Pregenerated sensors for VAMP3 (Homo sapiens)
Ensembl gene IDs: ENSG00000049245Ensembl transcript IDs: ENST00000054666.11, ENST00000470357.1
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACATGGGTCTGGGCACTGTGGCCAAGGGGCGAGTACCAAGGTTTCTaGGTCAGACCCGGCCAGAGACCCTGCGCTGAAGGTGGACTAATG | + |
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Preference number: 1 (lower is better) Translates to: TWVWALWPRGEYQGF*VRPGQRPCAEGGLM Trigger: CATTAGTCCACCTTCAGCGCAGGGTCTCTGGCCGGGTCTGACTCAGAAACCTTGGTACTCGCCCCTTGGCCACAGTGCCCAGACCCATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR TCA 90 bp | AGTCCACAGCTGATAATCTGCCAACTGCTGGGTAGAACTCTTTTATaGGACGGTCAGAGTCTACCTCAAACCTTCTCTAACCCCCATGCA | + |
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Preference number: 1 (lower is better) Translates to: SPQLIICQLLGRTLL*DGQSLPQTFSNPHA Trigger: TGCATGGGGGTTAGAGAAGGTTTGAGGTAGACTCTGACCGTCTCATAAAAGAGTTCTACCCAGCAGTTGGCAGATTATCAGCTGTGGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR TCA 90 bp | CAGTTGATGATATCAAAGCAAAGGTCTCTGGTTGGCTACTCTCTGTaGAAAGAGCCATTCACCCCTGACCAATGCCTAATTGCAGGCATA | + |
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Preference number: 1 (lower is better) Translates to: QLMISKQRSLVGYSL*KEPFTPDQCLIAGI Trigger: TATGCCTGCAATTAGGCATTGGTCAGGGGTGAATGGCTCTTTTCACAGAGAGTAGCCAACCAGAGACCTTTGCTTTGATATCATCAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR TCA 90 bp | CTGGTGCGCCTCAGCTGTTGCTGCTTTATAAGTCATAATAGCATGTaGACAAGAGTTTTAGAATATTCCAGTAACAATGAGCCACAGAGC | + |
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Preference number: 1 (lower is better) Translates to: LVRLSCCCFISHNSM*TRVLEYSSNNEPQS Trigger: GCTCTGTGGCTCATTGTTACTGGAATATTCTAAAACTCTTGTTCACATGCTATTATGACTTATAAAGCAGCAACAGCTGAGGCGCACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR TCA 90 bp | AAGGTTCACACACAAGGTAATGATTTTAATTCTGAAGGGGCACCTTaGGTTCCATTTGGCACGTTTCTGAATTTAACTGTCAGGAATACA | + |
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Preference number: 1 (lower is better) Translates to: KVHTQGNDFNSEGAP*VPFGTFLNLTVRNT Trigger: TGTATTCCTGACAGTTAAATTCAGAAACGTGCCAAATGGAACTCAAGGTGCCCCTTCAGAATTAAAATCATTACCTTGTGTGTGAACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR-3UTR GCA 90 bp | TGCCAGCTGCTTTCTCCTCACAGCTGGCCACACCGCAAGGCATCTCTTCAACAGTCTGTAAAGGCACTGTaGAAAATGTGGACGGGGCCG | + |
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Preference number: 2 (lower is better) Translates to: CQLLSPHSWPHRKASLQQSVKAL*KMWTGP Trigger: CGGCCCCGTCCACATTTTGCACAGTGCCTTTACAGA...CTGTTGAAGAGATGCCTTGCGGTGTGGCCAGCTGTGAGGAGAAAGCAGCTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR-3UTR CCA 90 bp | GCCAGTGGGTTACATGGGTCTGGGCACTGTGGCCAAGGGGCGAGTACCAAGGTTGATCAAGTTCACAGGTaGTCTTACTTGAGGCTACAG | + |
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Preference number: 2 (lower is better) Translates to: ASGLHGSGHCGQGASTKVDQVHR*SYLRLQ Trigger: CTGTAGCCTCAAGTAAGACCACCTGTGAACTTGATC...AACCTTGGTACTCGCCCCTTGGCCACAGTGCCCAGACCCATGTAACCCACTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR-3UTR TCA 90 bp | GCCAGTGGGTTACATGGGTCTGGGCACTGTGGCCAAGGGGCGAGTACCAAGGTTCTTGAAGAGGTTTCTTaGACAGCAGTTTTGAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: ASGLHGSGHCGQGASTKVLEEVS*TAVLSS Trigger: GGAACTCAAAACTGCTGTTCAAGAAACCTCTTCAAG...AACCTTGGTACTCGCCCCTTGGCCACAGTGCCCAGACCCATGTAACCCACTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR-3UTR TCA 90 bp | GGAACAGACGTTAAAGAAATGGAAGCTGTGTCCTGGTGCGCCTCAGCTGTTGCTTCTGAAGGGGCACCTTaGGTTCCATTTGGCACGTTT | + |
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Preference number: 2 (lower is better) Translates to: GTDVKEMEAVSWCASAVASEGAP*VPFGTF Trigger: AAACGTGCCAAATGGAACTCAAGGTGCCCCTTCAGA...AGCAACAGCTGAGGCGCACCAGGACACAGCTTCCATTTCTTTAACGTCTGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR-3UTR GCA 90 bp | TGCCAGCTGCTTTCTCCTCACAGCTGGCCACACCGCAAGGCATCTCTTCAACAGCGCCTCAGCTGTTGCTaGTTTATAAGTCATAATAGC | + |
