RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VASN (Homo sapiens)

Ensembl gene IDs: ENSG00000168140

Ensembl transcript IDs: ENST00000304735.4, ENST00000622615.1

Found 312 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATaGCAGGGCCCGCCGTGCCCAGGGACTGCACGTTGCGGAGGGCAG +
Preference number: 1 (lower is better)
Translates to: GVGEPSRAQACVTST*QGPPCPGTARCGGQ
Trigger: CTGCCCTCCGCAACGTGCAGTCCCTGGGCACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR GCA 90 bp AGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTaGCCAGGGACTGCACGTTGCGGAGGGCAGGGCGGACACTGTCCT +
Preference number: 1 (lower is better)
Translates to: SRAQACVTSTWQGPP*PGTARCGGQGGHCP
Trigger: AGGACAGTGTCCGCCCTGCCCTCCGCAACGTGCAGTCCCTGGGCACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR CCA 90 bp CCGCCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTaGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCA +
Preference number: 1 (lower is better)
Translates to: PPTRSPSALSGSFLH*PPGSAWSGRAQQGP
Trigger: TGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR CCA 90 bp TCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTaGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGC +
Preference number: 1 (lower is better)
Translates to: SFRELPSLAPRVRLE*ESPAGPRHALPAHG
Trigger: GCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR CCA 90 bp TCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTaGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCAC +
Preference number: 1 (lower is better)
Translates to: SALSGSFLHWPPGSA*SGRAQQGPGMRYQH
Trigger: GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR-3UTR GCA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACTGGCAGGGCCCGCCGTaGCCAGGGACTGCACGTTGC +
Preference number: 2 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHWQGPP*PGTARC
Trigger: GCAACGTGCAGTCCCTGGGCACGGCGGGCCCTGCCA...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR-3UTR TCA 90 bp AGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGGCCATCTCACTGGCTaGGAGCCCGGCCCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: SGRAQQGPGMRYQHMAGPGHLTG*EPGPSC
Trigger: GCAGCTGGGGCCGGGCTCTCAGCCAGTGAGATGGCC...GGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR-3UTR GCA 90 bp CGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCACCAGGGACTGCACGTTaGGGAGGGCAGGGCGGACAC +
Preference number: 2 (lower is better)
Translates to: RELPSLAPRVRLEWESPAPGTAR*GGQGGH
Trigger: GTGTCCGCCCTGCCCTCCGCAACGTGCAGTCCCTGG...TGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR-3UTR CCA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACGGCTGGCCATCTCACTaGCTGAGAGCCCGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHGWPSH*LRARPQ
Trigger: CTGGGGCCGGGCTCTCAGCCAGTGAGATGGCCAGCC...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR-3UTR TCA 90 bp CAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCGGCCATCTCACTGGCTaGGAGCCCGGCCCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: QPPTRSPSALSGSFLHWPGHLTG*EPGPSC
Trigger: GCAGCTGGGGCCGGGCTCTCAGCCAGTGAGATGGCC...GGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR-3UTR CCA 90 bp CAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCAGGGTCCGCCTGGAGTaGGAGAGCCCAGCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: QPPTRSPSALSGSFLHWPRVRLE*ESPAGP
Trigger: GGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCCT...GGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR-3UTR CCA 90 bp GAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGCAGAACTTACGTGGTGTaGCAGCAGGAGGGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: EPSRAQACVTSTWQGPPCRTYVV*QQEGAG
Trigger: GCCAGCCCCCTCCTGCTGCCACACCACGTAAGTTCT...GCACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR-3UTR GCA 90 bp GAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGCTCACACAGCCCTGTCTaGACACATCCCCGAGGTTGG +
Preference number: 2 (lower is better)
Translates to: EPSRAQACVTSTWQGPPCSHSPV*THPRGW
Trigger: CCAACCTCGGGGATGTGTGCAGACAGGGCTGTGTGA...GCACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR-3UTR CCA 90 bp GGGGACGTTAGGGCTCGTCAGCTGGGCCACAGCATCTCACAGATGAGGAGACCGGGCTGGCCATCTCACTaGCTGAGAGCCCGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: GDVRARQLGHSISQMRRPGWPSH*LRARPQ
Trigger: CTGGGGCCGGGCTCTCAGCCAGTGAGATGGCCAGCC...CGGTCTCCTCATCTGTGAGATGCTGTGGCCCAGCTGACGAGCCCTAACGTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR-3UTR CCA 90 bp AGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCAACAGGGCCCAGCTGTaGTCACACAGCCCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: SGRAQQGPGMRYQHMAGPNRAQL*SHSPVC
Trigger: GCAGACAGGGCTGTGTGACCACAGCTGGGCCCTGTT...GGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR-3UTR GCA 90 bp CCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGAGCAGGGCCCAGGCATaGGTTACCAGCACATGGCAG +
Preference number: 2 (lower is better)
Translates to: PTRSPSALSGSFLHWPPGSRAQA*VTSTWQ
Trigger: CTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCT...CCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR-3UTR CCA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACTTAGGGCTCGTCAGCTaGGCCACAGCATCTCACAGA +
Preference number: 2 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHLGLVS*ATASHR
Trigger: TCTGTGAGATGCTGTGGCCCAGCTGACGAGCCCTAA...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR-3UTR CCA 90 bp GGGGACGTTAGGGCTCGTCAGCTGGGCCACAGCATCTCACAGATGAGGAGACCGGCAGCAGGAGGGGGCTaGCCATCTCACTGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: GDVRARQLGHSISQMRRPAAGGG*PSHWLR
Trigger: TCTCAGCCAGTGAGATGGCCAGCCCCCTCCTGCTGC...CGGTCTCCTCATCTGTGAGATGCTGTGGCCCAGCTGACGAGCCCTAACGTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR-3UTR CCA 90 bp TACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCAGAACTTACGTGGTGTaGCAGCAGGAGGGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: YPLSLCSFRELPSLAPRVRTYVV*QQEGAG
Trigger: GCCAGCCCCCTCCTGCTGCCACACCACGTAAGTTCT...GACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR-3UTR CCA 90 bp TACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCAACAGGGCCCAGCTGTaGTCACACAGCCCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: YPLSLCSFRELPSLAPRVNRAQL*SHSPVC
Trigger: GCAGACAGGGCTGTGTGACCACAGCTGGGCCCTGTT...GACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR-3UTR CCA 90 bp CAGGGACTGCACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGTTAGGGCTCGTCAGCTaGGCCACAGCATCTCACAGA +
Preference number: 2 (lower is better)
Translates to: QGLHVAEGRADTVLIGTRLGLVS*ATASHR
Trigger: TCTGTGAGATGCTGTGGCCCAGCTGACGAGCCCTAA...CCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTGCAGTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR CCA 72 bp GAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATaGCAGGGCCCGCCGTGCCCAGGGACTGCACGTTGC +
Preference number: 3 (lower is better)
Translates to: EPSRAQACVTST*QGPPCPGTARC
Trigger: GCAACGTGCAGTCCCTGGGCACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR CCA 72 bp GAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTaGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCA +
Preference number: 3 (lower is better)
Translates to: ELPSLAPRVRLE*ESPAGPRHALP
Trigger: TGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR-3UTR CAA 90 bp CAGGGACTGCACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGCACACATCCCCGAGGTaGGGACTGAGAACTTACGTG +
Preference number: 3 (lower is better)
Translates to: QGLHVAEGRADTVLIGTRHTSPR*GLRTYV
Trigger: CACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTG...CCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTGCAGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR TCA 72 bp CACAGCCCTGTCTGCACACATCCCCGAGGTTGGGACTaGGAACTTACGTGGTGTGGCAGCAGGAGGGGGCTG +
Preference number: 3 (lower is better)
Translates to: HSPVCTHPRGWD*ELTWCGSRRGL
Trigger: CAGCCCCCTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAGGGCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR-3UTR CAA 90 bp GGGGACGTTAGGGCTCGTCAGCTGGGCCACAGCATCTCACAGATGAGGAGACCGCACACATCCCCGAGGTaGGGACTGAGAACTTACGTG +
Preference number: 3 (lower is better)
Translates to: GDVRARQLGHSISQMRRPHTSPR*GLRTYV
Trigger: CACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTG...CGGTCTCCTCATCTGTGAGATGCTGTGGCCCAGCTGACGAGCCCTAACGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGCCAGTGGAGGGCGGGCTaGGGGCCTCAGTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: EPSRAQACVTSTWQGPPCQWRAG*GPQWPA
Trigger: AGCCGGCCACTGAGGCCCCCAGCCCGCCCTCCACTG...GCACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp GGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCCAGGGCTGGCCAGTGTaGCGTGGCTCTCGCGCACCC +
Preference number: 4 (lower is better)
Translates to: GRAQQGPGMRYQHMAGPAQGWPV*RGSRAP
Trigger: GGGTGCGCGAGAGCCACGTCACACTGGCCAGCCCTG...GGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp GCAGCAGGAGGGGGCTGGCCATCTCACTGGCTGAGAGCCCGGCCCCAGCTGCCCGGCATGTGCCCCCATTaGGGCAGGTGGACGGTGGGC +
Preference number: 4 (lower is better)
Translates to: AAGGGWPSHWLRARPQLPGMCPH*GRWTVG
Trigger: GCCCACCGTCCACCTGCCTCAATGGGGGCACATGCC...GGGCAGCTGGGGCCGGGCTCTCAGCCAGTGAGATGGCCAGCCCCCTCCTGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp GGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCCCAGGGCGGGCGCAATaGGGAGCGGCAGGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: GRAQQGPGMRYQHMAGPAPGRAQ*GAAGCP
Trigger: AGGGCAACCTGCCGCTCCTCATTGCGCCCGCCCTGG...GGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp GAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGCGGCCATCTCACTGGCTaGGAGCCCGGCCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EPSRAQACVTSTWQGPPCGHLTG*EPGPSC
Trigger: GCAGCTGGGGCCGGGCTCTCAGCCAGTGAGATGGCC...GCACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp GAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGCGCCGTGCCCAGGGACTaGACGTTGCGGAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: EPSRAQACVTSTWQGPPCAVPRD*TLRRAG
Trigger: CCCTGCCCTCCGCAACGTGCAGTCCCTGGGCACGGC...GCACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCGCACTGGCAGCCGGATaGGCAGCCCTGCACCCCAGG +
Preference number: 4 (lower is better)
Translates to: ASFTGPQGPPGVGEPSRAALAAG*AALHPR
Trigger: CCTGGGGTGCAGGGCTGCCCATCCGGCTGCCAGTGC...GGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGCCCCCACCGTGTCGGGTaGCACGTCTCGGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: EPSRAQACVTSTWQGPPCPHRVG*HVSGHR
Trigger: ACGGTGCCCCGAGACGTGCCACCCGACACGGTGGGG...GCACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp AGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGCAGTGGAGGGCGGGCTaGGGGCCTCAGTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: RAQQGPGMRYQHMAGPAVQWRAG*GPQWPA
Trigger: AGCCGGCCACTGAGGCCCCCAGCCCGCCCTCCACTG...CACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGCACGGCTGGGGGTGTATaGGCCTCCCCGCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: EPSRAQACVTSTWQGPPCTAGGV*ASPQAS
Trigger: GGAGGCCTGCGGGGAGGCCCATACACCCCCAGCCGT...GCACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GCAGCAGGAGGGGGCTGGCCATCTCACTGGCTGAGAGCCCGGCCCCAGCTGCCCGCGGGCCTGGGTGACTaGGGCGTGGTTGGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: AAGGGWPSHWLRARPQLPAGLGD*GVVGVD
Trigger: GTCCACTCCAACCACGCCCCAGTCACCCAGGCCCGC...GGGCAGCTGGGGCCGGGCTCTCAGCCAGTGAGATGGCCAGCCCCCTCCTGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp GCAGCAGGAGGGGGCTGGCCATCTCACTGGCTGAGAGCCCGGCCCCAGCTGCCCGGAGGCTGTTGTGGCTaGGGTCCAGCAGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: AAGGGWPSHWLRARPQLPGGCCG*GPAAAG
