Pregenerated sensors for VAMP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000220205Ensembl transcript IDs: ENST00000316509.11, ENST00000404970.3, ENST00000481878.1, ENST00000488857.5
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACACACACGGACACACACACACACGGATCCAGGGGAGTGGGGGCTaGAAGATATGGCTGAGAGGTGGAGGAACGGCTGAGGGTTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: HTHGHTHTRIQGSGG*KIWLRGGGTAEGWG Trigger: CCCCCAACCCTCAGCCGTTCCTCCACCTCTCAGCCATATCTTTCAGCCCCCACTCCCCTGGATCCGTGTGTGTGTGTGTCCGTGTGTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000316509.11 ENST00000404970.3 |
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| 3UTR CCA 90 bp | CCCACACACACACTGGTAGCCACCCCTCTCACAAGAGATCAATTGTaGCCAACCCCCAACTCTCCTGGTGGGAGGAGGAGGTGGATCAGG | + |
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Preference number: 1 (lower is better) Translates to: PTHTLVATPLTRDQL*PTPNSPGGRRRWIR Trigger: CCTGATCCACCTCCTCCTCCCACCAGGAGAGTTGGGGGTTGGCCACAATTGATCTCTTGTGAGAGGGGTGGCTACCAGTGTGTGTGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR TCA 90 bp | CCATGGTATGGCCTTGAAGCCACAGACCCTAATCCTCTGAGCCTCTaGGACCGCAAGCTCTCAAATAATGGGGTGGTTGGCTTCCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: PWYGLEATDPNPLSL*DRKLSNNGVVGFLV Trigger: GACCAGGAAGCCAACCACCCCATTATTTGAGAGCTTGCGGTCTCAGAGGCTCAGAGGATTAGGGTCTGTGGCTTCAAGGCCATACCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| 3UTR TCA 90 bp | CTTCCGCTCCATGGTATGGCCTTGAAGCCACAGACCCTAATCCTCTaGGCCTCTGAGACCGCAAGCTCTCAAATAATGGGGTGGTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: LPLHGMALKPQTLIL*ASETASSQIMGWLA Trigger: AGCCAACCACCCCATTATTTGAGAGCTTGCGGTCTCAGAGGCTCAGAGGATTAGGGTCTGTGGCTTCAAGGCCATACCATGGAGCGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| 3UTR CCA 90 bp | AACATGCTGGACGCTCCCAAAGACCTTGGGATTCTTAGGACCAAGTaGGGCCAGTCTCAGAGCCTCCCAATGGATACAAAGAAGATGTAC | + |
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Preference number: 1 (lower is better) Translates to: NMLDAPKDLGILRTK*GQSQSLPMDTKKMY Trigger: GTACATCTTCTTTGTATCCATTGGGAGGCTCTGAGACTGGCCCCACTTGGTCCTAAGAATCCCAAGGTCTTTGGGAGCGTCCAGCATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR CCA 90 bp | TTCCAGGGTTCTCAGACTGGGCTCTTAGGCCTAAAGGGTCCTCAATaGATACACCAGCTTTCCTATTTCCAAATGTTAACAAGACTGCCA | + |
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Preference number: 1 (lower is better) Translates to: FQGSQTGLLGLKGPQ*IHQLSYFQMLTRLP Trigger: TGGCAGTCTTGTTAACATTTGGAAATAGGAAAGCTGGTGTATCCATTGAGGACCCTTTAGGCCTAAGAGCCCAGTCTGAGAACCCTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| 3UTR-3UTR GCA 90 bp | GACACACACACGGACACACACACACACGGATCCAGGGGAGTGGGGGCTGAAAGATGTCAGGCCTGGCCCTaGTCCAATCCTCCCCACTCC | + |
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Preference number: 2 (lower is better) Translates to: DTHTDTHTHGSRGVGAERCQAWP*SNPPHS Trigger: GGAGTGGGGAGGATTGGAGCAGGGCCAGGCCTGACA...TCTTTCAGCCCCCACTCCCCTGGATCCGTGTGTGTGTGTGTCCGTGTGTGTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| 3UTR-3UTR CCA 90 bp | GAAGAAAGTTTGGGGGCCCCCTCCCGTGGCAGGTTAAGGGACTGTACCCTCAAAGGGACCAGAGCAGCCTaGTTCCCCAAAAGCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: EESLGAPSRGRLRDCTLKGTRAA*FPKSPG Trigger: GCCTGGGCTTTTGGGGAACCAGGCTGCTCTGGTCCC...TTTGAGGGTACAGTCCCTTAACCTGCCACGGGAGGGGGCCCCCAAACTTTCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR-3UTR TCA 90 bp | GAAGAAAGTTTGGGGGCCCCCTCCCGTGGCAGGTTAAGGGACTGTACCCTCAAAGGCAAGAGAGAGGGGTaGAGGGAACCTCAGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: EESLGAPSRGRLRDCTLKGKREG*REPQEG Trigger: CCCTTCCTGAGGTTCCCTTCACCCCTCTCTCTTGCC...TTTGAGGGTACAGTCCCTTAACCTGCCACGGGAGGGGGCCCCCAAACTTTCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGACAATAGACCCTTCCTCAATCAGTTCACCCAATGAGAGGACAGCTCTCGGGGATTCTCTGCCCTaGCCCACTCCTCCCCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: KKTIDPSSISSPNERTALGDSLP*PTPPQG Trigger: GCCTTGGGGAGGAGTGGGGCAGGGCAGAGAATCCCC...GAGAGCTGTCCTCTCATTGGGTGAACTGATTGAGGAAGGGTCTATTGTCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR-3UTR CCA 90 bp | ACACACACGGACACACACACACACGGATCCAGGGGAGTGGGGGCTGAAAGATATAAAGGAAGGCCAGGGTaGGAGGAAGGATCAGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: THTDTHTHGSRGVGAERYKGRPG*EEGSAK Trigger: TTTAGCTGATCCTTCCTCCCACCCTGGCCTTCCTTT...ATATCTTTCAGCCCCCACTCCCCTGGATCCGTGTGTGTGTGTGTCCGTGTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000316509.11 ENST00000404970.3 |
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| 3UTR-3UTR CCA 90 bp | GACACACACACGGACACACACACACACGGATCCAGGGGAGTGGGGGCTGAAAGAGCTGACACCCTCTCTTaGACTCAGTTTTTCCATCTA | + |
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Preference number: 2 (lower is better) Translates to: DTHTDTHTHGSRGVGAERADTLS*TQFFHL Trigger: TAGATGGAAAAACTGAGTCCAAGAGAGGGTGTCAGC...TCTTTCAGCCCCCACTCCCCTGGATCCGTGTGTGTGTGTGTCCGTGTGTGTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| 3UTR-3UTR TCA 90 bp | CTCCCAATGGATACAAAGAAGATGTACCTAAGGAAGCCTGGACAGGTGCTGTTGGCTGAAAGATATGGCTaGGAGGTGGAGGAACGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LPMDTKKMYLRKPGQVLLAERYG*EVEERL Trigger: CAGCCGTTCCTCCACCTCTCAGCCATATCTTTCAGC...CAACAGCACCTGTCCAGGCTTCCTTAGGTACATCTTCTTTGTATCCATTGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR-3UTR GCA 90 bp | CGTGGCAGGTTAAGGGACTGTACCCTCAAACCCTTAAAATTGTGCCATTTAAAAGCTAGGAGGAGGCAATaGTGGGGACCAGAGCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: RGRLRDCTLKPLKLCHLKARRRQ*WGPEQP Trigger: AGGCTGCTCTGGTCCCCAGCATTGCCTCCTCCTAGC...TTTTAAATGGCACAATTTTAAGGGTTTGAGGGTACAGTCCCTTAACCTGCCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR-3UTR TCA 90 bp | CCATTTAAAAAGACAATAGACCCTTCCTCAATCAGTTCACCCAATGAGAGGACAAACCCCCAGCAGGGGTaGGGCCAGAGATTTCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: PFKKTIDPSSISSPNERTNPQQG*GQRFQA Trigger: TGCCTGAAATCTCTGGCCTCACCCCTGCTGGGGGTT...TGTCCTCTCATTGGGTGAACTGATTGAGGAAGGGTCTATTGTCTTTTTAAATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR-3UTR CCA 90 bp | CTTACATACCAGCTGGGGGAGGGAGAGGAGGGTACAAGAGGTTTGGAAAATGAGCTCAGAGCCTCCCAATaGATACAAAGAAGATGTACC | + |
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Preference number: 2 (lower is better) Translates to: LTYQLGEGEEGTRGLENELRASQ*IQRRCT Trigger: GGTACATCTTCTTTGTATCCATTGGGAGGCTCTGAG...CTCATTTTCCAAACCTCTTGTACCCTCCTCTCCCTCCCCCAGCTGGTATGTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR-3UTR CCA 90 bp | CGTGGCAGGTTAAGGGACTGTACCCTCAAACCCTTAAAATTGTGCCATTTAAAAAACCCCCAACTCTCCTaGTGGGAGGAGGAGGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: RGRLRDCTLKPLKLCHLKNPQLS*WEEEVD Trigger: ATCCACCTCCTCCTCCCACCAGGAGAGTTGGGGGTT...TTTTAAATGGCACAATTTTAAGGGTTTGAGGGTACAGTCCCTTAACCTGCCACG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCCACTCCTCAATTCCAGGGTTCTCAGACTGGGCTCTTAGGCCTAAAGGGTGTATAAATAACAGCTaGCTATTTACAGGGGGACAC | + |