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Preference number: 2 (lower is better) Translates to: CQLLSPHSWPHRKASLQQRLSCC*FISHNS Trigger: GCTATTATGACTTATAAAGCAGCAACAGCTGAGGCG...CTGTTGAAGAGATGCCTTGCGGTGTGGCCAGCTGTGAGGAGAAAGCAGCTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR-3UTR CCA 90 bp | GCCAGTGGGTTACATGGGTCTGGGCACTGTGGCCAAGGGGCGAGTACCAAGGTTACCTTGAGTTCCATTTaGCACGTTTCTGAATTTAAC | + |
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Preference number: 2 (lower is better) Translates to: ASGLHGSGHCGQGASTKVTLSSI*HVSEFN Trigger: GTTAAATTCAGAAACGTGCCAAATGGAACTCAAGGT...AACCTTGGTACTCGCCCCTTGGCCACAGTGCCCAGACCCATGTAACCCACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR-3UTR CCA 90 bp | GGAACAGACGTTAAAGAAATGGAAGCTGTGTCCTGGTGCGCCTCAGCTGTTGCTCCCATCTTTAAGCTGTaGATCCTGATGTTGAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: GTDVKEMEAVSWCASAVAPIFKL*ILMLSL Trigger: GAGACTCAACATCAGGATCCACAGCTTAAAGATGGG...AGCAACAGCTGAGGCGCACCAGGACACAGCTTCCATTTCTTTAACGTCTGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR-3UTR TCA 90 bp | AGAAATGGAAGCTGTGTCCTGGTGCGCCTCAGCTGTTGCTGCTTTATAAGTCATCTAAGTCAAAAGTCTTaGAGAGGTTTCTTGAACAGC | + |
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Preference number: 2 (lower is better) Translates to: RNGSCVLVRLSCCCFISHLSQKS*RGFLNS Trigger: GCTGTTCAAGAAACCTCTTCAAGACTTTTGACTTAG...ATGACTTATAAAGCAGCAACAGCTGAGGCGCACCAGGACACAGCTTCCATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR-3UTR TCA 90 bp | GATATCAAAGCAAAGGTCTCTGGTTGGCTACTCTCTGTGAAAAGAGCCATTCACACAGGTGGTCTTACTTaGGGCTACAGAATTGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: DIKAKVSGWLLSVKRAIHTGGLT*GYRIVA Trigger: AGCAACAATTCTGTAGCCTCAAGTAAGACCACCTGT...GTGAATGGCTCTTTTCACAGAGAGTAGCCAACCAGAGACCTTTGCTTTGATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR-3UTR CCA 90 bp | AGAAATGGAAGCTGTGTCCTGGTGCGCCTCAGCTGTTGCTGCTTTATAAGTCATTTATCAGAAACATGCTaGAGTCCACAGCTGATAATC | + |
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Preference number: 2 (lower is better) Translates to: RNGSCVLVRLSCCCFISHLSETC*SPQLII Trigger: GATTATCAGCTGTGGACTCCAGCATGTTTCTGATAA...ATGACTTATAAAGCAGCAACAGCTGAGGCGCACCAGGACACAGCTTCCATTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR-3UTR CCA 90 bp | ACGGTCAGAGTCTACCTCAAACCTTCTCTAACCCCCATGCAAAATACTGAATCACTGGAAGGCATAAGTTaGAAATCTGATTACCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: TVRVYLKPSLTPMQNTESLEGIS*KSDYPK Trigger: CTTTGGGTAATCAGATTTCCAACTTATGCCTTCCAG...TGATTCAGTATTTTGCATGGGGGTTAGAGAAGGTTTGAGGTAGACTCTGACCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR-3UTR TCA 90 bp | ACAGTAAATCATTTCAGCGATGTTAAGGGAACAGACGTTAAAGAAATGGAAGCTAGGAAGAAAGGCCTATaGAGATGTAGAAGGTTCACA | + |
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Preference number: 2 (lower is better) Translates to: TVNHFSDVKGTDVKEMEARKKGL*RCRRFT Trigger: TGTGAACCTTCTACATCTTCATAGGCCTTTCTTCCT...AGCTTCCATTTCTTTAACGTCTGTTCCCTTAACATCGCTGAAATGATTTACTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR TCA 72 bp | TGGGCACTGTGGCCAAGGGGCGAGTACCAAGGTTTCTaGGTCAGACCCGGCCAGAGACCCTGCGCTGAAGGT | + |
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Preference number: 3 (lower is better) Translates to: WALWPRGEYQGF*VRPGQRPCAEG Trigger: ACCTTCAGCGCAGGGTCTCTGGCCGGGTCTGACTCAGAAACCTTGGTACTCGCCCCTTGGCCACAGTGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR-3UTR CAA 90 bp | TGCCAGCTGCTTTCTCCTCACAGCTGGCCACACCGCAAGGCATCTCTTCAACAGAGCAAAGGTCTCTGGTaGGCTACTCTCTGTGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: CQLLSPHSWPHRKASLQQSKGLW*ATLCEK Trigger: CTTTTCACAGAGAGTAGCCAACCAGAGACCTTTGCT...CTGTTGAAGAGATGCCTTGCGGTGTGGCCAGCTGTGAGGAGAAAGCAGCTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR CCA 72 bp | TCCCAGCTAAGTGCACAGATAGAAGCGAGGTATTTCTaGGTTAATGCAGGAGCCAGTGGGTTACATGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: SQLSAQIEARYF*VNAGASGLHGS Trigger: AGACCCATGTAACCCACTGGCTCCTGCATTAACCCAGAAATACCTCGCTTCTATCTGTGCACTTAGCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR CCA 72 bp | ATTTCAGCGATGTTAAGGGAACAGACGTTAAAGAAATaGAAGCTGTGTCCTGGTGCGCCTCAGCTGTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: ISAMLREQTLKK*KLCPGAPQLLL Trigger: CAGCAACAGCTGAGGCGCACCAGGACACAGCTTCCATTTCTTTAACGTCTGTTCCCTTAACATCGCTGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR-3UTR CAA 90 bp | ACTGAATCAGAAGGGGAGCCACACTGTCTACAGCCTTTCAAAAGGAAGAAAGGCGGCAAAATAGAAGCTTaGGTCATAGCCATAGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: TESEGEPHCLQPFKRKKGGKIEA*VIAIVL Trigger: AAGAACTATGGCTATGACCAAAGCTTCTATTTTGCC...GCCTTTCTTCCTTTTGAAAGGCTGTAGACAGTGTGGCTCCCCTTCTGATTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR TCA 72 bp | CTGATAATCTGCCAACTGCTGGGTAGAACTCTTTTATaGGACGGTCAGAGTCTACCTCAAACCTTCTCTAAC | + |