Trigger: GCCTGCTGCTGCTGGACCTCAGCCACAACAGCCTCC...GGGCAGCTGGGGCCGGGCTCTCAGCCAGTGAGATGGCCAGCCCCCTCCTGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp TCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCTGGCCAGTGTaGCGTGGCTCTCGCGCACCC +
Preference number: 4 (lower is better)
Translates to: SGSFLHWPPGSAWSGRAQQGWPV*RGSRAP
Trigger: GGGTGCGCGAGAGCCACGTCACACTGGCCAGCCCTG...CTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp AGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGCCTCGCGGGCCTGGGTaGCTGGGGCGTGGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: RAQQGPGMRYQHMAGPAVPRGPG*LGRGWS
Trigger: ACTCCAACCACGCCCCAGTCACCCAGGCCCGCGAGG...CACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp AGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGGGCAATGCGGGTGTTaGCGGCCAGCCGCAGGCGCG +
Preference number: 4 (lower is better)
Translates to: SGRAQQGPGMRYQHMAGPGQCGC*RPAAGA
Trigger: CGCGCCTGCGGCTGGCCGGCAACACCCGCATTGCCC...GGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp GGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGGCTCACCGGCTCGATaGCCAGGGTCAGGGACCGTG +
Preference number: 4 (lower is better)
Translates to: GRAQQGPGMRYQHMAGPAGSPAR*PGSGTV
Trigger: CACGGTCCCTGACCCTGGGCATCGAGCCGGTGAGCC...GGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACCCGCACACAGTAGGCTaGCCCCACCGCAGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHPHTVG*PHRSQR
Trigger: GCGCTGGCTGCGGTGGGGGCAGCCTACTGTGTGCGG...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp GGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCCCAGGGACTGCACGTTaGGGAGGGCAGGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: GRAQQGPGMRYQHMAGPAPGTAR*GGQGGH
Trigger: GTGTCCGCCCTGCCCTCCGCAACGTGCAGTCCCTGG...GGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp TCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGTGGCAGGGCCCGCCGTaGCCAGGGACTGCACGTTGC +
Preference number: 4 (lower is better)
Translates to: SGSFLHWPPGSAWSGRAQWQGPP*PGTARC
Trigger: GCAACGTGCAGTCCCTGGGCACGGCGGGCCCTGCCA...CTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp AGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCCGTCTCGGGGCACCGTaGTCCCCTGGCGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SGRAQQGPGMRYQHMAGPRLGAP*SPGGQC
Trigger: GCACTGCCCGCCAGGGGACCACGGTGCCCCGAGACG...GGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GCAGCAGGAGGGGGCTGGCCATCTCACTGGCTGAGAGCCCGGCCCCAGCTGCCCGCTGAGGTTGGCGAGTaGCTGGAAGACCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: AAGGGWPSHWLRARPQLPAEVGE*LEDPAG
Trigger: CCCAGCGGGGTCTTCCAGCCACTCGCCAACCTCAGC...GGGCAGCTGGGGCCGGGCTCTCAGCCAGTGAGATGGCCAGCCCCCTCCTGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCGGGCAGTCCTGGGGCTaGGGGACAGGCCCTACAGTC +
Preference number: 4 (lower is better)
Translates to: ASFTGPQGPPGVGEPSRAGQSWG*GTGPTV
Trigger: GACTGTAGGGCCTGTCCCCCAGCCCCAGGACTGCCC...GGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCACCACGCGCAGGGAGGTaGGGCTCACCGGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: RELPSLAPRVRLEWESPAPRAGR*GSPARC
Trigger: GCATCGAGCCGGTGAGCCCCACCTCCCTGCGCGTGG...TGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp GAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGCGGTTGCGCAAGCGGCTaGAGAGCCCCTCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: EPSRAQACVTSTWQGPPCGCASG*RAPRPA
Trigger: AGCTGGACGAGGGGCTCTTCAGCCGCTTGCGCAACC...GCACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACGGCATGTGCCCCCATTaGGGCAGGTGGACGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHGMCPH*GRWTVG
Trigger: GCCCACCGTCCACCTGCCTCAATGGGGGCACATGCC...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp AGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCGCAGCGGGGGCAGTaGCCGCAGCTCGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SGRAQQGPGMRYQHMAGPAQRGQ*PQLVVL
Trigger: CAGGACAACGAGCTGCGGGCACTGCCCCCGCTGCGC...GGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp CGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCAAGCCCCTCGTCCAGCTaGTGCAGCCCCAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: RELPSLAPRVRLEWESPASPSSS*CSPRPA
Trigger: GGCTGGTCTGGGGCTGCAGCAGCTGGACGAGGGGCT...TGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp AGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGCAGCTGGGCAATaGGGGTGTTGCCGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SGRAQQGPGMRYQHMAGPAAAGQ*GCCRPA
Trigger: GGCTGGCCGGCAACACCCGCATTGCCCAGCTGCGGC...GGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp CGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCACTCACATCCAGCTCCTaGAGGGCAGCCAGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: RELPSLAPRVRLEWESPALTSSS*RAARPA
Trigger: GGCCGGCCTGGCTGCCCTGCAGGAGCTGGATGTGAG...TGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp GCCGCCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCCCGCACACAGTAGGCTaGCCCCACCGCAGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: AAYPLSLCSFRELPSLAPPHTVG*PHRSQR
Trigger: GCGCTGGCTGCGGTGGGGGCAGCCTACTGTGTGCGG...GGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGGCGGC
70% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACTTTGTCCTGAGCCGCTaGTGCCATGGCCCGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHFVLSR*CHGPPP
Trigger: CGGGGGCGGGCCATGGCAGCAGCGGCTCAGGACAAA...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp TCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGGGCCCGAGGGGGTCCTaGGTCCCGAAGCAACTGCGT +
Preference number: 4 (lower is better)
Translates to: SGSFLHWPPGSAWSGRAQGPRGS*VPKQLR
Trigger: ACGCAGTTGCTTCGGGACCCAGGACCCCCTCGGGCC...CTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp AGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGGCCTCAGTCTTTCCTaGCGGGTCGGGCCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: SGRAQQGPGMRYQHMAGPGLSLS*RVGPEG
Trigger: CCCCTCGGGCCCGACCCGCCAGGAAAGACTGAGGCC...GGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp TCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGTGTGGCTGGCTGCACTaGCAGCCGGATGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SGSFLHWPPGSAWSGRAQCGWLH*QPDGQP
Trigger: GGGCTGCCCATCCGGCTGCCAGTGCAGCCAGCCACA...CTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCGGCACCGTGGTCCCCTaGCGGGCAGTGCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: ASFTGPQGPPGVGEPSRAGTVVP*RAVQKT
Trigger: AGTCTTCTGCACTGCCCGCCAGGGGACCACGGTGCC...GGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACCACACTCAGACCCGCTaGGCAGGGCCTCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHHTQTR*AGPLHR
Trigger: GCGGTGGAGAGGCCCTGCCCAGCGGGTCTGAGTGTG...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp AGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCTGGGCCGCAGCTGGGTaGCCGTGTACTCAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: SGRAQQGPGMRYQHMAGPWAAAG*PCTQRA
Trigger: CGCTCGCTGAGTACACGGTCACCCAGCTGCGGCCCA...GGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp CAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCTCGCGGGCCTGGGTaGCTGGGGCGTGGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: QPPTRSPSALSGSFLHWPPRGPG*LGRGWS
Trigger: ACTCCAACCACGCCCCAGTCACCCAGGCCCGCGAGG...GGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACACCTGCCCTTTGTCCTaGGCCGCTGCTGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHTCPLS*AAAAMA
Trigger: GGCCATGGCAGCAGCGGCTCAGGACAAAGGGCAGGT...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp TCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGGCGCAGCGGGGGCAGTaGCCGCAGCTCGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SPSALSGSFLHWPPGSAWAQRGQ*PQLVVL
Trigger: CAGGACAACGAGCTGCGGGCACTGCCCCCGCTGCGC...CCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp AGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCCGGAGGCTCCTGAGCTaGACGGAGCTCCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SGRAQQGPGMRYQHMAGPRRLLS*TELPWR
Trigger: CCTCCAGGGGAGCTCCGTGCAGCTCAGGAGCCTCCG...GGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp AGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCTTTGTCCTGAGCCGCTaGTGCCATGGCCCGCCCCCG +
Preference number: 4 (lower is better)
Translates to: SGRAQQGPGMRYQHMAGPFVLSR*CHGPPP
Trigger: CGGGGGCGGGCCATGGCAGCAGCGGCTCAGGACAAA...GGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGGGCCTCAGTCTTTCCTaGCGGGTCGGGCCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: PTRSPSALSGSFLHWPPGGLSLS*RVGPEG
Trigger: CCCCTCGGGCCCGACCCGCCAGGAAAGACTGAGGCC...CCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACGCTGGAAGACCCCGCTaGGCAGGCTGGCGATCTGGT +
Preference number: 4 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHAGRPR*AGWRSG
Trigger: ACCAGATCGCCAGCCTGCCCAGCGGGGTCTTCCAGC...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCAGCTGAGGTTGGCGAGTaGCTGGAAGACCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: RELPSLAPRVRLEWESPAAEVGE*LEDPAG
Trigger: CCCAGCGGGGTCTTCCAGCCACTCGCCAACCTCAGC...TGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGCGCACCAGGCTGGATGTaGCGGATGCGGTTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: EPSRAQACVTSTWQGPPCAPGWM*RMRFLP
Trigger: GGGCAAGAACCGCATCCGCCACATCCAGCCTGGTGC...GCACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGCTTCTTGGGCGGGAAGTaGCAGCGCGTCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: EPSRAQACVTSTWQGPPCFLGGK*QRVSSG
Trigger: CCCTGAGGAGACGCGCTGCCACTTCCCGCCCAAGAA...GCACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CAGGGACTGCACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGGACGGTGGGCAGTCCTaGGGCTGGGGGACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: QGLHVAEGRADTVLIGTRDGGQS*GWGTGP
Trigger: AGGGCCTGTCCCCCAGCCCCAGGACTGCCCACCGTC...CCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTGCAGTCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp TCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGGGTCAGGGACCGTGGTaGCCTCGGCGTGACTGGTGT +
Preference number: 4 (lower is better)
Translates to: SGSFLHWPPGSAWSGRAQGQGPW*PRRDWC
Trigger: ACACCAGTCACGCCGAGGCCACCACGGTCCCTGACC...CTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGTCAGGGACCGTGGTaGCCTCGGCGTGACTGGTGT +
Preference number: 4 (lower is better)
Translates to: RELPSLAPRVRLEWESPAGQGPW*PRRDWC
Trigger: ACACCAGTCACGCCGAGGCCACCACGGTCCCTGACC...TGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GCCGCCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCCAGGGTCAGGGACCGTaGTGGCCTCGGCGTGACTGG +
Preference number: 4 (lower is better)
Translates to: AAYPLSLCSFRELPSLAPQGQGP*WPRRDW
Trigger: CCAGTCACGCCGAGGCCACCACGGTCCCTGACCCTG...GGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGGCGGC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CAGGGACTGCACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGACGGCTGGGGGTGTATaGGCCTCCCCGCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QGLHVAEGRADTVLIGTRTAGGV*ASPQAS
Trigger: GGAGGCCTGCGGGGAGGCCCATACACCCCCAGCCGT...CCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTGCAGTCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GCCGCCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCTTGCCCTCGCGGGCCTaGGTGACTGGGGCGTGGTTG +
Preference number: 4 (lower is better)
Translates to: AAYPLSLCSFRELPSLAPLPSRA*VTGAWL
Trigger: CAACCACGCCCCAGTCACCCAGGCCCGCGAGGGCAA...GGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGCAGCAGGAGGGGGCTaGCCATCTCACTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GRAQQGPGMRYQHMAGPAAAGGG*PSHWLR
Trigger: TCTCAGCCAGTGAGATGGCCAGCCCCCTCCTGCTGC...GGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp GAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGCGGCGATCTGGTTCTGTaGCAGGTCCAGGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: EPSRAQACVTSTWQGPPCGDLVL*QVQELQ
