Pregenerated sensors for VAMP8 (Homo sapiens)
Ensembl gene IDs: ENSG00000118640Ensembl transcript IDs: ENST00000263864.10, ENST00000409760.1, ENST00000432071.1
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCTTCCGGGGGACCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGGGCCTCATGGAGGGTTGTCCCTaGAGAGAAGGGCAGGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: PSGGPRYLLGHTTWQQGLMEGCP*REGQVG Trigger: TCCCACCTGCCCTTCTCTTCAGGGACAACCCTCCAT...GAGGCCCTGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTCCCCCGGAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| 3UTR-3UTR GCA 90 bp | GGCATACAACATGGCAGCAGGGCCTCGGGAAGAGGGGTAGGAGGACCGAGCAGCTTTCGAGCCACCTTCTaGGATGTCGTCTTGAAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: GIQHGSRASGRGVGGPSSFRATF*DVVLKC Trigger: GCACTTCAAGACGACATCGCAGAAGGTGGCTCGAAA...GCTGCTCGGTCCTCCTACCCCTCTTCCCGAGGCCCTGCTGCCATGTTGTATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| 3UTR-3UTR CCA 90 bp | CACCAACAGTTTCCCAGCCACATGCTGGGCCCTCTAGGTCTCTCCAGCCCACTCGACCAAGGTACCTTCTaGGGCATACAACATGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: HQQFPSHMLGPLGLSSPLDQGTF*GIQHGS Trigger: GCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTC...GAGTGGGCTGGAGAGACCTAGAGGGCCCAGCATGTGGCTGGGAAACTGTTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| 3UTR-3UTR CCA 90 bp | CCTTCCGGGGGACCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGGGCCTCGAAAGGAGACCCTCTTaGCACACATTTATGGAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: PSGGPRYLLGHTTWQQGLERRPS*HTFMEG Trigger: ACCCTCCATAAATGTGTGCCAAGAGGGTCTCCTTTC...GAGGCCCTGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTCCCCCGGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| 3UTR-3UTR CCA 90 bp | ACCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGGGCCTCGGGAAGAGGGGGAAAGGAGACCCTCTTaGCACACATTTATGGAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: TKVPSGAYNMAAGPREEGERRPS*HTFMEG Trigger: ACCCTCCATAAATGTGTGCCAAGAGGGTCTCCTTTC...CCCCTCTTCCCGAGGCCCTGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTCCGGGGGACCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGGGCCTGAAAGGAGACCCTCTTaGCACACATTTATGGAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: SFRGTKVPSGAYNMAAGPERRPS*HTFMEG Trigger: ACCCTCCATAAATGTGTGCCAAGAGGGTCTCCTTTC...AGGCCCTGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTCCCCCGGAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTCCAGCCCACTCTAAGGACCCAAGAAATGCAGCCACAGTCCATCTCTCTTATGGAGGGTTGTCCCTaGAGAGAAGGGCAGGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SLQPTLRTQEMQPQSISLMEGCP*REGQVG Trigger: TCCCACCTGCCCTTCTCTTCAGGGACAACCCTCCAT...AAGAGAGATGGACTGTGGCTGCATTTCTTGGGTCCTTAGAGTGGGCTGGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTCCAGCCCACTCTAAGGACCCAAGAAATGCAGCCACAGTCCATCTCTCTTGACCAAGGTACCTTCTaGGGCATACAACATGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SLQPTLRTQEMQPQSISLDQGTF*GIQHGS Trigger: GCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTC...AAGAGAGATGGACTGTGGCTGCATTTCTTGGGTCCTTAGAGTGGGCTGGAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGCATACAACATGGCAGCAGGGCCTCGGGAAGAGGGGTAGGAGGACCGAGCCACATTTATGGAGGGTaGTCCCTGAAGAGAAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: WGIQHGSRASGRGVGGPSHIYGG*SLKRRA Trigger: TGCCCTTCTCTTCAGGGACAACCCTCCATAAATGTG...GCTCGGTCCTCCTACCCCTCTTCCCGAGGCCCTGCTGCCATGTTGTATGCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCCGGGGGACCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGGGCCTCCACATTTATGGAGGGTaGTCCCTGAAGAGAAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PSGGPRYLLGHTTWQQGLHIYGG*SLKRRA Trigger: TGCCCTTCTCTTCAGGGACAACCCTCCATAAATGTG...GAGGCCCTGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTCCCCCGGAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCTCTCCAGCCCACTCTAAGGACCCAAGAAATGCAGCCACAGTCCATCTCTGGAAAGGAGACCCTCTaGGCACACATTTATGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RSLQPTLRTQEMQPQSISGKETL*AHIYGG