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Preference number: 3 (lower is better) Translates to: LIICQLLGRTLL*DGQSLPQTFSN Trigger: GTTAGAGAAGGTTTGAGGTAGACTCTGACCGTCTCATAAAAGAGTTCTACCCAGCAGTTGGCAGATTATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR TCA 72 bp | ATATCAAAGCAAAGGTCTCTGGTTGGCTACTCTCTGTaGAAAGAGCCATTCACCCCTGACCAATGCCTAATT | + |
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Preference number: 3 (lower is better) Translates to: ISKQRSLVGYSL*KEPFTPDQCLI Trigger: AATTAGGCATTGGTCAGGGGTGAATGGCTCTTTTCACAGAGAGTAGCCAACCAGAGACCTTTGCTTTGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR-3UTR CAA 90 bp | AAGGGGAGCCACACTGTCTACAGCCTTTCAAAAGGAAGAAAGGCCTATGAAGATTCTAAGTCAAAAGTCTaGAAGAGGTTTCTTGAACAG | + |
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Preference number: 3 (lower is better) Translates to: KGSHTVYSLSKGRKAYEDSKSKV*KRFLEQ Trigger: CTGTTCAAGAAACCTCTTCAAGACTTTTGACTTAGA...ATCTTCATAGGCCTTTCTTCCTTTTGAAAGGCTGTAGACAGTGTGGCTCCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR-3UTR CAA 90 bp | ACGGTCAGAGTCTACCTCAAACCTTCTCTAACCCCCATGCAAAATACTGAATCAATAAGGCACAGCCTGTaGTTATCACAGATTTGTGTT | + |
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Preference number: 3 (lower is better) Translates to: TVRVYLKPSLTPMQNTESIRHSL*LSQICV Trigger: AACACAAATCTGTGATAACAACAGGCTGTGCCTTAT...TGATTCAGTATTTTGCATGGGGGTTAGAGAAGGTTTGAGGTAGACTCTGACCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR-3UTR CAA 90 bp | ACAGTAAATCATTTCAGCGATGTTAAGGGAACAGACGTTAAAGAAATGGAAGCTCTGTGGATCCTGATGTaGAGTCTCATGCATACAAGA | + |
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Preference number: 3 (lower is better) Translates to: TVNHFSDVKGTDVKEMEALWILM*SLMHTR Trigger: TCTTGTATGCATGAGACTCAACATCAGGATCCACAG...AGCTTCCATTTCTTTAACGTCTGTTCCCTTAACATCGCTGAAATGATTTACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR TCA 72 bp | GGCCAGATAATGATCAAGTTCACAGGTGGTCTTACTTaGGGCTACAGAATTGTTGCTTGCATAATTATCAGA | + |
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Preference number: 3 (lower is better) Translates to: GQIMIKFTGGLT*GYRIVACIIIR Trigger: TCTGATAATTATGCAAGCAACAATTCTGTAGCCTCAAGTAAGACCACCTGTGAACTTGATCATTATCTGGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR TCA 72 bp | ACACAAGGTAATGATTTTAATTCTGAAGGGGCACCTTaGGTTCCATTTGGCACGTTTCTGAATTTAACTGTC | + |
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Preference number: 3 (lower is better) Translates to: TQGNDFNSEGAP*VPFGTFLNLTV Trigger: GACAGTTAAATTCAGAAACGTGCCAAATGGAACTCAAGGTGCCCCTTCAGAATTAAAATCATTACCTTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR GCA 90 bp | GCCAGTGGGTTACATGGGTCTGGGCACTGTGGCCAAGGGGCGAGTACCAAGGTTCCTAACACTGCCAGCTaGTTTCTCCTCACAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ASGLHGSGHCGQGASTKVPNTAS*FLLTAG Trigger: GCCAGCTGTGAGGAGAAAGCAGCTGGCAGTGTTAGG...AACCTTGGTACTCGCCCCTTGGCCACAGTGCCCAGACCCATGTAACCCACTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR GCA 90 bp | TGCCAGCTGCTTTCTCCTCACAGCTGGCCACACCGCAAGGCATCTCTTCAACAGCCCGGCCAGAGACCCTaGGCTGAAGGTGGACTAATG | + |
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Preference number: 4 (lower is better) Translates to: CQLLSPHSWPHRKASLQQPGQRP*AEGGLM Trigger: CATTAGTCCACCTTCAGCGCAGGGTCTCTGGCCGGG...CTGTTGAAGAGATGCCTTGCGGTGTGGCCAGCTGTGAGGAGAAAGCAGCTGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR TCA 90 bp | GCCAGTGGGTTACATGGGTCTGGGCACTGTGGCCAAGGGGCGAGTACCAAGGTTTCTGAAGGGGCACCTTaGGTTCCATTTGGCACGTTT | + |