Trigger: CTGCAGCTCCTGGACCTGTCACAGAACCAGATCGCC...GCACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp AGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGGCCCTGGGAAGCCCATaGGTGGCACCTCACACTCAG +
Preference number: 4 (lower is better)
Translates to: RAQQGPGMRYQHMAGPAVALGSP*VAPHTQ
Trigger: CTGAGTGTGAGGTGCCACTCATGGGCTTCCCAGGGC...CACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp GCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCCCCGAGGTTGGGACTaGGAACTTACGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: ASFTGPQGPPGVGEPSRAPRGWD*ELTWCG
Trigger: GCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGG...GGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp TCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGGGGTCCCGAAGCAACTaGGTTCGAGTCCGCGTCCAC +
Preference number: 4 (lower is better)
Translates to: SGSFLHWPPGSAWSGRAQGSRSN*VRVRVH
Trigger: GTGGACGCGGACTCGAACGCAGTTGCTTCGGGACCC...CTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp TCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGGCCGGCAAAGCTGCCTaGGTCGAGCATGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: SGSFLHWPPGSAWSGRAQAGKAA*VEHGDA
Trigger: GGCATCACCATGCTCGACGCAGGCAGCTTTGCCGGC...CTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp CAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCTCACATCCAGCTCCTaGAGGGCAGCCAGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: QPPTRSPSALSGSFLHWPLTSSS*RAARPA
Trigger: GGCCGGCCTGGCTGCCCTGCAGGAGCTGGATGTGAG...GGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACTCCACCGCCCTCTGTTaGCTTCGGGCCTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHSTALC*LRAWLQ
Trigger: TTGGAGCCAGGCCCGAAGGCAACAGAGGGCGGTGGA...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp TACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCGCCGTGCCCAGGGACTaGACGTTGCGGAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: YPLSLCSFRELPSLAPRVAVPRD*TLRRAG
Trigger: CCCTGCCCTCCGCAACGTGCAGTCCCTGGGCACGGC...GACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CAGGGACTGCACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGTGTGGCTGGCTGCACTaGCAGCCGGATGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QGLHVAEGRADTVLIGTRCGWLH*QPDGQP
Trigger: GGGCTGCCCATCCGGCTGCCAGTGCAGCCAGCCACA...CCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTGCAGTCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACCCCCGCTGGGCAGGCTaGCGATCTGGTTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHPRWAG*RSGSVT
Trigger: TGTCACAGAACCAGATCGCCAGCCTGCCCAGCGGGG...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp AGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGGCACCAGGCTGGATGTaGCGGATGCGGTTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: RAQQGPGMRYQHMAGPAVAPGWM*RMRFLP
Trigger: GGGCAAGAACCGCATCCGCCACATCCAGCCTGGTGC...CACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GCCGCCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCGCAGCGCCTCCACGTTaGCAGTGTCCAGGATGCCGG +
Preference number: 4 (lower is better)
Translates to: AAYPLSLCSFRELPSLAPAAPPR*QCPGCR
Trigger: CCGGCATCCTGGACACTGCCAACGTGGAGGCGCTGC...GGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CAGGGACTGCACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGCTGGCCAGTGTGACGTaGCTCTCGCGCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: QGLHVAEGRADTVLIGTRLASVT*LSRTQG
Trigger: CCCCTGGGTGCGCGAGAGCCACGTCACACTGGCCAG...CCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTGCAGTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACTGGCTGTGGTGGTGGTaGCTGGGCAGCCAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHWLWWW*LGSQSR
Trigger: CCGACTTTGGCTGCCCAGCCACCACCACCACAGCCA...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACTGCCGTGTCCCCAGGTaGCATGTGCCCCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHCRVPR*HVPPLR
Trigger: CCTCAATGGGGGCACATGCCACCTGGGGACACGGCA...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp AGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCTGGCCTCGGCGTGACTaGTGTAGGGCTGGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: SGRAQQGPGMRYQHMAGPWPRRD*CRAGPC
Trigger: ACACGGCCCAGCCCTACACCAGTCACGCCGAGGCCA...GGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGTTCTGGGGACCACGCGCAGGGAGGTaGGGCTCACCGGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: HVAEGRADTVLIGTRFWGPRAGR*GSPARC
Trigger: GCATCGAGCCGGTGAGCCCCACCTCCCTGCGCGTGG...TCCCCAGAACCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACCACAGACGGAGTAAGTaGCGTTGGGCCGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHHRRSK*RWAAAG
Trigger: CCCAGCTGCGGCCCAACGCCACTTACTCCGTCTGTG...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp AGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGTTGGAGTGGACGGCTaGGGGTGTATGGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: SGRAQQGPGMRYQHMAGPVGVDG*GCMGLP
Trigger: GGGGAGGCCCATACACCCCCAGCCGTCCACTCCAAC...GGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGCACACTCAGACCCGCTaGGCAGGGCCTCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: PTRSPSALSGSFLHWPPGHTQTR*AGPLHR
Trigger: GCGGTGGAGAGGCCCTGCCCAGCGGGTCTGAGTGTG...CCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCGGCTGGCCATCTCACTaGCTGAGAGCCCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: QPPTRSPSALSGSFLHWPGWPSH*LRARPQ
Trigger: CTGGGGCCGGGCTCTCAGCCAGTGAGATGGCCAGCC...GGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CAGGGACTGCACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGGGCTGGCCATCTCACTaGCTGAGAGCCCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: QGLHVAEGRADTVLIGTRGWPSH*LRARPQ
Trigger: CTGGGGCCGGGCTCTCAGCCAGTGAGATGGCCAGCC...CCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTGCAGTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACGCAGCAGGAGGGGGCTaGCCATCTCACTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHAAGGG*PSHWLR
Trigger: TCTCAGCCAGTGAGATGGCCAGCCCCCTCCTGCTGC...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCAACAGGGCCCAGCTGTaGTCACACAGCCCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: ASFTGPQGPPGVGEPSRANRAQL*SHSPVC
Trigger: GCAGACAGGGCTGTGTGACCACAGCTGGGCCCTGTT...GGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp GCCGCCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCCGTTGTCCTGCAGCTTaGGCTCCAGGAGGCGGTCGA +
Preference number: 4 (lower is better)
Translates to: AAYPLSLCSFRELPSLAPRCPAA*APGGGR
Trigger: TCGACCGCCTCCTGGAGCTCAAGCTGCAGGACAACG...GGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGGCGGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp TCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCGGGCCCCAAAGGCATaGCACAGACGGAGTAAGTGG +
Preference number: 4 (lower is better)
Translates to: SGSFLHWPPGSAWSGRAQRAPKA*HRRSKW
Trigger: CCACTTACTCCGTCTGTGTCATGCCTTTGGGGCCCG...CTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACCGCAGCTCGTTGTCCTaGAGCTTGAGCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHRSSLS*SLSSRR
Trigger: CCTCCTGGAGCTCAAGCTGCAGGACAACGAGCTGCG...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp GGGGCCAAGACTAGAGTCACACAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCGCCGCAGCTGGGCAATaGGGGTGTTGCCGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GAKTRVTQPPTRSPSALSAAAGQ*GCCRPA
Trigger: GGCTGGCCGGCAACACCCGCATTGCCCAGCTGCGGC...GGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTGTGTGACTCTAGTCTTGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp AGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGTCGCCAGGCAGGGCCTaGAGGCTTAGGTTGCTCACA +
Preference number: 4 (lower is better)
Translates to: RAQQGPGMRYQHMAGPAVSPGRA*RLRLLT
Trigger: TGTGAGCAACCTAAGCCTGCAGGCCCTGCCTGGCGA...CACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp TCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGCTGGGCCGTGTCCCCTaGCCCATCTGGCTCTCACAG +
Preference number: 4 (lower is better)
Translates to: SPSALSGSFLHWPPGSAWLGRVP*PIWLSQ
Trigger: CTGTGAGAGCCAGATGGGGCAGGGGACACGGCCCAG...CCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp TACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGGAGGCTCCTGAGCTaGACGGAGCTCCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: YPLSLCSFRELPSLAPRVRRLLS*TELPWR
Trigger: CCTCCAGGGGAGCTCCGTGCAGCTCAGGAGCCTCCG...GACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp CAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCGAGCCCGGCCCCAGCTaGCCTGTCTCTCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: QPPTRSPSALSGSFLHWPEPGPS*PVSLWL
Trigger: AAGCCAGAGAGAGACAGGGCAGCTGGGGCCGGGCTC...GGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp TCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGAGCAGGGCCCAGGCATaGGTTACCAGCACATGGCAG +
Preference number: 4 (lower is better)
Translates to: SGSFLHWPPGSAWSGRAQSRAQA*VTSTWQ
Trigger: CTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCT...CTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GGGGCCAAGACTAGAGTCACACAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCCCCCACCGTGTCGGGTaGCACGTCTCGGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: GAKTRVTQPPTRSPSALSPHRVG*HVSGHR
Trigger: ACGGTGCCCCGAGACGTGCCACCCGACACGGTGGGG...GGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTGTGTGACTCTAGTCTTGGCCCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGCAGGCTGGCGATCTaGTTCTGTGACAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RELPSLAPRVRLEWESPAGRLAI*FCDRSR
Trigger: CCTGGACCTGTCACAGAACCAGATCGCCAGCCTGCC...TGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCAGCCTCGGATCACAGGTaGCACTCGCTCCAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: RELPSLAPRVRLEWESPAASDHR*HSLQLV
Trigger: AACCAGCTGGAGCGAGTGCCACCTGTGATCCGAGGC...TGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp AGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCTGGCTGTGGTGGTGGTaGCTGGGCAGCCAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: SGRAQQGPGMRYQHMAGPWLWWW*LGSQSR
Trigger: CCGACTTTGGCTGCCCAGCCACCACCACCACAGCCA...GGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTGGCCTCGGCGTGACTaGTGTAGGGCTGGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: PTRSPSALSGSFLHWPPGWPRRD*CRAGPC
Trigger: ACACGGCCCAGCCCTACACCAGTCACGCCGAGGCCA...CCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp TCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGTGTTGCCTTCGGGCCTaGCTCCAAGGGGACCTTCAC +
Preference number: 4 (lower is better)
Translates to: SGSFLHWPPGSAWSGRAQCCLRA*LQGDLH
Trigger: GTGAAGGTCCCCTTGGAGCCAGGCCCGAAGGCAACA...CTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp TCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGCGTTGTCCTGCAGCTTaGGCTCCAGGAGGCGGTCGA +
Preference number: 4 (lower is better)
Translates to: SPSALSGSFLHWPPGSAWRCPAA*APGGGR
Trigger: TCGACCGCCTCCTGGAGCTCAAGCTGCAGGACAACG...CCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp GGGGACGTTAGGGCTCGTCAGCTGGGCCACAGCATCTCACAGATGAGGAGACCGTGGGCCGCAGCTGGGTaGCCGTGTACTCAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: GDVRARQLGHSISQMRRPWAAAG*PCTQRA
Trigger: CGCTCGCTGAGTACACGGTCACCCAGCTGCGGCCCA...CGGTCTCCTCATCTGTGAGATGCTGTGGCCCAGCTGACGAGCCCTAACGTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACGCTGGATGTGGCGGATaGGGTTCTTGCCCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHAGCGG*GSCPGR
Trigger: TCTACCTGGGCAAGAACCGCATCCGCCACATCCAGC...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp CCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCACCGCCCTCTGTTaGCTTCGGGCCTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: PTRSPSALSGSFLHWPPGSTALC*LRAWLQ
