RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VASH2 (Homo sapiens)

Ensembl gene IDs: ENSG00000143494

Ensembl transcript IDs: ENST00000271776.4, ENST00000366964.7, ENST00000366965.6, ENST00000366966.6, ENST00000366967.6, ENST00000366968.8, ENST00000366969.2, ENST00000481097.1, ENST00000490792.1, ENST00000493155.1, ENST00000517399.3

Found 517 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTAGCCTCACCATTCCCTCATGTAACAGCTCCCAACGGGCTTTGCTaGTCCAGCCCAGCCTTTCCCAATCTGTCCTTCAGCCTGTGCTTT +
Preference number: 1 (lower is better)
Translates to: LASPFPHVTAPNGLC*SSPAFPNLSFSLCF
Trigger: AAAGCACAGGCTGAAGGACAGATTGGGAAAGGCTGGGCTGGATCAGCAAAGCCCGTTGGGAGCTGTTACATGAGGGAATGGTGAGGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR GCA 90 bp CCATCCCTTCCCTCCACCTTCACTGGCACTGTCTTAGTTCAGGTCTaGATTGACGCATATCCTTTCTCTGCCACTCTCATTCCTCCAGCT +
Preference number: 1 (lower is better)
Translates to: PSLPSTFTGTVLVQV*IDAYPFSATLIPPA
Trigger: AGCTGGAGGAATGAGAGTGGCAGAGAAAGGATATGCGTCAATGCAGACCTGAACTAAGACAGTGCCAGTGAAGGTGGAGGGAAGGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR GCA 90 bp ATGTCAGCCAAGGCACCTGTGGTCAATCTGGTTTCAGATCAGGGCTaGAAGTGTTCCACAGACTGCAGAGAGGCACAGAGATTCTCCTTC +
Preference number: 1 (lower is better)
Translates to: MSAKAPVVNLVSDQG*KCSTDCREAQRFSF
Trigger: GAAGGAGAATCTCTGTGCCTCTCTGCAGTCTGTGGAACACTTGCAGCCCTGATCTGAAACCAGATTGACCACAGGTGCCTTGGCTGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR CCA 90 bp CTGATCCAGCCCAGCCTTTCCCAATCTGTCCTTCAGCCTGTGCTTTaGAGAACTACCTCTCTAGAGCATATACCTAAGCATGCCACACCT +
Preference number: 1 (lower is better)
Translates to: LIQPSLSQSVLQPVL*RTTSLEHIPKHATP
Trigger: AGGTGTGGCATGCTTAGGTATATGCTCTAGAGAGGTAGTTCTCCAAAGCACAGGCTGAAGGACAGATTGGGAAAGGCTGGGCTGGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR GCA 90 bp CCTTTCTCTGCCACTCTCATTCCTCCAGCTAATCCCGCAGTCGATTaGCCAATTCAGAAACCTGGAGACGTTGACTCCTTCCTCATTAAC +
Preference number: 1 (lower is better)
Translates to: PFSATLIPPANPAVD*PIQKPGDVDSFLIN
Trigger: GTTAATGAGGAAGGAGTCAACGTCTCCAGGTTTCTGAATTGGGCAATCGACTGCGGGATTAGCTGGAGGAATGAGAGTGGCAGAGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR TCA 90 bp ATGTCGATGCCATCACAGTTTCTCTGCACCATATTCCTCTCAGGCTaGAGAGCCGGGAGTCTGGTGAAAAATGGAACAGAAAGTGTGGGA +
Preference number: 1 (lower is better)
Translates to: MSMPSQFLCTIFLSG*RAGSLVKNGTESVG
Trigger: TCCCACACTTTCTGTTCCATTTTTCACCAGACTCCCGGCTCTTCAGCCTGAGAGGAATATGGTGCAGAGAAACTGTGATGGCATCGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR CCA 90 bp AAGTCATTTCTCAGCACAGCGCTCAAGGACCTAACTGATCTTGCCTaGGACCATCTCTCAAGCTCCTGTCTTGCAGTGTTTCCTTTTCCA +
Preference number: 1 (lower is better)
Translates to: KSFLSTALKDLTDLA*DHLSSSCLAVFPFP
Trigger: TGGAAAAGGAAACACTGCAAGACAGGAGCTTGAGAGATGGTCCCAGGCAAGATCAGTTAGGTCCTTGAGCGCTGTGCTGAGAAATGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR GCA 90 bp TTTACACCATACAAGACTAGGCTGTTAGGGTTGTCCTGTGTGGTCTaGAGCCAGAGGTTACACTGTAACTACCATATGCAGGCCAGACAT +
Preference number: 1 (lower is better)
Translates to: FTPYKTRLLGLSCVV*SQRLHCNYHMQARH
Trigger: ATGTCTGGCCTGCATATGGTAGTTACAGTGTAACCTCTGGCTGCAGACCACACAGGACAACCCTAACAGCCTAGTCTTGTATGGTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR CCA 90 bp TCATCTTTCCCTAAATCCGATCCTCTCCTTGAAGTTCTTCCCTTGTaGCATTATCATGCAAGCCAGAAATGTGGAGTCACTGCCTTTCTC +
Preference number: 1 (lower is better)
Translates to: SSFPKSDPLLEVLPL*HYHASQKCGVTAFL
Trigger: GAGAAAGGCAGTGACTCCACATTTCTGGCTTGCATGATAATGCCACAAGGGAAGAACTTCAAGGAGAGGATCGGATTTAGGGAAAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR TCA 90 bp ATTCCGACATCCCACAAGGCACCTCAAATTTCACATGTCCAAATCTaGGCTCATCTTTCCCTAAATCCGATCCTCTCCTTGAAGTTCTTC +
Preference number: 1 (lower is better)
Translates to: IPTSHKAPQISHVQI*AHLSLNPILSLKFF
Trigger: GAAGAACTTCAAGGAGAGGATCGGATTTAGGGAAAGATGAGCTCAGATTTGGACATGTGAAATTTGAGGTGCCTTGTGGGATGTCGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR TCA 90 bp CTGAAATCCATTCCCATCCCCAGGGCCATGAGTCTAGCCTCACCATTCCCTCATATATTCCTCTCAGGCTaGAGAGCCGGGAGTCTGGTG +
Preference number: 2 (lower is better)
Translates to: LKSIPIPRAMSLASPFPHIFLSG*RAGSLV
Trigger: CACCAGACTCCCGGCTCTTCAGCCTGAGAGGAATAT...ATGAGGGAATGGTGAGGCTAGACTCATGGCCCTGGGGATGGGAATGGATTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR GCA 90 bp CTAAGCAGTCCCCTAGTGGTGGTGATGATGTATGCCTCCATCCCTTCCCTCCACTTCCTCATTAACTCCTaGGTCTGGTTGGCCTGCAAG +
Preference number: 2 (lower is better)
Translates to: LSSPLVVVMMYASIPSLHFLINS*VWLACK
Trigger: CTTGCAGGCCAACCAGACGCAGGAGTTAATGAGGAA...GTGGAGGGAAGGGATGGAGGCATACATCATCACCACCACTAGGGGACTGCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR CCA 90 bp TTCCCCTTCGTTGATCTCTTCCACCAGCAAATCCCCAGCCAATCATCTGCCCCCTCCCTCCACCTTCACTaGCACTGTCTTAGTTCAGGT +
Preference number: 2 (lower is better)
Translates to: FPFVDLFHQQIPSQSSAPSLHLH*HCLSSG
Trigger: ACCTGAACTAAGACAGTGCCAGTGAAGGTGGAGGGA...GGGGGCAGATGATTGGCTGGGGATTTGCTGGTGGAAGAGATCAACGAAGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR TCA 90 bp CTAAGCAGTCCCCTAGTGGTGGTGATGATGTATGCCTCCATCCCTTCCCTCCACAGTTCAGGTCTGCATTaGCGCATATCCTTTCTCTGC +
Preference number: 2 (lower is better)
Translates to: LSSPLVVVMMYASIPSLHSSGLH*RISFLC
Trigger: GCAGAGAAAGGATATGCGTCAATGCAGACCTGAACT...GTGGAGGGAAGGGATGGAGGCATACATCATCACCACCACTAGGGGACTGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR GCA 90 bp CACCCCTCAACAAAGAGTCTGAAGTTAGCTTGTCTACCCCATGAAGGGCCTGGGCTGTCCTTCAGCCTGTaGTTTGGAGAACTACCTCTC +
Preference number: 2 (lower is better)
Translates to: HPSTKSLKLACLPHEGPGLSFSL*FGELPL
Trigger: GAGAGGTAGTTCTCCAAAGCACAGGCTGAAGGACAG...CCCAGGCCCTTCATGGGGTAGACAAGCTAACTTCAGACTCTTTGTTGAGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR TCA 90 bp ATAACATCTGTTGACTACCAGACTTCACTGAAATCGGCCGTCTGCTCTCCTGAGGTTCTGAAGACCTGCTaGTCACTCCTGGTCTCTGCC +
Preference number: 2 (lower is better)
Translates to: ITSVDYQTSLKSAVCSPEVLKTC*SLLVSA
Trigger: GGCAGAGACCAGGAGTGATCAGCAGGTCTTCAGAAC...CTCAGGAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGTCAACAGATGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR GCA 90 bp GGAGACCCAGAAAACAGACTAGACCAATCCTCCTGTCCCCAGTCTAATTCTGAGGGTGGTGATGATGTATaGCTCCATCCCTTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: GDPENRLDQSSCPQSNSEGGDDV*LHPFPP
Trigger: TGGAGGGAAGGGATGGAGGCATACATCATCACCACC...CTCAGAATTAGACTGGGGACAGGAGGATTGGTCTAGTCTGTTTTCTGGGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR GCA 90 bp CAGCAGCGTGAACTGAAGCTCTCCACCTTCCTGCACTTTTCTGAAATGTCAGAAAGCATGCCACACCTCTaGTTCAGAGCTTTCATCTGG +
Preference number: 2 (lower is better)
Translates to: QQRELKLSTFLHFSEMSESMPHL*FRAFIW
Trigger: CCAGATGAAAGCTCTGAAGCAGAGGTGTGGCATGCT...TTCTGACATTTCAGAAAAGTGCAGGAAGGTGGAGAGCTTCAGTTCACGCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR GCA 90 bp GAACAAAGGAAAACCACGAGCACACTGTCTCTGATTTGGACAGGCTCAAAGGCTGTTTCAGATCAGGGCTaGAAGTGTTCCACAGACTGC +
Preference number: 2 (lower is better)
Translates to: EQRKTTSTLSLIWTGSKAVSDQG*KCSTDC
Trigger: GCAGTCTGTGGAACACTTGCAGCCCTGATCTGAAAC...AGCCTTTGAGCCTGTCCAAATCAGAGACAGTGTGCTCGTGGTTTTCCTTTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR TCA 90 bp TCGCATTTCCAGTGCAGATTCCCCTGTGAGCTCCACATTGCAAATACCTCATTCCTTTGCTCTTCTATCTaGTTGTGGCAGATCAGGCTC +
Preference number: 2 (lower is better)
Translates to: SHFQCRFPCELHIANTSFLCSSI*LWQIRL
Trigger: GAGCCTGATCTGCCACAATCAGATAGAAGAGCAAAG...GAATGAGGTATTTGCAATGTGGAGCTCACAGGGGAATCTGCACTGGAAATGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR GCA 90 bp CGCATTTCCAGTGCAGATTCCCCTGTGAGCTCCACATTGCAAATACCTCATTCCTGCGTCTGGTTGGCCTaGAAGTCCTATACATTCTAT +
Preference number: 2 (lower is better)
Translates to: RISSADSPVSSTLQIPHSCVWLA*KSYTFY
Trigger: ATAGAATGTATAGGACTTGCAGGCCAACCAGACGCA...GGAATGAGGTATTTGCAATGTGGAGCTCACAGGGGAATCTGCACTGGAAATGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR TCA 90 bp TCGCATTTCCAGTGCAGATTCCCCTGTGAGCTCCACATTGCAAATACCTCATTCCTTAAAACCATTCCCTaGAATCCATTCCCATCCCCA +
Preference number: 2 (lower is better)
Translates to: SHFQCRFPCELHIANTSFLKTIP*NPFPSP
Trigger: TGGGGATGGGAATGGATTTCAGGGAATGGTTTTAAG...GAATGAGGTATTTGCAATGTGGAGCTCACAGGGGAATCTGCACTGGAAATGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR GCA 90 bp TCGCATTTCCAGTGCAGATTCCCCTGTGAGCTCCACATTGCAAATACCTCATTCCCACCAATATGTCGATaGCATCACAGTTTCTCTGCA +
Preference number: 2 (lower is better)
Translates to: SHFQCRFPCELHIANTSFPPICR*HHSFSA
Trigger: TGCAGAGAAACTGTGATGGCATCGACATATTGGTGG...GAATGAGGTATTTGCAATGTGGAGCTCACAGGGGAATCTGCACTGGAAATGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR GCA 90 bp CAGCAGCGTGAACTGAAGCTCTCCACCTTCCTGCACTTTTCTGAAATGTCAGAACTCAAGCTCCTGTCTTaGAGTGTTTCCTTTTCCACT +
Preference number: 2 (lower is better)
Translates to: QQRELKLSTFLHFSEMSELKLLS*SVSFST
Trigger: AGTGGAAAAGGAAACACTGCAAGACAGGAGCTTGAG...TTCTGACATTTCAGAAAAGTGCAGGAAGGTGGAGAGCTTCAGTTCACGCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR CAA 90 bp GCTGTACTCTTGATATTTACACCATACAAGACTAGGCTGTTAGGGTaGTCCTGTGTGGTCTGCAGCCAGAGGTTACACTGTAACTACCAT +
Preference number: 2 (lower is better)
Translates to: AVLLIFTPYKTRLLG*SCVVCSQRLHCNYH
Trigger: ATGGTAGTTACAGTGTAACCTCTGGCTGCAGACCACACAGGACAACCCTAACAGCCTAGTCTTGTATGGTGTAAATATCAAGAGTACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR GCA 90 bp GTCTGCAGCCAGAGGTTACACTGTAACTACCATATGCAGGCCAGACATTCATTCGTACGTGACCTCTTGTaGTTTTTGTTAGAGTCTGCA +
Preference number: 2 (lower is better)
Translates to: VCSQRLHCNYHMQARHSFVRDLL*FLLESA
Trigger: TGCAGACTCTAACAAAAAGCACAAGAGGTCACGTAC...GAATGAATGTCTGGCCTGCATATGGTAGTTACAGTGTAACCTCTGGCTGCAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR TCA 90 bp ATAACATCTGTTGACTACCAGACTTCACTGAAATCGGCCGTCTGCTCTCCTGAGGTAACTCCAAGATCCTaGAAATGGTTCTTGTATTGC +
Preference number: 2 (lower is better)
Translates to: ITSVDYQTSLKSAVCSPEVTPRS*KWFLYC
Trigger: GCAATACAAGAACCATTTTCAGGATCTTGGAGTTAC...CTCAGGAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGTCAACAGATGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR TCA 90 bp GGACTGAATTACACTATAAGGTGTAACACTGGACCGAAGACTTTTCCATTAAAAGTTCTGAAGACCTGCTaGTCACTCCTGGTCTCTGCC +
Preference number: 2 (lower is better)
Translates to: GLNYTIRCNTGPKTFPLKVLKTC*SLLVSA
Trigger: GGCAGAGACCAGGAGTGATCAGCAGGTCTTCAGAAC...TTTTAATGGAAAAGTCTTCGGTCCAGTGTTACACCTTATAGTGTAATTCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR GCA 90 bp AGCCAGAGGAGATGCACTGAGACTGAAATAACATCTGTTGACTACCAGACTTCAATCACTCCTGGTCTCTaGCTGAGTGTGTTAATGTCA +
Preference number: 2 (lower is better)
Translates to: SQRRCTETEITSVDYQTSITPGL*LSVLMS
Trigger: TGACATTAACACACTCAGGCAGAGACCAGGAGTGAT...TGAAGTCTGGTAGTCAACAGATGTTATTTCAGTCTCAGTGCATCTCCTCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR GCA 90 bp ATCAAGCCAGTTGGCAGTTCTAAGGCTTCTTTATCAGCATATTACAGAGTTTGTATGTGGCCAAGAGGCTaGGAATGGGTTTGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: IKPVGSSKASLSAYYRVCMWPRG*EWVCCV
Trigger: CACACAGCAAACCCATTCGCAGCCTCTTGGCCACAT...ACAAACTCTGTAATATGCTGATAAAGAAGCCTTAGAACTGCCAACTGGCTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR CCA 90 bp GGACTGAATTACACTATAAGGTGTAACACTGGACCGAAGACTTTTCCATTAAAACCTGCTGATCACTCCTaGTCTCTGCCTGAGTGTGTT +
Preference number: 2 (lower is better)
Translates to: GLNYTIRCNTGPKTFPLKPADHS*SLPECV
Trigger: AACACACTCAGGCAGAGACCAGGAGTGATCAGCAGG...TTTTAATGGAAAAGTCTTCGGTCCAGTGTTACACCTTATAGTGTAATTCAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR TCA 90 bp GGGAAACAAGCTATGCAACCATTTGACATTCTGTATTTTAGATGTAACAGTACTACTACCAGACTTCACTaGAATCGGCCGTCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: GKQAMQPFDILYFRCNSTTTRLH*NRPSAL
Trigger: GAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGT...AGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR CCA 90 bp AGCCAGAGGAGATGCACTGAGACTGAAATAACATCTGTTGACTACCAGACTTCACCCCATGGGAAATACTaGGGAAAGAATACAAATAGA +
Preference number: 2 (lower is better)
Translates to: SQRRCTETEITSVDYQTSPHGKY*GKNTNR
Trigger: TCTATTTGTATTCTTTCCCCAGTATTTCCCATGGGG...TGAAGTCTGGTAGTCAACAGATGTTATTTCAGTCTCAGTGCATCTCCTCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR CAA 90 bp GCGGGTGTGGGAGAAATTAGCTTACTAATTGAACCATCAAGCCAGTaGGCAGTTCTAAGGCTTCTTTATCAGCATATTACAGAGTTTGTA +
Preference number: 2 (lower is better)
Translates to: AGVGEISLLIEPSSQ*AVLRLLYQHITEFV
Trigger: TACAAACTCTGTAATATGCTGATAAAGAAGCCTTAGAACTGCCAACTGGCTTGATGGTTCAATTAGTAAGCTAATTTCTCCCACACCCGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR TCA 90 bp ATCAAGCCAGTTGGCAGTTCTAAGGCTTCTTTATCAGCATATTACAGAGTTTGTAGTCCTCCCTTAGTTTaGTTCTTGGCATCCTTCAGA +
Preference number: 2 (lower is better)
Translates to: IKPVGSSKASLSAYYRVCSPPLV*FLASFR
Trigger: TCTGAAGGATGCCAAGAATCAAACTAAGGGAGGACT...ACAAACTCTGTAATATGCTGATAAAGAAGCCTTAGAACTGCCAACTGGCTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR GCA 90 bp GAAGCTGTACTCTTGATATTTACACCATACAAGACTAGGCTGTTAGGGTTGTCCCAGACATTCATTCTGTaGTTAGGGACTGAATTACAC +
Preference number: 2 (lower is better)
Translates to: EAVLLIFTPYKTRLLGLSQTFIL*LGTELH
Trigger: GTGTAATTCAGTCCCTAAGCACAGAATGAATGTCTG...GGACAACCCTAACAGCCTAGTCTTGTATGGTGTAAATATCAAGAGTACAGCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR GCA 90 bp GAAGCTGTACTCTTGATATTTACACCATACAAGACTAGGCTGTTAGGGTTGTCCACTGTAACTACCATATaGAGGCCAGACATTCATTCT +
Preference number: 2 (lower is better)
Translates to: EAVLLIFTPYKTRLLGLSTVTTI*RPDIHS
Trigger: AGAATGAATGTCTGGCCTGCATATGGTAGTTACAGT...GGACAACCCTAACAGCCTAGTCTTGTATGGTGTAAATATCAAGAGTACAGCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR CCA 90 bp GAAGCTGTACTCTTGATATTTACACCATACAAGACTAGGCTGTTAGGGTTGTCCAAAACTCCAAACTTGTaGAGATCCCCATGGGAAATA +
Preference number: 2 (lower is better)
Translates to: EAVLLIFTPYKTRLLGLSKTPNL*RSPWEI
Trigger: TATTTCCCATGGGGATCTCCACAAGTTTGGAGTTTT...GGACAACCCTAACAGCCTAGTCTTGTATGGTGTAAATATCAAGAGTACAGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR GCA 90 bp TTCTCCTTTCACTTATTGAACAGTAAGCACAACCTCCTAATCACAGCTCCTAAAAGCTTTCATCTGGGTTaGCCATTGCCTTTTGGAAAA +
Preference number: 2 (lower is better)
Translates to: FSFHLLNSKHNLLITAPKSFHLG*PLPFGK
Trigger: TTTTCCAAAAGGCAATGGGCAACCCAGATGAAAGCT...TTTAGGAGCTGTGATTAGGAGGTTGTGCTTACTGTTCAATAAGTGAAAGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR CCA 90 bp ATCAAGCCAGTTGGCAGTTCTAAGGCTTCTTTATCAGCATATTACAGAGTTTGTTTTTCCTCCTTGTTGTaGGAAACAAGCTATGCAACC +
Preference number: 2 (lower is better)
Translates to: IKPVGSSKASLSAYYRVCFSSLL*ETSYAT
Trigger: GGTTGCATAGCTTGTTTCCCACAACAAGGAGGAAAA...ACAAACTCTGTAATATGCTGATAAAGAAGCCTTAGAACTGCCAACTGGCTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR TCA 90 bp GGGAAACAAGCTATGCAACCATTTGACATTCTGTATTTTAGATGTAACAGTACTAGTCCTCCCTTAGTTTaGTTCTTGGCATCCTTCAGA +
Preference number: 2 (lower is better)
Translates to: GKQAMQPFDILYFRCNSTSPPLV*FLASFR
Trigger: TCTGAAGGATGCCAAGAATCAAACTAAGGGAGGACT...AGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR TCA 90 bp GGACTGAATTACACTATAAGGTGTAACACTGGACCGAAGACTTTTCCATTAAAATTATCCTTAAGATCTTaGGTGAGGGACATAGTCCAA +
Preference number: 2 (lower is better)
Translates to: GLNYTIRCNTGPKTFPLKLSLRS*VRDIVQ
Trigger: TTGGACTATGTCCCTCACTCAAGATCTTAAGGATAA...TTTTAATGGAAAAGTCTTCGGTCCAGTGTTACACCTTATAGTGTAATTCAGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR CAA 90 bp CCTGTTCTTTTCCTCCTTGTTGTGGGAAACAAGCTATGCAACCATTaGACATTCTGTATTTTAGATGTAACAGTACTTAATACTTGGCAA +
Preference number: 2 (lower is better)
Translates to: PVLFLLVVGNKLCNH*TFCILDVTVLNTWQ
Trigger: TTGCCAAGTATTAAGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCCACAACAAGGAGGAAAAGAACAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR TCA 90 bp GGGAAACAAGCTATGCAACCATTTGACATTCTGTATTTTAGATGTAACAGTACTTTATCCTTAAGATCTTaGGTGAGGGACATAGTCCAA +
Preference number: 2 (lower is better)
Translates to: GKQAMQPFDILYFRCNSTLSLRS*VRDIVQ
Trigger: TTGGACTATGTCCCTCACTCAAGATCTTAAGGATAA...AGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR CCA 90 bp GGGAAACAAGCTATGCAACCATTTGACATTCTGTATTTTAGATGTAACAGTACTATGGAGATGTATACTTaGTCTTGTTCATCTAAAGGA +
Preference number: 2 (lower is better)
Translates to: GKQAMQPFDILYFRCNSTMEMYT*SCSSKG
Trigger: TCCTTTAGATGAACAAGACCAAGTATACATCTCCAT...AGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR TCA 72 bp CCATTCCCTCATGTAACAGCTCCCAACGGGCTTTGCTaGTCCAGCCCAGCCTTTCCCAATCTGTCCTTCAGC +
Preference number: 3 (lower is better)
Translates to: PFPHVTAPNGLC*SSPAFPNLSFS
Trigger: GCTGAAGGACAGATTGGGAAAGGCTGGGCTGGATCAGCAAAGCCCGTTGGGAGCTGTTACATGAGGGAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR GCA 72 bp CCATCTAAGCAGTCCCCTAGTGGTGGTGATGATGTATaGCTCCATCCCTTCCCTCCACCTTCACTGGCACTG +
Preference number: 3 (lower is better)
Translates to: PSKQSPSGGDDV*LHPFPPPSLAL
Trigger: CAGTGCCAGTGAAGGTGGAGGGAAGGGATGGAGGCATACATCATCACCACCACTAGGGGACTGCTTAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR CAA 90 bp CTAAGCAGTCCCCTAGTGGTGGTGATGATGTATGCCTCCATCCCTTCCCTCCACAACTCCTGCGTCTGGTaGGCCTGCAAGTCCTATACA +
Preference number: 3 (lower is better)
Translates to: LSSPLVVVMMYASIPSLHNSCVW*ACKSYT
Trigger: TGTATAGGACTTGCAGGCCAACCAGACGCAGGAGTT...GTGGAGGGAAGGGATGGAGGCATACATCATCACCACCACTAGGGGACTGCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR CAA 90 bp CAAGCCAGAAATGTGGAGTCACTGCCTTTCTCCAATAACTCCTCCCATCTAAGCAGCTCCCAACGGGCTTaGCTGATCCAGCCCAGCCTT +
Preference number: 3 (lower is better)
Translates to: QARNVESLPFSNNSSHLSSSQRA*LIQPSL
Trigger: AAGGCTGGGCTGGATCAGCAAAGCCCGTTGGGAGCT...GCTTAGATGGGAGGAGTTATTGGAGAAAGGCAGTGACTCCACATTTCTGGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR GCA 72 bp GCCACTCTCATTCCTCCAGCTAATCCCGCAGTCGATTaGCCAATTCAGAAACCTGGAGACGTTGACTCCTTC +
Preference number: 3 (lower is better)
Translates to: ATLIPPANPAVD*PIQKPGDVDSF
Trigger: GAAGGAGTCAACGTCTCCAGGTTTCTGAATTGGGCAATCGACTGCGGGATTAGCTGGAGGAATGAGAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR CCA 72 bp CTCAGCACAGCGCTCAAGGACCTAACTGATCTTGCCTaGGACCATCTCTCAAGCTCCTGTCTTGCAGTGTTT +
Preference number: 3 (lower is better)
Translates to: LSTALKDLTDLA*DHLSSSCLAVF
Trigger: AAACACTGCAAGACAGGAGCTTGAGAGATGGTCCCAGGCAAGATCAGTTAGGTCCTTGAGCGCTGTGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR CAA 90 bp ATAACATCTGTTGACTACCAGACTTCACTGAAATCGGCCGTCTGCTCTCCTGAGACCACAGAAACCCTCTaGCTGGCCGGTATGGCTTGG +
Preference number: 3 (lower is better)
Translates to: ITSVDYQTSLKSAVCSPETTETL*LAGMAW
Trigger: CCAAGCCATACCGGCCAGCAAGAGGGTTTCTGTGGT...CTCAGGAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGTCAACAGATGTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR CAA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTACCACAGAAACCCTCTaGCTGGCCGGTATGGCTTGG +
Preference number: 3 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFTTETL*LAGMAW
Trigger: CCAAGCCATACCGGCCAGCAAGAGGGTTTCTGTGGT...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
3UTR-3UTR CAA 90 bp CTAAGCAGTCCCCTAGTGGTGGTGATGATGTATGCCTCCATCCCTTCCCTCCACTCTCAAGCTCCTGTCTaGCAGTGTTTCCTTTTCCAC +
Preference number: 3 (lower is better)
Translates to: LSSPLVVVMMYASIPSLHSQAPV*QCFLFH
Trigger: GTGGAAAAGGAAACACTGCAAGACAGGAGCTTGAGA...GTGGAGGGAAGGGATGGAGGCATACATCATCACCACCACTAGGGGACTGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR CAA 90 bp ATAACATCTGTTGACTACCAGACTTCACTGAAATCGGCCGTCTGCTCTCCTGAGACTAGGCTGTTAGGGTaGTCCTGTGTGGTCTGCAGC +
Preference number: 3 (lower is better)
Translates to: ITSVDYQTSLKSAVCSPETRLLG*SCVVCS
Trigger: GCTGCAGACCACACAGGACAACCCTAACAGCCTAGT...CTCAGGAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGTCAACAGATGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR CAA 90 bp TTCCCCTTCGTTGATCTCTTCCACCAGCAAATCCCCAGCCAATCATCTGCCCCCTCTTTCATGGGCTCTTaGTGCCAAACTAGACCAAAA +
Preference number: 3 (lower is better)
Translates to: FPFVDLFHQQIPSQSSAPSFMGS*CQTRPK
Trigger: TTTTGGTCTAGTTTGGCACAAAGAGCCCATGAAAGA...GGGGGCAGATGATTGGCTGGGGATTTGCTGGTGGAAGAGATCAACGAAGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR TCA 72 bp TCCCATAGGACTTCGGAGCATCTTTGCTCTTCTATCTaGTTGTGGCAGATCAGGCTCAAAGGCTGTTCCTGG +
Preference number: 3 (lower is better)
Translates to: SHRTSEHLCSSI*LWQIRLKGCSW
Trigger: CCAGGAACAGCCTTTGAGCCTGATCTGCCACAATCAGATAGAAGAGCAAAGATGCTCCGAAGTCCTATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR TCA 72 bp AAAGTCATTTCTCAGCACAGCGCTCAAGGACCTAACTaGTCTTGCCTGGGACCATCTCTCAAGCTCCTGTCT +
Preference number: 3 (lower is better)
Translates to: KVISQHSAQGPN*SCLGPSLKLLS
Trigger: AGACAGGAGCTTGAGAGATGGTCCCAGGCAAGATCAGTTAGGTCCTTGAGCGCTGTGCTGAGAAATGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR CAA 90 bp GAACAAAGGAAAACCACGAGCACACTGTCTCTGATTTGGACAGGCTCAAAGGCTCCTGTGAGCTCCACATaGCAAATACCTCATTCCGAC +
Preference number: 3 (lower is better)
Translates to: EQRKTTSTLSLIWTGSKAPVSST*QIPHSD