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Preference number: 2 (lower is better) Translates to: FSHSSIPGFSDWALRPKGCINNS*LFTGGH Trigger: GTGTCCCCCTGTAAATAGCCAGCTGTTATTTATACA...CCCTTTAGGCCTAAGAGCCCAGTCTGAGAACCCTGGAATTGAGGAGTGGGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| 3UTR-3UTR CCA 90 bp | ACATTTATTGTACATTTTCACAATCTGGATGCGCCACAGAATTGGGGGCATGGGATTCTTAGGACCAAGTaGGGCCAGTCTCAGAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: TFIVHFHNLDAPQNWGHGILRTK*GQSQSL Trigger: GAGGCTCTGAGACTGGCCCCACTTGGTCCTAAGAAT...CCCATGCCCCCAATTCTGTGGCGCATCCAGATTGTGAAAATGTACAATAAATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR-3UTR CCA 90 bp | ACATTTATTGTACATTTTCACAATCTGGATGCGCCACAGAATTGGGGGCATGGGATTTCAGGCAGGAATTaGGGGGATTCTCTGCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: TFIVHFHNLDAPQNWGHGISGRN*GDSLPC Trigger: GCAGGGCAGAGAATCCCCCCAATTCCTGCCTGAAAT...CCCATGCCCCCAATTCTGTGGCGCATCCAGATTGTGAAAATGTACAATAAATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGACAATAGACCCTTCCTCAATCAGTTCACCCAATGAGAGGACAGCTCTCCATAGCAGATGCAAATaGAGGGACTTGGGGCTAGTC | + |
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Preference number: 2 (lower is better) Translates to: KKTIDPSSISSPNERTALHSRCK*RDLGLV Trigger: GACTAGCCCCAAGTCCCTTCATTTGCATCTGCTATG...GAGAGCTGTCCTCTCATTGGGTGAACTGATTGAGGAAGGGTCTATTGTCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR-3UTR TCA 90 bp | ATACACCAGCTTTCCTATTTCCAAATGTTAACAAGACTGCCAAGAACTAGGCAAGCTGAAAGATATGGCTaGGAGGTGGAGGAACGGCTG | + |
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Preference number: 2 (lower is better) Translates to: IHQLSYFQMLTRLPRTRQAERYG*EVEERL Trigger: CAGCCGTTCCTCCACCTCTCAGCCATATCTTTCAGC...TTGCCTAGTTCTTGGCAGTCTTGTTAACATTTGGAAATAGGAAAGCTGGTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| 3UTR-3UTR CCA 90 bp | CCATTTAAAAAGACAATAGACCCTTCCTCAATCAGTTCACCCAATGAGAGGACAAAAGGAAGGCCAGGGTaGGAGGAAGGATCAGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: PFKKTIDPSSISSPNERTKGRPG*EEGSAK Trigger: TTTAGCTGATCCTTCCTCCCACCCTGGCCTTCCTTT...TGTCCTCTCATTGGGTGAACTGATTGAGGAAGGGTCTATTGTCTTTTTAAATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR-3UTR CCA 90 bp | CTTACATACCAGCTGGGGGAGGGAGAGGAGGGTACAAGAGGTTTGGAAAATGAGTGGAACAAAAAGAAATaGAAAGGGATAGCAGTATGT | + |
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Preference number: 2 (lower is better) Translates to: LTYQLGEGEEGTRGLENEWNKKK*KGIAVC Trigger: ACATACTGCTATCCCTTTCCATTTCTTTTTGTTCCA...CTCATTTTCCAAACCTCTTGTACCCTCCTCTCCCTCCCCCAGCTGGTATGTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR-3UTR CCA 90 bp | AAAAAGACAATAGACCCTTCCTCAATCAGTTCACCCAATGAGAGGACAGCTCTCAGGGTACAAGAGGTTTaGAAAATGAGGGTAAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: KKTIDPSSISSPNERTALRVQEV*KMRVRE Trigger: CTCCCTTACCCTCATTTTCCAAACCTCTTGTACCCT...GAGAGCTGTCCTCTCATTGGGTGAACTGATTGAGGAAGGGTCTATTGTCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR-3UTR TCA 90 bp | CGTGGCAGGTTAAGGGACTGTACCCTCAAACCCTTAAAATTGTGCCATTTAAAACATGGGAATGTCAGTTaGGTACCCCACATGAAAACT | + |
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Preference number: 2 (lower is better) Translates to: RGRLRDCTLKPLKLCHLKHGNVS*VPHMKT Trigger: AGTTTTCATGTGGGGTACTCAACTGACATTCCCATG...TTTTAAATGGCACAATTTTAAGGGTTTGAGGGTACAGTCCCTTAACCTGCCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR-3UTR TCA 90 bp | GTGAAGGGAACCTCAGGAAGGGGTGTTAAGGACAACCGGAAAAATCATCTAGTAGTTTTTGGCTCTAGATaGATCAGAATTGCCATTAGC | + |
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Preference number: 2 (lower is better) Translates to: VKGTSGRGVKDNRKNHLVVFGSR*IRIAIS Trigger: GCTAATGGCAATTCTGATTCATCTAGAGCCAAAAAC...TACTAGATGATTTTTCCGGTTGTCCTTAACACCCCTTCCTGAGGTTCCCTTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGACAATAGACCCTTCCTCAATCAGTTCACCCAATGAGAGGACAGCTCTCAAGGAGAGGGACTATTaGATAGCAGATGCAAATGAA | + |
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Preference number: 2 (lower is better) Translates to: KKTIDPSSISSPNERTALKERDY*IADANE Trigger: TTCATTTGCATCTGCTATGCAATAGTCCCTCTCCTT...GAGAGCTGTCCTCTCATTGGGTGAACTGATTGAGGAAGGGTCTATTGTCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR-3UTR CCA 90 bp | ATACACCAGCTTTCCTATTTCCAAATGTTAACAAGACTGCCAAGAACTAGGCAAAAACCTAGAATCCACTaGGGAAACCTCTCCAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: IHQLSYFQMLTRLPRTRQKPRIH*GNLSRE Trigger: TTCCCTGGAGAGGTTTCCCCAGTGGATTCTAGGTTT...TTGCCTAGTTCTTGGCAGTCTTGTTAACATTTGGAAATAGGAAAGCTGGTGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| 3UTR-3UTR CCA 90 bp | GGAACCTCAGGAAGGGGTGTTAAGGACAACCGGAAAAATCATCTAGTAATAAAATCTCAAATAATGGGGTaGTTGGCTTCCTGGTCATGT | + |
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Preference number: 2 (lower is better) Translates to: GTSGRGVKDNRKNHLVIKSQIMG*LASWSC Trigger: ACATGACCAGGAAGCCAACCACCCCATTATTTGAGA...TTTTATTACTAGATGATTTTTCCGGTTGTCCTTAACACCCCTTCCTGAGGTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| 3UTR-3UTR CCA 90 bp | TTTTTGGCTCTAGATGAATCAGAATTGCCATTAGCAGCTATATGTGTTTTTGGCAAACCTAGAATCCACTaGGGAAACCTCTCCAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: FLALDESELPLAAICVFGKPRIH*GNLSRE Trigger: TTCCCTGGAGAGGTTTCCCCAGTGGATTCTAGGTTT...GCCAAAAACACATATAGCTGCTAATGGCAATTCTGATTCATCTAGAGCCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000404970.3 ENST00000481878.1 |
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| 3UTR-3UTR CCA 90 bp | GGAACCTCAGGAAGGGGTGTTAAGGACAACCGGAAAAATCATCTAGTAATAAAACTAAAGGGTCCTCAATaGATACACCAGCTTTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: GTSGRGVKDNRKNHLVIKLKGPQ*IHQLSY Trigger: ATAGGAAAGCTGGTGTATCCATTGAGGACCCTTTAG...TTTTATTACTAGATGATTTTTCCGGTTGTCCTTAACACCCCTTCCTGAGGTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGGTTAAGGGACTGTACCCTCAAACCCTTAAAATTGTGCCATTTAAAAAGTGTATAAATAACAGCTaGCTATTTACAGGGGGACAC | + |
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Preference number: 2 (lower is better) Translates to: WQVKGLYPQTLKIVPFKKCINNS*LFTGGH Trigger: GTGTCCCCCTGTAAATAGCCAGCTGTTATTTATACA...CTTTTTAAATGGCACAATTTTAAGGGTTTGAGGGTACAGTCCCTTAACCTGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR CCA 72 bp | ACACTGGTAGCCACCCCTCTCACAAGAGATCAATTGTaGCCAACCCCCAACTCTCCTGGTGGGAGGAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: TLVATPLTRDQL*PTPNSPGGRRR Trigger: CCTCCTCCTCCCACCAGGAGAGTTGGGGGTTGGCCACAATTGATCTCTTGTGAGAGGGGTGGCTACCAGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR-3UTR CAA 90 bp | AGGCAAACTGGACTAGAGGGGCTAGGAGGAGGCAATGCTGGGGACCAGAGCAGCACGCTCCCAAAGACCTaGGGATTCTTAGGACCAAGT | + |
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Preference number: 3 (lower is better) Translates to: RQTGLEGLGGGNAGDQSSTLPKT*GFLGPS Trigger: ACTTGGTCCTAAGAATCCCAAGGTCTTTGGGAGCGT...GCTGCTCTGGTCCCCAGCATTGCCTCCTCCTAGCCCCTCTAGTCCAGTTTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR TCA 72 bp | GGCCTTGAAGCCACAGACCCTAATCCTCTGAGCCTCTaGGACCGCAAGCTCTCAAATAATGGGGTGGTTGGC | + |
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Preference number: 3 (lower is better) Translates to: GLEATDPNPLSL*DRKLSNNGVVG Trigger: GCCAACCACCCCATTATTTGAGAGCTTGCGGTCTCAGAGGCTCAGAGGATTAGGGTCTGTGGCTTCAAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| 3UTR CCA 72 bp | GCTAGACAGGTAGGTTCTGAGGTCCCTTCCGCTCCATaGTATGGCCTTGAAGCCACAGACCCTAATCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: ARQVGSEVPSAP*YGLEATDPNPL Trigger: CAGAGGATTAGGGTCTGTGGCTTCAAGGCCATACCATGGAGCGGAAGGGACCTCAGAACCTACCTGTCTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| 3UTR CCA 72 bp | ACCAGCTGGGGGAGGGAGAGGAGGGTACAAGAGGTTTaGAAAATGAGGGTAAGGGAGGCAAACTGGACTAGA | + |
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Preference number: 3 (lower is better) Translates to: TSWGRERRVQEV*KMRVREANWTR Trigger: TCTAGTCCAGTTTGCCTCCCTTACCCTCATTTTCCAAACCTCTTGTACCCTCCTCTCCCTCCCCCAGCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR TCA 72 bp | AAGAAAGGGAAAGGGAAGGAAGGCAAGAGAGAGGGGTaGAGGGAACCTCAGGAAGGGGTGTTAAGGACAACC | + |