Trigger: CCCTCCATAAATGTGTGCCAAGAGGGTCTCCTTTCC...AGAGATGGACTGTGGCTGCATTTCTTGGGTCCTTAGAGTGGGCTGGAGAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCAGCCCACTCTAAGGACCCAAGAAATGCAGCCACAGTCCATCTCTCTTTTGGAAAGGAGACCCTCTaGGCACACATTTATGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SPAHSKDPRNAATVHLSFGKETL*AHIYGG Trigger: CCCTCCATAAATGTGTGCCAAGAGGGTCTCCTTTCC...AAAAGAGAGATGGACTGTGGCTGCATTTCTTGGGTCCTTAGAGTGGGCTGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGCATTCTCTGTAGAGGAAGACAGGAAAGGAGACCCTCTTGGCACACATTTCACATTTATGGAGGGTaGTCCCTGAAGAGAAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SSILCRGRQERRPSWHTFHIYGG*SLKRRA Trigger: TGCCCTTCTCTTCAGGGACAACCCTCCATAAATGTG...AAATGTGTGCCAAGAGGGTCTCCTTTCCTGTCTTCCTCTACAGAGAATGCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR GCA 90 bp | GGGGGACCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGGGCCTCGGGAAGCCTTGTTCCGCCCCCTaGCGCCAAGCAAGGAATCCG | + |
|
Preference number: 4 (lower is better) Translates to: GGPRYLLGHTTWQQGLGKPCSAP*RQARNP Trigger: CGGATTCCTTGCTTGGCGGCAGGGGGCGGAACAAGG...CTTCCCGAGGCCCTGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000432071.1 |
||
| CDS-3UTR GCA 90 bp | GGCATACAACATGGCAGCAGGGCCTCGGGAAGAGGGGTAGGAGGACCGAGCAGCCCCTCCACCTCACTTTaGAGGTTCCGCACACGATCA | + |
|
Preference number: 4 (lower is better) Translates to: GIQHGSRASGRGVGGPSSPSTSL*RFRTRS Trigger: TGATCGTGTGCGGAACCTGCAAAGTGAGGTGGAGGG...GCTGCTCGGTCCTCCTACCCCTCTTCCCGAGGCCCTGCTGCCATGTTGTATGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR CCA 90 bp | CTTCTGGGGCATACAACATGGCAGCAGGGCCTCGGGAAGAGGGGTAGGAGGACCCCTCAGCCCCTGGTGTaGCTTCCAGATCCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLGHTTWQQGLGKRGRRTPQPLV*LPDPLS Trigger: AGACAGAGGATCTGGAAGCCACACCAGGGGCTGAGG...GGTCCTCCTACCCCTCTTCCCGAGGCCCTGCTGCCATGTTGTATGCCCCAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| CDS-3UTR TCA 90 bp | ACCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGGGCCTCGGGAAGAGGGGATGGAGGGTTGTCCCTaGAGAGAAGGGCAGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TKVPSGAYNMAAGPREEGMEGCP*REGQVG Trigger: TCCCACCTGCCCTTCTCTTCAGGGACAACCCTCCAT...CCCCTCTTCCCGAGGCCCTGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR CCA 90 bp | GGCATACAACATGGCAGCAGGGCCTCGGGAAGAGGGGTAGGAGGACCGAGCAGCGACCAAGGTACCTTCTaGGGCATACAACATGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GIQHGSRASGRGVGGPSSDQGTF*GIQHGS Trigger: GCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTC...GCTGCTCGGTCCTCCTACCCCTCTTCCCGAGGCCCTGCTGCCATGTTGTATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR TCA 90 bp | CCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGGGCCTCGGGAAGAGGGGTAGGCCGGTCAGTAAGTaGATTCGCCTAGTCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PRYLLGHTTWQQGLGKRGRPVSK*IRLVGF Trigger: GAAGCCGACTAGGCGAATTCACTTACTGACCGGCCT...ACCCCTCTTCCCGAGGCCCTGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263864.10 ENST00000409760.1 |
||
| CDS-3UTR TCA 90 bp | GGGCATACAACATGGCAGCAGGGCCTCGGGAAGAGGGGTAGGAGGACCGAGCAGGCTGAACACAGAACTTaGGGCTCCAGACTTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GHTTWQQGLGKRGRRTEQAEHRT*GSRLCS Trigger: TGAGCAAAGTCTGGAGCCTCAAGTTCTGTGTTCAGC...CTGCTCGGTCCTCCTACCCCTCTTCCCGAGGCCCTGCTGCCATGTTGTATGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| CDS-3UTR GCA 90 bp | GGGCATACAACATGGCAGCAGGGCCTCGGGAAGAGGGGTAGGAGGACCGAGCAGTTTCGAGCCACCTTCTaGGATGTCGTCTTGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GHTTWQQGLGKRGRRTEQFRATF*DVVLKC Trigger: GCACTTCAAGACGACATCGCAGAAGGTGGCTCGAAA...CTGCTCGGTCCTCCTACCCCTCTTCCCGAGGCCCTGCTGCCATGTTGTATGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR CCA 90 bp | AGGGCCTCGGGAAGAGGGGTAGGAGGACCGAGCAGCATTCTCTGTAGAGGAAGATTCCTCCACCTTCACTaGCTTCCTCCTTTGCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RASGRGVGGPSSILCRGRFLHLH*LPPLPR Trigger: GCGGGGCAAAGGAGGAAGCCAGTGAAGGTGGAGGAA...TCTTCCTCTACAGAGAATGCTGCTCGGTCCTCCTACCCCTCTTCCCGAGGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432071.1 |
