RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VAPB (Homo sapiens)

Ensembl gene IDs: ENSG00000124164

Ensembl transcript IDs: ENST00000265619.6, ENST00000395802.7, ENST00000463370.5, ENST00000475243.6, ENST00000476395.1, ENST00000520497.1

Found 419 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAACTGAAGACACGGAAAGCAGCCTGGGCCGGGAGTGGGCCACGTaGGGACTACTGTGTGGAGCTGACCGCACTCCCCAGCATGCTGGG +
Preference number: 1 (lower is better)
Translates to: RTEDTESSLGREWAT*GLLCGADRTPQHAG
Trigger: CCCAGCATGCTGGGGAGTGCGGTCAGCTCCACACAGTAGTCCCCACGTGGCCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR CCA 90 bp GGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTGGGCCGGGAGTaGGCCACGTGGGGACTACTGTGTGGAGCTGACCGCACTCCCCAG +
Preference number: 1 (lower is better)
Translates to: GLDRTEDTESSLGRE*ATWGLLCGADRTPQ
Trigger: CTGGGGAGTGCGGTCAGCTCCACACAGTAGTCCCCACGTGGCCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR TCA 90 bp CTGGTGCCCTCGCTTCTAACCCTCTGCAGCCCGATCCATTTGTCCTaGCTCCAGGCTAGGTCCCCAAGGGGAGGTCAGGCTCAGACTTGG +
Preference number: 1 (lower is better)
Translates to: LVPSLLTLCSPIHLS*LQARSPRGGQAQTW
Trigger: CCAAGTCTGAGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACAAATGGATCGGGCTGCAGAGGGTTAGAAGCGAGGGCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR CCA 90 bp AAGGAGCTGATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTaGGCCGGGAGTGGGCCACGTGGGGACTACTGTGTGGAGCTGACC +
Preference number: 1 (lower is better)
Translates to: KELMAWTELKTRKAA*AGSGPRGDYCVELT
Trigger: GGTCAGCTCCACACAGTAGTCCCCACGTGGCCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATCAGCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR TCA 90 bp TCCTGGCAGCTCTTCTCCAGCATCCCAATAAACCCCACCTCCACATaGCCAGACTCTCCAGAGACAGAGGAGCCCACAGCCCTCCAGCAG +
Preference number: 1 (lower is better)
Translates to: SWQLFSSIPINPTST*PDSPETEEPTALQQ
Trigger: CTGCTGGAGGGCTGTGGGCTCCTCTGTCTCTGGAGAGTCTGGTCATGTGGAGGTGGGGTTTATTGGGATGCTGGAGAAGAGCTGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR GCA 90 bp GTCTGTGAAGCTGGGGGCAGACCCATTCCCACAGCCTCCCAAGCTTaGCTGTCGGCTGACGCTCCTTATCAGGGGCTTCTATTACTTGCC +
Preference number: 1 (lower is better)
Translates to: VCEAGGRPIPTASQA*LSADAPYQGLLLLA
Trigger: GGCAAGTAATAGAAGCCCCTGATAAGGAGCGTCAGCCGACAGGCAAGCTTGGGAGGCTGTGGGAATGGGTCTGCCCCCAGCTTCACAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR GCA 90 bp CATGCACACTGCCCAGCGGCATCCTCCCTAGGCTCGCTCTTTCCATaGCAGTTTCGTCCCGATTATCTGACTCTTAACCCTCTTGGGGCA +
Preference number: 1 (lower is better)
Translates to: HAHCPAASSLGSLFP*QFRPDYLTLNPLGA
Trigger: TGCCCCAAGAGGGTTAAGAGTCAGATAATCGGGACGAAACTGGCATGGAAAGAGCGAGCCTAGGGAGGATGCCGCTGGGCAGTGTGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR TCA 90 bp ACTCAGACCAACCATAGACTTCCACTTCTCCAGTTTCAAGGCCCCTaGCCCAGCTTGACAGAGCCAGGCTTAGGAGCAACGTGGCTCAAC +
Preference number: 1 (lower is better)
Translates to: TQTNHRLPLLQFQGP*PSLTEPGLGATWLN
Trigger: GTTGAGCCACGTTGCTCCTAAGCCTGGCTCTGTCAAGCTGGGTCAGGGGCCTTGAAACTGGAGAAGTGGAAGTCTATGGTTGGTCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CCA 90 bp CCCTGCTCTAGTGTAATGGGACTGTACTGTACCCCTAGGCACTGTTaGGGACCACCTAAGCACTCTCCTATCAAAGACATGAGGGCCTGG +
Preference number: 1 (lower is better)
Translates to: PCSSVMGLYCTPRHC*GPPKHSPIKDMRAW
Trigger: CCAGGCCCTCATGTCTTTGATAGGAGAGTGCTTAGGTGGTCCCCAACAGTGCCTAGGGGTACAGTACAGTCCCATTACACTAGAGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR GCA 90 bp CCTTCTGATGAACTTGTCCTCTCAAACCTGTGCACAGTGGGACTGTaGCCAGAACGCCCGTTACTAGTCTCAATGGCATGGTTCCCTGAC +
Preference number: 1 (lower is better)
Translates to: PSDELVLSNLCTVGL*PERPLLVSMAWFPD
Trigger: GTCAGGGAACCATGCCATTGAGACTAGTAACGGGCGTTCTGGGCACAGTCCCACTGTGCACAGGTTTGAGAGGACAAGTTCATCAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CCA 90 bp ACAGTGGGACTGTGCCCAGAACGCCCGTTACTAGTCTCAATGGCATaGTTCCCTGACCTAGAAGGGAGGCTGCTTTTTACTGAAGGCCAA +
Preference number: 1 (lower is better)
Translates to: TVGLCPERPLLVSMA*FPDLEGRLLFTEGQ
Trigger: TTGGCCTTCAGTAAAAAGCAGCCTCCCTTCTAGGTCAGGGAACCATGCCATTGAGACTAGTAACGGGCGTTCTGGGCACAGTCCCACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CCA 90 bp GGGGTGGCCTCCCTGTCTGCACACTCAACACAATCCATGGGTGCCTaGGTAACAACTAAGTCTGTTCACCATTTCTGTGAGTACCTGGGA +
Preference number: 1 (lower is better)
Translates to: GVASLSAHSTQSMGA*VTTKSVHHFCEYLG
Trigger: TCCCAGGTACTCACAGAAATGGTGAACAGACTTAGTTGTTACCCAGGCACCCATGGATTGTGTTGAGTGTGCAGACAGGGAGGCCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CCA 90 bp AGTACTGGGGGACACATGGGAAAAATCCTGGAGACGAATTCCTATTaGGGTGGCCTCCCTGTCTGCACACTCAACACAATCCATGGGTGC +
Preference number: 1 (lower is better)
Translates to: STGGHMGKILETNSY*GGLPVCTLNTIHGC
Trigger: GCACCCATGGATTGTGTTGAGTGTGCAGACAGGGAGGCCACCCCAATAGGAATTCGTCTCCAGGATTTTTCCCATGTGTCCCCCAGTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR TCA 90 bp AGGTACGGAGGCAGACACAAAAGATGTACAGACGGGCAGAGTAGCTaGGGCAGGAAGGCCTCATCCACTCACTTCCCTGAAGCAGATTTT +
Preference number: 1 (lower is better)
Translates to: RYGGRHKRCTDGQSS*GRKASSTHFPEADF
Trigger: AAAATCTGCTTCAGGGAAGTGAGTGGATGAGGCCTTCCTGCCTCAGCTACTCTGCCCGTCTGTACATCTTTTGTGTCTGCCTCCGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR GCA 90 bp CACCCTAAATGTGCATGCATCTCCAAGTCCTCCAGGAGCCACGCGTaGTCCACATTCTTTCTTTTCCTGGCACATTTTTGGCTGCCAGGA +
Preference number: 1 (lower is better)
Translates to: HPKCACISKSSRSHA*STFFLFLAHFWLPG
Trigger: TCCTGGCAGCCAAAAATGTGCCAGGAAAAGAAAGAATGTGGAGCACGCGTGGCTCCTGGAGGACTTGGAGATGCATGCACATTTAGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR GCA 90 bp TCTTCCTTCCCAGTTGGGGCTAATGCTGAAATGGGGCTGTTGCTCTaGACTGTCTTCCTCATCCGCAGTCCATCTTCTTCCTTGAACTGC +
Preference number: 1 (lower is better)
Translates to: SSFPVGANAEMGLLL*TVFLIRSPSSSLNC
Trigger: GCAGTTCAAGGAAGAAGATGGACTGCGGATGAGGAAGACAGTGCAGAGCAACAGCCCCATTTCAGCATTAGCCCCAACTGGGAAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520497.1
3UTR TCA 90 bp CAAATCCAATTAGGCCACAGAAACTCAATTCGCGTAGGGCCAGCATaGTCTCAGAGCTGCTCTTGGTGTTCCAGAAGAGTGGTCGTTGGC +
Preference number: 1 (lower is better)
Translates to: QIQLGHRNSIRVGPA*SQSCSWCSRRVVVG
Trigger: GCCAACGACCACTCTTCTGGAACACCAAGAGCAGCTCTGAGATCATGCTGGCCCTACGCGAATTGAGTTTCTGTGGCCTAATTGGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR TCA 90 bp TTTCCAAAGCGCTGGGTCAATCAGTCAACACACGCCTCTCACTTATaGCGAGTACGTCTGATGCTGCCACAGTGCAATTCCTTTGGGCTT +
Preference number: 1 (lower is better)
Translates to: FPKRWVNQSTHASHL*RVRLMLPQCNSFGL
Trigger: AAGCCCAAAGGAATTGCACTGTGGCAGCATCAGACGTACTCGTCATAAGTGAGAGGCGTGTGTTGACTGATTGACCCAGCGCTTTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR TCA 90 bp CAGCTTGACAGAGCCAGGCTTAGGAGCAACGTGGCTCAACGTATGTaGCTTCTAAGGACTGCCTTCCTTCTGATGAACTTGTCCTCTCAA +
Preference number: 1 (lower is better)
Translates to: QLDRARLRSNVAQRM*LLRTAFLLMNLSSQ
Trigger: TTGAGAGGACAAGTTCATCAGAAGGAAGGCAGTCCTTAGAAGTCACATACGTTGAGCCACGTTGCTCCTAAGCCTGGCTCTGTCAAGCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR GCA 90 bp GGCAGGGCAGGTTTCATCAGGCTGATAATGGAACATGGGAGAACATaGTGTAAATGGCTCTTTTGGTCTGGACCCTGCAGAAATACATCT +
Preference number: 1 (lower is better)
Translates to: GRAGFIRLIMEHGRT*CKWLFWSGPCRNTS
Trigger: AGATGTATTTCTGCAGGGTCCAGACCAAAAGAGCCATTTACAGCATGTTCTCCCATGTTCCATTATCAGCCTGATGAAACCTGCCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR GCA 90 bp ACAAGTCATGTAAAGCCTCCATATAAAGCGCTCCCATCATCTCCTTaGCGAGACGGACTGGCAATATTCTTTCTAAAGCCCCCAAAGTCA +
Preference number: 1 (lower is better)
Translates to: TSHVKPPYKALPSSP*RDGLAIFFLKPPKS
Trigger: TGACTTTGGGGGCTTTAGAAAGAATATTGCCAGTCCGTCTCGGCAAGGAGATGATGGGAGCGCTTTATATGGAGGCTTTACATGACTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR GCA 90 bp GAACATGGGAGAACATGCTGTAAATGGCTCTTTTGGTCTGGACCCTaGAGAAATACATCTCCTTCTCTCTGGGAAACATCATGTCAGCTG +
Preference number: 1 (lower is better)
Translates to: EHGRTCCKWLFWSGP*RNTSPSLWETSCQL
Trigger: CAGCTGACATGATGTTTCCCAGAGAGAAGGAGATGTATTTCTGCAGGGTCCAGACCAAAAGAGCCATTTACAGCATGTTCTCCCATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR TCA 90 bp AGTCCATCTTCTTCCTTGAACTGCTTGTTCTCCTCCCGTAGCCTCTaGACTTCACCTTGCAGCCTCTTACATTCTTCCATAACCTTCTTA +
Preference number: 1 (lower is better)
Translates to: SPSSSLNCLFSSRSL*TSPCSLLHSSITFL
Trigger: TAAGAAGGTTATGGAAGAATGTAAGAGGCTGCAAGGTGAAGTTCAGAGGCTACGGGAGGAGAACAAGCAGTTCAAGGAAGAAGATGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520497.1
3UTR GCA 90 bp CTACTGACATACGGCACATATGCCACACATGCACACATGCACACATaGACACACACACAGAGTCTGTTTTCAAATTCATCTGAAAGGCTC +
Preference number: 1 (lower is better)
Translates to: LLTYGTYATHAHMHT*THTQSLFSNSSERL
Trigger: GAGCCTTTCAGATGAATTTGAAAACAGACTCTGTGTGTGTGTGCATGTGTGCATGTGTGCATGTGTGGCATATGTGCCGTATGTCAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CCA 90 bp CTCTCCTATCAAAGACATGAGGGCCTGGAAGCTACAGGACTTAACTaGCTGCAGCAACTACAATTAGTAAATTTTAGTCCCCTCACGGAA +
Preference number: 1 (lower is better)
Translates to: LSYQRHEGLEATGLN*LQQLQLVNFSPLTE
Trigger: TTCCGTGAGGGGACTAAAATTTACTAATTGTAGTTGCTGCAGCCAGTTAAGTCCTGTAGCTTCCAGGCCCTCATGTCTTTGATAGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CCA 90 bp GGTTTCATCAGGCTGATAATGGAACATGGGAGAACATGCTGTAAATaGCTCTTTTGGTCTGGACCCTGCAGAAATACATCTCCTTCTCTC +
Preference number: 1 (lower is better)
Translates to: GFIRLIMEHGRTCCK*LFWSGPCRNTSPSL
Trigger: GAGAGAAGGAGATGTATTTCTGCAGGGTCCAGACCAAAAGAGCCATTTACAGCATGTTCTCCCATGTTCCATTATCAGCCTGATGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR GCA 90 bp CCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCATaGTACCTCTACAAGGCAATCTTCCCAATAATTACACCAACGATA +
Preference number: 1 (lower is better)
Translates to: PMIWWIHQSNLPSCA*YLYKAIFPIITPTI
Trigger: TATCGTTGGTGTAATTATTGGGAAGATTGCCTTGTAGAGGTAGCATGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000520497.1
3UTR GCA 90 bp TTTGAAAACTGTCAAGCTACTGACATACGGCACATATGCCACACATaGACACATGCACACATGCACACACACACAGAGTCTGTTTTCAAA +
Preference number: 1 (lower is better)
Translates to: FENCQATDIRHICHT*THAHMHTHTESVFK
Trigger: TTTGAAAACAGACTCTGTGTGTGTGTGCATGTGTGCATGTGTGCATGTGTGGCATATGTGCCGTATGTCAGTAGCTTGACAGTTTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR GCA 90 bp AAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGTaGATGCTACCTCTACAAGGCAATCTTCCCAATAATTACACCAAC +
Preference number: 1 (lower is better)
Translates to: KSHDMVDPPIQFTIL*MLPLQGNLPNNYTN
Trigger: GTTGGTGTAATTATTGGGAAGATTGCCTTGTAGAGGTAGCATGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000520497.1
3UTR CCA 90 bp TTATTGAACATAATATGGAGACAGCTAGTACAAAAGTTTATGCCTTaGCAGGGCAGGTTTCATCAGGCTGATAATGGAACATGGGAGAAC +
Preference number: 1 (lower is better)
Translates to: LLNIIWRQLVQKFMP*QGRFHQADNGTWEN
Trigger: GTTCTCCCATGTTCCATTATCAGCCTGATGAAACCTGCCCTGCCAAGGCATAAACTTTTGTACTAGCTGTCTCCATATTATGTTCAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR TCA 90 bp TCTAGCAGCAGAAAGCGATTCTCCCACAGTACTGTTTTATTCAACTaGCATCTTTTAATCAAAGCAATCCATATCGTGGCAACATTCCAA +
Preference number: 1 (lower is better)
Translates to: SSSRKRFSHSTVLFN*HLLIKAIHIVATFQ
Trigger: TTGGAATGTTGCCACGATATGGATTGCTTTGATTAAAAGATGTCAGTTGAATAAAACAGTACTGTGGGAGAATCGCTTTCTGCTGCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CCA 90 bp TTCTTTTTACACATGGTTATGATAAATTTAAATCCCATGATATGGTaGATCCACCAATCCAATTTACCATCCTGTGCATGCTACCTCTAC +
Preference number: 1 (lower is better)
Translates to: FFLHMVMINLNPMIW*IHQSNLPSCACYLY
Trigger: GTAGAGGTAGCATGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATTTATCATAACCATGTGTAAAAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000520497.1
3UTR CCA 90 bp AATTTCTTTTTACACATGGTTATGATAAATTTAAATCCCATGATATaGTGGATCCACCAATCCAATTTACCATCCTGTGCATGCTACCTC +
Preference number: 1 (lower is better)
Translates to: NFFLHMVMINLNPMI*WIHQSNLPSCACYL
Trigger: GAGGTAGCATGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATTTATCATAACCATGTGTAAAAAGAAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000520497.1
3UTR-3UTR GCA 90 bp GATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTGGGCCGGGAGTGGGCCCCGCACTCCCCAGCATaGTGGGCTCCAGCTCCCCAA +
Preference number: 2 (lower is better)
Translates to: DGLDRTEDTESSLGREWAPHSPA*WAPAPQ
Trigger: TTGGGGAGCTGGAGCCCAGCATGCTGGGGAGTGCGG...GGCCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR-3UTR CCA 90 bp CATAGTTCAGTTTGGTTCTTTCTCCTTCTTCAGGCCAGACAGCCGGGGGCAGGGCGGGAGTGGGCCACGTaGGGACTACTGTGTGGAGCT +
Preference number: 2 (lower is better)
Translates to: HSSVWFFLLLQARQPGAGREWAT*GLLCGA
Trigger: AGCTCCACACAGTAGTCCCCACGTGGCCCACTCCCG...CCCTGCCCCCGGCTGTCTGGCCTGAAGAAGGAGAAAGAACCAAACTGAACTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR TCA 90 bp CATAGTTCAGTTTGGTTCTTTCTCCTTCTTCAGGCCAGACAGCCGGGGGCAGGGACTACTGTGTGGAGCTaGCCGCACTCCCCAGCATGC +
Preference number: 2 (lower is better)
Translates to: HSSVWFFLLLQARQPGAGTTVWS*PHSPAC
Trigger: GCATGCTGGGGAGTGCGGTCAGCTCCACACAGTAGT...CCCTGCCCCCGGCTGTCTGGCCTGAAGAAGGAGAAAGAACCAAACTGAACTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR TCA 90 bp CTTGCTCCCCACCCACAACTGCTGGTGCCCTCGCTTCTAACCCTCTGCAGCCCGTATGACGAGTACGTCTaGTGCTGCCACAGTGCAATT +
Preference number: 2 (lower is better)
Translates to: LAPHPQLLVPSLLTLCSPYDEYV*CCHSAI
Trigger: AATTGCACTGTGGCAGCATCAGACGTACTCGTCATA...CGGGCTGCAGAGGGTTAGAAGCGAGGGCACCAGCAGTTGTGGGTGGGGAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR-3UTR CCA 90 bp GGGCCACGTGGGGACTACTGTGTGGAGCTGACCGCACTCCCCAGCATGCTGGGCTTAAATCCCATGATATaGTGGATCCACCAATCCAAT +
Preference number: 2 (lower is better)
Translates to: GPRGDYCVELTALPSMLGLNPMI*WIHQSN
Trigger: ATTGGATTGGTGGATCCACCATATCATGGGATTTAA...GCCCAGCATGCTGGGGAGTGCGGTCAGCTCCACACAGTAGTCCCCACGTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR-3UTR CCA 90 bp TACTGCTGGTGCCAGCAGTTCAGAAGACGAGAGAAGGAAAACATGCAAACTAGGCACTCCCCAGCATGCTaGGCTCCAGCTCCCCAAGGG +
Preference number: 2 (lower is better)
Translates to: YCWCQQFRRREKENMQTRHSPAC*APAPQG
Trigger: CCCTTGGGGAGCTGGAGCCCAGCATGCTGGGGAGTG...CCTAGTTTGCATGTTTTCCTTCTCTCGTCTTCTGAACTGCTGGCACCAGCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR CCA 90 bp GAACAAAGCACTGCCATTTATTTCCAAAGCGCTGGGTCAATCAGTCAACACACGACACGGAAAGCAGCCTaGGCCGGGAGTGGGCCACGT +
Preference number: 2 (lower is better)
Translates to: EQSTAIYFQSAGSISQHTTRKAA*AGSGPR
Trigger: ACGTGGCCCACTCCCGGCCCAGGCTGCTTTCCGTGT...CGTGTGTTGACTGATTGACCCAGCGCTTTGGAAATAAATGGCAGTGCTTTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR CAA 90 bp AGGCCTTCTTCCTTCCCAGTTGGGGCTAATGCTGAAATGGGGCTGTaGCTCTGCACTGTCTTCCTCATCCGCAGTCCATCTTCTTCCTTG +
Preference number: 2 (lower is better)
Translates to: RPSSFPVGANAEMGL*LCTVFLIRSPSSSL
Trigger: CAAGGAAGAAGATGGACTGCGGATGAGGAAGACAGTGCAGAGCAACAGCCCCATTTCAGCATTAGCCCCAACTGGGAAGGAAGAAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520497.1
3UTR CAA 90 bp TGTCGGCTGACGCTCCTTATCAGGGGCTTCTATTACTTGCCCTCTTaGCTGATATCCTGGAGAACCGCAGTGCTAATTCAGGGAAAGGCC +
Preference number: 2 (lower is better)
Translates to: CRLTLLIRGFYYLPS*LISWRTAVLIQGKA
Trigger: GGCCTTTCCCTGAATTAGCACTGCGGTTCTCCAGGATATCAGCAAAGAGGGCAAGTAATAGAAGCCCCTGATAAGGAGCGTCAGCCGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR GCA 90 bp TCGCTCTTTCCATGCCAGTTTCGTCCCGATTATCTGACTCTTAACCCTCTTGGGTGCACAGTGGGACTGTaGCCAGAACGCCCGTTACTA +
Preference number: 2 (lower is better)
Translates to: SLFPCQFRPDYLTLNPLGCTVGL*PERPLL
Trigger: TAGTAACGGGCGTTCTGGGCACAGTCCCACTGTGCA...CCCAAGAGGGTTAAGAGTCAGATAATCGGGACGAAACTGGCATGGAAAGAGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR GCA 90 bp AGGCACGATTTGAAAACTGTCAAGCTACTGACATACGGCACATATGCCACACATCTCCCCCATGCACACTaGCCAGCGGCATCCTCCCTA +
Preference number: 2 (lower is better)
Translates to: RHDLKTVKLLTYGTYATHLPHAH*PAASSL
Trigger: TAGGGAGGATGCCGCTGGGCAGTGTGCATGGGGGAG...ATGTGTGGCATATGTGCCGTATGTCAGTAGCTTGACAGTTTTCAAATCGTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR CCA 90 bp ATCCTCCCTAGGCTCGCTCTTTCCATGCCAGTTTCGTCCCGATTATCTGACTCTGAATTCCTATTGGGGTaGCCTCCCTGTCTGCACACT +
Preference number: 2 (lower is better)
Translates to: ILPRLALSMPVSSRLSDSEFLLG*PPCLHT
Trigger: AGTGTGCAGACAGGGAGGCCACCCCAATAGGAATTC...AGAGTCAGATAATCGGGACGAAACTGGCATGGAAAGAGCGAGCCTAGGGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CAA 90 bp AAGCTTGCCTGTCGGCTGACGCTCCTTATCAGGGGCTTCTATTACTaGCCCTCTTTGCTGATATCCTGGAGAACCGCAGTGCTAATTCAG +
Preference number: 2 (lower is better)
Translates to: KLACRLTLLIRGFYY*PSLLISWRTAVLIQ
Trigger: CTGAATTAGCACTGCGGTTCTCCAGGATATCAGCAAAGAGGGCAAGTAATAGAAGCCCCTGATAAGGAGCGTCAGCCGACAGGCAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR TCA 90 bp TACTGCTGGTGCCAGCAGTTCAGAAGACGAGAGAAGGAAAACATGCAAACTAGGTGGGCGCTGGAAGTGTaGGTAATGGTTGAGAGGTGG +
Preference number: 2 (lower is better)
Translates to: YCWCQQFRRREKENMQTRWALEV*VMVERW
Trigger: CCACCTCTCAACCATTACTCACACTTCCAGCGCCCA...CCTAGTTTGCATGTTTTCCTTCTCTCGTCTTCTGAACTGCTGGCACCAGCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR TCA 90 bp CAGAAGGCACATGCCTTACAGCTCGGTCTTTTCACTCCCTTTTATAAGTACTGGCCGATCCATTTGTCCTaGCTCCAGGCTAGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: QKAHALQLGLFTPFYKYWPIHLS*LQARSP
Trigger: TGGGGACCTAGCCTGGAGTCAGGACAAATGGATCGG...CCAGTACTTATAAAAGGGAGTGAAAAGACCGAGCTGTAAGGCATGTGCCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR CCA 90 bp ATCCTCCCTAGGCTCGCTCTTTCCATGCCAGTTTCGTCCCGATTATCTGACTCTGTACTGGGGGACACATaGGAAAAATCCTGGAGACGA +
Preference number: 2 (lower is better)
Translates to: ILPRLALSMPVSSRLSDSVLGDT*EKSWRR
Trigger: TCGTCTCCAGGATTTTTCCCATGTGTCCCCCAGTAC...AGAGTCAGATAATCGGGACGAAACTGGCATGGAAAGAGCGAGCCTAGGGAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR CCA 90 bp CATAGTTCAGTTTGGTTCTTTCTCCTTCTTCAGGCCAGACAGCCGGGGGCAGGGAAAGACATGAGGGCCTaGAAGCTACAGGACTTAACT +