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Preference number: 3 (lower is better) Translates to: KKGKGKEGKREG*REPQEGVLRTT Trigger: GGTTGTCCTTAACACCCCTTCCTGAGGTTCCCTTCACCCCTCTCTCTTGCCTTCCTTCCCTTTCCCTTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316509.11 ENST00000404970.3 |
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| 3UTR TCA 72 bp | AGTGCTGAAGTAAACTGTGGAGAGAGGGGAAGAAGATaGGGAAGAGGGAGAGGGGAGAGAAAGAGAGAGAAC | + |
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Preference number: 3 (lower is better) Translates to: SAEVNCGERGRR*GRGRGERKREN Trigger: GTTCTCTCTCTTTCTCTCCCCTCTCCCTCTTCCTCATCTTCTTCCCCTCTCTCCACAGTTTACTTCAGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| 3UTR-3UTR CAA 90 bp | AAAAAGACAATAGACCCTTCCTCAATCAGTTCACCCAATGAGAGGACAGCTCTCAGTCCCATACACACATaGGCAGTGACTAGTACCCCC | + |
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Preference number: 3 (lower is better) Translates to: KKTIDPSSISSPNERTALSPIHT*AVTSTP Trigger: GGGGGTACTAGTCACTGCCAATGTGTGTATGGGACT...GAGAGCTGTCCTCTCATTGGGTGAACTGATTGAGGAAGGGTCTATTGTCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| 3UTR TCA 72 bp | AGGAAAGGAGAGGGACTATTGCATAGCAGATGCAAATaGAGGGACTTGGGGCTAGTCAGGAAGAAAGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: RKGEGLLHSRCK*RDLGLVRKKGK Trigger: TTTCCCTTTCTTCCTGACTAGCCCCAAGTCCCTTCATTTGCATCTGCTATGCAATAGTCCCTCTCCTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316509.11 ENST00000404970.3 |
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| 3UTR-3UTR CAA 90 bp | ATACACCAGCTTTCCTATTTCCAAATGTTAACAAGACTGCCAAGAACTAGGCAACTAGATGAATCAGAATaGCCATTAGCAGCTATATGT | + |
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Preference number: 3 (lower is better) Translates to: IHQLSYFQMLTRLPRTRQLDESE*PLAAIC Trigger: ACATATAGCTGCTAATGGCAATTCTGATTCATCTAG...TTGCCTAGTTCTTGGCAGTCTTGTTAACATTTGGAAATAGGAAAGCTGGTGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| 3UTR TCA 72 bp | TGCAGGCTAAATAACATCAAAGTTTTTGGCTCTAGATaGATCAGAATTGCCATTAGCAGCTATATGTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: CRLNNIKVFGSR*IRIAISSYMCF Trigger: AAAACACATATAGCTGCTAATGGCAATTCTGATTCATCTAGAGCCAAAAACTTTGATGTTATTTAGCCTGCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| CDS-3UTR CCA 90 bp | GAAGAAAGTTTGGGGGCCCCCTCCCGTGGCAGGTTAAGGGACTGTACCCTCAAAGGCGGGGGCAGCGGGTaGAGGACTTGGCAGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: EESLGAPSRGRLRDCTLKGGGSG*RTWQRQ Trigger: CTGCCGCTGCCAAGTCCTCCACCCGCTGCCCCCGCC...TTTGAGGGTACAGTCCCTTAACCTGCCACGGGAGGGGGCCCCCAAACTTTCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR CCA 90 bp | AAACCTAGAATCCACTGGGGAAACCTCTCCAGGGAAAGGGCCCCGGCCATTCTCGGCGGGGGCAGCGGGTaGAGGACTTGGCAGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KPRIHWGNLSRERAPAILGGGSG*RTWQRQ Trigger: CTGCCGCTGCCAAGTCCTCCACCCGCTGCCCCCGCC...GAGAATGGCCGGGGCCCTTTCCCTGGAGAGGTTTCCCCAGTGGATTCTAGGTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000481878.1 |
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| CDS-3UTR GCA 90 bp | AGGCAAACTGGACTAGAGGGGCTAGGAGGAGGCAATGCTGGGGACCAGAGCAGCGGGGATTCTCTGCCCTaGCCCACTCCTCCCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: RQTGLEGLGGGNAGDQSSGDSLP*PTPPQG Trigger: GCCTTGGGGAGGAGTGGGGCAGGGCAGAGAATCCCC...GCTGCTCTGGTCCCCAGCATTGCCTCCTCCTAGCCCCTCTAGTCCAGTTTGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR GCA 90 bp | GAAGAAAGTTTGGGGGCCCCCTCCCGTGGCAGGTTAAGGGACTGTACCCTCAAAGAGGTTTGGAGGGGGTaGAGGGGGACCACCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: EESLGAPSRGRLRDCTLKEVWRG*RGTTLP Trigger: GGGGAGGGTGGTCCCCCTGCACCCCCTCCAAACCTC...TTTGAGGGTACAGTCCCTTAACCTGCCACGGGAGGGGGCCCCCAAACTTTCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR GCA 90 bp | AAACCTAGAATCCACTGGGGAAACCTCTCCAGGGAAAGGGCCCCGGCCATTCTCGAGGTTTGGAGGGGGTaGAGGGGGACCACCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KPRIHWGNLSRERAPAILEVWRG*RGTTLP Trigger: GGGGAGGGTGGTCCCCCTGCACCCCCTCCAAACCTC...GAGAATGGCCGGGGCCCTTTCCCTGGAGAGGTTTCCCCAGTGGATTCTAGGTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000404970.3 ENST00000481878.1 |
||
| CDS-3UTR TCA 90 bp | AGGCAAACTGGACTAGAGGGGCTAGGAGGAGGCAATGCTGGGGACCAGAGCAGCAACCCCCAGCAGGGGTaGGGCCAGAGATTTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQTGLEGLGGGNAGDQSSNPQQG*GQRFQA Trigger: TGCCTGAAATCTCTGGCCTCACCCCTGCTGGGGGTT...GCTGCTCTGGTCCCCAGCATTGCCTCCTCCTAGCCCCTCTAGTCCAGTTTGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR GCA 90 bp | CTCTCACAAGAGATCAATTGTGGCCAACCCCCAACTCTCCTGGTGGGAGGAGGAGGCCCCCGCCTGGAGTaGATCTGCACGGTCGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSQEINCGQPPTLLVGGGGPRLE*ICTVVQ Trigger: CTGGACGACCGTGCAGATGCACTCCAGGCGGGGGCC...TCCTCCTCCCACCAGGAGAGTTGGGGGTTGGCCACAATTGATCTCTTGTGAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR CCA 90 bp | CTCTCACAAGAGATCAATTGTGGCCAACCCCCAACTCTCCTGGTGGGAGGAGGATGGGAGGCCCCCGCCTaGAGTGCATCTGCACGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSQEINCGQPPTLLVGGGWEAPA*SASARS Trigger: CGACCGTGCAGATGCACTCCAGGCGGGGGCCTCCCA...TCCTCCTCCCACCAGGAGAGTTGGGGGTTGGCCACAATTGATCTCTTGTGAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR CCA 90 bp | AGGCAAACTGGACTAGAGGGGCTAGGAGGAGGCAATGCTGGGGACCAGAGCAGCGCGCTTGTTTCAAACTaGGAGGCCCCCGCCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RQTGLEGLGGGNAGDQSSALVSN*EAPAWS Trigger: ACTCCAGGCGGGGGCCTCCCAGTTTGAAACAAGCGC...GCTGCTCTGGTCCCCAGCATTGCCTCCTCCTAGCCCCTCTAGTCCAGTTTGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR GCA 90 bp | GACACACACACGGACACACACACACACGGATCCAGGGGAGTGGGGGCTGAAAGAGCTAGGAGGAGGCAATaGTGGGGACCAGAGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DTHTDTHTHGSRGVGAERARRRQ*WGPEQP Trigger: AGGCTGCTCTGGTCCCCAGCATTGCCTCCTCCTAGC...TCTTTCAGCCCCCACTCCCCTGGATCCGTGTGTGTGTGTGTCCGTGTGTGTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR GCA 90 bp | ACACACACGGACACACACACACACGGATCCAGGGGAGTGGGGGCTGAAAGATATCGCCTGGAGTGCATCTaGACGGTCGTCCAGCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: THTDTHTHGSRGVGAERYRLECI*TVVQLR Trigger: TCGGAGCTGGACGACCGTGCAGATGCACTCCAGGCG...ATATCTTTCAGCCCCCACTCCCCTGGATCCGTGTGTGTGTGTGTCCGTGTGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000316509.11 ENST00000404970.3 |
||
| CDS-3UTR CCA 90 bp | AAACCTAGAATCCACTGGGGAAACCTCTCCAGGGAAAGGGCCCCGGCCATTCTCGTTACTGGTGAGGTTTaGAGGGGGTGCAGGGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: KPRIHWGNLSRERAPAILVTGEV*RGCRGT Trigger: GGTCCCCCTGCACCCCCTCCAAACCTCACCAGTAAC...GAGAATGGCCGGGGCCCTTTCCCTGGAGAGGTTTCCCCAGTGGATTCTAGGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000404970.3 ENST00000481878.1 |
||
| CDS-3UTR CCA 90 bp | AAACCTAGAATCCACTGGGGAAACCTCTCCAGGGAAAGGGCCCCGGCCATTCTCACCACCTCATCCACCTaGGCCTGGGTCTGCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KPRIHWGNLSRERAPAILTTSST*AWVCCS Trigger: ACTGCAGCAGACCCAGGCCCAGGTGGATGAGGTGGT...GAGAATGGCCGGGGCCCTTTCCCTGGAGAGGTTTCCCCAGTGGATTCTAGGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000404970.3 ENST00000481878.1 |
||