Trigger: TTGGAGCCAGGCCCGAAGGCAACAGAGGGCGGTGGA...CCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp AGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGTCACACAGCCCTGTCTaGACACATCCCCGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: RAQQGPGMRYQHMAGPAVSHSPV*THPRGW
Trigger: CCAACCTCGGGGATGTGTGCAGACAGGGCTGTGTGA...CACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp AGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGAAGACTGTCTGTGGCTaGCTGCACTGGCAGCCGGAT +
Preference number: 4 (lower is better)
Translates to: RAQQGPGMRYQHMAGPAVKTVCG*LHWQPD
Trigger: ATCCGGCTGCCAGTGCAGCCAGCCACAGACAGTCTT...CACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGCCCCGCTGGGCAGGCTaGCGATCTGGTTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: PTRSPSALSGSFLHWPPGPRWAG*RSGSVT
Trigger: TGTCACAGAACCAGATCGCCAGCCTGCCCAGCGGGG...CCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGTTCTGGGGAGCTGGAAGACCCCGCTaGGCAGGCTGGCGATCTGGT +
Preference number: 4 (lower is better)
Translates to: HVAEGRADTVLIGTRFWGAGRPR*AGWRSG
Trigger: ACCAGATCGCCAGCCTGCCCAGCGGGGTCTTCCAGC...TCCCCAGAACCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGTTCTGGGGAAGGTTGGCGAGTGGCTaGAAGACCCCGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HVAEGRADTVLIGTRFWGRLASG*KTPLGR
Trigger: CCTGCCCAGCGGGGTCTTCCAGCCACTCGCCAACCT...TCCCCAGAACCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CAGGGACTGCACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGTGCCGTGTCCCCAGGTaGCATGTGCCCCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: QGLHVAEGRADTVLIGTRCRVPR*HVPPLR
Trigger: CCTCAATGGGGGCACATGCCACCTGGGGACACGGCA...CCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTGCAGTCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGTTCTGGGGACACAAGCACGCCAGGTaGTGCCGTGTCCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: HVAEGRADTVLIGTRFWGHKHAR*CRVPRW
Trigger: CCACCTGGGGACACGGCACCACCTGGCGTGCTTGTG...TCCCCAGAACCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CAGGGACTGCACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGGTCCCCTGCCCCATCTaGCTCTCACAGTACAGGCCC +
Preference number: 4 (lower is better)
Translates to: QGLHVAEGRADTVLIGTRVPCPI*LSQYRP
Trigger: GGGCCTGTACTGTGAGAGCCAGATGGGGCAGGGGAC...CCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTGCAGTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp TACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCGCGTTGGGCCGCAGCTaGGTGACCGTGTACTCAGCG +
Preference number: 4 (lower is better)
Translates to: YPLSLCSFRELPSLAPRVALGRS*VTVYSA
Trigger: CGCTGAGTACACGGTCACCCAGCTGCGGCCCAACGC...GACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGCACAGACGGAGTAAGTaGCGTTGGGCCGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PTRSPSALSGSFLHWPPGHRRSK*RWAAAG
Trigger: CCCAGCTGCGGCCCAACGCCACTTACTCCGTCTGTG...CCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp AGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCAGAACTTACGTGGTGTaGCAGCAGGAGGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SGRAQQGPGMRYQHMAGPRTYVV*QQEGAG
Trigger: GCCAGCCCCCTCCTGCTGCCACACCACGTAAGTTCT...GGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp ACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGGGGGCTAGGGTCCGCCTGGAGTaGGAGAGCCCAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TSPRLGLRTYVVWQQEGARVRLE*ESPAGP
Trigger: GGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCCT...AGCCCCCTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACCTGCGTCGAGCATGGTaGTGCCGTTCTCAAAGACGT +
Preference number: 4 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHLRRAW*CRSQRR
Trigger: ACGTCTTTGAGAACGGCATCACCATGCTCGACGCAG...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp GGGGACGTTAGGGCTCGTCAGCTGGGCCACAGCATCTCACAGATGAGGAGACCGGGAGGCTGTTGTGGCTaGGGTCCAGCAGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GDVRARQLGHSISQMRRPGGCCG*GPAAAG
Trigger: GCCTGCTGCTGCTGGACCTCAGCCACAACAGCCTCC...CGGTCTCCTCATCTGTGAGATGCTGTGGCCCAGCTGACGAGCCCTAACGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp GGGGCCAAGACTAGAGTCACACAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCGGTTGCGCAAGCGGCTaGAGAGCCCCTCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GAKTRVTQPPTRSPSALSGCASG*RAPRPA
Trigger: AGCTGGACGAGGGGCTCTTCAGCCGCTTGCGCAACC...GGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTGTGTGACTCTAGTCTTGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp CTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGCCAGGGCGGGCGCAATaGGGAGCGGCAGGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LHTSPRLGLRTYVVWQQEPGRAQ*GAAGCP
Trigger: AGGGCAACCTGCCGCTCCTCATTGCGCCCGCCCTGG...CTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp CACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGTTCTGGGGAGCCCTGGGAAGCCCATaGGTGGCACCTCACACTCAG +
Preference number: 4 (lower is better)
Translates to: HVAEGRADTVLIGTRFWGALGSP*VAPHTQ
Trigger: CTGAGTGTGAGGTGCCACTCATGGGCTTCCCAGGGC...TCCCCAGAACCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp GCCGCCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCGCTGGATGTGGCGGATaGGGTTCTTGCCCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: AAYPLSLCSFRELPSLAPAGCGG*GSCPGR
Trigger: TCTACCTGGGCAAGAACCGCATCCGCCACATCCAGC...GGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp CTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGGCAATGCGGGTGTTaGCGGCCAGCCGCAGGCGCG +
Preference number: 4 (lower is better)
Translates to: LSAHIPEVGTENLRGVAAGQCGC*RPAAGA
Trigger: CGCGCCTGCGGCTGGCCGGCAACACCCGCATTGCCC...TGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp CAGGGACTGCACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGTCGCCAGGCAGGGCCTaGAGGCTTAGGTTGCTCACA +
Preference number: 4 (lower is better)
Translates to: QGLHVAEGRADTVLIGTRSPGRA*RLRLLT
Trigger: TGTGAGCAACCTAAGCCTGCAGGCCCTGCCTGGCGA...CCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTGCAGTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp AGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCAAGACTGTCTGTGGCTaGCTGCACTGGCAGCCGGAT +
Preference number: 4 (lower is better)
Translates to: SGRAQQGPGMRYQHMAGPKTVCG*LHWQPD
Trigger: ATCCGGCTGCCAGTGCAGCCAGCCACAGACAGTCTT...GGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCACGTCTCGGGGCACCGTaGTCCCCTGGCGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LSAHIPEVGTENLRGVAARLGAP*SPGGQC
Trigger: GCACTGCCCGCCAGGGGACCACGGTGCCCCGAGACG...TGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCGGCAGGCTGGCGATCTaGTTCTGTGACAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QPPTRSPSALSGSFLHWPGRLAI*FCDRSR
Trigger: CCTGGACCTGTCACAGAACCAGATCGCCAGCCTGCC...GGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GGGGCCAAGACTAGAGTCACACAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCAGGTTGGCGAGTGGCTaGAAGACCCCGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GAKTRVTQPPTRSPSALSRLASG*KTPLGR
Trigger: CCTGCCCAGCGGGGTCTTCCAGCCACTCGCCAACCT...GGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTGTGTGACTCTAGTCTTGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp TCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGTCGAAGGCACCAGGCTaGATGTGGCGGATGCGGTTC +
Preference number: 4 (lower is better)
Translates to: SPSALSGSFLHWPPGSAWSKAPG*MWRMRF
Trigger: GAACCGCATCCGCCACATCCAGCCTGGTGCCTTCGA...CCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGGACACATCCAGGTCGTaGAGGTTGCGCAAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: PTRSPSALSGSFLHWPPGDTSRS*RLRKRL
Trigger: CAGCCGCTTGCGCAACCTCCACGACCTGGATGTGTC...CCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CAGGGACTGCACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGGGCACTCGCTCCAGCTaGTTGTCGGACACATCCAGG +
Preference number: 4 (lower is better)
Translates to: QGLHVAEGRADTVLIGTRGTRSS*LSDTSR
Trigger: CCTGGATGTGTCCGACAACCAGCTGGAGCGAGTGCC...CCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTGCAGTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp ACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGGGGGCTTCCTCGGGCCGCAGCTaGGCAATGCGGGTGTTGCCG +
Preference number: 4 (lower is better)
Translates to: TSPRLGLRTYVVWQQEGASSGRS*AMRVLP
Trigger: CGGCAACACCCGCATTGCCCAGCTGCGGCCCGAGGA...AGCCCCCTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp ACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGGGGGCTCTGGCCAGTGTGACGTaGCTCTCGCGCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: TSPRLGLRTYVVWQQEGALASVT*LSRTQG
Trigger: CCCCTGGGTGCGCGAGAGCCACGTCACACTGGCCAG...AGCCCCCTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CCCTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGGCCGGCCAGCGTTCTTaGGCGGGAAGTGGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: PCLHTSPRLGLRTYVVWQAGQRS*AGSGSA
Trigger: CGCGCTGCCACTTCCCGCCCAAGAACGCTGGCCGGC...CTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCTGTGGCTGTGGTGGTaGTGGCTGGGCAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: QPPTRSPSALSGSFLHWPLWLWW*WLGSQS
Trigger: ACTTTGGCTGCCCAGCCACCACCACCACAGCCACAG...GGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp TCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGCTGTGGCTGTGGTGGTaGTGGCTGGGCAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SPSALSGSFLHWPPGSAWLWLWW*WLGSQS
Trigger: ACTTTGGCTGCCCAGCCACCACCACCACAGCCACAG...CCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGGACGGTGGGCAGTCCTaGGGCTGGGGGACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LHTSPRLGLRTYVVWQQEDGGQS*GWGTGP
Trigger: AGGGCCTGTCCCCCAGCCCCAGGACTGCCCACCGTC...CTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp ACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGGGGGCTGCGGGCCTGGGTGACTaGGGCGTGGTTGGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: TSPRLGLRTYVVWQQEGAAGLGD*GVVGVD
Trigger: GTCCACTCCAACCACGCCCCAGTCACCCAGGCCCGC...AGCCCCCTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GGGGCCAAGACTAGAGTCACACAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCTGCGTTACCAGCACATaGCAGGGCCCGCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GAKTRVTQPPTRSPSALSCVTST*QGPPCP
Trigger: TGGGCACGGCGGGCCCTGCCATGTGCTGGTAACGCA...GGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTGTGTGACTCTAGTCTTGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp AGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCCTGCGTCGAGCATGGTaGTGCCGTTCTCAAAGACGT +
Preference number: 4 (lower is better)
Translates to: SGRAQQGPGMRYQHMAGPLRRAW*CRSQRR
Trigger: ACGTCTTTGAGAACGGCATCACCATGCTCGACGCAG...GGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp GGGGACGTTAGGGCTCGTCAGCTGGGCCACAGCATCTCACAGATGAGGAGACCGGGGTCCCGAAGCAACTaGGTTCGAGTCCGCGTCCAC +
Preference number: 4 (lower is better)
Translates to: GDVRARQLGHSISQMRRPGSRSN*VRVRVH
Trigger: GTGGACGCGGACTCGAACGCAGTTGCTTCGGGACCC...CGGTCTCCTCATCTGTGAGATGCTGTGGCCCAGCTGACGAGCCCTAACGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp GGGGACGTTAGGGCTCGTCAGCTGGGCCACAGCATCTCACAGATGAGGAGACCGGCCGGCAAAGCTGCCTaGGTCGAGCATGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: GDVRARQLGHSISQMRRPAGKAA*VEHGDA
Trigger: GGCATCACCATGCTCGACGCAGGCAGCTTTGCCGGC...CGGTCTCCTCATCTGTGAGATGCTGTGGCCCAGCTGACGAGCCCTAACGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp GGGGACGTTAGGGCTCGTCAGCTGGGCCACAGCATCTCACAGATGAGGAGACCGGGCGGATGCGGTTCTTaGCCAGGTAGAGGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: GDVRARQLGHSISQMRRPGGCGS*PGRGAR
Trigger: TCGAGCGCCTCTACCTGGGCAAGAACCGCATCCGCC...CGGTCTCCTCATCTGTGAGATGCTGTGGCCCAGCTGACGAGCCCTAACGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp CCCTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGAGCCCCTCGTCCAGCTaGTGCAGCCCCAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: PCLHTSPRLGLRTYVVWQSPSSS*CSPRPA