Preference number: 2 (lower is better)
Translates to: HSSVWFFLLLQARQPGAGKDMRA*KLQDLT
Trigger: AGTTAAGTCCTGTAGCTTCCAGGCCCTCATGTCTTT...CCCTGCCCCCGGCTGTCTGGCCTGAAGAAGGAGAAAGAACCAAACTGAACTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CAA 90 bp CAGAAACTCAATTCGCGTAGGGCCAGCATGATCTCAGAGCTGCTCTaGGTGTTCCAGAAGAGTGGTCGTTGGCCTTATGGGATTTGTATG +
Preference number: 2 (lower is better)
Translates to: QKLNSRRASMISELL*VFQKSGRWPYGICM
Trigger: CATACAAATCCCATAAGGCCAACGACCACTCTTCTGGAACACCAAGAGCAGCTCTGAGATCATGCTGGCCCTACGCGAATTGAGTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CAA 90 bp GACGGGAATGCAGGCAGCCAGTTCGGAGAAACAGCCAGGACTTTTTaGTATGACATGGAAAAACCGGCAAGTCAACGTGTGAAACGTGCA +
Preference number: 2 (lower is better)
Translates to: DGNAGSQFGETARTF*YDMEKPASQRVKRA
Trigger: TGCACGTTTCACACGTTGACTTGCCGGTTTTTCCATGTCATACAAAAAAGTCCTGGCTGTTTCTCCGAACTGGCTGCCTGCATTCCCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR CCA 90 bp CCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACGCATACAATATGCCATTGTaGCATTACTCATGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: PQPSSSNTSSPNRVQQHAYNMPL*HYSWFP
Trigger: GGGAAACCATGAGTAATGCCACAATGGCATATTGTA...TGCGTGCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR-3UTR CCA 90 bp CATAGTTCAGTTTGGTTCTTTCTCCTTCTTCAGGCCAGACAGCCGGGGGCAGGGAGTATGTATTACTGCTaGTGCCAGCAGTTCAGAAGA +
Preference number: 2 (lower is better)
Translates to: HSSVWFFLLLQARQPGAGSMYYC*CQQFRR
Trigger: TCTTCTGAACTGCTGGCACCAGCAGTAATACATACT...CCCTGCCCCCGGCTGTCTGGCCTGAAGAAGGAGAAAGAACCAAACTGAACTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR TCA 90 bp CAGAAGGCACATGCCTTACAGCTCGGTCTTTTCACTCCCTTTTATAAGTACTGGTGGCTTGGACAGAACTaGAGACACGGAAAGCAGCCT +
Preference number: 2 (lower is better)
Translates to: QKAHALQLGLFTPFYKYWWLGQN*RHGKQP
Trigger: AGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCA...CCAGTACTTATAAAAGGGAGTGAAAAGACCGAGCTGTAAGGCATGTGCCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR GCA 90 bp CCACCAATCCAATTTACCATCCTGTGCATGCTACCTCTACAAGGCAATCTTCCCCTGAAATGGGGCTGTTaGTCTGCACTGTCTTCCTCA +
Preference number: 2 (lower is better)
Translates to: PPIQFTILCMLPLQGNLPLKWGC*SALSSS
Trigger: TGAGGAAGACAGTGCAGAGCAACAGCCCCATTTCAG...GGGAAGATTGCCTTGTAGAGGTAGCATGCACAGGATGGTAAATTGGATTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520497.1
3UTR-3UTR CCA 90 bp ATTTGTCCTGACTCCAGGCTAGGTCCCCAAGGGGAGGTCAGGCTCAGACTTGGAAATCCCATGATATGGTaGATCCACCAATCCAATTTA +
Preference number: 2 (lower is better)
Translates to: ICPDSRLGPQGEVRLRLGNPMIW*IHQSNL
Trigger: TAAATTGGATTGGTGGATCCACCATATCATGGGATT...TCCAAGTCTGAGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR-3UTR TCA 90 bp GGCCAAAGCAATGGAAGGCCAAGGGTGACCAGGTGCTCAGCTTTTTCAGCAGTTGAATTTCCCTCCCTATaGCAGTTGTTATTTACTGAC +
Preference number: 2 (lower is better)
Translates to: GQSNGRPRVTRCSAFSAVEFPSL*QLLFTD
Trigger: GTCAGTAAATAACAACTGTCATAGGGAGGGAAATTC...AACTGCTGAAAAAGCTGAGCACCTGGTCACCCTTGGCCTTCCATTGCTTTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR TCA 90 bp GCATGCTACCTCTACAAGGCAATCTTCCCAATAATTACACCAACGATAAAGAACTCCTCCCGTAGCCTCTaGACTTCACCTTGCAGCCTC +
Preference number: 2 (lower is better)
Translates to: ACYLYKAIFPIITPTIKNSSRSL*TSPCSL
Trigger: GAGGCTGCAAGGTGAAGTTCAGAGGCTACGGGAGGA...GTTCTTTATCGTTGGTGTAATTATTGGGAAGATTGCCTTGTAGAGGTAGCATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520497.1
3UTR-3UTR GCA 90 bp CAGAAGGCACATGCCTTACAGCTCGGTCTTTTCACTCCCTTTTATAAGTACTGGCTGATGCTGCCACAGTaGAATTCCTTTGGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: QKAHALQLGLFTPFYKYWLMLPQ*NSFGLL
Trigger: CAGAAGCCCAAAGGAATTGCACTGTGGCAGCATCAG...CCAGTACTTATAAAAGGGAGTGAAAAGACCGAGCTGTAAGGCATGTGCCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR GCA 90 bp TACTGCTGGTGCCAGCAGTTCAGAAGACGAGAGAAGGAAAACATGCAAACTAGGCGCTTCCATCTCTTCTaGATTTGTGAGCACTATGGC +
Preference number: 2 (lower is better)
Translates to: YCWCQQFRRREKENMQTRRFHLF*ICEHYG
Trigger: GCCATAGTGCTCACAAATGCAGAAGAGATGGAAGCG...CCTAGTTTGCATGTTTTCCTTCTCTCGTCTTCTGAACTGCTGGCACCAGCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR GCA 90 bp ATAAACATCAGCATTTATCTAGCAGCAGAAAGCGATTCTCCCACAGTACTGTTTACAGCCTCCCAAGCTTaGCTGTCGGCTGACGCTCCT +
Preference number: 2 (lower is better)
Translates to: INISIYLAAESDSPTVLFTASQA*LSADAP
Trigger: AGGAGCGTCAGCCGACAGGCAAGCTTGGGAGGCTGT...AAACAGTACTGTGGGAGAATCGCTTTCTGCTGCTAGATAAATGCTGATGTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR GCA 90 bp CCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCATGCTACCTCTCTTCTTCCTTGAACTaGTTGTTCTCCTCCCGTAGC +
Preference number: 2 (lower is better)
Translates to: PMIWWIHQSNLPSCACYLSSSLN*LFSSRS
Trigger: GCTACGGGAGGAGAACAAGCAGTTCAAGGAAGAAGA...GAGGTAGCATGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520497.1
3UTR-3UTR CCA 90 bp CAGAAACTCAATTCGCGTAGGGCCAGCATGATCTCAGAGCTGCTCTTGGTGTTCTGGTCGTTGGCCTTATaGGATTTGTATGTCATGAAC +
Preference number: 2 (lower is better)
Translates to: QKLNSRRASMISELLLVFWSLAL*DLYVMN
Trigger: GTTCATGACATACAAATCCCATAAGGCCAACGACCA...GAACACCAAGAGCAGCTCTGAGATCATGCTGGCCCTACGCGAATTGAGTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR TCA 90 bp CAGAAGGCACATGCCTTACAGCTCGGTCTTTTCACTCCCTTTTATAAGTACTGGATTCCTTTGGGCTTCTaGCTCTGTTCATCAGTCCCA +
Preference number: 2 (lower is better)
Translates to: QKAHALQLGLFTPFYKYWIPLGF*LCSSVP
Trigger: TGGGACTGATGAACAGAGTCAGAAGCCCAAAGGAAT...CCAGTACTTATAAAAGGGAGTGAAAAGACCGAGCTGTAAGGCATGTGCCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR TCA 90 bp CAGAAACTCAATTCGCGTAGGGCCAGCATGATCTCAGAGCTGCTCTTGGTGTTCACATTCAGTTCTATCTaGCTCAACATAGCCTGCAAA +
Preference number: 2 (lower is better)
Translates to: QKLNSRRASMISELLLVFTFSSI*LNIACK
Trigger: TTTGCAGGCTATGTTGAGTCAGATAGAACTGAATGT...GAACACCAAGAGCAGCTCTGAGATCATGCTGGCCCTACGCGAATTGAGTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR GCA 90 bp CCACCAATCCAATTTACCATCCTGTGCATGCTACCTCTACAAGGCAATCTTCCCTTACCATCCTGTGCATaGTACCTCTACAAGGCAATC +
Preference number: 2 (lower is better)
Translates to: PPIQFTILCMLPLQGNLPLPSCA*YLYKAI
Trigger: GATTGCCTTGTAGAGGTAGCATGCACAGGATGGTAA...GGGAAGATTGCCTTGTAGAGGTAGCATGCACAGGATGGTAAATTGGATTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000520497.1
3UTR-3UTR GCA 90 bp GTGTGTGCAGGGAGGGGTAATTTAAAGGCAAGACCTGTGAGATGTCATCATACATTACCATCCTGTGCATaGTACCTCTACAAGGCAATC +
Preference number: 2 (lower is better)
Translates to: VCAGRGNLKARPVRCHHTLPSCA*YLYKAI
Trigger: GATTGCCTTGTAGAGGTAGCATGCACAGGATGGTAA...TGTATGATGACATCTCACAGGTCTTGCCTTTAAATTACCCCTCCCTGCACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000520497.1
3UTR-3UTR CCA 90 bp TACTGCTGGTGCCAGCAGTTCAGAAGACGAGAGAAGGAAAACATGCAAACTAGGGCTACAGGACTTAACTaGCTGCAGCAACTACAATTA +
Preference number: 2 (lower is better)
Translates to: YCWCQQFRRREKENMQTRATGLN*LQQLQL
Trigger: TAATTGTAGTTGCTGCAGCCAGTTAAGTCCTGTAGC...CCTAGTTTGCATGTTTTCCTTCTCTCGTCTTCTGAACTGCTGGCACCAGCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR GCA 90 bp ATAAACATCAGCATTTATCTAGCAGCAGAAAGCGATTCTCCCACAGTACTGTTTTCGCTTCTAACCCTCTaGAGCCCGATCCATTTGTCC +
Preference number: 2 (lower is better)
Translates to: INISIYLAAESDSPTVLFSLLTL*SPIHLS
Trigger: GGACAAATGGATCGGGCTGCAGAGGGTTAGAAGCGA...AAACAGTACTGTGGGAGAATCGCTTTCTGCTGCTAGATAAATGCTGATGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR GCA 90 bp AAAATAAACATCAGCATTTATCTAGCAGCAGAAAGCGATTCTCCCACAGTACTGGGTGGCCTCCCTGTCTaGACACTCAACACAATCCAT +
Preference number: 2 (lower is better)
Translates to: KINISIYLAAESDSPTVLGGLPV*TLNTIH
Trigger: ATGGATTGTGTTGAGTGTGCAGACAGGGAGGCCACC...CAGTACTGTGGGAGAATCGCTTTCTGCTGCTAGATAAATGCTGATGTTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR CCA 90 bp TCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACGCAGCATTAACTTTAAATCCCATGATATaGTGGATCCACCAATCCAAT +
Preference number: 2 (lower is better)
Translates to: SSSNTSSPNRVQQHAALTLNPMI*WIHQSN
Trigger: ATTGGATTGGTGGATCCACCATATCATGGGATTTAA...AGTTAATGCTGCGTGCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR-3UTR GCA 90 bp ATAAACATCAGCATTTATCTAGCAGCAGAAAGCGATTCTCCCACAGTACTGTTTCCAAGGGTGACCAGGTaGTCAGCTTTTTCAGCAGTT +
Preference number: 2 (lower is better)
Translates to: INISIYLAAESDSPTVLFPRVTR*SAFSAV
Trigger: AACTGCTGAAAAAGCTGAGCACCTGGTCACCCTTGG...AAACAGTACTGTGGGAGAATCGCTTTCTGCTGCTAGATAAATGCTGATGTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR TCA 90 bp ATAAACATCAGCATTTATCTAGCAGCAGAAAGCGATTCTCCCACAGTACTGTTTGAGGCTGCTTTTTACTaGAGGCCAAAGCAATGGAAG +
Preference number: 2 (lower is better)
Translates to: INISIYLAAESDSPTVLFEAAFY*RPKQWK
Trigger: CTTCCATTGCTTTGGCCTTCAGTAAAAAGCAGCCTC...AAACAGTACTGTGGGAGAATCGCTTTCTGCTGCTAGATAAATGCTGATGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR TCA 90 bp AGGCACGATTTGAAAACTGTCAAGCTACTGACATACGGCACATATGCCACACATTTCCTGGGATTTGTTTaGAAGCGTTTAGGTTTTCAC +
Preference number: 2 (lower is better)
Translates to: RHDLKTVKLLTYGTYATHFLGFV*KRLGFH
Trigger: GTGAAAACCTAAACGCTTTCAAACAAATCCCAGGAA...ATGTGTGGCATATGTGCCGTATGTCAGTAGCTTGACAGTTTTCAAATCGTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR GCA 90 bp GCATGCTACCTCTACAAGGCAATCTTCCCAATAATTACACCAACGATAAAGAACCAATTTACCATCCTGTaGATGCTACCTCTACAAGGC +
Preference number: 2 (lower is better)
Translates to: ACYLYKAIFPIITPTIKNQFTIL*MLPLQG
Trigger: GCCTTGTAGAGGTAGCATGCACAGGATGGTAAATTG...GTTCTTTATCGTTGGTGTAATTATTGGGAAGATTGCCTTGTAGAGGTAGCATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000520497.1
3UTR-3UTR TCA 90 bp ATAAACATCAGCATTTATCTAGCAGCAGAAAGCGATTCTCCCACAGTACTGTTTACTAGAAGGATTCGCTaGAGAGTTTCTCTCTTCCCT +
Preference number: 2 (lower is better)
Translates to: INISIYLAAESDSPTVLFTRRIR*RVSLFP
Trigger: AGGGAAGAGAGAAACTCTTCAGCGAATCCTTCTAGT...AAACAGTACTGTGGGAGAATCGCTTTCTGCTGCTAGATAAATGCTGATGTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR GCA 90 bp TTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGTAATCAATTTACCATCCTGTaGATGCTACCTCTACAAGGC +
Preference number: 2 (lower is better)
Translates to: LHYICVCVSVYVCAGRGNQFTIL*MLPLQG
Trigger: GCCTTGTAGAGGTAGCATGCACAGGATGGTAAATTG...ATTACCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000520497.1
3UTR-3UTR GCA 90 bp AAAATAAACATCAGCATTTATCTAGCAGCAGAAAGCGATTCTCCCACAGTACTGATGTATTACTGCTGGTaGCAGCAGTTCAGAAGACGA +
Preference number: 2 (lower is better)
Translates to: KINISIYLAAESDSPTVLMYYCW*QQFRRR
Trigger: TCGTCTTCTGAACTGCTGGCACCAGCAGTAATACAT...CAGTACTGTGGGAGAATCGCTTTCTGCTGCTAGATAAATGCTGATGTTTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR CCA 90 bp TTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCATGAATCCCATGATATGGTaGATCCACCAATCCAATTTA +
Preference number: 2 (lower is better)
Translates to: FKSHDMVDPPIQFTILCMNPMIW*IHQSNL
Trigger: TAAATTGGATTGGTGGATCCACCATATCATGGGATT...CATGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
3UTR-3UTR CCA 90 bp AAAATAAACATCAGCATTTATCTAGCAGCAGAAAGCGATTCTCCCACAGTACTGTCTCTAGCCATAAACTaGCCACTGGTAAAAATCAAT +
Preference number: 2 (lower is better)
Translates to: KINISIYLAAESDSPTVLSLAIN*PLVKIN
Trigger: ATTGATTTTTACCAGTGGCCAGTTTATGGCTAGAGA...CAGTACTGTGGGAGAATCGCTTTCTGCTGCTAGATAAATGCTGATGTTTATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR CCA 90 bp AAAATAAACATCAGCATTTATCTAGCAGCAGAAAGCGATTCTCCCACAGTACTGGTAATGGTTGAGAGGTaGTATAAGAACAATCTAGAA +
Preference number: 2 (lower is better)
Translates to: KINISIYLAAESDSPTVLVMVER*YKNNLE
Trigger: TTCTAGATTGTTCTTATACCACCTCTCAACCATTAC...CAGTACTGTGGGAGAATCGCTTTCTGCTGCTAGATAAATGCTGATGTTTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR CCA 90 bp CTAAAAGATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGAATCCCATGATATGGTaGATCCACCAATCCAATTTA +
Preference number: 2 (lower is better)
Translates to: LKDRYIIFVCVYLCMCVQNPMIW*IHQSNL
Trigger: TAAATTGGATTGGTGGATCCACCATATCATGGGATT...CTGCACACACATACACAGATACACACACACAAATATAATGTAACGATCTTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
3UTR TCA 72 bp CCGGGAGTGGGCCACGTGGGGACTACTGTGTGGAGCTaGCCGCACTCCCCAGCATGCTGGGCTCCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: PGVGHVGTTVWS*PHSPACWAPAP
Trigger: GGGAGCTGGAGCCCAGCATGCTGGGGAGTGCGGTCAGCTCCACACAGTAGTCCCCACGTGGCCCACTCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR CCA 72 bp GACACGGAAAGCAGCCTGGGCCGGGAGTGGGCCACGTaGGGACTACTGTGTGGAGCTGACCGCACTCCCCAG +
Preference number: 3 (lower is better)
Translates to: DTESSLGREWAT*GLLCGADRTPQ
Trigger: CTGGGGAGTGCGGTCAGCTCCACACAGTAGTCCCCACGTGGCCCACTCCCGGCCCAGGCTGCTTTCCGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR CCA 72 bp AGAACTGAAGACACGGAAAGCAGCCTGGGCCGGGAGTaGGCCACGTGGGGACTACTGTGTGGAGCTGACCGC +
Preference number: 3 (lower is better)
Translates to: RTEDTESSLGRE*ATWGLLCGADR
Trigger: GCGGTCAGCTCCACACAGTAGTCCCCACGTGGCCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR CCA 72 bp ATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTaGGCCGGGAGTGGGCCACGTGGGGACTACTGTGTG +
Preference number: 3 (lower is better)
Translates to: MAWTELKTRKAA*AGSGPRGDYCV
Trigger: CACACAGTAGTCCCCACGTGGCCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR TCA 72 bp TCGCTTCTAACCCTCTGCAGCCCGATCCATTTGTCCTaGCTCCAGGCTAGGTCCCCAAGGGGAGGTCAGGCT +
Preference number: 3 (lower is better)
Translates to: SLLTLCSPIHLS*LQARSPRGGQA
Trigger: AGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACAAATGGATCGGGCTGCAGAGGGTTAGAAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR GCA 72 bp GCAGAAGGCCAGGCGCACTCCTGCAGCTCATCAGAATaGAAGCAGGAAAGCAGGCCAGCAAGCGAGCATCTG +
Preference number: 3 (lower is better)
Translates to: AEGQAHSCSSSE*KQESRPASEHL
Trigger: CAGATGCTCGCTTGCTGGCCTGCTTTCCTGCTTGCATTCTGATGAGCTGCAGGAGTGCGCCTGGCCTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR CAA 90 bp CCAGAGACAGAGGAGCCCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGCAAGGAGCTGATGGCTaGGACAGAACTGAAGACACG +
Preference number: 3 (lower is better)
Translates to: PETEEPTALQQQYQFTQQQGADG*DRTEDT
Trigger: CGTGTCTTCAGTTCTGTCCAAGCCATCAGCTCCTTG...CTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGGGCTCCTCTGTCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR-3UTR CAA 90 bp CATAGTTCAGTTTGGTTCTTTCTCCTTCTTCAGGCCAGACAGCCGGGGGCAGGGGGAGACGAATTCCTATaGGGGTGGCCTCCCTGTCTG +
Preference number: 3 (lower is better)
Translates to: HSSVWFFLLLQARQPGAGGDEFL*GWPPCL
Trigger: CAGACAGGGAGGCCACCCCAATAGGAATTCGTCTCC...CCCTGCCCCCGGCTGTCTGGCCTGAAGAAGGAGAAAGAACCAAACTGAACTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR TCA 72 bp CTCTTCTCCAGCATCCCAATAAACCCCACCTCCACATaGCCAGACTCTCCAGAGACAGAGGAGCCCACAGCC +
Preference number: 3 (lower is better)
Translates to: LFSSIPINPTST*PDSPETEEPTA
Trigger: GGCTGTGGGCTCCTCTGTCTCTGGAGAGTCTGGTCATGTGGAGGTGGGGTTTATTGGGATGCTGGAGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR TCA 72 bp GCTCGCTCTTTCCATGCCAGTTTCGTCCCGATTATCTaGCTCTTAACCCTCTTGGGGCAGGGCAGGCCGTTG +
Preference number: 3 (lower is better)
Translates to: ARSFHASFVPII*LLTLLGQGRPL
Trigger: CAACGGCCTGCCCTGCCCCAAGAGGGTTAAGAGTCAGATAATCGGGACGAAACTGGCATGGAAAGAGCGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR GCA 72 bp TGCCCAGCGGCATCCTCCCTAGGCTCGCTCTTTCCATaGCAGTTTCGTCCCGATTATCTGACTCTTAACCCT +
Preference number: 3 (lower is better)
Translates to: CPAASSLGSLFP*QFRPDYLTLNP
Trigger: AGGGTTAAGAGTCAGATAATCGGGACGAAACTGGCATGGAAAGAGCGAGCCTAGGGAGGATGCCGCTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CCA 72 bp GGCCTTCTTCCTTCCCAGTTGGGGCTAATGCTGAAATaGGGCTGTTGCTCTGCACTGTCTTCCTCATCCGCA +
Preference number: 3 (lower is better)
Translates to: GLLPSQLGLMLK*GCCSALSSSSA
Trigger: TGCGGATGAGGAAGACAGTGCAGAGCAACAGCCCCATTTCAGCATTAGCCCCAACTGGGAAGGAAGAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520497.1
3UTR TCA 72 bp AACCATAGACTTCCACTTCTCCAGTTTCAAGGCCCCTaGCCCAGCTTGACAGAGCCAGGCTTAGGAGCAACG +
Preference number: 3 (lower is better)
Translates to: NHRLPLLQFQGP*PSLTEPGLGAT
Trigger: CGTTGCTCCTAAGCCTGGCTCTGTCAAGCTGGGTCAGGGGCCTTGAAACTGGAGAAGTGGAAGTCTATGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR TCA 72 bp GGCAGACACAAAAGATGTACAGACGGGCAGAGTAGCTaGGGCAGGAAGGCCTCATCCACTCACTTCCCTGAA +
Preference number: 3 (lower is better)
Translates to: GRHKRCTDGQSS*GRKASSTHFPE
Trigger: TTCAGGGAAGTGAGTGGATGAGGCCTTCCTGCCTCAGCTACTCTGCCCGTCTGTACATCTTTTGTGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR GCA 72 bp GAACTTGTCCTCTCAAACCTGTGCACAGTGGGACTGTaGCCAGAACGCCCGTTACTAGTCTCAATGGCATGG +
Preference number: 3 (lower is better)
Translates to: ELVLSNLCTVGL*PERPLLVSMAW
Trigger: CCATGCCATTGAGACTAGTAACGGGCGTTCTGGGCACAGTCCCACTGTGCACAGGTTTGAGAGGACAAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR GCA 72 bp CCAGTTGGGGCTAATGCTGAAATGGGGCTGTTGCTCTaGACTGTCTTCCTCATCCGCAGTCCATCTTCTTCC +
Preference number: 3 (lower is better)
Translates to: PVGANAEMGLLL*TVFLIRSPSSS
Trigger: GGAAGAAGATGGACTGCGGATGAGGAAGACAGTGCAGAGCAACAGCCCCATTTCAGCATTAGCCCCAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520497.1
3UTR GCA 72 bp CCTTCCCAGTTGGGGCTAATGCTGAAATGGGGCTGTTaGTCTGCACTGTCTTCCTCATCCGCAGTCCATCTT +
Preference number: 3 (lower is better)
Translates to: PSQLGLMLKWGC*SALSSSSAVHL
Trigger: AAGATGGACTGCGGATGAGGAAGACAGTGCAGAGCAACAGCCCCATTTCAGCATTAGCCCCAACTGGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520497.1
3UTR TCA 72 bp CGCTGGGTCAATCAGTCAACACACGCCTCTCACTTATaGCGAGTACGTCTGATGCTGCCACAGTGCAATTCC +
Preference number: 3 (lower is better)
Translates to: RWVNQSTHASHL*RVRLMLPQCNS
Trigger: GGAATTGCACTGTGGCAGCATCAGACGTACTCGTCATAAGTGAGAGGCGTGTGTTGACTGATTGACCCAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR TCA 72 bp TTAGGCCACAGAAACTCAATTCGCGTAGGGCCAGCATaGTCTCAGAGCTGCTCTTGGTGTTCCAGAAGAGTG +
Preference number: 3 (lower is better)