| CDS-3UTR CCA 90 bp | ACACACACGGACACACACACACACGGATCCAGGGGAGTGGGGGCTGAAAGATATGGGACCAGAGCAGCCTaGTTCCCCAAAAGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: THTDTHTHGSRGVGAERYGTRAA*FPKSPG Trigger: GCCTGGGCTTTTGGGGAACCAGGCTGCTCTGGTCCC...ATATCTTTCAGCCCCCACTCCCCTGGATCCGTGTGTGTGTGTGTCCGTGTGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR CCA 90 bp | GACACACACACGGACACACACACACACGGATCCAGGGGAGTGGGGGCTGAAAGAGGGTGGTTGGCTTCCTaGTCATGTCTCAAGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTHTDTHTHGSRGVGAERGWLAS*SCLKPL Trigger: CAGGGGCTTGAGACATGACCAGGAAGCCAACCACCC...TCTTTCAGCCCCCACTCCCCTGGATCCGTGTGTGTGTGTGTCCGTGTGTGTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000404970.3 |
||
| CDS-3UTR TCA 90 bp | AAACCTAGAATCCACTGGGGAAACCTCTCCAGGGAAAGGGCCCCGGCCATTCTCGTCTCCTGTTACTGGTaGGGTTTGGAGGGGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPRIHWGNLSRERAPAILVSCYW*GLEGVQ Trigger: CTGCACCCCCTCCAAACCTCACCAGTAACAGGAGAC...GAGAATGGCCGGGGCCCTTTCCCTGGAGAGGTTTCCCCAGTGGATTCTAGGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000404970.3 ENST00000481878.1 |
||
| CDS-3UTR TCA 90 bp | GACACACACACGGACACACACACACACGGATCCAGGGGAGTGGGGGCTGAAAGAGCTGAAAGATATGGCTaGGAGGTGGAGGAACGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTHTDTHTHGSRGVGAERAERYG*EVEERL Trigger: CAGCCGTTCCTCCACCTCTCAGCCATATCTTTCAGC...TCTTTCAGCCCCCACTCCCCTGGATCCGTGTGTGTGTGTGTCCGTGTGTGTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000316509.11 ENST00000404970.3 |
||
| CDS-3UTR CCA 90 bp | GACACACACACGGACACACACACACACGGATCCAGGGGAGTGGGGGCTGAAAGAGTAAGGGAGGCAAACTaGACTAGAGGGGCTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DTHTDTHTHGSRGVGAERVREAN*TRGARR Trigger: CCTCCTAGCCCCTCTAGTCCAGTTTGCCTCCCTTAC...TCTTTCAGCCCCCACTCCCCTGGATCCGTGTGTGTGTGTGTCCGTGTGTGTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR CCA 90 bp | GTAAGGGAGGCAAACTGGACTAGAGGGGCTAGGAGGAGGCAATGCTGGGGACCACACTTACATACCAGCTaGGGGAGGGAGAGGAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VREANWTRGARRRQCWGPHLHTS*GRERRV Trigger: TACCCTCCTCTCCCTCCCCCAGCTGGTATGTAAGTG...TGGTCCCCAGCATTGCCTCCTCCTAGCCCCTCTAGTCCAGTTTGCCTCCCTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR CCA 90 bp | CTTACATACCAGCTGGGGGAGGGAGAGGAGGGTACAAGAGGTTTGGAAAATGAGGGGGGCCCCCTCCCGTaGCAGGTTAAGGGACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LTYQLGEGEEGTRGLENEGGPLP*QVKGLY Trigger: GTACAGTCCCTTAACCTGCCACGGGAGGGGGCCCCC...CTCATTTTCCAAACCTCTTGTACCCTCCTCTCCCTCCCCCAGCTGGTATGTAAG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR GCA 90 bp | CTTACATACCAGCTGGGGGAGGGAGAGGAGGGTACAAGAGGTTTGGAAAATGAGCGCCTGGAGTGCATCTaGACGGTCGTCCAGCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LTYQLGEGEEGTRGLENERLECI*TVVQLR Trigger: TCGGAGCTGGACGACCGTGCAGATGCACTCCAGGCG...CTCATTTTCCAAACCTCTTGTACCCTCCTCTCCCTCCCCCAGCTGGTATGTAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR GCA 90 bp | TCTCAAATAATGGGGTGGTTGGCTTCCTGGTCATGTCTCAAGCCCCTGGTCCTTTGTCAGGCCTGGCCCTaGTCCAATCCTCCCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQIMGWLASWSCLKPLVLCQAWP*SNPPHS Trigger: GGAGTGGGGAGGATTGGAGCAGGGCCAGGCCTGACA...AAGGACCAGGGGCTTGAGACATGACCAGGAAGCCAACCACCCCATTATTTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000404970.3 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGAACAAGAAAGCAGTGTGTCAGGCCTGGCCCTGCTCCAATCCTCCCCCCAACCCATCACCGCTaGTGGATGTCTCAGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RERTRKQCVRPGPAPILPPTHHR*WMSQRK Trigger: CTTCCTCTGAGACATCCACCAGCGGTGATGGGTTGG...GGGGAGGATTGGAGCAGGGCCAGGCCTGACACACTGCTTTCTTGTTCTCTCTCT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000404970.3 |
||
| CDS-3UTR TCA 90 bp | GGGATTCTTAGGACCAAGTGGGGCCAGTCTCAGAGCCTCCCAATGGATACAAAGGTCTCCTGTTACTGGTaGGGTTTGGAGGGGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GILRTKWGQSQSLPMDTKVSCYW*GLEGVQ Trigger: CTGCACCCCCTCCAAACCTCACCAGTAACAGGAGAC...CTTTGTATCCATTGGGAGGCTCTGAGACTGGCCCCACTTGGTCCTAAGAATCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR TCA 90 bp | CTTACATACCAGCTGGGGGAGGGAGAGGAGGGTACAAGAGGTTTGGAAAATGAGGGCAAGAGAGAGGGGTaGAGGGAACCTCAGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTYQLGEGEEGTRGLENEGKREG*REPQEG Trigger: CCCTTCCTGAGGTTCCCTTCACCCCTCTCTCTTGCC...CTCATTTTCCAAACCTCTTGTACCCTCCTCTCCCTCCCCCAGCTGGTATGTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR TCA 90 bp | GACACACACACGGACACACACACACACGGATCCAGGGGAGTGGGGGCTGAAAGAAATCCTCTGAGCCTCTaGGACCGCAAGCTCTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: DTHTDTHTHGSRGVGAERNPLSL*DRKLSN Trigger: ATTTGAGAGCTTGCGGTCTCAGAGGCTCAGAGGATT...TCTTTCAGCCCCCACTCCCCTGGATCCGTGTGTGTGTGTGTCCGTGTGTGTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000404970.3 |
||
| CDS-3UTR CCA 90 bp | CTTACATACCAGCTGGGGGAGGGAGAGGAGGGTACAAGAGGTTTGGAAAATGAGACCACCTCATCCACCTaGGCCTGGGTCTGCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LTYQLGEGEEGTRGLENETTSST*AWVCCS Trigger: ACTGCAGCAGACCCAGGCCCAGGTGGATGAGGTGGT...CTCATTTTCCAAACCTCTTGTACCCTCCTCTCCCTCCCCCAGCTGGTATGTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR CCA 90 bp | ACACACACGGACACACACACACACGGATCCAGGGGAGTGGGGGCTGAAAGATATAGCAGACTGCTAGGGTaGAGAGGAGTGGGGGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: THTDTHTHGSRGVGAERYSRLLG*RGVGEI Trigger: AATCTCCCCCACTCCTCTCCACCCTAGCAGTCTGCT...ATATCTTTCAGCCCCCACTCCCCTGGATCCGTGTGTGTGTGTGTCCGTGTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000404970.3 |
||
| 3UTR CAA 72 bp | GCCTCTGAGACCGCAAGCTCTCAAATAATGGGGTGGTaGGCTTCCTGGTCATGTCTCAAGCCCCTGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASETASSQIMGW*ASWSCLKPLVL Trigger: AAGGACCAGGGGCTTGAGACATGACCAGGAAGCCAACCACCCCATTATTTGAGAGCTTGCGGTCTCAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404970.3 |
||
| CDS-3UTR TCA 90 bp | TCTCAGACTGGGCTCTTAGGCCTAAAGGGTCCTCAATGGATACACCAGCTTTCCGTCTCCTGTTACTGGTaGGGTTTGGAGGGGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQTGLLGLKGPQWIHQLSVSCYW*GLEGVQ Trigger: CTGCACCCCCTCCAAACCTCACCAGTAACAGGAGAC...GGAAAGCTGGTGTATCCATTGAGGACCCTTTAGGCCTAAGAGCCCAGTCTGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000404970.3 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAACAAGAAAGCAGTGTGTCAGGCCTGGCCCTGCTCCAATCCTCCCCACCAGTATTTGCGCTTaGGCTTGGCTGCGCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RERTRKQCVRPGPAPILPTSICA*AWLRLF Trigger: AAACAAGCGCAGCCAAGCTCAAGCGCAAATACTGGT...GGGGAGGATTGGAGCAGGGCCAGGCCTGACACACTGCTTTCTTGTTCTCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404970.3 |
||
| CDS-3UTR CCA 90 bp | ACACACACGGACACACACACACACGGATCCAGGGGAGTGGGGGCTGAAAGATATGGGAGGGAAACCCCATaGGAATGTCAGTTGAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: THTDTHTHGSRGVGAERYGRETP*ECQLST Trigger: GGTACTCAACTGACATTCCCATGGGGTTTCCCTCCC...ATATCTTTCAGCCCCCACTCCCCTGGATCCGTGTGTGTGTGTGTCCGTGTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR CCA 90 bp | GACTGGGCTCTTAGGCCTAAAGGGTCCTCAATGGATACACCAGCTTTCCTATTTGCAGTGTGTCAGGCCTaGCCCTGCTCCAATCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DWALRPKGSSMDTPAFLFAVCQA*PCSNPP Trigger: GGGAGGATTGGAGCAGGGCCAGGCCTGACACACTGC...AAATAGGAAAGCTGGTGTATCCATTGAGGACCCTTTAGGCCTAAGAGCCCAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404970.3 |
||
| CDS-3UTR TCA 90 bp | CTCTCACAAGAGATCAATTGTGGCCAACCCCCAACTCTCCTGGTGGGAGGAGGAACCAGTATTTGCGCTTaGGCTTGGCTGCGCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSQEINCGQPPTLLVGGGTSICA*AWLRLF Trigger: AAACAAGCGCAGCCAAGCTCAAGCGCAAATACTGGT...TCCTCCTCCCACCAGGAGAGTTGGGGGTTGGCCACAATTGATCTCTTGTGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR GCA 90 bp | GGCCTAAAGGGTCCTCAATGGATACACCAGCTTTCCTATTTCCAAATGTTAACAGGCCCCCGCCTGGAGTaGATCTGCACGGTCGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLKGPQWIHQLSYFQMLTGPRLE*ICTVVQ Trigger: CTGGACGACCGTGCAGATGCACTCCAGGCGGGGGCC...TGTTAACATTTGGAAATAGGAAAGCTGGTGTATCCATTGAGGACCCTTTAGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000404970.3 |
