATGTCCTTGAGGTCGATG +
Preference number: 5 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPICGRK*MSLRSM
Trigger: CATCGACCTCAAGGACATCAACTTCCGGCCGCAGAT...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGAAAGGCCTGATCCCTTaGTTCTGCGCGATGCTGTGC +
Preference number: 5 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGKGLIP*FCAMLC
Trigger: GCACAGCATCGCGCAGAACAAAGGGATCAGGCCTTT...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCAAGAGCAGGTGGTATTaGAGCACCCTCTGCATGGGG +
Preference number: 5 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPKSRWY*STLCMG
Trigger: CCCCATGCAGAGGGTGCTCAAATACCACCTGCTCTT...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTGGGTCGTCGGTCATCTaGTGGAACAGCAGCTCGATG +
Preference number: 5 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSGSSVI*WNSSSM
Trigger: CATCGAGCTGCTGTTCCACAAGATGACCGACGACCC...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCGTGGTGTCCAGCTGCTaGAAGCTCTCCTTCAGTGAG +
Preference number: 5 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPVVSSC*KLSFSE
Trigger: CTCACTGAAGGAGAGCTTCAAGCAGCTGGACACCAC...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCACAGTTTGTGTCCATTaGGGGTTCCCGCCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: LALVPSASRGLTPPPGSSTVCVH*GFPPAG
Trigger: CCCAGCTGGCGGGAACCCCAAATGGACACAAACTGT...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 90 bp GGCCTTGGCAGCGCACTCCGGAGAGCTCACCTGATCCCTTTGTTCTaGGCGATGCTGTGCAGGGAGAGCCTCGACACCGCGGAGATGACC +
Preference number: 5 (lower is better)
Translates to: GLGSALRRAHLIPLF*AMLCRESLDTAEMT
Trigger: GGTCATCTCCGCGGTGTCGAGGCTCTCCCTGCACAGCATCGCGCAGAACAAAGGGATCAGGTGAGCTCTCCGGAGTGCGCTGCCAAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486113.1
CDS-3UTR CAA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCAAGAGCAGGTGGTATTaGAGCACCCTCTGCATGGGG +
Preference number: 5 (lower is better)
Translates to: LALVPSASRGLTPPPGSSKSRWY*STLCMG
Trigger: CCCCATGCAGAGGGTGCTCAAATACCACCTGCTCTT...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCTCCTGCTTGGTGTGGTaGACTATGGACCGGACTTTC +
Preference number: 5 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPSCLVW*TMDRTF
Trigger: GAAAGTCCGGTCCATAGTCAACCACACCAAGCAGGA...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGCACTTCTTGACGTCCTaGTTGTTCATGGGGTCGTCG +
Preference number: 5 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGHFLTS*LFMGSS
Trigger: CGACGACCCCATGAACAACAAGGACGTCAAGAAGTG...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCTGTGGTGGTTGGCATaGGCTTTGTCTGGCTTGATG +
Preference number: 5 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPLWWLA*ALSGLM
Trigger: CATCAAGCCAGACAAAGCCAATGCCAACCACCACAG...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGGCAGGAGAAGTGAACTaGCAGGGAGGTATCACTTCC +
Preference number: 5 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGAGEVN*QGGITS
Trigger: GGAAGTGATACCTCCCTGCAAGTTCACTTCTCCTGC...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGGTGATGTGGATCCAGTaGTCCTTCTCCACCACCTTG +
Preference number: 5 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGVMWIQ*SFSTTL
Trigger: CAAGGTGGTGGAGAAGGACAACTGGATCCACATCAC...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCGAAAATCTGCGAGTCTaGTCCACGTTCCTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPENLRV*STFLPS
Trigger: TGACGGCAGGAACGTGGACAAGACTCGCAGATTTTC...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTCCAAGAGCACTTATTTaGAGTCGCCCGAGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSPRALI*SRPRPS
Trigger: ACTGGGCCTCGGGCGACTCAAAATAAGTGCTCTTGG...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CCA 90 bp GTTACCTGCAAACCAGGGGTATGCAGTGTAGTCGATCTCCCGGGATaGCGGCCGGCTGATGGGCGGCCTTCCATCCACAGGGCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: VTCKPGVCSVVDLPG*RPADGRPSIHRAGL
Trigger: AAGCCCTGCCCTGTGGATGGAAGGCCGCCCATCAGCCGGCCGCCATCCCGGGAGATCGACTACACTGCATACCCCTGGTTTGCAGGTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCAGGCAGCAGTTCCTCTaGTCATCTTCAGTCATGCCC +
Preference number: 5 (lower is better)
Translates to: LALVPSASRGLTPPPGSSRQQFL*SSSVMP
Trigger: GGGCATGACTGAAGATGACAAGAGGAACTGCTGCCT...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGAAGTACCTGTCCTGCTaGGTGTGGTTGACTATGGAC +
Preference number: 5 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGKYLSC*VWLTMD
Trigger: GTCCATAGTCAACCACACCAAGCAGGACAGGTACTT...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTTTCTTGACGTCCTTGTaGTTCATGGGGTCGTCGGTC +
Preference number: 5 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSFLTSL*FMGSSV
Trigger: GACCGACGACCCCATGAACAACAAGGACGTCAAGAA...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTTGGAAACTGTGGTGGTaGGCATTGGCTTTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSWKLWW*ALALSG
Trigger: GCCAGACAAAGCCAATGCCAACCACCACAGTTTCCA...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGTTGCAGGCTTTGCAGTaGGTGGTCTTGTCAAACGTG +
Preference number: 5 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGLQALQ*VVLSNV
Trigger: CACGTTTGACAAGACCACCAACTGCAAAGCCTGCAA...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCCCCCTGAGGAACATTTaGCAGGCTTTGCAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: LALVPSASRGLTPPPGSSPLRNI*QALQLV
Trigger: CACCAACTGCAAAGCCTGCAAAATGTTCCTCAGGGG...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTCCCCTGAGGAACATTTaGCAGGCTTTGCAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSPLRNI*QALQLV
Trigger: CACCAACTGCAAAGCCTGCAAAATGTTCCTCAGGGG...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCTCCTTCTCCACCACCTaGATGTGCTTCACCTCATCA +
Preference number: 5 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPSFSTT*MCFTSS
Trigger: TGATGAGGTGAAGCACATCAAGGTGGTGGAGAAGGA...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGTCCTTCTCCACCACCTaGATGTGCTTCACCTCATCA +
Preference number: 5 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGSFSTT*MCFTSS
Trigger: TGATGAGGTGAAGCACATCAAGGTGGTGGAGAAGGA...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTGTGATGTGGATCCAGTaGTCCTTCTCCACCACCTTG +
Preference number: 5 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSVMWIQ*SFSTTL
Trigger: CAAGGTGGTGGAGAAGGACAACTGGATCCACATCAC...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCGTGATGTGGATCCAGTaGTCCTTCTCCACCACCTTG +
Preference number: 5 (lower is better)
Translates to: LALVPSASRGLTPPPGSSVMWIQ*SFSTTL
Trigger: CAAGGTGGTGGAGAAGGACAACTGGATCCACATCAC...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTGAAAATCTGCGAGTCTaGTCCACGTTCCTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSENLRV*STFLPS