Trigger: GTCGGAATGAGGTATTTGCAATGTGGAGCTCACAGG...AGCCTTTGAGCCTGTCCAAATCAGAGACAGTGTGCTCGTGGTTTTCCTTTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR TCA 72 bp CCATCACAGTTTCTCTGCACCATATTCCTCTCAGGCTaGAGAGCCGGGAGTCTGGTGAAAAATGGAACAGAA +
Preference number: 3 (lower is better)
Translates to: PSQFLCTIFLSG*RAGSLVKNGTE
Trigger: TTCTGTTCCATTTTTCACCAGACTCCCGGCTCTTCAGCCTGAGAGGAATATGGTGCAGAGAAACTGTGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR TCA 72 bp GCTCCTAAATTCGCATTTCCAGTGCAGATTCCCCTGTaGGCTCCACATTGCAAATACCTCATTCCGACATCC +
Preference number: 3 (lower is better)
Translates to: APKFAFPVQIPL*APHCKYLIPTS
Trigger: GGATGTCGGAATGAGGTATTTGCAATGTGGAGCTCACAGGGGAATCTGCACTGGAAATGCGAATTTAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR GCA 72 bp TACAAGACTAGGCTGTTAGGGTTGTCCTGTGTGGTCTaGAGCCAGAGGTTACACTGTAACTACCATATGCAG +
Preference number: 3 (lower is better)
Translates to: YKTRLLGLSCVV*SQRLHCNYHMQ
Trigger: CTGCATATGGTAGTTACAGTGTAACCTCTGGCTGCAGACCACACAGGACAACCCTAACAGCCTAGTCTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR CCA 72 bp CCCAGCCTTTCCCAATCTGTCCTTCAGCCTGTGCTTTaGAGAACTACCTCTCTAGAGCATATACCTAAGCAT +
Preference number: 3 (lower is better)
Translates to: PSLSQSVLQPVL*RTTSLEHIPKH
Trigger: ATGCTTAGGTATATGCTCTAGAGAGGTAGTTCTCCAAAGCACAGGCTGAAGGACAGATTGGGAAAGGCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR CAA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCACCACAGAAACCCTCTaGCTGGCCGGTATGGCTTGG +
Preference number: 3 (lower is better)
Translates to: KTSVTVILKILSEGHSPTTTETL*LAGMAW
Trigger: CCAAGCCATACCGGCCAGCAAGAGGGTTTCTGTGGT...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
3UTR GCA 72 bp GACTCCTTCCTCATTAACTCCTGCGTCTGGTTGGCCTaGAAGTCCTATACATTCTATCTCCTTGATAGCTCT +
Preference number: 3 (lower is better)
Translates to: DSFLINSCVWLA*KSYTFYLLDSS
Trigger: AGAGCTATCAAGGAGATAGAATGTATAGGACTTGCAGGCCAACCAGACGCAGGAGTTAATGAGGAAGGAGTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR CCA 72 bp TTTTTCAAATGTCAGCCAAGGCACCTGTGGTCAATCTaGTTTCAGATCAGGGCTGCAAGTGTTCCACAGACT +
Preference number: 3 (lower is better)
Translates to: FFKCQPRHLWSI*FQIRAASVPQT
Trigger: AGTCTGTGGAACACTTGCAGCCCTGATCTGAAACCAGATTGACCACAGGTGCCTTGGCTGACATTTGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR-3UTR CAA 90 bp ATAACATCTGTTGACTACCAGACTTCACTGAAATCGGCCGTCTGCTCTCCTGAGGTTATCCTTAAGATCTaGAGTGAGGGACATAGTCCA +
Preference number: 3 (lower is better)
Translates to: ITSVDYQTSLKSAVCSPEVILKI*SEGHSP
Trigger: TGGACTATGTCCCTCACTCAAGATCTTAAGGATAAC...CTCAGGAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGTCAACAGATGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR CAA 90 bp ATAACATCTGTTGACTACCAGACTTCACTGAAATCGGCCGTCTGCTCTCCTGAGATAGTACGTGACCTCTaGTGCTTTTTGTTAGAGTCT +
Preference number: 3 (lower is better)
Translates to: ITSVDYQTSLKSAVCSPEIVRDL*CFLLES
Trigger: AGACTCTAACAAAAAGCACAAGAGGTCACGTACTAT...CTCAGGAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGTCAACAGATGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR TCA 72 bp CTACCAGACTTCACTGAAATCGGCCGTCTGCTCTCCTaGGTTGGCATTGTTGCTAAGATAAAGCAAATGAAA +
Preference number: 3 (lower is better)
Translates to: LPDFTEIGRLLS*VGIVAKIKQMK
Trigger: TTTCATTTGCTTTATCTTAGCAACAATGCCAACTCAGGAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR CAA 90 bp ATCAAGCCAGTTGGCAGTTCTAAGGCTTCTTTATCAGCATATTACAGAGTTTGTGAGTCCTCCCTTAGTTaGATTCTTGGCATCCTTCAG +
Preference number: 3 (lower is better)
Translates to: IKPVGSSKASLSAYYRVCESSLS*ILGILQ
Trigger: CTGAAGGATGCCAAGAATCAAACTAAGGGAGGACTC...ACAAACTCTGTAATATGCTGATAAAGAAGCCTTAGAACTGCCAACTGGCTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR CAA 90 bp ATCAAGCCAGTTGGCAGTTCTAAGGCTTCTTTATCAGCATATTACAGAGTTTGTAGGCTGCGAATGGGTTaGCTGTGTGTAGATAAACAG +
Preference number: 3 (lower is better)
Translates to: IKPVGSSKASLSAYYRVCRLRMG*LCVDKQ
Trigger: CTGTTTATCTACACACAGCAAACCCATTCGCAGCCT...ACAAACTCTGTAATATGCTGATAAAGAAGCCTTAGAACTGCCAACTGGCTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR TCA 72 bp ATTCACAAGTTCTTAATAAATAGTTGCAGTTCCTCCTaGAGATGCTGGGTAAAGTGCAGAGAGAAGCACCAC +
Preference number: 3 (lower is better)
Translates to: IHKFLINSCSSS*RCWVKCREKHH
Trigger: GTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAGGAACTGCAACTATTTATTAAGAACTTGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
3UTR-3UTR CAA 90 bp AGCCAGAGGAGATGCACTGAGACTGAAATAACATCTGTTGACTACCAGACTTCAAAAATGGTTCTTGTATaGCCAGAAGAATTTCAGTGC +
Preference number: 3 (lower is better)
Translates to: SQRRCTETEITSVDYQTSKMVLV*PEEFQC
Trigger: GCACTGAAATTCTTCTGGCAATACAAGAACCATTTT...TGAAGTCTGGTAGTCAACAGATGTTATTTCAGTCTCAGTGCATCTCCTCTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR CAA 90 bp GGACTGAATTACACTATAAGGTGTAACACTGGACCGAAGACTTTTCCATTAAAAGTTATCCTTAAGATCTaGAGTGAGGGACATAGTCCA +
Preference number: 3 (lower is better)
Translates to: GLNYTIRCNTGPKTFPLKVILKI*SEGHSP
Trigger: TGGACTATGTCCCTCACTCAAGATCTTAAGGATAAC...TTTTAATGGAAAAGTCTTCGGTCCAGTGTTACACCTTATAGTGTAATTCAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR CAA 90 bp ATCAAGCCAGTTGGCAGTTCTAAGGCTTCTTTATCAGCATATTACAGAGTTTGTATAGTACGTGACCTCTaGTGCTTTTTGTTAGAGTCT +
Preference number: 3 (lower is better)
Translates to: IKPVGSSKASLSAYYRVCIVRDL*CFLLES
Trigger: AGACTCTAACAAAAAGCACAAGAGGTCACGTACTAT...ACAAACTCTGTAATATGCTGATAAAGAAGCCTTAGAACTGCCAACTGGCTTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR GCA 72 bp CCTGTTCTTTTCCTCCTTGTTGTGGGAAACAAGCTATaGAACCATTTGACATTCTGTATTTTAGATGTAACA +
Preference number: 3 (lower is better)
Translates to: PVLFLLVVGNKL*NHLTFCILDVT
Trigger: TGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCCACAACAAGGAGGAAAAGAACAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR-3UTR CAA 90 bp GGGAAACAAGCTATGCAACCATTTGACATTCTGTATTTTAGATGTAACAGTACTGACCTCTTGTGCTTTTaGTTAGAGTCTGCAAAGTTT +
Preference number: 3 (lower is better)
Translates to: GKQAMQPFDILYFRCNSTDLLCF*LESAKF
Trigger: AAACTTTGCAGACTCTAACAAAAAGCACAAGAGGTC...AGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR TCA 72 bp GTAAATCCAGTACCGCTAAATTTGTATAATAGTACGTaGCCTCTTGTGCTTTTTGTTAGAGTCTGCAAAGTT +
Preference number: 3 (lower is better)
Translates to: VNPVPLNLYNST*PLVLFVRVCKV
Trigger: AACTTTGCAGACTCTAACAAAAAGCACAAGAGGTCACGTACTATTATACAAATTTAGCGGTACTGGATTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR TCA 72 bp AGAGGTCTACTTATTAGATGTAAGCAAGTTTCAGATTaGCAAACAGAAGGTATATGGCTAAGTCAGTATTGT +
Preference number: 3 (lower is better)
Translates to: RGLLIRCKQVSD*QTEGIWLSQYC
Trigger: ACAATACTGACTTAGCCATATACCTTCTGTTTGTCAATCTGAAACTTGCTTACATCTAATAAGTAGACCTCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp CCTGAAATCCATTCCCATCCCCAGGGCCATGAGTCTAGCCTCACCATTCCCTCAGGGACCGGGTGCCTTTaGCGCCTTTGGGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PEIHSHPQGHESSLTIPSGTGCL*RLWGGG
Trigger: GCCCCCACCCCAAAGGCGCCAAAGGCACCCGGTCCC...TGAGGGAATGGTGAGGCTAGACTCATGGCCCTGGGGATGGGAATGGATTTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CCA 90 bp TTCCCCTTCGTTGATCTCTTCCACCAGCAAATCCCCAGCCAATCATCTGCCCCCGGTCATGGTGGGGCCTaGGCGGGGAGCGAGGTACTG +
Preference number: 4 (lower is better)
Translates to: FPFVDLFHQQIPSQSSAPGHGGA*AGSEVL
Trigger: CAGTACCTCGCTCCCCGCCCAGGCCCCACCATGACC...GGGGGCAGATGATTGGCTGGGGATTTGCTGGTGGAAGAGATCAACGAAGGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCTCCGCGGAGGCTCCCTaGTTACCGGCGGTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCSAEAP*LPAVPR
Trigger: CCGAGGCACCGCCGGTAAGCAGGGAGCCTCCGCGGA...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
CDS-3UTR GCA 90 bp CCTGAAATCCATTCCCATCCCCAGGGCCATGAGTCTAGCCTCACCATTCCCTCATGCTCCGGGACCGGGTaGCTTTGGCGCCTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: PEIHSHPQGHESSLTIPSCSGTG*LWRLWG
Trigger: ACCCCAAAGGCGCCAAAGGCACCCGGTCCCGGAGCA...TGAGGGAATGGTGAGGCTAGACTCATGGCCCTGGGGATGGGAATGGATTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CCA 90 bp GTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCCTCTGAGCCCCCGCTaGTGGCGAGGCTCACGGGCC +
Preference number: 4 (lower is better)
Translates to: VTVILKILSEGHSPTPVGPLSPR*WRGSRA
Trigger: GGCCCGTGAGCCTCGCCACCAGCGGGGGCTCAGAGG...CCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp CACCCCTCAACAAAGAGTCTGAAGTTAGCTTGTCTACCCCATGAAGGGCCTGGGCCTGCTTACCGGCGGTaGCTCGGGACGGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: HPSTKSLKLACLPHEGPGPAYRR*LGTVGF
Trigger: GAAGCCAACCGTCCCGAGGCACCGCCGGTAAGCAGG...CCCAGGCCCTTCATGGGGTAGACAAGCTAACTTCAGACTCTTTGTTGAGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp GTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGTCCGCGGAGGCTCCCTaGTTACCGGCGGTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: VTVILKILSEGHSPTPVGSAEAP*LPAVPR
Trigger: CCGAGGCACCGCCGGTAAGCAGGGAGCCTCCGCGGA...CCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp CTAAGCAGTCCCCTAGTGGTGGTGATGATGTATGCCTCCATCCCTTCCCTCCACCTCCATGCCTCTCGCTaGGGCAGGACTCACCAAGGG +
Preference number: 4 (lower is better)
Translates to: LSSPLVVVMMYASIPSLHLHASR*GRTHQG
Trigger: CCCTTGGTGAGTCCTGCCGCAGCGAGAGGCATGGAG...GTGGAGGGAAGGGATGGAGGCATACATCATCACCACCACTAGGGGACTGCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCGGGCGGCCTTCTCCATaGCTCTCGCTGCGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCGRPSP*LSLRQD
Trigger: GTCCTGCCGCAGCGAGAGGCATGGAGAAGGCCGCCC...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366965.6
CDS-3UTR CCA 90 bp ATAACATCTGTTGACTACCAGACTTCACTGAAATCGGCCGTCTGCTCTCCTGAGCCTCTGAGCCCCCGCTaGTGGCGAGGCTCACGGGCC +
Preference number: 4 (lower is better)
Translates to: ITSVDYQTSLKSAVCSPEPLSPR*WRGSRA
Trigger: GGCCCGTGAGCCTCGCCACCAGCGGGGGCTCAGAGG...CTCAGGAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGTCAACAGATGTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCTGAGCCCCCGCTGGTaGCGAGGTCACCAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCLSPRW*RGHQGG
Trigger: TCCCCCTTGGTGACCTCGCCACCAGCGGGGGCTCAG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366966.6
CDS-3UTR CCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCCTCTGAGCCCCCGCTaGTGGCGAGGTCACCAAGGG +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCPLSPR*WRGHQG
Trigger: CCCTTGGTGACCTCGCCACCAGCGGGGGCTCAGAGG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366966.6
CDS-3UTR TCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCTTTGTCCTCCTCCTCTaGGCCCCCGCTGGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCFVLLL*APAGGE
Trigger: CTCGCCACCAGCGGGGGCTCAGAGGAGGAGGACAAA...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
CDS-3UTR GCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCGGTTGGCTTCATGGCTaGAGAGCCTCTCCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCGWLHG*RASPGG
Trigger: GCCGCCCGGAGAGGCTCTGCAGCCATGAAGCCAACC...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR GCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCCTGCTTACCGGCGGTaGCTCGGGACGGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCPAYRR*LGTVGF
Trigger: GAAGCCAACCGTCCCGAGGCACCGCCGGTAAGCAGG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
CDS-3UTR GCA 90 bp CAGCAGCGTGAACTGAAGCTCTCCACCTTCCTGCACTTTTCTGAAATGTCAGAATCCGCGGAGGCTCCCTaGTTACCGGCGGTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: QQRELKLSTFLHFSEMSESAEAP*LPAVPR
Trigger: CCGAGGCACCGCCGGTAAGCAGGGAGCCTCCGCGGA...TTCTGACATTTCAGAAAAGTGCAGGAAGGTGGAGAGCTTCAGTTCACGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CCA 90 bp ACCTTCACTGGCACTGTCTTAGTTCAGGTCTGCATTGACGCATATCCTTTCTCTCCTCTGAGCCCCCGCTaGTGGCGAGGCTCACGGGCC +
Preference number: 4 (lower is better)
Translates to: TFTGTVLVQVCIDAYPFSPLSPR*WRGSRA
Trigger: GGCCCGTGAGCCTCGCCACCAGCGGGGGCTCAGAGG...AGAGAAAGGATATGCGTCAATGCAGACCTGAACTAAGACAGTGCCAGTGAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CCA 90 bp TCATTCCTCCAGCTAATCCCGCAGTCGATTGCCCAATTCAGAAACCTGGAGACGTGCCTTTGGCGCCTTTaGGGTGGGGGCAGCGGTGAG +
Preference number: 4 (lower is better)
Translates to: SFLQLIPQSIAQFRNLETCLWRL*GGGSGE
Trigger: CTCACCGCTGCCCCCACCCCAAAGGCGCCAAAGGCA...CGTCTCCAGGTTTCTGAATTGGGCAATCGACTGCGGGATTAGCTGGAGGAATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR TCA 90 bp CAGCCTTTCCCAATCTGTCCTTCAGCCTGTGCTTTGGAGAACTACCTCTCTAGATTTGTCCTCCTCCTCTaGGCCCCCGCTGGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: QPFPICPSACALENYLSRFVLLL*APAGGE
Trigger: CTCGCCACCAGCGGGGGCTCAGAGGAGGAGGACAAA...TCTAGAGAGGTAGTTCTCCAAAGCACAGGCTGAAGGACAGATTGGGAAAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR TCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCGGAAGCCGCTCTTGTTaGCGTGGAACAGCACCCCGC +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCGSRSC*RGTAPR
Trigger: GCGGGGTGCTGTTCCACGTCAACAAGAGCGGCTTCC...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
CDS-3UTR TCA 90 bp CTGAAATCCATTCCCATCCCCAGGGCCATGAGTCTAGCCTCACCATTCCCTCATTGCAGGAGGCTTCGCTaGACAGCTGTGGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: LKSIPIPRAMSLASPFPHCRRLR*TAVADS
Trigger: GGAGTCAGCCACAGCTGTTCAGCGAAGCCTCCTGCA...ATGAGGGAATGGTGAGGCTAGACTCATGGCCCTGGGGATGGGAATGGATTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCAGCCCTGCGGCTCATaGCCAATGAGCCATAGCGGC +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCQPCGS*PMSHSG
Trigger: GCCGCTATGGCTCATTGGGCATGAGCCGCAGGGCTG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR GCA 90 bp CTGAAATCCATTCCCATCCCCAGGGCCATGAGTCTAGCCTCACCATTCCCTCATTGCACCTTGGCCACGTaGATCCACATGCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LKSIPIPRAMSLASPFPHCTLAT*IHMRSQ
Trigger: CTGGGAGCGCATGTGGATGCACGTGGCCAAGGTGCA...ATGAGGGAATGGTGAGGCTAGACTCATGGCCCTGGGGATGGGAATGGATTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp ATTCCTCTCAGGCTGAAGAGCCGGGAGTCTGGTGAAAAATGGAACAGAAAGTGTGGGCGGCCTTCTCCATaGCTCTCGCTGCGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: IPLRLKSRESGEKWNRKCGRPSP*LSLRQD
Trigger: GTCCTGCCGCAGCGAGAGGCATGGAGAAGGCCGCCC...ACACTTTCTGTTCCATTTTTCACCAGACTCCCGGCTCTTCAGCCTGAGAGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCGGACGGTTGGCTTCATaGCTGCAGAGCCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCGRLAS*LQSLSG
Trigger: CCCGGAGAGGCTCTGCAGCCATGAAGCCAACCGTCC...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp CTGAAATCCATTCCCATCCCCAGGGCCATGAGTCTAGCCTCACCATTCCCTCATCGCCTGGAGCCAGTCTaGGATCGTCATCGACAGCCT +
Preference number: 4 (lower is better)
Translates to: LKSIPIPRAMSLASPFPHRLEPV*DRHRQP
Trigger: AGGCTGTCGATGACGATCCCAGACTGGCTCCAGGCG...ATGAGGGAATGGTGAGGCTAGACTCATGGCCCTGGGGATGGGAATGGATTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCGTGCCTCGGGACGGTTaGCTTCATGGCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCVPRDG*LHGCRA
Trigger: GGCTCTGCAGCCATGAAGCCAACCGTCCCGAGGCAC...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
CDS-3UTR CCA 90 bp ATAACATCTGTTGACTACCAGACTTCACTGAAATCGGCCGTCTGCTCTCCTGAGGGTCATGGTGGGGCCTaGGCGGGGAGCGAGGTACTG +
Preference number: 4 (lower is better)
Translates to: ITSVDYQTSLKSAVCSPEGHGGA*AGSEVL
Trigger: CAGTACCTCGCTCCCCGCCCAGGCCCCACCATGACC...CTCAGGAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGTCAACAGATGTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366965.6
CDS-3UTR TCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCGCGGCTCATGCCCAATaGGCCATAGCGGCCATTGCA +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCAAHAQ*AIAAIA
Trigger: TGCAATGGCCGCTATGGCTCATTGGGCATGAGCCGC...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR TCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCAGAAGGCGGCGTTCCTaGTGGCGCCCACCATTTCTC +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCRRRRS*WRPPFL
Trigger: GAGAAATGGTGGGCGCCATCAGGAACGCCGCCTTCT...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
CDS-3UTR GCA 90 bp AAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCCAGCCCTGCGGCTCATaGCCAATGAGCCATAGCGGC +
Preference number: 4 (lower is better)
Translates to: KILSEGHSPTPVGLITSAQPCGS*PMSHSG
Trigger: GCCGCTATGGCTCATTGGGCATGAGCCGCAGGGCTG...GGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR GCA 90 bp GTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCAGCCCTGCGGCTCATaGCCAATGAGCCATAGCGGC +
Preference number: 4 (lower is better)
Translates to: VTVILKILSEGHSPTPVGQPCGS*PMSHSG
Trigger: GCCGCTATGGCTCATTGGGCATGAGCCGCAGGGCTG...CCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR GCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCCATCAGCTCAGCCCTaGGGCTCATGCCCAATGAGC +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCPSAQP*GSCPMS
Trigger: GCTCATTGGGCATGAGCCGCAGGGCTGAGCTGATGG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR GCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCCACGTGCATCCACATaGGCTCCCAGGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCPRAST*APRCGC
Trigger: ACAGCCACACCTGGGAGCGCATGTGGATGCACGTGG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
CDS-3UTR GCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCTGCACCTTGGCCACGTaGATCCACATGCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCCTLAT*IHMRSQ
Trigger: CTGGGAGCGCATGTGGATGCACGTGGCCAAGGTGCA...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
CDS-3UTR CCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCGCCTGGAGCCAGTCTaGGATCGTCATCGACAGCCT +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCRLEPV*DRHRQP
Trigger: AGGCTGTCGATGACGATCCCAGACTGGCTCCAGGCG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCCCCGGCTTCTCACTTaGGTCGGAGAGTGGGCACTT +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCPRLLT*VGEWAL
Trigger: AAGTGCCCACTCTCCGACCCAAGTGAGAAGCCGGGG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp GTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGGTGCCTCGGGACGGTTaGCTTCATGGCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VTVILKILSEGHSPTPVGVPRDG*LHGCRA
Trigger: GGCTCTGCAGCCATGAAGCCAACCGTCCCGAGGCAC...CCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCCGCTCTTGTTGACGTaGAACAGCACCCCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCPLLLT*NSTPPS
Trigger: AGACGGCGGGGTGCTGTTCCACGTCAACAAGAGCGG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
CDS-3UTR CCA 90 bp CCTGAAATCCATTCCCATCCCCAGGGCCATGAGTCTAGCCTCACCATTCCCTCATTCCCAGCTTCCTGCTaGGTTCCCCAGGCACATGTT +
Preference number: 4 (lower is better)
Translates to: PEIHSHPQGHESSLTIPSFPASC*VPQAHV
Trigger: AACATGTGCCTGGGGAACCCAGCAGGAAGCTGGGAA...TGAGGGAATGGTGAGGCTAGACTCATGGCCCTGGGGATGGGAATGGATTTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR TCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCATGGGCTGGAAGCTATaGGGCTCATGGGGGACGTAC +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCMGWKL*GSWGTY
Trigger: GTACGTCCCCCATGAGCCTCATAGCTTCCAGCCCAT...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR TCA 90 bp ATATACCTAAGCATGCCACACCTCTGCTTCAGAGCTTTCATCTGGGTTGCCCATGGAAGCCGCTCTTGTTaGCGTGGAACAGCACCCCGC +
Preference number: 4 (lower is better)
Translates to: IYLSMPHLCFRAFIWVAHGSRSC*RGTAPR
Trigger: GCGGGGTGCTGTTCCACGTCAACAAGAGCGGCTTCC...ATGGGCAACCCAGATGAAAGCTCTGAAGCAGAGGTGTGGCATGCTTAGGTATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR TCA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTGGAAGCCGCTCTTGTTaGCGTGGAACAGCACCCCGC +
Preference number: 4 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFGSRSC*RGTAPR
Trigger: GCGGGGTGCTGTTCCACGTCAACAAGAGCGGCTTCC...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp ACCTTCACTGGCACTGTCTTAGTTCAGGTCTGCATTGACGCATATCCTTTCTCTGGTTGGCTTCATGGCTaGAGAGCCTCTCCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: TFTGTVLVQVCIDAYPFSGWLHG*RASPGG
Trigger: GCCGCCCGGAGAGGCTCTGCAGCCATGAAGCCAACC...AGAGAAAGGATATGCGTCAATGCAGACCTGAACTAAGACAGTGCCAGTGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTCAGCCCTGCGGCTCATaGCCAATGAGCCATAGCGGC +
Preference number: 4 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFQPCGS*PMSHSG
Trigger: GCCGCTATGGCTCATTGGGCATGAGCCGCAGGGCTG...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR GCA 90 bp CAGCCTTTCCCAATCTGTCCTTCAGCCTGTGCTTTGGAGAACTACCTCTCTAGACCACGTGCATCCACATaGGCTCCCAGGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QPFPICPSACALENYLSRPRAST*APRCGC
Trigger: ACAGCCACACCTGGGAGCGCATGTGGATGCACGTGG...TCTAGAGAGGTAGTTCTCCAAAGCACAGGCTGAAGGACAGATTGGGAAAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp GTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGTGCACCTTGGCCACGTaGATCCACATGCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VTVILKILSEGHSPTPVGCTLAT*IHMRSQ
Trigger: CTGGGAGCGCATGTGGATGCACGTGGCCAAGGTGCA...CCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCCACAGAAACCCTCTTaGTGGCCGGTATGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCPQKPS*WPVWLG
Trigger: GCCAAGCCATACCGGCCAGCAAGAGGGTTTCTGTGG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp ATTCCTCTCAGGCTGAAGAGCCGGGAGTCTGGTGAAAAATGGAACAGAAAGTGTGGACGGTTGGCTTCATaGCTGCAGAGCCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: IPLRLKSRESGEKWNRKCGRLAS*LQSLSG