||
| CDS-3UTR CCA 90 bp | GACTGGGCTCTTAGGCCTAAAGGGTCCTCAATGGATACACCAGCTTTCCTATTTGCGCTTGTTTCAAACTaGGAGGCCCCCGCCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: DWALRPKGSSMDTPAFLFALVSN*EAPAWS Trigger: ACTCCAGGCGGGGGCCTCCCAGTTTGAAACAAGCGC...AAATAGGAAAGCTGGTGTATCCATTGAGGACCCTTTAGGCCTAAGAGCCCAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000404970.3 |
||
| CDS-3UTR CCA 90 bp | GAAGAAAGTTTGGGGGCCCCCTCCCGTGGCAGGTTAAGGGACTGTACCCTCAAAGGGAGAAACCCGAAGTaGCAGAATTATTGGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EESLGAPSRGRLRDCTLKGRNPK*QNYWSI Trigger: GATGGACCAATAATTCTGCCACTTCGGGTTTCTCCC...TTTGAGGGTACAGTCCCTTAACCTGCCACGGGAGGGGGCCCCCAAACTTTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR CCA 90 bp | TCTCAGACTGGGCTCTTAGGCCTAAAGGGTCCTCAATGGATACACCAGCTTTCCACCCATCACCGCTGGTaGATGTCTCAGAGGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQTGLLGLKGPQWIHQLSTHHRW*MSQRKP Trigger: AGGCTTCCTCTGAGACATCCACCAGCGGTGATGGGT...GGAAAGCTGGTGTATCCATTGAGGACCCTTTAGGCCTAAGAGCCCAGTCTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404970.3 |
||
| CDS-3UTR CCA 90 bp | AAACCTAGAATCCACTGGGGAAACCTCTCCAGGGAAAGGGCCCCGGCCATTCTCAAACCTAGAATCCACTaGGGAAACCTCTCCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KPRIHWGNLSRERAPAILKPRIH*GNLSRE Trigger: TTCCCTGGAGAGGTTTCCCCAGTGGATTCTAGGTTT...GAGAATGGCCGGGGCCCTTTCCCTGGAGAGGTTTCCCCAGTGGATTCTAGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000404970.3 ENST00000481878.1 |
||
| CDS-3UTR GCA 90 bp | CTTACATACCAGCTGGGGGAGGGAGAGGAGGGTACAAGAGGTTTGGAAAATGAGGCGCTTGAGCTTGGCTaGGCTTGTTTCAAACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTYQLGEGEEGTRGLENEALELG*ACFKLG Trigger: TCCCAGTTTGAAACAAGCGCAGCCAAGCTCAAGCGC...CTCATTTTCCAAACCTCTTGTACCCTCCTCTCCCTCCCCCAGCTGGTATGTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR GCA 90 bp | ACACACACGGACACACACACACACGGATCCAGGGGAGTGGGGGCTGAAAGATATTTTTCACAATCTGGATaGGCCACAGAATTGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: THTDTHTHGSRGVGAERYFSQSG*ATELGA Trigger: TGCCCCCAATTCTGTGGCGCATCCAGATTGTGAAAA...ATATCTTTCAGCCCCCACTCCCCTGGATCCGTGTGTGTGTGTGTCCGTGTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR CCA 90 bp | GTGAAGGGAACCTCAGGAAGGGGTGTTAAGGACAACCGGAAAAATCATCTAGTAGTTACTGGTGAGGTTTaGAGGGGGTGCAGGGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: VKGTSGRGVKDNRKNHLVVTGEV*RGCRGT Trigger: GGTCCCCCTGCACCCCCTCCAAACCTCACCAGTAAC...TACTAGATGATTTTTCCGGTTGTCCTTAACACCCCTTCCTGAGGTTCCCTTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENST00000316509.11 ENST00000404970.3 |
||
| CDS-3UTR CCA 90 bp | CGCAAGCTCTCAAATAATGGGGTGGTTGGCTTCCTGGTCATGTCTCAAGCCCCTAAAGGAAGGCCAGGGTaGGAGGAAGGATCAGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKLSNNGVVGFLVMSQAPKGRPG*EEGSAK Trigger: TTTAGCTGATCCTTCCTCCCACCCTGGCCTTCCTTT...AGGGGCTTGAGACATGACCAGGAAGCCAACCACCCCATTATTTGAGAGCTTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404970.3 |
||
| CDS-3UTR CCA 90 bp | CTCCCAATGGATACAAAGAAGATGTACCTAAGGAAGCCTGGACAGGTGCTGTTGGGTGGATCAGGCAGATaGGAGGGAAACCCCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPMDTKKMYLRKPGQVLLGGSGR*EGNPMG Trigger: TCCCATGGGGTTTCCCTCCCATCTGCCTGATCCACC...CAACAGCACCTGTCCAGGCTTCCTTAGGTACATCTTCTTTGTATCCATTGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR TCA 90 bp | GACTGGGCTCTTAGGCCTAAAGGGTCCTCAATGGATACACCAGCTTTCCTATTTCCACGTTCACCCTCATaGTGTCCACCACCTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: DWALRPKGSSMDTPAFLFPRSPS*CPPPHP Trigger: TGGATGAGGTGGTGGACATCATGAGGGTGAACGTGG...AAATAGGAAAGCTGGTGTATCCATTGAGGACCCTTTAGGCCTAAGAGCCCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404970.3 |
||
| CDS-3UTR TCA 90 bp | TCTCAGACTGGGCTCTTAGGCCTAAAGGGTCCTCAATGGATACACCAGCTTTCCCATAGCAGATGCAAATaGAGGGACTTGGGGCTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQTGLLGLKGPQWIHQLSHSRCK*RDLGLV Trigger: GACTAGCCCCAAGTCCCTTCATTTGCATCTGCTATG...GGAAAGCTGGTGTATCCATTGAGGACCCTTTAGGCCTAAGAGCCCAGTCTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404970.3 |
||
| CDS-3UTR TCA 90 bp | CACACACTGGTAGCCACCCCTCTCACAAGAGATCAATTGTGGCCAACCCCCAACCATGGGAATGTCAGTTaGGTACCCCACATGAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: HTLVATPLTRDQLWPTPNHGNVS*VPHMKT Trigger: AGTTTTCATGTGGGGTACTCAACTGACATTCCCATG...GTTGGGGGTTGGCCACAATTGATCTCTTGTGAGAGGGGTGGCTACCAGTGTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR TCA 90 bp | TTCTCCCACTCCTCAATTCCAGGGTTCTCAGACTGGGCTCTTAGGCCTAAAGGGCGGGGATTTAAGTGCTaGAGTAAACTGTGGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSHSSIPGFSDWALRPKGRGFKC*SKLWRE Trigger: CTCTCTCCACAGTTTACTTCAGCACTTAAATCCCCG...CCCTTTAGGCCTAAGAGCCCAGTCTGAGAACCCTGGAATTGAGGAGTGGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404970.3 |
||
| CDS-3UTR CCA 90 bp | ACATTTATTGTACATTTTCACAATCTGGATGCGCCACAGAATTGGGGGCATGGGGTTACTGGTGAGGTTTaGAGGGGGTGCAGGGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: TFIVHFHNLDAPQNWGHGVTGEV*RGCRGT Trigger: GGTCCCCCTGCACCCCCTCCAAACCTCACCAGTAAC...CCCATGCCCCCAATTCTGTGGCGCATCCAGATTGTGAAAATGTACAATAAATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR CCA 90 bp | CTCTCACAAGAGATCAATTGTGGCCAACCCCCAACTCTCCTGGTGGGAGGAGGACTCAGAGCCTCCCAATaGATACAAAGAAGATGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LSQEINCGQPPTLLVGGGLRASQ*IQRRCT Trigger: GGTACATCTTCTTTGTATCCATTGGGAGGCTCTGAG...TCCTCCTCCCACCAGGAGAGTTGGGGGTTGGCCACAATTGATCTCTTGTGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR CCA 90 bp | ACATTTATTGTACATTTTCACAATCTGGATGCGCCACAGAATTGGGGGCATGGGAGGAGGAGGCAATGCTaGGGACCAGAGCAGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TFIVHFHNLDAPQNWGHGRRRQC*GPEQPG Trigger: ACCAGGCTGCTCTGGTCCCCAGCATTGCCTCCTCCT...CCCATGCCCCCAATTCTGTGGCGCATCCAGATTGTGAAAATGTACAATAAATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR CCA 90 bp | ACACACACGGACACACACACACACGGATCCAGGGGAGTGGGGGCTGAAAGATATAGGGTACAAGAGGTTTaGAAAATGAGGGTAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: THTDTHTHGSRGVGAERYRVQEV*KMRVRE Trigger: CTCCCTTACCCTCATTTTCCAAACCTCTTGTACCCT...ATATCTTTCAGCCCCCACTCCCCTGGATCCGTGTGTGTGTGTGTCCGTGTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR CCA 90 bp | GTGAAGGGAACCTCAGGAAGGGGTGTTAAGGACAACCGGAAAAATCATCTAGTAAACCCCCAACTCTCCTaGTGGGAGGAGGAGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VKGTSGRGVKDNRKNHLVNPQLS*WEEEVD Trigger: ATCCACCTCCTCCTCCCACCAGGAGAGTTGGGGGTT...TACTAGATGATTTTTCCGGTTGTCCTTAACACCCCTTCCTGAGGTTCCCTTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR CCA 90 bp | GAAGAAAGTTTGGGGGCCCCCTCCCGTGGCAGGTTAAGGGACTGTACCCTCAAATACATTTTCACAATCTaGATGCGCCACAGAATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EESLGAPSRGRLRDCTLKYIFTI*MRHRIG Trigger: CCCAATTCTGTGGCGCATCCAGATTGTGAAAATGTA...TTTGAGGGTACAGTCCCTTAACCTGCCACGGGAGGGGGCCCCCAAACTTTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR CCA 90 bp | ACACACACGGACACACACACACACGGATCCAGGGGAGTGGGGGCTGAAAGATATGCTGACACCCTCTCTTaGACTCAGTTTTTCCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: THTDTHTHGSRGVGAERYADTLS*TQFFHL Trigger: TAGATGGAAAAACTGAGTCCAAGAGAGGGTGTCAGC...ATATCTTTCAGCCCCCACTCCCCTGGATCCGTGTGTGTGTGTGTCCGTGTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| CDS-3UTR TCA 90 bp | GTGAAGGGAACCTCAGGAAGGGGTGTTAAGGACAACCGGAAAAATCATCTAGTACCACGTTCACCCTCATaGTGTCCACCACCTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VKGTSGRGVKDNRKNHLVPRSPS*CPPPHP Trigger: TGGATGAGGTGGTGGACATCATGAGGGTGAACGTGG...TACTAGATGATTTTTCCGGTTGTCCTTAACACCCCTTCCTGAGGTTCCCTTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000316509.11 ENST00000404970.3 |