Translates to: LGHRNSIRVGPA*SQSCSWCSRRV
Trigger: CACTCTTCTGGAACACCAAGAGCAGCTCTGAGATCATGCTGGCCCTACGCGAATTGAGTTTCTGTGGCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CCA 72 bp CATGGGAAAAATCCTGGAGACGAATTCCTATTGGGGTaGCCTCCCTGTCTGCACACTCAACACAATCCATGG +
Preference number: 3 (lower is better)
Translates to: HGKNPGDEFLLG*PPCLHTQHNPW
Trigger: CCATGGATTGTGTTGAGTGTGCAGACAGGGAGGCCACCCCAATAGGAATTCGTCTCCAGGATTTTTCCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CCA 72 bp CCACCTAAGCACTCTCCTATCAAAGACATGAGGGCCTaGAAGCTACAGGACTTAACTGGCTGCAGCAACTAC +
Preference number: 3 (lower is better)
Translates to: PPKHSPIKDMRA*KLQDLTGCSNY
Trigger: GTAGTTGCTGCAGCCAGTTAAGTCCTGTAGCTTCCAGGCCCTCATGTCTTTGATAGGAGAGTGCTTAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR CAA 90 bp TCCATTTGTCCTGACTCCAGGCTAGGTCCCCAAGGGGAGGTCAGGCTCAGACTTAAAGGTAACCTAGAGTaGACTGTCACTACTGAGAAT +
Preference number: 3 (lower is better)
Translates to: SICPDSRLGPQGEVRLRLKGNLE*TVTTEN
Trigger: ATTCTCAGTAGTGACAGTCAACTCTAGGTTACCTTT...AAGTCTGAGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACAAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR TCA 72 bp GGTCAGGCTCAGACTTGGACCTGGGCGCTGGAAGTGTaGGTAATGGTTGAGAGGTGGTATAAGAACAATCTA +
Preference number: 3 (lower is better)
Translates to: GQAQTWTWALEV*VMVERWYKNNL
Trigger: TAGATTGTTCTTATACCACCTCTCAACCATTACTCACACTTCCAGCGCCCAGGTCCAAGTCTGAGCCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
3UTR TCA 72 bp CGAGCATCTGTCCTGCACCCACATCCATTAGCCAAGTaGTTACATCTCCATCAGCCCTGGGGTGTAATAAAG +
Preference number: 3 (lower is better)
Translates to: RASVLHPHPLAK*LHLHQPWGVIK
Trigger: CTTTATTACACCCCAGGGCTGATGGAGATGTAATCACTTGGCTAATGGATGTGGGTGCAGGACAGATGCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CCA 72 bp AGTGTAATGGGACTGTACTGTACCCCTAGGCACTGTTaGGGACCACCTAAGCACTCTCCTATCAAAGACATG +
Preference number: 3 (lower is better)
Translates to: SVMGLYCTPRHC*GPPKHSPIKDM
Trigger: CATGTCTTTGATAGGAGAGTGCTTAGGTGGTCCCCAACAGTGCCTAGGGGTACAGTACAGTCCCATTACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR GCA 72 bp TGTCAAGCTACTGACATACGGCACATATGCCACACATaGACACATGCACACATGCACACACACACAGAGTCT +
Preference number: 3 (lower is better)
Translates to: CQATDIRHICHT*THAHMHTHTES
Trigger: AGACTCTGTGTGTGTGTGCATGTGTGCATGTGTGCATGTGTGGCATATGTGCCGTATGTCAGTAGCTTGACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR GCA 72 bp GTAAAGCCTCCATATAAAGCGCTCCCATCATCTCCTTaGCGAGACGGACTGGCAATATTCTTTCTAAAGCCC +
Preference number: 3 (lower is better)
Translates to: VKPPYKALPSSP*RDGLAIFFLKP
Trigger: GGGCTTTAGAAAGAATATTGCCAGTCCGTCTCGGCAAGGAGATGATGGGAGCGCTTTATATGGAGGCTTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CCA 72 bp TCCCTGTCTGCACACTCAACACAATCCATGGGTGCCTaGGTAACAACTAAGTCTGTTCACCATTTCTGTGAG +
Preference number: 3 (lower is better)
Translates to: SLSAHSTQSMGA*VTTKSVHHFCE
Trigger: CTCACAGAAATGGTGAACAGACTTAGTTGTTACCCAGGCACCCATGGATTGTGTTGAGTGTGCAGACAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR TCA 72 bp TCTTCCTTGAACTGCTTGTTCTCCTCCCGTAGCCTCTaGACTTCACCTTGCAGCCTCTTACATTCTTCCATA +
Preference number: 3 (lower is better)
Translates to: SSLNCLFSSRSL*TSPCSLLHSSI
Trigger: TATGGAAGAATGTAAGAGGCTGCAAGGTGAAGTTCAGAGGCTACGGGAGGAGAACAAGCAGTTCAAGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520497.1
3UTR GCA 72 bp GGTTTCATCAGGCTGATAATGGAACATGGGAGAACATaGTGTAAATGGCTCTTTTGGTCTGGACCCTGCAGA +
Preference number: 3 (lower is better)
Translates to: GFIRLIMEHGRT*CKWLFWSGPCR
Trigger: TCTGCAGGGTCCAGACCAAAAGAGCCATTTACAGCATGTTCTCCCATGTTCCATTATCAGCCTGATGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CCA 72 bp CATGATCTCAGAGCTGCTCTTGGTGTTCCAGAAGAGTaGTCGTTGGCCTTATGGGATTTGTATGTCATGAAC +
Preference number: 3 (lower is better)
Translates to: HDLRAALGVPEE*SLALWDLYVMN
Trigger: GTTCATGACATACAAATCCCATAAGGCCAACGACCACTCTTCTGGAACACCAAGAGCAGCTCTGAGATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR TCA 72 bp TGTTTTATTTCAGTCAGACATGGCTTTGGGTATCAGTaGAACGAAGCTCTGACAGCAGCTCCACCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: CFISVRHGFGYQ*NEALTAAPPAE
Trigger: TTCTGCAGGTGGAGCTGCTGTCAGAGCTTCGTTTCACTGATACCCAAAGCCATGTCTGACTGAAATAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR GCA 72 bp TTTGAAAACTGTCAAGCTACTGACATACGGCACATATaGCACACATGCACACATGCACACATGCACACACAC +
Preference number: 3 (lower is better)
Translates to: FENCQATDIRHI*HTCTHAHMHTH
Trigger: GTGTGTGTGCATGTGTGCATGTGTGCATGTGTGGCATATGTGCCGTATGTCAGTAGCTTGACAGTTTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR CAA 90 bp AAGATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGTCTTCCTTGAACTGCTaGTTCTCCTCCCGTAGCCTC +
Preference number: 3 (lower is better)
Translates to: KIVTLYLCVCICVCVCRESSLNC*FSSRSL
Trigger: GAGGCTACGGGAGGAGAACAAGCAGTTCAAGGAAGA...CTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520497.1
3UTR GCA 72 bp TACGGCACATATGCCACACATGCACACATGCACACATaGACACACACACAGAGTCTGTTTTCAAATTCATCT +
Preference number: 3 (lower is better)
Translates to: YGTYATHAHMHT*THTQSLFSNSS
Trigger: AGATGAATTTGAAAACAGACTCTGTGTGTGTGTGCATGTGTGCATGTGTGCATGTGTGGCATATGTGCCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CCA 72 bp CAAAGACATGAGGGCCTGGAAGCTACAGGACTTAACTaGCTGCAGCAACTACAATTAGTAAATTTTAGTCCC +
Preference number: 3 (lower is better)
Translates to: QRHEGLEATGLN*LQQLQLVNFSP
Trigger: GGGACTAAAATTTACTAATTGTAGTTGCTGCAGCCAGTTAAGTCCTGTAGCTTCCAGGCCCTCATGTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR TCA 72 bp AAGAGTGGTCGTTGGCCTTATGGGATTTGTATGTCATaGACTAGAGTCATCCATCTATATACTTTGCAGGGG +
Preference number: 3 (lower is better)
Translates to: KSGRWPYGICMS*TRVIHLYTLQG
Trigger: CCCCTGCAAAGTATATAGATGGATGACTCTAGTTCATGACATACAAATCCCATAAGGCCAACGACCACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR GCA 72 bp GATATGGTGGATCCACCAATCCAATTTACCATCCTGTaGATGCTACCTCTACAAGGCAATCTTCCCAATAAT +
Preference number: 3 (lower is better)
Translates to: DMVDPPIQFTIL*MLPLQGNLPNN
Trigger: ATTATTGGGAAGATTGCCTTGTAGAGGTAGCATGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000520497.1
3UTR-3UTR CAA 90 bp AATTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCACCTCTGAACTTCACCTaGCAGCCTCTTACATTCTTC +
Preference number: 3 (lower is better)
Translates to: NLNPMIWWIHQSNLPSCAPLNFT*QPLTFF
Trigger: GAAGAATGTAAGAGGCTGCAAGGTGAAGTTCAGAGG...TGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520497.1
3UTR CCA 72 bp ATAATATGGAGACAGCTAGTACAAAAGTTTATGCCTTaGCAGGGCAGGTTTCATCAGGCTGATAATGGAACA +
Preference number: 3 (lower is better)
Translates to: IIWRQLVQKFMP*QGRFHQADNGT
Trigger: TGTTCCATTATCAGCCTGATGAAACCTGCCCTGCCAAGGCATAAACTTTTGTACTAGCTGTCTCCATATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR-3UTR CAA 90 bp ATGATAAATTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCAGTCCATCTTCTTCCTaGAACTGCTTGTTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: MINLNPMIWWIHQSNLPSSPSSS*NCLFSS
Trigger: GGAGGAGAACAAGCAGTTCAAGGAAGAAGATGGACT...GGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATTTATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520497.1
3UTR TCA 72 bp TATCTTTCGATAGCAATTCTGTTCCTGGGATTTGTTTaGAAGCGTTTAGGTTTTCACGGATCACTGGAGGTT +
Preference number: 3 (lower is better)
Translates to: YLSIAILFLGFV*KRLGFHGSLEV
Trigger: AACCTCCAGTGATCCGTGAAAACCTAAACGCTTTCAAACAAATCCCAGGAACAGAATTGCTATCGAAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR TCA 72 bp TTCTATCTGACTCAACATAGCCTGCAAACTGGGCAATaGTATCTTTCGATAGCAATTCTGTTCCTGGGATTT +
Preference number: 3 (lower is better)
Translates to: FYLTQHSLQTGQ*YLSIAILFLGF
Trigger: AAATCCCAGGAACAGAATTGCTATCGAAAGATATCATTGCCCAGTTTGCAGGCTATGTTGAGTCAGATAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR GCA 72 bp GTATGTCATGAACTAGAGTCATCCATCTATATACTTTaGAGGGGCCTTTCTAAATACAATTCCATTCCAGCT +
Preference number: 3 (lower is better)
Translates to: VCHELESSIYIL*RGLSKYNSIPA
Trigger: AGCTGGAATGGAATTGTATTTAGAAAGGCCCCTGCAAAGTATATAGATGGATGACTCTAGTTCATGACATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR TCA 72 bp AGAAAGCGATTCTCCCACAGTACTGTTTTATTCAACTaGCATCTTTTAATCAAAGCAATCCATATCGTGGCA +
Preference number: 3 (lower is better)
Translates to: RKRFSHSTVLFN*HLLIKAIHIVA
Trigger: TGCCACGATATGGATTGCTTTGATTAAAAGATGTCAGTTGAATAAAACAGTACTGTGGGAGAATCGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CCA 72 bp TTACACATGGTTATGATAAATTTAAATCCCATGATATaGTGGATCCACCAATCCAATTTACCATCCTGTGCA +
Preference number: 3 (lower is better)
Translates to: LHMVMINLNPMI*WIHQSNLPSCA
Trigger: TGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATTTATCATAACCATGTGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS-3UTR TCA 90 bp CGGGAGTGGGCCACGTGGGGACTACTGTGTGGAGCTGACCGCACTCCCCAGCATCAGGGCCGCCCTCTCTaGGGTGCTGTGGAGCCAGTA +
Preference number: 4 (lower is better)
Translates to: REWATWGLLCGADRTPQHQGRPL*GAVEPV
Trigger: TACTGGCTCCACAGCACCTCAGAGAGGGCGGCCCTG...ATGCTGGGGAGTGCGGTCAGCTCCACACAGTAGTCCCCACGTGGCCCACTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp GGGCCACGTGGGGACTACTGTGTGGAGCTGACCGCACTCCCCAGCATGCTGGGCGACGGGCAGAGTAGCTaGGGCAGGAAGGCCTCATCC +
Preference number: 4 (lower is better)
Translates to: GPRGDYCVELTALPSMLGDGQSS*GRKASS
Trigger: GGATGAGGCCTTCCTGCCTCAGCTACTCTGCCCGTC...GCCCAGCATGCTGGGGAGTGCGGTCAGCTCCACACAGTAGTCCCCACGTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp GGGCCACGTGGGGACTACTGTGTGGAGCTGACCGCACTCCCCAGCATGCTGGGCCGGGAGTGGGCCACGTaGGGACTACTGTGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GPRGDYCVELTALPSMLGREWAT*GLLCGA
Trigger: AGCTCCACACAGTAGTCCCCACGTGGCCCACTCCCG...GCCCAGCATGCTGGGGAGTGCGGTCAGCTCCACACAGTAGTCCCCACGTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR CCA 90 bp CACCTCCACATGACCAGACTCTCCAGAGACAGAGGAGCCCACAGCCCTCCAGCAACACGGAAAGCAGCCTaGGCCGGGAGTGGGCCACGT +
Preference number: 4 (lower is better)
Translates to: HLHMTRLSRDRGAHSPPATRKAA*AGSGPR
Trigger: ACGTGGCCCACTCCCGGCCCAGGCTGCTTTCCGTGT...TGCTGGAGGGCTGTGGGCTCCTCTGTCTCTGGAGAGTCTGGTCATGTGGAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR CCA 90 bp CTTGCTCCCCACCCACAACTGCTGGTGCCCTCGCTTCTAACCCTCTGCAGCCCGGGTCAGGCTCAGACTTaGACCTGGGCGCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LAPHPQLLVPSLLTLCSPGQAQT*TWALEV
Trigger: CACTTCCAGCGCCCAGGTCCAAGTCTGAGCCTGACC...CGGGCTGCAGAGGGTTAGAAGCGAGGGCACCAGCAGTTGTGGGTGGGGAGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR TCA 90 bp TGTCCTGACTCCAGGCTAGGTCCCCAAGGGGAGGTCAGGCTCAGACTTGGACCTTGGCACAGGGGTGGGTaGGCTTGTGCAGCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: CPDSRLGPQGEVRLRLGPWHRGG*ACAAQL
Trigger: TAGCTGAGCTGCACAAGCTCACCCACCCCTGTGCCA...AGGTCCAAGTCTGAGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp GATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTGGGCCGGGAGTGGGCCTCGAGGCTCAGGACCTaGTCCACCTTCGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: DGLDRTEDTESSLGREWASRLRT*STFAMF
Trigger: GAACATGGCGAAGGTGGAGCAGGTCCTGAGCCTCGA...GGCCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR GCA 90 bp GATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTGGGCCGGGAGTGGGCCAATTTGAGCTCGTGCTaGGGCTCGAGGCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: DGLDRTEDTESSLGREWANLSSC*GSRLRT
Trigger: GGTCCTGAGCCTCGAGCCGCAGCACGAGCTCAAATT...GGCCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR GCA 90 bp CCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACGCACCGCACTCCCCAGCATaGTGGGCTCCAGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: PQPSSSNTSSPNRVQQHAPHSPA*WAPAPQ
Trigger: TTGGGGAGCTGGAGCCCAGCATGCTGGGGAGTGCGG...TGCGTGCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR GCA 90 bp CAGAAACTCAATTCGCGTAGGGCCAGCATGATCTCAGAGCTGCTCTTGGTGTTCGGTCGGTCTACGCGGTaGAGGCGCAGGGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: QKLNSRRASMISELLLVFGRSTR*RRRGGG
Trigger: CCCTCCGCCCCTGCGCCTGCACCGCGTAGACCGACC...GAACACCAAGAGCAGCTCTGAGATCATGCTGGCCCTACGCGAATTGAGTTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp CCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACGCACACTCCCCAGCATGCTaGGCTCCAGCTCCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: PQPSSSNTSSPNRVQQHAHSPAC*APAPQG
Trigger: CCCTTGGGGAGCTGGAGCCCAGCATGCTGGGGAGTG...TGCGTGCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR TCA 90 bp GGGCCACGTGGGGACTACTGTGTGGAGCTGACCGCACTCCCCAGCATGCTGGGCTATGACGAGTACGTCTaGTGCTGCCACAGTGCAATT +
Preference number: 4 (lower is better)
Translates to: GPRGDYCVELTALPSMLGYDEYV*CCHSAI
Trigger: AATTGCACTGTGGCAGCATCAGACGTACTCGTCATA...GCCCAGCATGCTGGGGAGTGCGGTCAGCTCCACACAGTAGTCCCCACGTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR TCA 90 bp CGGGAGTGGGCCACGTGGGGACTACTGTGTGGAGCTGACCGCACTCCCCAGCATGGCTTTGGGTATCAGTaGAACGAAGCTCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: REWATWGLLCGADRTPQHGFGYQ*NEALTA
Trigger: TGCTGTCAGAGCTTCGTTTCACTGATACCCAAAGCC...ATGCTGGGGAGTGCGGTCAGCTCCACACAGTAGTCCCCACGTGGCCCACTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp CCAGAGACAGAGGAGCCCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGCGGAATTTGAGCTCGTaGTGCGGCTCGAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PETEEPTALQQQYQFTQQRNLSS*CGSRLR
Trigger: CCTGAGCCTCGAGCCGCAGCACGAGCTCAAATTCCG...CTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGGGCTCCTCTGTCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR GCA 90 bp GATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTGGGCCGGGAGTGGGCCGTCCTCTCAAACCTGTaGACAGTGGGACTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: DGLDRTEDTESSLGREWAVLSNL*TVGLCP
Trigger: TGGGCACAGTCCCACTGTGCACAGGTTTGAGAGGAC...GGCCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp CGGGAGTGGGCCACGTGGGGACTACTGTGTGGAGCTGACCGCACTCCCCAGCATCTAGTCTCAATGGCATaGTTCCCTGACCTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: REWATWGLLCGADRTPQHLVSMA*FPDLEG
Trigger: CCCTTCTAGGTCAGGGAACCATGCCATTGAGACTAG...ATGCTGGGGAGTGCGGTCAGCTCCACACAGTAGTCCCCACGTGGCCCACTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp CTGATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTGGGCCGGGAGTGGGAACCCCACCTCCACATaGCCAGACTCTCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: LMAWTELKTRKAAWAGSGNPTST*PDSPET
Trigger: TGTCTCTGGAGAGTCTGGTCATGTGGAGGTGGGGTT...CCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR TCA 90 bp ATTTGTCCTGACTCCAGGCTAGGTCCCCAAGGGGAGGTCAGGCTCAGACTTGGACAGGGCAGGCCGTTGTaGCAGGCCCCATATTCACCT +
Preference number: 4 (lower is better)
Translates to: ICPDSRLGPQGEVRLRLGQGRPL*QAPYSP
Trigger: AGGTGAATATGGGGCCTGTCACAACGGCCTGCCCTG...TCCAAGTCTGAGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp CATAGTTCAGTTTGGTTCTTTCTCCTTCTTCAGGCCAGACAGCCGGGGGCAGGGCCCCTGGCACAGGGGTaGGTGAGCTTGTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: HSSVWFFLLLQARQPGAGPLAQG*VSLCSS
Trigger: TGAGCTGCACAAGCTCACCCACCCCTGTGCCAGGGG...CCCTGCCCCCGGCTGTCTGGCCTGAAGAAGGAGAAAGAACCAAACTGAACTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp ATTTGTCCTGACTCCAGGCTAGGTCCCCAAGGGGAGGTCAGGCTCAGACTTGGATCCTCCCGTAGCCTCTaGACTTCACCTTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ICPDSRLGPQGEVRLRLGSSRSL*TSPCSL
Trigger: GAGGCTGCAAGGTGAAGTTCAGAGGCTACGGGAGGA...TCCAAGTCTGAGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp CTGATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTGGGCCGGGAGTGGGTCGCTTCTAACCCTCTaGAGCCCGATCCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: LMAWTELKTRKAAWAGSGSLLTL*SPIHLS
Trigger: GGACAAATGGATCGGGCTGCAGAGGGTTAGAAGCGA...CCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR GCA 90 bp CTGATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTGGGCCGGGAGTGGGGGCCCTTCAATGAAATaGCATCTCCAGCAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: LMAWTELKTRKAAWAGSGGPSMK*HLQQGE
Trigger: TTCCCCCTGCTGGAGATGGCATTTCATTGAAGGGCC...CCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp TGTCCTGACTCCAGGCTAGGTCCCCAAGGGGAGGTCAGGCTCAGACTTGGACCTCTCCCATCATCTCCTTaGCGAGACGGACTGGCAATA +
Preference number: 4 (lower is better)
Translates to: CPDSRLGPQGEVRLRLGPLPSSP*RDGLAI
Trigger: TATTGCCAGTCCGTCTCGGCAAGGAGATGATGGGAG...AGGTCCAAGTCTGAGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp CCTTCTTCCTTCCCAGTTGGGGCTAATGCTGAAATGGGGCTGTTGCTCTGCACTCGGAATTTGAGCTCGTaGTGCGGCTCGAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PSSFPVGANAEMGLLLCTRNLSS*CGSRLR
Trigger: CCTGAGCCTCGAGCCGCAGCACGAGCTCAAATTCCG...AGTGCAGAGCAACAGCCCCATTTCAGCATTAGCCCCAACTGGGAAGGAAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520497.1
CDS-3UTR GCA 90 bp TGTCCTGACTCCAGGCTAGGTCCCCAAGGGGAGGTCAGGCTCAGACTTGGACCTCTGAAATGGGGCTGTTaGTCTGCACTGTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: CPDSRLGPQGEVRLRLGPLKWGC*SALSSS
Trigger: TGAGGAAGACAGTGCAGAGCAACAGCCCCATTTCAG...AGGTCCAAGTCTGAGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR GCA 90 bp CTGATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTGGGCCGGGAGTGGGCTGAAATGGGGCTGTTaGTCTGCACTGTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LMAWTELKTRKAAWAGSGLKWGC*SALSSS
Trigger: TGAGGAAGACAGTGCAGAGCAACAGCCCCATTTCAG...CCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR GCA 90 bp CTGATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTGGGCCGGGAGTGGGGGGTGGGTGAGCTTGTaGAGCTCAGCTAATGTTCTA +
Preference number: 4 (lower is better)
Translates to: LMAWTELKTRKAAWAGSGGWVSL*SSANVL
Trigger: TAGAACATTAGCTGAGCTGCACAAGCTCACCCACCC...CCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATCAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp CAGAAACTCAATTCGCGTAGGGCCAGCATGATCTCAGAGCTGCTCTTGGTGTTCGACAGCAGCTCCACCTaGAGAAGGCCAGGCGCACTC +
Preference number: 4 (lower is better)