||
| CDS-3UTR GCA 90 bp | CCTTCCGGGGGACCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGGGCCTCTTTCGAGCCACCTTCTaGGATGTCGTCTTGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSGGPRYLLGHTTWQQGLFRATF*DVVLKC Trigger: GCACTTCAAGACGACATCGCAGAAGGTGGCTCGAAA...GAGGCCCTGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTCCCCCGGAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR TCA 90 bp | TCTCCTTCCGGGGGACCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGGGCTCTGCGATGTCGTCTTaGAGTGCTCAGATGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPSGGPRYLLGHTTWQQGSAMSS*SAQMWL Trigger: AAGCCACATCTGAGCACTTCAAGACGACATCGCAGA...GCCCTGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTCCCCCGGAAGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000263864.10 ENST00000432071.1 |
||
| CDS-3UTR GCA 90 bp | GGCAGCAGGGCCTCGGGAAGAGGGGTAGGAGGACCGAGCAGCATTCTCTGTAGAGATGTCGTCTTGAAGTaGTCAGATGTGGCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSRASGRGVGGPSSILCRDVVLK*SDVASR Trigger: TCTGGAAGCCACATCTGAGCACTTCAAGACGACATC...TCTACAGAGAATGCTGCTCGGTCCTCCTACCCCTCTTCCCGAGGCCCTGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263864.10 ENST00000432071.1 |
||
| CDS-3UTR CCA 90 bp | ACCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGGGCCTCGGGAAGAGGGGTTCCTCCACCTTCACTaGCTTCCTCCATGTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TKVPSGAYNMAAGPREEGFLHLH*LPPCLR Trigger: TCTGAGACATGGAGGAAGCCAGTGAAGGTGGAGGAA...CCCCTCTTCCCGAGGCCCTGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263864.10 ENST00000409760.1 |
||
| CDS-3UTR GCA 90 bp | CTCTTGGCACACATTTATGGAGGGTTGTCCCTGAAGAGAAGGGCAGGTGGGAGAACTGGCTTCCTCCTTTaGCCCGCTCCAAGGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLAHIYGGLSLKRRAGGRTGFLL*PAPRLL Trigger: AAGGAGCCTTGGAGCGGGGCAAAGGAGGAAGCCAGT...TCTCCCACCTGCCCTTCTCTTCAGGGACAACCCTCCATAAATGTGTGCCAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432071.1 |
||
| CDS-3UTR TCA 90 bp | AGGGATACTGAAAGGTCTTTATTACCCACTGGCCACCAACAGTTTCCCAGCCACAGCCAGCCTCCCCGCTaGACACAGAACTTGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RDTERSLLPTGHQQFPSHSQPPR*TQNLRL Trigger: GAGCCTCAAGTTCTGTGTTCAGCGGGGAGGCTGGCT...GTGGCTGGGAAACTGTTGGTGGCCAGTGGGTAATAAAGACCTTTCAGTATCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| CDS-3UTR GCA 90 bp | CCGAGCAGCATTCTCTGTAGAGGAAGACAGGAAAGGAGACCCTCTTGGCACACACCCTCCACCTCACTTTaGAGGTTCCGCACACGATCA | + |
|
Preference number: 4 (lower is better) Translates to: PSSILCRGRQERRPSWHTPSTSL*RFRTRS Trigger: TGATCGTGTGCGGAACCTGCAAAGTGAGGTGGAGGG...TGTGTGCCAAGAGGGTCTCCTTTCCTGTCTTCCTCTACAGAGAATGCTGCTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR CCA 90 bp | CCTCTTGGCACACATTTATGGAGGGTTGTCCCTGAAGAGAAGGGCAGGTGGGAGGACCAAGGTACCTTCTaGGGCATACAACATGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLGTHLWRVVPEEKGRWEDQGTF*GIQHGS Trigger: GCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTC...CTCCCACCTGCCCTTCTCTTCAGGGACAACCCTCCATAAATGTGTGCCAAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR TCA 90 bp | CTCTTGGCACACATTTATGGAGGGTTGTCCCTGAAGAGAAGGGCAGGTGGGAGATCTGCGATGTCGTCTTaGAGTGCTCAGACCAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLAHIYGGLSLKRRAGGRSAMSS*SAQTKS Trigger: GCTCTTGGTCTGAGCACTTCAAGACGACATCGCAGA...TCTCCCACCTGCCCTTCTCTTCAGGGACAACCCTCCATAAATGTGTGCCAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| CDS-3UTR GCA 90 bp | CCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGGGCCTCGGGAAGAGGGGTGATCCTCTGTCTTGTTaGGGAGATGTTCCAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRYLLGHTTWQQGLGKRGDPLSC*GDVPSF