Trigger: CCCGGAGAGGCTCTGCAGCCATGAAGCCAACCGTCC...ACACTTTCTGTTCCATTTTTCACCAGACTCCCGGCTCTTCAGCCTGAGAGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CCA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTGGACGGTTGGCTTCATaGCTGCAGAGCCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFGRLAS*LQSLSG
Trigger: CCCGGAGAGGCTCTGCAGCCATGAAGCCAACCGTCC...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp GTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGAAGGCTCGGGACGGTTaGCTTCATGGCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VTVILKILSEGHSPTPVGKARDG*LHGCRA
Trigger: GGCTCTGCAGCCATGAAGCCAACCGTCCCGAGCCTT...CCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366967.6
CDS-3UTR CCA 90 bp AAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCCGCCTGGAGCCAGTCTaGGATCGTCATCGACAGCCT +
Preference number: 4 (lower is better)
Translates to: KILSEGHSPTPVGLITSARLEPV*DRHRQP
Trigger: AGGCTGTCGATGACGATCCCAGACTGGCTCCAGGCG...GGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp AAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCCCCCGGCTTCTCACTTaGGTCGGAGAGTGGGCACTT +
Preference number: 4 (lower is better)
Translates to: KILSEGHSPTPVGLITSAPRLLT*VGEWAL
Trigger: AAGTGCCCACTCTCCGACCCAAGTGAGAAGCCGGGG...GGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp GAAGCTGTACTCTTGATATTTACACCATACAAGACTAGGCTGTTAGGGTTGTCCGGGACCGGGTGCCTTTaGCGCCTTTGGGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: EAVLLIFTPYKTRLLGLSGTGCL*RLWGGG
Trigger: GCCCCCACCCCAAAGGCGCCAAAGGCACCCGGTCCC...GGACAACCCTAACAGCCTAGTCTTGTATGGTGTAAATATCAAGAGTACAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366965.6
CDS-3UTR TCA 90 bp GCCAGAAATGTGGAGTCACTGCCTTTCTCCAATAACTCCTCCCATCTAAGCAGTAGAAGGCGGCGTTCCTaGTGGCGCCCACCATTTCTC +
Preference number: 4 (lower is better)
Translates to: ARNVESLPFSNNSSHLSSRRRRS*WRPPFL
Trigger: GAGAAATGGTGGGCGCCATCAGGAACGCCGCCTTCT...ACTGCTTAGATGGGAGGAGTTATTGGAGAAAGGCAGTGACTCCACATTTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR TCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCGGCCGTCTGCTCTCCTaGGTTGGCATTGTTGCTAAG +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCGRLLS*VGIVAK
Trigger: CTTAGCAACAATGCCAACTCAGGAGAGCAGACGGCC...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp ATAACATCTGTTGACTACCAGACTTCACTGAAATCGGCCGTCTGCTCTCCTGAGCCATCAGCTCAGCCCTaGGGCTCATGCCCAATGAGC +
Preference number: 4 (lower is better)
Translates to: ITSVDYQTSLKSAVCSPEPSAQP*GSCPMS
Trigger: GCTCATTGGGCATGAGCCGCAGGGCTGAGCTGATGG...CTCAGGAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGTCAACAGATGTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCACGTTGAGGACCAGCTaGTTCCACTCAATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCTLRTS*FHSMGW
Trigger: CCAGCCCATTGAGTGGAAGCAGCTGGTCCTCAACGT...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR GCA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCTCCGCGGAGGCTCCCTaGTTACCGGCGGTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: KTSVTVILKILSEGHSPTSAEAP*LPAVPR
Trigger: CCGAGGCACCGCCGGTAAGCAGGGAGCCTCCGCGGA...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp ATAACATCTGTTGACTACCAGACTTCACTGAAATCGGCCGTCTGCTCTCCTGAGCCACGTGCATCCACATaGGCTCCCAGGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: ITSVDYQTSLKSAVCSPEPRAST*APRCGC
Trigger: ACAGCCACACCTGGGAGCGCATGTGGATGCACGTGG...CTCAGGAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGTCAACAGATGTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp GTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCCACAGAAACCCTCTTaGTGGCCGGTATGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: VTVILKILSEGHSPTPVGPQKPS*WPVWLG
Trigger: GCCAAGCCATACCGGCCAGCAAGAGGGTTTCTGTGG...CCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR GCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCGCCGATGTTCCGAATaGGTCTATTGGCCACCGCAA +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCRRCSE*VYWPPQ
Trigger: TTGCGGTGGCCAATAGACGCATTCGGAACATCGGCG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366966.6
CDS-3UTR CCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCACTTGGGTCGGAGAGTaGGCACTTGCAGGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCTWVGE*ALAGFR
Trigger: CCTGAAACCTGCAAGTGCCCACTCTCCGACCCAAGT...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCTTGCCTGTCTCCTTCTaGGGGACAGGGATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCLPVSF*GTGIFP
Trigger: GGGGAAAATCCCTGTCCCCCAGAAGGAGACAGGCAA...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp TCACCACCAATATGTCGATGCCATCACAGTTTCTCTGCACCATATTCCTCTCAGGTGCCTCGGGACGGTTaGCTTCATGGCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SPPICRCHHSFSAPYSSQVPRDG*LHGCRA
Trigger: GGCTCTGCAGCCATGAAGCCAACCGTCCCGAGGCAC...CTGAGAGGAATATGGTGCAGAGAAACTGTGATGGCATCGACATATTGGTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CCA 90 bp CCTGAAATCCATTCCCATCCCCAGGGCCATGAGTCTAGCCTCACCATTCCCTCACACCTGTGGTCAATCTaGTTTCAGATCAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PEIHSHPQGHESSLTIPSHLWSI*FQIRAA
Trigger: TGCAGCCCTGATCTGAAACCAGATTGACCACAGGTG...TGAGGGAATGGTGAGGCTAGACTCATGGCCCTGGGGATGGGAATGGATTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR TCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCGCATCTTTGAGACGTTaGGGACCAGCTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCASLRR*GPAAST
Trigger: AGTGGAAGCAGCTGGTCCTCAACGTCTCAAAGATGC...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR TCA 90 bp CAGCCTTTCCCAATCTGTCCTTCAGCCTGTGCTTTGGAGAACTACCTCTCTAGAAGCTTGTCTACCCCATaGAGGGCCTGGGCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: QPFPICPSACALENYLSRSLSTP*RAWACV
Trigger: AACACAAGCCCAGGCCCTTCATGGGGTAGACAAGCT...TCTAGAGAGGTAGTTCTCCAAAGCACAGGCTGAAGGACAGATTGGGAAAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp TCCAAACTTGTGGAGATCCCCATGGGAAATACTGGGGAAAGAATACAAATAGAATGCTCCGGGACCGGGTaGCTTTGGCGCCAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: SKLVEIPMGNTGERIQIECSGTG*LWRQGG
Trigger: TCCCCCTTGGCGCCAAAGGCACCCGGTCCCGGAGCA...TTCTATTTGTATTCTTTCCCCAGTATTTCCCATGGGGATCTCCACAAGTTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366968.8
CDS-3UTR GCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCTGAAATCGGCCGTCTaGTCTCCTGAGTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCLKSAV*SPELAL
Trigger: CAATGCCAACTCAGGAGAGCAGACGGCCGATTTCAG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp CTGAAATCCATTCCCATCCCCAGGGCCATGAGTCTAGCCTCACCATTCCCTCATGTTTCAGATCAGGGCTaGAAGTGTTCCACAGACTGC +
Preference number: 4 (lower is better)
Translates to: LKSIPIPRAMSLASPFPHVSDQG*KCSTDC
Trigger: GCAGTCTGTGGAACACTTGCAGCCCTGATCTGAAAC...ATGAGGGAATGGTGAGGCTAGACTCATGGCCCTGGGGATGGGAATGGATTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCTGGGGAACCGCTCAATaGAAGGCTGCCCATTGGTTA +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCWGTAQ*KAAHWL
Trigger: TAACCAATGGGCAGCCTTCCATTGAGCGGTTCCCCA...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCGCTGCTTCCACTCAATaGGCTGGAAGCTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCAASTQ*AGSYEA
Trigger: AGCCTCATAGCTTCCAGCCCATTGAGTGGAAGCAGC...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp GTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGACTTGGGTCGGAGAGTaGGCACTTGCAGGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: VTVILKILSEGHSPTPVGTWVGE*ALAGFR
Trigger: CCTGAAACCTGCAAGTGCCCACTCTCCGACCCAAGT...CCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp AAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCACTTGGGTCGGAGAGTaGGCACTTGCAGGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: KILSEGHSPTPVGLITSATWVGE*ALAGFR
Trigger: CCTGAAACCTGCAAGTGCCCACTCTCCGACCCAAGT...GGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp ACCTTCACTGGCACTGTCTTAGTTCAGGTCTGCATTGACGCATATCCTTTCTCTCCGCTCTTGTTGACGTaGAACAGCACCCCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: TFTGTVLVQVCIDAYPFSPLLLT*NSTPPS
Trigger: AGACGGCGGGGTGCTGTTCCACGTCAACAAGAGCGG...AGAGAAAGGATATGCGTCAATGCAGACCTGAACTAAGACAGTGCCAGTGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR TCA 90 bp AAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCGCATCTTTGAGACGTTaGGGACCAGCTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: KILSEGHSPTPVGLITSAASLRR*GPAAST
Trigger: AGTGGAAGCAGCTGGTCCTCAACGTCTCAAAGATGC...GGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR TCA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCTTTGTCCTCCTCCTCTaGGCCCCCGCTGGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: KTSVTVILKILSEGHSPTFVLLL*APAGGE
Trigger: CTCGCCACCAGCGGGGGCTCAGAGGAGGAGGACAAA...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp AAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCACTACCAGACTTCACTaGAATCGGCCGTCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: KILSEGHSPTPVGLITSATTRLH*NRPSAL
Trigger: GAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGT...GGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp TTCCCCTTCGTTGATCTCTTCCACCAGCAAATCCCCAGCCAATCATCTGCCCCCCTTAAAACCATTCCCTaGAATCCATTCCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: FPFVDLFHQQIPSQSSAPLKTIP*NPFPSP
Trigger: TGGGGATGGGAATGGATTTCAGGGAATGGTTTTAAG...GGGGGCAGATGATTGGCTGGGGATTTGCTGGTGGAAGAGATCAACGAAGGGGAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR TCA 90 bp CTGAAATCCATTCCCATCCCCAGGGCCATGAGTCTAGCCTCACCATTCCCTCATTGTGTTCCCCTTCGTTaGTCTCTTCCACCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LKSIPIPRAMSLASPFPHCVPLR*SLPPAN
Trigger: ATTTGCTGGTGGAAGAGATCAACGAAGGGGAACACA...ATGAGGGAATGGTGAGGCTAGACTCATGGCCCTGGGGATGGGAATGGATTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR TCA 90 bp CGCATTTCCAGTGCAGATTCCCCTGTGAGCTCCACATTGCAAATACCTCATTCCCTGAGTTCAGCAGCGTaGACTGAAGCTCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: RISSADSPVSSTLQIPHSLSSAA*TEALHL
Trigger: AAGGTGGAGAGCTTCAGTTCACGCTGCTGAACTCAG...GGAATGAGGTATTTGCAATGTGGAGCTCACAGGGGAATCTGCACTGGAAATGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCAGCCATAGCGGCCATTaGAGTAAATCCCCAGCACAA +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCSHSGH*SKSPAQ
Trigger: TTGTGCTGGGGATTTACTGCAATGGCCGCTATGGCT...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR GCA 90 bp AGCCAGAGGAGATGCACTGAGACTGAAATAACATCTGTTGACTACCAGACTTCACCATCAGCTCAGCCCTaGGGCTCATGCCCAATGAGC +
Preference number: 4 (lower is better)
Translates to: SQRRCTETEITSVDYQTSPSAQP*GSCPMS
Trigger: GCTCATTGGGCATGAGCCGCAGGGCTGAGCTGATGG...TGAAGTCTGGTAGTCAACAGATGTTATTTCAGTCTCAGTGCATCTCCTCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTACGTTGAGGACCAGCTaGTTCCACTCAATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFTLRTS*FHSMGW
Trigger: CCAGCCCATTGAGTGGAAGCAGCTGGTCCTCAACGT...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR GCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCGCTTTGAAGTCCTTTTaGTTTCCCTGTCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCALKSF*FPCHPQ
Trigger: CTGGGGGTGACAGGGAAAGCAAAAGGACTTCAAAGC...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp GTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGATGTGGCCAAGAGGCTaGGAATGGGTTTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: VTVILKILSEGHSPTPVGMWPRG*EWVCCV
Trigger: CACACAGCAAACCCATTCGCAGCCTCTTGGCCACAT...CCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp TCCAAACTTGTGGAGATCCCCATGGGAAATACTGGGGAAAGAATACAAATAGAATGCTCCGGGACCGGGTaGCTTTGGCGCCTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: SKLVEIPMGNTGERIQIECSGTG*LWRLWG
Trigger: ACCCCAAAGGCGCCAAAGGCACCCGGTCCCGGAGCA...TTCTATTTGTATTCTTTCCCCAGTATTTCCCATGGGGATCTCCACAAGTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366965.6
CDS-3UTR CCA 90 bp GGGAAACAAGCTATGCAACCATTTGACATTCTGTATTTTAGATGTAACAGTACTGGGACCGGGTGCCTTTaGCGCCAAGGGGGAGCGGCG +
Preference number: 4 (lower is better)
Translates to: GKQAMQPFDILYFRCNSTGTGCL*RQGGAA
Trigger: CGCCGCTCCCCCTTGGCGCCAAAGGCACCCGGTCCC...AGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366968.8
CDS-3UTR CCA 90 bp GTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCCTGCTGATCACTCCTaGTCTCTGCCTGAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: VTVILKILSEGHSPTPVGPADHS*SLPECV
Trigger: AACACACTCAGGCAGAGACCAGGAGTGATCAGCAGG...CCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp CTGAAATCCATTCCCATCCCCAGGGCCATGAGTCTAGCCTCACCATTCCCTCATCTTCAGCCTGTGCTTTaGAGAACTACCTCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: LKSIPIPRAMSLASPFPHLQPVL*RTTSLE
Trigger: CTCTAGAGAGGTAGTTCTCCAAAGCACAGGCTGAAG...ATGAGGGAATGGTGAGGCTAGACTCATGGCCCTGGGGATGGGAATGGATTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CCA 90 bp TCATTCCTCCAGCTAATCCCGCAGTCGATTGCCCAATTCAGAAACCTGGAGACGCAGCCAAGGCACCTGTaGTCAATCTGGTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: SFLQLIPQSIAQFRNLETQPRHL*SIWFQI
Trigger: GATCTGAAACCAGATTGACCACAGGTGCCTTGGCTG...CGTCTCCAGGTTTCTGAATTGGGCAATCGACTGCGGGATTAGCTGGAGGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
3UTR CAA 72 bp CTGATCTTGCCTGGGACCATCTCTCAAGCTCCTGTCTaGCAGTGTTTCCTTTTCCACTGTCCCTTACAGCCA +
Preference number: 4 (lower is better)
Translates to: LILPGTISQAPV*QCFLFHCPLQP
Trigger: TGGCTGTAAGGGACAGTGGAAAAGGAAACACTGCAAGACAGGAGCTTGAGAGATGGTCCCAGGCAAGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR TCA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCTGGGACCTGGGGTATTaGAGGCTCGGGACGGTTGGC +
Preference number: 4 (lower is better)
Translates to: KTSVTVILKILSEGHSPTWDLGY*RLGTVG
Trigger: GCCAACCGTCCCGAGCCTTCAATACCCCAGGTCCCA...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366967.6
CDS-3UTR TCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCCTCAAAGTCAAAGATaGGGTCACTCAGAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCPQSQR*GHSESE
Trigger: TTCGGACTCTGAGTGACCTCATCTTTGACTTTGAGG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR TCA 90 bp CGCATTTCCAGTGCAGATTCCCCTGTGAGCTCCACATTGCAAATACCTCATTCCATCCGATCCTCTCCTTaGAGTTCTTCCCTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: RISSADSPVSSTLQIPHSIRSSP*SSSLVA
Trigger: TGCCACAAGGGAAGAACTTCAAGGAGAGGATCGGAT...GGAATGAGGTATTTGCAATGTGGAGCTCACAGGGGAATCTGCACTGGAAATGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR TCA 90 bp CAAGCCAGAAATGTGGAGTCACTGCCTTTCTCCAATAACTCCTCCCATCTAAGCCACATGTCCTTCCACTaGCCTCTCCATCCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: QARNVESLPFSNNSSHLSHMSFH*PLHPLS
Trigger: AGAAAGGGGATGGAGAGGTCAGTGGAAGGACATGTG...GCTTAGATGGGAGGAGTTATTGGAGAAAGGCAGTGACTCCACATTTCTGGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp AAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCAGCCATAGCGGCCATTaGAGTAAATCCCCAGCACAA +
Preference number: 4 (lower is better)
Translates to: KILSEGHSPTPVGLITSASHSGH*SKSPAQ
Trigger: TTGTGCTGGGGATTTACTGCAATGGCCGCTATGGCT...GGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR GCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCCACTTCATTCAGAGTaGTCAGATCAGCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCPLHSE*SDQPPS
Trigger: AGAAGGTGGCTGATCTGAGCACTCTGAATGAAGTGG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR GCA 90 bp AAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTGTCCTGTGTGGTCTaGAGCCAGAGGTTACACTGT +
Preference number: 4 (lower is better)
Translates to: KILSEGHSPTPVGLITSALSCVV*SQRLHC
Trigger: ACAGTGTAACCTCTGGCTGCAGACCACACAGGACAA...GGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp GGAGACCCAGAAAACAGACTAGACCAATCCTCCTGTCCCCAGTCTAATTCTGAGTTCCTCATTAACTCCTaGGTCTGGTTGGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GDPENRLDQSSCPQSNSEFLINS*VWLACK
Trigger: CTTGCAGGCCAACCAGACGCAGGAGTTAATGAGGAA...CTCAGAATTAGACTGGGGACAGGAGGATTGGTCTAGTCTGTTTTCTGGGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp CTTCAGCCTGTGCTTTGGAGAACTACCTCTCTAGAGCATATACCTAAGCATGCCGGTGGTGATGATGTATaGCTCCATCCCTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LQPVLWRTTSLEHIPKHAGGDDV*LHPFPP
Trigger: TGGAGGGAAGGGATGGAGGCATACATCATCACCACC...GGCATGCTTAGGTATATGCTCTAGAGAGGTAGTTCTCCAAAGCACAGGCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CCA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCGGACGGTTGGCTTCATaGCTGCAGAGCCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: KTSVTVILKILSEGHSPTGRLAS*LQSLSG
Trigger: CCCGGAGAGGCTCTGCAGCCATGAAGCCAACCGTCC...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp GTCTGCAGCCAGAGGTTACACTGTAACTACCATATGCAGGCCAGACATTCATTCTGGGGAACCGCTCAATaGAAGGCTGCCCATTGGTTA +
Preference number: 4 (lower is better)
Translates to: VCSQRLHCNYHMQARHSFWGTAQ*KAAHWL
Trigger: TAACCAATGGGCAGCCTTCCATTGAGCGGTTCCCCA...GAATGAATGTCTGGCCTGCATATGGTAGTTACAGTGTAACCTCTGGCTGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCAGTCCGAAAAGTCAATaGCTTGTCCATCAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCSPKSQ*LVHQLS
Trigger: GCTGAGCTGATGGACAAGCCATTGACTTTTCGGACT...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp CAGCCTTTCCCAATCTGTCCTTCAGCCTGTGCTTTGGAGAACTACCTCTCTAGATCCCTCCACCTTCACTaGCACTGTCTTAGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: QPFPICPSACALENYLSRSLHLH*HCLSSG
Trigger: ACCTGAACTAAGACAGTGCCAGTGAAGGTGGAGGGA...TCTAGAGAGGTAGTTCTCCAAAGCACAGGCTGAAGGACAGATTGGGAAAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CCA 90 bp GGAGACCCAGAAAACAGACTAGACCAATCCTCCTGTCCCCAGTCTAATTCTGAGTTCGCTGAACAGCTGTaGCTGACTCCTGCCACTAAA +
Preference number: 4 (lower is better)
Translates to: GDPENRLDQSSCPQSNSEFAEQL*LTPATK
Trigger: TTTAGTGGCAGGAGTCAGCCACAGCTGTTCAGCGAA...CTCAGAATTAGACTGGGGACAGGAGGATTGGTCTAGTCTGTTTTCTGGGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR TCA 90 bp AAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCCCTCAAAGTCAAAGATaGGGTCACTCAGAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: KILSEGHSPTPVGLITSAPQSQR*GHSESE
Trigger: TTCGGACTCTGAGTGACCTCATCTTTGACTTTGAGG...GGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR TCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCAACTGGGTCCCTGTGTaGTTATATTGTAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCNWVPV*LYCRVF
Trigger: GAAGACCCTACAATATAATCACACAGGGACCCAGTT...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR TCA 90 bp AGCCAGAGGAGATGCACTGAGACTGAAATAACATCTGTTGACTACCAGACTTCAGTTCTGAAGACCTGCTaGTCACTCCTGGTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SQRRCTETEITSVDYQTSVLKTC*SLLVSA
Trigger: GGCAGAGACCAGGAGTGATCAGCAGGTCTTCAGAAC...TGAAGTCTGGTAGTCAACAGATGTTATTTCAGTCTCAGTGCATCTCCTCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp TGTGGCATTATCATGCAAGCCAGAAATGTGGAGTCACTGCCTTTCTCCAATAACATATTCCTCTCAGGCTaGAGAGCCGGGAGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: CGIIMQARNVESLPFSNNIFLSG*RAGSLV
Trigger: CACCAGACTCCCGGCTCTTCAGCCTGAGAGGAATAT...GTTATTGGAGAAAGGCAGTGACTCCACATTTCTGGCTTGCATGATAATGCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp GGACTGAATTACACTATAAGGTGTAACACTGGACCGAAGACTTTTCCATTAAAAGGTTGGCTTCATGGCTaGAGAGCCTCTCCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GLNYTIRCNTGPKTFPLKGWLHG*RASPGG
Trigger: GCCGCCCGGAGAGGCTCTGCAGCCATGAAGCCAACC...TTTTAATGGAAAAGTCTTCGGTCCAGTGTTACACCTTATAGTGTAATTCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp AGCCAGAGGAGATGCACTGAGACTGAAATAACATCTGTTGACTACCAGACTTCAACGTTGAGGACCAGCTaGTTCCACTCAATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SQRRCTETEITSVDYQTSTLRTS*FHSMGW
Trigger: CCAGCCCATTGAGTGGAAGCAGCTGGTCCTCAACGT...TGAAGTCTGGTAGTCAACAGATGTTATTTCAGTCTCAGTGCATCTCCTCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp GGACTGAATTACACTATAAGGTGTAACACTGGACCGAAGACTTTTCCATTAAAACCTGCTTACCGGCGGTaGCTCGGGACGGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GLNYTIRCNTGPKTFPLKPAYRR*LGTVGF
Trigger: GAAGCCAACCGTCCCGAGGCACCGCCGGTAAGCAGG...TTTTAATGGAAAAGTCTTCGGTCCAGTGTTACACCTTATAGTGTAATTCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp AAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCCCACTTCATTCAGAGTaGTCAGATCAGCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: KILSEGHSPTPVGLITSAPLHSE*SDQPPS
Trigger: AGAAGGTGGCTGATCTGAGCACTCTGAATGAAGTGG...GGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR GCA 90 bp ATATACCTAAGCATGCCACACCTCTGCTTCAGAGCTTTCATCTGGGTTGCCCATCTGTCCTTCAGCCTGTaGTTTGGAGAACTACCTCTC +
Preference number: 4 (lower is better)
Translates to: IYLSMPHLCFRAFIWVAHLSFSL*FGELPL
Trigger: GAGAGGTAGTTCTCCAAAGCACAGGCTGAAGGACAG...ATGGGCAACCCAGATGAAAGCTCTGAAGCAGAGGTGTGGCATGCTTAGGTATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp CTGAAATCCATTCCCATCCCCAGGGCCATGAGTCTAGCCTCACCATTCCCTCATGAAATGTGGAGTCACTaGCTTTCTCCAATAACTCCT +
Preference number: 4 (lower is better)
Translates to: LKSIPIPRAMSLASPFPHEMWSH*LSPITP