Translates to: QKLNSRRASMISELLLVFDSSST*RRPGAL
Trigger: GAGTGCGCCTGGCCTTCTGCAGGTGGAGCTGCTGTC...GAACACCAAGAGCAGCTCTGAGATCATGCTGGCCCTACGCGAATTGAGTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp GATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTGGGCCGGGAGTGGGCCCACAGATACATTAATTaGGGCCCCTGCATCGATGAT +
Preference number: 4 (lower is better)
Translates to: DGLDRTEDTESSLGREWAHRYIN*GPCIDD
Trigger: ATCATCGATGCAGGGGCCTCAATTAATGTATCTGTG...GGCCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp TCCATTTGTCCTGACTCCAGGCTAGGTCCCCAAGGGGAGGTCAGGCTCAGACTTTGGCTTGGACAGAACTaGAGACACGGAAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SICPDSRLGPQGEVRLRLWLGQN*RHGKQP
Trigger: AGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCA...AAGTCTGAGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACAAATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR TCA 90 bp CACCTCCACATGACCAGACTCTCCAGAGACAGAGGAGCCCACAGCCCTCCAGCAGAGGCTGCTTTTTACTaGAGGCCAAAGCAATGGAAG +
Preference number: 4 (lower is better)
Translates to: HLHMTRLSRDRGAHSPPAEAAFY*RPKQWK
Trigger: CTTCCATTGCTTTGGCCTTCAGTAAAAAGCAGCCTC...TGCTGGAGGGCTGTGGGCTCCTCTGTCTCTGGAGAGTCTGGTCATGTGGAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp ATTTGTCCTGACTCCAGGCTAGGTCCCCAAGGGGAGGTCAGGCTCAGACTTGGACTCCTATCAAAGACATaGGGGCCTGGAAGCTACAGG +
Preference number: 4 (lower is better)
Translates to: ICPDSRLGPQGEVRLRLGLLSKT*GPGSYR
Trigger: CCTGTAGCTTCCAGGCCCTCATGTCTTTGATAGGAG...TCCAAGTCTGAGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp CCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACGCAACTTGCCCTCTTTGCTaGTATCCTGGAGAACCGCAG +
Preference number: 4 (lower is better)
Translates to: PQPSSSNTSSPNRVQQHATCPLC*YPGEPQ
Trigger: CTGCGGTTCTCCAGGATATCAGCAAAGAGGGCAAGT...TGCGTGCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp GATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTGGGCCGGGAGTGGGCCCAATTTACCATCCTGTaGATGCTACCTCTACAAGGC +
Preference number: 4 (lower is better)
Translates to: DGLDRTEDTESSLGREWAQFTIL*MLPLQG
Trigger: GCCTTGTAGAGGTAGCATGCACAGGATGGTAAATTG...GGCCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR CCA 90 bp CGGGAGTGGGCCACGTGGGGACTACTGTGTGGAGCTGACCGCACTCCCCAGCATTACAATATGCCATTGTaGCATTACTCATGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: REWATWGLLCGADRTPQHYNMPL*HYSWFP
Trigger: GGGAAACCATGAGTAATGCCACAATGGCATATTGTA...ATGCTGGGGAGTGCGGTCAGCTCCACACAGTAGTCCCCACGTGGCCCACTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR CCA 90 bp CCACCAATCCAATTTACCATCCTGTGCATGCTACCTCTACAAGGCAATCTTCCCACACGGAAAGCAGCCTaGGCCGGGAGTGGGCCACGT +
Preference number: 4 (lower is better)
Translates to: PPIQFTILCMLPLQGNLPTRKAA*AGSGPR
Trigger: ACGTGGCCCACTCCCGGCCCAGGCTGCTTTCCGTGT...GGGAAGATTGCCTTGTAGAGGTAGCATGCACAGGATGGTAAATTGGATTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395802.7
CDS-3UTR CCA 90 bp GGGCCACGTGGGGACTACTGTGTGGAGCTGACCGCACTCCCCAGCATGCTGGGCATAGTCAAACAGAACTaGGTTGGTCTTTTATGGCAT +
Preference number: 4 (lower is better)
Translates to: GPRGDYCVELTALPSMLGIVKQN*VGLLWH
Trigger: ATGCCATAAAAGACCAACCCAGTTCTGTTTGACTAT...GCCCAGCATGCTGGGGAGTGCGGTCAGCTCCACACAGTAGTCCCCACGTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR TCA 90 bp TCCATTTGTCCTGACTCCAGGCTAGGTCCCCAAGGGGAGGTCAGGCTCAGACTTTTCGTCCCGATTATCTaGCTCTTAACCCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SICPDSRLGPQGEVRLRLFVPII*LLTLLG
Trigger: CCCCAAGAGGGTTAAGAGTCAGATAATCGGGACGAA...AAGTCTGAGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACAAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp GGCCAAAGCAATGGAAGGCCAAGGGTGACCAGGTGCTCAGCTTTTTCAGCAGTTCAGAGCAGATCTGTCTaGGGAAAAGGGGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GQSNGRPRVTRCSAFSAVQSRSV*GKGARE
Trigger: TTCCCTGGCCCCTTTTCCTCAGACAGATCTGCTCTG...AACTGCTGAAAAAGCTGAGCACCTGGTCACCCTTGGCCTTCCATTGCTTTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp CTTGCTCCCCACCCACAACTGCTGGTGCCCTCGCTTCTAACCCTCTGCAGCCCGGGTAAGGAGTGGCATTaGAACAACAGTAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: LAPHPQLLVPSLLTLCSPGKEWH*NNSNFL
Trigger: AAGAAAGTTACTGTTGTTTCAATGCCACTCCTTACC...CGGGCTGCAGAGGGTTAGAAGCGAGGGCACCAGCAGTTGTGGGTGGGGAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp CTCTCCAGAGACAGAGGAGCCCACAGCCCTCCAGCAGCAATACCAGTTCACCCACATCCATTAGCCAAGTaGTTACATCTCCATCAGCCC +
Preference number: 4 (lower is better)
Translates to: LSRDRGAHSPPAAIPVHPHPLAK*LHLHQP
Trigger: GGGCTGATGGAGATGTAATCACTTGGCTAATGGATG...TGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGGGCTCCTCTGTCTCTGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp GTGTGTGCAGGGAGGGGTAATTTAAAGGCAAGACCTGTGAGATGTCATCATACACCGCACTCCCCAGCATaGTGGGCTCCAGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: VCAGRGNLKARPVRCHHTPHSPA*WAPAPQ
Trigger: TTGGGGAGCTGGAGCCCAGCATGCTGGGGAGTGCGG...TGTATGATGACATCTCACAGGTCTTGCCTTTAAATTACCCCTCCCTGCACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR GCA 90 bp TCCATTTGTCCTGACTCCAGGCTAGGTCCCCAAGGGGAGGTCAGGCTCAGACTTCTGATGCTGCCACAGTaGAATTCCTTTGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SICPDSRLGPQGEVRLRLLMLPQ*NSFGLL
Trigger: CAGAAGCCCAAAGGAATTGCACTGTGGCAGCATCAG...AAGTCTGAGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACAAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR GCA 90 bp GATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTGGGCCGGGAGTGGGCCATCAGTATGTATTACTaGTGGTGCCAGCAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: DGLDRTEDTESSLGREWAISMYY*WCQQFR
Trigger: TCTGAACTGCTGGCACCAGCAGTAATACATACTGAT...GGCCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp GATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTGGGCCGGGAGTGGGCCTGGTCGTTGGCCTTATaGGATTTGTATGTCATGAAC +
Preference number: 4 (lower is better)
Translates to: DGLDRTEDTESSLGREWAWSLAL*DLYVMN
Trigger: GTTCATGACATACAAATCCCATAAGGCCAACGACCA...GGCCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CAA 72 bp AATTCGCGTAGGGCCAGCATGATCTCAGAGCTGCTCTaGGTGTTCCAGAAGAGTGGTCGTTGGCCTTATGGG +
Preference number: 4 (lower is better)
Translates to: NSRRASMISELL*VFQKSGRWPYG
Trigger: CCCATAAGGCCAACGACCACTCTTCTGGAACACCAAGAGCAGCTCTGAGATCATGCTGGCCCTACGCGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CAA 72 bp TCCTTCCCAGTTGGGGCTAATGCTGAAATGGGGCTGTaGCTCTGCACTGTCTTCCTCATCCGCAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: SFPVGANAEMGL*LCTVFLIRSPS
Trigger: AGATGGACTGCGGATGAGGAAGACAGTGCAGAGCAACAGCCCCATTTCAGCATTAGCCCCAACTGGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520497.1
CDS-3UTR TCA 90 bp GTTGCTCTGCACTGTCTTCCTCATCCGCAGTCCATCTTCTTCCTTGAACTGCTTTCCTCCCGTAGCCTCTaGACTTCACCTTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VALHCLPHPQSIFFLELLSSRSL*TSPCSL
Trigger: GAGGCTGCAAGGTGAAGTTCAGAGGCTACGGGAGGA...AAGCAGTTCAAGGAAGAAGATGGACTGCGGATGAGGAAGACAGTGCAGAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520497.1
CDS-3UTR TCA 90 bp CCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCATGCTACCTCACTACTGTGTGGAGCTaGCCGCACTCCCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: PMIWWIHQSNLPSCACYLTTVWS*PHSPAC
Trigger: GCATGCTGGGGAGTGCGGTCAGCTCCACACAGTAGT...GAGGTAGCATGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395802.7
CDS-3UTR TCA 90 bp TCCCAAGGAGCTGATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTGGGCATTCCTTTGGGCTTCTaGCTCTGTTCATCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SQGADGLDRTEDTESSLGIPLGF*LCSSVP
Trigger: TGGGACTGATGAACAGAGTCAGAAGCCCAAAGGAAT...GCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATCAGCTCCTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR TCA 90 bp CTTGCTCCCCACCCACAACTGCTGGTGCCCTCGCTTCTAACCCTCTGCAGCCCGAGGCCTTACAGAGACTaGTTTAGTTCTAAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LAPHPQLLVPSLLTLCSPRPYRD*FSSKKL
Trigger: CAACTTTTTAGAACTAAATCAGTCTCTGTAAGGCCT...CGGGCTGCAGAGGGTTAGAAGCGAGGGCACCAGCAGTTGTGGGTGGGGAGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp CCAGAGACAGAGGAGCCCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGCTCGGTGTATCATCTTaGGTCACCTTACTTAGGCTA +
Preference number: 4 (lower is better)
Translates to: PETEEPTALQQQYQFTQQLGVSS*VTLLRL
Trigger: TAGCCTAAGTAAGGTGACTCAAGATGATACACCGAG...CTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGGGCTCCTCTGTCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp CTCTGCACTGTCTTCCTCATCCGCAGTCCATCTTCTTCCTTGAACTGCTTGTTCTCGAGGCTCAGGACCTaGTCCACCTTCGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: LCTVFLIRSPSSSLNCLFSRLRT*STFAMF
Trigger: GAACATGGCGAAGGTGGAGCAGGTCCTGAGCCTCGA...GAACAAGCAGTTCAAGGAAGAAGATGGACTGCGGATGAGGAAGACAGTGCAGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520497.1
CDS-3UTR GCA 90 bp GGAGCCCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCCAATTTACCATCCTGTaGATGCTACCTCTACAAGGC +
Preference number: 4 (lower is better)
Translates to: GAHSPPAAIPVHPTEFSSQFTIL*MLPLQG
Trigger: GCCTTGTAGAGGTAGCATGCACAGGATGGTAAATTG...GCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR GCA 90 bp CAGAAACTCAATTCGCGTAGGGCCAGCATGATCTCAGAGCTGCTCTTGGTGTTCTGCACAGTGGGACTGTaGCCAGAACGCCCGTTACTA +
Preference number: 4 (lower is better)
Translates to: QKLNSRRASMISELLLVFCTVGL*PERPLL
Trigger: TAGTAACGGGCGTTCTGGGCACAGTCCCACTGTGCA...GAACACCAAGAGCAGCTCTGAGATCATGCTGGCCCTACGCGAATTGAGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp CTTGCTCCCCACCCACAACTGCTGGTGCCCTCGCTTCTAACCCTCTGCAGCCCGAGGTATTTTGTATCGTaGCAAGGAAGCTTAAGTTAC +
Preference number: 4 (lower is better)
Translates to: LAPHPQLLVPSLLTLCSPRYFVS*QGSLSY
Trigger: GTAACTTAAGCTTCCTTGGCACGATACAAAATACCT...CGGGCTGCAGAGGGTTAGAAGCGAGGGCACCAGCAGTTGTGGGTGGGGAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp CACCTCCACATGACCAGACTCTCCAGAGACAGAGGAGCCCACAGCCCTCCAGCAGAACATGGGAGAACATaGTGTAAATGGCTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: HLHMTRLSRDRGAHSPPAEHGRT*CKWLFW
Trigger: CCAAAAGAGCCATTTACAGCATGTTCTCCCATGTTC...TGCTGGAGGGCTGTGGGCTCCTCTGTCTCTGGAGAGTCTGGTCATGTGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp CCAGAGACAGAGGAGCCCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGAAAGACATGAGGGCCTaGAAGCTACAGGACTTAACT +
Preference number: 4 (lower is better)
Translates to: PETEEPTALQQQYQFTQQKDMRA*KLQDLT
Trigger: AGTTAAGTCCTGTAGCTTCCAGGCCCTCATGTCTTT...CTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGGGCTCCTCTGTCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp CCAGAGACAGAGGAGCCCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGCAGAAGAGTGGTCGTTaGCCTTATGGGATTTGTATG +
Preference number: 4 (lower is better)
Translates to: PETEEPTALQQQYQFTQQQKSGR*PYGICM
Trigger: CATACAAATCCCATAAGGCCAACGACCACTCTTCTG...CTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGGGCTCCTCTGTCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp CTCTCCAGAGACAGAGGAGCCCACAGCCCTCCAGCAGCAATACCAGTTCACCCACAAAAGTTTATGCCTTaGCAGGGCAGGTTTCATCAG +
Preference number: 4 (lower is better)
Translates to: LSRDRGAHSPPAAIPVHPQKFMP*QGRFHQ
Trigger: CTGATGAAACCTGCCCTGCCAAGGCATAAACTTTTG...TGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGGGCTCCTCTGTCTCTGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CAA 72 bp TGTCGGCTGACGCTCCTTATCAGGGGCTTCTATTACTaGCCCTCTTTGCTGATATCCTGGAGAACCGCAGTG +
Preference number: 4 (lower is better)
Translates to: CRLTLLIRGFYY*PSLLISWRTAV
Trigger: CACTGCGGTTCTCCAGGATATCAGCAAAGAGGGCAAGTAATAGAAGCCCCTGATAAGGAGCGTCAGCCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp TCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACGCAGCATTAACTTGGGCGCTGGAAGTGTaGGTAATGGTTGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSSNTSSPNRVQQHAALTWALEV*VMVERW
Trigger: CCACCTCTCAACCATTACTCACACTTCCAGCGCCCA...AGTTAATGCTGCGTGCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR GCA 90 bp GGAGCCCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACAGTACCTACGTGGTaGTGTAGTCTTCACCTTAAA +
Preference number: 4 (lower is better)
Translates to: GAHSPPAAIPVHPTEFSSTVPTW*CSLHLK
Trigger: TTTAAGGTGAAGACTACAGCACCACGTAGGTACTGT...GCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR GCA 90 bp AGCCGGGTGCTAAGGCCTTCTTCCTTCCCAGTTGGGGCTAATGCTGAAATGGGGCAATTTACCATCCTGTaGATGCTACCTCTACAAGGC +
Preference number: 4 (lower is better)
Translates to: SRVLRPSSFPVGANAEMGQFTIL*MLPLQG
Trigger: GCCTTGTAGAGGTAGCATGCACAGGATGGTAAATTG...CCCCATTTCAGCATTAGCCCCAACTGGGAAGGAAGAAGGCCTTAGCACCCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520497.1
CDS-3UTR GCA 90 bp TCTGAAAGGCTCTGTAGCTCTGAGCTCTCACTACATTCAGTTCTATCTGACTCACTCCCCCATGCACACTaGCCAGCGGCATCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: SERLCSSELSLHSVLSDSLPHAH*PAASSL
Trigger: TAGGGAGGATGCCGCTGGGCAGTGTGCATGGGGGAG...TGAGTCAGATAGAACTGAATGTAGTGAGAGCTCAGAGCTACAGAGCCTTTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp AACAAAGCACTGCCATTTATTTCCAAAGCGCTGGGTCAATCAGTCAACACACGCCCGCCCTCTCTGAGGTaGTGTGGAGCCAGTAACCAC +
Preference number: 4 (lower is better)
Translates to: NKALPFISKALGQSVNTRPPSLR*CGASNH
Trigger: GTGGTTACTGGCTCCACAGCACCTCAGAGAGGGCGG...GCGTGTGTTGACTGATTGACCCAGCGCTTTGGAAATAAATGGCAGTGCTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp TCCATTTGTCCTGACTCCAGGCTAGGTCCCCAAGGGGAGGTCAGGCTCAGACTTCAATCCATGGGTGCCTaGGTAACAACTAAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: SICPDSRLGPQGEVRLRLQSMGA*VTTKSV
Trigger: AACAGACTTAGTTGTTACCCAGGCACCCATGGATTG...AAGTCTGAGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACAAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp CCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACGCACATCTCCATCAGCCCTaGGGTGTAATAAAGCAATTG +
Preference number: 4 (lower is better)
Translates to: PQPSSSNTSSPNRVQQHAHLHQP*GVIKQL
Trigger: CAATTGCTTTATTACACCCCAGGGCTGATGGAGATG...TGCGTGCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp CCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACGCACTTGGTCCCTTTAAGTaGACAAAGCACTGCCATTTA +
Preference number: 4 (lower is better)
Translates to: PQPSSSNTSSPNRVQQHALGPFK*TKHCHL
Trigger: TAAATGGCAGTGCTTTGTTCACTTAAAGGGACCAAG...TGCGTGCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR TCA 90 bp GGAGCCCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACATTCAGTTCTATCTaGCTCAACATAGCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GAHSPPAAIPVHPTEFSSTFSSI*LNIACK
Trigger: TTTGCAGGCTATGTTGAGTCAGATAGAACTGAATGT...GCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp CAGAAACTCAATTCGCGTAGGGCCAGCATGATCTCAGAGCTGCTCTTGGTGTTCTTCAGGTGTTCAAAGTaGCACTGGGAAGCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: QKLNSRRASMISELLLVFFRCSK*HWEAQD
Trigger: GTCTTGGGCTTCCCAGTGTCACTTTGAACACCTGAA...GAACACCAAGAGCAGCTCTGAGATCATGCTGGCCCTACGCGAATTGAGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp TCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACGCAGCATTAACTTTCGGTCTGTCGGGTTaGCAAGCTTTAGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SSSNTSSPNRVQQHAALTFGLSG*QALGWW
Trigger: CCACCAACCTAAAGCTTGGCAACCCGACAGACCGAA...AGTTAATGCTGCGTGCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR GCA 90 bp GGCCAAAGCAATGGAAGGCCAAGGGTGACCAGGTGCTCAGCTTTTTCAGCAGTTTCTTCTTCCTTGAACTaGTTGTTCTCCTCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: GQSNGRPRVTRCSAFSAVSSSLN*LFSSRS
Trigger: GCTACGGGAGGAGAACAAGCAGTTCAAGGAAGAAGA...AACTGCTGAAAAAGCTGAGCACCTGGTCACCCTTGGCCTTCCATTGCTTTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp CAGAAACTCAATTCGCGTAGGGCCAGCATGATCTCAGAGCTGCTCTTGGTGTTCTCCAGGAGCCACGCGTaGTCCACATTCTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: QKLNSRRASMISELLLVFSRSHA*STFFLF
Trigger: GAAAAGAAAGAATGTGGAGCACGCGTGGCTCCTGGA...GAACACCAAGAGCAGCTCTGAGATCATGCTGGCCCTACGCGAATTGAGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp CACCTCCACATGACCAGACTCTCCAGAGACAGAGGAGCCCACAGCCCTCCAGCAAATCCCATGATATGGTaGATCCACCAATCCAATTTA +
Preference number: 4 (lower is better)
Translates to: HLHMTRLSRDRGAHSPPANPMIW*IHQSNL
Trigger: TAAATTGGATTGGTGGATCCACCATATCATGGGATT...TGCTGGAGGGCTGTGGGCTCCTCTGTCTCTGGAGAGTCTGGTCATGTGGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR CCA 90 bp GGAGCCCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCTACAATATGCCATTGTaGCATTACTCATGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GAHSPPAAIPVHPTEFSSYNMPL*HYSWFP
Trigger: GGGAAACCATGAGTAATGCCACAATGGCATATTGTA...GCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR CCA 90 bp CCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACGCAACATGGGAAAAATCCTaGAGACGAATTCCTATTGGG +
Preference number: 4 (lower is better)
Translates to: PQPSSSNTSSPNRVQQHATWEKS*RRIPIG
Trigger: CCCAATAGGAATTCGTCTCCAGGATTTTTCCCATGT...TGCGTGCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp CCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACGCAGCTACAGGACTTAACTaGCTGCAGCAACTACAATTA +
Preference number: 4 (lower is better)
Translates to: PQPSSSNTSSPNRVQQHAATGLN*LQQLQL
Trigger: TAATTGTAGTTGCTGCAGCCAGTTAAGTCCTGTAGC...TGCGTGCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp TCCATTTGTCCTGACTCCAGGCTAGGTCCCCAAGGGGAGGTCAGGCTCAGACTTAGTATGTATTACTGCTaGTGCCAGCAGTTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SICPDSRLGPQGEVRLRLSMYYC*CQQFRR
Trigger: TCTTCTGAACTGCTGGCACCAGCAGTAATACATACT...AAGTCTGAGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACAAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp CACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACGCAGTGTAAATGGCTCTTTTaGTCTGGACCCTGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: HSPPAAIPVHPTEFSSTQCKWLF*SGPCRN
Trigger: ATTTCTGCAGGGTCCAGACCAAAAGAGCCATTTACA...CTGCGTGCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CAA 72 bp GGGACACATGGGAAAAATCCTGGAGACGAATTCCTATaGGGGTGGCCTCCCTGTCTGCACACTCAACACAAT +