Trigger: GGCTGGTCTGGGGCTGCAGCAGCTGGACGAGGGGCT...CTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp ACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGGGGGCTGAGCCCGGCCCCAGCTaGCCTGTCTCTCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: TSPRLGLRTYVVWQQEGAEPGPS*PVSLWL
Trigger: AAGCCAGAGAGAGACAGGGCAGCTGGGGCCGGGCTC...AGCCCCCTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp TCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGTCACACAGCCCTGTCTaGACACATCCCCGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SPSALSGSFLHWPPGSAWSHSPV*THPRGW
Trigger: CCAACCTCGGGGATGTGTGCAGACAGGGCTGTGTGA...CCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp CCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTACCCGCTCTCCCTCTaGTCTTTCCGGGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PTRSPSALSGSFLHWPPGYPLSL*SFRELP
Trigger: AGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTA...CCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp TCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGTTTCATGCAGCCTGTTaGCTGTCAGGTCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: SGSFLHWPPGSAWSGRAQFHAAC*LSGPGC
Trigger: GCAACCTGGACCTGACAGCCAACAGGCTGCATGAAA...CTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGCCGGCCAGCGTTCTTaGGCGGGAAGTGGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: LSAHIPEVGTENLRGVAAAGQRS*AGSGSA
Trigger: CGCGCTGCCACTTCCCGCCCAAGAACGCTGGCCGGC...TGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp ACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGGGGGCTCACAAGCACGCCAGGTaGTGCCGTGTCCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TSPRLGLRTYVVWQQEGAHKHAR*CRVPRW
Trigger: CCACCTGGGGACACGGCACCACCTGGCGTGCTTGTG...AGCCCCCTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp ACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGGGGGCTGCGTTGGGCCGCAGCTaGGTGACCGTGTACTCAGCG +
Preference number: 4 (lower is better)
Translates to: TSPRLGLRTYVVWQQEGAALGRS*VTVYSA
Trigger: CGCTGAGTACACGGTCACCCAGCTGCGGCCCAACGC...AGCCCCCTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGTTGCCCTCGCGGGCCTaGGTGACTGGGGCGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LHTSPRLGLRTYVVWQQELPSRA*VTGAWL
Trigger: CAACCACGCCCCAGTCACCCAGGCCCGCGAGGGCAA...CTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp ACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGGGGGCTCTGGAGGCCAGGCCCTaGGAAGCCCATGAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: TSPRLGLRTYVVWQQEGALEARP*EAHEWH
Trigger: GTGCCACTCATGGGCTTCCCAGGGCCTGGCCTCCAG...AGCCCCCTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp AGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCTTAGGGCTCGTCAGCTaGGCCACAGCATCTCACAGA +
Preference number: 4 (lower is better)
Translates to: SGRAQQGPGMRYQHMAGPLGLVS*ATASHR
Trigger: TCTGTGAGATGCTGTGGCCCAGCTGACGAGCCCTAA...GGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CACACAGCCCTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTAGGGTCCGCCTGGAGTaGGAGAGCCCAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: HTALSAHIPEVGTENLRGRVRLE*ESPAGP
Trigger: GGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCCT...ACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAGGGCTGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp GGGGACGTTAGGGCTCGTCAGCTGGGCCACAGCATCTCACAGATGAGGAGACCGCGCAGCTCGTTGTCCTaGAGCTTGAGCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GDVRARQLGHSISQMRRPRSSLS*SLSSRR
Trigger: CCTCCTGGAGCTCAAGCTGCAGGACAACGAGCTGCG...CGGTCTCCTCATCTGTGAGATGCTGTGGCCCAGCTGACGAGCCCTAACGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp CTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGCTGGGCCGTGTCCCCTaGCCCATCTGGCTCTCACAG +
Preference number: 4 (lower is better)
Translates to: LHTSPRLGLRTYVVWQQELGRVP*PIWLSQ
Trigger: CTGTGAGAGCCAGATGGGGCAGGGGACACGGCCCAG...CTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGCCCGAGGGGGTCCTaGGTCCCGAAGCAACTGCGT +
Preference number: 4 (lower is better)
Translates to: LSAHIPEVGTENLRGVAAGPRGS*VPKQLR
Trigger: ACGCAGTTGCTTCGGGACCCAGGACCCCCTCGGGCC...TGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CCCTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGGGCACCGTGGTCCCCTaGCGGGCAGTGCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: PCLHTSPRLGLRTYVVWQGTVVP*RAVQKT
Trigger: AGTCTTCTGCACTGCCCGCCAGGGGACCACGGTGCC...CTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CCCTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGGCAGCGCCTCCACGTTaGCAGTGTCCAGGATGCCGG +
Preference number: 4 (lower is better)
Translates to: PCLHTSPRLGLRTYVVWQAAPPR*QCPGCR
Trigger: CCGGCATCCTGGACACTGCCAACGTGGAGGCGCTGC...CTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CACACAGCCCTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTTCCTCGGGCCGCAGCTaGGCAATGCGGGTGTTGCCG +
Preference number: 4 (lower is better)
Translates to: HTALSAHIPEVGTENLRGSSGRS*AMRVLP
Trigger: CGGCAACACCCGCATTGCCCAGCTGCGGCCCGAGGA...ACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAGGGCTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GGGGACGTTAGGGCTCGTCAGCTGGGCCACAGCATCTCACAGATGAGGAGACCGTGTGGTGGTGGTGGCTaGGCAGCCAAAGTCGGCGTA +
Preference number: 4 (lower is better)
Translates to: GDVRARQLGHSISQMRRPCGGGG*AAKVGV
Trigger: TACGCCGACTTTGGCTGCCCAGCCACCACCACCACA...CGGTCTCCTCATCTGTGAGATGCTGTGGCCCAGCTGACGAGCCCTAACGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGGCAGTCCTGGGGCTaGGGGACAGGCCCTACAGTC +
Preference number: 4 (lower is better)
Translates to: LSAHIPEVGTENLRGVAAGQSWG*GTGPTV
Trigger: GACTGTAGGGCCTGTCCCCCAGCCCCAGGACTGCCC...TGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp ACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGGGGGCTGTCCCCTGCCCCATCTaGCTCTCACAGTACAGGCCC +
Preference number: 4 (lower is better)
Translates to: TSPRLGLRTYVVWQQEGAVPCPI*LSQYRP
Trigger: GGGCCTGTACTGTGAGAGCCAGATGGGGCAGGGGAC...AGCCCCCTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGGTTGGAGTGGACGGCTaGGGGTGTATGGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LHTSPRLGLRTYVVWQQEVGVDG*GCMGLP
Trigger: GGGGAGGCCCATACACCCCCAGCCGTCCACTCCAAC...CTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACTGCCCTGTCTCTCTCTaGCTTAGATGTAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHCPVSL*LRCRAL
Trigger: CAAAGCCCTACATCTAAGCCAGAGAGAGACAGGGCA...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp TCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGTGCCCTGTCTCTCTCTaGCTTAGATGTAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SGSFLHWPPGSAWSGRAQCPVSL*LRCRAL
Trigger: CAAAGCCCTACATCTAAGCCAGAGAGAGACAGGGCA...CTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GGGGCCAAGACTAGAGTCACACAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCAACAGGGCCCAGCTGTaGTCACACAGCCCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: GAKTRVTQPPTRSPSALSNRAQL*SHSPVC
Trigger: GCAGACAGGGCTGTGTGACCACAGCTGGGCCCTGTT...GGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTGTGTGACTCTAGTCTTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGTGCGTTACCAGCACATaGCAGGGCCCGCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LHTSPRLGLRTYVVWQQECVTST*QGPPCP
Trigger: TGGGCACGGCGGGCCCTGCCATGTGCTGGTAACGCA...CTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp CTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAACCTGCCCTTTGTCCTaGGCCGCTGCTGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: LSAHIPEVGTENLRGVAATCPLS*AAAAMA
Trigger: GGCCATGGCAGCAGCGGCTCAGGACAAAGGGCAGGT...TGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp ACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGGGGGCTCCCCGAGGTTGGGACTaGGAACTTACGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: TSPRLGLRTYVVWQQEGAPRGWD*ELTWCG
Trigger: GCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGG...AGCCCCCTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp CACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGTTCTGGGGACCTGCAGGCTTAGGTTaGTCACATCCAGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HVAEGRADTVLIGTRFWGPAGLG*SHPAPA
Trigger: TGCAGGAGCTGGATGTGAGCAACCTAAGCCTGCAGG...TCCCCAGAACCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CCCTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGTTCTTGGGCGGGAAGTaGCAGCGCGTCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PCLHTSPRLGLRTYVVWQFLGGK*QRVSSG
Trigger: CCCTGAGGAGACGCGCTGCCACTTCCCGCCCAAGAA...CTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp ACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGGGGGCTTGTGGTGGTGGTGGCTaGGCAGCCAAAGTCGGCGTA +
Preference number: 4 (lower is better)
Translates to: TSPRLGLRTYVVWQQEGACGGGG*AAKVGV
Trigger: TACGCCGACTTTGGCTGCCCAGCCACCACCACCACA...AGCCCCCTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GGGGACGTTAGGGCTCGTCAGCTGGGCCACAGCATCTCACAGATGAGGAGACCGTGGGAAGCCCATGAGTaGCACCTCACACTCAGACCC +
Preference number: 4 (lower is better)
Translates to: GDVRARQLGHSISQMRRPWEAHE*HLTLRP
Trigger: GGGTCTGAGTGTGAGGTGCCACTCATGGGCTTCCCA...CGGTCTCCTCATCTGTGAGATGCTGTGGCCCAGCTGACGAGCCCTAACGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GGGGCCAAGACTAGAGTCACACAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCTGGGAAGCCCATGAGTaGCACCTCACACTCAGACCC +
Preference number: 4 (lower is better)
Translates to: GAKTRVTQPPTRSPSALSWEAHE*HLTLRP
Trigger: GGGTCTGAGTGTGAGGTGCCACTCATGGGCTTCCCA...GGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTGTGTGACTCTAGTCTTGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CACACAGCCCTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTCTGGAGGCCAGGCCCTaGGAAGCCCATGAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: HTALSAHIPEVGTENLRGLEARP*EAHEWH
Trigger: GTGCCACTCATGGGCTTCCCAGGGCCTGGCCTCCAG...ACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAGGGCTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp CTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGGGCGATCTGGTTCTGTaGCAGGTCCAGGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LHTSPRLGLRTYVVWQQEGDLVL*QVQELQ
Trigger: CTGCAGCTCCTGGACCTGTCACAGAACCAGATCGCC...CTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp CTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGTCAGGTCCAGGTTGCTaGGGTTGGCGAGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LHTSPRLGLRTYVVWQQESGPGC*GWRVAG
Trigger: TCCAGCCACTCGCCAACCTCAGCAACCTGGACCTGA...CTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp CAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCGGAAGGTCTCATTGGTaGTTTCATGCAGCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: QPPTRSPSALSGSFLHWPGRSHW*FHAACW
Trigger: CCAACAGGCTGCATGAAATCACCAATGAGACCTTCC...GGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGGACACATCCAGGTCGTaGAGGTTGCGCAAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LHTSPRLGLRTYVVWQQEDTSRS*RLRKRL
Trigger: CAGCCGCTTGCGCAACCTCCACGACCTGGATGTGTC...CTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CCCTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGTGTTGCCTTCGGGCCTaGCTCCAAGGGGACCTTCAC +
Preference number: 4 (lower is better)
Translates to: PCLHTSPRLGLRTYVVWQCCLRA*LQGDLH
Trigger: GTGAAGGTCCCCTTGGAGCCAGGCCCGAAGGCAACA...CTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp GGGGACGTTAGGGCTCGTCAGCTGGGCCACAGCATCTCACAGATGAGGAGACCGTTAGGGCTCGTCAGCTaGGCCACAGCATCTCACAGA +
Preference number: 4 (lower is better)
Translates to: GDVRARQLGHSISQMRRPLGLVS*ATASHR
Trigger: TCTGTGAGATGCTGTGGCCCAGCTGACGAGCCCTAA...CGGTCTCCTCATCTGTGAGATGCTGTGGCCCAGCTGACGAGCCCTAACGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
3UTR CAA 72 bp GTGGTCACACAGCCCTGTCTGCACACATCCCCGAGGTaGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VVTQPCLHTSPR*GLRTYVVWQQE