Trigger: AGGAGTTATTGGAGAAAGGCAGTGACTCCACATTTC...ATGAGGGAATGGTGAGGCTAGACTCATGGCCCTGGGGATGGGAATGGATTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CCA 90 bp GTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGAGTCCGAAAAGTCAATaGCTTGTCCATCAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VTVILKILSEGHSPTPVGSPKSQ*LVHQLS
Trigger: GCTGAGCTGATGGACAAGCCATTGACTTTTCGGACT...CCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCTGGCCGGTATGGCTTaGCTAAATTCGGATTTGATA +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCLAGMA*LNSDLI
Trigger: TATCAAATCCGAATTTAGCCAAGCCATACCGGCCAG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp GGACTGAATTACACTATAAGGTGTAACACTGGACCGAAGACTTTTCCATTAAAATGCCTTTGGCGCCTTTaGGGTGGGGGCAGCGGTGAG +
Preference number: 4 (lower is better)
Translates to: GLNYTIRCNTGPKTFPLKCLWRL*GGGSGE
Trigger: CTCACCGCTGCCCCCACCCCAAAGGCGCCAAAGGCA...TTTTAATGGAAAAGTCTTCGGTCCAGTGTTACACCTTATAGTGTAATTCAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366965.6
CDS-3UTR TCA 90 bp ATAACATCTGTTGACTACCAGACTTCACTGAAATCGGCCGTCTGCTCTCCTGAGCCTCAAAGTCAAAGATaGGGTCACTCAGAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: ITSVDYQTSLKSAVCSPEPQSQR*GHSESE
Trigger: TTCGGACTCTGAGTGACCTCATCTTTGACTTTGAGG...CTCAGGAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGTCAACAGATGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCATGGGCTGGAAGCTATaGGGCTCATGGGGGACGTAC +
Preference number: 4 (lower is better)
Translates to: KTSVTVILKILSEGHSPTMGWKL*GSWGTY
Trigger: GTACGTCCCCCATGAGCCTCATAGCTTCCAGCCCAT...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR TCA 90 bp GGGAAACAAGCTATGCAACCATTTGACATTCTGTATTTTAGATGTAACAGTACTTTTGTCCTCCTCCTCTaGGCCCCCGCTGGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: GKQAMQPFDILYFRCNSTFVLLL*APAGGE
Trigger: CTCGCCACCAGCGGGGGCTCAGAGGAGGAGGACAAA...AGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp GTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGAACTGGGTCCCTGTGTaGTTATATTGTAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: VTVILKILSEGHSPTPVGNWVPV*LYCRVF
Trigger: GAAGACCCTACAATATAATCACACAGGGACCCAGTT...CCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366967.6
ENST00000366968.8
CDS-3UTR TCA 90 bp CAGCAGCGTGAACTGAAGCTCTCCACCTTCCTGCACTTTTCTGAAATGTCAGAACTTTGCTCTTCTATCTaGTTGTGGCAGATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QQRELKLSTFLHFSEMSELCSSI*LWQIRL
Trigger: GAGCCTGATCTGCCACAATCAGATAGAAGAGCAAAG...TTCTGACATTTCAGAAAAGTGCAGGAAGGTGGAGAGCTTCAGTTCACGCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR TCA 90 bp GCCAGAAATGTGGAGTCACTGCCTTTCTCCAATAACTCCTCCCATCTAAGCAGTAGTTCAGGTCTGCATTaGCGCATATCCTTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: ARNVESLPFSNNSSHLSSSSGLH*RISFLC
Trigger: GCAGAGAAAGGATATGCGTCAATGCAGACCTGAACT...ACTGCTTAGATGGGAGGAGTTATTGGAGAAAGGCAGTGACTCCACATTTCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTCCACTTCATTCAGAGTaGTCAGATCAGCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFPLHSE*SDQPPS
Trigger: AGAAGGTGGCTGATCTGAGCACTCTGAATGAAGTGG...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR GCA 90 bp GGAGACCCAGAAAACAGACTAGACCAATCCTCCTGTCCCCAGTCTAATTCTGAGTGCGTCTGGTTGGCCTaGAAGTCCTATACATTCTAT +
Preference number: 4 (lower is better)
Translates to: GDPENRLDQSSCPQSNSECVWLA*KSYTFY
Trigger: ATAGAATGTATAGGACTTGCAGGCCAACCAGACGCA...CTCAGAATTAGACTGGGGACAGGAGGATTGGTCTAGTCTGTTTTCTGGGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp GAACAAAGGAAAACCACGAGCACACTGTCTCTGATTTGGACAGGCTCAAAGGCTAATTCGCATTTCCAGTaGAGATTCCCCTGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: EQRKTTSTLSLIWTGSKANSHFQ*RFPCEL
Trigger: GAGCTCACAGGGGAATCTGCACTGGAAATGCGAATT...AGCCTTTGAGCCTGTCCAAATCAGAGACAGTGTGCTCGTGGTTTTCCTTTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp TCATTCCTCCAGCTAATCCCGCAGTCGATTGCCCAATTCAGAAACCTGGAGACGTGTTTCCTGTCTGTGTaGAAGAGTCAAATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SFLQLIPQSIAQFRNLETCFLSV*KSQISL
Trigger: CAGGGAAATTTGACTCTTGCACACAGACAGGAAACA...CGTCTCCAGGTTTCTGAATTGGGCAATCGACTGCGGGATTAGCTGGAGGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CCA 90 bp ATCAAGCCAGTTGGCAGTTCTAAGGCTTCTTTATCAGCATATTACAGAGTTTGTCGCCTGGAGCCAGTCTaGGATCGTCATCGACAGCCT +
Preference number: 4 (lower is better)
Translates to: IKPVGSSKASLSAYYRVCRLEPV*DRHRQP
Trigger: AGGCTGTCGATGACGATCCCAGACTGGCTCCAGGCG...ACAAACTCTGTAATATGCTGATAAAGAAGCCTTAGAACTGCCAACTGGCTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTAGTCCGAAAAGTCAATaGCTTGTCCATCAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFSPKSQ*LVHQLS
Trigger: GCTGAGCTGATGGACAAGCCATTGACTTTTCGGACT...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCTTTTCCTCCTTGTTGTaGGAAACAAGCTATGCAACC +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCFSSLL*ETSYAT
Trigger: GGTTGCATAGCTTGTTTCCCACAACAAGGAGGAAAA...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp CAGCAGCGTGAACTGAAGCTCTCCACCTTCCTGCACTTTTCTGAAATGTCAGAAGTTTCATCTCCTTTGTaGGAAACAGGGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: QQRELKLSTFLHFSEMSEVSSPL*ETGRRM
Trigger: CATCCTCCTCCCTGTTTCCCACAAAGGAGATGAAAC...TTCTGACATTTCAGAAAAGTGCAGGAAGGTGGAGAGCTTCAGTTCACGCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CCA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTTGGAAGGCTGCCCATTaGTTAAGTAGTGTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFWKAAH*LSSVGS
Trigger: AGACCCTACACTACTTAACCAATGGGCAGCCTTCCA...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366965.6
CDS-3UTR TCA 90 bp GGACTGAATTACACTATAAGGTGTAACACTGGACCGAAGACTTTTCCATTAAAAAGAAGGCGGCGTTCCTaGTGGCGCCCACCATTTCTC +
Preference number: 4 (lower is better)
Translates to: GLNYTIRCNTGPKTFPLKRRRRS*WRPPFL
Trigger: GAGAAATGGTGGGCGCCATCAGGAACGCCGCCTTCT...TTTTAATGGAAAAGTCTTCGGTCCAGTGTTACACCTTATAGTGTAATTCAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCTTATCCTTAAGATCTTaGGTGAGGGACATAGTCCAA +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCLSLRS*VRDIVQ
Trigger: TTGGACTATGTCCCTCACTCAAGATCTTAAGGATAA...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR TCA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCGGCCGTCTGCTCTCCTaGGTTGGCATTGTTGCTAAG +
Preference number: 4 (lower is better)
Translates to: KTSVTVILKILSEGHSPTGRLLS*VGIVAK
Trigger: CTTAGCAACAATGCCAACTCAGGAGAGCAGACGGCC...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp TCGCATTTCCAGTGCAGATTCCCCTGTGAGCTCCACATTGCAAATACCTCATTCAGGTGGTCATTTCAATaGCCTAAATCCAGAGGCACT +
Preference number: 4 (lower is better)
Translates to: SHFQCRFPCELHIANTSFRWSFQ*PKSRGT
Trigger: AGTGCCTCTGGATTTAGGTCATTGAAATGACCACCT...GAATGAGGTATTTGCAATGTGGAGCTCACAGGGGAATCTGCACTGGAAATGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCACGTTGAGGACCAGCTaGTTCCACTCAATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KTSVTVILKILSEGHSPTTLRTS*FHSMGW
Trigger: CCAGCCCATTGAGTGGAAGCAGCTGGTCCTCAACGT...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR GCA 90 bp ATAACATCTGTTGACTACCAGACTTCACTGAAATCGGCCGTCTGCTCTCCTGAGATCACTCCTGGTCTCTaGCTGAGTGTGTTAATGTCA +
Preference number: 4 (lower is better)
Translates to: ITSVDYQTSLKSAVCSPEITPGL*LSVLMS
Trigger: TGACATTAACACACTCAGGCAGAGACCAGGAGTGAT...CTCAGGAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGTCAACAGATGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCACTGTAACTACCATATaGAGGCCAGACATTCATTCT +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCTVTTI*RPDIHS
Trigger: AGAATGAATGTCTGGCCTGCATATGGTAGTTACAGT...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp TGGTTACCACCCACTCAGATTCTATTTCCAGGTGAATCCTTAAAAATAAAATTCCTCCATGCCTCTCGCTaGGGCAGGACTCACCAAGGG +
Preference number: 4 (lower is better)
Translates to: WLPPTQILFPGESLKIKFLHASR*GRTHQG
Trigger: CCCTTGGTGAGTCCTGCCGCAGCGAGAGGCATGGAG...GAATTTTATTTTTAAGGATTCACCTGGAAATAGAATCTGAGTGGGTGGTAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366965.6
CDS-3UTR CCA 90 bp GGGAAACAAGCTATGCAACCATTTGACATTCTGTATTTTAGATGTAACAGTACTGGACGGTTGGCTTCATaGCTGCAGAGCCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GKQAMQPFDILYFRCNSTGRLAS*LQSLSG
Trigger: CCCGGAGAGGCTCTGCAGCCATGAAGCCAACCGTCC...AGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp TATAAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCACGCCTGGAGCCAGTCTaGGATCGTCATCGACAGCCT +
Preference number: 4 (lower is better)
Translates to: YKTSVTVILKILSEGHSPRLEPV*DRHRQP
Trigger: AGGCTGTCGATGACGATCCCAGACTGGCTCCAGGCG...TGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCTTGCCTGTCTCCTTCTaGGGGACAGGGATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: KTSVTVILKILSEGHSPTLPVSF*GTGIFP
Trigger: GGGGAAAATCCCTGTCCCCCAGAAGGAGACAGGCAA...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp GGGAAACAAGCTATGCAACCATTTGACATTCTGTATTTTAGATGTAACAGTACTGTGCCTCGGGACGGTTaGCTTCATGGCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GKQAMQPFDILYFRCNSTVPRDG*LHGCRA
Trigger: GGCTCTGCAGCCATGAAGCCAACCGTCCCGAGGCAC...AGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp GGACTGAATTACACTATAAGGTGTAACACTGGACCGAAGACTTTTCCATTAAAACCGCTCTTGTTGACGTaGAACAGCACCCCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GLNYTIRCNTGPKTFPLKPLLLT*NSTPPS
Trigger: AGACGGCGGGGTGCTGTTCCACGTCAACAAGAGCGG...TTTTAATGGAAAAGTCTTCGGTCCAGTGTTACACCTTATAGTGTAATTCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp ATAACATCTGTTGACTACCAGACTTCACTGAAATCGGCCGTCTGCTCTCCTGAGCTGGCCGGTATGGCTTaGCTAAATTCGGATTTGATA +
Preference number: 4 (lower is better)
Translates to: ITSVDYQTSLKSAVCSPELAGMA*LNSDLI
Trigger: TATCAAATCCGAATTTAGCCAAGCCATACCGGCCAG...CTCAGGAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGTCAACAGATGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp GCCAGAAATGTGGAGTCACTGCCTTTCTCCAATAACTCCTCCCATCTAAGCAGTGAAGTTCTTCCCTTGTaGCATTATCATGCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: ARNVESLPFSNNSSHLSSEVLPL*HYHASQ
Trigger: CTGGCTTGCATGATAATGCCACAAGGGAAGAACTTC...ACTGCTTAGATGGGAGGAGTTATTGGAGAAAGGCAGTGACTCCACATTTCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CCA 90 bp CAGCAGCGTGAACTGAAGCTCTCCACCTTCCTGCACTTTTCTGAAATGTCAGAAACACTGTCTCTGATTTaGACAGGCTCAAAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: QQRELKLSTFLHFSEMSETLSLI*TGSKAV
Trigger: AACAGCCTTTGAGCCTGTCCAAATCAGAGACAGTGT...TTCTGACATTTCAGAAAAGTGCAGGAAGGTGGAGAGCTTCAGTTCACGCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR TCA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCGTGAAAGTAGTTTCCTaGGAAGTAGGTTTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCVKVVS*EVGFKA
Trigger: AGCTTTAAAACCTACTTCTCAGGAAACTACTTTCAC...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR TCA 90 bp TATAAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAATGGGCTGGAAGCTATaGGGCTCATGGGGGACGTAC +
Preference number: 4 (lower is better)
Translates to: YKTSVTVILKILSEGHSPMGWKL*GSWGTY
Trigger: GTACGTCCCCCATGAGCCTCATAGCTTCCAGCCCAT...TGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR TCA 90 bp GGGAAACAAGCTATGCAACCATTTGACATTCTGTATTTTAGATGTAACAGTACTAGAAGGCGGCGTTCCTaGTGGCGCCCACCATTTCTC +
Preference number: 4 (lower is better)
Translates to: GKQAMQPFDILYFRCNSTRRRRS*WRPPFL
Trigger: GAGAAATGGTGGGCGCCATCAGGAACGCCGCCTTCT...AGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp TCACCACCAATATGTCGATGCCATCACAGTTTCTCTGCACCATATTCCTCTCAGAACTGGGTCCCTGTGTaGTTATATTGTAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SPPICRCHHSFSAPYSSQNWVPV*LYCRVF
Trigger: GAAGACCCTACAATATAATCACACAGGGACCCAGTT...CTGAGAGGAATATGGTGCAGAGAAACTGTGATGGCATCGACATATTGGTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp GGGAAACAAGCTATGCAACCATTTGACATTCTGTATTTTAGATGTAACAGTACTCCACGTGCATCCACATaGGCTCCCAGGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GKQAMQPFDILYFRCNSTPRAST*APRCGC
Trigger: ACAGCCACACCTGGGAGCGCATGTGGATGCACGTGG...AGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp TGGTTACCACCCACTCAGATTCTATTTCCAGGTGAATCCTTAAAAATAAAATTCTGCACCTTGGCCACGTaGATCCACATGCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: WLPPTQILFPGESLKIKFCTLAT*IHMRSQ
Trigger: CTGGGAGCGCATGTGGATGCACGTGGCCAAGGTGCA...GAATTTTATTTTTAAGGATTCACCTGGAAATAGAATCTGAGTGGGTGGTAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp CAGCAGCGTGAACTGAAGCTCTCCACCTTCCTGCACTTTTCTGAAATGTCAGAAAGCTTTCATCTGGGTTaGCCATTGCCTTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: QQRELKLSTFLHFSEMSESFHLG*PLPFGK
Trigger: TTTTCCAAAAGGCAATGGGCAACCCAGATGAAAGCT...TTCTGACATTTCAGAAAAGTGCAGGAAGGTGGAGAGCTTCAGTTCACGCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CCA 90 bp TGGTTACCACCCACTCAGATTCTATTTCCAGGTGAATCCTTAAAAATAAAATTCCCCCGGCTTCTCACTTaGGTCGGAGAGTGGGCACTT +
Preference number: 4 (lower is better)
Translates to: WLPPTQILFPGESLKIKFPRLLT*VGEWAL
Trigger: AAGTGCCCACTCTCCGACCCAAGTGAGAAGCCGGGG...GAATTTTATTTTTAAGGATTCACCTGGAAATAGAATCTGAGTGGGTGGTAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp GGGAAACAAGCTATGCAACCATTTGACATTCTGTATTTTAGATGTAACAGTACTCCGCTCTTGTTGACGTaGAACAGCACCCCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GKQAMQPFDILYFRCNSTPLLLT*NSTPPS
Trigger: AGACGGCGGGGTGCTGTTCCACGTCAACAAGAGCGG...AGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp GTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCCCCATGGGAAATACTaGGGAAAGAATACAAATAGA +
Preference number: 4 (lower is better)
Translates to: VTVILKILSEGHSPTPVGPHGKY*GKNTNR
Trigger: TCTATTTGTATTCTTTCCCCAGTATTTCCCATGGGG...CCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTTTTTCCTCCTTGTTGTaGGAAACAAGCTATGCAACC +
Preference number: 4 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFFSSLL*ETSYAT
Trigger: GGTTGCATAGCTTGTTTCCCACAACAAGGAGGAAAA...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR CAA 72 bp TTGATATTTACACCATACAAGACTAGGCTGTTAGGGTaGTCCTGTGTGGTCTGCAGCCAGAGGTTACACTGT +
Preference number: 4 (lower is better)
Translates to: LIFTPYKTRLLG*SCVVCSQRLHC
Trigger: ACAGTGTAACCTCTGGCTGCAGACCACACAGGACAACCCTAACAGCCTAGTCTTGTATGGTGTAAATATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp GTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGGTGAAAGTAGTTTCCTaGGAAGTAGGTTTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: VTVILKILSEGHSPTPVGVKVVS*EVGFKA
Trigger: AGCTTTAAAACCTACTTCTCAGGAAACTACTTTCAC...CCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR TCA 90 bp TGGTTACCACCCACTCAGATTCTATTTCCAGGTGAATCCTTAAAAATAAAATTCATGGGCTGGAAGCTATaGGGCTCATGGGGGACGTAC +
Preference number: 4 (lower is better)
Translates to: WLPPTQILFPGESLKIKFMGWKL*GSWGTY
Trigger: GTACGTCCCCCATGAGCCTCATAGCTTCCAGCCCAT...GAATTTTATTTTTAAGGATTCACCTGGAAATAGAATCTGAGTGGGTGGTAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR TCA 90 bp GTCTGCAGCCAGAGGTTACACTGTAACTACCATATGCAGGCCAGACATTCATTCACTTTCAAGTTTGTGTaGCTAAACCTTGCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: VCSQRLHCNYHMQARHSFTFKFV*LNLALG
Trigger: TCCCAAAGCAAGGTTTAGTCACACAAACTTGAAAGT...GAATGAATGTCTGGCCTGCATATGGTAGTTACAGTGTAACCTCTGGCTGCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp GGGAAACAAGCTATGCAACCATTTGACATTCTGTATTTTAGATGTAACAGTACTCCACAGAAACCCTCTTaGTGGCCGGTATGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GKQAMQPFDILYFRCNSTPQKPS*WPVWLG
Trigger: GCCAAGCCATACCGGCCAGCAAGAGGGTTTCTGTGG...AGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp GTCTGCAGCCAGAGGTTACACTGTAACTACCATATGCAGGCCAGACATTCATTCCAGACATTCATTCTGTaGTTAGGGACTGAATTACAC +
Preference number: 4 (lower is better)
Translates to: VCSQRLHCNYHMQARHSFQTFIL*LGTELH
Trigger: GTGTAATTCAGTCCCTAAGCACAGAATGAATGTCTG...GAATGAATGTCTGGCCTGCATATGGTAGTTACAGTGTAACCTCTGGCTGCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp ATCAAGCCAGTTGGCAGTTCTAAGGCTTCTTTATCAGCATATTACAGAGTTTGTCTGAAATCGGCCGTCTaGTCTCCTGAGTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: IKPVGSSKASLSAYYRVCLKSAV*SPELAL
Trigger: CAATGCCAACTCAGGAGAGCAGACGGCCGATTTCAG...ACAAACTCTGTAATATGCTGATAAAGAAGCCTTAGAACTGCCAACTGGCTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp GTCTGCAGCCAGAGGTTACACTGTAACTACCATATGCAGGCCAGACATTCATTCGTGGGAAACAAGCTATaGAACCATTTGACATTCTGT +
Preference number: 4 (lower is better)
Translates to: VCSQRLHCNYHMQARHSFVGNKL*NHLTFC
Trigger: ACAGAATGTCAAATGGTTGCATAGCTTGTTTCCCAC...GAATGAATGTCTGGCCTGCATATGGTAGTTACAGTGTAACCTCTGGCTGCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp TGTGGCATTATCATGCAAGCCAGAAATGTGGAGTCACTGCCTTTCTCCAATAACCTCAAGCTCCTGTCTTaGAGTGTTTCCTTTTCCACT +
Preference number: 4 (lower is better)
Translates to: CGIIMQARNVESLPFSNNLKLLS*SVSFST
Trigger: AGTGGAAAAGGAAACACTGCAAGACAGGAGCTTGAG...GTTATTGGAGAAAGGCAGTGACTCCACATTTCTGGCTTGCATGATAATGCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp TGTGGCATTATCATGCAAGCCAGAAATGTGGAGTCACTGCCTTTCTCCAATAACAGCTCTCCACCTTCCTaGACTTTTCTGAAATGTCAG +
Preference number: 4 (lower is better)
Translates to: CGIIMQARNVESLPFSNNSSPPS*TFLKCQ
Trigger: CTGACATTTCAGAAAAGTGCAGGAAGGTGGAGAGCT...GTTATTGGAGAAAGGCAGTGACTCCACATTTCTGGCTTGCATGATAATGCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CCA 90 bp GGACTGAATTACACTATAAGGTGTAACACTGGACCGAAGACTTTTCCATTAAAATTGCCTGTCTCCTTCTaGGGGACAGGGATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: GLNYTIRCNTGPKTFPLKLPVSF*GTGIFP
Trigger: GGGGAAAATCCCTGTCCCCCAGAAGGAGACAGGCAA...TTTTAATGGAAAAGTCTTCGGTCCAGTGTTACACCTTATAGTGTAATTCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp ATAACATCTGTTGACTACCAGACTTCACTGAAATCGGCCGTCTGCTCTCCTGAGAAAACTCCAAACTTGTaGAGATCCCCATGGGAAATA +
Preference number: 4 (lower is better)
Translates to: ITSVDYQTSLKSAVCSPEKTPNL*RSPWEI
Trigger: TATTTCCCATGGGGATCTCCACAAGTTTGGAGTTTT...CTCAGGAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGTCAACAGATGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp ATAACATCTGTTGACTACCAGACTTCACTGAAATCGGCCGTCTGCTCTCCTGAGGTGAAAGTAGTTTCCTaGGAAGTAGGTTTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: ITSVDYQTSLKSAVCSPEVKVVS*EVGFKA
Trigger: AGCTTTAAAACCTACTTCTCAGGAAACTACTTTCAC...CTCAGGAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGTCAACAGATGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp GAAGCTGTACTCTTGATATTTACACCATACAAGACTAGGCTGTTAGGGTTGTCCAACTGGGTCCCTGTGTaGTTATATTGTAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: EAVLLIFTPYKTRLLGLSNWVPV*LYCRVF
Trigger: GAAGACCCTACAATATAATCACACAGGGACCCAGTT...GGACAACCCTAACAGCCTAGTCTTGTATGGTGTAAATATCAAGAGTACAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366968.8
CDS-3UTR TCA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTAAGCAAGTTTCAGATTaGCAAACAGAAGGTATATGG +
Preference number: 4 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFKQVSD*QTEGIW
Trigger: CCATATACCTTCTGTTTGTCAATCTGAAACTTGCTT...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp TCACCACCAATATGTCGATGCCATCACAGTTTCTCTGCACCATATTCCTCTCAGTCACATGTCCAAATCTaGGCTCATCTTTCCCTAAAT +
Preference number: 4 (lower is better)
Translates to: SPPICRCHHSFSAPYSSQSHVQI*AHLSLN
Trigger: ATTTAGGGAAAGATGAGCTCAGATTTGGACATGTGA...CTGAGAGGAATATGGTGCAGAGAAACTGTGATGGCATCGACATATTGGTGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp AGCCAGAGGAGATGCACTGAGACTGAAATAACATCTGTTGACTACCAGACTTCAGTACGTGACCTCTTGTaGTTTTTGTTAGAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SQRRCTETEITSVDYQTSVRDLL*FLLESA
Trigger: TGCAGACTCTAACAAAAAGCACAAGAGGTCACGTAC...TGAAGTCTGGTAGTCAACAGATGTTATTTCAGTCTCAGTGCATCTCCTCTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp TATAAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCATGGGGAACCGCTCAATaGAAGGCTGCCCATTGGTTA +
Preference number: 4 (lower is better)
Translates to: YKTSVTVILKILSEGHSPWGTAQ*KAAHWL
Trigger: TAACCAATGGGCAGCCTTCCATTGAGCGGTTCCCCA...TGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp GGACTGAATTACACTATAAGGTGTAACACTGGACCGAAGACTTTTCCATTAAAAGCTGCTTCCACTCAATaGGCTGGAAGCTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: GLNYTIRCNTGPKTFPLKAASTQ*AGSYEA
Trigger: AGCCTCATAGCTTCCAGCCCATTGAGTGGAAGCAGC...TTTTAATGGAAAAGTCTTCGGTCCAGTGTTACACCTTATAGTGTAATTCAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp TATAAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAGCTGCTTCCACTCAATaGGCTGGAAGCTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: YKTSVTVILKILSEGHSPAASTQ*AGSYEA
Trigger: AGCCTCATAGCTTCCAGCCCATTGAGTGGAAGCAGC...TGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp TATAAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCACCTGCTGATCACTCCTaGTCTCTGCCTGAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: YKTSVTVILKILSEGHSPPADHS*SLPECV
Trigger: AACACACTCAGGCAGAGACCAGGAGTGATCAGCAGG...TGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp TGGTTACCACCCACTCAGATTCTATTTCCAGGTGAATCCTTAAAAATAAAATTCGCATCTTTGAGACGTTaGGGACCAGCTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: WLPPTQILFPGESLKIKFASLRR*GPAAST