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Preference number: 4 (lower is better) Translates to: ASGLHGSGHCGQGASTKVSEGAP*VPFGTF Trigger: AAACGTGCCAAATGGAACTCAAGGTGCCCCTTCAGA...AACCTTGGTACTCGCCCCTTGGCCACAGTGCCCAGACCCATGTAACCCACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR GCA 90 bp | GCCAGTGGGTTACATGGGTCTGGGCACTGTGGCCAAGGGGCGAGTACCAAGGTTCCTCTTCAACTTGGCTaGGCTCGTTTCAAATTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ASGLHGSGHCGQGASTKVPLQLG*ARFKLR Trigger: TCTCAATTTGAAACGAGCGCAGCCAAGTTGAAGAGG...AACCTTGGTACTCGCCCCTTGGCCACAGTGCCCAGACCCATGTAACCCACTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR GCA 90 bp | GGAACAGACGTTAAAGAAATGGAAGCTGTGTCCTGGTGCGCCTCAGCTGTTGCTAAATTGAGAAGCGCCTaGCTGCAGTGCGTCTGCACG | + |
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Preference number: 4 (lower is better) Translates to: GTDVKEMEAVSWCASAVAKLRSA*LQCVCT Trigger: CGTGCAGACGCACTGCAGGCAGGCGCTTCTCAATTT...AGCAACAGCTGAGGCGCACCAGGACACAGCTTCCATTTCTTTAACGTCTGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR GCA 90 bp | GCCAGTGGGTTACATGGGTCTGGGCACTGTGGCCAAGGGGCGAGTACCAAGGTTTTCACCCCTGACCAATaGCTAATTGCAGGCATAATT | + |
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Preference number: 4 (lower is better) Translates to: ASGLHGSGHCGQGASTKVFTPDQ*LIAGII Trigger: AATTATGCCTGCAATTAGGCATTGGTCAGGGGTGAA...AACCTTGGTACTCGCCCCTTGGCCACAGTGCCCAGACCCATGTAACCCACTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CCA 90 bp | GGAACAGACGTTAAAGAAATGGAAGCTGTGTCCTGGTGCGCCTCAGCTGTTGCTATGGAAGCTGTGTCCTaGTGCGCCTCAGCTGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: GTDVKEMEAVSWCASAVAMEAVS*CASAVA Trigger: AGCAACAGCTGAGGCGCACCAGGACACAGCTTCCAT...AGCAACAGCTGAGGCGCACCAGGACACAGCTTCCATTTCTTTAACGTCTGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CCA 90 bp | ACTGAATCAGAAGGGGAGCCACACTGTCTACAGCCTTTCAAAAGGAAGAAAGGCTGGGTCTGGGCACTGTaGCCAAGGGGCGAGTACCAA | + |
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Preference number: 4 (lower is better) Translates to: TESEGEPHCLQPFKRKKGWVWAL*PRGEYQ Trigger: TTGGTACTCGCCCCTTGGCCACAGTGCCCAGACCCA...GCCTTTCTTCCTTTTGAAAGGCTGTAGACAGTGTGGCTCCCCTTCTGATTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR GCA 90 bp | ACTGAATCAGAAGGGGAGCCACACTGTCTACAGCCTTTCAAAAGGAAGAAAGGCGAAGCTGTGTCCTGGTaGGCCTCAGCTGTTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: TESEGEPHCLQPFKRKKGEAVSW*ASAVAA Trigger: AGCAGCAACAGCTGAGGCGCACCAGGACACAGCTTC...GCCTTTCTTCCTTTTGAAAGGCTGTAGACAGTGTGGCTCCCCTTCTGATTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CCA 90 bp | GCCAGTGGGTTACATGGGTCTGGGCACTGTGGCCAAGGGGCGAGTACCAAGGTTAGTTTTGAGTTCCGCTaGTTCTTCATGAAGAGACAA | + |
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Preference number: 4 (lower is better) Translates to: ASGLHGSGHCGQGASTKVSFEFR*FFMKRQ Trigger: TTGTCTCTTCATGAAGAACCAGCGGAACTCAAAACT...AACCTTGGTACTCGCCCCTTGGCCACAGTGCCCAGACCCATGTAACCCACTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CCA 90 bp | ATCTGTAAAGGCACTGTGCAAAATGTGGACGGGGCCGGCCTTCTAATTTGGAGTCTTTCTCCTCACAGCTaGCCACACCGCAAGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: ICKGTVQNVDGAGLLIWSLSPHS*PHRKAS Trigger: AGATGCCTTGCGGTGTGGCCAGCTGTGAGGAGAAAG...ACTCCAAATTAGAAGGCCGGCCCCGTCCACATTTTGCACAGTGCCTTTACAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CCA 90 bp | ACGGTCAGAGTCTACCTCAAACCTTCTCTAACCCCCATGCAAAATACTGAATCATGGGTTACATGGGTCTaGGCACTGTGGCCAAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: TVRVYLKPSLTPMQNTESWVTWV*ALWPRG Trigger: GCCCCTTGGCCACAGTGCCCAGACCCATGTAACCCA...TGATTCAGTATTTTGCATGGGGGTTAGAGAAGGTTTGAGGTAGACTCTGACCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR GCA 90 bp | GTTCCATTTGGCACGTTTCTGAATTTAACTGTCAGGAATACACTTAAGGCCATTAGACATTTTGGCAGCTaGGGCGGCGGCAGCGGCGAC | + |
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Preference number: 4 (lower is better) Translates to: VPFGTFLNLTVRNTLKAIRHFGS*GGGSGD Trigger: GTCGCCGCTGCCGCCGCCGCAGCTGCCAAAATGTCT...AATGGCCTTAAGTGTATTCCTGACAGTTAAATTCAGAAACGTGCCAAATGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CCA 90 bp | GATATCAAAGCAAAGGTCTCTGGTTGGCTACTCTCTGTGAAAAGAGCCATTCACAGCCAGTGGGTTACATaGGTCTGGGCACTGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: DIKAKVSGWLLSVKRAIHSQWVT*VWALWP Trigger: TGGCCACAGTGCCCAGACCCATGTAACCCACTGGCT...GTGAATGGCTCTTTTCACAGAGAGTAGCCAACCAGAGACCTTTGCTTTGATATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR TCA 90 bp | GCACTCTGGAACTTAAGAAGGCCTCTTCATCAGCCCATACGTAAATCTGTAAAGCCAGAGACCCTGCGCTaGAGGTGGACTAATGTCCTA | + |