Trigger: CTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAGGGCTGTGTGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp TACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCGGAAGGTCTCATTGGTaGTTTCATGCAGCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: YPLSLCSFRELPSLAPRVGRSHW*FHAACW
Trigger: CCAACAGGCTGCATGAAATCACCAATGAGACCTTCC...GACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR TCA 90 bp CACACAGCCCTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTCGGGCCCCAAAGGCATaGCACAGACGGAGTAAGTGG +
Preference number: 4 (lower is better)
Translates to: HTALSAHIPEVGTENLRGRAPKA*HRRSKW
Trigger: CCACTTACTCCGTCTGTGTCATGCCTTTGGGGCCCG...ACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAGGGCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp CTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGTACCCGCTCTCCCTCTaGTCTTTCCGGGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LHTSPRLGLRTYVVWQQEYPLSL*SFRELP
Trigger: AGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTA...CTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CACACAGCCCTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTTCGAAGGCACCAGGCTaGATGTGGCGGATGCGGTTC +
Preference number: 4 (lower is better)
Translates to: HTALSAHIPEVGTENLRGSKAPG*MWRMRF
Trigger: GAACCGCATCCGCCACATCCAGCCTGGTGCCTTCGA...ACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAGGGCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGCACTCGCTCCAGCTaGTTGTCGGACACATCCAGG +
Preference number: 4 (lower is better)
Translates to: LSAHIPEVGTENLRGVAAGTRSS*LSDTSR
Trigger: CCTGGATGTGTCCGACAACCAGCTGGAGCGAGTGCC...TGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CACACAGCCCTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGCCTCGGATCACAGGTaGCACTCGCTCCAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: HTALSAHIPEVGTENLRGASDHR*HSLQLV
Trigger: AACCAGCTGGAGCGAGTGCCACCTGTGATCCGAGGC...ACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAGGGCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR GCA 90 bp CACACAGCCCTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTCCTGCAGGCTTAGGTTaGTCACATCCAGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HTALSAHIPEVGTENLRGPAGLG*SHPAPA
Trigger: TGCAGGAGCTGGATGTGAGCAACCTAAGCCTGCAGG...ACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAGGGCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CCA 90 bp CTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCATTTCATGCAGCCTGTTaGCTGTCAGGTCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: LSAHIPEVGTENLRGVAAFHAAC*LSGPGC
Trigger: GCAACCTGGACCTGACAGCCAACAGGCTGCATGAAA...TGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS GCA 90 bp TTCCTGGCGGGTCGGGCCCGAGGGGGTCCTGGGTCCCGAAGCAACTaGGTTCGAGTCCGCGTCCACCCGCCCCGGGCTCGGGCTCCGGAG +
Preference number: 5 (lower is better)
Translates to: FLAGRARGGPGSRSN*VRVRVHPPRARAPE
Trigger: CTCCGGAGCCCGAGCCCGGGGCGGGTGGACGCGGACTCGAACGCAGTTGCTTCGGGACCCAGGACCCCCTCGGGCCCGACCCGCCAGGAA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 90 bp GCCGCGGCCTCAGTCTTTCCTGGCGGGTCGGGCCCGAGGGGGTCCTaGGTCCCGAAGCAACTGCGTTCGAGTCCGCGTCCACCCGCCCCG +
Preference number: 5 (lower is better)
Translates to: AAASVFPGGSGPRGS*VPKQLRSSPRPPAP
Trigger: CGGGGCGGGTGGACGCGGACTCGAACGCAGTTGCTTCGGGACCCAGGACCCCCTCGGGCCCGACCCGCCAGGAAAGACTGAGGCCGCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 90 bp CAGGGAGGTGGGGCTCACCGGCTCGATGCCCAGGGTCAGGGACCGTaGTGGCCTCGGCGTGACTGGTGTAGGGCTGGGCCGTGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: QGGGAHRLDAQGQGP*WPRRDWCRAGPCPL
Trigger: CAGGGGACACGGCCCAGCCCTACACCAGTCACGCCGAGGCCACCACGGTCCCTGACCCTGGGCATCGAGCCGGTGAGCCCCACCTCCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 90 bp GGGCGCAATGAGGAGCGGCAGGTTGCCCTCGCGGGCCTGGGTGACTaGGGCGTGGTTGGAGTGGACGGCTGGGGGTGTATGGGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: GRNEERQVALAGLGD*GVVGVDGWGCMGLP
Trigger: GGGGAGGCCCATACACCCCCAGCCGTCCACTCCAACCACGCCCCAGTCACCCAGGCCCGCGAGGGCAACCTGCCGCTCCTCATTGCGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 90 bp GCCAGGGCGGGCGCAATGAGGAGCGGCAGGTTGCCCTCGCGGGCCTaGGTGACTGGGGCGTGGTTGGAGTGGACGGCTGGGGGTGTATGG +
Preference number: 5 (lower is better)
Translates to: ARAGAMRSGRLPSRA*VTGAWLEWTAGGVW
Trigger: CCATACACCCCCAGCCGTCCACTCCAACCACGCCCCAGTCACCCAGGCCCGCGAGGGCAACCTGCCGCTCCTCATTGCGCCCGCCCTGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp CGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCATGGGCAATGCGGGTGTaGCCGGCCAGCCGCAGGCGC +
Preference number: 5 (lower is better)
Translates to: RELPSLAPRVRLEWESPAWAMRV*PASRRR
Trigger: GCGCCTGCGGCTGGCCGGCAACACCCGCATTGCCCA...TGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp GCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCAGCCGGCCAGCGTTCTaGGGCGGGAAGTGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: ASFTGPQGPPGVGEPSRASRPAF*GGKWQR
Trigger: GCGCTGCCACTTCCCGCCCAAGAACGCTGGCCGGCT...GGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS GCA 90 bp AGGCGGGGCAGGCGCAGCGGGGGCAGTGCCCGCAGCTCGTTGTCCTaGAGCTTGAGCTCCAGGAGGCGGTCGAGCGTGTCGAAGGCACCA +
Preference number: 5 (lower is better)
Translates to: RRGRRSGGSARSSLS*SLSSRRRSSVSKAP
Trigger: TGGTGCCTTCGACACGCTCGACCGCCTCCTGGAGCTCAAGCTGCAGGACAACGAGCTGCGGGCACTGCCCCCGCTGCGCCTGCCCCGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 90 bp GGCGGGAAGTGGCAGCGCGTCTCCTCAGGGCTGGCCAGTGTGACGTaGCTCTCGCGCACCCAGGGGCCAAACCAGCTCAGGGGGCACACG +
Preference number: 5 (lower is better)
Translates to: GGKWQRVSSGLASVT*LSRTQGPNQLRGHT
Trigger: CGTGTGCCCCCTGAGCTGGTTTGGCCCCTGGGTGCGCGAGAGCCACGTCACACTGGCCAGCCCTGAGGAGACGCGCTGCCACTTCCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp GAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGCGTGACTGGGGCGTGGTaGGAGTGGACGGCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: EPSRAQACVTSTWQGPPCVTGAW*EWTAGG
Trigger: ACCCCCAGCCGTCCACTCCAACCACGCCCCAGTCAC...GCACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp GCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCTCCACCGCCCTCTGTaGCCTTCGGGCCTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: ASFTGPQGPPGVGEPSRALHRPL*PSGLAP
Trigger: TGGAGCCAGGCCCGAAGGCAACAGAGGGCGGTGGAG...GGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS TCA 90 bp TCTTGGGCGGGAAGTGGCAGCGCGTCTCCTCAGGGCTGGCCAGTGTaGCGTGGCTCTCGCGCACCCAGGGGCCAAACCAGCTCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: SWAGSGSASPQGWPV*RGSRAPRGQTSSGG
Trigger: GCCCCCTGAGCTGGTTTGGCCCCTGGGTGCGCGAGAGCCACGTCACACTGGCCAGCCCTGAGGAGACGCGCTGCCACTTCCCGCCCAAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS GCA 90 bp TGTCGGGTGGCACGTCTCGGGGCACCGTGGTCCCCTGGCGGGCAGTaGAGAAGACTGTCTGTGGCTGGCTGCACTGGCAGCCGGATGGGC +
Preference number: 5 (lower is better)
Translates to: CRVARLGAPWSPGGQ*RRLSVAGCTGSRMG
Trigger: GCCCATCCGGCTGCCAGTGCAGCCAGCCACAGACAGTCTTCTGCACTGCCCGCCAGGGGACCACGGTGCCCCGAGACGTGCCACCCGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS GCA 90 bp GGAGGCGGTCGAGCGTGTCGAAGGCACCAGGCTGGATGTGGCGGATaGGGTTCTTGCCCAGGTAGAGGCGCTCGAGGCGCCGCAGGCCAC +
Preference number: 5 (lower is better)
Translates to: GGGRACRRHQAGCGG*GSCPGRGARGAAGH
Trigger: GTGGCCTGCGGCGCCTCGAGCGCCTCTACCTGGGCAAGAACCGCATCCGCCACATCCAGCCTGGTGCCTTCGACACGCTCGACCGCCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 90 bp GGCCAGCCGCAGGCGCGTCAGGCCCCGGAGGCCTCGGATCACAGGTaGCACTCGCTCCAGCTGGTTGTCGGACACATCCAGGTCGTGGAG +
Preference number: 5 (lower is better)
Translates to: GQPQARQAPEASDHR*HSLQLVVGHIQVVE
Trigger: CTCCACGACCTGGATGTGTCCGACAACCAGCTGGAGCGAGTGCCACCTGTGATCCGAGGCCTCCGGGGCCTGACGCGCCTGCGGCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 90 bp CGGCTCGATGCCCAGGGTCAGGGACCGTGGTGGCCTCGGCGTGACTaGTGTAGGGCTGGGCCGTGTCCCCTGCCCCATCTGGCTCTCACA +
Preference number: 5 (lower is better)
Translates to: RLDAQGQGPWWPRRD*CRAGPCPLPHLALT
Trigger: TGTGAGAGCCAGATGGGGCAGGGGACACGGCCCAGCCCTACACCAGTCACGCCGAGGCCACCACGGTCCCTGACCCTGGGCATCGAGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp GCAGCAGGAGGGGGCTGGCCATCTCACTGGCTGAGAGCCCGGCCCCAGCTGCCCGCTGTCAGGTCCAGGTaGCTGAGGTTGGCGAGTGGC +
Preference number: 5 (lower is better)
Translates to: AAGGGWPSHWLRARPQLPAVRSR*LRLASG
Trigger: GCCACTCGCCAACCTCAGCAACCTGGACCTGACAGC...GGGCAGCTGGGGCCGGGCTCTCAGCCAGTGAGATGGCCAGCCCCCTCCTGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp GAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGCAGGGCCAGGAGGCTGTaGTGGCTGAGGTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: EPSRAQACVTSTWQGPPCRARRL*WLRSSS
Trigger: GCTGCTGGACCTCAGCCACAACAGCCTCCTGGCCCT...GCACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp GCAGCAGGAGGGGGCTGGCCATCTCACTGGCTGAGAGCCCGGCCCCAGCTGCCCTCCAGGTCGTGGAGGTaGCGCAAGCGGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: AAGGGWPSHWLRARPQLPSRSWR*RKRLKS
Trigger: GCTCTTCAGCCGCTTGCGCAACCTCCACGACCTGGA...GGGCAGCTGGGGCCGGGCTCTCAGCCAGTGAGATGGCCAGCCCCCTCCTGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp GGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCACGCAGTTGAAGGGGTaGCGGGCAGCTGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GRAQQGPGMRYQHMAGPATQLKG*RAAASS
Trigger: GCTGCTGGCAGCTGCCCGCAACCCCTTCAACTGCGT...GGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp GAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGCAGGGGGCACACGCAGTaGAAGGGGTTGCGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: EPSRAQACVTSTWQGPPCRGHTQ*KGLRAA
Trigger: AGCTGCCCGCAACCCCTTCAACTGCGTGTGCCCCCT...GCACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp GAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGCTGGCATGTGCCCCCATaGAGGCAGGTGGACGGTGGG +
Preference number: 5 (lower is better)
Translates to: EPSRAQACVTSTWQGPPCWHVPP*RQVDGG
Trigger: CCCACCGTCCACCTGCCTCAATGGGGGCACATGCCA...GCACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp CGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCAGTGACTGGGGCGTGGTaGGAGTGGACGGCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: RELPSLAPRVRLEWESPAVTGAW*EWTAGG
Trigger: ACCCCCAGCCGTCCACTCCAACCACGCCCCAGTCAC...TGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp AGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGCTCCACCGCCCTCTGTaGCCTTCGGGCCTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: RAQQGPGMRYQHMAGPAVLHRPL*PSGLAP
Trigger: TGGAGCCAGGCCCGAAGGCAACAGAGGGCGGTGGAG...CACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS GCA 90 bp TCGTGGAGGTTGCGCAAGCGGCTGAAGAGCCCCTCGTCCAGCTGCTaGAGCCCCAGACCAGCCAGCCGCAGCGCCTCCACGTTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: SWRLRKRLKSPSSSC*SPRPASRSASTLAV
Trigger: CACTGCCAACGTGGAGGCGCTGCGGCTGGCTGGTCTGGGGCTGCAGCAGCTGGACGAGGGGCTCTTCAGCCGCTTGCGCAACCTCCACGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS GCA 90 bp AGGTCGTGGAGGTTGCGCAAGCGGCTGAAGAGCCCCTCGTCCAGCTaGTGCAGCCCCAGACCAGCCAGCCGCAGCGCCTCCACGTTGGCA +
Preference number: 5 (lower is better)
Translates to: RSWRLRKRLKSPSSS*CSPRPASRSASTLA
Trigger: TGCCAACGTGGAGGCGCTGCGGCTGGCTGGTCTGGGGCTGCAGCAGCTGGACGAGGGGCTCTTCAGCCGCTTGCGCAACCTCCACGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp TCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGAGGGCCAGGAGGCTGTaGTGGCTGAGGTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SGSFLHWPPGSAWSGRAQRARRL*WLRSSS
Trigger: GCTGCTGGACCTCAGCCACAACAGCCTCCTGGCCCT...CTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp TACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCTGGGCAATGCGGGTGTaGCCGGCCAGCCGCAGGCGC +
Preference number: 5 (lower is better)
Translates to: YPLSLCSFRELPSLAPRVWAMRV*PASRRR