Trigger: AGTGGAAGCAGCTGGTCCTCAACGTCTCAAAGATGC...GAATTTTATTTTTAAGGATTCACCTGGAAATAGAATCTGAGTGGGTGGTAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR TCA 90 bp GGGAAACAAGCTATGCAACCATTTGACATTCTGTATTTTAGATGTAACAGTACTGCATCTTTGAGACGTTaGGGACCAGCTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: GKQAMQPFDILYFRCNSTASLRR*GPAAST
Trigger: AGTGGAAGCAGCTGGTCCTCAACGTCTCAAAGATGC...AGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCAGTCCTCCCTTAGTTTaGTTCTTGGCATCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: KTSVTVILKILSEGHSPTSPPLV*FLASFR
Trigger: TCTGAAGGATGCCAAGAATCAAACTAAGGGAGGACT...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp TTCTCCTTTCACTTATTGAACAGTAAGCACAACCTCCTAATCACAGCTCCTAAAAGAGTCAAATTTCCCTaGGTTCAGCAGCGTGAACTG +
Preference number: 4 (lower is better)
Translates to: FSFHLLNSKHNLLITAPKRVKFP*VQQREL
Trigger: CAGTTCACGCTGCTGAACTCAGGGAAATTTGACTCT...TTTAGGAGCTGTGATTAGGAGGTTGTGCTTACTGTTCAATAAGTGAAAGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR GCA 90 bp GTCTGCAGCCAGAGGTTACACTGTAACTACCATATGCAGGCCAGACATTCATTCAAATGGTTCTTGTATTaGCAGAAGAATTTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: VCSQRLHCNYHMQARHSFKWFLY*QKNFSA
Trigger: AGCACTGAAATTCTTCTGGCAATACAAGAACCATTT...GAATGAATGTCTGGCCTGCATATGGTAGTTACAGTGTAACCTCTGGCTGCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCATCACTCCTGGTCTCTaGCTGAGTGTGTTAATGTCA +
Preference number: 4 (lower is better)
Translates to: KTSVTVILKILSEGHSPTITPGL*LSVLMS
Trigger: TGACATTAACACACTCAGGCAGAGACCAGGAGTGAT...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp TGGTTACCACCCACTCAGATTCTATTTCCAGGTGAATCCTTAAAAATAAAATTCTGGGGAACCGCTCAATaGAAGGCTGCCCATTGGTTA +
Preference number: 4 (lower is better)
Translates to: WLPPTQILFPGESLKIKFWGTAQ*KAAHWL
Trigger: TAACCAATGGGCAGCCTTCCATTGAGCGGTTCCCCA...GAATTTTATTTTTAAGGATTCACCTGGAAATAGAATCTGAGTGGGTGGTAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCTGGCCGGTATGGCTTaGCTAAATTCGGATTTGATA +
Preference number: 4 (lower is better)
Translates to: KTSVTVILKILSEGHSPTLAGMA*LNSDLI
Trigger: TATCAAATCCGAATTTAGCCAAGCCATACCGGCCAG...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp AGCCAGAGGAGATGCACTGAGACTGAAATAACATCTGTTGACTACCAGACTTCAAAAACTCCAAACTTGTaGAGATCCCCATGGGAAATA +
Preference number: 4 (lower is better)
Translates to: SQRRCTETEITSVDYQTSKTPNL*RSPWEI
Trigger: TATTTCCCATGGGGATCTCCACAAGTTTGGAGTTTT...TGAAGTCTGGTAGTCAACAGATGTTATTTCAGTCTCAGTGCATCTCCTCTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTATGGAGATGTATACTTaGTCTTGTTCATCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFMEMYT*SCSSKG
Trigger: TCCTTTAGATGAACAAGACCAAGTATACATCTCCAT...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp TATAAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCACCTCAAAGTCAAAGATaGGGTCACTCAGAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: YKTSVTVILKILSEGHSPPQSQR*GHSESE
Trigger: TTCGGACTCTGAGTGACCTCATCTTTGACTTTGAGG...TGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR TCA 90 bp GAAGCTGTACTCTTGATATTTACACCATACAAGACTAGGCTGTTAGGGTTGTCCGTAACTCCAAGATCCTaGAAATGGTTCTTGTATTGC +
Preference number: 4 (lower is better)
Translates to: EAVLLIFTPYKTRLLGLSVTPRS*KWFLYC
Trigger: GCAATACAAGAACCATTTTCAGGATCTTGGAGTTAC...GGACAACCCTAACAGCCTAGTCTTGTATGGTGTAAATATCAAGAGTACAGCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp GGGAAACAAGCTATGCAACCATTTGACATTCTGTATTTTAGATGTAACAGTACTTTGTCCTGTGTGGTCTaGAGCCAGAGGTTACACTGT +
Preference number: 4 (lower is better)
Translates to: GKQAMQPFDILYFRCNSTLSCVV*SQRLHC
Trigger: ACAGTGTAACCTCTGGCTGCAGACCACACAGGACAA...AGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp GAAGCTGTACTCTTGATATTTACACCATACAAGACTAGGCTGTTAGGGTTGTCCTCTTGTGCACCCTTTTaGTTTGAAGTCCTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: EAVLLIFTPYKTRLLGLSSCAPF*FEVLLL
Trigger: AAGCAAAAGGACTTCAAAGCAAAAGGGTGCACAAGA...GGACAACCCTAACAGCCTAGTCTTGTATGGTGTAAATATCAAGAGTACAGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp GAAGCTGTACTCTTGATATTTACACCATACAAGACTAGGCTGTTAGGGTTGTCCGTGGGAAACAAGCTATaGAACCATTTGACATTCTGT +
Preference number: 4 (lower is better)
Translates to: EAVLLIFTPYKTRLLGLSVGNKL*NHLTFC
Trigger: ACAGAATGTCAAATGGTTGCATAGCTTGTTTCCCAC...GGACAACCCTAACAGCCTAGTCTTGTATGGTGTAAATATCAAGAGTACAGCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp TTCTCCTTTCACTTATTGAACAGTAAGCACAACCTCCTAATCACAGCTCCTAAACCACCAATATGTCGATaGCATCACAGTTTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: FSFHLLNSKHNLLITAPKPPICR*HHSFSA
Trigger: TGCAGAGAAACTGTGATGGCATCGACATATTGGTGG...TTTAGGAGCTGTGATTAGGAGGTTGTGCTTACTGTTCAATAAGTGAAAGGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CCA 90 bp TATAAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAATAGTCCAACCCCAGTaGGGCTTATTACTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: YKTSVTVILKILSEGHSPIVQPQ*GLLLQP
Trigger: AGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTAT...TGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR TCA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCTTATCCTTAAGATCTTaGGTGAGGGACATAGTCCAA +
Preference number: 4 (lower is better)
Translates to: KTSVTVILKILSEGHSPTLSLRS*VRDIVQ
Trigger: TTGGACTATGTCCCTCACTCAAGATCTTAAGGATAA...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR TCA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCGTAACTCCAAGATCCTaGAAATGGTTCTTGTATTGC +
Preference number: 4 (lower is better)
Translates to: KTSVTVILKILSEGHSPTVTPRS*KWFLYC
Trigger: GCAATACAAGAACCATTTTCAGGATCTTGGAGTTAC...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp GGACTGAATTACACTATAAGGTGTAACACTGGACCGAAGACTTTTCCATTAAAAAGTCCTCCCTTAGTTTaGTTCTTGGCATCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: GLNYTIRCNTGPKTFPLKSPPLV*FLASFR
Trigger: TCTGAAGGATGCCAAGAATCAAACTAAGGGAGGACT...TTTTAATGGAAAAGTCTTCGGTCCAGTGTTACACCTTATAGTGTAATTCAGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCACTATTTCAAACATCTaGATACATGTGGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: KTSVTVILKILSEGHSPTTISNI*IHVAKR
Trigger: CCTCTTGGCCACATGTATTCAGATGTTTGAAATAGT...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp GGGAAACAAGCTATGCAACCATTTGACATTCTGTATTTTAGATGTAACAGTACTCCACTTCATTCAGAGTaGTCAGATCAGCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: GKQAMQPFDILYFRCNSTPLHSE*SDQPPS
Trigger: AGAAGGTGGCTGATCTGAGCACTCTGAATGAAGTGG...AGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp ATCAAGCCAGTTGGCAGTTCTAAGGCTTCTTTATCAGCATATTACAGAGTTTGTGTACGTGACCTCTTGTaGTTTTTGTTAGAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: IKPVGSSKASLSAYYRVCVRDLL*FLLESA
Trigger: TGCAGACTCTAACAAAAAGCACAAGAGGTCACGTAC...ACAAACTCTGTAATATGCTGATAAAGAAGCCTTAGAACTGCCAACTGGCTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCTCTTGTGCACCCTTTTaGTTTGAAGTCCTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: KTSVTVILKILSEGHSPTSCAPF*FEVLLL
Trigger: AAGCAAAAGGACTTCAAAGCAAAAGGGTGCACAAGA...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp GGGAAACAAGCTATGCAACCATTTGACATTCTGTATTTTAGATGTAACAGTACTAGTCCGAAAAGTCAATaGCTTGTCCATCAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GKQAMQPFDILYFRCNSTSPKSQ*LVHQLS
Trigger: GCTGAGCTGATGGACAAGCCATTGACTTTTCGGACT...AGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp TATAAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCACTGGCCGGTATGGCTTaGCTAAATTCGGATTTGATA +
Preference number: 4 (lower is better)
Translates to: YKTSVTVILKILSEGHSPLAGMA*LNSDLI
Trigger: TATCAAATCCGAATTTAGCCAAGCCATACCGGCCAG...TGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp TGGTTACCACCCACTCAGATTCTATTTCCAGGTGAATCCTTAAAAATAAAATTCATAGTCCAACCCCAGTaGGGCTTATTACTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: WLPPTQILFPGESLKIKFIVQPQ*GLLLQP
Trigger: AGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTAT...GAATTTTATTTTTAAGGATTCACCTGGAAATAGAATCTGAGTGGGTGGTAACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CCA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCCCATGGGAAATACTaGGGAAAGAATACAAATAGA +
Preference number: 4 (lower is better)
Translates to: KTSVTVILKILSEGHSPTPHGKY*GKNTNR
Trigger: TCTATTTGTATTCTTTCCCCAGTATTTCCCATGGGG...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp ATCAAGCCAGTTGGCAGTTCTAAGGCTTCTTTATCAGCATATTACAGAGTTTGTCAGACATTCATTCTGTaGTTAGGGACTGAATTACAC +
Preference number: 4 (lower is better)
Translates to: IKPVGSSKASLSAYYRVCQTFIL*LGTELH
Trigger: GTGTAATTCAGTCCCTAAGCACAGAATGAATGTCTG...ACAAACTCTGTAATATGCTGATAAAGAAGCCTTAGAACTGCCAACTGGCTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp ATCAAGCCAGTTGGCAGTTCTAAGGCTTCTTTATCAGCATATTACAGAGTTTGTACTGTAACTACCATATaGAGGCCAGACATTCATTCT +
Preference number: 4 (lower is better)
Translates to: IKPVGSSKASLSAYYRVCTVTTI*RPDIHS
Trigger: AGAATGAATGTCTGGCCTGCATATGGTAGTTACAGT...ACAAACTCTGTAATATGCTGATAAAGAAGCCTTAGAACTGCCAACTGGCTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCTTCCAACTCTTAGAATaGTTGCAGTGTTATAAGAGG +
Preference number: 4 (lower is better)
Translates to: KTSVTVILKILSEGHSPTFQLLE*LQCYKR
Trigger: CCTCTTATAACACTGCAACCATTCTAAGAGTTGGAA...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp GGACTGAATTACACTATAAGGTGTAACACTGGACCGAAGACTTTTCCATTAAAAACTATTTCAAACATCTaGATACATGTGGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: GLNYTIRCNTGPKTFPLKTISNI*IHVAKR
Trigger: CCTCTTGGCCACATGTATTCAGATGTTTGAAATAGT...TTTTAATGGAAAAGTCTTCGGTCCAGTGTTACACCTTATAGTGTAATTCAGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCATGGAGATGTATACTTaGTCTTGTTCATCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: KTSVTVILKILSEGHSPTMEMYT*SCSSKG
Trigger: TCCTTTAGATGAACAAGACCAAGTATACATCTCCAT...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CCA 90 bp ATCAAGCCAGTTGGCAGTTCTAAGGCTTCTTTATCAGCATATTACAGAGTTTGTTTCCAACTCTTAGAATaGTTGCAGTGTTATAAGAGG +
Preference number: 4 (lower is better)
Translates to: IKPVGSSKASLSAYYRVCFQLLE*LQCYKR
Trigger: CCTCTTATAACACTGCAACCATTCTAAGAGTTGGAA...ACAAACTCTGTAATATGCTGATAAAGAAGCCTTAGAACTGCCAACTGGCTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR CAA 72 bp GGAGAAATTAGCTTACTAATTGAACCATCAAGCCAGTaGGCAGTTCTAAGGCTTCTTTATCAGCATATTACA +
Preference number: 4 (lower is better)
Translates to: GEISLLIEPSSQ*AVLRLLYQHIT
Trigger: TGTAATATGCTGATAAAGAAGCCTTAGAACTGCCAACTGGCTTGATGGTTCAATTAGTAAGCTAATTTCTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp TATAAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAAAGCAAGTTTCAGATTaGCAAACAGAAGGTATATGG +
Preference number: 4 (lower is better)
Translates to: YKTSVTVILKILSEGHSPKQVSD*QTEGIW
Trigger: CCATATACCTTCTGTTTGTCAATCTGAAACTTGCTT...TGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR TCA 90 bp TGGTTACCACCCACTCAGATTCTATTTCCAGGTGAATCCTTAAAAATAAAATTCACTTTCAAGTTTGTGTaGCTAAACCTTGCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: WLPPTQILFPGESLKIKFTFKFV*LNLALG
Trigger: TCCCAAAGCAAGGTTTAGTCACACAAACTTGAAAGT...GAATTTTATTTTTAAGGATTCACCTGGAAATAGAATCTGAGTGGGTGGTAACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp ATCAAGCCAGTTGGCAGTTCTAAGGCTTCTTTATCAGCATATTACAGAGTTTGTAAATGGTTCTTGTATTaGCAGAAGAATTTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: IKPVGSSKASLSAYYRVCKWFLY*QKNFSA
Trigger: AGCACTGAAATTCTTCTGGCAATACAAGAACCATTT...ACAAACTCTGTAATATGCTGATAAAGAAGCCTTAGAACTGCCAACTGGCTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp TATAAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCATGTGTGACTAAACCTTaGTTTGGGAAAATTAGTCTA +
Preference number: 4 (lower is better)
Translates to: YKTSVTVILKILSEGHSPCVTKP*FGKISL
Trigger: TAGACTAATTTTCCCAAAGCAAGGTTTAGTCACACA...TGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
3UTR CAA 72 bp TTCCTCCTTGTTGTGGGAAACAAGCTATGCAACCATTaGACATTCTGTATTTTAGATGTAACAGTACTTAAT +
Preference number: 4 (lower is better)
Translates to: FLLVVGNKLCNH*TFCILDVTVLN
Trigger: ATTAAGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCCACAACAAGGAGGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR GCA 90 bp TGGTTACCACCCACTCAGATTCTATTTCCAGGTGAATCCTTAAAAATAAAATTCTGTGTGACTAAACCTTaGTTTGGGAAAATTAGTCTA +
Preference number: 4 (lower is better)
Translates to: WLPPTQILFPGESLKIKFCVTKP*FGKISL
Trigger: TAGACTAATTTTCCCAAAGCAAGGTTTAGTCACACA...GAATTTTATTTTTAAGGATTCACCTGGAAATAGAATCTGAGTGGGTGGTAACCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS GCA 90 bp CCTCTGAGCCCCCGCTGGTGGCGAGGCTCACGGGCCGCGCGTGGCTaGTCCGGGACCGGGTGCCTTTGGCGCCAAGGGGGAGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: PLSPRWWRGSRAARG*SGTGCLWRQGGAAA
Trigger: CGCCGCCGCTCCCCCTTGGCGCCAAAGGCACCCGGTCCCGGAGCAGCCACGCGCGGCCCGTGAGCCTCGCCACCAGCGGGGGCTCAGAGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366968.8
ENST00000490792.1
CDS CCA 90 bp TCCTCCTCTGAGCCCCCGCTGGTGGCGAGGCTCACGGGCCGCGCGTaGCTGCTCCGGGACCGGGTGCCTTTGGCGCCAAGGGGGAGCGGC +
Preference number: 5 (lower is better)
Translates to: SSSEPPLVARLTGRA*LLRDRVPLAPRGSG
Trigger: GCCGCTCCCCCTTGGCGCCAAAGGCACCCGGTCCCGGAGCAGCCACGCGCGGCCCGTGAGCCTCGCCACCAGCGGGGGCTCAGAGGAGGA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366968.8
ENST00000490792.1
CDS CCA 90 bp CGGGCCGCGCGTGGCTGCTCCGGGACCGGGTGCCTTTGGCGCCTTTaGGGTGGGGGCAGCGGTGAGTGTCGGCCGCGGAGCCGGTCATGG +
Preference number: 5 (lower is better)
Translates to: RAARGCSGTGCLWRL*GGGSGECRPRSRSW
Trigger: CCATGACCGGCTCCGCGGCCGACACTCACCGCTGCCCCCACCCCAAAGGCGCCAAAGGCACCCGGTCCCGGAGCAGCCACGCGCGGCCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000493155.1
ENST00000517399.3
CDS CCA 90 bp TCCTCCTCTGAGCCCCCGCTGGTGGCGAGGCTCACGGGCCGCGCGTaGCTGCTCCGGGACCGGGTGCCTTTGGCGCCTTTGGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: SSSEPPLVARLTGRA*LLRDRVPLAPLGWG
Trigger: CCCCCACCCCAAAGGCGCCAAAGGCACCCGGTCCCGGAGCAGCCACGCGCGGCCCGTGAGCCTCGCCACCAGCGGGGGCTCAGAGGAGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000493155.1
ENST00000517399.3
CDS CCA 90 bp ACAGCACCCCGCCGTCTTTGTCCTCCTCCTCTGAGCCCCCGCTGGTaGCGAGGCTCACGGGCCGCGCGTGGCTGCTCCGGGACCGGGTGC +
Preference number: 5 (lower is better)
Translates to: TAPRRLCPPPLSPRW*RGSRAARGCSGTGC
Trigger: GCACCCGGTCCCGGAGCAGCCACGCGCGGCCCGTGAGCCTCGCCACCAGCGGGGGCTCAGAGGAGGAGGACAAAGACGGCGGGGTGCTGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000366968.8
ENST00000490792.1
ENST00000493155.1
ENST00000517399.3
CDS CCA 90 bp GGAACAGCACCCCGCCGTCTTTGTCCTCCTCCTCTGAGCCCCCGCTaGTGGCGAGGCTCACGGGCCGCGCGTGGCTGCTCCGGGACCGGG +
Preference number: 5 (lower is better)
Translates to: GTAPRRLCPPPLSPR*WRGSRAARGCSGTG
Trigger: CCCGGTCCCGGAGCAGCCACGCGCGGCCCGTGAGCCTCGCCACCAGCGGGGGCTCAGAGGAGGAGGACAAAGACGGCGGGGTGCTGTTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000366968.8
ENST00000490792.1
ENST00000493155.1
ENST00000517399.3
CDS GCA 90 bp GCTCCCTGCTTACCGGCGGTGCCTCGGGACGGTTGGCTTCATGGCTaGAGAGCCTCTCCGGGCGGCGGGAGAGCAGGGGCTGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: APCLPAVPRDGWLHG*RASPGGGRAGAAAA
Trigger: AGCAGCAGCAGCCCCTGCTCTCCCGCCGCCCGGAGAGGCTCTGCAGCCATGAAGCCAACCGTCCCGAGGCACCGCCGGTAAGCAGGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
ENST00000517399.3
CDS TCA 90 bp CTTGTTGACGTGGAACAGCACCCCGCCGTCTTTGTCCTCCTCCTCTaGGCCCCCGCTGGTGGCGAGGCTCACGGGCCGCGCGTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: LVDVEQHPAVFVLLL*APAGGEAHGPRVAA
Trigger: AGCAGCCACGCGCGGCCCGTGAGCCTCGCCACCAGCGGGGGCTCAGAGGAGGAGGACAAAGACGGCGGGGTGCTGTTCCACGTCAACAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000366968.8
ENST00000490792.1
ENST00000493155.1
ENST00000517399.3
CDS GCA 90 bp GGGCTTCCAGCCCTGCGATTACCTCGGGACGGTTGGCTTCATGGCTaGAGAGCCTCTCCGGGCGGCGGGAGAGCAGGGGCTGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: GLPALRLPRDGWLHG*RASPGGGRAGAAAA
Trigger: AGCAGCAGCAGCCCCTGCTCTCCCGCCGCCCGGAGAGGCTCTGCAGCCATGAAGCCAACCGTCCCGAGGTAATCGCAGGGCTGGAAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490792.1
CDS GCA 90 bp TTGGGACCTGGGGTATTGAAGGCTCGGGACGGTTGGCTTCATGGCTaGAGAGCCTCTCCGGGCGGCGGGAGAGCAGGGGCTGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LGPGVLKARDGWLHG*RASPGGGRAGAAAA
Trigger: AGCAGCAGCAGCCCCTGCTCTCCCGCCGCCCGGAGAGGCTCTGCAGCCATGAAGCCAACCGTCCCGAGCCTTCAATACCCCAGGTCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271776.4
ENST00000366967.6
CDS GCA 90 bp GGAGCGGCGGCGGGAGCTCCGCGGAGGCTCCCTGCTTACCGGCGGTaGCTGAAATCAGCGGAGACACAGCTGACACCACAGCTAAGTGGA +
Preference number: 5 (lower is better)
Translates to: GAAAGAPRRLPAYRR*LKSAETQLTPQLSG
Trigger: TCCACTTAGCTGTGGTGTCAGCTGTGTCTCCGCTGATTTCAGGCACCGCCGGTAAGCAGGGAGCCTCCGCGGAGCTCCCGCCGCCGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490792.1
CDS TCA 90 bp ACATGCGCTCCCAGGTGTGGCTGTCGATGGGGAAGCCGCTCTTGTTaGCGTGGAACAGCACCCCGCCGTCTTTGTCCTCCTCCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: TCAPRCGCRWGSRSC*RGTAPRRLCPPPLS
Trigger: GCTCAGAGGAGGAGGACAAAGACGGCGGGGTGCTGTTCCACGTCAACAAGAGCGGCTTCCCCATCGACAGCCACACCTGGGAGCGCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
ENST00000490792.1
ENST00000493155.1
ENST00000517399.3
CDS CCA 90 bp GGCTCCCCGAGGAGGAAGGATGTGCCCAGCTGCACAGCTAACACGTaGCACAGTTGGGATTCAACCAAGCCCCCTGTGCACTGTGCCACA +
Preference number: 5 (lower is better)
Translates to: GSPRRKDVPSCTANT*HSWDSTKPPVHCAT
Trigger: TGTGGCACAGTGCACAGGGGGCTTGGTTGAATCCCAACTGTGCCACGTGTTAGCTGTGCAGCTGGGCACATCCTTCCTCCTCGGGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS GCA 90 bp CCACCCTGGAAGCTAGAATTCACCACTGAGCTCCACTGTCAGAGTTaGTCAGTCCTCAGTCCCACCTCCAACCTGGCCCTGGGGCACCCT +
Preference number: 5 (lower is better)
Translates to: PPWKLEFTTELHCQS*SVLSPTSNLALGHP
Trigger: AGGGTGCCCCAGGGCCAGGTTGGAGGTGGGACTGAGGACTGAGCAACTCTGACAGTGGAGCTCAGTGGTGAATTCTAGCTTCCAGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481097.1
CDS CCA 90 bp GGCACCCTCCGCCTCCACCCCTTACAGACTAGGATACCTGAGCCATaGGCTACGGGAATAGAGGTTGGGAGAGGAAGCTGGCAGCTCGAA +
Preference number: 5 (lower is better)
Translates to: GTLRLHPLQTRIPEP*ATGIEVGRGSWQLE
Trigger: TTCGAGCTGCCAGCTTCCTCTCCCAACCTCTATTCCCGTAGCCCATGGCTCAGGTATCCTAGTCTGTAAGGGGTGGAGGCGGAGGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481097.1
CDS GCA 90 bp GATGACCAGCTGGGGACAGATTTGCCACCAGGCTTGCGATCACCATaGCTGTCCCCTGGCTGGGTGTGCTCAGACCTTGGTTGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: DDQLGTDLPPGLRSP*LSPGWVCSDLGWKD
Trigger: ATCCTTCCAACCAAGGTCTGAGCACACCCAGCCAGGGGACAGGCATGGTGATCGCAAGCCTGGTGGCAAATCTGTCCCCAGCTGGTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS CCA 90 bp GGGGACAGATTTGCCACCAGGCTTGCGATCACCATGCCTGTCCCCTaGCTGGGTGTGCTCAGACCTTGGTTGGAAGGATACTGTAGGGTC +
Preference number: 5 (lower is better)
Translates to: GDRFATRLAITMPVP*LGVLRPWLEGYCRV
Trigger: GACCCTACAGTATCCTTCCAACCAAGGTCTGAGCACACCCAGCCAGGGGACAGGCATGGTGATCGCAAGCCTGGTGGCAAATCTGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS-3UTR CAA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTCGGGACCGGGTGCCTTaGGCGCCTTTGGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFRDRVP*APLGWG
Trigger: CCCCCACCCCAAAGGCGCCAAAGGCACCCGGTCCCG...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366965.6
CDS CCA 90 bp AGGAGGAAGGATGTGCCCAGCTGCACAGCTAACACGTGGCACAGTTaGGATTCAACCAAGCCCCCTGTGCACTGTGCCACATGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: RRKDVPSCTANTWHS*DSTKPPVHCATWFQ
Trigger: CTGGAACCATGTGGCACAGTGCACAGGGGGCTTGGTTGAATCCCAACTGTGCCACGTGTTAGCTGTGCAGCTGGGCACATCCTTCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCGGTGCCTCGGGACGGTaGGCTTCATGGCTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCGASGR*ASWLQS
Trigger: GCTCTGCAGCCATGAAGCCAACCGTCCCGAGGCACC...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCAGCACCCCGCCGTCTTaGTCCTCCTCCTCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCSTPPS*SSSSEP
Trigger: GGGCTCAGAGGAGGAGGACAAAGACGGCGGGGTGCT...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CTGAAATCCATTCCCATCCCCAGGGCCATGAGTCTAGCCTCACCATTCCCTCATGGGAAGCCGCTCTTGTaGACGTGGAACAGCACCCCG +
Preference number: 5 (lower is better)
Translates to: LKSIPIPRAMSLASPFPHGKPLL*TWNSTP
Trigger: CGGGGTGCTGTTCCACGTCAACAAGAGCGGCTTCCC...ATGAGGGAATGGTGAGGCTAGACTCATGGCCCTGGGGATGGGAATGGATTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CAA 90 bp CTAAGCAGTCCCCTAGTGGTGGTGATGATGTATGCCTCCATCCCTTCCCTCCACAGCTCCCAACGGGCTTaGCTGATCCAGCCCAGCCTT +
Preference number: 5 (lower is better)
Translates to: LSSPLVVVMMYASIPSLHSSQRA*LIQPSL
Trigger: AAGGCTGGGCTGGATCAGCAAAGCCCGTTGGGAGCT...GTGGAGGGAAGGGATGGAGGCATACATCATCACCACCACTAGGGGACTGCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS TCA 90 bp AGTCAATGGCTTGTCCATCAGCTCAGCCCTGCGGCTCATGCCCAATaGGCCATAGCGGCCATTGCAGTAAATCCCCAGCACAACGTGGTG +
Preference number: 5 (lower is better)
Translates to: SQWLVHQLSPAAHAQ*AIAAIAVNPQHNVV
Trigger: CACCACGTTGTGCTGGGGATTTACTGCAATGGCCGCTATGGCTCATTGGGCATGAGCCGCAGGGCTGAGCTGATGGACAAGCCATTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271776.4