Trigger: AAAACTTGGAACATCTCCGCAACAAGACAGAGGATC...ACCCCTCTTCCCGAGGCCCTGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR GCA 90 bp | TTTCTCTCCTTCCGGGGGACCAAGGTACCTTCTGGGGCATACAACATGGCAGCATTTCGAGCCACCTTCTaGGATGTCGTCTTGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLSFRGTKVPSGAYNMAAFRATF*DVVLKC Trigger: GCACTTCAAGACGACATCGCAGAAGGTGGCTCGAAA...TGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTCCCCCGGAAGGAGAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR CCA 90 bp | CCGGGGGACCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGGGCCTCGGGAATCCGCTCCACATTCTaGGTCATAATATTCTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: PGDQGTFWGIQHGSRASGIRSTF*VIIFLT Trigger: AGTTAAGAATATTATGACCCAGAATGTGGAGCGGAT...TCCCGAGGCCCTGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTCCCCCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR CCA 90 bp | AGAGGGGTAGGAGGACCGAGCAGCATTCTCTGTAGAGGAAGACAGGAAAGGAGAGACCAAGGTACCTTCTaGGGCATACAACATGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGVGGPSSILCRGRQERRDQGTF*GIQHGS Trigger: GCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTC...TCTCCTTTCCTGTCTTCCTCTACAGAGAATGCTGCTCGGTCCTCCTACCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR TCA 90 bp | GGGATACTGAAAGGTCTTTATTACCCACTGGCCACCAACAGTTTCCCAGCCACAAGGCCGGTCAGTAAGTaGATTCGCCTAGTCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GILKGLYYPLATNSFPATRPVSK*IRLVGF Trigger: GAAGCCGACTAGGCGAATTCACTTACTGACCGGCCT...TGTGGCTGGGAAACTGTTGGTGGCCAGTGGGTAATAAAGACCTTTCAGTATCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263864.10 ENST00000409760.1 |
||
| CDS-3UTR TCA 90 bp | CCGAGCAGCATTCTCTGTAGAGGAAGACAGGAAAGGAGACCCTCTTGGCACACATCTGCGATGTCGTCTTaGAGTGCTCAGATGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSSILCRGRQERRPSWHTSAMSS*SAQMWL Trigger: AAGCCACATCTGAGCACTTCAAGACGACATCGCAGA...TGTGTGCCAAGAGGGTCTCCTTTCCTGTCTTCCTCTACAGAGAATGCTGCTCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263864.10 ENST00000432071.1 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGCCCACTCTAAGGACCCAAGAAATGCAGCCACAGTCCATCTCTCTTTTCCCTCCACCTCACTTTaGAGGTTCCGCACACGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SPAHSKDPRNAATVHLSFPSTSL*RFRTRS Trigger: TGATCGTGTGCGGAACCTGCAAAGTGAGGTGGAGGG...AAAAGAGAGATGGACTGTGGCTGCATTTCTTGGGTCCTTAGAGTGGGCTGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTCCTTCCGGGGGACCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGAAAGGAGACCCTCTTaGCACACATTTATGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLSFRGTKVPSGAYNMAAERRPS*HTFMEG Trigger: ACCCTCCATAAATGTGTGCCAAGAGGGTCTCCTTTC...TGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTCCCCCGGAAGGAGAGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR CCA 90 bp | CACCAACAGTTTCCCAGCCACATGCTGGGCCCTCTAGGTCTCTCCAGCCCACTCATCCGCTCCACATTCTaGGTCATAATATTCTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: HQQFPSHMLGPLGLSSPLIRSTF*VIIFLT Trigger: AGTTAAGAATATTATGACCCAGAATGTGGAGCGGAT...GAGTGGGCTGGAGAGACCTAGAGGGCCCAGCATGTGGCTGGGAAACTGTTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR CCA 90 bp | AGAGGGGTAGGAGGACCGAGCAGCATTCTCTGTAGAGGAAGACAGGAAAGGAGAGAAAGGAGACCCTCTTaGCACACATTTATGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGVGGPSSILCRGRQERRERRPS*HTFMEG Trigger: ACCCTCCATAAATGTGTGCCAAGAGGGTCTCCTTTC...TCTCCTTTCCTGTCTTCCTCTACAGAGAATGCTGCTCGGTCCTCCTACCCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR CCA 90 bp | CCGAGCAGCATTCTCTGTAGAGGAAGACAGGAAAGGAGACCCTCTTGGCACACAGTCTTTATTACCCACTaGCCACCAACAGTTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSSILCRGRQERRPSWHTVFITH*PPTVSQ Trigger: CTGGGAAACTGTTGGTGGCCAGTGGGTAATAAAGAC...TGTGTGCCAAGAGGGTCTCCTTTCCTGTCTTCCTCTACAGAGAATGCTGCTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263864.10 ENST00000409760.1 |