Preference number: 4 (lower is better)
Translates to: GTHGKNPGDEFL*GWPPCLHTQHN
Trigger: ATTGTGTTGAGTGTGCAGACAGGGAGGCCACCCCAATAGGAATTCGTCTCCAGGATTTTTCCCATGTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp GATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCATGCTACCTCTACAACCGATCCATTTGTCCTaGCTCCAGGCTAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: DMVDPPIQFTILCMLPLQPIHLS*LQARSP
Trigger: TGGGGACCTAGCCTGGAGTCAGGACAAATGGATCGG...TTGTAGAGGTAGCATGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395802.7
CDS-3UTR TCA 90 bp ATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGTATGGCTGGCATTTCTaGAGCCAGGGCCGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: IVTLYLCVCICVCVCREGYGWHF*SQGRPL
Trigger: GAGAGGGCGGCCCTGGCTTCAGAAATGCCAGCCATA...CCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp TACTGCTGGTGCCAGCAGTTCAGAAGACGAGAGAAGGAAAACATGCAAACTAGGATTCAGGGAAAGGCCTaGGACATCAGCAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: YCWCQQFRRREKENMQTRIQGKA*DISSSA
Trigger: AGCTGAGCTGCTGATGTCTCAGGCCTTTCCCTGAAT...CCTAGTTTGCATGTTTTCCTTCTCTCGTCTTCTGAACTGCTGGCACCAGCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp CCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCATGCTACCTCGTTTCTCTCTTCCCTTaGTCCCCACCCACAACTGCT +
Preference number: 4 (lower is better)
Translates to: PMIWWIHQSNLPSCACYLVSLFP*SPPTTA
Trigger: AGCAGTTGTGGGTGGGGAGCAAGGGAAGAGAGAAAC...GAGGTAGCATGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395802.7
CDS-3UTR GCA 90 bp TCGCTCTTTCCATGCCAGTTTCGTCCCGATTATCTGACTCTTAACCCTCTTGGGGTGGCAGAAGGCACATaGCTTACAGCTCGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: SLFPCQFRPDYLTLNPLGVAEGT*LTARSF
Trigger: AAAAGACCGAGCTGTAAGGCATGTGCCTTCTGCCAC...CCCAAGAGGGTTAAGAGTCAGATAATCGGGACGAAACTGGCATGGAAAGAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp TTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGTAATCACTCCCCAGCATGCTaGGCTCCAGCTCCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LHYICVCVSVYVCAGRGNHSPAC*APAPQG
Trigger: CCCTTGGGGAGCTGGAGCCCAGCATGCTGGGGAGTG...ATTACCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR CCA 90 bp GCATGCTACCTCTACAAGGCAATCTTCCCAATAATTACACCAACGATAAAGAACCGGGAGTGGGCCACGTaGGGACTACTGTGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: ACYLYKAIFPIITPTIKNREWAT*GLLCGA
Trigger: AGCTCCACACAGTAGTCCCCACGTGGCCCACTCCCG...GTTCTTTATCGTTGGTGTAATTATTGGGAAGATTGCCTTGTAGAGGTAGCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395802.7
CDS-3UTR CCA 90 bp AAAGGTAACCTAGAGTTGACTGTCACTACTGAGAATTTCCCTCCCTATGACAGTGGTCAGGCTCAGACTTaGACCTGGGCGCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: KGNLELTVTTENFPPYDSGQAQT*TWALEV
Trigger: CACTTCCAGCGCCCAGGTCCAAGTCTGAGCCTGACC...ACTGTCATAGGGAGGGAAATTCTCAGTAGTGACAGTCAACTCTAGGTTACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR CCA 90 bp AGGCACGATTTGAAAACTGTCAAGCTACTGACATACGGCACATATGCCACACATCAAACCTGTGCACAGTaGGACTGTGCCCAGAACGCC +
Preference number: 4 (lower is better)
Translates to: RHDLKTVKLLTYGTYATHQTCAQ*DCAQNA
Trigger: GGCGTTCTGGGCACAGTCCCACTGTGCACAGGTTTG...ATGTGTGGCATATGTGCCGTATGTCAGTAGCTTGACAGTTTTCAAATCGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp TCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACGCAGCATTAACTGGCTTAGGAGCAACGTaGCTCAACGTATGTGACTTC +
Preference number: 4 (lower is better)
Translates to: SSSNTSSPNRVQQHAALTGLGAT*LNVCDF
Trigger: GAAGTCACATACGTTGAGCCACGTTGCTCCTAAGCC...AGTTAATGCTGCGTGCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp AAAGGTAACCTAGAGTTGACTGTCACTACTGAGAATTTCCCTCCCTATGACAGTGCCAAAAACATGGCATaGAGGGAGGTCAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: KGNLELTVTTENFPPYDSAKNMA*REVRAP
Trigger: GGGGGCCCTGACCTCCCTCCATGCCATGTTTTTGGC...ACTGTCATAGGGAGGGAAATTCTCAGTAGTGACAGTCAACTCTAGGTTACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CAA 72 bp GCAGGCAGCCAGTTCGGAGAAACAGCCAGGACTTTTTaGTATGACATGGAAAAACCGGCAAGTCAACGTGTG +
Preference number: 4 (lower is better)
Translates to: AGSQFGETARTF*YDMEKPASQRV
Trigger: CACACGTTGACTTGCCGGTTTTTCCATGTCATACAAAAAAGTCCTGGCTGTTTCTCCGAACTGGCTGCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp TCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGTCCGATCCATTTGTCCTaGCTCCAGGCTAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SLHYICVCVSVYVCAGRGPIHLS*LQARSP
Trigger: TGGGGACCTAGCCTGGAGTCAGGACAAATGGATCGG...ACCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR TCA 90 bp AAAGGTAACCTAGAGTTGACTGTCACTACTGAGAATTTCCCTCCCTATGACAGTCAGTTTCAAGGCCCCTaGCCCAGCTTGACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: KGNLELTVTTENFPPYDSQFQGP*PSLTEP
Trigger: TGGCTCTGTCAAGCTGGGTCAGGGGCCTTGAAACTG...ACTGTCATAGGGAGGGAAATTCTCAGTAGTGACAGTCAACTCTAGGTTACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp CATAGTTCAGTTTGGTTCTTTCTCCTTCTTCAGGCCAGACAGCCGGGGGCAGGGCTGCAAACTGGGCAATaGTATCTTTCGATAGCAATT +
Preference number: 4 (lower is better)
Translates to: HSSVWFFLLLQARQPGAGLQTGQ*YLSIAI
Trigger: AATTGCTATCGAAAGATATCATTGCCCAGTTTGCAG...CCCTGCCCCCGGCTGTCTGGCCTGAAGAAGGAGAAAGAACCAAACTGAACTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp CAGAAACTCAATTCGCGTAGGGCCAGCATGATCTCAGAGCTGCTCTTGGTGTTCAAACTGTCAAGCTACTaGCATACGGCACATATGCCA +
Preference number: 4 (lower is better)
Translates to: QKLNSRRASMISELLLVFKLSSY*HTAHMP
Trigger: TGGCATATGTGCCGTATGTCAGTAGCTTGACAGTTT...GAACACCAAGAGCAGCTCTGAGATCATGCTGGCCCTACGCGAATTGAGTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp TCCATTTGTCCTGACTCCAGGCTAGGTCCCCAAGGGGAGGTCAGGCTCAGACTTAGCACTAAGCCTGGATaGAATTGTGTTAAGATATCT +
Preference number: 4 (lower is better)
Translates to: SICPDSRLGPQGEVRLRLSTKPG*NCVKIS
Trigger: AGATATCTTAACACAATTTCATCCAGGCTTAGTGCT...AAGTCTGAGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACAAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp CCACCAATCCAATTTACCATCCTGTGCATGCTACCTCTACAAGGCAATCTTCCCCTGATGCTGCCACAGTaGAATTCCTTTGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PPIQFTILCMLPLQGNLPLMLPQ*NSFGLL
Trigger: CAGAAGCCCAAAGGAATTGCACTGTGGCAGCATCAG...GGGAAGATTGCCTTGTAGAGGTAGCATGCACAGGATGGTAAATTGGATTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395802.7
CDS-3UTR GCA 90 bp TCCCAAGGAGCTGATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTGGGCAGACTGATTTTTAGCTaGAACCAAAATGTCCACATC +
Preference number: 4 (lower is better)
Translates to: SQGADGLDRTEDTESSLGRLIFS*NQNVHI
Trigger: GATGTGGACATTTTGGTTGCAGCTAAAAATCAGTCT...GCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATCAGCTCCTTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp ATCCTCCCTAGGCTCGCTCTTTCCATGCCAGTTTCGTCCCGATTATCTGACTCTATGTATTACTGCTGGTaGCAGCAGTTCAGAAGACGA +
Preference number: 4 (lower is better)
Translates to: ILPRLALSMPVSSRLSDSMYYCW*QQFRRR
Trigger: TCGTCTTCTGAACTGCTGGCACCAGCAGTAATACAT...AGAGTCAGATAATCGGGACGAAACTGGCATGGAAAGAGCGAGCCTAGGGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp CACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACGCAGTCCATCTATATACTTTaGAGGGGCCTTTCTAAATAC +
Preference number: 4 (lower is better)
Translates to: HSPPAAIPVHPTEFSSTQSIYIL*RGLSKY
Trigger: GTATTTAGAAAGGCCCCTGCAAAGTATATAGATGGA...CTGCGTGCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp CCAGAGACAGAGGAGCCCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGAAACATCATGTCAGCTaGCAAGCCATGAATTTATTA +
Preference number: 4 (lower is better)
Translates to: PETEEPTALQQQYQFTQQKHHVS*QAMNLL
Trigger: TAATAAATTCATGGCTTGGCAGCTGACATGATGTTT...CTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGGGCTCCTCTGTCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp CTCTCCAGAGACAGAGGAGCCCACAGCCCTCCAGCAGCAATACCAGTTCACCCATTTATCATTCTCTGCTaGCAATTCAAACACACATCT +
Preference number: 4 (lower is better)
Translates to: LSRDRGAHSPPAAIPVHPFIILC*QFKHTS
Trigger: AGATGTGTGTTTGAATTGCCAGCAGAGAATGATAAA...TGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGGGCTCCTCTGTCTCTGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp TCCATTTGTCCTGACTCCAGGCTAGGTCCCCAAGGGGAGGTCAGGCTCAGACTTTTAAATCCCATGATATaGTGGATCCACCAATCCAAT +
Preference number: 4 (lower is better)
Translates to: SICPDSRLGPQGEVRLRLLNPMI*WIHQSN
Trigger: ATTGGATTGGTGGATCCACCATATCATGGGATTTAA...AAGTCTGAGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACAAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR CCA 90 bp AACAAAGCACTGCCATTTATTTCCAAAGCGCTGGGTCAATCAGTCAACACACGCGAATTCCTATTGGGGTaGCCTCCCTGTCTGCACACT +
Preference number: 4 (lower is better)
Translates to: NKALPFISKALGQSVNTREFLLG*PPCLHT
Trigger: AGTGTGCAGACAGGGAGGCCACCCCAATAGGAATTC...GCGTGTGTTGACTGATTGACCCAGCGCTTTGGAAATAAATGGCAGTGCTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp AGGCACGATTTGAAAACTGTCAAGCTACTGACATACGGCACATATGCCACACATACCCCTAGGCACTGTTaGGGACCACCTAAGCACTCT +
Preference number: 4 (lower is better)
Translates to: RHDLKTVKLLTYGTYATHTPRHC*GPPKHS
Trigger: AGAGTGCTTAGGTGGTCCCCAACAGTGCCTAGGGGT...ATGTGTGGCATATGTGCCGTATGTCAGTAGCTTGACAGTTTTCAAATCGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
3UTR CAA 72 bp ACGCTCCTTATCAGGGGCTTCTATTACTTGCCCTCTTaGCTGATATCCTGGAGAACCGCAGTGCTAATTCAG +
Preference number: 4 (lower is better)
Translates to: TLLIRGFYYLPS*LISWRTAVLIQ
Trigger: CTGAATTAGCACTGCGGTTCTCCAGGATATCAGCAAAGAGGGCAAGTAATAGAAGCCCCTGATAAGGAGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp CCACCAATCCAATTTACCATCCTGTGCATGCTACCTCTACAAGGCAATCTTCCCATTCCTTTGGGCTTCTaGCTCTGTTCATCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PPIQFTILCMLPLQGNLPIPLGF*LCSSVP
Trigger: TGGGACTGATGAACAGAGTCAGAAGCCCAAAGGAAT...GGGAAGATTGCCTTGTAGAGGTAGCATGCACAGGATGGTAAATTGGATTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395802.7
CDS-3UTR TCA 90 bp ATCCTGTGCATGCTACCTCTACAAGGCAATCTTCCCAATAATTACACCAACGATAACCCCACCTCCACATaGCCAGACTCTCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: ILCMLPLQGNLPNNYTNDNPTST*PDSPET
Trigger: TGTCTCTGGAGAGTCTGGTCATGTGGAGGTGGGGTT...ATCGTTGGTGTAATTATTGGGAAGATTGCCTTGTAGAGGTAGCATGCACAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395802.7
CDS-3UTR TCA 90 bp AATTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCAAGGGACCTCGGAATTTaGGCTCGTGCTGCGGCTCGA +
Preference number: 4 (lower is better)
Translates to: NLNPMIWWIHQSNLPSCARDLGI*ARAAAR
Trigger: TCGAGCCGCAGCACGAGCTCAAATTCCGAGGTCCCT...TGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS-3UTR TCA 90 bp GGGAGGGGTAATTTAAAGGCAAGACCTGTGAGATGTCATCATACATTAATTTCTAGGGACCTCGGAATTTaGGCTCGTGCTGCGGCTCGA +
Preference number: 4 (lower is better)
Translates to: GRGNLKARPVRCHHTLISRDLGI*ARAAAR
Trigger: TCGAGCCGCAGCACGAGCTCAAATTCCGAGGTCCCT...AGAAATTAATGTATGATGACATCTCACAGGTCTTGCCTTTAAATTACCCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS-3UTR TCA 90 bp TTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGTAATAGGGACCTCGGAATTTaGGCTCGTGCTGCGGCTCGA +
Preference number: 4 (lower is better)
Translates to: LHYICVCVSVYVCAGRGNRDLGI*ARAAAR
Trigger: TCGAGCCGCAGCACGAGCTCAAATTCCGAGGTCCCT...ATTACCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS-3UTR TCA 90 bp CATAGTTCAGTTTGGTTCTTTCTCCTTCTTCAGGCCAGACAGCCGGGGGCAGGGTTTCTCAAACTACAATaGGAAATGGGCCATTCCTTT +
Preference number: 4 (lower is better)
Translates to: HSSVWFFLLLQARQPGAGFLKLQ*EMGHSF
Trigger: AAAGGAATGGCCCATTTCTCATTGTAGTTTGAGAAA...CCCTGCCCCCGGCTGTCTGGCCTGAAGAAGGAGAAAGAACCAAACTGAACTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp AGATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGAATTTGAGCTCGTGCTaGGGCTCGAGGCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: RSLHYICVCVSVYVCAGRNLSSC*GSRLRT
Trigger: GGTCCTGAGCCTCGAGCCGCAGCACGAGCTCAAATT...CCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS-3UTR GCA 90 bp TTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGTAATCGGAATTTGAGCTCGTaGTGCGGCTCGAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LHYICVCVSVYVCAGRGNRNLSS*CGSRLR
Trigger: CCTGAGCCTCGAGCCGCAGCACGAGCTCAAATTCCG...ATTACCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS-3UTR GCA 90 bp TCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACGCAGCATTAACTTTACCATCCTGTGCATaGTACCTCTACAAGGCAATC +
Preference number: 4 (lower is better)
Translates to: SSSNTSSPNRVQQHAALTLPSCA*YLYKAI
Trigger: GATTGCCTTGTAGAGGTAGCATGCACAGGATGGTAA...AGTTAATGCTGCGTGCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR GCA 90 bp TTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGTAATACAGCCTCCCAAGCTTaGCTGTCGGCTGACGCTCCT +
Preference number: 4 (lower is better)
Translates to: LHYICVCVSVYVCAGRGNTASQA*LSADAP
Trigger: AGGAGCGTCAGCCGACAGGCAAGCTTGGGAGGCTGT...ATTACCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp GATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCATGCTACCTCTACAAGGGCTAATGCTGAAATaGGGCTGTTGCTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: DMVDPPIQFTILCMLPLQGLMLK*GCCSAL
Trigger: CAGTGCAGAGCAACAGCCCCATTTCAGCATTAGCCC...TTGTAGAGGTAGCATGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000520497.1
CDS-3UTR CCA 90 bp AGGCACGATTTGAAAACTGTCAAGCTACTGACATACGGCACATATGCCACACATGGGCTAATGCTGAAATaGGGCTGTTGCTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: RHDLKTVKLLTYGTYATHGLMLK*GCCSAL
Trigger: CAGTGCAGAGCAACAGCCCCATTTCAGCATTAGCCC...ATGTGTGGCATATGTGCCGTATGTCAGTAGCTTGACAGTTTTCAAATCGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp ATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGTGGCTTGGACAGAACTaGAGACACGGAAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: IVTLYLCVCICVCVCREGWLGQN*RHGKQP
Trigger: AGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCA...CCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR TCA 90 bp GAACAAAGCACTGCCATTTATTTCCAAAGCGCTGGGTCAATCAGTCAACACACGTATGACGAGTACGTCTaGTGCTGCCACAGTGCAATT +
Preference number: 4 (lower is better)
Translates to: EQSTAIYFQSAGSISQHTYDEYV*CCHSAI
Trigger: AATTGCACTGTGGCAGCATCAGACGTACTCGTCATA...CGTGTGTTGACTGATTGACCCAGCGCTTTGGAAATAAATGGCAGTGCTTTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR TCA 90 bp CAGAAGGCACATGCCTTACAGCTCGGTCTTTTCACTCCCTTTTATAAGTACTGGAATGTCCACATCCTCTaGGAAGCTGAACACCTTCTC +
Preference number: 4 (lower is better)
Translates to: QKAHALQLGLFTPFYKYWNVHIL*EAEHLL
Trigger: GAGAAGGTGTTCAGCTTCTCAGAGGATGTGGACATT...CCAGTACTTATAAAAGGGAGTGAAAAGACCGAGCTGTAAGGCATGTGCCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp GATAAATTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGAGCTTGCCTGTCGGCTaGCGCTCCTTATCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: DKFKSHDMVDPPIQFTILSLPVG*RSLSGA
Trigger: AGCCCCTGATAAGGAGCGTCAGCCGACAGGCAAGCT...CAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp TCTGAAAGGCTCTGTAGCTCTGAGCTCTCACTACATTCAGTTCTATCTGACTCACGGCAAGTCAACGTGTaGAACGTGCACACTCATTTC +
Preference number: 4 (lower is better)
Translates to: SERLCSSELSLHSVLSDSRQVNV*NVHTHF
Trigger: GAAATGAGTGTGCACGTTTCACACGTTGACTTGCCG...TGAGTCAGATAGAACTGAATGTAGTGAGAGCTCAGAGCTACAGAGCCTTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp TCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGTGGTGGCCTCCCTGTCTaGACACTCAACACAATCCAT +
Preference number: 4 (lower is better)
Translates to: SLHYICVCVSVYVCAGRGGGLPV*TLNTIH
Trigger: ATGGATTGTGTTGAGTGTGCAGACAGGGAGGCCACC...ACCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp AACAAAGCACTGCCATTTATTTCCAAAGCGCTGGGTCAATCAGTCAACACACGCAAGGTCTTCCGGTTTTaGCTCCTTCCATACTGCTTC +
Preference number: 4 (lower is better)
Translates to: NKALPFISKALGQSVNTRKVFRF*LLPYCF
Trigger: GAAGCAGTATGGAAGGAGGCAAAACCGGAAGACCTT...GCGTGTGTTGACTGATTGACCCAGCGCTTTGGAAATAAATGGCAGTGCTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp GGCCAAAGCAATGGAAGGCCAAGGGTGACCAGGTGCTCAGCTTTTTCAGCAGTTTCTCTAGCCATAAACTaGCCACTGGTAAAAATCAAT +
Preference number: 4 (lower is better)
Translates to: GQSNGRPRVTRCSAFSAVSLAIN*PLVKIN
Trigger: ATTGATTTTTACCAGTGGCCAGTTTATGGCTAGAGA...AACTGCTGAAAAAGCTGAGCACCTGGTCACCCTTGGCCTTCCATTGCTTTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp AACAAAGCACTGCCATTTATTTCCAAAGCGCTGGGTCAATCAGTCAACACACGCCCCCCTTCTGTGTTATaGAGGTATAAGTCGTCTCTC +
Preference number: 4 (lower is better)
Translates to: NKALPFISKALGQSVNTRPPSVL*RYKSSL
Trigger: GAGAGACGACTTATACCTCCATAACACAGAAGGGGG...GCGTGTGTTGACTGATTGACCCAGCGCTTTGGAAATAAATGGCAGTGCTTTGTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp CATAGTTCAGTTTGGTTCTTTCTCCTTCTTCAGGCCAGACAGCCGGGGGCAGGGCATTGTATTTTGGCATaGATTCTGAGTTTGCAAACA +
Preference number: 4 (lower is better)
Translates to: HSSVWFFLLLQARQPGAGHCILA*ILSLQT
Trigger: TGTTTGCAAACTCAGAATCCATGCCAAAATACAATG...CCCTGCCCCCGGCTGTCTGGCCTGAAGAAGGAGAAAGAACCAAACTGAACTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp AAAATAAACATCAGCATTTATCTAGCAGCAGAAAGCGATTCTCCCACAGTACTGAGCAGGGGGAAGCAGTaGCCTCTACACCGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: KINISIYLAAESDSPTVLSRGKQ*PLHREG
Trigger: ACCTTCTCGGTGTAGAGGCCACTGCTTCCCCCTGCT...CAGTACTGTGGGAGAATCGCTTTCTGCTGCTAGATAAATGCTGATGTTTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp CAGAGTTCAGCAGCACGCAGCATTAACTGTACTCTTGTGACAATAAGAAAACATCACGCCTCTCACTTATaGCGAGTACGTCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: QSSAARSINCTLVTIRKHHASHL*RVRLML
Trigger: CAGCATCAGACGTACTCGTCATAAGTGAGAGGCGTG...ATGTTTTCTTATTGTCACAAGAGTACAGTTAATGCTGCGTGCTGCTGAACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR TCA 90 bp TTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGTAATTGGGCGCTGGAAGTGTaGGTAATGGTTGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LHYICVCVSVYVCAGRGNWALEV*VMVERW