Trigger: GCGCCTGCGGCTGGCCGGCAACACCCGCATTGCCCA...GACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp GGGTCCGCCTGGAGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACAGGGGGCACACGCAGTaGAAGGGGTTGCGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: GSAWSGRAQQGPGMRYQHRGHTQ*KGLRAA
Trigger: AGCTGCCCGCAACCCCTTCAACTGCGTGTGCCCCCT...GTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACTCCAGGCGGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS TCA 90 bp GCTTTGCGTGGAGGGGTGACTGGAGGCCAGGCCCTGGGAAGCCCATaGGTGGCACCTCACACTCAGACCCGCTGGGCAGGGCCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: ALRGGVTGGQALGSP*VAPHTQTRWAGPLH
Trigger: GTGGAGAGGCCCTGCCCAGCGGGTCTGAGTGTGAGGTGCCACTCATGGGCTTCCCAGGGCCTGGCCTCCAGTCACCCCTCCACGCAAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp TACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCATGAGGAGCGGCAGGTaGCCCTCGCGGGCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: YPLSLCSFRELPSLAPRVMRSGR*PSRAWV
Trigger: CACCCAGGCCCGCGAGGGCAACCTGCCGCTCCTCAT...GACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS TCA 90 bp GCTGCAGGCCCGGCAGGCCGGCAAAGCTGCCTGCGTCGAGCATGGTaGTGCCGTTCTCAAAGACGTACAGCCCCACCGTGTCGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: AAGPAGRQSCLRRAW*CRSQRRTAPPCRVA
Trigger: TGCCACCCGACACGGTGGGGCTGTACGTCTTTGAGAACGGCATCACCATGCTCGACGCAGGCAGCTTTGCCGGCCTGCCGGGCCTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 90 bp GTCAGGCCCCGGAGGCCTCGGATCACAGGTGGCACTCGCTCCAGCTaGTTGTCGGACACATCCAGGTCGTGGAGGTTGCGCAAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: VRPRRPRITGGTRSS*LSDTSRSWRLRKRL
Trigger: CAGCCGCTTGCGCAACCTCCACGACCTGGATGTGTCCGACAACCAGCTGGAGCGAGTGCCACCTGTGATCCGAGGCCTCCGGGGCCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp CGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGAGTGGGAGAGCCCAGCAGCCTGCAGGCTTAGGTaGCTCACATCCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: RELPSLAPRVRLEWESPAACRLR*LTSSSC
Trigger: GCAGGAGCTGGATGTGAGCAACCTAAGCCTGCAGGC...TGCTGGGCTCTCCCACTCCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp GGGGCCAAGACTAGAGTCACACAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCAGCCGGCCAGCGTTCTaGGGCGGGAAGTGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: GAKTRVTQPPTRSPSALSSRPAF*GGKWQR
Trigger: GCGCTGCCACTTCCCGCCCAAGAACGCTGGCCGGCT...GGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTGTGTGACTCTAGTCTTGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp CAGGGACTGCACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGTGGCATGTGCCCCCATaGAGGCAGGTGGACGGTGGG +
Preference number: 5 (lower is better)
Translates to: QGLHVAEGRADTVLIGTRWHVPP*RQVDGG
Trigger: CCCACCGTCCACCTGCCTCAATGGGGGCACATGCCA...CCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTGCAGTCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp AGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCTCCAGGTTGCTGAGGTaGGCGAGTGGCTGGAAGACC +
Preference number: 5 (lower is better)
Translates to: SGRAQQGPGMRYQHMAGPSRLLR*ASGWKT
Trigger: GGTCTTCCAGCCACTCGCCAACCTCAGCAACCTGGA...GGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp TCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGTCGTTGTCCTGCAGCTaGAGCTCCAGGAGGCGGTCG +
Preference number: 5 (lower is better)
Translates to: SPSALSGSFLHWPPGSAWSLSCS*SSRRRS
Trigger: CGACCGCCTCCTGGAGCTCAAGCTGCAGGACAACGA...CCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp CAGGGACTGCACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGAGTGCCCGCAGCTCGTaGTCCTGCAGCTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: QGLHVAEGRADTVLIGTRSARSS*SCSLSS
Trigger: GGAGCTCAAGCTGCAGGACAACGAGCTGCGGGCACT...CCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTGCAGTCCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp ACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGGGGGCTATGAGGAGCGGCAGGTaGCCCTCGCGGGCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: TSPRLGLRTYVVWQQEGAMRSGR*PSRAWV
Trigger: CACCCAGGCCCGCGAGGGCAACCTGCCGCTCCTCAT...AGCCCCCTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp GAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCGTGCCTTAGATGTAGGGCTTaGCGTGGAGGGGTGACTGGA +
Preference number: 5 (lower is better)
Translates to: EPSRAQACVTSTWQGPPCLRCRA*RGGVTG
Trigger: TCCAGTCACCCCTCCACGCAAAGCCCTACATCTAAG...GCACGGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 90 bp ACAGGTGGCACTCGCTCCAGCTGGTTGTCGGACACATCCAGGTCGTaGAGGTTGCGCAAGCGGCTGAAGAGCCCCTCGTCCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: TGGTRSSWLSDTSRS*RLRKRLKSPSSSCC
Trigger: GCAGCAGCTGGACGAGGGGCTCTTCAGCCGCTTGCGCAACCTCCACGACCTGGATGTGTCCGACAACCAGCTGGAGCGAGTGCCACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp CCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCAGGTTGCTGAGGTaGGCGAGTGGCTGGAAGACC +
Preference number: 5 (lower is better)
Translates to: PTRSPSALSGSFLHWPPGSRLLR*ASGWKT
Trigger: GGTCTTCCAGCCACTCGCCAACCTCAGCAACCTGGA...CCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp CCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGACTCGCTCCAGCTGGTaGTCGGACACATCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: PTRSPSALSGSFLHWPPGTRSSW*SDTSRS
Trigger: CGACCTGGATGTGTCCGACAACCAGCTGGAGCGAGT...CCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp CAGGGACTGCACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGACTCGCTCCAGCTGGTaGTCGGACACATCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: QGLHVAEGRADTVLIGTRTRSSW*SDTSRS
Trigger: CGACCTGGATGTGTCCGACAACCAGCTGGAGCGAGT...CCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTGCAGTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp CAGGGACTGCACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGGCCTGCAGGCTTAGGTaGCTCACATCCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: QGLHVAEGRADTVLIGTRACRLR*LTSSSC
Trigger: GCAGGAGCTGGATGTGAGCAACCTAAGCCTGCAGGC...CCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTGCAGTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 90 bp AGCCTGTTGGCTGTCAGGTCCAGGTTGCTGAGGTTGGCGAGTGGCTaGAAGACCCCGCTGGGCAGGCTGGCGATCTGGTTCTGTGACAGG +
Preference number: 5 (lower is better)
Translates to: SLLAVRSRLLRLASG*KTPLGRLAIWFCDR
Trigger: CCTGTCACAGAACCAGATCGCCAGCCTGCCCAGCGGGGTCTTCCAGCCACTCGCCAACCTCAGCAACCTGGACCTGACAGCCAACAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp GGGGCCAAGACTAGAGTCACACAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCGCTGTCAGGTCCAGGTaGCTGAGGTTGGCGAGTGGC +
Preference number: 5 (lower is better)
Translates to: GAKTRVTQPPTRSPSALSAVRSR*LRLASG
Trigger: GCCACTCGCCAACCTCAGCAACCTGGACCTGACAGC...GGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTGTGTGACTCTAGTCTTGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp GGGGACGTTAGGGCTCGTCAGCTGGGCCACAGCATCTCACAGATGAGGAGACCGTCGTTGTCCTGCAGCTaGAGCTCCAGGAGGCGGTCG +
Preference number: 5 (lower is better)
Translates to: GDVRARQLGHSISQMRRPSLSCS*SSRRRS
Trigger: CGACCGCCTCCTGGAGCTCAAGCTGCAGGACAACGA...CGGTCTCCTCATCTGTGAGATGCTGTGGCCCAGCTGACGAGCCCTAACGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp GGGGCCAAGACTAGAGTCACACAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCTCCAGGTCGTGGAGGTaGCGCAAGCGGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: GAKTRVTQPPTRSPSALSSRSWR*RKRLKS
Trigger: GCTCTTCAGCCGCTTGCGCAACCTCCACGACCTGGA...GGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTGTGTGACTCTAGTCTTGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp GCCGCCTACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCCACACATCCCCGAGGTaGGGACTGAGAACTTACGTG +
Preference number: 5 (lower is better)
Translates to: AAYPLSLCSFRELPSLAPHTSPR*GLRTYV
Trigger: CACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTG...GGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTAGGCGGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp TCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCGCCTGGCCACGGAAGGTCTCATaGGTGATTTCATGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: SPSALSGSFLHWPPGSAWPRKVS*VISCSL
Trigger: CAGGCTGCATGAAATCACCAATGAGACCTTCCGTGG...CCAGGCGGACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp CTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGAGTGCCCGCAGCTCGTaGTCCTGCAGCTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LHTSPRLGLRTYVVWQQESARSS*SCSLSS
Trigger: GGAGCTCAAGCTGCAGGACAACGAGCTGCGGGCACT...CTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp CACACAGCCCTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTACGCAGTTGAAGGGGTaGCGGGCAGCTGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: HTALSAHIPEVGTENLRGTQLKG*RAAASS
Trigger: GCTGCTGGCAGCTGCCCGCAACCCCTTCAACTGCGT...ACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAGGGCTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp CACGTTGCGGAGGGCAGGGCGGACACTGTCCTCATAGGCACTCGGTTCTGGGGACTTAGATGTAGGGCTTaGCGTGGAGGGGTGACTGGA +
Preference number: 5 (lower is better)
Translates to: HVAEGRADTVLIGTRFWGLRCRA*RGGVTG
Trigger: TCCAGTCACCCCTCCACGCAAAGCCCTACATCTAAG...TCCCCAGAACCGAGTGCCTATGAGGACAGTGTCCGCCCTGCCCTCCGCAACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp GGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCGCCCAAAAACCAAAGTCCTaGTCTCTGAGTTTGAAAAAC +
Preference number: 5 (lower is better)
Translates to: GRAQQGPGMRYQHMAGPAQKPKS*SLSLKN
Trigger: GTTTTTCAAACTCAGAGACAAGGACTTTGGTTTTTG...GGCGGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp CTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTGTGGCAGCAGGAGATTTCATGCAGCCTGTaGGCTGTCAGGTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LHTSPRLGLRTYVVWQQEISCSL*AVRSRL
Trigger: CAACCTGGACCTGACAGCCAACAGGCTGCATGAAAT...CTCCTGCTGCCACACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp AGTGGGAGAGCCCAGCAGGGCCCAGGCATGCGTTACCAGCACATGGCAGGGCCCTCCTTGTCTCTGAGTTaGAAAAACATCTTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: SGRAQQGPGMRYQHMAGPSLSLS*KNIFPE
Trigger: TTCTGGGAAGATGTTTTTCAAACTCAGAGACAAGGA...GGGCCCTGCCATGTGCTGGTAACGCATGCCTGGGCCCTGCTGGGCTCTCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp CACACAGCCCTGTCTGCACACATCCCCGAGGTTGGGACTGAGAACTTACGTGGTCCACGGAAGGTCTCATaGGTGATTTCATGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: HTALSAHIPEVGTENLRGPRKVS*VISCSL
Trigger: CAGGCTGCATGAAATCACCAATGAGACCTTCCGTGG...ACCACGTAAGTTCTCAGTCCCAACCTCGGGGATGTGTGCAGACAGGGCTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp GGGGCCAAGACTAGAGTCACACAGCCGCCTACCCGCTCTCCCTCTGCTCTTTCCTCCTTGTCTCTGAGTTaGAAAAACATCTTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: GAKTRVTQPPTRSPSALSSLSLS*KNIFPE
Trigger: TTCTGGGAAGATGTTTTTCAAACTCAGAGACAAGGA...GGAAAGAGCAGAGGGAGAGCGGGTAGGCGGCTGTGTGACTCTAGTCTTGGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS-3UTR CAA 90 bp TACCCGCTCTCCCTCTGCTCTTTCCGGGAGCTTCCTTCACTGGCCCCCAGGGTCCAAAAACCAAAGTCCTaGTCTCTGAGTTTGAAAAAC +
Preference number: 5 (lower is better)
Translates to: YPLSLCSFRELPSLAPRVQKPKS*SLSLKN
Trigger: GTTTTTCAAACTCAGAGACAAGGACTTTGGTTTTTG...GACCCTGGGGGCCAGTGAAGGAAGCTCCCGGAAAGAGCAGAGGGAGAGCGGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CAA 72 bp GCCAGGTCCTCGGGCCGCAGCTGGGCAATGCGGGTGTaGCCGGCCAGCCGCAGGCGCGTCAGGCCCCGGAGG +
Preference number: 6 (lower is better)
Translates to: ARSSGRSWAMRV*PASRRRVRPRR
Trigger: CCTCCGGGGCCTGACGCGCCTGCGGCTGGCCGGCAACACCCGCATTGCCCAGCTGCGGCCCGAGGACCTGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS GCA 72 bp GGTCGGGCCCGAGGGGGTCCTGGGTCCCGAAGCAACTaGGTTCGAGTCCGCGTCCACCCGCCCCGGGCTCGG +
Preference number: 6 (lower is better)
Translates to: GRARGGPGSRSN*VRVRVHPPRAR
Trigger: CCGAGCCCGGGGCGGGTGGACGCGGACTCGAACGCAGTTGCTTCGGGACCCAGGACCCCCTCGGGCCCGACC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CAA 72 bp ACCGCGGCCAGGGCGGGCGCAATGAGGAGCGGCAGGTaGCCCTCGCGGGCCTGGGTGACTGGGGCGTGGTTG +