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Preference number: 4 (lower is better) Translates to: ALWNLRRPLHQPIRKSVKPETLR*RWTNVL Trigger: TAGGACATTAGTCCACCTTCAGCGCAGGGTCTCTGG...CTTTACAGATTTACGTATGGGCTGATGAAGAGGCCTTCTTAAGTTCCAGAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR TCA 90 bp | GATATCAAAGCAAAGGTCTCTGGTTGGCTACTCTCTGTGAAAAGAGCCATTCACGAGTACCAAGGTTTCTaGGTCAGACCCGGCCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: DIKAKVSGWLLSVKRAIHEYQGF*VRPGQR Trigger: TCTCTGGCCGGGTCTGACTCAGAAACCTTGGTACTC...GTGAATGGCTCTTTTCACAGAGAGTAGCCAACCAGAGACCTTTGCTTTGATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR TCA 90 bp | AAGGGGAGCCACACTGTCTACAGCCTTTCAAAAGGAAGAAAGGCCTATGAAGATGTTGGCTACTCTCTGTaGAAAGAGCCATTCACCCCT | + |
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Preference number: 4 (lower is better) Translates to: KGSHTVYSLSKGRKAYEDVGYSL*KEPFTP Trigger: AGGGGTGAATGGCTCTTTTCACAGAGAGTAGCCAAC...ATCTTCATAGGCCTTTCTTCCTTTTGAAAGGCTGTAGACAGTGTGGCTCCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CCA 90 bp | ATCTGTAAAGGCACTGTGCAAAATGTGGACGGGGCCGGCCTTCTAATTTGGAGTCCCATCTTTAAGCTGTaGATCCTGATGTTGAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: ICKGTVQNVDGAGLLIWSPIFKL*ILMLSL Trigger: GAGACTCAACATCAGGATCCACAGCTTAAAGATGGG...ACTCCAAATTAGAAGGCCGGCCCCGTCCACATTTTGCACAGTGCCTTTACAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR TCA 90 bp | ACGGTCAGAGTCTACCTCAAACCTTCTCTAACCCCCATGCAAAATACTGAATCATCCGCTGGTTCTTCATaGAGAGACAACCCACACGAT | + |
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Preference number: 4 (lower is better) Translates to: TVRVYLKPSLTPMQNTESSAGSS*RDNPHD Trigger: ATCGTGTGGGTTGTCTCTTCATGAAGAACCAGCGGA...TGATTCAGTATTTTGCATGGGGGTTAGAGAAGGTTTGAGGTAGACTCTGACCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR TCA 90 bp | ATCTGTAAAGGCACTGTGCAAAATGTGGACGGGGCCGGCCTTCTAATTTGGAGTCTTGAAGAGGTTTCTTaGACAGCAGTTTTGAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: ICKGTVQNVDGAGLLIWSLEEVS*TAVLSS Trigger: GGAACTCAAAACTGCTGTTCAAGAAACCTCTTCAAG...ACTCCAAATTAGAAGGCCGGCCCCGTCCACATTTTGCACAGTGCCTTTACAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR GCA 90 bp | GCACTCTGGAACTTAAGAAGGCCTCTTCATCAGCCCATACGTAAATCTGTAAAGGAAGTCTTCGATTACTaGCAGTGGCAGCAGTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALWNLRRPLHQPIRKSVKEVFDY*QWQQLD Trigger: GTCCAACTGCTGCCACTGGCAGTAATCGAAGACTTC...CTTTACAGATTTACGTATGGGCTGATGAAGAGGCCTTCTTAAGTTCCAGAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CCA 90 bp | ACAGTAAATCATTTCAGCGATGTTAAGGGAACAGACGTTAAAGAAATGGAAGCTGCAGAGAAGCGAAGTTaGGACCGGAGGCCAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: TVNHFSDVKGTDVKEMEAAEKRS*DRRPGR Trigger: TCTCCCTGGCCTCCGGTCCCAACTTCGCTTCTCTGC...AGCTTCCATTTCTTTAACGTCTGTTCCCTTAACATCGCTGAAATGATTTACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CCA 90 bp | TTCCCATCAACAGCATTCTCTGCAGTTGATGATATCAAAGCAAAGGTCTCTGGTGCCAGTGGCAGCAGTTaGACCTGTAGACATTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPSTAFSAVDDIKAKVSGASGSS*TCRHFG Trigger: GCCAAAATGTCTACAGGTCCAACTGCTGCCACTGGC...ACCAGAGACCTTTGCTTTGATATCATCAACTGCAGAGAATGCTGTTGATGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CCA 90 bp | AAGGGGAGCCACACTGTCTACAGCCTTTCAAAAGGAAGAAAGGCCTATGAAGATCAGACGTTAAAGAAATaGAAGCTGTGTCCTGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KGSHTVYSLSKGRKAYEDQTLKK*KLCPGA Trigger: CGCACCAGGACACAGCTTCCATTTCTTTAACGTCTG...ATCTTCATAGGCCTTTCTTCCTTTTGAAAGGCTGTAGACAGTGTGGCTCCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR TCA 90 bp | GTTCCATTTGGCACGTTTCTGAATTTAACTGTCAGGAATACACTTAAGGCCATTGCGCTCGTTTCAAATTaGGAAGCGCCTGCCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: VPFGTFLNLTVRNTLKAIALVSN*EAPACS Trigger: ACTGCAGGCAGGCGCTTCTCAATTTGAAACGAGCGC...AATGGCCTTAAGTGTATTCCTGACAGTTAAATTCAGAAACGTGCCAAATGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR TCA 90 bp | AGAAATGGAAGCTGTGTCCTGGTGCGCCTCAGCTGTTGCTGCTTTATAAGTCATAGGAAGAAAGGCCTATaGAGATGTAGAAGGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RNGSCVLVRLSCCCFISHRKKGL*RCRRFT Trigger: TGTGAACCTTCTACATCTTCATAGGCCTTTCTTCCT...ATGACTTATAAAGCAGCAACAGCTGAGGCGCACCAGGACACAGCTTCCATTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR TCA 90 bp | GGAACAGACGTTAAAGAAATGGAAGCTGTGTCCTGGTGCGCCTCAGCTGTTGCTAACACTTTATTTAGGTaGTTACAGTGGGTAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTDVKEMEAVSWCASAVANTLFR*LQWVSS Trigger: GGAACTTACCCACTGTAATCACCTAAATAAAGTGTT...AGCAACAGCTGAGGCGCACCAGGACACAGCTTCCATTTCTTTAACGTCTGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR GCA 90 bp | ATCTGTAAAGGCACTGTGCAAAATGTGGACGGGGCCGGCCTTCTAATTTGGAGTCGATTGCCCACATCTTaGAATTCTTCCACCAATATT | + |
|
Preference number: 4 (lower is better) Translates to: ICKGTVQNVDGAGLLIWSRLPTS*NSSTNI Trigger: AATATTGGTGGAAGAATTGCAAGATGTGGGCAATCG...ACTCCAAATTAGAAGGCCGGCCCCGTCCACATTTTGCACAGTGCCTTTACAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CCA 90 bp | AAGGGGAGCCACACTGTCTACAGCCTTTCAAAAGGAAGAAAGGCCTATGAAGATGATCAAGTTCACAGGTaGTCTTACTTGAGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: KGSHTVYSLSKGRKAYEDDQVHR*SYLRLQ Trigger: CTGTAGCCTCAAGTAAGACCACCTGTGAACTTGATC...ATCTTCATAGGCCTTTCTTCCTTTTGAAAGGCTGTAGACAGTGTGGCTCCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CCA 90 bp | ACGGTCAGAGTCTACCTCAAACCTTCTCTAACCCCCATGCAAAATACTGAATCAGAAGCGAGGTATTTCTaGGTTAATGCAGGAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TVRVYLKPSLTPMQNTESEARYF*VNAGAS Trigger: ACTGGCTCCTGCATTAACCCAGAAATACCTCGCTTC...TGATTCAGTATTTTGCATGGGGGTTAGAGAAGGTTTGAGGTAGACTCTGACCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| 3UTR CAA 72 bp | TGCTTCCAGCATTCCCATCAACAGCATTCTCTGCAGTaGATGATATCAAAGCAAAGGTCTCTGGTTGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: CFQHSHQQHSLQ*MISKQRSLVGY Trigger: GTAGCCAACCAGAGACCTTTGCTTTGATATCATCAACTGCAGAGAATGCTGTTGATGGGAATGCTGGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR GCA 90 bp | AAGGGGAGCCACACTGTCTACAGCCTTTCAAAAGGAAGAAAGGCCTATGAAGATCGCCTCAGCTGTTGCTaGTTTATAAGTCATAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGSHTVYSLSKGRKAYEDRLSCC*FISHNS Trigger: GCTATTATGACTTATAAAGCAGCAACAGCTGAGGCG...ATCTTCATAGGCCTTTCTTCCTTTTGAAAGGCTGTAGACAGTGTGGCTCCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CCA 90 bp | AGAAATGGAAGCTGTGTCCTGGTGCGCCTCAGCTGTTGCTGCTTTATAAGTCATCTGGAAGGCATAAGTTaGAAATCTGATTACCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RNGSCVLVRLSCCCFISHLEGIS*KSDYPK Trigger: CTTTGGGTAATCAGATTTCCAACTTATGCCTTCCAG...ATGACTTATAAAGCAGCAACAGCTGAGGCGCACCAGGACACAGCTTCCATTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR TCA 90 bp | ACAGTAAATCATTTCAGCGATGTTAAGGGAACAGACGTTAAAGAAATGGAAGCTAGAGCCATTCACCCCTaGCCAATGCCTAATTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVNHFSDVKGTDVKEMEARAIHP*PMPNCR Trigger: CCTGCAATTAGGCATTGGTCAGGGGTGAATGGCTCT...AGCTTCCATTTCTTTAACGTCTGTTCCCTTAACATCGCTGAAATGATTTACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR GCA 90 bp | GCACTCTGGAACTTAAGAAGGCCTCTTCATCAGCCCATACGTAAATCTGTAAAGGTGCGCCTCAGCTGTTaGTGCTTTATAAGTCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALWNLRRPLHQPIRKSVKVRLSC*CFISHN Trigger: ATTATGACTTATAAAGCAGCAACAGCTGAGGCGCAC...CTTTACAGATTTACGTATGGGCTGATGAAGAGGCCTTCTTAAGTTCCAGAGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CCA 90 bp | AAGGGGAGCCACACTGTCTACAGCCTTTCAAAAGGAAGAAAGGCCTATGAAGATATTTCCTCTTCAACTTaGCTGCGCTCGTTTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: KGSHTVYSLSKGRKAYEDISSST*LRSFQI Trigger: AATTTGAAACGAGCGCAGCCAAGTTGAAGAGGAAAT...ATCTTCATAGGCCTTTCTTCCTTTTGAAAGGCTGTAGACAGTGTGGCTCCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR GCA 90 bp | ACGGTCAGAGTCTACCTCAAACCTTCTCTAACCCCCATGCAAAATACTGAATCAAACAGTAATCCCGATTaGCCACATCTTGCAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVRVYLKPSLTPMQNTESNSNPD*PHLAIL Trigger: AAGAATTGCAAGATGTGGGCAATCGGGATTACTGTT...TGATTCAGTATTTTGCATGGGGGTTAGAGAAGGTTTGAGGTAGACTCTGACCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR GCA 90 bp | GTTCCATTTGGCACGTTTCTGAATTTAACTGTCAGGAATACACTTAAGGCCATTCCCTCAGTGCCTCCTTaGCTGTTTTCTTTCATACCT | + |