Trigger: CCACCTCTCAACCATTACTCACACTTCCAGCGCCCA...ATTACCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR TCA 90 bp AGGCACGATTTGAAAACTGTCAAGCTACTGACATACGGCACATATGCCACACATCATCCTCTGAGAAGCTaGACACCTTCTCCTAGATGT +
Preference number: 4 (lower is better)
Translates to: RHDLKTVKLLTYGTYATHHPLRS*TPSPRC
Trigger: ACATCTAGGAGAAGGTGTTCAGCTTCTCAGAGGATG...ATGTGTGGCATATGTGCCGTATGTCAGTAGCTTGACAGTTTTCAAATCGTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp GTGTGTGCAGGGAGGGGTAATTTAAAGGCAAGACCTGTGAGATGTCATCATACATCCAGATACATTAATTaGGGCCCCTGCATCGATGAT +
Preference number: 4 (lower is better)
Translates to: VCAGRGNLKARPVRCHHTSRYIN*GPCIDD
Trigger: ATCATCGATGCAGGGGCCTCAATTAATGTATCTGGA...TGTATGATGACATCTCACAGGTCTTGCCTTTAAATTACCCCTCCCTGCACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395802.7
CDS-3UTR GCA 90 bp ATCCTGTGCATGCTACCTCTACAAGGCAATCTTCCCAATAATTACACCAACGATCTGAAATGGGGCTGTTaGTCTGCACTGTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: ILCMLPLQGNLPNNYTNDLKWGC*SALSSS
Trigger: TGAGGAAGACAGTGCAGAGCAACAGCCCCATTTCAG...ATCGTTGGTGTAATTATTGGGAAGATTGCCTTGTAGAGGTAGCATGCACAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000520497.1
CDS-3UTR GCA 90 bp CAGAGTTCAGCAGCACGCAGCATTAACTGTACTCTTGTGACAATAAGAAAACATTCGCTTCTAACCCTCTaGAGCCCGATCCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: QSSAARSINCTLVTIRKHSLLTL*SPIHLS
Trigger: GGACAAATGGATCGGGCTGCAGAGGGTTAGAAGCGA...ATGTTTTCTTATTGTCACAAGAGTACAGTTAATGCTGCGTGCTGCTGAACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR GCA 90 bp ATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGCCAAGGGTGACCAGGTaGTCAGCTTTTTCAGCAGTT +
Preference number: 4 (lower is better)
Translates to: IVTLYLCVCICVCVCREGPRVTR*SAFSAV
Trigger: AACTGCTGAAAAAGCTGAGCACCTGGTCACCCTTGG...CCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp TTCGGTGTCATCCAAAGAAGAACTCAGAGACTTAGACACTATTGGTGTTTCTGTGGGCTAATGCTGAAATaGGGCTGTTGCTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: FGVIQRRTQRLRHYWCFCGLMLK*GCCSAL
Trigger: CAGTGCAGAGCAACAGCCCCATTTCAGCATTAGCCC...ACAGAAACACCAATAGTGTCTAAGTCTCTGAGTTCTTCTTTGGATGACACCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520497.1
CDS-3UTR CCA 90 bp TCGCTCTTTCCATGCCAGTTTCGTCCCGATTATCTGACTCTTAACCCTCTTGGGCAACAACAGCAAACATaGCCCCAAGTGTTAATTAAG +
Preference number: 4 (lower is better)
Translates to: SLFPCQFRPDYLTLNPLGQQQQT*PQVLIK
Trigger: CTTAATTAACACTTGGGGCCATGTTTGCTGTTGTTG...CCCAAGAGGGTTAAGAGTCAGATAATCGGGACGAAACTGGCATGGAAAGAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp TCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACGCAGCATTAACTAGGGAGAGAACAGCATaGGTTACTGAAACCATTTAT +
Preference number: 4 (lower is better)
Translates to: SSSNTSSPNRVQQHAALTRERTA*VTETIY
Trigger: ATAAATGGTTTCAGTAACCCATGCTGTTCTCTCCCT...AGTTAATGCTGCGTGCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp GTGTGTGCAGGGAGGGGTAATTTAAAGGCAAGACCTGTGAGATGTCATCATACAAGAACATGCTGTAAATaGCTCTTTTGGTCTGGACCC +
Preference number: 4 (lower is better)
Translates to: VCAGRGNLKARPVRCHHTRTCCK*LFWSGP
Trigger: GGGTCCAGACCAAAAGAGCCATTTACAGCATGTTCT...TGTATGATGACATCTCACAGGTCTTGCCTTTAAATTACCCCTCCCTGCACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp AAGATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGCACGCCTCTCACTTATaGCGAGTACGTCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: KIVTLYLCVCICVCVCREHASHL*RVRLML
Trigger: CAGCATCAGACGTACTCGTCATAAGTGAGAGGCGTG...CTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR TCA 90 bp AACAAAGCACTGCCATTTATTTCCAAAGCGCTGGGTCAATCAGTCAACACACGCCTTGGTCCCTTTAAGTaGACAAAGCACTGCCATTTA +
Preference number: 4 (lower is better)
Translates to: NKALPFISKALGQSVNTRLGPFK*TKHCHL
Trigger: TAAATGGCAGTGCTTTGTTCACTTAAAGGGACCAAG...GCGTGTGTTGACTGATTGACCCAGCGCTTTGGAAATAAATGGCAGTGCTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR TCA 90 bp AGGCACGATTTGAAAACTGTCAAGCTACTGACATACGGCACATATGCCACACATACTAGAAGGATTCGCTaGAGAGTTTCTCTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: RHDLKTVKLLTYGTYATHTRRIR*RVSLFP
Trigger: AGGGAAGAGAGAAACTCTTCAGCGAATCCTTCTAGT...ATGTGTGGCATATGTGCCGTATGTCAGTAGCTTGACAGTTTTCAAATCGTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp GATAAATTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGAATGGCATGGTTCCCTaGCCTAGAAGGGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DKFKSHDMVDPPIQFTILNGMVP*PRREAA
Trigger: AGCAGCCTCCCTTCTAGGTCAGGGAACCATGCCATT...CAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp CTAAAAGATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGTCGAGGCTCAGGACCTaGTCCACCTTCGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: LKDRYIIFVCVYLCMCVQSRLRT*STFAMF
Trigger: GAACATGGCGAAGGTGGAGCAGGTCCTGAGCCTCGA...CTGCACACACATACACAGATACACACACACAAATATAATGTAACGATCTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS-3UTR GCA 90 bp AAGATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGTTCGGTCTGTCGGGTTaGCAAGCTTTAGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: KIVTLYLCVCICVCVCREFGLSG*QALGWW
Trigger: CCACCAACCTAAAGCTTGGCAACCCGACAGACCGAA...CTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS-3UTR GCA 90 bp TTCCATAACCTTCTTAACTTCGGTGTCATCCAAAGAAGAACTCAGAGACTTAGATTCGGTCTGTCGGGTTaGCAAGCTTTAGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: FHNLLNFGVIQRRTQRLRFGLSG*QALGWW
Trigger: CCACCAACCTAAAGCTTGGCAACCCGACAGACCGAA...TCTAAGTCTCTGAGTTCTTCTTTGGATGACACCGAAGTTAAGAAGGTTATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520497.1
CDS-3UTR GCA 90 bp AAGATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGTTTCTCTCTTCCCTTaGTCCCCACCCACAACTGCT +
Preference number: 4 (lower is better)
Translates to: KIVTLYLCVCICVCVCREVSLFP*SPPTTA
Trigger: AGCAGTTGTGGGTGGGGAGCAAGGGAAGAGAGAAAC...CTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR GCA 90 bp TCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGTCGCTTCCATCTCTTCTaGATTTGTGAGCACTATGGC +
Preference number: 4 (lower is better)
Translates to: SLHYICVCVSVYVCAGRGRFHLF*ICEHYG
Trigger: GCCATAGTGCTCACAAATGCAGAAGAGATGGAAGCG...ACCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp CAGAGTTCAGCAGCACGCAGCATTAACTGTACTCTTGTGACAATAAGAAAACATAAAGAAAGACGGGAATaGAGGCAGCCAGTTCGGAGA +
Preference number: 4 (lower is better)
Translates to: QSSAARSINCTLVTIRKHKERRE*RQPVRR
Trigger: TCTCCGAACTGGCTGCCTGCATTCCCGTCTTTCTTT...ATGTTTTCTTATTGTCACAAGAGTACAGTTAATGCTGCGTGCTGCTGAACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp ATCCTCCCTAGGCTCGCTCTTTCCATGCCAGTTTCGTCCCGATTATCTGACTCTATTTCTGTGAGTACCTaGGATTCAAAGTCAACTTTT +
Preference number: 4 (lower is better)
Translates to: ILPRLALSMPVSSRLSDSISVST*DSKSTF
Trigger: AAAAGTTGACTTTGAATCCCAGGTACTCACAGAAAT...AGAGTCAGATAATCGGGACGAAACTGGCATGGAAAGAGCGAGCCTAGGGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp GATAAATTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGGAGACGAATTCCTATTaGGGTGGCCTCCCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: DKFKSHDMVDPPIQFTILETNSY*GGLPVC
Trigger: GCAGACAGGGAGGCCACCCCAATAGGAATTCGTCTC...CAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp AACAAAGCACTGCCATTTATTTCCAAAGCGCTGGGTCAATCAGTCAACACACGCTCTTTGCTGATATCCTaGAGAACCGCAGTGCTAATT +
Preference number: 4 (lower is better)
Translates to: NKALPFISKALGQSVNTRSLLIS*RTAVLI
Trigger: AATTAGCACTGCGGTTCTCCAGGATATCAGCAAAGA...GCGTGTGTTGACTGATTGACCCAGCGCTTTGGAAATAAATGGCAGTGCTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp AGGCACGATTTGAAAACTGTCAAGCTACTGACATACGGCACATATGCCACACATCACACATCTAAGTTTTaGATCCATAAGGTCTTCCGG +
Preference number: 4 (lower is better)
Translates to: RHDLKTVKLLTYGTYATHHTSKF*IHKVFR
Trigger: CCGGAAGACCTTATGGATTCAAAACTTAGATGTGTG...ATGTGTGGCATATGTGCCGTATGTCAGTAGCTTGACAGTTTTCAAATCGTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp TTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGTAATGTGGCTCAACGTATGTaGCTTCTAAGGACTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LHYICVCVSVYVCAGRGNVAQRM*LLRTAF
Trigger: GAAGGCAGTCCTTAGAAGTCACATACGTTGAGCCAC...ATTACCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp AATTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCAACCTGTTTCTCTTCCTaGGCAGTTTCCTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: NLNPMIWWIHQSNLPSCATCFSS*AVSFCH
Trigger: GTGGCAGAAGGAAACTGCTCAGGAAGAGAAACAGGT...TGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp ATGATAAATTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCAGTGAAACGAAGCTCTaGCAGCAGCTCCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: MINLNPMIWWIHQSNLPSSETKL*QQLHLQ
Trigger: CTGCAGGTGGAGCTGCTGTCAGAGCTTCGTTTCACT...GGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATTTATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp TTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGTAATCACCCTAAATGTGCATaGATCTCCAAGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LHYICVCVSVYVCAGRGNHPKCA*ISKSSR
Trigger: CCTGGAGGACTTGGAGATGCATGCACATTTAGGGTG...ATTACCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp TTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGTAATGGCTCGCTCTTTCCATaGCAGTTTCGTCCCGATTAT +
Preference number: 4 (lower is better)
Translates to: LHYICVCVSVYVCAGRGNGSLFP*QFRPDY
Trigger: ATAATCGGGACGAAACTGGCATGGAAAGAGCGAGCC...ATTACCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp AAGATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGTGTTCCAGAAGAGTaGTCGTTGGCCTTATGGGAT +
Preference number: 4 (lower is better)
Translates to: KIVTLYLCVCICVCVCREGVPEE*SLALWD
Trigger: ATCCCATAAGGCCAACGACCACTCTTCTGGAACACC...CTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp TTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGTAATTCTCAGAGCTGCTCTTaGTGTTCCAGAAGAGTGGTC +
Preference number: 4 (lower is better)
Translates to: LHYICVCVSVYVCAGRGNSQSCS*CSRRVV
Trigger: GACCACTCTTCTGGAACACCAAGAGCAGCTCTGAGA...ATTACCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp CAGAAGGCACATGCCTTACAGCTCGGTCTTTTCACTCCCTTTTATAAGTACTGGAACAGCATGGGTTACTaGAACCATTTATTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: QKAHALQLGLFTPFYKYWNSMGY*NHLFRK
Trigger: CTTTCTGAATAAATGGTTTCAGTAACCCATGCTGTT...CCAGTACTTATAAAAGGGAGTGAAAAGACCGAGCTGTAAGGCATGTGCCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp TTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCATGTGCAGATACATTAATTaGGGCCCCTGCATCGATGAT +
Preference number: 4 (lower is better)
Translates to: FKSHDMVDPPIQFTILCMCRYIN*GPCIDD
Trigger: ATCATCGATGCAGGGGCCTCAATTAATGTATCTGCA...CATGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520497.1
CDS-3UTR GCA 90 bp ATCCTGTGCATGCTACCTCTACAAGGCAATCTTCCCAATAATTACACCAACGATACAGTACCTACGTGGTaGTGTAGTCTTCACCTTAAA +
Preference number: 4 (lower is better)
Translates to: ILCMLPLQGNLPNNYTNDTVPTW*CSLHLK
Trigger: TTTAAGGTGAAGACTACAGCACCACGTAGGTACTGT...ATCGTTGGTGTAATTATTGGGAAGATTGCCTTGTAGAGGTAGCATGCACAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000520497.1
CDS-3UTR GCA 90 bp GGGAGGGGTAATTTAAAGGCAAGACCTGTGAGATGTCATCATACATTAATTTCTTCTTCTTCCTTGAACTaGTTGTTCTCCTCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: GRGNLKARPVRCHHTLISSSSLN*LFSSRS
Trigger: GCTACGGGAGGAGAACAAGCAGTTCAAGGAAGAAGA...AGAAATTAATGTATGATGACATCTCACAGGTCTTGCCTTTAAATTACCCCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475243.6
ENST00000520497.1
CDS-3UTR GCA 90 bp GCATGCTACCTCTACAAGGCAATCTTCCCAATAATTACACCAACGATAAAGAACTTACCATCCTGTGCATaGTACCTCTACAAGGCAATC +
Preference number: 4 (lower is better)
Translates to: ACYLYKAIFPIITPTIKNLPSCA*YLYKAI
Trigger: GATTGCCTTGTAGAGGTAGCATGCACAGGATGGTAA...GTTCTTTATCGTTGGTGTAATTATTGGGAAGATTGCCTTGTAGAGGTAGCATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000520497.1
CDS-3UTR GCA 90 bp TCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGTGCCCCTATTGTTAAGTaGCGTAGATACAGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: SLHYICVCVSVYVCAGRGAPIVK*RRYSQK
Trigger: TTTTTGGCTGTATCTACGGCACTTAACAATAGGGGC...ACCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp CAGAGTTCAGCAGCACGCAGCATTAACTGTACTCTTGTGACAATAAGAAAACATAGTCAGACATGGCTTTaGGTATCAGTGAAACGAAGC +
Preference number: 4 (lower is better)
Translates to: QSSAARSINCTLVTIRKHSQTWL*VSVKRS
Trigger: GCTTCGTTTCACTGATACCCAAAGCCATGTCTGACT...ATGTTTTCTTATTGTCACAAGAGTACAGTTAATGCTGCGTGCTGCTGAACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp AATTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCAACTAGAAGGATTCGCTaGAGAGTTTCTCTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: NLNPMIWWIHQSNLPSCATRRIR*RVSLFP
Trigger: AGGGAAGAGAGAAACTCTTCAGCGAATCCTTCTAGT...TGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR TCA 90 bp AAAGGTAACCTAGAGTTGACTGTCACTACTGAGAATTTCCCTCCCTATGACAGTTTCCTGGGATTTGTTTaGAAGCGTTTAGGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: KGNLELTVTTENFPPYDSFLGFV*KRLGFH
Trigger: GTGAAAACCTAAACGCTTTCAAACAAATCCCAGGAA...ACTGTCATAGGGAGGGAAATTCTCAGTAGTGACAGTCAACTCTAGGTTACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp AGATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGATTCCAGCTCATCTTTaGGAACACTCCTTCTCAACA +
Preference number: 4 (lower is better)
Translates to: RSLHYICVCVSVYVCAGRIPAHL*EHSFST
Trigger: TGTTGAGAAGGAGTGTTCTCAAAGATGAGCTGGAAT...CCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp TTCGGTGTCATCCAAAGAAGAACTCAGAGACTTAGACACTATTGGTGTTTCTGTACAGTACCTACGTGGTaGTGTAGTCTTCACCTTAAA +
Preference number: 4 (lower is better)
Translates to: FGVIQRRTQRLRHYWCFCTVPTW*CSLHLK
Trigger: TTTAAGGTGAAGACTACAGCACCACGTAGGTACTGT...ACAGAAACACCAATAGTGTCTAAGTCTCTGAGTTCTTCTTTGGATGACACCGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520497.1
CDS-3UTR CCA 90 bp CTAAAAGATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGTACTGGGGGACACATaGGAAAAATCCTGGAGACGA +
Preference number: 4 (lower is better)
Translates to: LKDRYIIFVCVYLCMCVQVLGDT*EKSWRR
Trigger: TCGTCTCCAGGATTTTTCCCATGTGTCCCCCAGTAC...CTGCACACACATACACAGATACACACACACAAATATAATGTAACGATCTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp GGGAGGGGTAATTTAAAGGCAAGACCTGTGAGATGTCATCATACATTAATTTCTATGGCTCTTTTGGTCTaGACCCTGCAGAAATACATC +
Preference number: 4 (lower is better)
Translates to: GRGNLKARPVRCHHTLISMALLV*TLQKYI
Trigger: GATGTATTTCTGCAGGGTCCAGACCAAAAGAGCCAT...AGAAATTAATGTATGATGACATCTCACAGGTCTTGCCTTTAAATTACCCCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp AGATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGAATTTCCCTCCCTATaGCAGTTGTTATTTACTGAC +
Preference number: 4 (lower is better)
Translates to: RSLHYICVCVSVYVCAGREFPSL*QLLFTD
Trigger: GTCAGTAAATAACAACTGTCATAGGGAGGGAAATTC...CCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR TCA 90 bp TGTTATGGAGGTATAAGTCGTCTCTCTAGCCATAAACTGGCCACTGGTAAAAATGCAGATTTTCAGAGCTaGAATGGTATCTTAGCAATG +
Preference number: 4 (lower is better)
Translates to: CYGGISRLSSHKLATGKNADFQS*NGILAM
Trigger: CATTGCTAAGATACCATTTCAGCTCTGAAAATCTGC...ATTTTTACCAGTGGCCAGTTTATGGCTAGAGAGACGACTTATACCTCCATAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp ATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGCGACAGCAACAGAAATaGGAACCAAATATATTTTGC +
Preference number: 4 (lower is better)
Translates to: IVTLYLCVCICVCVCREGRQQQK*EPNIFC
Trigger: GCAAAATATATTTGGTTCTCATTTCTGTTGCTGTCG...CCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp AAGATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGTTTTGGTCTGGACCCTaGAGAAATACATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KIVTLYLCVCICVCVCREFWSGP*RNTSPS
Trigger: AGAAGGAGATGTATTTCTGCAGGGTCCAGACCAAAA...CTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp AATTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCAGTTTTCACGGATCACTaGAGGTTCTTCATTTTTCCC +
Preference number: 4 (lower is better)
Translates to: NLNPMIWWIHQSNLPSCAVFTDH*RFFIFP
Trigger: GGGAAAAATGAAGAACCTCCAGTGATCCGTGAAAAC...TGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp CAGAGTTCAGCAGCACGCAGCATTAACTGTACTCTTGTGACAATAAGAAAACATAAGCAATCCATATCGTaGCAACATTCCAAGGTATCA +
Preference number: 4 (lower is better)
Translates to: QSSAARSINCTLVTIRKHKQSIS*QHSKVS
Trigger: TGATACCTTGGAATGTTGCCACGATATGGATTGCTT...ATGTTTTCTTATTGTCACAAGAGTACAGTTAATGCTGCGTGCTGCTGAACTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp ATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGTATTTCAGTCAGACATaGCTTTGGGTATCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: IVTLYLCVCICVCVCREGYFSQT*LWVSVK
Trigger: TTTCACTGATACCCAAAGCCATGTCTGACTGAAATA...CCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR TCA 90 bp GGGAGGGGTAATTTAAAGGCAAGACCTGTGAGATGTCATCATACATTAATTTCTAGAGACTTCAGAGACTaGTTTTTAGCTGCAACCAAA +
Preference number: 4 (lower is better)
Translates to: GRGNLKARPVRCHHTLISRDFRD*FLAATK
Trigger: TTTGGTTGCAGCTAAAAATCAGTCTCTGAAGTCTCT...AGAAATTAATGTATGATGACATCTCACAGGTCTTGCCTTTAAATTACCCCTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR GCA 90 bp ATGATAAATTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTTACCATCCTGTGCATaGTACCTCTACAAGGCAATC +
Preference number: 4 (lower is better)
Translates to: MINLNPMIWWIHQSNLPSLPSCA*YLYKAI
Trigger: GATTGCCTTGTAGAGGTAGCATGCACAGGATGGTAA...GGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATTTATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS-3UTR CCA 90 bp AGATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGAATCCCATGATATGGTaGATCCACCAATCCAATTTA +
Preference number: 4 (lower is better)
Translates to: RSLHYICVCVSVYVCAGRNPMIW*IHQSNL
Trigger: TAAATTGGATTGGTGGATCCACCATATCATGGGATT...CCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS-3UTR CCA 90 bp GCATGCTACCTCTACAAGGCAATCTTCCCAATAATTACACCAACGATAAAGAACAATCCCATGATATGGTaGATCCACCAATCCAATTTA +
Preference number: 4 (lower is better)