||
| CDS-3UTR CCA 90 bp | GCAGCATTCTCTGTAGAGGAAGACAGGAAAGGAGACCCTCTTGGCACACATTTATTCCTCCACCTTCACTaGCTTCCTCCATGTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AAFSVEEDRKGDPLGTHLFLHLH*LPPCLR Trigger: TCTGAGACATGGAGGAAGCCAGTGAAGGTGGAGGAA...TAAATGTGTGCCAAGAGGGTCTCCTTTCCTGTCTTCCTCTACAGAGAATGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263864.10 ENST00000409760.1 |
||
| CDS-3UTR GCA 90 bp | GCATTCTCTGTAGAGGAAGACAGGAAAGGAGACCCTCTTGGCACACATTTATGGGATGTCGTCTTGAAGTaGTCAGATGTGGCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AFSVEEDRKGDPLGTHLWDVVLK*SDVASR Trigger: TCTGGAAGCCACATCTGAGCACTTCAAGACGACATC...CCATAAATGTGTGCCAAGAGGGTCTCCTTTCCTGTCTTCCTCTACAGAGAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263864.10 ENST00000432071.1 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTCCTTCCGGGGGACCAAGGTACCTTCTGGGGCATACAACATGGCAGCAATCCGCTCCACATTCTaGGTCATAATATTCTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: FLSFRGTKVPSGAYNMAAIRSTF*VIIFLT Trigger: AGTTAAGAATATTATGACCCAGAATGTGGAGCGGAT...TGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTCCCCCGGAAGGAGAGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR TCA 90 bp | AATGAAGAGGATGATGATAAAAACAATCACGCAGATAAGGACAATCATCTTCACGAGTTACTTCCTCCCTaGAACAGCTGGCCTCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NEEDDDKNNHADKDNHLHELLPP*NSWPQP Trigger: GGGCTGAGGCCAGCTGTTTCAGGGAGGAAGTAACTC...GTGAAGATGATTGTCCTTATCTGCGTGATTGTTTTTATCATCATCCTCTTCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| CDS-3UTR CCA 90 bp | GAAGAGGATGATGATAAAAACAATCACGCAGATAAGGACAATCATCTTCACGTTGTCTTTATTACCCACTaGCCACCAACAGTTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EEDDDKNNHADKDNHLHVVFITH*PPTVSQ Trigger: CTGGGAAACTGTTGGTGGCCAGTGGGTAATAAAGAC...AACGTGAAGATGATTGTCCTTATCTGCGTGATTGTTTTTATCATCATCCTCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| CDS-3UTR GCA 90 bp | ACAATGAAGAGGATGATGATAAAAACAATCACGCAGATAAGGACAATCATCTTCGATGTCGTCTTGAAGTaGTCAGACCAAGAGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TMKRMMIKTITQIRTIIFDVVLK*SDQEPR Trigger: TCTTGGCTCTTGGTCTGAGCACTTCAAGACGACATC...GAAGATGATTGTCCTTATCTGCGTGATTGTTTTTATCATCATCCTCTTCATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| CDS-3UTR CCA 90 bp | AAAAACAATCACGCAGATAAGGACAATCATCTTCACGTTCTTCCACCAGAATTTGACTTTGCTCAACTTTaGAGTTACTTCCTCCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KNNHADKDNHLHVLPPEFDFAQL*SYFLPE Trigger: TTCAGGGAGGAAGTAACTCCAAAGTTGAGCAAAGTC...AAATTCTGGTGGAAGAACGTGAAGATGATTGTCCTTATCTGCGTGATTGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| CDS-3UTR GCA 90 bp | ACAATGAAGAGGATGATGATAAAAACAATCACGCAGATAAGGACAATCATCTTCGATCCTCTGTCTTGTTaGGGAGATGTTCCAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TMKRMMIKTITQIRTIIFDPLSC*GDVPSF Trigger: AAAACTTGGAACATCTCCGCAACAAGACAGAGGATC...GAAGATGATTGTCCTTATCTGCGTGATTGTTTTTATCATCATCCTCTTCATTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| CDS GCA 90 bp | TGGCTTCCTCCTTTGCCCCGCTCCAAGGCTCCTTGTTCCGCCCCCTaGCGCCAAGCAAGGAATCCGGCGCCGCCGGTCGTGGGTAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: WLPPLPRSKAPCSAP*RQARNPAPPVVGSI Trigger: AATACTACCCACGACCGGCGGCGCCGGATTCCTTGCTTGGCGGCAGGGGGCGGAACAAGGAGCCTTGGAGCGGGGCAAAGGAGGAAGCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000432071.1 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTCCTTCCGGGGGACCAAGGTACCTTCTGGGGCATACAACATGGCAGCACCGCTCCAAGGCTCCTaGTTCCGCCCCCTGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLSFRGTKVPSGAYNMAAPLQGS*FRPLPP Trigger: TGGCGGCAGGGGGCGGAACAAGGAGCCTTGGAGCGG...TGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTCCCCCGGAAGGAGAGAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000432071.1 |
||
| CDS-3UTR CAA 90 bp | ACCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGGGCCTCGGGAAGAGGGGTCCCTCCACCTCACTTaGCAGGTTCCGCACACGATC | + |