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000366969.2
ENST00000517399.3
CDS GCA 90 bp CACATTGTGCTCCCTGTGCCGTGTAGAGAGAGGAACACAGCCCAATaGCTCAGTCTCCCCGGGGCTGTGTTTGTTTGCTTGGCAAGTTCC +
Preference number: 5 (lower is better)
Translates to: HIVLPVPCRERNTAQ*LSLPGAVFVCLASS
Trigger: GGAACTTGCCAAGCAAACAAACACAGCCCCGGGGAGACTGAGGCATTGGGCTGTGTTCCTCTCTCTACACGGCACAGGGAGCACAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS CCA 90 bp TGGCACAGTTGGGATTCAACCAAGCCCCCTGTGCACTGTGCCACATaGTTCCAGCATGGCAAGAGGCTGGGTGACACAGCATGCTGCTAT +
Preference number: 5 (lower is better)
Translates to: WHSWDSTKPPVHCAT*FQHGKRLGDTACCY
Trigger: ATAGCAGCATGCTGTGTCACCCAGCCTCTTGCCATGCTGGAACCATGTGGCACAGTGCACAGGGGGCTTGGTTGAATCCCAACTGTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCTCCCCGGCTTCTCACTaGGGTCGGAGAGTGGGCACT +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCSPASH*GRRVGT
Trigger: AGTGCCCACTCTCCGACCCAAGTGAGAAGCCGGGGA...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp AAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCAGCACCCCGCCGTCTTaGTCCTCCTCCTCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: KILSEGHSPTPVGLITSASTPPS*SSSSEP
Trigger: GGGCTCAGAGGAGGAGGACAAAGACGGCGGGGTGCT...GGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCGGGAAGCCGCTCTTGTaGACGTGGAACAGCACCCCG +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCGKPLL*TWNSTP
Trigger: CGGGGTGCTGTTCCACGTCAACAAGAGCGGCTTCCC...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
CDS-3UTR CAA 90 bp TTCCCCTTCGTTGATCTCTTCCACCAGCAAATCCCCAGCCAATCATCTGCCCCCGGGGTATTGAAGGCTTaGCCAAGAAGGCGGCGTTCC +
Preference number: 5 (lower is better)
Translates to: FPFVDLFHQQIPSQSSAPGVLKA*PRRRRS
Trigger: GGAACGCCGCCTTCTTGGCAAAGCCTTCAATACCCC...GGGGGCAGATGATTGGCTGGGGATTTGCTGGTGGAAGAGATCAACGAAGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CAA 90 bp CAGCAGCGTGAACTGAAGCTCTCCACCTTCCTGCACTTTTCTGAAATGTCAGAAGGTGCCTCGGGACGGTaGGCTTCATGGCTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: QQRELKLSTFLHFSEMSEGASGR*ASWLQS
Trigger: GCTCTGCAGCCATGAAGCCAACCGTCCCGAGGCACC...TTCTGACATTTCAGAAAAGTGCAGGAAGGTGGAGAGCTTCAGTTCACGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CAA 90 bp CAAGCCAGAAATGTGGAGTCACTGCCTTTCTCCAATAACTCCTCCCATCTAAGCAGCACCCCGCCGTCTTaGTCCTCCTCCTCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: QARNVESLPFSNNSSHLSSTPPS*SSSSEP
Trigger: GGGCTCAGAGGAGGAGGACAAAGACGGCGGGGTGCT...GCTTAGATGGGAGGAGTTATTGGAGAAAGGCAGTGACTCCACATTTCTGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCCCTTAGGGTGCACCTaGGCCACGTGCATCCACATG +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCPLGCT*ATCIHM
Trigger: CATGTGGATGCACGTGGCCAAGGTGCACCCTAAGGG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
CDS-3UTR CAA 90 bp TTCCCCTTCGTTGATCTCTTCCACCAGCAAATCCCCAGCCAATCATCTGCCCCCATGAAGGGCCTGGGCTaGTGTTCCCCTTCGTTGATC +
Preference number: 5 (lower is better)
Translates to: FPFVDLFHQQIPSQSSAPMKGLG*CSPSLI
Trigger: GATCAACGAAGGGGAACACAAGCCCAGGCCCTTCAT...GGGGGCAGATGATTGGCTGGGGATTTGCTGGTGGAAGAGATCAACGAAGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS TCA 90 bp GAGACGTTGAGGACCAGCTGCTTCCACTCAATGGGCTGGAAGCTATaGGGCTCATGGGGGACGTACAGCCCAATCTTGACCTTCTTGACT +
Preference number: 5 (lower is better)
Translates to: ETLRTSCFHSMGWKL*GSWGTYSPILTFLT
Trigger: AGTCAAGAAGGTCAAGATTGGGCTGTACGTCCCCCATGAGCCTCATAGCTTCCAGCCCATTGAGTGGAAGCAGCTGGTCCTCAACGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000271776.4
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000366969.2
ENST00000517399.3
CDS TCA 90 bp GGGGCCGTCGCCTCATTCCATGTCCCATTCTCGAATGTTATTCTGTaGCATATAACCAAGTCACCCGGGCAGCCGCCGATGTTCCGAATG +
Preference number: 5 (lower is better)
Translates to: GAVASFHVPFSNVIL*HITKSPGQPPMFRM
Trigger: CATTCGGAACATCGGCGGCTGCCCGGGTGACTTGGTTATATGTCACAGAATAACATTCGAGAATGGGACATGGAATGAGGCGACGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366966.6
CDS GCA 90 bp TTGCCACCAGGCTTGCGATCACCATGCCTGTCCCCTGGCTGGGTGTaGTCAGACCTTGGTTGGAAGGATACTGTAGGGTCTTCATGTAAT +
Preference number: 5 (lower is better)
Translates to: LPPGLRSPCLSPGWV*SDLGWKDTVGSSCN
Trigger: ATTACATGAAGACCCTACAGTATCCTTCCAACCAAGGTCTGAGCACACCCAGCCAGGGGACAGGCATGGTGATCGCAAGCCTGGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS GCA 90 bp TCAGCTCAGCCCTGCGGCTCATGCCCAATGAGCCATAGCGGCCATTaGAGTAAATCCCCAGCACAACGTGGTGAAAGTAGTTTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: SAQPCGSCPMSHSGH*SKSPAQRGESSFLR
Trigger: TCTCAGGAAACTACTTTCACCACGTTGTGCTGGGGATTTACTGCAATGGCCGCTATGGCTCATTGGGCATGAGCCGCAGGGCTGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271776.4
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000366969.2
ENST00000517399.3
CDS GCA 90 bp TCCGAAAAGTCAATGGCTTGTCCATCAGCTCAGCCCTGCGGCTCATaGCCAATGAGCCATAGCGGCCATTGCAGTAAATCCCCAGCACAA +
Preference number: 5 (lower is better)
Translates to: SEKSMACPSAQPCGS*PMSHSGHCSKSPAQ
Trigger: TTGTGCTGGGGATTTACTGCAATGGCCGCTATGGCTCATTGGGCATGAGCCGCAGGGCTGAGCTGATGGACAAGCCATTGACTTTTCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271776.4
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000366969.2
ENST00000517399.3
CDS GCA 90 bp CACTCAGAGTCCGAAAAGTCAATGGCTTGTCCATCAGCTCAGCCCTaGGGCTCATGCCCAATGAGCCATAGCGGCCATTGCAGTAAATCC +
Preference number: 5 (lower is better)
Translates to: HSESEKSMACPSAQP*GSCPMSHSGHCSKS
Trigger: GGATTTACTGCAATGGCCGCTATGGCTCATTGGGCATGAGCCGCAGGGCTGAGCTGATGGACAAGCCATTGACTTTTCGGACTCTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271776.4
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000366969.2
ENST00000517399.3
CDS-3UTR CAA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTTCCCCGGCTTCTCACTaGGGTCGGAGAGTGGGCACT +
Preference number: 5 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFSPASH*GRRVGT
Trigger: AGTGCCCACTCTCCGACCCAAGTGAGAAGCCGGGGA...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp ATCAAGCCAGTTGGCAGTTCTAAGGCTTCTTTATCAGCATATTACAGAGTTTGTCGGGACCGGGTGCCTTaGGCGCCAAGGGGGAGCGGC +
Preference number: 5 (lower is better)
Translates to: IKPVGSSKASLSAYYRVCRDRVP*APRGSG
Trigger: GCCGCTCCCCCTTGGCGCCAAAGGCACCCGGTCCCG...ACAAACTCTGTAATATGCTGATAAAGAAGCCTTAGAACTGCCAACTGGCTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366968.8
CDS-3UTR CAA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTGGGAAGCCGCTCTTGTaGACGTGGAACAGCACCCCG +
Preference number: 5 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFGKPLL*TWNSTP
Trigger: CGGGGTGCTGTTCCACGTCAACAAGAGCGGCTTCCC...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp GTCTGCAGCCAGAGGTTACACTGTAACTACCATATGCAGGCCAGACATTCATTCGGGAAGCCGCTCTTGTaGACGTGGAACAGCACCCCG +
Preference number: 5 (lower is better)
Translates to: VCSQRLHCNYHMQARHSFGKPLL*TWNSTP
Trigger: CGGGGTGCTGTTCCACGTCAACAAGAGCGGCTTCCC...GAATGAATGTCTGGCCTGCATATGGTAGTTACAGTGTAACCTCTGGCTGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCATGGGGAAGCCGCTCTaGTTGACGTGGAACAGCACC +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCMGKPL*LTWNST
Trigger: GGTGCTGTTCCACGTCAACAAGAGCGGCTTCCCCAT...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCGGGGTATTGAAGGCTTaGCCAAGAAGGCGGCGTTCC +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCGVLKA*PRRRRS
Trigger: GGAACGCCGCCTTCTTGGCAAAGCCTTCAATACCCC...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
CDS-3UTR CAA 90 bp TTCCCCTTCGTTGATCTCTTCCACCAGCAAATCCCCAGCCAATCATCTGCCCCCTTGGGACCTGGGGTATaGAAGGCTTTGCCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: FPFVDLFHQQIPSQSSAPLGPGV*KALPRR
Trigger: CCTTCTTGGCAAAGCCTTCAATACCCCAGGTCCCAA...GGGGGCAGATGATTGGCTGGGGATTTGCTGGTGGAAGAGATCAACGAAGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCACCACAGAAACCCTCTaGCTGGCCGGTATGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCTTETL*LAGMAW
Trigger: CCAAGCCATACCGGCCAGCAAGAGGGTTTCTGTGGT...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CACCCCTCAACAAAGAGTCTGAAGTTAGCTTGTCTACCCCATGAAGGGCCTGGGCTGCCCCCATTAAACTaGCAGGAGGCTTCGCTGAAC +
Preference number: 5 (lower is better)
Translates to: HPSTKSLKLACLPHEGPGLPPLN*QEASLN
Trigger: GTTCAGCGAAGCCTCCTGCAAGTTTAATGGGGGCAG...CCCAGGCCCTTCATGGGGTAGACAAGCTAACTTCAGACTCTTTGTTGAGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS TCA 90 bp CAGAGTTTACAAGCCTCCTCCACCCTGGAAGCTAGAATTCACCACTaGGCTCCACTGTCAGAGTTGCTCAGTCCTCAGTCCCACCTCCAA +
Preference number: 5 (lower is better)
Translates to: QSLQASSTLEARIHH*APLSELLSPQSHLQ
Trigger: TTGGAGGTGGGACTGAGGACTGAGCAACTCTGACAGTGGAGCTCAGTGGTGAATTCTAGCTTCCAGGGTGGAGGAGGCTTGTAAACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481097.1
CDS GCA 90 bp ACCACTTCCAAGACAGATATACAGATGGTCACATTGTGCTCCCTGTaGCGTGTAGAGAGAGGAACACAGCCCAATGCCTCAGTCTCCCCG +
Preference number: 5 (lower is better)
Translates to: TTSKTDIQMVTLCSL*RVERGTQPNASVSP
Trigger: CGGGGAGACTGAGGCATTGGGCTGTGTTCCTCTCTCTACACGGCACAGGGAGCACAATGTGACCATCTGTATATCTGTCTTGGAAGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS CCA 90 bp GTTGGGAGAGGAAGCTGGCAGCTCGAATGTAGGAGAGAGGTCATCTaGCCCATAGATCATGCACCACTTACCCACTCAGCGGTCTCATTT +
Preference number: 5 (lower is better)
Translates to: VGRGSWQLECRREVI*PIDHAPLTHSAVSF
Trigger: AAATGAGACCGCTGAGTGGGTAAGTGGTGCATGATCTATGGGCCAGATGACCTCTCTCCTACATTCGAGCTGCCAGCTTCCTCTCCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481097.1
CDS-3UTR CAA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTTTGGGACCTGGGGTATaGAAGGCTCGGGACGGTTGG +
Preference number: 5 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFLGPGV*KARDGW
Trigger: CCAACCGTCCCGAGCCTTCAATACCCCAGGTCCCAA...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000366967.6
CDS-3UTR CAA 90 bp CTTCAGCCTGTGCTTTGGAGAACTACCTCTCTAGAGCATATACCTAAGCATGCCCCCTTAGGGTGCACCTaGGCCACGTGCATCCACATG +
Preference number: 5 (lower is better)
Translates to: LQPVLWRTTSLEHIPKHAPLGCT*ATCIHM
Trigger: CATGTGGATGCACGTGGCCAAGGTGCACCCTAAGGG...GGCATGCTTAGGTATATGCTCTAGAGAGGTAGTTCTCCAAAGCACAGGCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CAA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTCCCTTAGGGTGCACCTaGGCCACGTGCATCCACATG +
Preference number: 5 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFPLGCT*ATCIHM
Trigger: CATGTGGATGCACGTGGCCAAGGTGCACCCTAAGGG...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp GTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGGGGGTATTGAAGGCTTaGCCAAGAAGGCGGCGTTCC +
Preference number: 5 (lower is better)
Translates to: VTVILKILSEGHSPTPVGGVLKA*PRRRRS
Trigger: GGAACGCCGCCTTCTTGGCAAAGCCTTCAATACCCC...CCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAAC
53% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp TTCTCCTTTCACTTATTGAACAGTAAGCACAACCTCCTAATCACAGCTCCTAAACGGGACCGGGTGCCTTaGGCGCCTTTGGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: FSFHLLNSKHNLLITAPKRDRVP*APLGWG
Trigger: CCCCCACCCCAAAGGCGCCAAAGGCACCCGGTCCCG...TTTAGGAGCTGTGATTAGGAGGTTGTGCTTACTGTTCAATAAGTGAAAGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS TCA 90 bp CTTCTCACTTGGGTCGGAGAGTGGGCACTTGCAGGTTTCAGGATCTaGAGGAGATGTGAGGAGTTAATCACCCTGGTTCCTAAGGGACCT +
Preference number: 5 (lower is better)
Translates to: LLTWVGEWALAGFRI*RRCEELITLVPKGP
Trigger: AGGTCCCTTAGGAACCAGGGTGATTAACTCCTCACATCTCCTTCAGATCCTGAAACCTGCAAGTGCCCACTCTCCGACCCAAGTGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS TCA 90 bp CCTCCCAATGCCCCAGCACGGGGGCATTACAATAGAACAAATAAATaGAGCCTCGAGAGGCAGAGTTTACAAGCCTCCTCCACCCTGGAA +
Preference number: 5 (lower is better)
Translates to: PPNAPARGHYNRTNK*SLERQSLQASSTLE
Trigger: TTCCAGGGTGGAGGAGGCTTGTAAACTCTGCCTCTCGAGGCTTCATTTATTTGTTCTATTGTAATGCCCCCGTGCTGGGGCATTGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481097.1
CDS GCA 90 bp AGCAAGGGCACCACTTCCAAGACAGATATACAGATGGTCACATTGTaGTCCCTGTGCCGTGTAGAGAGAGGAACACAGCCCAATGCCTCA +
Preference number: 5 (lower is better)
Translates to: SKGTTSKTDIQMVTL*SLCRVERGTQPNAS
Trigger: TGAGGCATTGGGCTGTGTTCCTCTCTCTACACGGCACAGGGAGCACAATGTGACCATCTGTATATCTGTCTTGGAAGTGGTGCCCTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCTCGACAGCCTGTAGTTaGGGACCTGGGGTATTGAAG +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCSTACS*GPGVLK
Trigger: CTTCAATACCCCAGGTCCCAAACTACAGGCTGTCGA...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCGAAAAGTCAATGGCTaGTCCATCAGCTCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCRKVNG*SISSAL
Trigger: CAGGGCTGAGCTGATGGACAAGCCATTGACTTTTCG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCAGCATCTTTGAGACGTaGAGGACCAGCTGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCSIFET*RTSCFH
Trigger: GTGGAAGCAGCTGGTCCTCAACGTCTCAAAGATGCT...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCTTGGGACCTGGGGTATaGAAGGCTTTGCCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCLGPGV*KALPRR
Trigger: CCTTCTTGGCAAAGCCTTCAATACCCCAGGTCCCAA...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCTCGGAGAGTGGGCACTaGCAGGTTTCAGGATCTTCA +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCSESGH*QVSGSS
Trigger: TGAAGATCCTGAAACCTGCAAGTGCCCACTCTCCGA...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CACCCCTCAACAAAGAGTCTGAAGTTAGCTTGTCTACCCCATGAAGGGCCTGGGCATGTTTCATCTCCTTaGTGGGAAACAGGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: HPSTKSLKLACLPHEGPGHVSSP*WETGRR
Trigger: CCTCCTCCCTGTTTCCCACAAAGGAGATGAAACATG...CCCAGGCCCTTCATGGGGTAGACAAGCTAACTTCAGACTCTTTGTTGAGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS CCA 90 bp GCAGAGAGAAGCACCACAGAAACCCTCTTGCTGGCCGGTATGGCTTaGCTAAATTCGGATTTGATAGCCCACTTCATTCAGAGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: AERSTTETLLLAGMA*LNSDLIAHFIQSAQ
Trigger: CTGAGCACTCTGAATGAAGTGGGCTATCAAATCCGAATTTAGCCAAGCCATACCGGCCAGCAAGAGGGTTTCTGTGGTGCTTCTCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000517399.3
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCACAGCTTCAAGGCATTaGATAGGCAAGGACTCTCGG +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCTASRH*IGKDSR
Trigger: CCGAGAGTCCTTGCCTATCAAATGCCTTGAAGCTGT...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp AAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCCGAAAAGTCAATGGCTaGTCCATCAGCTCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: KILSEGHSPTPVGLITSARKVNG*SISSAL
Trigger: CAGGGCTGAGCTGATGGACAAGCCATTGACTTTTCG...GGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCACGTACAGCCCAATCTaGACCTTCTTGACTGTGTGC +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCTYSPI*TFLTVC
Trigger: GCACACAGTCAAGAAGGTCAAGATTGGGCTGTACGT...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp GTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGAGCATCTTTGAGACGTaGAGGACCAGCTGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: VTVILKILSEGHSPTPVGSIFET*RTSCFH
Trigger: GTGGAAGCAGCTGGTCCTCAACGTCTCAAAGATGCT...CCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp TCCAAACTTGTGGAGATCCCCATGGGAAATACTGGGGAAAGAATACAAATAGAAGGTGCCTCGGGACGGTaGGCTTCATGGCTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: SKLVEIPMGNTGERIQIEGASGR*ASWLQS
Trigger: GCTCTGCAGCCATGAAGCCAACCGTCCCGAGGCACC...TTCTATTTGTATTCTTTCCCCAGTATTTCCCATGGGGATCTCCACAAGTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp ACCTTCACTGGCACTGTCTTAGTTCAGGTCTGCATTGACGCATATCCTTTCTCTATGGGGAAGCCGCTCTaGTTGACGTGGAACAGCACC +
Preference number: 5 (lower is better)
Translates to: TFTGTVLVQVCIDAYPFSMGKPL*LTWNST
Trigger: GGTGCTGTTCCACGTCAACAAGAGCGGCTTCCCCAT...AGAGAAAGGATATGCGTCAATGCAGACCTGAACTAAGACAGTGCCAGTGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CAA 90 bp AAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTCGGAGAGTGGGCACTaGCAGGTTTCAGGATCTTCA +
Preference number: 5 (lower is better)
Translates to: KILSEGHSPTPVGLITSASESGH*QVSGSS
Trigger: TGAAGATCCTGAAACCTGCAAGTGCCCACTCTCCGA...GGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp GTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGTCGGAGAGTGGGCACTaGCAGGTTTCAGGATCTTCA +
Preference number: 5 (lower is better)
Translates to: VTVILKILSEGHSPTPVGSESGH*QVSGSS
Trigger: TGAAGATCCTGAAACCTGCAAGTGCCCACTCTCCGA...CCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCGCTGGCCGGTATGGCTaGGCTAAATTCGGATTTGAT +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCAGRYG*AKFGFD
Trigger: ATCAAATCCGAATTTAGCCAAGCCATACCGGCCAGC...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CACCCCTCAACAAAGAGTCTGAAGTTAGCTTGTCTACCCCATGAAGGGCCTGGGTCTCAAGCTCCTGTCTaGCAGTGTTTCCTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: HPSTKSLKLACLPHEGPGSQAPV*QCFLFH
Trigger: GTGGAAAAGGAAACACTGCAAGACAGGAGCTTGAGA...CCCAGGCCCTTCATGGGGTAGACAAGCTAACTTCAGACTCTTTGTTGAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS CCA 90 bp TCTTTTGCTGTTTCCATTAACCTTAGAGAGCTTTTGATGACCAGCTaGGGACAGATTTGCCACCAGGCTTGCGATCACCATGCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: SFAVSINLRELLMTS*GQICHQACDHHACP
Trigger: GGGACAGGCATGGTGATCGCAAGCCTGGTGGCAAATCTGTCCCCAGCTGGTCATCAAAAGCTCTCTAAGGTTAATGGAAACAGCAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS CCA 90 bp ATAAATGAAGCCTCGAGAGGCAGAGTTTACAAGCCTCCTCCACCCTaGAAGCTAGAATTCACCACTGAGCTCCACTGTCAGAGTTGCTCA +
Preference number: 5 (lower is better)
Translates to: INEASRGRVYKPPPP*KLEFTTELHCQSCS
Trigger: TGAGCAACTCTGACAGTGGAGCTCAGTGGTGAATTCTAGCTTCCAGGGTGGAGGAGGCTTGTAAACTCTGCCTCTCGAGGCTTCATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481097.1
CDS-3UTR CAA 90 bp CTTCAGCCTGTGCTTTGGAGAACTACCTCTCTAGAGCATATACCTAAGCATGCCTCGACAGCCTGTAGTTaGGGACCTGGGGTATTGAAG +
Preference number: 5 (lower is better)
Translates to: LQPVLWRTTSLEHIPKHASTACS*GPGVLK
Trigger: CTTCAATACCCCAGGTCCCAAACTACAGGCTGTCGA...GGCATGCTTAGGTATATGCTCTAGAGAGGTAGTTCTCCAAAGCACAGGCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CAA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTTCGACAGCCTGTAGTTaGGGACCTGGGGTATTGAAG +
Preference number: 5 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFSTACS*GPGVLK
Trigger: CTTCAATACCCCAGGTCCCAAACTACAGGCTGTCGA...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp AAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCACAGCTTCAAGGCATTaGATAGGCAAGGACTCTCGG +
Preference number: 5 (lower is better)
Translates to: KILSEGHSPTPVGLITSATASRH*IGKDSR
Trigger: CCGAGAGTCCTTGCCTATCAAATGCCTTGAAGCTGT...GGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp GTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGACGTACAGCCCAATCTaGACCTTCTTGACTGTGTGC +
Preference number: 5 (lower is better)
Translates to: VTVILKILSEGHSPTPVGTYSPI*TFLTVC
Trigger: GCACACAGTCAAGAAGGTCAAGATTGGGCTGTACGT...CCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp ATAACATCTGTTGACTACCAGACTTCACTGAAATCGGCCGTCTGCTCTCCTGAGAGCATCTTTGAGACGTaGAGGACCAGCTGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: ITSVDYQTSLKSAVCSPESIFET*RTSCFH
Trigger: GTGGAAGCAGCTGGTCCTCAACGTCTCAAAGATGCT...CTCAGGAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGTCAACAGATGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp ATCAAGCCAGTTGGCAGTTCTAAGGCTTCTTTATCAGCATATTACAGAGTTTGTAGCACCCCGCCGTCTTaGTCCTCCTCCTCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: IKPVGSSKASLSAYYRVCSTPPS*SSSSEP
Trigger: GGGCTCAGAGGAGGAGGACAAAGACGGCGGGGTGCT...ACAAACTCTGTAATATGCTGATAAAGAAGCCTTAGAACTGCCAACTGGCTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp ATAACATCTGTTGACTACCAGACTTCACTGAAATCGGCCGTCTGCTCTCCTGAGTTGGGACCTGGGGTATaGAAGGCTTTGCCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: ITSVDYQTSLKSAVCSPELGPGV*KALPRR
Trigger: CCTTCTTGGCAAAGCCTTCAATACCCCAGGTCCCAA...CTCAGGAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGTCAACAGATGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCAGGCTGCGAATGGGTTaGCTGTGTGTAGATAAACAG +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCRLRMG*LCVDKQ
Trigger: CTGTTTATCTACACACAGCAAACCCATTCGCAGCCT...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CAGCAGCGTGAACTGAAGCTCTCCACCTTCCTGCACTTTTCTGAAATGTCAGAAAACTCCTGCGTCTGGTaGGCCTGCAAGTCCTATACA +
Preference number: 5 (lower is better)
Translates to: QQRELKLSTFLHFSEMSENSCVW*ACKSYT
Trigger: TGTATAGGACTTGCAGGCCAACCAGACGCAGGAGTT...TTCTGACATTTCAGAAAAGTGCAGGAAGGTGGAGAGCTTCAGTTCACGCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS CCA 90 bp AGCCCCCTGTGCACTGTGCCACATGGTTCCAGCATGGCAAGAGGCTaGGTGACACAGCATGCTGCTATTATTAAGAAAAGCAGTATTTTT +
Preference number: 5 (lower is better)
Translates to: SPLCTVPHGSSMARG*VTQHAAIIKKSSIF
Trigger: AAAAATACTGCTTTTCTTAATAATAGCAGCATGCTGTGTCACCCAGCCTCTTGCCATGCTGGAACCATGTGGCACAGTGCACAGGGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS CCA 90 bp CATCTCCCTCCCTCGGTAAAGATATCCTTAGCCACCAAACCCAAATaGCTCACTGGCTTCTCTCCAAGGCAAAAAGAGAGTTTCACTCCT +
Preference number: 5 (lower is better)
Translates to: HLPPSVKISLATKPK*LTGFSPRQKESFTP