Trigger: TGACGGCAGGAACGTGGACAAGACTCGCAGATTTTC...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGTTGCAGTTGGTGGTCTaGTCAAACGTGTACATCTGG +
Preference number: 5 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGLQLVV*SNVYIW
Trigger: CCAGATGTACACGTTTGACAAGACCACCAACTGCAA...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGCCGCTGGCGTGGGACTaGAGCAGGTTGTCCGTCTGC +
Preference number: 5 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLPLAWD*SRLSVC
Trigger: GCAGACGGACAACCTGCTCAAGTCCCACGCCAGCGG...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTTCCTTCTCCACCACCTaGATGTGCTTCACCTCATCA +
Preference number: 5 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSSFSTT*MCFTSS
Trigger: TGATGAGGTGAAGCACATCAAGGTGGTGGAGAAGGA...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCCCTCTTCTACGTACGTaGAAGGAAACCAGCCAATCC +
Preference number: 5 (lower is better)
Translates to: LALVPSASRGLTPPPGSSPLLRT*KETSQS
Trigger: GGATTGGCTGGTTTCCTTCAACGTACGTAGAAGAGG...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTGACCGGGCAGCAGGGTaGGAATTTCATCATTCCAAA +
Preference number: 5 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSDRAAG*EFHHSK
Trigger: TTTGGAATGATGAAATTCCAACCCTGCTGCCCGGTC...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CGCCTGCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCTGGCAAATGTACAGTTaGTGTCCATTTGGGGTTCCC +
Preference number: 5 (lower is better)
Translates to: RLLGRRSQSAGCTPTRRPWQMYS*CPFGVP
Trigger: GGGAACCCCAAATGGACACAAACTGTACATTTGCCA...GGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGCAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CCA 90 bp GTGACAAGGCACGCTGGTGTCGATGGAGATGAAAGGACCCGGCCTTaGCAGCGCACTCCGGAGAGCTCACCTGATCCCTTTGTTCTGCGC +
Preference number: 5 (lower is better)
Translates to: VTRHAGVDGDERTRP*QRTPESSPDPFVLR
Trigger: GCGCAGAACAAAGGGATCAGGTGAGCTCTCCGGAGTGCGCTGCCAAGGCCGGGTCCTTTCATCTCCATCGACACCAGCGTGCCTTGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486113.1
CDS-3UTR CAA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGTTGGGCGGCAGGACCTaGCAATCGATGAGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLLGGRT*QSMSQR
Trigger: CCGCTGGCTCATCGATTGCAAGGTCCTGCCGCCCAA...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTCAGACGATGACCACCTaGTCAAACAGGAACAAGTAC +
Preference number: 5 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSQTMTT*SNRNKY
Trigger: GTACTTGTTCCTGTTTGACAAGGTGGTCATCGTCTG...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTTGGTTGGCATTGGCTTaGTCTGGCTTGATGTTTGAC +
Preference number: 5 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSWLALA*SGLMFD
Trigger: GTCAAACATCAAGCCAGACAAAGCCAATGCCAACCA...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTGCATGGCCACCATCTaGGGACCTGGTCCCGCTCCG +
Preference number: 5 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGCMATI*GPGPAP
Trigger: CGGAGCGGGACCAGGTCCCAAGATGGTGGCCATGCA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACTGCATGGCCACCATCTaGGGACCTGGTCCCGCTCCG +
Preference number: 5 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHCMATI*GPGPAP
Trigger: CGGAGCGGGACCAGGTCCCAAGATGGTGGCCATGCA...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGCCGCTGGCGTGGGACTaGAGCAGGTTGTCCGTCTGC +
Preference number: 5 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGPLAWD*SRLSVC
Trigger: GCAGACGGACAACCTGCTCAAGTCCCACGCCAGCGG...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTTGGGCGGCAGGACCTaGCAATCGATGAGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGLGGRT*QSMSQR
Trigger: CCGCTGGCTCATCGATTGCAAGGTCCTGCCGCCCAA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTTTCCTCAAGGTCTCCTaGTCCCGTTTAACTTCATTG +
Preference number: 5 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSFLKVS*SRLTSL
Trigger: CAATGAAGTTAAACGGGACAAGGAGACCTTGAGGAA...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTAACATTTTGCAGGCTTaGCAGTTGGTGGTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSNILQA*QLVVLS
Trigger: TGACAAGACCACCAACTGCAAAGCCTGCAAAATGTT...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp GCTGGGCCGCAGGTCGCAAAGTGCTGGGTGTACCCCGACACGGAGGCCCCAGGGACCTCATCATTGAACTaGATGCTTATTGCAAAGCGC +
Preference number: 5 (lower is better)
Translates to: AGPQVAKCWVYPDTEAPGTSSLN*MLIAKR
Trigger: GCGCTTTGCAATAAGCATCAAGTTCAATGATGAGGT...CCCTGGGGCCTCCGTGTCGGGGTACACCCAGCACTTTGCGACCTGCGGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACCAGCCAATCCGTCCGTaGGTCTCGCCCTTCCACCAG +
Preference number: 5 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHQPIRP*VSPFHQ
Trigger: CTGGTGGAAGGGCGAGACCAACGGACGGATTGGCTG...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGGTCGAAGGCCAGGAGTaGTGGCTGGGGGAGGTAATG +
Preference number: 5 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLVEGQE*WLGEVM
Trigger: CATTACCTCCCCCAGCCACAACTCCTGGCCTTCGAC...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 90 bp GCACTCCGGAGAGCTCACCTGATCCCTTTGTTCTGCGCGATGCTGTaGAGGGAGAGCCTCGACACCGCGGAGATGACCTTTCCAAAGTCT +
Preference number: 5 (lower is better)
Translates to: ALRRAHLIPLFCAML*RESLDTAEMTFPKS
Trigger: AGACTTTGGAAAGGTCATCTCCGCGGTGTCGAGGCTCTCCCTGCACAGCATCGCGCAGAACAAAGGGATCAGGTGAGCTCTCCGGAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486113.1
CDS-3UTR CAA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACCGGAAGTTGATGTCCTaGAGGTCGATGGAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHRKLMS*RSMEPG
Trigger: CCCCGGCTCCATCGACCTCAAGGACATCAACTTCCG...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACGGGTCGTCGGTCATCTaGTGGAACAGCAGCTCGATG +
Preference number: 5 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHGSSVI*WNSSSM
Trigger: CATCGAGCTGCTGTTCCACAAGATGACCGACGACCC...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAACTTCCAGGCACTCCTaGTGTGCCCCGACGCCACAC +
Preference number: 5 (lower is better)
Translates to: SSALWVGLAQVSSMYNSITSRHS*CAPTPH
Trigger: GTGTGGCGTCGGGGCACACAAGGAGTGCCTGGAAGT...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTTGCTTCACCTCATCATaGAACTTGATGCTTATTGCA +
Preference number: 5 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSCFTSS*NLMLIA
Trigger: TGCAATAAGCATCAAGTTCAATGATGAGGTGAAGCA...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATACAGCCAATCCGTCCGTaGGTCTCGCCCTTCCACCAG +
Preference number: 5 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIQPIRP*VSPFHQ
Trigger: CTGGTGGAAGGGCGAGACCAACGGACGGATTGGCTG...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGCCAAGAGCACTTATTTaGAGTCGCCCGAGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLPRALI*SRPRPS
Trigger: ACTGGGCCTCGGGCGACTCAAAATAAGTGCTCTTGG...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTCATTTCCCAAGCCTTaGTCGAGGGCCCCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGSFPKP*SRAPLS