|
Preference number: 5 (lower is better) Translates to: TKVPSGAYNMAAGPREEGSLHLT*QVPHTI Trigger: GATCGTGTGCGGAACCTGCAAAGTGAGGTGGAGGGA...CCCCTCTTCCCGAGGCCCTGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR CAA 90 bp | CCGGGGGACCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGGGCCTCGGGATCCAGATCCTCTGTCTaGTTGCGGAGATGTTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGDQGTFWGIQHGSRASGSRSSV*LRRCSK Trigger: CTTGGAACATCTCCGCAACAAGACAGAGGATCTGGA...TCCCGAGGCCCTGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTCCCCCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR CAA 90 bp | ACATGGCAGCAGGGCCTCGGGAAGAGGGGTAGGAGGACCGAGCAGCATTCTCTGTCCAGATCCTCTGTCTaGTTGCGGAGATGTTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TWQQGLGKRGRRTEQHSLSRSSV*LRRCSK Trigger: CTTGGAACATCTCCGCAACAAGACAGAGGATCTGGA...CAGAGAATGCTGCTCGGTCCTCCTACCCCTCTTCCCGAGGCCCTGCTGCCATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR CAA 90 bp | CTTCTGGGGCATACAACATGGCAGCAGGGCCTCGGGAAGAGGGGTAGGAGGACCCACATTTATGGAGGGTaGTCCCTGAAGAGAAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLGHTTWQQGLGKRGRRTHIYGG*SLKRRA Trigger: TGCCCTTCTCTTCAGGGACAACCCTCCATAAATGTG...GGTCCTCCTACCCCTCTTCCCGAGGCCCTGCTGCCATGTTGTATGCCCCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR CAA 90 bp | GGCATACAACATGGCAGCAGGGCCTCGGGAAGAGGGGTAGGAGGACCGAGCAGCAGATCCTCTGTCTTGTaGCGGAGATGTTCCAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GIQHGSRASGRGVGGPSSRSSVL*RRCSKF Trigger: AAACTTGGAACATCTCCGCAACAAGACAGAGGATCT...GCTGCTCGGTCCTCCTACCCCTCTTCCCGAGGCCCTGCTGCCATGTTGTATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR CAA 90 bp | TCTCCTTCCGGGGGACCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGGGCTTCTGCGATGTCGTCTaGAAGTGCTCAGATGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPSGGPRYLLGHTTWQQGFCDVV*KCSDVA Trigger: AGCCACATCTGAGCACTTCAAGACGACATCGCAGAA...GCCCTGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTCCCCCGGAAGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000263864.10 ENST00000432071.1 |
||
| CDS-3UTR CAA 90 bp | TCCTTCCGGGGGACCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGGGCCTTTCTGCGATGTCGTCTaGAAGTGCTCAGATGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SFRGTKVPSGAYNMAAGPFCDVV*KCSDVA Trigger: AGCCACATCTGAGCACTTCAAGACGACATCGCAGAA...AGGCCCTGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTCCCCCGGAAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000263864.10 ENST00000432071.1 |
||
| CDS-3UTR CAA 90 bp | TCCTTCCGGGGGACCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGGGCCTTTCTGCGATGTCGTCTaGAAGTGCTCAGACCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SFRGTKVPSGAYNMAAGPFCDVV*KCSDQE Trigger: CTCTTGGTCTGAGCACTTCAAGACGACATCGCAGAA...AGGCCCTGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTCCCCCGGAAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| CDS-3UTR CAA 90 bp | AGGGCCTCGGGAAGAGGGGTAGGAGGACCGAGCAGCATTCTCTGTAGAGGAAGATCCAGATCCTCTGTCTaGTTGCGGAGATGTTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RASGRGVGGPSSILCRGRSRSSV*LRRCSK Trigger: CTTGGAACATCTCCGCAACAAGACAGAGGATCTGGA...TCTTCCTCTACAGAGAATGCTGCTCGGTCCTCCTACCCCTCTTCCCGAGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS CCA 90 bp | TCCCCGCTGAACACAGAACTTGAGGCTCCAGACTTTGCTCAACTTTaGAGTTACTTCCTCCCTGAAACAGCTGGCCTCAGCCCCTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SPLNTELEAPDFAQL*SYFLPETAGLSPWC Trigger: ACACCAGGGGCTGAGGCCAGCTGTTTCAGGGAGGAAGTAACTCCAAAGTTGAGCAAAGTCTGGAGCCTCAAGTTCTGTGTTCAGCGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCCTTCCGGGGGACCAAGGTACCTTCTGGGGCATACAACATGGCAGCAGCACATTTATGGAGGGTaGTCCCTGAAGAGAAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSPSGGPRYLLGHTTWQQHIYGG*SLKRRA Trigger: TGCCCTTCTCTTCAGGGACAACCCTCCATAAATGTG...CTGCTGCCATGTTGTATGCCCCAGAAGGTACCTTGGTCCCCCGGAAGGAGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR CAA 90 bp | GCATTCTCTGTAGAGGAAGACAGGAAAGGAGACCCTCTTGGCACACATTTATGGCACTGGCTTCCTCCTTaGCCCCGCTCCAAGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AFSVEEDRKGDPLGTHLWHWLPP*PRSKAP Trigger: AGGAGCCTTGGAGCGGGGCAAAGGAGGAAGCCAGTG...CCATAAATGTGTGCCAAGAGGGTCTCCTTTCCTGTCTTCCTCTACAGAGAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432071.1 |