Trigger: AGGAGTGAAACTCTCTTTTTGCCTTGGAGAGAAGCCAGTGAGCCATTTGGGTTTGGTGGCTAAGGATATCTTTACCGAGGGAGGGAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493155.1
CDS-3UTR CAA 90 bp GCCAGAAATGTGGAGTCACTGCCTTTCTCCAATAACTCCTCCCATCTAAGCAGTACAGCTTCAAGGCATTaGATAGGCAAGGACTCTCGG +
Preference number: 5 (lower is better)
Translates to: ARNVESLPFSNNSSHLSSTASRH*IGKDSR
Trigger: CCGAGAGTCCTTGCCTATCAAATGCCTTGAAGCTGT...ACTGCTTAGATGGGAGGAGTTATTGGAGAAAGGCAGTGACTCCACATTTCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCCAATCTTGACCTTCTaGACTGTGTGCAGGTATTTC +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCPILTF*TVCRYF
Trigger: GAAATACCTGCACACAGTCAAGAAGGTCAAGATTGG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp GGACTGAATTACACTATAAGGTGTAACACTGGACCGAAGACTTTTCCATTAAAAGGTGCCTCGGGACGGTaGGCTTCATGGCTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: GLNYTIRCNTGPKTFPLKGASGR*ASWLQS
Trigger: GCTCTGCAGCCATGAAGCCAACCGTCCCGAGGCACC...TTTTAATGGAAAAGTCTTCGGTCCAGTGTTACACCTTATAGTGTAATTCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCTCGGGTCATTTCTTTaGCTGTTTCCATTAACCCAC +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCLGSFL*LFPLTH
Trigger: GTGGGTTAATGGAAACAGCAAAAGAAATGACCCGAG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp GTCTGCAGCCAGAGGTTACACTGTAACTACCATATGCAGGCCAGACATTCATTCGCTGGCCGGTATGGCTaGGCTAAATTCGGATTTGAT +
Preference number: 5 (lower is better)
Translates to: VCSQRLHCNYHMQARHSFAGRYG*AKFGFD
Trigger: ATCAAATCCGAATTTAGCCAAGCCATACCGGCCAGC...GAATGAATGTCTGGCCTGCATATGGTAGTTACAGTGTAACCTCTGGCTGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTGCTGGCCGGTATGGCTaGGCTAAATTCGGATTTGAT +
Preference number: 5 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFAGRYG*AKFGFD
Trigger: ATCAAATCCGAATTTAGCCAAGCCATACCGGCCAGC...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp GTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGGAACCATCAAGCCAGTaGGCAGTTCTAAGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: VTVILKILSEGHSPTPVGEPSSQ*AVLRLL
Trigger: AAGAAGCCTTAGAACTGCCAACTGGCTTGATGGTTC...CCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CAAGCCAGAAATGTGGAGTCACTGCCTTTCTCCAATAACTCCTCCCATCTAAGCCCTGTGAGCTCCACATaGCAAATACCTCATTCCGAC +
Preference number: 5 (lower is better)
Translates to: QARNVESLPFSNNSSHLSPVSST*QIPHSD
Trigger: GTCGGAATGAGGTATTTGCAATGTGGAGCTCACAGG...GCTTAGATGGGAGGAGTTATTGGAGAAAGGCAGTGACTCCACATTTCTGGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS GCA 90 bp TATGGCTTGGCTAAATTCGGATTTGATAGCCCACTTCATTCAGAGTaGTCAGATCAGCCACCTTCTTTTCAGGCAGTGCAGGCGACTTCT +
Preference number: 5 (lower is better)
Translates to: YGLAKFGFDSPLHSE*SDQPPSFQAVQATS
Trigger: AGAAGTCGCCTGCACTGCCTGAAAAGAAGGTGGCTGATCTGAGCACTCTGAATGAAGTGGGCTATCAAATCCGAATTTAGCCAAGCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000517399.3
CDS CCA 90 bp TCCCTCGGTAAAGATATCCTTAGCCACCAAACCCAAATGGCTCACTaGCTTCTCTCCAAGGCAAAAAGAGAGTTTCACTCCTCATCCTCT +
Preference number: 5 (lower is better)
Translates to: SLGKDILSHQTQMAH*LLSKAKREFHSSSS
Trigger: AGAGGATGAGGAGTGAAACTCTCTTTTTGCCTTGGAGAGAAGCCAGTGAGCCATTTGGGTTTGGTGGCTAAGGATATCTTTACCGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493155.1
CDS-3UTR CAA 90 bp TATAAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAGAAGGCTCGGGACGGTaGGCTTCATGGCTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: YKTSVTVILKILSEGHSPEGSGR*ASWLQS
Trigger: GCTCTGCAGCCATGAAGCCAACCGTCCCGAGCCTTC...TGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366967.6
CDS-3UTR CAA 90 bp AAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCCCAATCTTGACCTTCTaGACTGTGTGCAGGTATTTC +
Preference number: 5 (lower is better)
Translates to: KILSEGHSPTPVGLITSAPILTF*TVCRYF
Trigger: GAAATACCTGCACACAGTCAAGAAGGTCAAGATTGG...GGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp TATAAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCATCCCCGGCTTCTCACTaGGGTCGGAGAGTGGGCACT +
Preference number: 5 (lower is better)
Translates to: YKTSVTVILKILSEGHSPSPASH*GRRVGT
Trigger: AGTGCCCACTCTCCGACCCAAGTGAGAAGCCGGGGA...TGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCATGGGGAAGCCGCTCTaGTTGACGTGGAACAGCACC +
Preference number: 5 (lower is better)
Translates to: KTSVTVILKILSEGHSPTMGKPL*LTWNST
Trigger: GGTGCTGTTCCACGTCAACAAGAGCGGCTTCCCCAT...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCGGGGTATTGAAGGCTTaGCCAAGAAGGCGGCGTTCC +
Preference number: 5 (lower is better)
Translates to: KTSVTVILKILSEGHSPTGVLKA*PRRRRS
Trigger: GGAACGCCGCCTTCTTGGCAAAGCCTTCAATACCCC...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCTGGCTAAATTCGGATTaGATAGCCCACTTCATTCAG +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCWLNSD*IAHFIQ
Trigger: CTGAATGAAGTGGGCTATCAAATCCGAATTTAGCCA...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCGTTATCCTTAAGATCTaGAGTGAGGGACATAGTCCA +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCVILKI*SEGHSP
Trigger: TGGACTATGTCCCTCACTCAAGATCTTAAGGATAAC...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp GTCTGCAGCCAGAGGTTACACTGTAACTACCATATGCAGGCCAGACATTCATTCAGGCTGCGAATGGGTTaGCTGTGTGTAGATAAACAG +
Preference number: 5 (lower is better)
Translates to: VCSQRLHCNYHMQARHSFRLRMG*LCVDKQ
Trigger: CTGTTTATCTACACACAGCAAACCCATTCGCAGCCT...GAATGAATGTCTGGCCTGCATATGGTAGTTACAGTGTAACCTCTGGCTGCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTGAACCATCAAGCCAGTaGGCAGTTCTAAGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFEPSSQ*AVLRLL
Trigger: AAGAAGCCTTAGAACTGCCAACTGGCTTGATGGTTC...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp GAAGCTGTACTCTTGATATTTACACCATACAAGACTAGGCTGTTAGGGTTGTCCCGAAAAGTCAATGGCTaGTCCATCAGCTCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: EAVLLIFTPYKTRLLGLSRKVNG*SISSAL
Trigger: CAGGGCTGAGCTGATGGACAAGCCATTGACTTTTCG...GGACAACCCTAACAGCCTAGTCTTGTATGGTGTAAATATCAAGAGTACAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp AGCCAGAGGAGATGCACTGAGACTGAAATAACATCTGTTGACTACCAGACTTCAACGTACAGCCCAATCTaGACCTTCTTGACTGTGTGC +
Preference number: 5 (lower is better)
Translates to: SQRRCTETEITSVDYQTSTYSPI*TFLTVC
Trigger: GCACACAGTCAAGAAGGTCAAGATTGGGCTGTACGT...TGAAGTCTGGTAGTCAACAGATGTTATTTCAGTCTCAGTGCATCTCCTCTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp TGGTTACCACCCACTCAGATTCTATTTCCAGGTGAATCCTTAAAAATAAAATTCTCCCCGGCTTCTCACTaGGGTCGGAGAGTGGGCACT +
Preference number: 5 (lower is better)
Translates to: WLPPTQILFPGESLKIKFSPASH*GRRVGT
Trigger: AGTGCCCACTCTCCGACCCAAGTGAGAAGCCGGGGA...GAATTTTATTTTTAAGGATTCACCTGGAAATAGAATCTGAGTGGGTGGTAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp GGACTGAATTACACTATAAGGTGTAACACTGGACCGAAGACTTTTCCATTAAAACCCTTAGGGTGCACCTaGGCCACGTGCATCCACATG +
Preference number: 5 (lower is better)
Translates to: GLNYTIRCNTGPKTFPLKPLGCT*ATCIHM
Trigger: CATGTGGATGCACGTGGCCAAGGTGCACCCTAAGGG...TTTTAATGGAAAAGTCTTCGGTCCAGTGTTACACCTTATAGTGTAATTCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp GCCAGAAATGTGGAGTCACTGCCTTTCTCCAATAACTCCTCCCATCTAAGCAGTCTCGGGTCATTTCTTTaGCTGTTTCCATTAACCCAC +
Preference number: 5 (lower is better)
Translates to: ARNVESLPFSNNSSHLSSLGSFL*LFPLTH
Trigger: GTGGGTTAATGGAAACAGCAAAAGAAATGACCCGAG...ACTGCTTAGATGGGAGGAGTTATTGGAGAAAGGCAGTGACTCCACATTTCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CAA 90 bp TCCAAACTTGTGGAGATCCCCATGGGAAATACTGGGGAAAGAATACAAATAGAAACTAGGCTGTTAGGGTaGTCCTGTGTGGTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SKLVEIPMGNTGERIQIETRLLG*SCVVCS
Trigger: GCTGCAGACCACACAGGACAACCCTAACAGCCTAGT...TTCTATTTGTATTCTTTCCCCAGTATTTCCCATGGGGATCTCCACAAGTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCCAACTCTTAGAATGGTaGCAGTGTTATAAGAGGTCT +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCQLLEW*QCYKRS
Trigger: AGACCTCTTATAACACTGCAACCATTCTAAGAGTTG...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp GTCTGCAGCCAGAGGTTACACTGTAACTACCATATGCAGGCCAGACATTCATTCCTAGAATTTAGGGGTTaGGTGCCTCTCCCGTATTTT +
Preference number: 5 (lower is better)
Translates to: VCSQRLHCNYHMQARHSFLEFRG*VPLPYF
Trigger: AAAATACGGGAGAGGCACCAAACCCCTAAATTCTAG...GAATGAATGTCTGGCCTGCATATGGTAGTTACAGTGTAACCTCTGGCTGCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CTTCAGCCTGTGCTTTGGAGAACTACCTCTCTAGAGCATATACCTAAGCATGCCGACTTCGGAGCATCTTaGCTCTTCTATCTGATTGTG +
Preference number: 5 (lower is better)
Translates to: LQPVLWRTTSLEHIPKHADFGAS*LFYLIV
Trigger: CACAATCAGATAGAAGAGCAAAGATGCTCCGAAGTC...GGCATGCTTAGGTATATGCTCTAGAGAGGTAGTTCTCCAAAGCACAGGCTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS TCA 90 bp CAGAGTGAAGATGACAAGTCCACAAGTGCTAAACATAGCCAGGCCTaGAGTCAGCATAATCCTTTTCTCTTAGTGACTGCACAAGCCCTT +
Preference number: 5 (lower is better)
Translates to: QSEDDKSTSAKHSQA*SQHNPFLLVTAQAL
Trigger: AAGGGCTTGTGCAGTCACTAAGAGAAAAGGATTATGCTGACTTCAGGCCTGGCTATGTTTAGCACTTGTGGACTTGTCATCTTCACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS-3UTR CAA 90 bp GGACTGAATTACACTATAAGGTGTAACACTGGACCGAAGACTTTTCCATTAAAAATGGGGAAGCCGCTCTaGTTGACGTGGAACAGCACC +
Preference number: 5 (lower is better)
Translates to: GLNYTIRCNTGPKTFPLKMGKPL*LTWNST
Trigger: GGTGCTGTTCCACGTCAACAAGAGCGGCTTCCCCAT...TTTTAATGGAAAAGTCTTCGGTCCAGTGTTACACCTTATAGTGTAATTCAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp TCCAAACTTGTGGAGATCCCCATGGGAAATACTGGGGAAAGAATACAAATAGAATTGGGACCTGGGGTATaGAAGGCTTTGCCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: SKLVEIPMGNTGERIQIELGPGV*KALPRR
Trigger: CCTTCTTGGCAAAGCCTTCAATACCCCAGGTCCCAA...TTCTATTTGTATTCTTTCCCCAGTATTTCCCATGGGGATCTCCACAAGTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp ATAACATCTGTTGACTACCAGACTTCACTGAAATCGGCCGTCTGCTCTCCTGAGTGGCTAAATTCGGATTaGATAGCCCACTTCATTCAG +
Preference number: 5 (lower is better)
Translates to: ITSVDYQTSLKSAVCSPEWLNSD*IAHFIQ
Trigger: CTGAATGAAGTGGGCTATCAAATCCGAATTTAGCCA...CTCAGGAGAGCAGACGGCCGATTTCAGTGAAGTCTGGTAGTCAACAGATGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp CTCCTGAAGATGCTGGGTAAAGTGCAGAGAGAAGCACCACAGAAACCCTCTTGCAAAATGGTTCTTGTATaGCCAGAAGAATTTCAGTGC +
Preference number: 5 (lower is better)
Translates to: LLKMLGKVQREAPQKPSCKMVLV*PEEFQC
Trigger: GCACTGAAATTCTTCTGGCAATACAAGAACCATTTT...GCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCACTTTACCCAGCATCTTCAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp AAGATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCATAGTACGTGACCTCTaGTGCTTTTTGTTAGAGTCT +
Preference number: 5 (lower is better)
Translates to: KILSEGHSPTPVGLITSAIVRDL*CFLLES
Trigger: AGACTCTAACAAAAAGCACAAGAGGTCACGTACTAT...GGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp AGCCAGAGGAGATGCACTGAGACTGAAATAACATCTGTTGACTACCAGACTTCAGAGTCCTCCCTTAGTTaGATTCTTGGCATCCTTCAG +
Preference number: 5 (lower is better)
Translates to: SQRRCTETEITSVDYQTSESSLS*ILGILQ
Trigger: CTGAAGGATGCCAAGAATCAAACTAAGGGAGGACTC...TGAAGTCTGGTAGTCAACAGATGTTATTTCAGTCTCAGTGCATCTCCTCTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp GAAGCTGTACTCTTGATATTTACACCATACAAGACTAGGCTGTTAGGGTTGTCCTGCTTTGAAGTCCTTTaGCTTTCCCTGTCACCCCCA +
Preference number: 5 (lower is better)
Translates to: EAVLLIFTPYKTRLLGLSCFEVL*LSLSPP
Trigger: TGGGGGTGACAGGGAAAGCAAAAGGACTTCAAAGCA...GGACAACCCTAACAGCCTAGTCTTGTATGGTGTAAATATCAAGAGTACAGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp TCCAAACTTGTGGAGATCCCCATGGGAAATACTGGGGAAAGAATACAAATAGAAACAGCTTCAAGGCATTaGATAGGCAAGGACTCTCGG +
Preference number: 5 (lower is better)
Translates to: SKLVEIPMGNTGERIQIETASRH*IGKDSR
Trigger: CCGAGAGTCCTTGCCTATCAAATGCCTTGAAGCTGT...TTCTATTTGTATTCTTTCCCCAGTATTTCCCATGGGGATCTCCACAAGTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366968.8
CDS-3UTR CAA 90 bp GGACTGAATTACACTATAAGGTGTAACACTGGACCGAAGACTTTTCCATTAAAAACTAGGCTGTTAGGGTaGTCCTGTGTGGTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GLNYTIRCNTGPKTFPLKTRLLG*SCVVCS
Trigger: GCTGCAGACCACACAGGACAACCCTAACAGCCTAGT...TTTTAATGGAAAAGTCTTCGGTCCAGTGTTACACCTTATAGTGTAATTCAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTCAACTCTTAGAATGGTaGCAGTGTTATAAGAGGTCT +
Preference number: 5 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFQLLEW*QCYKRS
Trigger: AGACCTCTTATAACACTGCAACCATTCTAAGAGTTG...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp ACCTTCACTGGCACTGTCTTAGTTCAGGTCTGCATTGACGCATATCCTTTCTCTTCTTTCATGGGCTCTTaGTGCCAAACTAGACCAAAA +
Preference number: 5 (lower is better)
Translates to: TFTGTVLVQVCIDAYPFSSFMGS*CQTRPK
Trigger: TTTTGGTCTAGTTTGGCACAAAGAGCCCATGAAAGA...AGAGAAAGGATATGCGTCAATGCAGACCTGAACTAAGACAGTGCCAGTGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS-3UTR CAA 90 bp TATAAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCATCGGAGAGTGGGCACTaGCAGGTTTCAGGATCTTCA +
Preference number: 5 (lower is better)
Translates to: YKTSVTVILKILSEGHSPSESGH*QVSGSS
Trigger: TGAAGATCCTGAAACCTGCAAGTGCCCACTCTCCGA...TGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp AGCCAGAGGAGATGCACTGAGACTGAAATAACATCTGTTGACTACCAGACTTCATGGCTAAATTCGGATTaGATAGCCCACTTCATTCAG +
Preference number: 5 (lower is better)
Translates to: SQRRCTETEITSVDYQTSWLNSD*IAHFIQ
Trigger: CTGAATGAAGTGGGCTATCAAATCCGAATTTAGCCA...TGAAGTCTGGTAGTCAACAGATGTTATTTCAGTCTCAGTGCATCTCCTCTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp AGCCAGAGGAGATGCACTGAGACTGAAATAACATCTGTTGACTACCAGACTTCAGTTATCCTTAAGATCTaGAGTGAGGGACATAGTCCA +
Preference number: 5 (lower is better)
Translates to: SQRRCTETEITSVDYQTSVILKI*SEGHSP
Trigger: TGGACTATGTCCCTCACTCAAGATCTTAAGGATAAC...TGAAGTCTGGTAGTCAACAGATGTTATTTCAGTCTCAGTGCATCTCCTCTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp ATCTTGAGTGAGGGACATAGTCCAACCCCAGTGGGGCTTATTACTTCAGCCTTTAAAATGGTTCTTGTATaGCCAGAAGAATTTCAGTGC +
Preference number: 5 (lower is better)
Translates to: ILSEGHSPTPVGLITSAFKMVLV*PEEFQC
Trigger: GCACTGAAATTCTTCTGGCAATACAAGAACCATTTT...AAAGGCTGAAGTAATAAGCCCCACTGGGGTTGGACTATGTCCCTCACTCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp AAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAACCGAGTCCTCCCTTAGTTaGATTCTTGGCATCCTTCAG +
Preference number: 5 (lower is better)
Translates to: KTSVTVILKILSEGHSPTESSLS*ILGILQ
Trigger: CTGAAGGATGCCAAGAATCAAACTAAGGGAGGACTC...GGTTGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp GAAGCTGTACTCTTGATATTTACACCATACAAGACTAGGCTGTTAGGGTTGTCCCTAGAATTTAGGGGTTaGGTGCCTCTCCCGTATTTT +
Preference number: 5 (lower is better)
Translates to: EAVLLIFTPYKTRLLGLSLEFRG*VPLPYF
Trigger: AAAATACGGGAGAGGCACCAAACCCCTAAATTCTAG...GGACAACCCTAACAGCCTAGTCTTGTATGGTGTAAATATCAAGAGTACAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp TGGTTACCACCCACTCAGATTCTATTTCCAGGTGAATCCTTAAAAATAAAATTCCGAAAAGTCAATGGCTaGTCCATCAGCTCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: WLPPTQILFPGESLKIKFRKVNG*SISSAL
Trigger: CAGGGCTGAGCTGATGGACAAGCCATTGACTTTTCG...GAATTTTATTTTTAAGGATTCACCTGGAAATAGAATCTGAGTGGGTGGTAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp TCCAAACTTGTGGAGATCCCCATGGGAAATACTGGGGAAAGAATACAAATAGAACTCGGGTCATTTCTTTaGCTGTTTCCATTAACCCAC +
Preference number: 5 (lower is better)
Translates to: SKLVEIPMGNTGERIQIELGSFL*LFPLTH
Trigger: GTGGGTTAATGGAAACAGCAAAAGAAATGACCCGAG...TTCTATTTGTATTCTTTCCCCAGTATTTCCCATGGGGATCTCCACAAGTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366968.8
CDS-3UTR CAA 90 bp TATAAAACTTCAGTTACGGTTATCCTTAAGATCTTGAGTGAGGGACATAGTCCAGCTGGCCGGTATGGCTaGGCTAAATTCGGATTTGAT +
Preference number: 5 (lower is better)
Translates to: YKTSVTVILKILSEGHSPAGRYG*AKFGFD
Trigger: ATCAAATCCGAATTTAGCCAAGCCATACCGGCCAGC...TGGACTATGTCCCTCACTCAAGATCTTAAGGATAACCGTAACTGAAGTTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp AGCCAGAGGAGATGCACTGAGACTGAAATAACATCTGTTGACTACCAGACTTCAGACCTCTTGTGCTTTTaGTTAGAGTCTGCAAAGTTT +
Preference number: 5 (lower is better)
Translates to: SQRRCTETEITSVDYQTSDLLCF*LESAKF
Trigger: AAACTTTGCAGACTCTAACAAAAAGCACAAGAGGTC...TGAAGTCTGGTAGTCAACAGATGTTATTTCAGTCTCAGTGCATCTCCTCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp GGACTGAATTACACTATAAGGTGTAACACTGGACCGAAGACTTTTCCATTAAAATGCTTTGAAGTCCTTTaGCTTTCCCTGTCACCCCCA +
Preference number: 5 (lower is better)
Translates to: GLNYTIRCNTGPKTFPLKCFEVL*LSLSPP
Trigger: TGGGGGTGACAGGGAAAGCAAAAGGACTTCAAAGCA...TTTTAATGGAAAAGTCTTCGGTCCAGTGTTACACCTTATAGTGTAATTCAGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp GGACTGAATTACACTATAAGGTGTAACACTGGACCGAAGACTTTTCCATTAAAACCAATCTTGACCTTCTaGACTGTGTGCAGGTATTTC +
Preference number: 5 (lower is better)
Translates to: GLNYTIRCNTGPKTFPLKPILTF*TVCRYF
Trigger: GAAATACCTGCACACAGTCAAGAAGGTCAAGATTGG...TTTTAATGGAAAAGTCTTCGGTCCAGTGTTACACCTTATAGTGTAATTCAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp ATCAAGCCAGTTGGCAGTTCTAAGGCTTCTTTATCAGCATATTACAGAGTTTGTTTCTTTTCCTCCTTGTaGTGGGAAACAAGCTATGCA +
Preference number: 5 (lower is better)
Translates to: IKPVGSSKASLSAYYRVCFFSSL*WETSYA
Trigger: TGCATAGCTTGTTTCCCACAACAAGGAGGAAAAGAA...ACAAACTCTGTAATATGCTGATAAAGAAGCCTTAGAACTGCCAACTGGCTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp TGGTTACCACCCACTCAGATTCTATTTCCAGGTGAATCCTTAAAAATAAAATTCCCAATCTTGACCTTCTaGACTGTGTGCAGGTATTTC +
Preference number: 5 (lower is better)
Translates to: WLPPTQILFPGESLKIKFPILTF*TVCRYF
Trigger: GAAATACCTGCACACAGTCAAGAAGGTCAAGATTGG...GAATTTTATTTTTAAGGATTCACCTGGAAATAGAATCTGAGTGGGTGGTAACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366965.6
ENST00000366967.6
ENST00000366968.8
CDS-3UTR CAA 90 bp TGGTTACCACCCACTCAGATTCTATTTCCAGGTGAATCCTTAAAAATAAAATTCTTCTTTTCCTCCTTGTaGTGGGAAACAAGCTATGCA +
Preference number: 5 (lower is better)
Translates to: WLPPTQILFPGESLKIKFFFSSL*WETSYA
Trigger: TGCATAGCTTGTTTCCCACAACAAGGAGGAAAAGAA...GAATTTTATTTTTAAGGATTCACCTGGAAATAGAATCTGAGTGGGTGGTAACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS-3UTR CAA 90 bp GGGAAACAAGCTATGCAACCATTTGACATTCTGTATTTTAGATGTAACAGTACTATAGTACGTGACCTCTaGTGCTTTTTGTTAGAGTCT +
Preference number: 5 (lower is better)
Translates to: GKQAMQPFDILYFRCNSTIVRDL*CFLLES
Trigger: AGACTCTAACAAAAAGCACAAGAGGTCACGTACTAT...AGTACTGTTACATCTAAAATACAGAATGTCAAATGGTTGCATAGCTTGTTTCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366965.6
ENST00000366968.8
CDS GCA 72 bp CCCCGCTGGTGGCGAGGCTCACGGGCCGCGCGTGGCTaGTCCGGGACCGGGTGCCTTTGGCGCCAAGGGGGA +
Preference number: 6 (lower is better)
Translates to: PRWWRGSRAARG*SGTGCLWRQGG
Trigger: TCCCCCTTGGCGCCAAAGGCACCCGGTCCCGGAGCAGCCACGCGCGGCCCGTGAGCCTCGCCACCAGCGGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366968.8
ENST00000490792.1
CDS CCA 72 bp GAGCCCCCGCTGGTGGCGAGGCTCACGGGCCGCGCGTaGCTGCTCCGGGACCGGGTGCCTTTGGCGCCAAGG +
Preference number: 6 (lower is better)
Translates to: EPPLVARLTGRA*LLRDRVPLAPR
Trigger: CCTTGGCGCCAAAGGCACCCGGTCCCGGAGCAGCCACGCGCGGCCCGTGAGCCTCGCCACCAGCGGGGGCTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366968.8
ENST00000490792.1
CDS GCA 72 bp GGCTCACGGGCCGCGCGTGGCTGCTCCGGGACCGGGTaGCTTTGGCGCCTTTGGGGTGGGGGCAGCGGTGAG +
Preference number: 6 (lower is better)
Translates to: GSRAARGCSGTG*LWRLWGGGSGE
Trigger: CTCACCGCTGCCCCCACCCCAAAGGCGCCAAAGGCACCCGGTCCCGGAGCAGCCACGCGCGGCCCGTGAGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000493155.1
ENST00000517399.3
CDS GCA 72 bp CCCCGCTGGTGGCGAGGCTCACGGGCCGCGCGTGGCTaGTCCGGGACCGGGTGCCTTTGGCGCCTTTGGGGT +
Preference number: 6 (lower is better)
Translates to: PRWWRGSRAARG*SGTGCLWRLWG
Trigger: ACCCCAAAGGCGCCAAAGGCACCCGGTCCCGGAGCAGCCACGCGCGGCCCGTGAGCCTCGCCACCAGCGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000493155.1
ENST00000517399.3
CDS CCA 72 bp GAGCCCCCGCTGGTGGCGAGGCTCACGGGCCGCGCGTaGCTGCTCCGGGACCGGGTGCCTTTGGCGCCTTTG +
Preference number: 6 (lower is better)
Translates to: EPPLVARLTGRA*LLRDRVPLAPL
Trigger: CAAAGGCGCCAAAGGCACCCGGTCCCGGAGCAGCCACGCGCGGCCCGTGAGCCTCGCCACCAGCGGGGGCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000493155.1
ENST00000517399.3
CDS CCA 72 bp CCCCGCCGTCTTTGTCCTCCTCCTCTGAGCCCCCGCTaGTGGCGAGGCTCACGGGCCGCGCGTGGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: PRRLCPPPLSPR*WRGSRAARGCS
Trigger: GGAGCAGCCACGCGCGGCCCGTGAGCCTCGCCACCAGCGGGGGCTCAGAGGAGGAGGACAAAGACGGCGGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000366968.8
ENST00000490792.1
ENST00000493155.1
ENST00000517399.3
CDS CCA 72 bp CGTGGCTGCTCCGGGACCGGGTGCCTTTGGCGCCTTTaGGGTGGGGGCAGCGGTGAGTGTCGGCCGCGGAGC +
Preference number: 6 (lower is better)
Translates to: RGCSGTGCLWRL*GGGSGECRPRS
Trigger: GCTCCGCGGCCGACACTCACCGCTGCCCCCACCCCAAAGGCGCCAAAGGCACCCGGTCCCGGAGCAGCCACG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000493155.1
ENST00000517399.3
CDS TCA 72 bp GTGGAACAGCACCCCGCCGTCTTTGTCCTCCTCCTCTaGGCCCCCGCTGGTGGCGAGGCTCACGGGCCGCGC +
Preference number: 6 (lower is better)
Translates to: VEQHPAVFVLLL*APAGGEAHGPR