Translates to: ACYLYKAIFPIITPTIKNNPMIW*IHQSNL
Trigger: TAAATTGGATTGGTGGATCCACCATATCATGGGATT...GTTCTTTATCGTTGGTGTAATTATTGGGAAGATTGCCTTGTAGAGGTAGCATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000520497.1
CDS-3UTR CCA 90 bp TGTTATGGAGGTATAAGTCGTCTCTCTAGCCATAAACTGGCCACTGGTAAAAATTTAAATCCCATGATATaGTGGATCCACCAATCCAAT +
Preference number: 4 (lower is better)
Translates to: CYGGISRLSSHKLATGKNLNPMI*WIHQSN
Trigger: ATTGGATTGGTGGATCCACCATATCATGGGATTTAA...ATTTTTACCAGTGGCCAGTTTATGGCTAGAGAGACGACTTATACCTCCATAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp TTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCATGTTAAATCCCATGATATaGTGGATCCACCAATCCAAT +
Preference number: 4 (lower is better)
Translates to: FKSHDMVDPPIQFTILCMLNPMI*WIHQSN
Trigger: ATTGGATTGGTGGATCCACCATATCATGGGATTTAA...CATGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS-3UTR CCA 90 bp ATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGGTAATGGTTGAGAGGTaGTATAAGAACAATCTAGAA +
Preference number: 4 (lower is better)
Translates to: IVTLYLCVCICVCVCREGVMVER*YKNNLE
Trigger: TTCTAGATTGTTCTTATACCACCTCTCAACCATTAC...CCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR CCA 90 bp TTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCATGATAGTCAAACAGAACTaGGTTGGTCTTTTATGGCAT +
Preference number: 4 (lower is better)
Translates to: FKSHDMVDPPIQFTILCMIVKQN*VGLLWH
Trigger: ATGCCATAAAAGACCAACCCAGTTCTGTTTGACTAT...CATGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR TCA 90 bp GATAAATTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGGAATTTCCCTCCCTATaGCAGTTGTTATTTACTGAC +
Preference number: 4 (lower is better)
Translates to: DKFKSHDMVDPPIQFTILEFPSL*QLLFTD
Trigger: GTCAGTAAATAACAACTGTCATAGGGAGGGAAATTC...CAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATTTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR CCA 90 bp AAAATAAACATCAGCATTTATCTAGCAGCAGAAAGCGATTCTCCCACAGTACTGTTTTCAGAGCTGAAATaGTATCTTAGCAATGTAGGC +
Preference number: 4 (lower is better)
Translates to: KINISIYLAAESDSPTVLFSELK*YLSNVG
Trigger: GCCTACATTGCTAAGATACCATTTCAGCTCTGAAAA...CAGTACTGTGGGAGAATCGCTTTCTGCTGCTAGATAAATGCTGATGTTTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp AAGATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGATAGGAAGTTCCAAATaGCAGCAGTTGATAAATCGT +
Preference number: 4 (lower is better)
Translates to: KIVTLYLCVCICVCVCREIGSSK*QQLINR
Trigger: ACGATTTATCAACTGCTGCCATTTGGAACTTCCTAT...CTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp GGGAGGGGTAATTTAAAGGCAAGACCTGTGAGATGTCATCATACATTAATTTCTTATTTCTACATCATGTaGTTTATCATTCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GRGNLKARPVRCHHTLISYFYIM*FIILCW
Trigger: CCAGCAGAGAATGATAAACCACATGATGTAGAAATA...AGAAATTAATGTATGATGACATCTCACAGGTCTTGCCTTTAAATTACCCCTCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CCA 90 bp CTAAAAGATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGTACAATATGCCATTGTaGCATTACTCATGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LKDRYIIFVCVYLCMCVQYNMPL*HYSWFP
Trigger: GGGAAACCATGAGTAATGCCACAATGGCATATTGTA...CTGCACACACATACACAGATACACACACACAAATATAATGTAACGATCTTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS-3UTR CCA 90 bp AATTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCAGTAATGGTTGAGAGGTaGTATAAGAACAATCTAGAA +
Preference number: 4 (lower is better)
Translates to: NLNPMIWWIHQSNLPSCAVMVER*YKNNLE
Trigger: TTCTAGATTGTTCTTATACCACCTCTCAACCATTAC...TGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR CCA 90 bp ATAAACATCAGCATTTATCTAGCAGCAGAAAGCGATTCTCCCACAGTACTGTTTGTTTACTTTTCTCATTaGGATCATAATCGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: INISIYLAAESDSPTVLFVYFSH*DHNRKA
Trigger: AGCCTTTCGATTATGATCCCAATGAGAAAAGTAAAC...AAACAGTACTGTGGGAGAATCGCTTTCTGCTGCTAGATAAATGCTGATGTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CAA 90 bp GGGCCACGTGGGGACTACTGTGTGGAGCTGACCGCACTCCCCAGCATGCTGGGCAGGTCAGGCTCAGACTaGGACCTGGGCGCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: GPRGDYCVELTALPSMLGRSGSD*DLGAGS
Trigger: ACTTCCAGCGCCCAGGTCCAAGTCTGAGCCTGACCT...GCCCAGCATGCTGGGGAGTGCGGTCAGCTCCACACAGTAGTCCCCACGTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS GCA 90 bp GGACCTCGGAATTTGAGCTCGTGCTGCGGCTCGAGGCTCAGGACCTaGTCCACCTTCGCCATGTTCCTTAGCGGCGGAGCACCTTTGGCG +
Preference number: 5 (lower is better)
Translates to: GPRNLSSCCGSRLRT*STFAMFLSGGAPLA
Trigger: CGCCAAAGGTGCTCCGCCGCTAAGGAACATGGCGAAGGTGGAGCAGGTCCTGAGCCTCGAGCCGCAGCACGAGCTCAAATTCCGAGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS-3UTR CAA 90 bp CTTGCTCCCCACCCACAACTGCTGGTGCCCTCGCTTCTAACCCTCTGCAGCCCGAAGGGACCTCGGAATTaGAGCTCGTGCTGCGGCTCG +
Preference number: 5 (lower is better)
Translates to: LAPHPQLLVPSLLTLCSPKGPRN*SSCCGS
Trigger: CGAGCCGCAGCACGAGCTCAAATTCCGAGGTCCCTT...CGGGCTGCAGAGGGTTAGAAGCGAGGGCACCAGCAGTTGTGGGTGGGGAGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR CAA 90 bp AGCCGGGTGCTAAGGCCTTCTTCCTTCCCAGTTGGGGCTAATGCTGAAATGGGGAGCGGCGGAGCACCTTaGGCGGGGAGACCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: SRVLRPSSFPVGANAEMGSGGAP*AGRPLR
Trigger: TCTCAGGGGTCTCCCCGCCAAAGGTGCTCCGCCGCT...CCCCATTTCAGCATTAGCCCCAACTGGGAAGGAAGAAGGCCTTAGCACCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000520497.1
CDS-3UTR CAA 90 bp GGGCCACGTGGGGACTACTGTGTGGAGCTGACCGCACTCCCCAGCATGCTGGGCTTTCGGTCTGTCGGGTaGCCAAGCTTTAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: GPRGDYCVELTALPSMLGFRSVG*PSFRLV
Trigger: CACCAACCTAAAGCTTGGCAACCCGACAGACCGAAA...GCCCAGCATGCTGGGGAGTGCGGTCAGCTCCACACAGTAGTCCCCACGTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS GCA 90 bp TCATCTCGGAATTTGAGCTCGTGCTGCGGCTCGAGGCTCAGGACCTaGTCCACCTTCGCCATGTTCCTTAGCGGCGGAGCACCTTTGGCG +
Preference number: 5 (lower is better)
Translates to: SSRNLSSCCGSRLRT*STFAMFLSGGAPLA
Trigger: CGCCAAAGGTGCTCCGCCGCTAAGGAACATGGCGAAGGTGGAGCAGGTCCTGAGCCTCGAGCCGCAGCACGAGCTCAAATTCCGAGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265619.6
CDS CCA 90 bp GTGTTGCTCCAGACAGCTCTGCGGAGAAAAAGGATCCCAGCACCGTaGCAGCCTCCTTGCACCGCAACCAGGAGACAGCATGAGGGACGC +
Preference number: 5 (lower is better)
Translates to: VLLQTALRRKRIPAP*QPPCTATRRQHEGR
Trigger: GCGTCCCTCATGCTGTCTCCTGGTTGCGGTGCAAGGAGGCTGCCACGGTGCTGGGATCCTTTTTCTCCGCAGAGCTGTCTGGAGCAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265619.6
CDS GCA 90 bp TATCTGGGAGAAACCAGGGTCATGGCTTCCCATCGCCGCAGGTGTTaGTCCAGACAGCTCTGCGGAGAAAAAGGATCCCAGCACCGTGGC +
Preference number: 5 (lower is better)
Translates to: YLGETRVMASHRRRC*SRQLCGEKGSQHRG
Trigger: GCCACGGTGCTGGGATCCTTTTTCTCCGCAGAGCTGTCTGGAGCAACACCTGCGGCGATGGGAAGCCATGACCCTGGTTTCTCCCAGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265619.6
CDS-3UTR CAA 90 bp TCCCAAGGAGCTGATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTGGGCAGGTCAGGCTCAGACTaGGACCTGGGCGCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: SQGADGLDRTEDTESSLGRSGSD*DLGAGS
Trigger: ACTTCCAGCGCCCAGGTCCAAGTCTGAGCCTGACCT...GCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATCAGCTCCTTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR CAA 90 bp AGCCGGGTGCTAAGGCCTTCTTCCTTCCCAGTTGGGGCTAATGCTGAAATGGGGAAGGGACCTCGGAATTaGAGCTCGTGCTGCGGCTCG +
Preference number: 5 (lower is better)
Translates to: SRVLRPSSFPVGANAEMGKGPRN*SSCCGS
Trigger: CGAGCCGCAGCACGAGCTCAAATTCCGAGGTCCCTT...CCCCATTTCAGCATTAGCCCCAACTGGGAAGGAAGAAGGCCTTAGCACCCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520497.1
CDS-3UTR CAA 90 bp CACCTCCACATGACCAGACTCTCCAGAGACAGAGGAGCCCACAGCCCTCCAGCATCTTCCTTGAACTGCTaGTTCTCCTCCCGTAGCCTC +
Preference number: 5 (lower is better)
Translates to: HLHMTRLSRDRGAHSPPASSLNC*FSSRSL
Trigger: GAGGCTACGGGAGGAGAACAAGCAGTTCAAGGAAGA...TGCTGGAGGGCTGTGGGCTCCTCTGTCTCTGGAGAGTCTGGTCATGTGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CAA 90 bp TCCCAAGGAGCTGATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTGGGCGGAGACGAATTCCTATaGGGGTGGCCTCCCTGTCTG +
Preference number: 5 (lower is better)
Translates to: SQGADGLDRTEDTESSLGGDEFL*GWPPCL
Trigger: CAGACAGGGAGGCCACCCCAATAGGAATTCGTCTCC...GCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATCAGCTCCTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CAA 90 bp GATGGCTTGGACAGAACTGAAGACACGGAAAGCAGCCTGGGCCGGGAGTGGGCCAGTCCATCTTCTTCCTaGAACTGCTTGTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: DGLDRTEDTESSLGREWASPSSS*NCLFSS
Trigger: GGAGGAGAACAAGCAGTTCAAGGAAGAAGATGGACT...GGCCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CAA 90 bp TGTCCTGACTCCAGGCTAGGTCCCCAAGGGGAGGTCAGGCTCAGACTTGGACCTCAGTCAGACATGGCTTaGGGTATCAGTGAAACGAAG +
Preference number: 5 (lower is better)
Translates to: CPDSRLGPQGEVRLRLGPQSDMA*GISETK
Trigger: CTTCGTTTCACTGATACCCAAAGCCATGTCTGACTG...AGGTCCAAGTCTGAGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CAA 90 bp AGGCACGATTTGAAAACTGTCAAGCTACTGACATACGGCACATATGCCACACATAGCGGCGGAGCACCTTaGGCGGGGAGACCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: RHDLKTVKLLTYGTYATHSGGAP*AGRPLR
Trigger: TCTCAGGGGTCTCCCCGCCAAAGGTGCTCCGCCGCT...ATGTGTGGCATATGTGCCGTATGTCAGTAGCTTGACAGTTTTCAAATCGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CAA 90 bp TGTCCTGACTCCAGGCTAGGTCCCCAAGGGGAGGTCAGGCTCAGACTTGGACCTTATTACTTGCCCTCTTaGCTGATATCCTGGAGAACC +
Preference number: 5 (lower is better)
Translates to: CPDSRLGPQGEVRLRLGPYYLPS*LISWRT
Trigger: GGTTCTCCAGGATATCAGCAAAGAGGGCAAGTAATA...AGGTCCAAGTCTGAGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CAA 90 bp CCAGAGACAGAGGAGCCCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGAGGGGCTTCTATTACTaGCCCTCTTTGCTGATATCC +
Preference number: 5 (lower is better)
Translates to: PETEEPTALQQQYQFTQQRGFYY*PSLLIS
Trigger: GGATATCAGCAAAGAGGGCAAGTAATAGAAGCCCCT...CTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGGGCTCCTCTGTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS GCA 90 bp GGCCTTCTTCCTTCCCAGTTGGGGCTAATGCTGAAATGGGGCTGTTaGTCTGCACTGTCTTCCTCATCCGCAGTCCATCTTCTTCCAGAT +
Preference number: 5 (lower is better)
Translates to: GLLPSQLGLMLKWGC*SALSSSSAVHLLPD
Trigger: ATCTGGAAGAAGATGGACTGCGGATGAGGAAGACAGTGCAGAGCAACAGCCCCATTTCAGCATTAGCCCCAACTGGGAAGGAAGAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395802.7
CDS CCA 90 bp CCTTCCTTCTCCCCACAGGCAACACCGGAATGGGATCACTCTCAATaGGGGTTGATATTGCCCTCCAGGACACATGTGGCAATATCTGGA +
Preference number: 5 (lower is better)
Translates to: PSFSPQATPEWDHSQ*GLILPSRTHVAISG
Trigger: TCCAGATATTGCCACATGTGTCCTGGAGGGCAATATCAACCCCCATTGAGAGTGATCCCATTCCGGTGTTGCCTGTGGGGAGAAGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS-3UTR CAA 90 bp ATCCTGTGCATGCTACCTCTACAAGGCAATCTTCCCAATAATTACACCAACGATAGCGGCGGAGCACCTTaGGCGGGGAGACCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: ILCMLPLQGNLPNNYTNDSGGAP*AGRPLR
Trigger: TCTCAGGGGTCTCCCCGCCAAAGGTGCTCCGCCGCT...ATCGTTGGTGTAATTATTGGGAAGATTGCCTTGTAGAGGTAGCATGCACAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000520497.1
CDS TCA 90 bp GGAGGGAGGGCATGGAAGCACGCAGCTTGTCAGGGAAAGAGTAACTaGCGATCATTGGCCTGGAATCTAGCTCTACCCATCATTTTCCAG +
Preference number: 5 (lower is better)
Translates to: GGRAWKHAACQGKSN*RSLAWNLALPIIFQ
Trigger: CTGGAAAATGATGGGTAGAGCTAGATTCCAGGCCAATGATCGTCAGTTACTCTTTCCCTGACAAGCTGCGTGCTTCCATGCCCTCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS-3UTR CAA 90 bp CACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACGCAGACAAAAGTTTATGCCTaGGCAGGGCAGGTTTCATCA +
Preference number: 5 (lower is better)
Translates to: HSPPAAIPVHPTEFSSTQTKVYA*AGQVSS
Trigger: TGATGAAACCTGCCCTGCCAAGGCATAAACTTTTGT...CTGCGTGCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS TCA 90 bp TCTCCCCACAGGCAACACCGGAATGGGATCACTCTCAATGGGGGTTaGTATTGCCCTCCAGGACACATGTGGCAATATCTGGAGACATTT +
Preference number: 5 (lower is better)
Translates to: SPHRQHRNGITLNGG*YCPPGHMWQYLETF
Trigger: AAATGTCTCCAGATATTGCCACATGTGTCCTGGAGGGCAATATCAACCCCCATTGAGAGTGATCCCATTCCGGTGTTGCCTGTGGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS-3UTR CAA 90 bp GTGTGTGCAGGGAGGGGTAATTTAAAGGCAAGACCTGTGAGATGTCATCATACAGCTCCCATCATCTCCTaGCCGAGACGGACTGGCAAT +
Preference number: 5 (lower is better)
Translates to: VCAGRGNLKARPVRCHHTAPIIS*PRRTGN
Trigger: ATTGCCAGTCCGTCTCGGCAAGGAGATGATGGGAGC...TGTATGATGACATCTCACAGGTCTTGCCTTTAAATTACCCCTCCCTGCACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS GCA 90 bp TCTTCCTTCCCAGTTGGGGCTAATGCTGAAATGGGGCTGTTGCTCTaGACTGTCTTCCTCATCCGCAGTCCATCTTCTTCCAGATACATT +
Preference number: 5 (lower is better)
Translates to: SSFPVGANAEMGLLL*TVFLIRSPSSSRYI
Trigger: AATGTATCTGGAAGAAGATGGACTGCGGATGAGGAAGACAGTGCAGAGCAACAGCCCCATTTCAGCATTAGCCCCAACTGGGAAGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395802.7
CDS-3UTR CAA 90 bp CCACCAATCCAATTTACCATCCTGTGCATGCTACCTCTACAAGGCAATCTTCCCCAAGGAGCTGATGGCTaGGACAGAACTGAAGACACG +
Preference number: 5 (lower is better)
Translates to: PPIQFTILCMLPLQGNLPQGADG*DRTEDT
Trigger: CGTGTCTTCAGTTCTGTCCAAGCCATCAGCTCCTTG...GGGAAGATTGCCTTGTAGAGGTAGCATGCACAGGATGGTAAATTGGATTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395802.7
CDS-3UTR CAA 90 bp ATCCTGTGCATGCTACCTCTACAAGGCAATCTTCCCAATAATTACACCAACGATAAGGGACCTCGGAATTaGAGCTCGTGCTGCGGCTCG +
Preference number: 5 (lower is better)
Translates to: ILCMLPLQGNLPNNYTNDKGPRN*SSCCGS
Trigger: CGAGCCGCAGCACGAGCTCAAATTCCGAGGTCCCTT...ATCGTTGGTGTAATTATTGGGAAGATTGCCTTGTAGAGGTAGCATGCACAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000520497.1
CDS-3UTR CAA 90 bp CCACAGCCCTCCAGCAGCAATACCAGTTCACCCAACAGAGTTCAGCAGCACGCATCTTTAAGAGGTATTTaGTATCGTGCCAAGGAAGCT +
Preference number: 5 (lower is better)
Translates to: PQPSSSNTSSPNRVQQHASLRGI*YRAKEA
Trigger: AGCTTCCTTGGCACGATACAAAATACCTCTTAAAGA...TGCGTGCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS TCA 90 bp AGCAACCTATACCTTTGCCAGGCCACAGAAGCTCTTCAGGATTTATaGCATCTCAATGGCCATCGGGCTGCACTTTTCAAGGGGAAACAC +
Preference number: 5 (lower is better)
Translates to: SNLYLCQATEALQDL*HLNGHRAALFKGKH
Trigger: GTGTTTCCCCTTGAAAAGTGCAGCCCGATGGCCATTGAGATGTCATAAATCCTGAAGAGCTTCTGTGGCCTGGCAAAGGTATAGGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS-3UTR CAA 90 bp CTCTGCACTGTCTTCCTCATCCGCAGTCCATCTTCTTCCTTGAACTGCTTGTTCAGTCCATCTTCTTCCTaGAACTGCTTGTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LCTVFLIRSPSSSLNCLFSPSSS*NCLFSS
Trigger: GGAGGAGAACAAGCAGTTCAAGGAAGAAGATGGACT...GAACAAGCAGTTCAAGGAAGAAGATGGACTGCGGATGAGGAAGACAGTGCAGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520497.1
CDS GCA 90 bp ACTCTGGAGAGCTCTGGGTCCCATGGCCAGCGTATTAAACAAGAGTaGCAGGGCTCAAACCTGGCTTTGACTCTAGAGAAAAACAATTTA +
Preference number: 5 (lower is better)
Translates to: TLESSGSHGQRIKQE*QGSNLALTLEKNNL
Trigger: TAAATTGTTTTTCTCTAGAGTCAAAGCCAGGTTTGAGCCCTGGCACTCTTGTTTAATACGCTGGCCATGGGACCCAGAGCTCTCCAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463370.5
CDS-3UTR CAA 90 bp TCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGTGCTGAAATGGGGCTGTaGCTCTGCACTGTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SLHYICVCVSVYVCAGRGAEMGL*LCTVFL
Trigger: GAGGAAGACAGTGCAGAGCAACAGCCCCATTTCAGC...ACCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS GCA 90 bp CACAGAAGCTCTTCAGGATTTATGACATCTCAATGGCCATCGGGCTaGACTTTTCAAGGGGAAACACTGTCAATCAGTTGTCTTTCCGTG +
Preference number: 5 (lower is better)
Translates to: HRSSSGFMTSQWPSG*TFQGETLSISCLSV
Trigger: CACGGAAAGACAACTGATTGACAGTGTTTCCCCTTGAAAAGTGCAGCCCGATGGCCATTGAGATGTCATAAATCCTGAAGAGCTTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS-3UTR CAA 90 bp CAGAGTTCAGCAGCACGCAGCATTAACTGTACTCTTGTGACAATAAGAAAACATCAGGGGTGGGTGAGCTaGTGCAGCTCAGCTAATGTT +
Preference number: 5 (lower is better)
Translates to: QSSAARSINCTLVTIRKHQGWVS*CSSANV
Trigger: AACATTAGCTGAGCTGCACAAGCTCACCCACCCCTG...ATGTTTTCTTATTGTCACAAGAGTACAGTTAATGCTGCGTGCTGCTGAACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CAA 90 bp GCATGCTACCTCTACAAGGCAATCTTCCCAATAATTACACCAACGATAAAGAACTTTCGGTCTGTCGGGTaGCCAAGCTTTAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: ACYLYKAIFPIITPTIKNFRSVG*PSFRLV
Trigger: CACCAACCTAAAGCTTGGCAACCCGACAGACCGAAA...GTTCTTTATCGTTGGTGTAATTATTGGGAAGATTGCCTTGTAGAGGTAGCATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000520497.1
CDS-3UTR CAA 90 bp GATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCATGCTACCTCTACAACCTCTGAACTTCACCTaGCAGCCTCTTACATTCTTC +
Preference number: 5 (lower is better)
Translates to: DMVDPPIQFTILCMLPLQPLNFT*QPLTFF
Trigger: GAAGAATGTAAGAGGCTGCAAGGTGAAGTTCAGAGG...TTGTAGAGGTAGCATGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520497.1
CDS-3UTR CAA 90 bp GGGAGGGGTAATTTAAAGGCAAGACCTGTGAGATGTCATCATACATTAATTTCTGCTGAAATGGGGCTGTaGCTCTGCACTGTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GRGNLKARPVRCHHTLISAEMGL*LCTVFL
Trigger: GAGGAAGACAGTGCAGAGCAACAGCCCCATTTCAGC...AGAAATTAATGTATGATGACATCTCACAGGTCTTGCCTTTAAATTACCCCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS-3UTR CAA 90 bp ATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGCTTCTTCCTTCCCAGTaGGGGCTAATGCTGAAATGG +
Preference number: 5 (lower is better)
Translates to: IVTLYLCVCICVCVCREGLLPSQ*GLMLKW
Trigger: CCATTTCAGCATTAGCCCCAACTGGGAAGGAAGAAG...CCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS CCA 90 bp GGGAAGTCCAAATTAGCATTTCAGATACAGTCTCCTTTCTTCAACTaGTCACAAGTGAGGATCATGAAAGGTAAAGCGCTCACAGTGGAC +
Preference number: 5 (lower is better)
Translates to: GKSKLAFQIQSPFFN*SQVRIMKGKALTVD
Trigger: GTCCACTGTGAGCGCTTTACCTTTCATGATCCTCACTTGTGACCAGTTGAAGAAAGGAGACTGTATCTGAAATGCTAATTTGGACTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS-3UTR CAA 90 bp GCATGCTACCTCTACAAGGCAATCTTCCCAATAATTACACCAACGATAAAGAACTTGCCAAGCTTTAGGTaGGTGGTGACAACATCGGTG +