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| CDS-3UTR TCA 90 bp | AAACCTAGAATCCACTGGGGAAACCTCTCCAGGGAAAGGGCCCCGGCCATTCTCGTTTTTGGCTCTAGATaGATCAGAATTGCCATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPRIHWGNLSRERAPAILVFGSR*IRIAIS Trigger: GCTAATGGCAATTCTGATTCATCTAGAGCCAAAAAC...GAGAATGGCCGGGGCCCTTTCCCTGGAGAGGTTTCCCCAGTGGATTCTAGGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000404970.3 ENST00000481878.1 |
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| CDS-3UTR GCA 90 bp | TTTTTGGCTCTAGATGAATCAGAATTGCCATTAGCAGCTATATGTGTTTTTGGCGGCCCCCGCCTGGAGTaGATCTGCACGGTCGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLALDESELPLAAICVFGGPRLE*ICTVVQ Trigger: CTGGACGACCGTGCAGATGCACTCCAGGCGGGGGCC...GCCAAAAACACATATAGCTGCTAATGGCAATTCTGATTCATCTAGAGCCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000404970.3 ENST00000481878.1 |
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| CDS-3UTR GCA 90 bp | GACTGGGCTCTTAGGCCTAAAGGGTCCTCAATGGATACACCAGCTTTCCTATTTGCGCTTGAGCTTGGCTaGGCTTGTTTCAAACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DWALRPKGSSMDTPAFLFALELG*ACFKLG Trigger: TCCCAGTTTGAAACAAGCGCAGCCAAGCTCAAGCGC...AAATAGGAAAGCTGGTGTATCCATTGAGGACCCTTTAGGCCTAAGAGCCCAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| CDS-3UTR CCA 90 bp | TTTTTGGCTCTAGATGAATCAGAATTGCCATTAGCAGCTATATGTGTTTTTGGCTGGGAGGCCCCCGCCTaGAGTGCATCTGCACGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: FLALDESELPLAAICVFGWEAPA*SASARS Trigger: CGACCGTGCAGATGCACTCCAGGCGGGGGCCTCCCA...GCCAAAAACACATATAGCTGCTAATGGCAATTCTGATTCATCTAGAGCCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000404970.3 ENST00000481878.1 |
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| CDS-3UTR TCA 90 bp | GGAACCTCAGGAAGGGGTGTTAAGGACAACCGGAAAAATCATCTAGTAATAAAAGGCAAGAGAGAGGGGTaGAGGGAACCTCAGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTSGRGVKDNRKNHLVIKGKREG*REPQEG Trigger: CCCTTCCTGAGGTTCCCTTCACCCCTCTCTCTTGCC...TTTTATTACTAGATGATTTTTCCGGTTGTCCTTAACACCCCTTCCTGAGGTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000316509.11 ENST00000404970.3 |
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| CDS-3UTR TCA 90 bp | ACACACACGGACACACACACACACGGATCCAGGGGAGTGGGGGCTGAAAGATATGTTTTTGGCTCTAGATaGATCAGAATTGCCATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: THTDTHTHGSRGVGAERYVFGSR*IRIAIS Trigger: GCTAATGGCAATTCTGATTCATCTAGAGCCAAAAAC...ATATCTTTCAGCCCCCACTCCCCTGGATCCGTGTGTGTGTGTGTCCGTGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| CDS-3UTR CCA 90 bp | TGGCAGGTTAAGGGACTGTACCCTCAAACCCTTAAAATTGTGCCATTTAAAAAGGGCAGTCAGAGGAGCTaGGCAGTGATGGGGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: WQVKGLYPQTLKIVPFKKGSQRS*AVMGQH Trigger: GTGTTGCCCCATCACTGCCCAGCTCCTCTGACTGCC...CTTTTTAAATGGCACAATTTTAAGGGTTTGAGGGTACAGTCCCTTAACCTGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR TCA 90 bp | CGTGGCAGGTTAAGGGACTGTACCCTCAAACCCTTAAAATTGTGCCATTTAAAAGCTGAAAGATATGGCTaGGAGGTGGAGGAACGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGRLRDCTLKPLKLCHLKAERYG*EVEERL Trigger: CAGCCGTTCCTCCACCTCTCAGCCATATCTTTCAGC...TTTTAAATGGCACAATTTTAAGGGTTTGAGGGTACAGTCCCTTAACCTGCCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR GCA 90 bp | TTTTTGGCTCTAGATGAATCAGAATTGCCATTAGCAGCTATATGTGTTTTTGGCCGCCTGGAGTGCATCTaGACGGTCGTCCAGCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: FLALDESELPLAAICVFGRLECI*TVVQLR Trigger: TCGGAGCTGGACGACCGTGCAGATGCACTCCAGGCG...GCCAAAAACACATATAGCTGCTAATGGCAATTCTGATTCATCTAGAGCCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000404970.3 ENST00000481878.1 |
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| CDS-3UTR GCA 90 bp | GTGAAGGGAACCTCAGGAAGGGGTGTTAAGGACAACCGGAAAAATCATCTAGTACAGCTTAGATATCCCTaGTCCCCCTCCACACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VKGTSGRGVKDNRKNHLVQLRYP*SPSTQK Trigger: TTTCTGTGTGGAGGGGGAGCAGGGATATCTAAGCTG...TACTAGATGATTTTTCCGGTTGTCCTTAACACCCCTTCCTGAGGTTCCCTTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR CCA 90 bp | ATACACCAGCTTTCCTATTTCCAAATGTTAACAAGACTGCCAAGAACTAGGCAAACCACCTCATCCACCTaGGCCTGGGTCTGCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IHQLSYFQMLTRLPRTRQTTSST*AWVCCS Trigger: ACTGCAGCAGACCCAGGCCCAGGTGGATGAGGTGGT...TTGCCTAGTTCTTGGCAGTCTTGTTAACATTTGGAAATAGGAAAGCTGGTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| CDS-3UTR CCA 90 bp | CGCAAGCTCTCAAATAATGGGGTGGTTGGCTTCCTGGTCATGTCTCAAGCCCCTTGTATAAATAACAGCTaGCTATTTACAGGGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: RKLSNNGVVGFLVMSQAPCINNS*LFTGGH Trigger: GTGTCCCCCTGTAAATAGCCAGCTGTTATTTATACA...AGGGGCTTGAGACATGACCAGGAAGCCAACCACCCCATTATTTGAGAGCTTGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| CDS-3UTR CCA 90 bp | GGAACCTCAGGAAGGGGTGTTAAGGACAACCGGAAAAATCATCTAGTAATAAAAAGGAGTGGGGGAGATTaGTCCCAACCCATCACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTSGRGVKDNRKNHLVIKRSGGD*SQPITA Trigger: AGCGGTGATGGGTTGGGACCAATCTCCCCCACTCCT...TTTTATTACTAGATGATTTTTCCGGTTGTCCTTAACACCCCTTCCTGAGGTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| CDS-3UTR CCA 90 bp | TTTTTGGCTCTAGATGAATCAGAATTGCCATTAGCAGCTATATGTGTTTTTGGCGCGCTTGTTTCAAACTaGGAGGCCCCCGCCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FLALDESELPLAAICVFGALVSN*EAPAWS Trigger: ACTCCAGGCGGGGGCCTCCCAGTTTGAAACAAGCGC...GCCAAAAACACATATAGCTGCTAATGGCAATTCTGATTCATCTAGAGCCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000404970.3 ENST00000481878.1 |
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| CDS-3UTR CCA 90 bp | AAAAAGACAATAGACCCTTCCTCAATCAGTTCACCCAATGAGAGGACAGCTCTCAAAGGAAGGCCAGGGTaGGAGGAAGGATCAGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KKTIDPSSISSPNERTALKGRPG*EEGSAK Trigger: TTTAGCTGATCCTTCCTCCCACCCTGGCCTTCCTTT...GAGAGCTGTCCTCTCATTGGGTGAACTGATTGAGGAAGGGTCTATTGTCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR CCA 90 bp | CGTGGCAGGTTAAGGGACTGTACCCTCAAACCCTTAAAATTGTGCCATTTAAAAATTCTTAGGACCAAGTaGGGCCAGTCTCAGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGRLRDCTLKPLKLCHLKILRTK*GQSQSL Trigger: GAGGCTCTGAGACTGGCCCCACTTGGTCCTAAGAAT...TTTTAAATGGCACAATTTTAAGGGTTTGAGGGTACAGTCCCTTAACCTGCCACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR CCA 90 bp | TGGCAGGTTAAGGGACTGTACCCTCAAACCCTTAAAATTGTGCCATTTAAAAAGATTTCAGGCAGGAATTaGGGGGATTCTCTGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WQVKGLYPQTLKIVPFKKISGRN*GDSLPC Trigger: GCAGGGCAGAGAATCCCCCCAATTCCTGCCTGAAAT...CTTTTTAAATGGCACAATTTTAAGGGTTTGAGGGTACAGTCCCTTAACCTGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR TCA 90 bp | TGGCAGGTTAAGGGACTGTACCCTCAAACCCTTAAAATTGTGCCATTTAAAAAGCATAGCAGATGCAAATaGAGGGACTTGGGGCTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WQVKGLYPQTLKIVPFKKHSRCK*RDLGLV Trigger: GACTAGCCCCAAGTCCCTTCATTTGCATCTGCTATG...CTTTTTAAATGGCACAATTTTAAGGGTTTGAGGGTACAGTCCCTTAACCTGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR TCA 90 bp | TGGCAGGTTAAGGGACTGTACCCTCAAACCCTTAAAATTGTGCCATTTAAAAAGAATCAGTTCACCCAATaGGAGGACAGCTCTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WQVKGLYPQTLKIVPFKKNQFTQ*EDSSLW Trigger: CCAGAGAGAGCTGTCCTCTCATTGGGTGAACTGATT...CTTTTTAAATGGCACAATTTTAAGGGTTTGAGGGTACAGTCCCTTAACCTGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR CCA 90 bp | TTTTTGGCTCTAGATGAATCAGAATTGCCATTAGCAGCTATATGTGTTTTTGGCCCAGGGTTCTCAGACTaGGCTCTTAGGCCTAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLALDESELPLAAICVFGPGFSD*ALRPKG Trigger: CCCTTTAGGCCTAAGAGCCCAGTCTGAGAACCCTGG...GCCAAAAACACATATAGCTGCTAATGGCAATTCTGATTCATCTAGAGCCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| CDS-3UTR GCA 90 bp | TTTTTGGCTCTAGATGAATCAGAATTGCCATTAGCAGCTATATGTGTTTTTGGCGCGCTTGAGCTTGGCTaGGCTTGTTTCAAACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLALDESELPLAAICVFGALELG*ACFKLG Trigger: TCCCAGTTTGAAACAAGCGCAGCCAAGCTCAAGCGC...GCCAAAAACACATATAGCTGCTAATGGCAATTCTGATTCATCTAGAGCCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000404970.3 ENST00000481878.1 |