Preference number: 6 (lower is better)
Translates to: TAARAGAMRSGR*PSRAWVTGAWL
Trigger: CAACCACGCCCCAGTCACCCAGGCCCGCGAGGGCAACCTGCCGCTCCTCATTGCGCCCGCCCTGGCCGCGGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS GCA 72 bp CCCTGGCCCCACCTGCCCTTTGTCCTGAGCCGCTGCTaGCATGGCCCGCCCCCGCCGCACACAGTAGGCTGC +
Preference number: 6 (lower is better)
Translates to: PWPHLPFVLSRC*HGPPPPHTVGC
Trigger: GCAGCCTACTGTGTGCGGCGGGGGCGGGCCATGGCAGCAGCGGCTCAGGACAAAGGGCAGGTGGGGCCAGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 72 bp GGGGCTCACCGGCTCGATGCCCAGGGTCAGGGACCGTaGTGGCCTCGGCGTGACTGGTGTAGGGCTGGGCCG +
Preference number: 6 (lower is better)
Translates to: GAHRLDAQGQGP*WPRRDWCRAGP
Trigger: CGGCCCAGCCCTACACCAGTCACGCCGAGGCCACCACGGTCCCTGACCCTGGGCATCGAGCCGGTGAGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CAA 72 bp CGGGGCAGGCGCAGCGGGGGCAGTGCCCGCAGCTCGTaGTCCTGCAGCTTGAGCTCCAGGAGGCGGTCGAGC +
Preference number: 6 (lower is better)
Translates to: RGRRSGGSARSS*SCSLSSRRRSS
Trigger: GCTCGACCGCCTCCTGGAGCTCAAGCTGCAGGACAACGAGCTGCGGGCACTGCCCCCGCTGCGCCTGCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 72 bp GGCGCAATGAGGAGCGGCAGGTTGCCCTCGCGGGCCTaGGTGACTGGGGCGTGGTTGGAGTGGACGGCTGGG +
Preference number: 6 (lower is better)
Translates to: GAMRSGRLPSRA*VTGAWLEWTAG
Trigger: CCCAGCCGTCCACTCCAACCACGCCCCAGTCACCCAGGCCCGCGAGGGCAACCTGCCGCTCCTCATTGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS TCA 72 bp CCTCGCCCTCCGGCACCCGCCCGGGCCCCAAAGGCATaGCACAGACGGAGTAAGTGGCGTTGGGCCGCAGCT +
Preference number: 6 (lower is better)
Translates to: PRPPAPARAPKA*HRRSKWRWAAA
Trigger: AGCTGCGGCCCAACGCCACTTACTCCGTCTGTGTCATGCCTTTGGGGCCCGGGCGGGTGCCGGAGGGCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS GCA 72 bp AGGCGCAGCGGGGGCAGTGCCCGCAGCTCGTTGTCCTaGAGCTTGAGCTCCAGGAGGCGGTCGAGCGTGTCG +
Preference number: 6 (lower is better)
Translates to: RRSGGSARSSLS*SLSSRRRSSVS
Trigger: CGACACGCTCGACCGCCTCCTGGAGCTCAAGCTGCAGGACAACGAGCTGCGGGCACTGCCCCCGCTGCGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS GCA 72 bp TTGCGCAAGCGGCTGAAGAGCCCCTCGTCCAGCTGCTaGAGCCCCAGACCAGCCAGCCGCAGCGCCTCCACG +
Preference number: 6 (lower is better)
Translates to: LRKRLKSPSSSC*SPRPASRSAST
Trigger: CGTGGAGGCGCTGCGGCTGGCTGGTCTGGGGCTGCAGCAGCTGGACGAGGGGCTCTTCAGCCGCTTGCGCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS GCA 72 bp AGGTTGCGCAAGCGGCTGAAGAGCCCCTCGTCCAGCTaGTGCAGCCCCAGACCAGCCAGCCGCAGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: RLRKRLKSPSSS*CSPRPASRSAS
Trigger: GGAGGCGCTGCGGCTGGCTGGTCTGGGGCTGCAGCAGCTGGACGAGGGGCTCTTCAGCCGCTTGCGCAACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 72 bp GAGGAGCGGCAGGTTGCCCTCGCGGGCCTGGGTGACTaGGGCGTGGTTGGAGTGGACGGCTGGGGGTGTATG +
Preference number: 6 (lower is better)
Translates to: EERQVALAGLGD*GVVGVDGWGCM
Trigger: CATACACCCCCAGCCGTCCACTCCAACCACGCCCCAGTCACCCAGGCCCGCGAGGGCAACCTGCCGCTCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS TCA 72 bp GGAAGTGGCAGCGCGTCTCCTCAGGGCTGGCCAGTGTaGCGTGGCTCTCGCGCACCCAGGGGCCAAACCAGC +
Preference number: 6 (lower is better)
Translates to: GSGSASPQGWPV*RGSRAPRGQTS
Trigger: GCTGGTTTGGCCCCTGGGTGCGCGAGAGCCACGTCACACTGGCCAGCCCTGAGGAGACGCGCTGCCACTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS TCA 72 bp GGAGGGGTGACTGGAGGCCAGGCCCTGGGAAGCCCATaGGTGGCACCTCACACTCAGACCCGCTGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: GGVTGGQALGSP*VAPHTQTRWAG
Trigger: CCCTGCCCAGCGGGTCTGAGTGTGAGGTGCCACTCATGGGCTTCCCAGGGCCTGGCCTCCAGTCACCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS GCA 72 bp AGACCCGCTGGGCAGGGCCTCTCCACCGCCCTCTGTTaGCTTCGGGCCTGGCTCCAAGGGGACCTTCACTCC +
Preference number: 6 (lower is better)
Translates to: RPAGQGLSTALC*LRAWLQGDLHS
Trigger: GGAGTGAAGGTCCCCTTGGAGCCAGGCCCGAAGGCAACAGAGGGCGGTGGAGAGGCCCTGCCCAGCGGGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 72 bp CGTGGTCCCCTGGCGGGCAGTGCAGAAGACTGTCTGTaGCTGGCTGCACTGGCAGCCGGATGGGCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: RGPLAGSAEDCL*LAALAAGWAAL
Trigger: CAGGGCTGCCCATCCGGCTGCCAGTGCAGCCAGCCACAGACAGTCTTCTGCACTGCCCGCCAGGGGACCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 72 bp TGGCAGCGCGTCTCCTCAGGGCTGGCCAGTGTGACGTaGCTCTCGCGCACCCAGGGGCCAAACCAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: WQRVSSGLASVT*LSRTQGPNQLR
Trigger: CCTGAGCTGGTTTGGCCCCTGGGTGCGCGAGAGCCACGTCACACTGGCCAGCCCTGAGGAGACGCGCTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 72 bp TCCAGGAGCAGCCGGCCAGCGTTCTTGGGCGGGAAGTaGCAGCGCGTCTCCTCAGGGCTGGCCAGTGTGACG +
Preference number: 6 (lower is better)
Translates to: SRSSRPAFLGGK*QRVSSGLASVT
Trigger: CGTCACACTGGCCAGCCCTGAGGAGACGCGCTGCCACTTCCCGCCCAAGAACGCTGGCCGGCTGCTCCTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 72 bp GGGCACAAGCACGCCAGGTGGTGCCGTGTCCCCAGGTaGCATGTGCCCCCATTGAGGCAGGTGGACGGTGGG +
Preference number: 6 (lower is better)
Translates to: GHKHARWCRVPR*HVPPLRQVDGG
Trigger: CCCACCGTCCACCTGCCTCAATGGGGGCACATGCCACCTGGGGACACGGCACCACCTGGCGTGCTTGTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 72 bp TCAGTCTTTCCTGGCGGGTCGGGCCCGAGGGGGTCCTaGGTCCCGAAGCAACTGCGTTCGAGTCCGCGTCCA +
Preference number: 6 (lower is better)
Translates to: SVFPGGSGPRGS*VPKQLRSSPRP
Trigger: TGGACGCGGACTCGAACGCAGTTGCTTCGGGACCCAGGACCCCCTCGGGCCCGACCCGCCAGGAAAGACTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 72 bp CAGGCGCGTCAGGCCCCGGAGGCCTCGGATCACAGGTaGCACTCGCTCCAGCTGGTTGTCGGACACATCCAG +
Preference number: 6 (lower is better)
Translates to: QARQAPEASDHR*HSLQLVVGHIQ
Trigger: CTGGATGTGTCCGACAACCAGCTGGAGCGAGTGCCACCTGTGATCCGAGGCCTCCGGGGCCTGACGCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 72 bp CGTAGTCAAGCTCCAGGAGCAGCCGGCCAGCGTTCTTaGGCGGGAAGTGGCAGCGCGTCTCCTCAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: RSQAPGAAGQRS*AGSGSASPQGW
Trigger: CCAGCCCTGAGGAGACGCGCTGCCACTTCCCGCCCAAGAACGCTGGCCGGCTGCTCCTGGAGCTTGACTACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CAA 90 bp GGCACTCGCTCCAGCTGGTTGTCGGACACATCCAGGTCGTGGAGGTaGCGCAAGCGGCTGAAGAGCCCCTCGTCCAGCTGCTGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: GTRSSWLSDTSRSWR*RKRLKSPSSSCCSP
Trigger: GGGGCTGCAGCAGCTGGACGAGGGGCTCTTCAGCCGCTTGCGCAACCTCCACGACCTGGATGTGTCCGACAACCAGCTGGAGCGAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS GCA 72 bp CTCGGCGTGACTGGTGTAGGGCTGGGCCGTGTCCCCTaGCCCATCTGGCTCTCACAGTACAGGCCCGTGAAG +
Preference number: 6 (lower is better)
Translates to: LGVTGVGLGRVP*PIWLSQYRPVK
Trigger: CTTCACGGGCCTGTACTGTGAGAGCCAGATGGGGCAGGGGACACGGCCCAGCCCTACACCAGTCACGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CAA 90 bp AGGCCCCGGAGGCCTCGGATCACAGGTGGCACTCGCTCCAGCTGGTaGTCGGACACATCCAGGTCGTGGAGGTTGCGCAAGCGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: RPRRPRITGGTRSSW*SDTSRSWRLRKRLK
Trigger: CTTCAGCCGCTTGCGCAACCTCCACGACCTGGATGTGTCCGACAACCAGCTGGAGCGAGTGCCACCTGTGATCCGAGGCCTCCGGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS TCA 72 bp CACAGACGGAGTAAGTGGCGTTGGGCCGCAGCTGGGTaGCCGTGTACTCAGCGAGCGAGGCAGGCAGTCGCA +
Preference number: 6 (lower is better)
Translates to: HRRSKWRWAAAG*PCTQRARQAVA
Trigger: TGCGACTGCCTGCCTCGCTCGCTGAGTACACGGTCACCCAGCTGCGGCCCAACGCCACTTACTCCGTCTGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 72 bp GCTGTCAGGTCCAGGTTGCTGAGGTTGGCGAGTGGCTaGAAGACCCCGCTGGGCAGGCTGGCGATCTGGTTC +
Preference number: 6 (lower is better)
Translates to: AVRSRLLRLASG*KTPLGRLAIWF
Trigger: GAACCAGATCGCCAGCCTGCCCAGCGGGGTCTTCCAGCCACTCGCCAACCTCAGCAACCTGGACCTGACAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 72 bp CGGAGGCCTCGGATCACAGGTGGCACTCGCTCCAGCTaGTTGTCGGACACATCCAGGTCGTGGAGGTTGCGC +
Preference number: 6 (lower is better)
Translates to: RRPRITGGTRSS*LSDTSRSWRLR
Trigger: GCGCAACCTCCACGACCTGGATGTGTCCGACAACCAGCTGGAGCGAGTGCCACCTGTGATCCGAGGCCTCCG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS TCA 72 bp CCGGCAGGCCGGCAAAGCTGCCTGCGTCGAGCATGGTaGTGCCGTTCTCAAAGACGTACAGCCCCACCGTGT +
Preference number: 6 (lower is better)
Translates to: PAGRQSCLRRAW*CRSQRRTAPPC
Trigger: ACACGGTGGGGCTGTACGTCTTTGAGAACGGCATCACCATGCTCGACGCAGGCAGCTTTGCCGGCCTGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS GCA 72 bp CAGGAGCTGCAGGCCCGGCAGGCCGGCAAAGCTGCCTaGGTCGAGCATGGTGATGCCGTTCTCAAAGACGTA +
Preference number: 6 (lower is better)
Translates to: QELQARQAGKAA*VEHGDAVLKDV
Trigger: TACGTCTTTGAGAACGGCATCACCATGCTCGACGCAGGCAGCTTTGCCGGCCTGCCGGGCCTGCAGCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CCA 72 bp ACTCGCTCCAGCTGGTTGTCGGACACATCCAGGTCGTaGAGGTTGCGCAAGCGGCTGAAGAGCCCCTCGTCC +
Preference number: 6 (lower is better)
Translates to: TRSSWLSDTSRS*RLRKRLKSPSS
Trigger: GGACGAGGGGCTCTTCAGCCGCTTGCGCAACCTCCACGACCTGGATGTGTCCGACAACCAGCTGGAGCGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CAA 72 bp TCCAGCTGGTTGTCGGACACATCCAGGTCGTGGAGGTaGCGCAAGCGGCTGAAGAGCCCCTCGTCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SSWLSDTSRSWR*RKRLKSPSSSC
Trigger: GCAGCTGGACGAGGGGCTCTTCAGCCGCTTGCGCAACCTCCACGACCTGGATGTGTCCGACAACCAGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CAA 90 bp GTGATTTCATGCAGCCTGTTGGCTGTCAGGTCCAGGTTGCTGAGGTaGGCGAGTGGCTGGAAGACCCCGCTGGGCAGGCTGGCGATCTGG +
Preference number: 6 (lower is better)
Translates to: VISCSLLAVRSRLLR*ASGWKTPLGRLAIW
Trigger: CCAGATCGCCAGCCTGCCCAGCGGGGTCTTCCAGCCACTCGCCAACCTCAGCAACCTGGACCTGACAGCCAACAGGCTGCATGAAATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CAA 72 bp AGGCCTCGGATCACAGGTGGCACTCGCTCCAGCTGGTaGTCGGACACATCCAGGTCGTGGAGGTTGCGCAAG +
Preference number: 6 (lower is better)
Translates to: RPRITGGTRSSW*SDTSRSWRLRK
Trigger: CTTGCGCAACCTCCACGACCTGGATGTGTCCGACAACCAGCTGGAGCGAGTGCCACCTGTGATCCGAGGCCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CAA 72 bp AGCTGCCCTGTCTCTCTCTGGCTTAGATGTAGGGCTTaGCGTGGAGGGGTGACTGGAGGCCAGGCCCTGGGA +
Preference number: 6 (lower is better)
Translates to: SCPVSLWLRCRA*RGGVTGGQALG
Trigger: TCCCAGGGCCTGGCCTCCAGTCACCCCTCCACGCAAAGCCCTACATCTAAGCCAGAGAGAGACAGGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS TCA 72 bp GCTCGAGGCGCCGCAGGCCACGGAAGGTCTCATTGGTaGTTTCATGCAGCCTGTTGGCTGTCAGGTCCAGGT +
Preference number: 6 (lower is better)
Translates to: ARGAAGHGRSHW*FHAACWLSGPG
Trigger: ACCTGGACCTGACAGCCAACAGGCTGCATGAAATCACCAATGAGACCTTCCGTGGCCTGCGGCGCCTCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CAA 90 bp GTCTCATTGGTGATTTCATGCAGCCTGTTGGCTGTCAGGTCCAGGTaGCTGAGGTTGGCGAGTGGCTGGAAGACCCCGCTGGGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: VSLVISCSLLAVRSR*LRLASGWKTPLGRL
Trigger: CAGCCTGCCCAGCGGGGTCTTCCAGCCACTCGCCAACCTCAGCAACCTGGACCTGACAGCCAACAGGCTGCATGAAATCACCAATGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CAA 90 bp CGCCGCAGGCCACGGAAGGTCTCATTGGTGATTTCATGCAGCCTGTaGGCTGTCAGGTCCAGGTTGCTGAGGTTGGCGAGTGGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: RRRPRKVSLVISCSL*AVRSRLLRLASGWK
Trigger: CTTCCAGCCACTCGCCAACCTCAGCAACCTGGACCTGACAGCCAACAGGCTGCATGAAATCACCAATGAGACCTTCCGTGGCCTGCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CAA 72 bp GTGATTTCATGCAGCCTGTTGGCTGTCAGGTCCAGGTaGCTGAGGTTGGCGAGTGGCTGGAAGACCCCGCTG +
Preference number: 6 (lower is better)
Translates to: VISCSLLAVRSR*LRLASGWKTPL
Trigger: CAGCGGGGTCTTCCAGCCACTCGCCAACCTCAGCAACCTGGACCTGACAGCCAACAGGCTGCATGAAATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1
CDS CAA 72 bp CCACGGAAGGTCTCATTGGTGATTTCATGCAGCCTGTaGGCTGTCAGGTCCAGGTTGCTGAGGTTGGCGAGT +
Preference number: 6 (lower is better)
Translates to: PRKVSLVISCSL*AVRSRLLRLAS
Trigger: ACTCGCCAACCTCAGCAACCTGGACCTGACAGCCAACAGGCTGCATGAAATCACCAATGAGACCTTCCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304735.4
ENST00000622615.1