|
Preference number: 4 (lower is better) Translates to: VPFGTFLNLTVRNTLKAIPSVPP*LFSFIP Trigger: AGGTATGAAAGAAAACAGGCAAGGAGGCACTGAGGG...AATGGCCTTAAGTGTATTCCTGACAGTTAAATTCAGAAACGTGCCAAATGGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR TCA 90 bp | TTCCCATCAACAGCATTCTCTGCAGTTGATGATATCAAAGCAAAGGTCTCTGGTCTAAGTCAAAAGTCTTaGAGAGGTTTCTTGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPSTAFSAVDDIKAKVSGLSQKS*RGFLNS Trigger: GCTGTTCAAGAAACCTCTTCAAGACTTTTGACTTAG...ACCAGAGACCTTTGCTTTGATATCATCAACTGCAGAGAATGCTGTTGATGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CCA 90 bp | TTCCCATCAACAGCATTCTCTGCAGTTGATGATATCAAAGCAAAGGTCTCTGGTTTATCAGAAACATGCTaGAGTCCACAGCTGATAATC | + |
|
Preference number: 4 (lower is better) Translates to: FPSTAFSAVDDIKAKVSGLSETC*SPQLII Trigger: GATTATCAGCTGTGGACTCCAGCATGTTTCTGATAA...ACCAGAGACCTTTGCTTTGATATCATCAACTGCAGAGAATGCTGTTGATGGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR TCA 90 bp | ACAGTAAATCATTTCAGCGATGTTAAGGGAACAGACGTTAAAGAAATGGAAGCTGGTAGAACTCTTTTATaGGACGGTCAGAGTCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: TVNHFSDVKGTDVKEMEAGRTLL*DGQSLP Trigger: AGGTAGACTCTGACCGTCTCATAAAAGAGTTCTACC...AGCTTCCATTTCTTTAACGTCTGTTCCCTTAACATCGCTGAAATGATTTACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR TCA 90 bp | ACAGTAAATCATTTCAGCGATGTTAAGGGAACAGACGTTAAAGAAATGGAAGCTACAGGTGGTCTTACTTaGGGCTACAGAATTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVNHFSDVKGTDVKEMEATGGLT*GYRIVA Trigger: AGCAACAATTCTGTAGCCTCAAGTAAGACCACCTGT...AGCTTCCATTTCTTTAACGTCTGTTCCCTTAACATCGCTGAAATGATTTACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CCA 90 bp | ACAGTAAATCATTTCAGCGATGTTAAGGGAACAGACGTTAAAGAAATGGAAGCTGCAAAGGTCTCTGGTTaGCTACTCTCTGTGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVNHFSDVKGTDVKEMEAAKVSG*LLSVKR Trigger: TCTTTTCACAGAGAGTAGCCAACCAGAGACCTTTGC...AGCTTCCATTTCTTTAACGTCTGTTCCCTTAACATCGCTGAAATGATTTACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CAA 90 bp | GCCAGTGGGTTACATGGGTCTGGGCACTGTGGCCAAGGGGCGAGTACCAAGGTTTGCGCTCGTTTCAAATaGAGAAGCGCCTGCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ASGLHGSGHCGQGASTKVCARFK*RSACLQ Trigger: CTGCAGGCAGGCGCTTCTCAATTTGAAACGAGCGCA...AACCTTGGTACTCGCCCCTTGGCCACAGTGCCCAGACCCATGTAACCCACTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS CCA 90 bp | ATTTTGTGTCTGCTGAAGTCTTCGATTACTGCCAGTGGCAGCAGTTaGACCTGTAGACATTTTGGCAGCTGCGGCGGCGGCAGCGGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: ILCLLKSSITASGSS*TCRHFGSCGGGSGD Trigger: GTCGCCGCTGCCGCCGCCGCAGCTGCCAAAATGTCTACAGGTCCAACTGCTGCCACTGGCAGTAATCGAAGACTTCAGCAGACACAAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CAA 90 bp | GCCAGTGGGTTACATGGGTCTGGGCACTGTGGCCAAGGGGCGAGTACCAAGGTTTCTCTTTCCAGAACCTaGTCCACGTTAACTCGCATT | + |
|
Preference number: 5 (lower is better) Translates to: ASGLHGSGHCGQGASTKVSLSRT*STLTRI Trigger: AATGCGAGTTAACGTGGACAAGGTTCTGGAAAGAGA...AACCTTGGTACTCGCCCCTTGGCCACAGTGCCCAGACCCATGTAACCCACTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CAA 90 bp | GATATCAAAGCAAAGGTCTCTGGTTGGCTACTCTCTGTGAAAAGAGCCATTCACAGCAGAGAAGCGAAGTaGGGACCGGAGGCCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DIKAKVSGWLLSVKRAIHSREAK*GPEARE Trigger: CTCCCTGGCCTCCGGTCCCAACTTCGCTTCTCTGCT...GTGAATGGCTCTTTTCACAGAGAGTAGCCAACCAGAGACCTTTGCTTTGATATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CAA 90 bp | TGCCAGCTGCTTTCTCCTCACAGCTGGCCACACCGCAAGGCATCTCTTCAACAGCTGTGGATCCTGATGTaGAGTCTCATGCATACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CQLLSPHSWPHRKASLQQLWILM*SLMHTR Trigger: TCTTGTATGCATGAGACTCAACATCAGGATCCACAG...CTGTTGAAGAGATGCCTTGCGGTGTGGCCAGCTGTGAGGAGAAAGCAGCTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS TCA 90 bp | ACAGAAACAGAGTCAGGAACACTGGGATGCAGGGAGTGGGTGGTGTaGGTGGAAAGGTGTGTTGAAGAAATGCCTCCTCTTTTAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TETESGTLGCREWVV*VERCVEEMPPLLGR Trigger: CCTTCCTAAAAGAGGAGGCATTTCTTCAACACACCTTTCCACTCACACCACCCACTCCCTGCATCCCAGTGTTCCTGACTCTGTTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470357.1 |