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| CDS-3UTR TCA 90 bp | TTTTTGGCTCTAGATGAATCAGAATTGCCATTAGCAGCTATATGTGTTTTTGGCACCAGTATTTGCGCTTaGGCTTGGCTGCGCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLALDESELPLAAICVFGTSICA*AWLRLF Trigger: AAACAAGCGCAGCCAAGCTCAAGCGCAAATACTGGT...GCCAAAAACACATATAGCTGCTAATGGCAATTCTGATTCATCTAGAGCCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000404970.3 ENST00000481878.1 |
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| CDS-3UTR CCA 90 bp | CCATTTAAAAAGACAATAGACCCTTCCTCAATCAGTTCACCCAATGAGAGGACAGTACCTAAGGAAGCCTaGACAGGTGCTGTTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PFKKTIDPSSISSPNERTVPKEA*TGAVVF Trigger: AAAAACAACAGCACCTGTCCAGGCTTCCTTAGGTAC...TGTCCTCTCATTGGGTGAACTGATTGAGGAAGGGTCTATTGTCTTTTTAAATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR CCA 90 bp | GGCCTAAAGGGTCCTCAATGGATACACCAGCTTTCCTATTTCCAAATGTTAACACTAAAGGGTCCTCAATaGATACACCAGCTTTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: GLKGPQWIHQLSYFQMLTLKGPQ*IHQLSY Trigger: ATAGGAAAGCTGGTGTATCCATTGAGGACCCTTTAG...TGTTAACATTTGGAAATAGGAAAGCTGGTGTATCCATTGAGGACCCTTTAGGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| CDS-3UTR GCA 90 bp | TGGCAGGTTAAGGGACTGTACCCTCAAACCCTTAAAATTGTGCCATTTAAAAAGAAGGAGAGGGACTATTaGATAGCAGATGCAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: WQVKGLYPQTLKIVPFKKKERDY*IADANE Trigger: TTCATTTGCATCTGCTATGCAATAGTCCCTCTCCTT...CTTTTTAAATGGCACAATTTTAAGGGTTTGAGGGTACAGTCCCTTAACCTGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR GCA 90 bp | GGAACCTCAGGAAGGGGTGTTAAGGACAACCGGAAAAATCATCTAGTAATAAAAAAGGAGAGGGACTATTaGATAGCAGATGCAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTSGRGVKDNRKNHLVIKKERDY*IADANE Trigger: TTCATTTGCATCTGCTATGCAATAGTCCCTCTCCTT...TTTTATTACTAGATGATTTTTCCGGTTGTCCTTAACACCCCTTCCTGAGGTTCC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000316509.11 ENST00000404970.3 |
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| CDS-3UTR CCA 90 bp | GGAACCTCAGGAAGGGGTGTTAAGGACAACCGGAAAAATCATCTAGTAATAAAATGTATAAATAACAGCTaGCTATTTACAGGGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: GTSGRGVKDNRKNHLVIKCINNS*LFTGGH Trigger: GTGTCCCCCTGTAAATAGCCAGCTGTTATTTATACA...TTTTATTACTAGATGATTTTTCCGGTTGTCCTTAACACCCCTTCCTGAGGTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000316509.11 ENST00000404970.3 |
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| CDS-3UTR CCA 90 bp | AAAAAGACAATAGACCCTTCCTCAATCAGTTCACCCAATGAGAGGACAGCTCTCTGGAACAAAAAGAAATaGAAAGGGATAGCAGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: KKTIDPSSISSPNERTALWNKKK*KGIAVC Trigger: ACATACTGCTATCCCTTTCCATTTCTTTTTGTTCCA...GAGAGCTGTCCTCTCATTGGGTGAACTGATTGAGGAAGGGTCTATTGTCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS GCA 90 bp | GCGCGGGGAACGCAGGAGAGACCCCGGGCACTCCCGACGGCCGGTTaGCAAGGGCGGCGGCCGGCGCAGGGAAGCGCGGTGAGGGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ARGTQERPRALPTAG*QGRRPAQGSAVRVA Trigger: CGCCACCCTCACCGCGCTTCCCTGCGCCGGCCGCCGCCCTTGGCAACCGGCCGTCGGGAGTGCCCGGGGTCTCTCCTGCGTTCCCCGCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488857.5 |
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| CDS CCA 90 bp | CCGGCGCAGGGAAGCGCGGTGAGGGTGGCGGGCGGCCGACTCACATaGCGGGGGCAGCGGGTGGAGGACTTGGCAGCGGCAGTGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PAQGSAVRVAGGRLT*RGQRVEDLAAAVMA Trigger: CGCCATCACTGCCGCTGCCAAGTCCTCCACCCGCTGCCCCCGCCATGTGAGTCGGCCGCCCGCCACCCTCACCGCGCTTCCCTGCGCCGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000488857.5 |
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| CDS CCA 90 bp | CCTCCAGTCCTCCTTTTCGGGAGGAAGGCCACCCGATGTAAGCCCTaGTCTCGGTCCAGCCCTGCCGCCGATGAGCTGCGTGACCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PPVLLFGRKATRCKP*SRSSPAADELRDLE Trigger: CTCAAGGTCACGCAGCTCATCGGCGGCAGGGCTGGACCGAGACCAGGGCTTACATCGGGTGGCCTTCCTCCCGAAAAGGAGGACTGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488857.5 |
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| CDS-3UTR CAA 90 bp | AGGCAAACTGGACTAGAGGGGCTAGGAGGAGGCAATGCTGGGGACCAGAGCAGCTATTTGCGCTTGAGCTaGGCTGCGCTTGTTTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RQTGLEGLGGGNAGDQSSYLRLS*AALVSN Trigger: GTTTGAAACAAGCGCAGCCAAGCTCAAGCGCAAATA...GCTGCTCTGGTCCCCAGCATTGCCTCCTCCTAGCCCCTCTAGTCCAGTTTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR CAA 90 bp | AAAAAGACAATAGACCCTTCCTCAATCAGTTCACCCAATGAGAGGACAGCTCTCCAGCGGGTGGAGGACTaGGCAGCGGCAGTGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KKTIDPSSISSPNERTALQRVED*AAAVMA Trigger: CGCCATCACTGCCGCTGCCAAGTCCTCCACCCGCTG...GAGAGCTGTCCTCTCATTGGGTGAACTGATTGAGGAAGGGTCTATTGTCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR CAA 90 bp | CTCTCACAAGAGATCAATTGTGGCCAACCCCCAACTCTCCTGGTGGGAGGAGGAAGTCCCATACACACATaGGCAGTGACTAGTACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSQEINCGQPPTLLVGGGSPIHT*AVTSTP Trigger: GGGGGTACTAGTCACTGCCAATGTGTGTATGGGACT...TCCTCCTCCCACCAGGAGAGTTGGGGGTTGGCCACAATTGATCTCTTGTGAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR CAA 90 bp | GGGATTCTTAGGACCAAGTGGGGCCAGTCTCAGAGCCTCCCAATGGATACAAAGCACCAGTATTTGCGCTaGAGCTTGGCTGCGCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GILRTKWGQSQSLPMDTKHQYLR*SLAALV Trigger: AACAAGCGCAGCCAAGCTCAAGCGCAAATACTGGTG...CTTTGTATCCATTGGGAGGCTCTGAGACTGGCCCCACTTGGTCCTAAGAATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR CAA 90 bp | GGGATTCTTAGGACCAAGTGGGGCCAGTCTCAGAGCCTCCCAATGGATACAAAGTTTTTCCACCAGTATTaGCGCTTGAGCTTGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GILRTKWGQSQSLPMDTKFFHQY*RLSLAA Trigger: CGCAGCCAAGCTCAAGCGCAAATACTGGTGGAAAAA...CTTTGTATCCATTGGGAGGCTCTGAGACTGGCCCCACTTGGTCCTAAGAATCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316509.11 |
||
| CDS-3UTR CAA 90 bp | TCTCAGACTGGGCTCTTAGGCCTAAAGGGTCCTCAATGGATACACCAGCTTTCCTTTTTCCACCAGTATTaGCGCTTGAGCTTGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SQTGLLGLKGPQWIHQLSFFHQY*RLSLAA Trigger: CGCAGCCAAGCTCAAGCGCAAATACTGGTGGAAAAA...GGAAAGCTGGTGTATCCATTGAGGACCCTTTAGGCCTAAGAGCCCAGTCTGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000404970.3 |
||
| CDS-3UTR CAA 90 bp | TCTCAAATAATGGGGTGGTTGGCTTCCTGGTCATGTCTCAAGCCCCTGGTCCTTCAAATAATGGGGTGGTaGGCTTCCTGGTCATGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SQIMGWLASWSCLKPLVLQIMGW*ASWSCL Trigger: GAGACATGACCAGGAAGCCAACCACCCCATTATTTG...AAGGACCAGGGGCTTGAGACATGACCAGGAAGCCAACCACCCCATTATTTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| CDS-3UTR CAA 90 bp | TTTTTGGCTCTAGATGAATCAGAATTGCCATTAGCAGCTATATGTGTTTTTGGCCAGCGGGTGGAGGACTaGGCAGCGGCAGTGATGGCG | + |