Trigger: GGAGAGAGGGGCCCTCGACAAAGGCTTGGGAAATGA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 90 bp TCCTCTGAGGGAAAAGGCCTGATCCCTTTGTTCTGCGCGATGCTGTaGAGGGAGAGCCTCGACACCGCGGAGATGACCTTTCCAAAGTCT +
Preference number: 5 (lower is better)
Translates to: SSEGKGLIPLFCAML*RESLDTAEMTFPKS
Trigger: AGACTTTGGAAAGGTCATCTCCGCGGTGTCGAGGCTCTCCCTGCACAGCATCGCGCAGAACAAAGGGATCAGGCCTTTTCCCTCAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGATCTGCGGCCGGAAGTaGATGTCCTTGAGGTCGATG +
Preference number: 5 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGICGRK*MSLRSM
Trigger: CATCGACCTCAAGGACATCAACTTCCGGCCGCAGAT...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAAAGGCCTGATCCCTTaGTTCTGCGCGATGCTGTGC +
Preference number: 5 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGKGLIP*FCAMLC
Trigger: GCACAGCATCGCGCAGAACAAAGGGATCAGGCCTTT...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACAAAGGCCTGATCCCTTaGTTCTGCGCGATGCTGTGC +
Preference number: 5 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHKGLIP*FCAMLC
Trigger: GCACAGCATCGCGCAGAACAAAGGGATCAGGCCTTT...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACGTGGTGTCCAGCTGCTaGAAGCTCTCCTTCAGTGAG +
Preference number: 5 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHVVSSC*KLSFSE
Trigger: CTCACTGAAGGAGAGCTTCAAGCAGCTGGACACCAC...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CTGGCTCTGGTCCCGTCTGCCTCCCGAGGTCTGACACCTCCCCCTGGGAGCAGCAGAACTCAGGTTTATTaGCAAGTAAAAACCATGGTC +
Preference number: 5 (lower is better)
Translates to: LALVPSASRGLTPPPGSSRTQVY*QVKTMV
Trigger: GACCATGGTTTTTACTTGCAAATAAACCTGAGTTCT...GCTGCTCCCAGGGGGAGGTGTCAGACCTCGGGAGGCAGACGGGACCAGAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CCACTACCCAGAGCCTGGCTCGCAGCGCTGTCGGTGCCCCCTCCTCTGCGCTCTAGAACTCAGGTTTATTaGCAAGTAAAAACCATGGTC +
Preference number: 5 (lower is better)
Translates to: PLPRAWLAALSVPPPLRSRTQVY*QVKTMV
Trigger: GACCATGGTTTTTACTTGCAAATAAACCTGAGTTCT...AGAGCGCAGAGGAGGGGGCACCGACAGCGCTGCGAGCCAGGCTCTGGGTAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 90 bp TACATCGCCAAGTCCTGCATGGCTTCCAGTGCTTCTTTGAGCTGCTaGCTCTCAGGCCGTTCCGCAGAATGGCTCAGAAGCTCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: YIAKSCMASSASLSC*LSGRSAEWLRSSFK
Trigger: CTTGAAGGAGCTTCTGAGCCATTCTGCGGAACGGCCTGAGAGGCAGCAGCTCAAAGAAGCACTGGAAGCCATGCAGGACTTGGCGATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 90 bp ATGTACATCGCCAAGTCCTGCATGGCTTCCAGTGCTTCTTTGAGCTaGTGCCTCTCAGGCCGTTCCGCAGAATGGCTCAGAAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: MYIAKSCMASSASLS*CLSGRSAEWLRSSF
Trigger: GAAGGAGCTTCTGAGCCATTCTGCGGAACGGCCTGAGAGGCAGCAGCTCAAAGAAGCACTGGAAGCCATGCAGGACTTGGCGATGTACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 90 bp GCTAGAGACAGACTTCAGGGCTGGAGTGACTCTCCCAAGAAAATCTaGGAGTCTTGTCCACGTTCCTGCCGTCACTGGATGCCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ARDRLQGWSDSPKKI*ESCPRSCRHWMPSS
Trigger: AGAGGAGGGCATCCAGTGACGGCAGGAACGTGGACAAGACTCGCAGATTTTCTTGGGAGAGTCACTCCAGCCCTGAAGTCTGTCTCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGCAGCAGTTCCTCTaGTCATCTTCAGTCATGCCC +
Preference number: 5 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGRQQFL*SSSVMP
Trigger: GGGCATGACTGAAGATGACAAGAGGAACTGCTGCCT...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTTCTTGACGTCCTTGTaGTTCATGGGGTCGTCGGTC +
Preference number: 5 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGFLTSL*FMGSSV
Trigger: GACCGACGACCCCATGAACAACAAGGACGTCAAGAA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGCTGTGGTGGTTGGCATaGGCTTTGTCTGGCTTGATG +
Preference number: 5 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGLWWLA*ALSGLM
Trigger: CATCAAGCCAGACAAAGCCAATGCCAACCACCACAG...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGTTGCAGGCTTTGCAGTaGGTGGTCTTGTCAAACGTG +
Preference number: 5 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLLQALQ*VVLSNV
Trigger: CACGTTTGACAAGACCACCAACTGCAAAGCCTGCAA...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACGCAGGAGAAGTGAACTaGCAGGGAGGTATCACTTCC +
Preference number: 5 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHAGEVN*QGGITS
Trigger: GGAAGTGATACCTCCCTGCAAGTTCACTTCTCCTGC...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATATCATTTCCCAAGCCTTaGTCGAGGGCCCCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: SSALWVGLAQVSSMYNSISFPKP*SRAPLS
Trigger: GGAGAGAGGGGCCCTCGACAAAGGCTTGGGAAATGA...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS TCA 90 bp ATAAAGACACAGGCAGAGGGCATCTGCTTCCAACCCCAGTATCTGTaGCAAGGCACGCTGGTGTCGATGGAGATGAAAGGACCCGGCCTT +
Preference number: 5 (lower is better)
Translates to: IKTQAEGICFQPQYL*QGTLVSMEMKGPGL
Trigger: AAGGCCGGGTCCTTTCATCTCCATCGACACCAGCGTGCCTTGTCACAGATACTGGGGTTGGAAGCAGATGCCCTCTGCCTGTGTCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486113.1
CDS-3UTR CAA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGAGGCAGCAGTTCCTCTaGTCATCTTCAGTCATGCCC +
Preference number: 5 (lower is better)
Translates to: THWQMYSLCPFGVPASWGRQQFL*SSSVMP
Trigger: GGGCATGACTGAAGATGACAAGAGGAACTGCTGCCT...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGGTTCCCCGTCAATCTTaGGTCTTCCAAATTCCTCCA +
Preference number: 5 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLVPRQS*VFQIPP
Trigger: TGGAGGAATTTGGAAGACCAAAGATTGACGGGGAAC...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGCAGACGATGACCACCTaGTCAAACAGGAACAAGTAC +
Preference number: 5 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLQTMTT*SNRNKY
Trigger: GTACTTGTTCCTGTTTGACAAGGTGGTCATCGTCTG...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGTTCTTGACGTCCTTGTaGTTCATGGGGTCGTCGGTC +
Preference number: 5 (lower is better)
Translates to: THWQMYSLCPFGVPASWGFLTSL*FMGSSV
Trigger: GACCGACGACCCCATGAACAACAAGGACGTCAAGAA...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGCACTTCTTGACGTCCTaGTTGTTCATGGGGTCGTCG +
Preference number: 5 (lower is better)
Translates to: THWQMYSLCPFGVPASWGHFLTS*LFMGSS
Trigger: CGACGACCCCATGAACAACAAGGACGTCAAGAAGTG...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTTGCAGGCTTTGCAGTaGGTGGTCTTGTCAAACGTG +
Preference number: 5 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGLQALQ*VVLSNV
Trigger: CACGTTTGACAAGACCACCAACTGCAAAGCCTGCAA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCCGCTGGCGTGGGACTaGAGCAGGTTGTCCGTCTGC +
Preference number: 5 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRPLAWD*SRLSVC
Trigger: GCAGACGGACAACCTGCTCAAGTCCCACGCCAGCGG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGCTGTCGAATTTCTaGGCCTCTGTGATGTGGATC +