Preference number: 5 (lower is better)
Translates to: ACYLYKAIFPIITPTIKNLPSFR*VVTTSV
Trigger: CACCGATGTTGTCACCACCAACCTAAAGCTTGGCAA...GTTCTTTATCGTTGGTGTAATTATTGGGAAGATTGCCTTGTAGAGGTAGCATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000520497.1
CDS-3UTR CAA 90 bp TGTTATGGAGGTATAAGTCGTCTCTCTAGCCATAAACTGGCCACTGGTAAAAATTTGCCAAGCTTTAGGTaGGTGGTGACAACATCGGTG +
Preference number: 5 (lower is better)
Translates to: CYGGISRLSSHKLATGKNLPSFR*VVTTSV
Trigger: CACCGATGTTGTCACCACCAACCTAAAGCTTGGCAA...ATTTTTACCAGTGGCCAGTTTATGGCTAGAGAGACGACTTATACCTCCATAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CAA 90 bp AACCTTCTTAACTTCGGTGTCATCCAAAGAAGAACTCAGAGACTTAGACACTATTTTCGGTCTGTCGGGTaGCCAAGCTTTAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: NLLNFGVIQRRTQRLRHYFRSVG*PSFRLV
Trigger: CACCAACCTAAAGCTTGGCAACCCGACAGACCGAAA...ATAGTGTCTAAGTCTCTGAGTTCTTCTTTGGATGACACCGAAGTTAAGAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520497.1
CDS-3UTR CAA 90 bp ATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGCCTCTGAACTTCACCTaGCAGCCTCTTACATTCTTC +
Preference number: 5 (lower is better)
Translates to: IVTLYLCVCICVCVCREGPLNFT*QPLTFF
Trigger: GAAGAATGTAAGAGGCTGCAAGGTGAAGTTCAGAGG...CCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475243.6
ENST00000520497.1
CDS-3UTR CAA 90 bp GGGAGGGGTAATTTAAAGGCAAGACCTGTGAGATGTCATCATACATTAATTTCTTCTTCCTTGAACTGCTaGTTCTCCTCCCGTAGCCTC +
Preference number: 5 (lower is better)
Translates to: GRGNLKARPVRCHHTLISSSLNC*FSSRSL
Trigger: GAGGCTACGGGAGGAGAACAAGCAGTTCAAGGAAGA...AGAAATTAATGTATGATGACATCTCACAGGTCTTGCCTTTAAATTACCCCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475243.6
ENST00000520497.1
CDS-3UTR CAA 90 bp AGGCACGATTTGAAAACTGTCAAGCTACTGACATACGGCACATATGCCACACATTTCCTTCTGATGAACTaGTCCTCTCAAACCTGTGCA +
Preference number: 5 (lower is better)
Translates to: RHDLKTVKLLTYGTYATHFLLMN*SSQTCA
Trigger: TGCACAGGTTTGAGAGGACAAGTTCATCAGAAGGAA...ATGTGTGGCATATGTGCCGTATGTCAGTAGCTTGACAGTTTTCAAATCGTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CAA 90 bp TCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGTCCAGAAGAGTGGTCGTaGGCCTTATGGGATTTGTAT +
Preference number: 5 (lower is better)
Translates to: SLHYICVCVSVYVCAGRGPEEWS*ALWDLY
Trigger: ATACAAATCCCATAAGGCCAACGACCACTCTTCTGG...ACCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CAA 90 bp CAGAGTTCAGCAGCACGCAGCATTAACTGTACTCTTGTGACAATAAGAAAACATATCTCAGAGCTGCTCTaGGTGTTCCAGAAGAGTGGT +
Preference number: 5 (lower is better)
Translates to: QSSAARSINCTLVTIRKHISELL*VFQKSG
Trigger: ACCACTCTTCTGGAACACCAAGAGCAGCTCTGAGAT...ATGTTTTCTTATTGTCACAAGAGTACAGTTAATGCTGCGTGCTGCTGAACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS CCA 90 bp TGGGATGAAGGTGAAACAAACTCAGTGTCTGCAATGTTTCAATCTTaGGAAGTTACATACTCCCCTTATTTCCCCTGCCAAGATTCAGCT +
Preference number: 5 (lower is better)
Translates to: WDEGETNSVSAMFQS*EVTYSPYFPCQDSA
Trigger: AGCTGAATCTTGGCAGGGGAAATAAGGGGAGTATGTAACTTCCCAAGATTGAAACATTGCAGACACTGAGTTTGTTTCACCTTCATCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS-3UTR CAA 90 bp AAAATAAACATCAGCATTTATCTAGCAGCAGAAAGCGATTCTCCCACAGTACTGCTTCTTCCTTCCCAGTaGGGGCTAATGCTGAAATGG +
Preference number: 5 (lower is better)
Translates to: KINISIYLAAESDSPTVLLLPSQ*GLMLKW
Trigger: CCATTTCAGCATTAGCCCCAACTGGGAAGGAAGAAG...CAGTACTGTGGGAGAATCGCTTTCTGCTGCTAGATAAATGCTGATGTTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CAA 90 bp ATAAACATCAGCATTTATCTAGCAGCAGAAAGCGATTCTCCCACAGTACTGTTTTTTCCTGGCACATTTTaGGCTGCCAGGATGACTGAG +
Preference number: 5 (lower is better)
Translates to: INISIYLAAESDSPTVLFFPGTF*AARMTE
Trigger: CTCAGTCATCCTGGCAGCCAAAAATGTGCCAGGAAA...AAACAGTACTGTGGGAGAATCGCTTTCTGCTGCTAGATAAATGCTGATGTTTAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CAA 90 bp ATGATAAATTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCCTTCTTCCTTCCCAGTaGGGGCTAATGCTGAAATGG +
Preference number: 5 (lower is better)
Translates to: MINLNPMIWWIHQSNLPSLLPSQ*GLMLKW
Trigger: CCATTTCAGCATTAGCCCCAACTGGGAAGGAAGAAG...GGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATTTATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS-3UTR CAA 90 bp TCTGAAAGGCTCTGTAGCTCTGAGCTCTCACTACATTCAGTTCTATCTGACTCAAAATATAGGCACGATTaGAAAACTGTCAAGCTACTG +
Preference number: 5 (lower is better)
Translates to: SERLCSSELSLHSVLSDSKYRHD*KTVKLL
Trigger: CAGTAGCTTGACAGTTTTCAAATCGTGCCTATATTT...TGAGTCAGATAGAACTGAATGTAGTGAGAGCTCAGAGCTACAGAGCCTTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CAA 90 bp AAGATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGCATTCCAGCTCATCTTaGAGAACACTCCTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: KIVTLYLCVCICVCVCREHSSSS*RTLLLN
Trigger: GTTGAGAAGGAGTGTTCTCAAAGATGAGCTGGAATG...CTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS CCA 90 bp ATTAGACAGAGGGCGAATTACTTTACCAACTTAGCATTTGGAAGCTaGGATGAAGGTGAAACAAACTCAGTGTCTGCAATGTTTCAATCT +
Preference number: 5 (lower is better)
Translates to: IRQRANYFTNLAFGS*DEGETNSVSAMFQS
Trigger: AGATTGAAACATTGCAGACACTGAGTTTGTTTCACCTTCATCCCAGCTTCCAAATGCTAAGTTGGTAAAGTAATTCGCCCTCTGTCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS-3UTR CAA 90 bp ATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGGGGGCATGGATTCTGAGTTaGCAAACACAAAAATTTGTG +
Preference number: 5 (lower is better)
Translates to: IVTLYLCVCICVCVCREGAWILS*QTQKFV
Trigger: CACAAATTTTTGTGTTTGCAAACTCAGAATCCATGC...CCCCTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CAA 90 bp TTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCATGTTTAGTTCTAAAAAGTaGCCCGATTTAACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: FKSHDMVDPPIQFTILCMFSSKK*PDLTSW
Trigger: CCAGGAGGTTAAATCGGGCAACTTTTTAGAACTAAA...CATGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS-3UTR CAA 90 bp AATTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCAAAAGGTAACCTAGAGTaGACTGTCACTACTGAGAAT +
Preference number: 5 (lower is better)
Translates to: NLNPMIWWIHQSNLPSCAKGNLE*TVTTEN
Trigger: ATTCTCAGTAGTGACAGTCAACTCTAGGTTACCTTT...TGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR CAA 90 bp AAGATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGGGAGAAAGGTAACCTAGAGTaGACTGTCACTACTGAGAAT +
Preference number: 5 (lower is better)
Translates to: KIVTLYLCVCICVCVCREKGNLE*TVTTEN
Trigger: ATTCTCAGTAGTGACAGTCAACTCTAGGTTACCTTT...CTCCCTGCACACACATACACAGATACACACACACAAATATAATGTAACGATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR CAA 90 bp TTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCATGTCAAACAGAACTGGGTaGGTCTTTTATGGCATAAAA +
Preference number: 5 (lower is better)
Translates to: FKSHDMVDPPIQFTILCMSNRTG*VFYGIK
Trigger: TTTTATGCCATAAAAGACCAACCCAGTTCTGTTTGA...CATGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS-3UTR CAA 90 bp AATTTAAATCCCATGATATGGTGGATCCACCAATCCAATTTACCATCCTGTGCAACAACAGTAACTTTCTaGAAAAGGTTCCTATCAGAG +
Preference number: 5 (lower is better)
Translates to: NLNPMIWWIHQSNLPSCATTVTF*KRFLSE
Trigger: CTCTGATAGGAACCTTTTCAAGAAAGTTACTGTTGT...TGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475243.6
CDS GCA 90 bp ATAATTGTGGAATACTTTCATCTGCCAACCAGAGCTTCATGGTTCTaGAAATACTTACAGACTTTTCCAATGAGATCATCAGGAAAAGAA +
Preference number: 5 (lower is better)
Translates to: IIVEYFHLPTRASWF*KYLQTFPMRSSGKE
Trigger: TTCTTTTCCTGATGATCTCATTGGAAAAGTCTGTAAGTATTTGCAGAACCATGAAGCTCTGGTTGGCAGATGAAAGTATTCCACAATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463370.5
CDS CCA 90 bp AAAATTATAATTGTGGAATACTTTCATCTGCCAACCAGAGCTTCATaGTTCTGCAAATACTTACAGACTTTTCCAATGAGATCATCAGGA +
Preference number: 5 (lower is better)
Translates to: KIIIVEYFHLPTRAS*FCKYLQTFPMRSSG
Trigger: TCCTGATGATCTCATTGGAAAAGTCTGTAAGTATTTGCAGAACCATGAAGCTCTGGTTGGCAGATGAAAGTATTCCACAATTATAATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463370.5
CDS-3UTR CAA 90 bp CTAAAAGATCGTTACATTATATTTGTGTGTGTGTATCTGTGTATGTGTGTGCAGTCAAACAGAACTGGGTaGGTCTTTTATGGCATAAAA +
Preference number: 5 (lower is better)
Translates to: LKDRYIIFVCVYLCMCVQSNRTG*VFYGIK
Trigger: TTTTATGCCATAAAAGACCAACCCAGTTCTGTTTGA...CTGCACACACATACACAGATACACACACACAAATATAATGTAACGATCTTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395802.7
ENST00000475243.6
CDS GCA 72 bp ACATCGGTGAAGGGACCTCGGAATTTGAGCTCGTGCTaGGGCTCGAGGCTCAGGACCTGCTCCACCTTCGCC +
Preference number: 6 (lower is better)
Translates to: TSVKGPRNLSSC*GSRLRTCSTFA
Trigger: GGCGAAGGTGGAGCAGGTCCTGAGCCTCGAGCCGCAGCACGAGCTCAAATTCCGAGGTCCCTTCACCGATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS GCA 72 bp AATTTGAGCTCGTGCTGCGGCTCGAGGCTCAGGACCTaGTCCACCTTCGCCATGTTCCTTAGCGGCGGAGCA +
Preference number: 6 (lower is better)
Translates to: NLSSCCGSRLRT*STFAMFLSGGA
Trigger: TGCTCCGCCGCTAAGGAACATGGCGAAGGTGGAGCAGGTCCTGAGCCTCGAGCCGCAGCACGAGCTCAAATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265619.6
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS GCA 72 bp ACAACATCGGTGAAGGGACCTCGGAATTTGAGCTCGTaGTGCGGCTCGAGGCTCAGGACCTGCTCCACCTTC +
Preference number: 6 (lower is better)
Translates to: TTSVKGPRNLSS*CGSRLRTCSTF
Trigger: GAAGGTGGAGCAGGTCCTGAGCCTCGAGCCGCAGCACGAGCTCAAATTCCGAGGTCCCTTCACCGATGTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS GCA 72 bp GGTTCAACATGTTCATCTCGGAATTTGAGCTCGTGCTaGGGCTCGAGGCTCAGGACCTGCTCCACCTTCGCC +
Preference number: 6 (lower is better)
Translates to: GSTCSSRNLSSC*GSRLRTCSTFA
Trigger: GGCGAAGGTGGAGCAGGTCCTGAGCCTCGAGCCGCAGCACGAGCTCAAATTCCGAGATGAACATGTTGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265619.6
CDS GCA 72 bp GTTGGTTCAACATGTTCATCTCGGAATTTGAGCTCGTaGTGCGGCTCGAGGCTCAGGACCTGCTCCACCTTC +
Preference number: 6 (lower is better)
Translates to: VGSTCSSRNLSS*CGSRLRTCSTF
Trigger: GAAGGTGGAGCAGGTCCTGAGCCTCGAGCCGCAGCACGAGCTCAAATTCCGAGATGAACATGTTGAACCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265619.6
CDS CCA 72 bp GACAGAGGTAATAGTATCTGGGAGAAACCAGGGTCATaGCTTCCCATCGCCGCAGGTGTTGCTCCAGACAGC +
Preference number: 6 (lower is better)
Translates to: DRGNSIWEKPGS*LPIAAGVAPDS
Trigger: GCTGTCTGGAGCAACACCTGCGGCGATGGGAAGCCATGACCCTGGTTTCTCCCAGATACTATTACCTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265619.6
CDS CCA 72 bp TCCCCACAGGCAACACCGGAATGGGATCACTCTCAATaGGGGTTGATATTGCCCTCCAGGACACATGTGGCA +
Preference number: 6 (lower is better)
Translates to: SPQATPEWDHSQ*GLILPSRTHVA
Trigger: TGCCACATGTGTCCTGGAGGGCAATATCAACCCCCATTGAGAGTGATCCCATTCCGGTGTTGCCTGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS CAA 90 bp AGGCCTTCTTCCTTCCCAGTTGGGGCTAATGCTGAAATGGGGCTGTaGCTCTGCACTGTCTTCCTCATCCGCAGTCCATCTTCTTCCAGA +
Preference number: 6 (lower is better)
Translates to: RPSSFPVGANAEMGL*LCTVFLIRSPSSSR
Trigger: TCTGGAAGAAGATGGACTGCGGATGAGGAAGACAGTGCAGAGCAACAGCCCCATTTCAGCATTAGCCCCAACTGGGAAGGAAGAAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395802.7
CDS CAA 72 bp CACACATTTCGGTCTGTCGGGTTGCCAAGCTTTAGGTaGGTGGTGACAACATCGGTGAAGGGACCTCGGAAT +
Preference number: 6 (lower is better)
Translates to: HTFRSVGLPSFR*VVTTSVKGPRN
Trigger: ATTCCGAGGTCCCTTCACCGATGTTGTCACCACCAACCTAAAGCTTGGCAACCCGACAGACCGAAATGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS CAA 90 bp TTCTCCCCACAGGCAACACCGGAATGGGATCACTCTCAATGGGGGTaGATATTGCCCTCCAGGACACATGTGGCAATATCTGGAGACATT +
Preference number: 6 (lower is better)
Translates to: FSPQATPEWDHSQWG*ILPSRTHVAISGDI
Trigger: AATGTCTCCAGATATTGCCACATGTGTCCTGGAGGGCAATATCAACCCCCATTGAGAGTGATCCCATTCCGGTGTTGCCTGTGGGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS TCA 72 bp TCTTCCGGTTTTGCCTCCTTCCACAGATACATTAATTaGGGCCCCTGCATCGATGATTCCGCTGTTGGGCCT +
Preference number: 6 (lower is better)
Translates to: SSGFASFHRYIN*GPCIDDSAVGP
Trigger: AGGCCCAACAGCGGAATCATCGATGCAGGGGCCTCAATTAATGTATCTGTGGAAGGAGGCAAAACCGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265619.6
CDS TCA 72 bp CTCATCCGCAGTCCATCTTCTTCCAGATACATTAATTaGGGCCCCTGCATCGATGATTCCGCTGTTGGGCCT +
Preference number: 6 (lower is better)
Translates to: LIRSPSSSRYIN*GPCIDDSAVGP
Trigger: AGGCCCAACAGCGGAATCATCGATGCAGGGGCCTCAATTAATGTATCTGGAAGAAGATGGACTGCGGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395802.7
CDS TCA 72 bp AGGCAACACCGGAATGGGATCACTCTCAATGGGGGTTaGTATTGCCCTCCAGGACACATGTGGCAATATCTG +
Preference number: 6 (lower is better)
Translates to: RQHRNGITLNGG*YCPPGHMWQYL
Trigger: CAGATATTGCCACATGTGTCCTGGAGGGCAATATCAACCCCCATTGAGAGTGATCCCATTCCGGTGTTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS TCA 72 bp GCTGAGGCCAGAATACTGCTTTCACAGCTTCCAAACTaGCCTTCCTGTGACAGGATGTACACTGGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: AEARILLSQLPN*PSCDRMYTGKR
Trigger: CCTCTTCCCAGTGTACATCCTGTCACAGGAAGGTCAGTTTGGAAGCTGTGAAAGCAGTATTCTGGCCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS TCA 72 bp GCATGGAAGCACGCAGCTTGTCAGGGAAAGAGTAACTaGCGATCATTGGCCTGGAATCTAGCTCTACCCATC +
Preference number: 6 (lower is better)
Translates to: AWKHAACQGKSN*RSLAWNLALPI
Trigger: GATGGGTAGAGCTAGATTCCAGGCCAATGATCGTCAGTTACTCTTTCCCTGACAAGCTGCGTGCTTCCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS GCA 72 bp AGCTCTGGGTCCCATGGCCAGCGTATTAAACAAGAGTaGCAGGGCTCAAACCTGGCTTTGACTCTAGAGAAA +
Preference number: 6 (lower is better)
Translates to: SSGSHGQRIKQE*QGSNLALTLEK
Trigger: TTTCTCTAGAGTCAAAGCCAGGTTTGAGCCCTGGCACTCTTGTTTAATACGCTGGCCATGGGACCCAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463370.5
CDS CAA 72 bp CAGGCAACACCGGAATGGGATCACTCTCAATGGGGGTaGATATTGCCCTCCAGGACACATGTGGCAATATCT +
Preference number: 6 (lower is better)
Translates to: QATPEWDHSQWG*ILPSRTHVAIS
Trigger: AGATATTGCCACATGTGTCCTGGAGGGCAATATCAACCCCCATTGAGAGTGATCCCATTCCGGTGTTGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS CAA 90 bp ACCTTAAAACACACATTTCGGTCTGTCGGGTTGCCAAGCTTTAGGTaGGTGGTGACAACATCGGTGAAGGGACCTCGGAATTTGAGCTCG +
Preference number: 6 (lower is better)
Translates to: TLKHTFRSVGLPSFR*VVTTSVKGPRNLSS
Trigger: CGAGCTCAAATTCCGAGGTCCCTTCACCGATGTTGTCACCACCAACCTAAAGCTTGGCAACCCGACAGACCGAAATGTGTGTTTTAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS CCA 72 bp GGCCACAGAAGCTCTTCAGGATTTATGACATCTCAATaGCCATCGGGCTGCACTTTTCAAGGGGAAACACTG +
Preference number: 6 (lower is better)
Translates to: GHRSSSGFMTSQ*PSGCTFQGETL
Trigger: CAGTGTTTCCCCTTGAAAAGTGCAGCCCGATGGCCATTGAGATGTCATAAATCCTGAAGAGCTTCTGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS CAA 90 bp CCACAGGCAACACCGGAATGGGATCACTCTCAATGGGGGTTGATATaGCCCTCCAGGACACATGTGGCAATATCTGGAGACATTTTTAGT +
Preference number: 6 (lower is better)
Translates to: PQATPEWDHSQWGLI*PSRTHVAISGDIFS
Trigger: ACTAAAAATGTCTCCAGATATTGCCACATGTGTCCTGGAGGGCAATATCAACCCCCATTGAGAGTGATCCCATTCCGGTGTTGCCTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS TCA 72 bp TACCTTTGCCAGGCCACAGAAGCTCTTCAGGATTTATaGCATCTCAATGGCCATCGGGCTGCACTTTTCAAG +
Preference number: 6 (lower is better)
Translates to: YLCQATEALQDL*HLNGHRAALFK
Trigger: CTTGAAAAGTGCAGCCCGATGGCCATTGAGATGTCATAAATCCTGAAGAGCTTCTGTGGCCTGGCAAAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS GCA 72 bp CCAAGTCAACCTATCACAGAGCTGAGGCCAGAATACTaGTTTCACAGCTTCCAAACTGACCTTCCTGTGACA +
Preference number: 6 (lower is better)
Translates to: PSQPITELRPEY*FHSFQTDLPVT
Trigger: TGTCACAGGAAGGTCAGTTTGGAAGCTGTGAAAGCAGTATTCTGGCCTCAGCTCTGTGATAGGTTGACTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS CAA 72 bp GTCTTCACCTTAAAACACACATTTCGGTCTGTCGGGTaGCCAAGCTTTAGGTTGGTGGTGACAACATCGGTG +
Preference number: 6 (lower is better)
Translates to: VFTLKHTFRSVG*PSFRLVVTTSV
Trigger: CACCGATGTTGTCACCACCAACCTAAAGCTTGGCAACCCGACAGACCGAAATGTGTGTTTTAAGGTGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265619.6
ENST00000395802.7
ENST00000475243.6
ENST00000520497.1
CDS CCA 72 bp CCAATCCCATCAGAAGTCCTGAGGAGGTTCATTTGTTaGTTCAACATGTTCATCTCGGAATTTGAGCTCGTG +
Preference number: 6 (lower is better)
Translates to: PIPSEVLRRFIC*FNMFISEFELV
Trigger: CACGAGCTCAAATTCCGAGATGAACATGTTGAACCAACAAATGAACCTCCTCAGGACTTCTGATGGGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265619.6
CDS CCA 72 bp GGTGAAACAAACTCAGTGTCTGCAATGTTTCAATCTTaGGAAGTTACATACTCCCCTTATTTCCCCTGCCAA +
Preference number: 6 (lower is better)
Translates to: GETNSVSAMFQS*EVTYSPYFPCQ
Trigger: TTGGCAGGGGAAATAAGGGGAGTATGTAACTTCCCAAGATTGAAACATTGCAGACACTGAGTTTGTTTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS GCA 72 bp GAATACTTTCATCTGCCAACCAGAGCTTCATGGTTCTaGAAATACTTACAGACTTTTCCAATGAGATCATCA +
Preference number: 6 (lower is better)
Translates to: EYFHLPTRASWF*KYLQTFPMRSS
Trigger: TGATGATCTCATTGGAAAAGTCTGTAAGTATTTGCAGAACCATGAAGCTCTGGTTGGCAGATGAAAGTATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463370.5
CDS CCA 72 bp ATTGTGGAATACTTTCATCTGCCAACCAGAGCTTCATaGTTCTGCAAATACTTACAGACTTTTCCAATGAGA +
Preference number: 6 (lower is better)
Translates to: IVEYFHLPTRAS*FCKYLQTFPMR
Trigger: TCTCATTGGAAAAGTCTGTAAGTATTTGCAGAACCATGAAGCTCTGGTTGGCAGATGAAAGTATTCCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463370.5
CDS CAA 72 bp GTAAATGATTCAGCAGAAATAAAATCTCAGGTAGTTTaGACACAAATCAACAGCACTCGCGCAGACCAACAT +
Preference number: 6 (lower is better)
Translates to: VNDSAEIKSQVV*TQINSTRADQH
Trigger: ATGTTGGTCTGCGCGAGTGCTGTTGATTTGTGTCAAAACTACCTGAGATTTTATTTCTGCTGAATCATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476395.1
CDS CAA 90 bp ATGATAGTGGTAAATGATTCAGCAGAAATAAAATCTCAGGTAGTTTaGACACAAATCAACAGCACTCGCGCAGACCAACATAGATACTGT +
Preference number: 6 (lower is better)
Translates to: MIVVNDSAEIKSQVV*TQINSTRADQHRYC
Trigger: ACAGTATCTATGTTGGTCTGCGCGAGTGCTGTTGATTTGTGTCAAAACTACCTGAGATTTTATTTCTGCTGAATCATTTACCACTATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476395.1