||
| CDS-3UTR CAA 90 bp | AGGGATACTGAAAGGTCTTTATTACCCACTGGCCACCAACAGTTTCCCAGCCACTCCCTCCACCTCACTTaGCAGGTTCCGCACACGATC | + |
|
Preference number: 5 (lower is better) Translates to: RDTERSLLPTGHQQFPSHSLHLT*QVPHTI Trigger: GATCGTGTGCGGAACCTGCAAAGTGAGGTGGAGGGA...GTGGCTGGGAAACTGTTGGTGGCCAGTGGGTAATAAAGACCTTTCAGTATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263864.10 ENST00000409760.1 |
||
| CDS-3UTR CAA 90 bp | TCTCCAGCCCACTCTAAGGACCCAAGAAATGCAGCCACAGTCCATCTCTCTTTTTCCCTCCACCTCACTTaGCAGGTTCCGCACACGATC | + |
|
Preference number: 5 (lower is better) Translates to: SPAHSKDPRNAATVHLSFSLHLT*QVPHTI Trigger: GATCGTGTGCGGAACCTGCAAAGTGAGGTGGAGGGA...AAAAGAGAGATGGACTGTGGCTGCATTTCTTGGGTCCTTAGAGTGGGCTGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS TCA 90 bp | CAAGAGTTCACACAGGACTCAGAAAGCCAGAGCCAGCCTCCCCGCTaGACACAGAACTTGAGGCTCCAGACTTTGCTCAACTTTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QEFTQDSESQSQPPR*TQNLRLQTLLNFGV Trigger: AACTCCAAAGTTGAGCAAAGTCTGGAGCCTCAAGTTCTGTGTTCAGCGGGGAGGCTGGCTCTGGCTTTCTGAGTCCTGTGTGAACTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| CDS-3UTR CAA 90 bp | CCGAGCAGCATTCTCTGTAGAGGAAGACAGGAAAGGAGACCCTCTTGGCACACACACATTTATGGAGGGTaGTCCCTGAAGAGAAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSSILCRGRQERRPSWHTHIYGG*SLKRRA Trigger: TGCCCTTCTCTTCAGGGACAACCCTCCATAAATGTG...TGTGTGCCAAGAGGGTCTCCTTTCCTGTCTTCCTCTACAGAGAATGCTGCTCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR CAA 90 bp | GCATTCTCTGTAGAGGAAGACAGGAAAGGAGACCCTCTTGGCACACATTTATGGGGAAAGGAGACCCTCTaGGCACACATTTATGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AFSVEEDRKGDPLGTHLWGKETL*AHIYGG Trigger: CCCTCCATAAATGTGTGCCAAGAGGGTCTCCTTTCC...CCATAAATGTGTGCCAAGAGGGTCTCCTTTCCTGTCTTCCTCTACAGAGAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS GCA 90 bp | TCCACATTCTGGGTCATAATATTCTTAACTCCCTCCACCTCACTTTaGAGGTTCCGCACACGATCATTTCCTCCACCTTCACTGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: STFWVIIFLTPSTSL*RFRTRSFPPPSLAS Trigger: GGAAGCCAGTGAAGGTGGAGGAAATGATCGTGTGCGGAACCTGCAAAGTGAGGTGGAGGGAGTTAAGAATATTATGACCCAGAATGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS GCA 90 bp | ACAATCATCTTCACGTTCTTCCACCAGAATTTTCGAGCCACCTTCTaGGATGTCGTCTTGAAGTGCTCAGATGTGGCTTCCAGATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TIIFTFFHQNFRATF*DVVLKCSDVASRSS Trigger: AGAGGATCTGGAAGCCACATCTGAGCACTTCAAGACGACATCGCAGAAGGTGGCTCGAAAATTCTGGTGGAAGAACGTGAAGATGATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263864.10 ENST00000432071.1 |
||
| CDS GCA 90 bp | ACAATCATCTTCACGTTCTTCCACCAGAATTTTCGAGCCACCTTCTaGGATGTCGTCTTGAAGTGCTCAGACCAAGAGCCAAGAGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: TIIFTFFHQNFRATF*DVVLKCSDQEPRVH Trigger: GTGAACTCTTGGCTCTTGGTCTGAGCACTTCAAGACGACATCGCAGAAGGTGGCTCGAAAATTCTGGTGGAAGAACGTGAAGATGATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| CDS-3UTR CAA 90 bp | TCTCCAGCCCACTCTAAGGACCCAAGAAATGCAGCCACAGTCCATCTCTCTTTTTTGAGGCTCCAGACTTaGCTCAACTTTGGAGTTACT | + |
|