Preference number: 5 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGRLSNF*ASVMWI
Trigger: GATCCACATCACAGAGGCCAAGAAATTCGACAGCCT...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACAGGCTGTCGAATTTCTaGGCCTCTGTGATGTGGATC +
Preference number: 5 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHRLSNF*ASVMWI
Trigger: GATCCACATCACAGAGGCCAAGAAATTCGACAGCCT...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACCCTCTTCTACGTACGTaGAAGGAAACCAGCCAATCC +
Preference number: 5 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHPLLRT*KETSQS
Trigger: GGATTGGCTGGTTTCCTTCAACGTACGTAGAAGAGG...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGGACCGGGCAGCAGGGTaGGAATTTCATCATTCCAAA +
Preference number: 5 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGDRAAG*EFHHSK
Trigger: TTTGGAATGATGAAATTCCAACCCTGCTGCCCGGTC...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATACCAAGAGCACTTATTTaGAGTCGCCCGAGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIPRALI*SRPRPS
Trigger: ACTGGGCCTCGGGCGACTCAAAATAAGTGCTCTTGG...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 90 bp AGGTGGTATTTGAGCACCCTCTGCATGGGGACCACCAGCAGGTCTTaGAGCTTAAATTTTCCATCCTGGACCTTCAGTGTGCACTCCTCG +
Preference number: 5 (lower is better)
Translates to: RWYLSTLCMGTTSRS*SLNFPSWTFSVHSS
Trigger: CGAGGAGTGCACACTGAAGGTCCAGGATGGAAAATTTAAGCTGCAAGACCTGCTGGTGGTCCCCATGCAGAGGGTGCTCAAATACCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 90 bp AGAAGTGAACTTGCAGGGAGGTATCACTTCCAGGCACTCCTTGTGTaGCCCGACGCCACACTTGGTACACATGTATCCCTGGTAGAAGGT +
Preference number: 5 (lower is better)
Translates to: RSELAGRYHFQALLV*PDATLGTHVSLVEG
Trigger: ACCTTCTACCAGGGATACATGTGTACCAAGTGTGGCGTCGGGGCACACAAGGAGTGCCTGGAAGTGATACCTCCCTGCAAGTTCACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 90 bp CCAAGAAAATCTGCGAGTCTTGTCCACGTTCCTGCCGTCACTGGATaGCCTCCTCTTCTACGTACGTTGAAGGAAACCAGCCAATCCGTC +
Preference number: 5 (lower is better)
Translates to: PRKSASLVHVPAVTG*PPLLRTLKETSQSV
Trigger: GACGGATTGGCTGGTTTCCTTCAACGTACGTAGAAGAGGAGGGCATCCAGTGACGGCAGGAACGTGGACAAGACTCGCAGATTTTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGATCAGAAGCCTTTCCTaGAAATCGAGGAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLIRSLS*KSRKTL
Trigger: CAAGGTCTTCCTCGATTTCAAGGAAAGGCTTCTGAT...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGTTCCTCAAGGTCTCCTaGTCCCGTTTAACTTCATTG +
Preference number: 5 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLFLKVS*SRLTSL
Trigger: CAATGAAGTTAAACGGGACAAGGAGACCTTGAGGAA...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTTGGCTTTGTCTGGCTaGATGTTTGACATGGCCATC +
Preference number: 5 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGLALSG*MFDMAI
Trigger: GATGGCCATGTCAAACATCAAGCCAGACAAAGCCAA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACTGGTTGGCATTGGCTTaGTCTGGCTTGATGTTTGAC +
Preference number: 5 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHWLALA*SGLMFD
Trigger: GTCAAACATCAAGCCAGACAAAGCCAATGCCAACCA...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TCGGGCTCCCACATGTTCACAGCTAATCTCAGGCCCCTGCAGTTTAGCCCCCTGAACATTTTGCAGGCTTaGCAGTTGGTGGTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: SGSHMFTANLRPLQFSPLNILQA*QLVVLS
Trigger: TGACAAGACCACCAACTGCAAAGCCTGCAAAATGTT...CAGGGGGCTAAACTGCAGGGGCCTGAGATTAGCTGTGAACATGTGGGAGCCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGGACCGGGCAGCAGGGTaGGAATTTCATCATTCCAAA +
Preference number: 5 (lower is better)
Translates to: THWQMYSLCPFGVPASWGDRAAG*EFHHSK
Trigger: TTTGGAATGATGAAATTCCAACCCTGCTGCCCGGTC...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACACAGTTTGTGTCCATTaGGGGTTCCCGCCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADTVCVH*GFPPAG
Trigger: CCCAGCTGGCGGGAACCCCAAATGGACACAAACTGT...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTGGCAAATGTACAGTTaGTGTCCATTTGGGGTTCCC +
Preference number: 5 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGWQMYS*CPFGVP
Trigger: GGGAACCCCAAATGGACACAAACTGTACATTTGCCA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 90 bp TGGAGTGACTCTCCCAAGAAAATCTGCGAGTCTTGTCCACGTTCCTaGCGTCACTGGATGCCCTCCTCTTCTACGTACGTTGAAGGAAAC +
Preference number: 5 (lower is better)
Translates to: WSDSPKKICESCPRS*RHWMPSSSTYVEGN
Trigger: GTTTCCTTCAACGTACGTAGAAGAGGAGGGCATCCAGTGACGGCAGGAACGTGGACAAGACTCGCAGATTTTCTTGGGAGAGTCACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CCA 90 bp TCTCCCAAGAAAATCTGCGAGTCTTGTCCACGTTCCTGCCGTCACTaGATGCCCTCCTCTTCTACGTACGTTGAAGGAAACCAGCCAATC +
Preference number: 5 (lower is better)
Translates to: SPKKICESCPRSCRH*MPSSSTYVEGNQPI
Trigger: GATTGGCTGGTTTCCTTCAACGTACGTAGAAGAGGAGGGCATCCAGTGACGGCAGGAACGTGGACAAGACTCGCAGATTTTCTTGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CCA 90 bp GCTCCAACAGACACAATTAATGTCTTGGGGGCAAATGAGAAACAATaGCAGGGCCTGAGCACACCTCCTCTGCTCCTAGTGCGTCCTGAA +
Preference number: 5 (lower is better)
Translates to: APTDTINVLGANEKQ*QGLSTPPLLLVRPE
Trigger: TTCAGGACGCACTAGGAGCAGAGGAGGTGTGCTCAGGCCCTGCCATTGTTTCTCATTTGCCCCCAAGACATTAATTGTGTCTGTTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472905.1
CDS-3UTR CAA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCGGAAGTTGATGTCCTaGAGGTCGATGGAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRRKLMS*RSMEPG
Trigger: CCCCGGCTCCATCGACCTCAAGGACATCAACTTCCG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGATCAGAAGCCTTTCCTaGAAATCGAGGAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGIRSLS*KSRKTL
Trigger: CAAGGTCTTCCTCGATTTCAAGGAAAGGCTTCTGAT...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACTCCCGTTTAACTTCATaGATGTACATCGCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHSRLTS*MYIAKS
Trigger: GGACTTGGCGATGTACATCAATGAAGTTAAACGGGA...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp AGAAGGGGCTACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGTCCCGTTTAACTTCATaGATGTACATCGCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: RRGYKKPRSQQRLWQGAGSRLTS*MYIAKS
Trigger: GGACTTGGCGATGTACATCAATGAAGTTAAACGGGA...CCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGTAGCCCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAAAGTACCTGTCCTGCTaGGTGTGGTTGACTATGGAC +
Preference number: 5 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIKYLSC*VWLTMD
Trigger: GTCCATAGTCAACCACACCAAGCAGGACAGGTACTT...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGCAGACGATGACCACCTaGTCAAACAGGAACAAGTAC +
Preference number: 5 (lower is better)
Translates to: THWQMYSLCPFGVPASWGQTMTT*SNRNKY
Trigger: GTACTTGTTCCTGTTTGACAAGGTGGTCATCGTCTG...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGTTGGCTTTGTCTGGCTaGATGTTTGACATGGCCATC +