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Preference number: 5 (lower is better) Translates to: FLALDESELPLAAICVFGQRVED*AAAVMA Trigger: CGCCATCACTGCCGCTGCCAAGTCCTCCACCCGCTG...GCCAAAAACACATATAGCTGCTAATGGCAATTCTGATTCATCTAGAGCCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000481878.1 |
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| CDS-3UTR CAA 90 bp | TCTCAGACTGGGCTCTTAGGCCTAAAGGGTCCTCAATGGATACACCAGCTTTCCTATTTGCGCTTGAGCTaGGCTGCGCTTGTTTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: SQTGLLGLKGPQWIHQLSYLRLS*AALVSN Trigger: GTTTGAAACAAGCGCAGCCAAGCTCAAGCGCAAATA...GGAAAGCTGGTGTATCCATTGAGGACCCTTTAGGCCTAAGAGCCCAGTCTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| CDS-3UTR CAA 90 bp | GTGAAGGGAACCTCAGGAAGGGGTGTTAAGGACAACCGGAAAAATCATCTAGTACACCAGTATTTGCGCTaGAGCTTGGCTGCGCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: VKGTSGRGVKDNRKNHLVHQYLR*SLAALV Trigger: AACAAGCGCAGCCAAGCTCAAGCGCAAATACTGGTG...TACTAGATGATTTTTCCGGTTGTCCTTAACACCCCTTCCTGAGGTTCCCTTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000316509.11 ENST00000404970.3 |
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| CDS-3UTR CAA 90 bp | AAACCTAGAATCCACTGGGGAAACCTCTCCAGGGAAAGGGCCCCGGCCATTCTCCTAGATGAATCAGAATaGCCATTAGCAGCTATATGT | + |
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Preference number: 5 (lower is better) Translates to: KPRIHWGNLSRERAPAILLDESE*PLAAIC Trigger: ACATATAGCTGCTAATGGCAATTCTGATTCATCTAG...GAGAATGGCCGGGGCCCTTTCCCTGGAGAGGTTTCCCCAGTGGATTCTAGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000404970.3 ENST00000481878.1 |
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| CDS-3UTR CAA 90 bp | GTGAAGGGAACCTCAGGAAGGGGTGTTAAGGACAACCGGAAAAATCATCTAGTACTCCATGGTATGGCCTaGAAGCCACAGACCCTAATC | + |
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Preference number: 5 (lower is better) Translates to: VKGTSGRGVKDNRKNHLVLHGMA*KPQTLI Trigger: GATTAGGGTCTGTGGCTTCAAGGCCATACCATGGAG...TACTAGATGATTTTTCCGGTTGTCCTTAACACCCCTTCCTGAGGTTCCCTTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| CDS-3UTR CAA 90 bp | AAAAAGACAATAGACCCTTCCTCAATCAGTTCACCCAATGAGAGGACAGCTCTCGAGGGTACAAGAGGTTaGGAAAATGAGGGTAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: KKTIDPSSISSPNERTALEGTRG*ENEGKG Trigger: TCCCTTACCCTCATTTTCCAAACCTCTTGTACCCTC...GAGAGCTGTCCTCTCATTGGGTGAACTGATTGAGGAAGGGTCTATTGTCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR CAA 90 bp | GGAACCTCAGGAAGGGGTGTTAAGGACAACCGGAAAAATCATCTAGTAATAAAAACGCTCCCAAAGACCTaGGGATTCTTAGGACCAAGT | + |
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Preference number: 5 (lower is better) Translates to: GTSGRGVKDNRKNHLVIKTLPKT*GFLGPS Trigger: ACTTGGTCCTAAGAATCCCAAGGTCTTTGGGAGCGT...TTTTATTACTAGATGATTTTTCCGGTTGTCCTTAACACCCCTTCCTGAGGTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000316509.11 |
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| CDS-3UTR CAA 90 bp | TTTTTGGCTCTAGATGAATCAGAATTGCCATTAGCAGCTATATGTGTTTTTGGCCACCAGTATTTGCGCTaGAGCTTGGCTGCGCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: FLALDESELPLAAICVFGHQYLR*SLAALV Trigger: AACAAGCGCAGCCAAGCTCAAGCGCAAATACTGGTG...GCCAAAAACACATATAGCTGCTAATGGCAATTCTGATTCATCTAGAGCCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000404970.3 ENST00000481878.1 |
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| CDS-3UTR CAA 90 bp | TTTTTGGCTCTAGATGAATCAGAATTGCCATTAGCAGCTATATGTGTTTTTGGCTTTTTCCACCAGTATTaGCGCTTGAGCTTGGCTGCG | + |
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Preference number: 5 (lower is better) Translates to: FLALDESELPLAAICVFGFFHQY*RLSLAA Trigger: CGCAGCCAAGCTCAAGCGCAAATACTGGTGGAAAAA...GCCAAAAACACATATAGCTGCTAATGGCAATTCTGATTCATCTAGAGCCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000404970.3 ENST00000481878.1 |
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| CDS-3UTR CAA 90 bp | TTTTTGGCTCTAGATGAATCAGAATTGCCATTAGCAGCTATATGTGTTTTTGGCTATTTGCGCTTGAGCTaGGCTGCGCTTGTTTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: FLALDESELPLAAICVFGYLRLS*AALVSN Trigger: GTTTGAAACAAGCGCAGCCAAGCTCAAGCGCAAATA...GCCAAAAACACATATAGCTGCTAATGGCAATTCTGATTCATCTAGAGCCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000404970.3 ENST00000481878.1 |
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| CDS-3UTR CAA 90 bp | GGAACCTCAGGAAGGGGTGTTAAGGACAACCGGAAAAATCATCTAGTAATAAAACTAGATGAATCAGAATaGCCATTAGCAGCTATATGT | + |
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Preference number: 5 (lower is better) Translates to: GTSGRGVKDNRKNHLVIKLDESE*PLAAIC Trigger: ACATATAGCTGCTAATGGCAATTCTGATTCATCTAG...TTTTATTACTAGATGATTTTTCCGGTTGTCCTTAACACCCCTTCCTGAGGTTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000404970.3 |
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| CDS CAA 90 bp | GGCGCGGGGAACGCAGGAGAGACCCCGGGCACTCCCGACGGCCGGTaGCCAAGGGCGGCGGCCGGCGCAGGGAAGCGCGGTGAGGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GAGNAGETPGTPDGR*PRAAAGAGKRGEGG Trigger: GCCACCCTCACCGCGCTTCCCTGCGCCGGCCGCCGCCCTTGGCAACCGGCCGTCGGGAGTGCCCGGGGTCTCTCCTGCGTTCCCCGCGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488857.5 |
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| CDS TCA 72 bp | GTTGCCAAGGGCGGCGGCCGGCGCAGGGAAGCGCGGTaGGGGTGGCGGGCGGCCGACTCACATGGCGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: VAKGGGRRREAR*GWRAADSHGGG Trigger: GCCCCCGCCATGTGAGTCGGCCGCCCGCCACCCTCACCGCGCTTCCCTGCGCCGGCCGCCGCCCTTGGCAAC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000488857.5 |
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| CDS GCA 72 bp | ACGCAGGAGAGACCCCGGGCACTCCCGACGGCCGGTTaGCAAGGGCGGCGGCCGGCGCAGGGAAGCGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: TQERPRALPTAG*QGRRPAQGSAV Trigger: CACCGCGCTTCCCTGCGCCGGCCGCCGCCCTTGGCAACCGGCCGTCGGGAGTGCCCGGGGTCTCTCCTGCGT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488857.5 |
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| CDS CAA 72 bp | AACGCAGGAGAGACCCCGGGCACTCCCGACGGCCGGTaGCCAAGGGCGGCGGCCGGCGCAGGGAAGCGCGGT | + |
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Preference number: 6 (lower is better) Translates to: NAGETPGTPDGR*PRAAAGAGKRG Trigger: ACCGCGCTTCCCTGCGCCGGCCGCCGCCCTTGGCAACCGGCCGTCGGGAGTGCCCGGGGTCTCTCCTGCGTT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488857.5 |
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| CDS CCA 72 bp | GGAAGCGCGGTGAGGGTGGCGGGCGGCCGACTCACATaGCGGGGGCAGCGGGTGGAGGACTTGGCAGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: GSAVRVAGGRLT*RGQRVEDLAAA Trigger: TGCCGCTGCCAAGTCCTCCACCCGCTGCCCCCGCCATGTGAGTCGGCCGCCCGCCACCCTCACCGCGCTTCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000488857.5 |
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| CDS CCA 72 bp | CTCCTTTTCGGGAGGAAGGCCACCCGATGTAAGCCCTaGTCTCGGTCCAGCCCTGCCGCCGATGAGCTGCGT | + |
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Preference number: 6 (lower is better) Translates to: LLFGRKATRCKP*SRSSPAADELR Trigger: ACGCAGCTCATCGGCGGCAGGGCTGGACCGAGACCAGGGCTTACATCGGGTGGCCTTCCTCCCGAAAAGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488857.5 |
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