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| CDS-3UTR CAA 90 bp | GGAACAGACGTTAAAGAAATGGAAGCTGTGTCCTGGTGCGCCTCAGCTGTTGCTTATTTCCTCTTCAACTaGGCTGCGCTCGTTTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GTDVKEMEAVSWCASAVAYFLFN*AALVSN Trigger: ATTTGAAACGAGCGCAGCCAAGTTGAAGAGGAAATA...AGCAACAGCTGAGGCGCACCAGGACACAGCTTCCATTTCTTTAACGTCTGTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CAA 90 bp | AAGGGGAGCCACACTGTCTACAGCCTTTCAAAAGGAAGAAAGGCCTATGAAGATAGCAAAGGTCTCTGGTaGGCTACTCTCTGTGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KGSHTVYSLSKGRKAYEDSKGLW*ATLCEK Trigger: CTTTTCACAGAGAGTAGCCAACCAGAGACCTTTGCT...ATCTTCATAGGCCTTTCTTCCTTTTGAAAGGCTGTAGACAGTGTGGCTCCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CAA 90 bp | GGAACAGACGTTAAAGAAATGGAAGCTGTGTCCTGGTGCGCCTCAGCTGTTGCTTCTAAGTCAAAAGTCTaGAAGAGGTTTCTTGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: GTDVKEMEAVSWCASAVASKSKV*KRFLEQ Trigger: CTGTTCAAGAAACCTCTTCAAGACTTTTGACTTAGA...AGCAACAGCTGAGGCGCACCAGGACACAGCTTCCATTTCTTTAACGTCTGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS TCA 90 bp | GGTTCTAAGTCAAAAGTCTTGAAGAGGTTTCTTGAACAGCAGTTTTaGGTTCCGCTGGTTCTTCATGAAGAGACAACCCACACGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: GSKSKVLKRFLEQQF*VPLVLHEETTHTMM Trigger: CATCATCGTGTGGGTTGTCTCTTCATGAAGAACCAGCGGAACTCAAAACTGCTGTTCAAGAAACCTCTTCAAGACTTTTGACTTAGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000054666.11 ENST00000470357.1 |
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| CDS-3UTR CAA 90 bp | ACGGTCAGAGTCTACCTCAAACCTTCTCTAACCCCCATGCAAAATACTGAATCACTCATCTACTTGATTTaGTGTCTGCTGAAGTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: TVRVYLKPSLTPMQNTESLIYLI*CLLKSS Trigger: CGAAGACTTCAGCAGACACAAAATCAAGTAGATGAG...TGATTCAGTATTTTGCATGGGGGTTAGAGAAGGTTTGAGGTAGACTCTGACCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CAA 90 bp | GATATCAAAGCAAAGGTCTCTGGTTGGCTACTCTCTGTGAAAAGAGCCATTCACATAAGGCACAGCCTGTaGTTATCACAGATTTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: DIKAKVSGWLLSVKRAIHIRHSL*LSQICV Trigger: AACACAAATCTGTGATAACAACAGGCTGTGCCTTAT...GTGAATGGCTCTTTTCACAGAGAGTAGCCAACCAGAGACCTTTGCTTTGATATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CAA 90 bp | GTTCCATTTGGCACGTTTCTGAATTTAACTGTCAGGAATACACTTAAGGCCATTCACAGGTGGTCTTACTaGAGGCTACAGAATTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VPFGTFLNLTVRNTLKAIHRWSY*RLQNCC Trigger: GCAACAATTCTGTAGCCTCAAGTAAGACCACCTGTG...AATGGCCTTAAGTGTATTCCTGACAGTTAAATTCAGAAACGTGCCAAATGGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CAA 90 bp | TTCCCATCAACAGCATTCTCTGCAGTTGATGATATCAAAGCAAAGGTCTCTGGTCAGCATTCTCTGCAGTaGATGATATCAAAGCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FPSTAFSAVDDIKAKVSGQHSLQ*MISKQR Trigger: CCTTTGCTTTGATATCATCAACTGCAGAGAATGCTG...ACCAGAGACCTTTGCTTTGATATCATCAACTGCAGAGAATGCTGTTGATGGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CAA 90 bp | GTTCCATTTGGCACGTTTCTGAATTTAACTGTCAGGAATACACTTAAGGCCATTCCGATTGCCCACATCTaGCAATTCTTCCACCAATAT | + |
|
Preference number: 5 (lower is better) Translates to: VPFGTFLNLTVRNTLKAIPIAHI*QFFHQY Trigger: ATATTGGTGGAAGAATTGCAAGATGTGGGCAATCGG...AATGGCCTTAAGTGTATTCCTGACAGTTAAATTCAGAAACGTGCCAAATGGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS-3UTR CAA 90 bp | ACAGTAAATCATTTCAGCGATGTTAAGGGAACAGACGTTAAAGAAATGGAAGCTCACCACCTCATCTACTaGATTTTGTGTCTGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TVNHFSDVKGTDVKEMEAHHLIY*ILCLLK Trigger: CTTCAGCAGACACAAAATCAAGTAGATGAGGTGGTG...AGCTTCCATTTCTTTAACGTCTGTTCCCTTAACATCGCTGAAATGATTTACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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| CDS CCA 72 bp | CTGCTGAAGTCTTCGATTACTGCCAGTGGCAGCAGTTaGACCTGTAGACATTTTGGCAGCTGCGGCGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLKSSITASGSS*TCRHFGSCGGG Trigger: GCCGCCGCCGCAGCTGCCAAAATGTCTACAGGTCCAACTGCTGCCACTGGCAGTAATCGAAGACTTCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000054666.11 |
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