Preference number: 5 (lower is better)
Translates to: THWQMYSLCPFGVPASWGLALSG*MFDMAI
Trigger: GATGGCCATGTCAAACATCAAGCCAGACAAAGCCAA...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp ACCCATTGGCAAATGTACAGTTTGTGTCCATTTGGGGTTCCCGCCAGCTGGGGGTGGTTGGCATTGGCTTaGTCTGGCTTGATGTTTGAC +
Preference number: 5 (lower is better)
Translates to: THWQMYSLCPFGVPASWGWLALA*SGLMFD
Trigger: GTCAAACATCAAGCCAGACAAAGCCAATGCCAACCA...CCCCCAGCTGGCGGGAACCCCAAATGGACACAAACTGTACATTTGCCAATGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCTGGGACTTGAGCAGGTaGTCCGTCTGCTGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRWDLSR*SVCCLS
Trigger: GGAGAGGCAGCAGACGGACAACCTGCTCAAGTCCCA...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAAGGCTGTCGAATTTCTaGGCCTCTGTGATGTGGATC +
Preference number: 5 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIRLSNF*ASVMWI
Trigger: GATCCACATCACAGAGGCCAAGAAATTCGACAGCCT...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACGTGGTGTCCAGCTGCTaGAAGCTCTCCTTCAGTGAG +
Preference number: 5 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADVVSSC*KLSFSE
Trigger: CTCACTGAAGGAGAGCTTCAAGCAGCTGGACACCAC...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAGTTCCCCGTCAATCTTaGGTCTTCCAAATTCCTCCA +
Preference number: 5 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIVPRQS*VFQIPP
Trigger: TGGAGGAATTTGGAAGACCAAAGATTGACGGGGAAC...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACTCCTGCTTGGTGTGGTaGACTATGGACCGGACTTTC +
Preference number: 5 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADSCLVW*TMDRTF
Trigger: GAAAGTCCGGTCCATAGTCAACCACACCAAGCAGGA...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGGTCGTCGGTCATCTaGTGGAACAGCAGCTCGATG +
Preference number: 5 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRGSSVI*WNSSSM
Trigger: CATCGAGCTGCTGTTCCACAAGATGACCGACGACCC...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACTGGAAACTGTGGTGGTaGGCATTGGCTTTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADWKLWW*ALALSG
Trigger: GCCAGACAAAGCCAATGCCAACCACCACAGTTTCCA...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACGCAGGAGAAGTGAACTaGCAGGGAGGTATCACTTCC +
Preference number: 5 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADAGEVN*QGGITS
Trigger: GGAAGTGATACCTCCCTGCAAGTTCACTTCTCCTGC...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACGACTTCTTGACGTCCTaGTTGTTCATGGGGTCGTCG +
Preference number: 5 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADDFLTS*LFMGSS
Trigger: CGACGACCCCATGAACAACAAGGACGTCAAGAAGTC...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371850.8
CDS-3UTR CAA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAATCAGAAGCCTTTCCTaGAAATCGAGGAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIIRSLS*KSRKTL
Trigger: CAAGGTCTTCCTCGATTTCAAGGAAAGGCTTCTGAT...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp ACAAGAAGCCCAGGTCTCAACAGAGGCTTTGGCAAGGAGCTGGGAGGGAGACACTGCTTCACCTCATCATaGAACTTGATGCTTATTGCA +
Preference number: 5 (lower is better)
Translates to: TRSPGLNRGFGKELGGRHCFTSS*NLMLIA
Trigger: TGCAATAAGCATCAAGTTCAATGATGAGGTGAAGCA...GTGTCTCCCTCCCAGCTCCTTGCCAAAGCCTCTGTTGAGACCTGGGCTTCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CCA 90 bp GCTTTGCAGTTGGTGGTCTTGTCAAACGTGTACATCTGGAAACTGTaGTGGTTGGCATTGGCTTTGTCTGGCTTGATGTTTGACATGGCC +
Preference number: 5 (lower is better)
Translates to: ALQLVVLSNVYIWKL*WLALALSGLMFDMA
Trigger: GGCCATGTCAAACATCAAGCCAGACAAAGCCAATGCCAACCACCACAGTTTCCAGATGTACACGTTTGACAAGACCACCAACTGCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCTCCTGCTTGGTGTGGTaGACTATGGACCGGACTTTC +
Preference number: 5 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRSCLVW*TMDRTF
Trigger: GAAAGTCCGGTCCATAGTCAACCACACCAAGCAGGA...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACTTGGCTTTGTCTGGCTaGATGTTTGACATGGCCATC +
Preference number: 5 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADLALSG*MFDMAI
Trigger: GATGGCCATGTCAAACATCAAGCCAGACAAAGCCAA...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCTGTGGTGGTTGGCATaGGCTTTGTCTGGCTTGATG +
Preference number: 5 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRLWWLA*ALSGLM
Trigger: CATCAAGCCAGACAAAGCCAATGCCAACCACCACAG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCTGGAAACTGTGGTGGTaGGCATTGGCTTTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRWKLWW*ALALSG
Trigger: GCCAGACAAAGCCAATGCCAACCACCACAGTTTCCA...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACTTGCAGTTGGTGGTCTaGTCAAACGTGTACATCTGG +
Preference number: 5 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADLQLVV*SNVYIW
Trigger: CCAGATGTACACGTTTGACAAGACCACCAACTGCAA...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCCCCTGAGGAACATTTaGCAGGCTTTGCAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRPLRNI*QALQLV
Trigger: CACCAACTGCAAAGCCTGCAAAATGTTCCTCAGGGG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 90 bp CGCTGTTCCTTAATCCAAATTTATCGTGGCAGACTTTCAGGAAGGTaGGTATGTTCTTCAAACACAGAAACTGGGACATCTGCGGCCGGA +
Preference number: 5 (lower is better)
Translates to: RCSLIQIYRGRLSGR*VCSSNTETGTSAAG
Trigger: TCCGGCCGCAGATGTCCCAGTTTCTGTGTTTGAAGAACATACGCACCTTCCTGAAAGTCTGCCACGATAAATTTGGATTAAGGAACAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
ENST00000486113.1
CDS CCA 90 bp TTGCAGTTGGTGGTCTTGTCAAACGTGTACATCTGGAAACTGTGGTaGTTGGCATTGGCTTTGTCTGGCTTGATGTTTGACATGGCCATC +
Preference number: 5 (lower is better)
Translates to: LQLVVLSNVYIWKLW*LALALSGLMFDMAI
Trigger: GATGGCCATGTCAAACATCAAGCCAGACAAAGCCAATGCCAACCACCACAGTTTCCAGATGTACACGTTTGACAAGACCACCAACTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCCCTCTTCTACGTACGTaGAAGGAAACCAGCCAATCC +
Preference number: 5 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRPLLRT*KETSQS
Trigger: GGATTGGCTGGTTTCCTTCAACGTACGTAGAAGAGG...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGTTCCCCGTCAATCTTaGGTCTTCCAAATTCCTCCA +
Preference number: 5 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRVPRQS*VFQIPP
Trigger: TGGAGGAATTTGGAAGACCAAAGATTGACGGGGAAC...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACACCTCATCATTGAACTaGATGCTTATTGCAAAGCGC +
Preference number: 5 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADTSSLN*MLIAKR
Trigger: GCGCTTTGCAATAAGCATCAAGTTCAATGATGAGGT...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TCCTCTGCGCTCTGGGTGGGGCTAGCCCAGGTTTCCTCTATGTACAATAGCATAAGAACTCAGGTTTATTaGCAAGTAAAAACCATGGTC +
Preference number: 5 (lower is better)
Translates to: SSALWVGLAQVSSMYNSIRTQVY*QVKTMV
Trigger: GACCATGGTTTTTACTTGCAAATAAACCTGAGTTCT...TATGCTATTGTACATAGAGGAAACCTGGGCTAGCCCCACCCAGAGCGCAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCTTCCTCAAGGTCTCCTaGTCCCGTTTAACTTCATTG +