Preference number: 5 (lower is better) Translates to: SPAHSKDPRNAATVHLSFLRLQT*LNFGVT Trigger: AGTAACTCCAAAGTTGAGCAAAGTCTGGAGCCTCAA...AAAAGAGAGATGGACTGTGGCTGCATTTCTTGGGTCCTTAGAGTGGGCTGGAGA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| CDS-3UTR CAA 90 bp | AGCAGCATTCTCTGTAGAGGAAGACAGGAAAGGAGACCCTCTTGGCACACATTTAGATCCTCTGTCTTGTaGCGGAGATGTTCCAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSILCRGRQERRPSWHTFRSSVL*RRCSKF Trigger: AAACTTGGAACATCTCCGCAACAAGACAGAGGATCT...AAATGTGTGCCAAGAGGGTCTCCTTTCCTGTCTTCCTCTACAGAGAATGCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS-3UTR CAA 90 bp | ACAATGAAGAGGATGATGATAAAAACAATCACGCAGATAAGGACAATCATCTTCGGAAAGGAGACCCTCTaGGCACACATTTATGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TMKRMMIKTITQIRTIIFGKETL*AHIYGG Trigger: CCCTCCATAAATGTGTGCCAAGAGGGTCTCCTTTCC...GAAGATGATTGTCCTTATCTGCGTGATTGTTTTTATCATCATCCTCTTCATTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| CDS CAA 72 bp | TCACTGGCTTCCTCCTTTGCCCCGCTCCAAGGCTCCTaGTTCCGCCCCCTGCCGCCAAGCAAGGAATCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLASSFAPLQGS*FRPLPPSKESG Trigger: GCCGGATTCCTTGCTTGGCGGCAGGGGGCGGAACAAGGAGCCTTGGAGCGGGGCAAAGGAGGAAGCCAGTGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000432071.1 |
||
| CDS TCA 72 bp | ACACAGGACTCAGAAAGCCAGAGCCAGCCTCCCCGCTaGACACAGAACTTGAGGCTCCAGACTTTGCTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: TQDSESQSQPPR*TQNLRLQTLLN Trigger: GTTGAGCAAAGTCTGGAGCCTCAAGTTCTGTGTTCAGCGGGGAGGCTGGCTCTGGCTTTCTGAGTCCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| CDS TCA 72 bp | AAAGCCAGAGCCAGCCTCCCCGCTGAACACAGAACTTaGGGCTCCAGACTTTGCTCAACTTTGGAGTTACTT | + |
|
Preference number: 6 (lower is better) Translates to: KARASLPAEHRT*GSRLCSTLELL Trigger: AAGTAACTCCAAAGTTGAGCAAAGTCTGGAGCCTCAAGTTCTGTGTTCAGCGGGGAGGCTGGCTCTGGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| CDS CAA 72 bp | CACCAGAATTTTCGAGCCACCTTCTGCGATGTCGTCTaGAAGTGCTCAGATGTGGCTTCCAGATCCTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HQNFRATFCDVV*KCSDVASRSSV Trigger: GACAGAGGATCTGGAAGCCACATCTGAGCACTTCAAGACGACATCGCAGAAGGTGGCTCGAAAATTCTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263864.10 ENST00000432071.1 |
||
| CDS TCA 72 bp | ACCAGAATTTTCGAGCCACCTTCTGCGATGTCGTCTTaGAGTGCTCAGATGTGGCTTCCAGATCCTCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: TRIFEPPSAMSS*SAQMWLPDPLS Trigger: AGACAGAGGATCTGGAAGCCACATCTGAGCACTTCAAGACGACATCGCAGAAGGTGGCTCGAAAATTCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263864.10 ENST00000432071.1 |
||
| CDS GCA 72 bp | TTCACGTTCTTCCACCAGAATTTTCGAGCCACCTTCTaGGATGTCGTCTTGAAGTGCTCAGATGTGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: FTFFHQNFRATF*DVVLKCSDVAS Trigger: GGAAGCCACATCTGAGCACTTCAAGACGACATCGCAGAAGGTGGCTCGAAAATTCTGGTGGAAGAACGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263864.10 ENST00000432071.1 |
||
| CDS GCA 72 bp | TTCACGTTCTTCCACCAGAATTTTCGAGCCACCTTCTaGGATGTCGTCTTGAAGTGCTCAGACCAAGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: FTFFHQNFRATF*DVVLKCSDQEP Trigger: TGGCTCTTGGTCTGAGCACTTCAAGACGACATCGCAGAAGGTGGCTCGAAAATTCTGGTGGAAGAACGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| CDS CCA 72 bp | AACACAGAACTTGAGGCTCCAGACTTTGCTCAACTTTaGAGTTACTTCCTCCCTGAAACAGCTGGCCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: NTELEAPDFAQL*SYFLPETAGLS Trigger: GCTGAGGCCAGCTGTTTCAGGGAGGAAGTAACTCCAAAGTTGAGCAAAGTCTGGAGCCTCAAGTTCTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409760.1 |
||
| CDS CAA 90 bp | CTCCACATTCTGGGTCATAATATTCTTAACTCCCTCCACCTCACTTaGCAGGTTCCGCACACGATCATTTCCTCCACCTTCACTGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LHILGHNILNSLHLT*QVPHTIISSTFTGF Trigger: GAAGCCAGTGAAGGTGGAGGAAATGATCGTGTGCGGAACCTGCAAAGTGAGGTGGAGGGAGTTAAGAATATTATGACCCAGAATGTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||
| CDS CAA 72 bp | CTGGGTCATAATATTCTTAACTCCCTCCACCTCACTTaGCAGGTTCCGCACACGATCATTTCCTCCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LGHNILNSLHLT*QVPHTIISSTF Trigger: GAAGGTGGAGGAAATGATCGTGTGCGGAACCTGCAAAGTGAGGTGGAGGGAGTTAAGAATATTATGACCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263864.10 ENST00000409760.1 ENST00000432071.1 |
||