Trigger: GCGCGGCCCGTGAGCCTCGCCACCAGCGGGGGCTCAGAGGAGGAGGACAAAGACGGCGGGGTGCTGTTCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000366968.8
ENST00000490792.1
ENST00000493155.1
ENST00000517399.3
CDS GCA 72 bp TTACCGGCGGTGCCTCGGGACGGTTGGCTTCATGGCTaGAGAGCCTCTCCGGGCGGCGGGAGAGCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: LPAVPRDGWLHG*RASPGGGRAGA
Trigger: AGCCCCTGCTCTCCCGCCGCCCGGAGAGGCTCTGCAGCCATGAAGCCAACCGTCCCGAGGCACCGCCGGTAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
ENST00000517399.3
CDS CCA 72 bp CTGCTTACCGGCGGTGCCTCGGGACGGTTGGCTTCATaGCTGCAGAGCCTCTCCGGGCGGCGGGAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: LLTGGASGRLAS*LQSLSGRRESR
Trigger: CCTGCTCTCCCGCCGCCCGGAGAGGCTCTGCAGCCATGAAGCCAACCGTCCCGAGGCACCGCCGGTAAGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
ENST00000517399.3
CDS GCA 72 bp GCCCTGCGATTACCTCGGGACGGTTGGCTTCATGGCTaGAGAGCCTCTCCGGGCGGCGGGAGAGCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: ALRLPRDGWLHG*RASPGGGRAGA
Trigger: AGCCCCTGCTCTCCCGCCGCCCGGAGAGGCTCTGCAGCCATGAAGCCAACCGTCCCGAGGTAATCGCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490792.1
CDS GCA 72 bp GGGGTATTGAAGGCTCGGGACGGTTGGCTTCATGGCTaGAGAGCCTCTCCGGGCGGCGGGAGAGCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: GVLKARDGWLHG*RASPGGGRAGA
Trigger: AGCCCCTGCTCTCCCGCCGCCCGGAGAGGCTCTGCAGCCATGAAGCCAACCGTCCCGAGCCTTCAATACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271776.4
ENST00000366967.6
CDS CCA 72 bp TCCAGCCCTGCGATTACCTCGGGACGGTTGGCTTCATaGCTGCAGAGCCTCTCCGGGCGGCGGGAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: SSPAITSGRLAS*LQSLSGRRESR
Trigger: CCTGCTCTCCCGCCGCCCGGAGAGGCTCTGCAGCCATGAAGCCAACCGTCCCGAGGTAATCGCAGGGCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490792.1
CDS GCA 72 bp GCGGGAGCTCCGCGGAGGCTCCCTGCTTACCGGCGGTaGCTGAAATCAGCGGAGACACAGCTGACACCACAG +
Preference number: 6 (lower is better)
Translates to: AGAPRRLPAYRR*LKSAETQLTPQ
Trigger: CTGTGGTGTCAGCTGTGTCTCCGCTGATTTCAGGCACCGCCGGTAAGCAGGGAGCCTCCGCGGAGCTCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490792.1
CDS CCA 72 bp ACCTGGGGTATTGAAGGCTCGGGACGGTTGGCTTCATaGCTGCAGAGCCTCTCCGGGCGGCGGGAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: TWGIEGSGRLAS*LQSLSGRRESR
Trigger: CCTGCTCTCCCGCCGCCCGGAGAGGCTCTGCAGCCATGAAGCCAACCGTCCCGAGCCTTCAATACCCCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271776.4
ENST00000366967.6
CDS TCA 72 bp GACACCACAGCTAAGTGGACGCACAGCGGAACCGAGTaGGGGGTCCCGGAGTGTCTCCACGACACTCCCCGC +
Preference number: 6 (lower is better)
Translates to: DTTAKWTHSGTE*GVPECLHDTPR
Trigger: GCGGGGAGTGTCGTGGAGACACTCCGGGACCCCTCACTCGGTTCCGCTGTGCGTCCACTTAGCTGTGGTGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490792.1
CDS CAA 72 bp CGCTCCCAGGTGTGGCTGTCGATGGGGAAGCCGCTCTaGTTGACGTGGAACAGCACCCCGCCGTCTTTGTCC +
Preference number: 6 (lower is better)
Translates to: RSQVWLSMGKPL*LTWNSTPPSLS
Trigger: GGACAAAGACGGCGGGGTGCTGTTCCACGTCAACAAGAGCGGCTTCCCCATCGACAGCCACACCTGGGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
ENST00000490792.1
ENST00000493155.1
ENST00000517399.3
CDS CAA 90 bp CACATGCGCTCCCAGGTGTGGCTGTCGATGGGGAAGCCGCTCTTGTaGACGTGGAACAGCACCCCGCCGTCTTTGTCCTCCTCCTCTGAG +
Preference number: 6 (lower is better)
Translates to: HMRSQVWLSMGKPLL*TWNSTPPSLSSSSE
Trigger: CTCAGAGGAGGAGGACAAAGACGGCGGGGTGCTGTTCCACGTCAACAAGAGCGGCTTCCCCATCGACAGCCACACCTGGGAGCGCATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
ENST00000490792.1
ENST00000493155.1
ENST00000517399.3
CDS TCA 72 bp CCCAGGTGTGGCTGTCGATGGGGAAGCCGCTCTTGTTaGCGTGGAACAGCACCCCGCCGTCTTTGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: PRCGCRWGSRSC*RGTAPRRLCPP
Trigger: AGGAGGACAAAGACGGCGGGGTGCTGTTCCACGTCAACAAGAGCGGCTTCCCCATCGACAGCCACACCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
ENST00000490792.1
ENST00000493155.1
ENST00000517399.3
CDS CAA 72 bp TCCCAGGTGTGGCTGTCGATGGGGAAGCCGCTCTTGTaGACGTGGAACAGCACCCCGCCGTCTTTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: SQVWLSMGKPLL*TWNSTPPSLSS
Trigger: GGAGGACAAAGACGGCGGGGTGCTGTTCCACGTCAACAAGAGCGGCTTCCCCATCGACAGCCACACCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
ENST00000490792.1
ENST00000493155.1
ENST00000517399.3
CDS CAA 90 bp ATCCACATGCGCTCCCAGGTGTGGCTGTCGATGGGGAAGCCGCTCTaGTTGACGTGGAACAGCACCCCGCCGTCTTTGTCCTCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: IHMRSQVWLSMGKPL*LTWNSTPPSLSSSS
Trigger: AGAGGAGGAGGACAAAGACGGCGGGGTGCTGTTCCACGTCAACAAGAGCGGCTTCCCCATCGACAGCCACACCTGGGAGCGCATGTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
ENST00000490792.1
ENST00000493155.1
ENST00000517399.3
CDS CCA 72 bp GTGTGGCTGTCGATGGGGAAGCCGCTCTTGTTGACGTaGAACAGCACCCCGCCGTCTTTGTCCTCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: VWLSMGKPLLLT*NSTPPSLSSSS
Trigger: AGAGGAGGAGGACAAAGACGGCGGGGTGCTGTTCCACGTCAACAAGAGCGGCTTCCCCATCGACAGCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
ENST00000490792.1
ENST00000493155.1
ENST00000517399.3
CDS CAA 90 bp GGATCGCCTGGAGCCAGTCTGGGATCGTCATCGACAGCCTGTAGTTaGGGACCTGGGGTATTGAAGGCTCGGGACGGTTGGCTTCATGGC +
Preference number: 6 (lower is better)
Translates to: GSPGASLGSSSTACS*GPGVLKARDGWLHG
Trigger: GCCATGAAGCCAACCGTCCCGAGCCTTCAATACCCCAGGTCCCAAACTACAGGCTGTCGATGACGATCCCAGACTGGCTCCAGGCGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271776.4
ENST00000366967.6
CDS GCA 72 bp TTGATGACCAGCTGGGGACAGATTTGCCACCAGGCTTaGGATCACCATGCCTGTCCCCTGGCTGGGTGTGCT +
Preference number: 6 (lower is better)
Translates to: LMTSWGQICHQA*DHHACPLAGCA
Trigger: AGCACACCCAGCCAGGGGACAGGCATGGTGATCGCAAGCCTGGTGGCAAATCTGTCCCCAGCTGGTCATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS CAA 72 bp GGAGCCAGTCTGGGATCGTCATCGACAGCCTGTAGTTaGGGACCTGGGGTATTGAAGGCTCGGGACGGTTGG +
Preference number: 6 (lower is better)
Translates to: GASLGSSSTACS*GPGVLKARDGW
Trigger: CCAACCGTCCCGAGCCTTCAATACCCCAGGTCCCAAACTACAGGCTGTCGATGACGATCCCAGACTGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271776.4
ENST00000366967.6
CDS CAA 72 bp TTTGATGACCAGCTGGGGACAGATTTGCCACCAGGCTaGCGATCACCATGCCTGTCCCCTGGCTGGGTGTGC +
Preference number: 6 (lower is better)
Translates to: FDDQLGTDLPPG*RSPCLSPGWVC
Trigger: GCACACCCAGCCAGGGGACAGGCATGGTGATCGCAAGCCTGGTGGCAAATCTGTCCCCAGCTGGTCATCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS CAA 90 bp GGATCGCCTGGAGCCAGTCTGGGATCGTCATCGACAGCCTGTAGTTaGGGACCTGGGGTATTGAAGGCTTTGCCAAGAAGGCGGCGTTCC +
Preference number: 6 (lower is better)
Translates to: GSPGASLGSSSTACS*GPGVLKALPRRRRS
Trigger: GGAACGCCGCCTTCTTGGCAAAGCCTTCAATACCCCAGGTCCCAAACTACAGGCTGTCGATGACGATCCCAGACTGGCTCCAGGCGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
ENST00000517399.3
CDS GCA 72 bp GGCTTGCGATCACCATGCCTGTCCCCTGGCTGGGTGTaGTCAGACCTTGGTTGGAAGGATACTGTAGGGTCT +
Preference number: 6 (lower is better)
Translates to: GLRSPCLSPGWV*SDLGWKDTVGS
Trigger: AGACCCTACAGTATCCTTCCAACCAAGGTCTGAGCACACCCAGCCAGGGGACAGGCATGGTGATCGCAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS GCA 72 bp CTCCCTGTGCCGTGTAGAGAGAGGAACACAGCCCAATaGCTCAGTCTCCCCGGGGCTGTGTTTGTTTGCTTG +
Preference number: 6 (lower is better)
Translates to: LPVPCRERNTAQ*LSLPGAVFVCL
Trigger: CAAGCAAACAAACACAGCCCCGGGGAGACTGAGGCATTGGGCTGTGTTCCTCTCTCTACACGGCACAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS CCA 72 bp GATGTGCCCAGCTGCACAGCTAACACGTGGCACAGTTaGGATTCAACCAAGCCCCCTGTGCACTGTGCCACA +
Preference number: 6 (lower is better)
Translates to: DVPSCTANTWHS*DSTKPPVHCAT
Trigger: TGTGGCACAGTGCACAGGGGGCTTGGTTGAATCCCAACTGTGCCACGTGTTAGCTGTGCAGCTGGGCACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS CCA 72 bp AGGAGGAAGGATGTGCCCAGCTGCACAGCTAACACGTaGCACAGTTGGGATTCAACCAAGCCCCCTGTGCAC +
Preference number: 6 (lower is better)
Translates to: RRKDVPSCTANT*HSWDSTKPPVH
Trigger: GTGCACAGGGGGCTTGGTTGAATCCCAACTGTGCCACGTGTTAGCTGTGCAGCTGGGCACATCCTTCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS CCA 72 bp CGCCTCCACCCCTTACAGACTAGGATACCTGAGCCATaGGCTACGGGAATAGAGGTTGGGAGAGGAAGCTGG +
Preference number: 6 (lower is better)
Translates to: RLHPLQTRIPEP*ATGIEVGRGSW
Trigger: CCAGCTTCCTCTCCCAACCTCTATTCCCGTAGCCCATGGCTCAGGTATCCTAGTCTGTAAGGGGTGGAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481097.1
CDS TCA 72 bp AGGACCAGCTGCTTCCACTCAATGGGCTGGAAGCTATaGGGCTCATGGGGGACGTACAGCCCAATCTTGACC +
Preference number: 6 (lower is better)
Translates to: RTSCFHSMGWKL*GSWGTYSPILT
Trigger: GGTCAAGATTGGGCTGTACGTCCCCCATGAGCCTCATAGCTTCCAGCCCATTGAGTGGAAGCAGCTGGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000271776.4
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000366969.2
ENST00000517399.3
CDS GCA 72 bp TCCGAAAAGTCAATGGCTTGTCCATCAGCTCAGCCCTaGGGCTCATGCCCAATGAGCCATAGCGGCCATTGC +
Preference number: 6 (lower is better)
Translates to: SEKSMACPSAQP*GSCPMSHSGHC
Trigger: GCAATGGCCGCTATGGCTCATTGGGCATGAGCCGCAGGGCTGAGCTGATGGACAAGCCATTGACTTTTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271776.4
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000366969.2
ENST00000517399.3
CDS CAA 72 bp ACACAGCCCAATGCCTCAGTCTCCCCGGGGCTGTGTTaGTTTGCTTGGCAAGTTCCTCTCCTCACGAAGGCA +
Preference number: 6 (lower is better)
Translates to: TQPNASVSPGLC*FAWQVPLLTKA
Trigger: TGCCTTCGTGAGGAGAGGAACTTGCCAAGCAAACAAACACAGCCCCGGGGAGACTGAGGCATTGGGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS TCA 72 bp CAAGCCTCCTCCACCCTGGAAGCTAGAATTCACCACTaGGCTCCACTGTCAGAGTTGCTCAGTCCTCAGTCC +
Preference number: 6 (lower is better)
Translates to: QASSTLEARIHH*APLSELLSPQS
Trigger: GGACTGAGGACTGAGCAACTCTGACAGTGGAGCTCAGTGGTGAATTCTAGCTTCCAGGGTGGAGGAGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481097.1
CDS GCA 72 bp CCCTGCGGCTCATGCCCAATGAGCCATAGCGGCCATTaGAGTAAATCCCCAGCACAACGTGGTGAAAGTAGT +
Preference number: 6 (lower is better)
Translates to: PCGSCPMSHSGH*SKSPAQRGESS
Trigger: ACTACTTTCACCACGTTGTGCTGGGGATTTACTGCAATGGCCGCTATGGCTCATTGGGCATGAGCCGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271776.4
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000366969.2
ENST00000517399.3
CDS GCA 72 bp TCAATGGCTTGTCCATCAGCTCAGCCCTGCGGCTCATaGCCAATGAGCCATAGCGGCCATTGCAGTAAATCC +
Preference number: 6 (lower is better)
Translates to: SMACPSAQPCGS*PMSHSGHCSKS
Trigger: GGATTTACTGCAATGGCCGCTATGGCTCATTGGGCATGAGCCGCAGGGCTGAGCTGATGGACAAGCCATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271776.4
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000366969.2
ENST00000517399.3
CDS GCA 72 bp AAGCTAGAATTCACCACTGAGCTCCACTGTCAGAGTTaGTCAGTCCTCAGTCCCACCTCCAACCTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: KLEFTTELHCQS*SVLSPTSNLAL
Trigger: CAGGGCCAGGTTGGAGGTGGGACTGAGGACTGAGCAACTCTGACAGTGGAGCTCAGTGGTGAATTCTAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481097.1
CDS CCA 72 bp GGAAGCTGGCAGCTCGAATGTAGGAGAGAGGTCATCTaGCCCATAGATCATGCACCACTTACCCACTCAGCG +
Preference number: 6 (lower is better)
Translates to: GSWQLECRREVI*PIDHAPLTHSA
Trigger: CGCTGAGTGGGTAAGTGGTGCATGATCTATGGGCCAGATGACCTCTCTCCTACATTCGAGCTGCCAGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481097.1
CDS CCA 72 bp GCCTCGAGAGGCAGAGTTTACAAGCCTCCTCCACCCTaGAAGCTAGAATTCACCACTGAGCTCCACTGTCAG +
Preference number: 6 (lower is better)
Translates to: ASRGRVYKPPPP*KLEFTTELHCQ
Trigger: CTGACAGTGGAGCTCAGTGGTGAATTCTAGCTTCCAGGGTGGAGGAGGCTTGTAAACTCTGCCTCTCGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481097.1
CDS CAA 72 bp TTCCCCGGCTTCTCACTTGGGTCGGAGAGTGGGCACTaGCAGGTTTCAGGATCTGAAGGAGATGTGAGGAGT +
Preference number: 6 (lower is better)
Translates to: FPGFSLGSESGH*QVSGSEGDVRS
Trigger: ACTCCTCACATCTCCTTCAGATCCTGAAACCTGCAAGTGCCCACTCTCCGACCCAAGTGAGAAGCCGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS CAA 72 bp GGAGCCAGTCTGGGATCGTCATCGACAGCCTGTAGTTaGGGACCTGGGGTATTGAAGGCTTTGCCAAGAAGG +
Preference number: 6 (lower is better)
Translates to: GASLGSSSTACS*GPGVLKALPRR
Trigger: CCTTCTTGGCAAAGCCTTCAATACCCCAGGTCCCAAACTACAGGCTGTCGATGACGATCCCAGACTGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366964.7
ENST00000366965.6
ENST00000366966.6
ENST00000366968.8
ENST00000517399.3
CDS TCA 72 bp CCTTCCTTATGTCAGCCCTCAGCATCTTTGAGACGTTaGGGACCAGCTGCTTCCACTCAATGGGCTGGAAGC +
Preference number: 6 (lower is better)
Translates to: PSLCQPSASLRR*GPAASTQWAGS
Trigger: GCTTCCAGCCCATTGAGTGGAAGCAGCTGGTCCTCAACGTCTCAAAGATGCTGAGGGCTGACATAAGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271776.4
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000517399.3
CDS CCA 72 bp GGTCTTCATGTAATTCTGGATCGCCTGGAGCCAGTCTaGGATCGTCATCGACAGCCTGTAGTTTGGGACCTG +
Preference number: 6 (lower is better)
Translates to: GLHVILDRLEPV*DRHRQPVVWDL
Trigger: CAGGTCCCAAACTACAGGCTGTCGATGACGATCCCAGACTGGCTCCAGGCGATCCAGAATTACATGAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271776.4
ENST00000366964.7
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000517399.3
CDS CCA 72 bp GTCAAAGATGAGGTCACTCAGAGTCCGAAAAGTCAATaGCTTGTCCATCAGCTCAGCCCTGCGGCTCATGCC +
Preference number: 6 (lower is better)
Translates to: VKDEVTQSPKSQ*LVHQLSPAAHA
Trigger: GGCATGAGCCGCAGGGCTGAGCTGATGGACAAGCCATTGACTTTTCGGACTCTGAGTGACCTCATCTTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271776.4
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000366969.2
ENST00000517399.3
CDS CAA 90 bp AGCAGCAAGGGCACCACTTCCAAGACAGATATACAGATGGTCACATaGTGCTCCCTGTGCCGTGTAGAGAGAGGAACACAGCCCAATGCC +
Preference number: 6 (lower is better)
Translates to: SSKGTTSKTDIQMVT*CSLCRVERGTQPNA
Trigger: GGCATTGGGCTGTGTTCCTCTCTCTACACGGCACAGGGAGCACAATGTGACCATCTGTATATCTGTCTTGGAAGTGGTGCCCTTGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS TCA 72 bp TGGGTCGGAGAGTGGGCACTTGCAGGTTTCAGGATCTaGAGGAGATGTGAGGAGTTAATCACCCTGGTTCCT +
Preference number: 6 (lower is better)
Translates to: WVGEWALAGFRI*RRCEELITLVP
Trigger: AGGAACCAGGGTGATTAACTCCTCACATCTCCTTCAGATCCTGAAACCTGCAAGTGCCCACTCTCCGACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS CCA 72 bp AGGGATTTTCCCCGGCTTCTCACTTGGGTCGGAGAGTaGGCACTTGCAGGTTTCAGGATCTTCATTCTCATG +
Preference number: 6 (lower is better)
Translates to: RDFPRLLTWVGE*ALAGFRIFILM
Trigger: CATGAGAATGAAGATCCTGAAACCTGCAAGTGCCCACTCTCCGACCCAAGTGAGAAGCCGGGGAAAATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000517399.3
CDS CAA 72 bp AAGATGAGGTCACTCAGAGTCCGAAAAGTCAATGGCTaGTCCATCAGCTCAGCCCTGCGGCTCATGCCCAAT +
Preference number: 6 (lower is better)
Translates to: KMRSLRVRKVNG*SISSALRLMPN
Trigger: ATTGGGCATGAGCCGCAGGGCTGAGCTGATGGACAAGCCATTGACTTTTCGGACTCTGAGTGACCTCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271776.4
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000366969.2
ENST00000517399.3
CDS CAA 72 bp TCCTTCCTTATGTCAGCCCTCAGCATCTTTGAGACGTaGAGGACCAGCTGCTTCCACTCAATGGGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: SFLMSALSIFET*RTSCFHSMGWK
Trigger: CTTCCAGCCCATTGAGTGGAAGCAGCTGGTCCTCAACGTCTCAAAGATGCTGAGGGCTGACATAAGGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271776.4
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000517399.3
CDS TCA 72 bp GCCTCATTCCATGTCCCATTCTCGAATGTTATTCTGTaGCATATAACCAAGTCACCCGGGCAGCCGCCGATG +
Preference number: 6 (lower is better)
Translates to: ASFHVPFSNVIL*HITKSPGQPPM
Trigger: CATCGGCGGCTGCCCGGGTGACTTGGTTATATGTCACAGAATAACATTCGAGAATGGGACATGGAATGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366966.6
ENST00000517399.3
CDS TCA 72 bp GCCCCAGCACGGGGGCATTACAATAGAACAAATAAATaGAGCCTCGAGAGGCAGAGTTTACAAGCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: APARGHYNRTNK*SLERQSLQASS
Trigger: GGAGGAGGCTTGTAAACTCTGCCTCTCGAGGCTTCATTTATTTGTTCTATTGTAATGCCCCCGTGCTGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481097.1
CDS CAA 90 bp TGCAGAGAGAAGCACCACAGAAACCCTCTTGCTGGCCGGTATGGCTaGGCTAAATTCGGATTTGATAGCCCACTTCATTCAGAGTGCTCA +
Preference number: 6 (lower is better)
Translates to: CREKHHRNPLAGRYG*AKFGFDSPLHSECS
Trigger: TGAGCACTCTGAATGAAGTGGGCTATCAAATCCGAATTTAGCCAAGCCATACCGGCCAGCAAGAGGGTTTCTGTGGTGCTTCTCTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000517399.3
CDS CCA 72 bp AGCACCACAGAAACCCTCTTGCTGGCCGGTATGGCTTaGCTAAATTCGGATTTGATAGCCCACTTCATTCAG +
Preference number: 6 (lower is better)
Translates to: STTETLLLAGMA*LNSDLIAHFIQ
Trigger: CTGAATGAAGTGGGCTATCAAATCCGAATTTAGCCAAGCCATACCGGCCAGCAAGAGGGTTTCTGTGGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000517399.3
CDS CAA 72 bp CCCGAGGCTCGGCAGCATTTCTCCCCAGTTTGCATTTaGATGTTTCATATAACGTATCTACTCCCACCAGGG +
Preference number: 6 (lower is better)
Translates to: PEARQHFSPVCI*MFHITYLLPPG
Trigger: CCCTGGTGGGAGTAGATACGTTATATGAAACATCAAAATGCAAACTGGGGAGAAATGCTGCCGAGCCTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493155.1
CDS CAA 90 bp ACAGAAACCCTCTTGCTGGCCGGTATGGCTTGGCTAAATTCGGATTaGATAGCCCACTTCATTCAGAGTGCTCAGATCAGCCACCTTCTT +
Preference number: 6 (lower is better)
Translates to: TETLLLAGMAWLNSD*IAHFIQSAQISHLL
Trigger: AAGAAGGTGGCTGATCTGAGCACTCTGAATGAAGTGGGCTATCAAATCCGAATTTAGCCAAGCCATACCGGCCAGCAAGAGGGTTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000517399.3
CDS CAA 90 bp CGCTATAACCCCGAGGCTCGGCAGCATTTCTCCCCAGTTTGCATTTaGATGTTTCATATAACGTATCTACTCCCACCAGGGTACATCTCC +
Preference number: 6 (lower is better)
Translates to: RYNPEARQHFSPVCI*MFHITYLLPPGYIS
Trigger: GGAGATGTACCCTGGTGGGAGTAGATACGTTATATGAAACATCAAAATGCAAACTGGGGAGAAATGCTGCCGAGCCTCGGGGTTATAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493155.1
CDS TCA 72 bp CTGTGCCACATGGTTCCAGCATGGCAAGAGGCTGGGTaGCACAGCATGCTGCTATTATTAAGAAAAGCAGTA +
Preference number: 6 (lower is better)
Translates to: LCHMVPAWQEAG*HSMLLLLRKAV
Trigger: TACTGCTTTTCTTAATAATAGCAGCATGCTGTGTCACCCAGCCTCTTGCCATGCTGGAACCATGTGGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS CCA 72 bp CCCTCGGTAAAGATATCCTTAGCCACCAAACCCAAATaGCTCACTGGCTTCTCTCCAAGGCAAAAAGAGAGT +
Preference number: 6 (lower is better)
Translates to: PSVKISLATKPK*LTGFSPRQKES
Trigger: ACTCTCTTTTTGCCTTGGAGAGAAGCCAGTGAGCCATTTGGGTTTGGTGGCTAAGGATATCTTTACCGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493155.1
CDS CAA 72 bp AAGCACCACAGAAACCCTCTTGCTGGCCGGTATGGCTaGGCTAAATTCGGATTTGATAGCCCACTTCATTCA +
Preference number: 6 (lower is better)
Translates to: KHHRNPLAGRYG*AKFGFDSPLHS
Trigger: TGAATGAAGTGGGCTATCAAATCCGAATTTAGCCAAGCCATACCGGCCAGCAAGAGGGTTTCTGTGGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000517399.3
CDS CAA 72 bp CTGTGGGTTATGCCCAGGATGACAGCTTCAAGGCATTaGATAGGCAAGGACTCTCGGGTCATTTCTTTTGCT +
Preference number: 6 (lower is better)
Translates to: LWVMPRMTASRH*IGKDSRVISFA
Trigger: AGCAAAAGAAATGACCCGAGAGTCCTTGCCTATCAAATGCCTTGAAGCTGTCATCCTGGGCATAACCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366964.7
CDS GCA 72 bp GCTAAATTCGGATTTGATAGCCCACTTCATTCAGAGTaGTCAGATCAGCCACCTTCTTTTCAGGCAGTGCAG +
Preference number: 6 (lower is better)
Translates to: AKFGFDSPLHSE*SDQPPSFQAVQ
Trigger: CTGCACTGCCTGAAAAGAAGGTGGCTGATCTGAGCACTCTGAATGAAGTGGGCTATCAAATCCGAATTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000517399.3
CDS CCA 72 bp AAAGATATCCTTAGCCACCAAACCCAAATGGCTCACTaGCTTCTCTCCAAGGCAAAAAGAGAGTTTCACTCC +
Preference number: 6 (lower is better)
Translates to: KDILSHQTQMAH*LLSKAKREFHS
Trigger: GGAGTGAAACTCTCTTTTTGCCTTGGAGAGAAGCCAGTGAGCCATTTGGGTTTGGTGGCTAAGGATATCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493155.1
CDS CAA 72 bp GTTCAAATATTTGCCAGCGGATTATCGCTGGTGAATTaGGGCATCCCCAGCATCTCCAATCTGTCATTGCTT +
Preference number: 6 (lower is better)
Translates to: VQIFASGLSLVN*GIPSISNLSLL
Trigger: AAGCAATGACAGATTGGAGATGCTGGGGATGCCCAAATTCACCAGCGATAATCCGCTGGCAAATATTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS CAA 90 bp ATGGCTATAGTTCAAATATTTGCCAGCGGATTATCGCTGGTGAATTaGGGCATCCCCAGCATCTCCAATCTGTCATTGCTTAAGTGGGTT +
Preference number: 6 (lower is better)
Translates to: MAIVQIFASGLSLVN*GIPSISNLSLLKWV
Trigger: AACCCACTTAAGCAATGACAGATTGGAGATGCTGGGGATGCCCAAATTCACCAGCGATAATCCGCTGGCAAATATTTGAACTATAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS TCA 72 bp GATGACAAGTCCACAAGTGCTAAACATAGCCAGGCCTaGAGTCAGCATAATCCTTTTCTCTTAGTGACTGCA +
Preference number: 6 (lower is better)
Translates to: DDKSTSAKHSQA*SQHNPFLLVTA
Trigger: TGCAGTCACTAAGAGAAAAGGATTATGCTGACTTCAGGCCTGGCTATGTTTAGCACTTGTGGACTTGTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271776.4
CDS TCA 72 bp GCAGGTATTTCTTGTAAGAGTCCTCAAAGTCAAAGATaGGGTCACTCAGAGTCCGAAAAGTCAATGGCTTGT +
Preference number: 6 (lower is better)
Translates to: AGISCKSPQSQR*GHSESEKSMAC
Trigger: ACAAGCCATTGACTTTTCGGACTCTGAGTGACCTCATCTTTGACTTTGAGGACTCTTACAAGAAATACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271776.4
ENST00000366965.6
ENST00000366966.6
ENST00000366967.6
ENST00000366968.8
ENST00000366969.2
ENST00000517399.3