Preference number: 5 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRFLKVS*SRLTSL
Trigger: CAATGAAGTTAAACGGGACAAGGAGACCTTGAGGAA...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCAACATTTTGCAGGCTTaGCAGTTGGTGGTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRNILQA*QLVVLS
Trigger: TGACAAGACCACCAACTGCAAAGCCTGCAAAATGTT...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp CATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCGGCCAGGCAGACTGCTTCACCTCATCATaGAACTTGATGCTTATTGCA +
Preference number: 5 (lower is better)
Translates to: HFRVFTKDVLIWQRGQADCFTSS*NLMLIA
Trigger: TGCAATAAGCATCAAGTTCAATGATGAGGTGAAGCA...GTCTGCCTGGCCGCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS-3UTR CAA 90 bp TTCTTCCCTGCCCATTTCAGGGTTTTTACAAAAGATGTACTGATCTGGCAGCGCACCTCATCATTGAACTaGATGCTTATTGCAAAGCGC +
Preference number: 5 (lower is better)
Translates to: FFPAHFRVFTKDVLIWQRTSSLN*MLIAKR
Trigger: GCGCTTTGCAATAAGCATCAAGTTCAATGATGAGGT...GCGCTGCCAGATCAGTACATCTTTTGTAAAAACCCTGAAATGGGCAGGGAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 72 bp TCCATGGCGCCCGCGGGCCCGACCGGCTCAGGGCAGTaGTCGAGCCAAAGTGCAGCGGCCGCGGGGCATCCC +
Preference number: 6 (lower is better)
Translates to: SMAPAGPTGSGQ*SSQSAAAAGHP
Trigger: GGGATGCCCCGCGGCCGCTGCACTTTGGCTCGAGCACTGCCCTGAGCCGGTCGGGCCCGCGGGCGCCATGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371851.1
CDS GCA 72 bp TTGCAATCGATGAGCCAGCGGCCGCACTGCCGCCACTaGTCCATGGCGCCCGCGGGCCCGACCGGCTCAGGG +
Preference number: 6 (lower is better)
Translates to: LQSMSQRPHCRH*SMAPAGPTGSG
Trigger: CCCTGAGCCGGTCGGGCCCGCGGGCGCCATGGAGCAGTGGCGGCAGTGCGGCCGCTGGCTCATCGATTGCAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371850.8
ENST00000371851.1
CDS GCA 72 bp GGCAGGACCTTGCAATCGATGAGCCAGCGGCCGCACTaGCGCCACTGCTCCATGGCGCCCGCGGGCCCGACC +
Preference number: 6 (lower is better)
Translates to: GRTLQSMSQRPH*RHCSMAPAGPT
Trigger: GGTCGGGCCCGCGGGCGCCATGGAGCAGTGGCGGCAGTGCGGCCGCTGGCTCATCGATTGCAAGGTCCTGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371850.8
ENST00000371851.1
CDS CAA 90 bp GGACCCGGCCTTGGCAGCGCACTCCGGAGAGCTCACCTGATCCCTTaGTTCTGCGCGATGCTGTGCAGGGAGAGCCTCGACACCGCGGAG +
Preference number: 6 (lower is better)
Translates to: GPGLGSALRRAHLIP*FCAMLCRESLDTAE
Trigger: CTCCGCGGTGTCGAGGCTCTCCCTGCACAGCATCGCGCAGAACAAAGGGATCAGGTGAGCTCTCCGGAGTGCGCTGCCAAGGCCGGGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486113.1
CDS GCA 72 bp TGGTCTCGCCCTTCCACCAGCCCTGGTCTCCGCCGATaGGGCTGTAGATCCTCACCACGTCACCCTCCCGCA +
Preference number: 6 (lower is better)
Translates to: WSRPSTSPGLRR*GCRSSPRHPPA
Trigger: TGCGGGAGGGTGACGTGGTGAGGATCTACAGCCGCATCGGCGGAGACCAGGGCTGGTGGAAGGGCGAGACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CCA 72 bp AGGTCGAAGACCACGGCCGAGGGCCACACCACCCGGTaGTTGGGCGGCAGGACCTTGCAATCGATGAGCCAG +
Preference number: 6 (lower is better)
Translates to: RSKTTAEGHTTR*LGGRTLQSMSQ
Trigger: CTGGCTCATCGATTGCAAGGTCCTGCCGCCCAACCACCGGGTGGTGTGGCCCTCGGCCGTGGTCTTCGACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
ENST00000486113.1
CDS TCA 72 bp GACCCGGCCTTGGCAGCGCACTCCGGAGAGCTCACCTaGTCCCTTTGTTCTGCGCGATGCTGTGCAGGGAGA +
Preference number: 6 (lower is better)
Translates to: DPALAAHSGELT*SLCSARCCAGR
Trigger: TCTCCCTGCACAGCATCGCGCAGAACAAAGGGATCAGGTGAGCTCTCCGGAGTGCGCTGCCAAGGCCGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486113.1
CDS GCA 72 bp AGCGCACTCCGGAGAGCTCACCTGATCCCTTTGTTCTaGGCGATGCTGTGCAGGGAGAGCCTCGACACCGCG +
Preference number: 6 (lower is better)
Translates to: SALRRAHLIPLF*AMLCRESLDTA
Trigger: CGCGGTGTCGAGGCTCTCCCTGCACAGCATCGCGCAGAACAAAGGGATCAGGTGAGCTCTCCGGAGTGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486113.1
CDS CCA 72 bp AAACCAGGGGTATGCAGTGTAGTCGATCTCCCGGGATaGCGGCCGGCTGATGGGCGGCCTTCCATCCACAGG +
Preference number: 6 (lower is better)
Translates to: KPGVCSVVDLPG*RPADGRPSIHR
Trigger: CCTGTGGATGGAAGGCCGCCCATCAGCCGGCCGCCATCCCGGGAGATCGACTACACTGCATACCCCTGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 90 bp CCTGGTCCCGCTCCGGAGGCGTCCAGATCTGCAGGAGAAGTGAACTaGCAGGGAGGTATCACTTCCAGGCACTCCTTGTGTGCCCCGACG +
Preference number: 6 (lower is better)
Translates to: PGPAPEASRSAGEVN*QGGITSRHSLCAPT
Trigger: CGTCGGGGCACACAAGGAGTGCCTGGAAGTGATACCTCCCTGCAAGTTCACTTCTCCTGCAGATCTGGACGCCTCCGGAGCGGGACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 72 bp CTTGGCAGCGCACTCCGGAGAGCTCACCTGATCCCTTaGTTCTGCGCGATGCTGTGCAGGGAGAGCCTCGAC +
Preference number: 6 (lower is better)
Translates to: LGSALRRAHLIP*FCAMLCRESLD
Trigger: GTCGAGGCTCTCCCTGCACAGCATCGCGCAGAACAAAGGGATCAGGTGAGCTCTCCGGAGTGCGCTGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486113.1
CDS TCA 72 bp CCTGGACCTTCAGTGTGCACTCCTCGACTTTCTGCCTaGAGTCCTCCCGGCTGGCCAGGAGCTGGTTCAGTG +
Preference number: 6 (lower is better)
Translates to: PGPSVCTPRLSA*SPPGWPGAGSV
Trigger: CACTGAACCAGCTCCTGGCCAGCCGGGAGGACTTCAGGCAGAAAGTCGAGGAGTGCACACTGAAGGTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 72 bp GTCTCCTCTGAGGGAAAAGGCCTGATCCCTTTGTTCTaGGCGATGCTGTGCAGGGAGAGCCTCGACACCGCG +
Preference number: 6 (lower is better)
Translates to: VSSEGKGLIPLF*AMLCRESLDTA
Trigger: CGCGGTGTCGAGGCTCTCCCTGCACAGCATCGCGCAGAACAAAGGGATCAGGCCTTTTCCCTCAGAGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CCA 72 bp CACGCTGGTGTCGATGGAGATGAAAGGACCCGGCCTTaGCAGCGCACTCCGGAGAGCTCACCTGATCCCTTT +
Preference number: 6 (lower is better)
Translates to: HAGVDGDERTRP*QRTPESSPDPF
Trigger: AAAGGGATCAGGTGAGCTCTCCGGAGTGCGCTGCCAAGGCCGGGTCCTTTCATCTCCATCGACACCAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486113.1
CDS TCA 72 bp AGTATCTGTGACAAGGCACGCTGGTGTCGATGGAGATaGAAGGACCCGGCCTTGGCAGCGCACTCCGGAGAG +
Preference number: 6 (lower is better)
Translates to: SICDKARWCRWR*KDPALAAHSGE
Trigger: CTCTCCGGAGTGCGCTGCCAAGGCCGGGTCCTTTCATCTCCATCGACACCAGCGTGCCTTGTCACAGATACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486113.1
CDS GCA 72 bp CCGCTGGCGTGGGACTTGAGCAGGTTGTCCGTCTGCTaGCTCTCCATGTTACCTGCAAACCAGGGGTATGCA +
Preference number: 6 (lower is better)
Translates to: PLAWDLSRLSVC*LSMLPANQGYA
Trigger: TGCATACCCCTGGTTTGCAGGTAACATGGAGAGGCAGCAGACGGACAACCTGCTCAAGTCCCACGCCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS TCA 72 bp CTGCCGTCACTGGATGCCCTCCTCTTCTACGTACGTTaGAGGAAACCAGCCAATCCGTCCGTTGGTCTCGCC +
Preference number: 6 (lower is better)
Translates to: LPSLDALLFYVR*RKPANPSVGLA
Trigger: GGCGAGACCAACGGACGGATTGGCTGGTTTCCTTCAACGTACGTAGAAGAGGAGGGCATCCAGTGACGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 72 bp GGAAAAGGCCTGATCCCTTTGTTCTGCGCGATGCTGTaGAGGGAGAGCCTCGACACCGCGGAGATGACCTTT +
Preference number: 6 (lower is better)
Translates to: GKGLIPLFCAML*RESLDTAEMTF
Trigger: AAAGGTCATCTCCGCGGTGTCGAGGCTCTCCCTGCACAGCATCGCGCAGAACAAAGGGATCAGGCCTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 72 bp GCCAAGTCCTGCATGGCTTCCAGTGCTTCTTTGAGCTaGTGCCTCTCAGGCCGTTCCGCAGAATGGCTCAGA +
Preference number: 6 (lower is better)
Translates to: AKSCMASSASLS*CLSGRSAEWLR
Trigger: TCTGAGCCATTCTGCGGAACGGCCTGAGAGGCAGCAGCTCAAAGAAGCACTGGAAGCCATGCAGGACTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 72 bp AGAGCTCACCTGATCCCTTTGTTCTGCGCGATGCTGTaGAGGGAGAGCCTCGACACCGCGGAGATGACCTTT +
Preference number: 6 (lower is better)
Translates to: RAHLIPLFCAML*RESLDTAEMTF
Trigger: AAAGGTCATCTCCGCGGTGTCGAGGCTCTCCCTGCACAGCATCGCGCAGAACAAAGGGATCAGGTGAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486113.1
CDS CAA 72 bp CCTGCCGTCACTGGATGCCCTCCTCTTCTACGTACGTaGAAGGAAACCAGCCAATCCGTCCGTTGGTCTCGC +
Preference number: 6 (lower is better)
Translates to: PAVTGCPPLLRT*KETSQSVRWSR
Trigger: GCGAGACCAACGGACGGATTGGCTGGTTTCCTTCAACGTACGTAGAAGAGGAGGGCATCCAGTGACGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 72 bp GGGGGCTCATGTAGTTCTTCTCAATGTCCTCCAGGGTaGGGTAGTACTTGGCCTCGGTCTCCTGGATCTCCA +
Preference number: 6 (lower is better)
Translates to: GGSCSSSQCPPG*GSTWPRSPGSP
Trigger: TGGAGATCCAGGAGACCGAGGCCAAGTACTACCGCACCCTGGAGGACATTGAGAAGAACTACATGAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 72 bp AAGTCCTGCATGGCTTCCAGTGCTTCTTTGAGCTGCTaGCTCTCAGGCCGTTCCGCAGAATGGCTCAGAAGC +
Preference number: 6 (lower is better)
Translates to: KSCMASSASLSC*LSGRSAEWLRS
Trigger: GCTTCTGAGCCATTCTGCGGAACGGCCTGAGAGGCAGCAGCTCAAAGAAGCACTGGAAGCCATGCAGGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 72 bp CTTGCAGGGAGGTATCACTTCCAGGCACTCCTTGTGTaGCCCGACGCCACACTTGGTACACATGTATCCCTG +
Preference number: 6 (lower is better)
Translates to: LAGRYHFQALLV*PDATLGTHVSL
Trigger: CAGGGATACATGTGTACCAAGTGTGGCGTCGGGGCACACAAGGAGTGCCTGGAAGTGATACCTCCCTGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 72 bp TACATCGCCAAGTCCTGCATGGCTTCCAGTGCTTCTTaGAGCTGCTGCCTCTCAGGCCGTTCCGCAGAATGG +
Preference number: 6 (lower is better)
Translates to: YIAKSCMASSAS*SCCLSGRSAEW
Trigger: CCATTCTGCGGAACGGCCTGAGAGGCAGCAGCTCAAAGAAGCACTGGAAGCCATGCAGGACTTGGCGATGTA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 72 bp GCTCCGGAGGCGTCCAGATCTGCAGGAGAAGTGAACTaGCAGGGAGGTATCACTTCCAGGCACTCCTTGTGT +
Preference number: 6 (lower is better)
Translates to: APEASRSAGEVN*QGGITSRHSLC
Trigger: ACACAAGGAGTGCCTGGAAGTGATACCTCCCTGCAAGTTCACTTCTCCTGCAGATCTGGACGCCTCCGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS TCA 72 bp CAGGCAGAGGGCATCTGCTTCCAACCCCAGTATCTGTaGCAAGGCACGCTGGTGTCGATGGAGATGAAAGGA +
Preference number: 6 (lower is better)
Translates to: QAEGICFQPQYL*QGTLVSMEMKG
Trigger: TCCTTTCATCTCCATCGACACCAGCGTGCCTTGTCACAGATACTGGGGTTGGAAGCAGATGCCCTCTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486113.1
CDS GCA 72 bp ATTGATGTACATCGCCAAGTCCTGCATGGCTTCCAGTaGTTCTTTGAGCTGCTGCCTCTCAGGCCGTTCCGC +
Preference number: 6 (lower is better)
Translates to: IDVHRQVLHGFQ*FFELLPLRPFR
Trigger: GCGGAACGGCCTGAGAGGCAGCAGCTCAAAGAAGCACTGGAAGCCATGCAGGACTTGGCGATGTACATCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 72 bp TCTGCGAGTCTTGTCCACGTTCCTGCCGTCACTGGATaGCCTCCTCTTCTACGTACGTTGAAGGAAACCAGC +
Preference number: 6 (lower is better)
Translates to: SASLVHVPAVTG*PPLLRTLKETS
Trigger: GCTGGTTTCCTTCAACGTACGTAGAAGAGGAGGGCATCCAGTGACGGCAGGAACGTGGACAAGACTCGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 72 bp CAGCCGCCAACGGGTTACGCGACAACACGCTGCAAATaGATGATAAAGACACAGGCAGAGGGCATCTGCTTC +
Preference number: 6 (lower is better)
Translates to: QPPTGYATTRCK*MIKTQAEGICF
Trigger: GAAGCAGATGCCCTCTGCCTGTGTCTTTATCATGCATTTGCAGCGTGTTGTCGCGTAACCCGTTGGCGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486113.1
CDS GCA 72 bp TTCCTGCAGCCGCCAACGGGTTACGCGACAACACGCTaGAAATGCATGATAAAGACACAGGCAGAGGGCATC +
Preference number: 6 (lower is better)
Translates to: FLQPPTGYATTR*KCMIKTQAEGI
Trigger: GATGCCCTCTGCCTGTGTCTTTATCATGCATTTGCAGCGTGTTGTCGCGTAACCCGTTGGCGGCTGCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486113.1
CDS CCA 72 bp GCCTTCCATCCACAGGGCAGGGCTTCACAGATGAGCTaGGGAAATACCCTGACTTCCTGGTTTGTACCAGAC +
Preference number: 6 (lower is better)
Translates to: AFHPQGRASQMS*GNTLTSWFVPD
Trigger: GTCTGGTACAAACCAGGAAGTCAGGGTATTTCCCCAGCTCATCTGTGAAGCCCTGCCCTGTGGATGGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 72 bp GAATGGCTCAGAAGCTCCTTCAAGAGCAGGTGGTATTaGAGCACCCTCTGCATGGGGACCACCAGCAGGTCT +
Preference number: 6 (lower is better)
Translates to: EWLRSSFKSRWY*STLCMGTTSRS
Trigger: AGACCTGCTGGTGGTCCCCATGCAGAGGGTGCTCAAATACCACCTGCTCTTGAAGGAGCTTCTGAGCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS TCA 72 bp GCGGTAGACGTCATCGTCATTCTCTGTGGTCTCCTCTaGGGGAAAAGGCCTGATCCCTTTGTTCTGCGCGAT +
Preference number: 6 (lower is better)
Translates to: AVDVIVILCGLL*GKRPDPFVLRD
Trigger: ATCGCGCAGAACAAAGGGATCAGGCCTTTTCCCTCAGAGGAGACCACAGAGAATGACGATGACGTCTACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS TCA 72 bp AATGGCTCAGAAGCTCCTTCAAGAGCAGGTGGTATTTaGGCACCCTCTGCATGGGGACCACCAGCAGGTCTT +
Preference number: 6 (lower is better)
Translates to: NGSEAPSRAGGI*APSAWGPPAGL
Trigger: AAGACCTGCTGGTGGTCCCCATGCAGAGGGTGCTCAAATACCACCTGCTCTTGAAGGAGCTTCTGAGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 72 bp AGACTTCAGGGCTGGAGTGACTCTCCCAAGAAAATCTaGGAGTCTTGTCCACGTTCCTGCCGTCACTGGATG +
Preference number: 6 (lower is better)
Translates to: RLQGWSDSPKKI*ESCPRSCRHWM
Trigger: CATCCAGTGACGGCAGGAACGTGGACAAGACTCGCAGATTTTCTTGGGAGAGTCACTCCAGCCCTGAAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CCA 72 bp TCTTTGAGCTGCTGCCTCTCAGGCCGTTCCGCAGAATaGCTCAGAAGCTCCTTCAAGAGCAGGTGGTATTTG +
Preference number: 6 (lower is better)
Translates to: SLSCCLSGRSAE*LRSSFKSRWYL
Trigger: CAAATACCACCTGCTCTTGAAGGAGCTTCTGAGCCATTCTGCGGAACGGCCTGAGAGGCAGCAGCTCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 72 bp GTGAACTTGCAGGGAGGTATCACTTCCAGGCACTCCTaGTGTGCCCCGACGCCACACTTGGTACACATGTAT +
Preference number: 6 (lower is better)
Translates to: VNLQGGITSRHS*CAPTPHLVHMY
Trigger: ATACATGTGTACCAAGTGTGGCGTCGGGGCACACAAGGAGTGCCTGGAAGTGATACCTCCCTGCAAGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 90 bp CAGGTGGTATTTGAGCACCCTCTGCATGGGGACCACCAGCAGGTCTaGCAGCTTAAATTTTCCATCCTGGACCTTCAGTGTGCACTCCTC +
Preference number: 6 (lower is better)
Translates to: QVVFEHPLHGDHQQV*QLKFSILDLQCALL
Trigger: GAGGAGTGCACACTGAAGGTCCAGGATGGAAAATTTAAGCTGCAAGACCTGCTGGTGGTCCCCATGCAGAGGGTGCTCAAATACCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS GCA 72 bp TCTCCCAAGAAAATCTGCGAGTCTTGTCCACGTTCCTaGCGTCACTGGATGCCCTCCTCTTCTACGTACGTT +
Preference number: 6 (lower is better)
Translates to: SPKKICESCPRS*RHWMPSSSTYV
Trigger: AACGTACGTAGAAGAGGAGGGCATCCAGTGACGGCAGGAACGTGGACAAGACTCGCAGATTTTCTTGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 72 bp TTGACGTCCTTGTTGTTCATGGGGTCGTCGGTCATCTaGTGGAACAGCAGCTCGATGATCTCCTTGAGCTCG +
Preference number: 6 (lower is better)
Translates to: LTSLLFMGSSVI*WNSSSMISLSS
Trigger: CGAGCTCAAGGAGATCATCGAGCTGCTGTTCCACAAGATGACCGACGACCCCATGAACAACAAGGACGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS TCA 72 bp AGAAGCCGTAGGACCACATTTTCCCGTGAGACTTCTTaGCGTCCTTGTTGTTCATGGGGTCGTCGGTCATCT +
Preference number: 6 (lower is better)
Translates to: RSRRTTFSRETS*RPCCSWGRRSS
Trigger: AGATGACCGACGACCCCATGAACAACAAGGACGTCAAGAAGTCTCACGGGAAAATGTGGTCCTACGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371850.8
CDS CCA 72 bp AAAATCTGCGAGTCTTGTCCACGTTCCTGCCGTCACTaGATGCCCTCCTCTTCTACGTACGTTGAAGGAAAC +
Preference number: 6 (lower is better)
Translates to: KICESCPRSCRH*MPSSSTYVEGN
Trigger: GTTTCCTTCAACGTACGTAGAAGAGGAGGGCATCCAGTGACGGCAGGAACGTGGACAAGACTCGCAGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 72 bp TTTGAGCACCCTCTGCATGGGGACCACCAGCAGGTCTaGCAGCTTAAATTTTCCATCCTGGACCTTCAGTGT +
Preference number: 6 (lower is better)
Translates to: FEHPLHGDHQQV*QLKFSILDLQC
Trigger: ACACTGAAGGTCCAGGATGGAAAATTTAAGCTGCAAGACCTGCTGGTGGTCCCCATGCAGAGGGTGCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 90 bp AAGGTGCCCCTGAGGAACATTTTGCAGGCTTTGCAGTTGGTGGTCTaGTCAAACGTGTACATCTGGAAACTGTGGTGGTTGGCATTGGCT +
Preference number: 6 (lower is better)
Translates to: KVPLRNILQALQLVV*SNVYIWKLWWLALA
Trigger: AGCCAATGCCAACCACCACAGTTTCCAGATGTACACGTTTGACAAGACCACCAACTGCAAAGCCTGCAAAATGTTCCTCAGGGGCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS TCA 72 bp CAAACAGGAACAAGTACCTGTCCTGCTTGGTGTGGTTaGCTATGGACCGGACTTTCAGTTCCCCGTCAATCT +
Preference number: 6 (lower is better)
Translates to: QTGTSTCPAWCG*LWTGLSVPRQS
Trigger: AGATTGACGGGGAACTGAAAGTCCGGTCCATAGTCAACCACACCAAGCAGGACAGGTACTTGTTCCTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CCA 72 bp TTGTCAAACAGGAACAAGTACCTGTCCTGCTTGGTGTaGTTGACTATGGACCGGACTTTCAGTTCCCCGTCA +
Preference number: 6 (lower is better)
Translates to: LSNRNKYLSCLV*LTMDRTFSSPS
Trigger: TGACGGGGAACTGAAAGTCCGGTCCATAGTCAACCACACCAAGCAGGACAGGTACTTGTTCCTGTTTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 72 bp TCAAACAGGAACAAGTACCTGTCCTGCTTGGTGTGGTaGACTATGGACCGGACTTTCAGTTCCCCGTCAATC +
Preference number: 6 (lower is better)
Translates to: SNRNKYLSCLVW*TMDRTFSSPSI
Trigger: GATTGACGGGGAACTGAAAGTCCGGTCCATAGTCAACCACACCAAGCAGGACAGGTACTTGTTCCTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 90 bp GTGGTCTTGTCAAACGTGTACATCTGGAAACTGTGGTGGTTGGCATaGGCTTTGTCTGGCTTGATGTTTGACATGGCCATCTCAAACTGC +
Preference number: 6 (lower is better)
Translates to: VVLSNVYIWKLWWLA*ALSGLMFDMAISNC
Trigger: GCAGTTTGAGATGGCCATGTCAAACATCAAGCCAGACAAAGCCAATGCCAACCACCACAGTTTCCAGATGTACACGTTTGACAAGACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 90 bp CAGTTGGTGGTCTTGTCAAACGTGTACATCTGGAAACTGTGGTGGTaGGCATTGGCTTTGTCTGGCTTGATGTTTGACATGGCCATCTCA +
Preference number: 6 (lower is better)
Translates to: QLVVLSNVYIWKLWW*ALALSGLMFDMAIS
Trigger: TGAGATGGCCATGTCAAACATCAAGCCAGACAAAGCCAATGCCAACCACCACAGTTTCCAGATGTACACGTTTGACAAGACCACCAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 90 bp CTGCAAACATCAAATTGTCAGGCTCCAACAGACACAATTAATGTCTaGGGGGCAAATGAGAAACAATGGCAGGGCCTGAGCACACCTCCT +
Preference number: 6 (lower is better)
Translates to: LQTSNCQAPTDTINV*GANEKQWQGLSTPP
Trigger: AGGAGGTGTGCTCAGGCCCTGCCATTGTTTCTCATTTGCCCCCAAGACATTAATTGTGTCTGTTGGAGCCTGACAATTTGATGTTTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472905.1
CDS CCA 72 bp GTGGTCTTGTCAAACGTGTACATCTGGAAACTGTGGTaGTTGGCATTGGCTTTGTCTGGCTTGATGTTTGAC +
Preference number: 6 (lower is better)
Translates to: VVLSNVYIWKLW*LALALSGLMFD
Trigger: GTCAAACATCAAGCCAGACAAAGCCAATGCCAACCACCACAGTTTCCAGATGTACACGTTTGACAAGACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 72 bp TCAAACGTGTACATCTGGAAACTGTGGTGGTTGGCATaGGCTTTGTCTGGCTTGATGTTTGACATGGCCATC +
Preference number: 6 (lower is better)
Translates to: SNVYIWKLWWLA*ALSGLMFDMAI
Trigger: GATGGCCATGTCAAACATCAAGCCAGACAAAGCCAATGCCAACCACCACAGTTTCCAGATGTACACGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 72 bp CTGAGGAACATTTTGCAGGCTTTGCAGTTGGTGGTCTaGTCAAACGTGTACATCTGGAAACTGTGGTGGTTG +
Preference number: 6 (lower is better)
Translates to: LRNILQALQLVV*SNVYIWKLWWL
Trigger: CAACCACCACAGTTTCCAGATGTACACGTTTGACAAGACCACCAACTGCAAAGCCTGCAAAATGTTCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 72 bp TCAAATTGTCAGGCTCCAACAGACACAATTAATGTCTaGGGGGCAAATGAGAAACAATGGCAGGGCCTGAGC +
Preference number: 6 (lower is better)
Translates to: SNCQAPTDTINV*GANEKQWQGLS
Trigger: GCTCAGGCCCTGCCATTGTTTCTCATTTGCCCCCAAGACATTAATTGTGTCTGTTGGAGCCTGACAATTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472905.1
CDS CCA 72 bp TTGGTGGTCTTGTCAAACGTGTACATCTGGAAACTGTaGTGGTTGGCATTGGCTTTGTCTGGCTTGATGTTT +
Preference number: 6 (lower is better)
Translates to: LVVLSNVYIWKL*WLALALSGLMF
Trigger: AAACATCAAGCCAGACAAAGCCAATGCCAACCACCACAGTTTCCAGATGTACACGTTTGACAAGACCACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 72 bp ATTTTCCTCAAGGTCTCCTTGTCCCGTTTAACTTCATaGATGTACATCGCCAAGTCCTGCATGGCTTCCAGT +
Preference number: 6 (lower is better)
Translates to: IFLKVSLSRLTS*MYIAKSCMASS
Trigger: ACTGGAAGCCATGCAGGACTTGGCGATGTACATCAATGAAGTTAAACGGGACAAGGAGACCTTGAGGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 72 bp GTCTTGTCAAACGTGTACATCTGGAAACTGTGGTGGTaGGCATTGGCTTTGTCTGGCTTGATGTTTGACATG +
Preference number: 6 (lower is better)
Translates to: VLSNVYIWKLWW*ALALSGLMFDM
Trigger: CATGTCAAACATCAAGCCAGACAAAGCCAATGCCAACCACCACAGTTTCCAGATGTACACGTTTGACAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CAA 72 bp TCTGTGATGTGGATCCAGTTGTCCTTCTCCACCACCTaGATGTGCTTCACCTCATCATTGAACTTGATGCTT +
Preference number: 6 (lower is better)
Translates to: SVMWIQLSFSTT*MCFTSSLNLML
Trigger: AAGCATCAAGTTCAATGATGAGGTGAAGCACATCAAGGTGGTGGAGAAGGACAACTGGATCCACATCACAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
CDS CCA 72 bp TCAAACAGCTCGCTGTTCCTTAATCCAAATTTATCGTaGCAGACTTTCAGGAAGGTGCGTATGTTCTTCAAA +
Preference number: 6 (lower is better)
Translates to: SNSSLFLNPNLS*QTFRKVRMFFK
Trigger: TTTGAAGAACATACGCACCTTCCTGAAAGTCTGCCACGATAAATTTGGATTAAGGAACAGCGAGCTGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371850.8
ENST00000371851.1
ENST00000406606.7
ENST00000472905.1
ENST00000486113.1