RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VAMP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000139190

Ensembl transcript IDs: ENST00000361716.8, ENST00000396308.4, ENST00000400911.7, ENST00000535180.5, ENST00000535927.5, ENST00000538970.5, ENST00000539047.1, ENST00000544432.5

Found 371 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCAAAGAAATCCCTTGTCTCTGCCCTTCCCCCGTCCCGAACCAGGTaGCGATCCCATAGCAGCGGTCTCCATACCTCAGTCAGAGCAGCC +
Preference number: 1 (lower is better)
Translates to: SKKSLVSALPPSRTR*RSHSSGLHTSVRAA
Trigger: GGCTGCTCTGACTGAGGTATGGAGACCGCTGCTATGGGATCGTCACCTGGTTCGGGACGGGGGAAGGGCAGAGACAAGGGATTTCTTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR GCA 90 bp GCCCCACTTCCTCAGAACAGGAGGCGCCATCTCCCTGCAATGCGTTaGAGGGGGAAGGCTTGTCCATCAAAGAAATCCCTTGTCTCTGCC +
Preference number: 1 (lower is better)
Translates to: APLPQNRRRHLPAMR*RGKACPSKKSLVSA
Trigger: GGCAGAGACAAGGGATTTCTTTGATGGACAAGCCTTCCCCCTGCAACGCATTGCAGGGAGATGGCGCCTCCTGTTCTGAGGAAGTGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR TCA 90 bp TACTACAGGAAGAACAGAGAGGCGGCTCTCAAGGAGAGGGCCCCATaGCAGCACAGCAATACACAAGCACACCTGACACAGGCTGGCACG +
Preference number: 1 (lower is better)
Translates to: YYRKNREAALKERAP*QHSNTQAHLTQAGT
Trigger: CGTGCCAGCCTGTGTCAGGTGTGCTTGTGTATTGCTGTGCTGTCATGGGGCCCTCTCCTTGAGAGCCGCCTCTCTGTTCTTCCTGTAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR GCA 90 bp TTGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCAGACCCTaGCCAGCATGGCCTCAGCCTCTTCCTGTTCGTGGACCGAGGGAA +
Preference number: 1 (lower is better)
Translates to: LSNEMLLHGKWASRP*PAWPQPLPVRGPRE
Trigger: TTCCCTCGGTCCACGAACAGGAAGAGGCTGAGGCCATGCTGGGCAGGGTCTGGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR CCA 90 bp GGAATGGGTGATGGAGAAGCCTGGGCTGGAATGGAGGACGGTGGGTaGGGAAGTGTGTTGAGAGAGCAAACAGAGGGCAGAGGACATGAA +
Preference number: 1 (lower is better)
Translates to: GMGDGEAWAGMEDGG*GSVLREQTEGRGHE
Trigger: TTCATGTCCTCTGCCCTCTGTTTGCTCTCTCAACACACTTCCCCACCCACCGTCCTCCATTCCAGCCCAGGCTTCTCCATCACCCATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR CCA 90 bp GAAATGCTGCTGCATGGAAAGTGGGCATCCAGACCCTGCCCAGCATaGCCTCAGCCTCTTCCTGTTCGTGGACCGAGGGAAGAAGGAATA +
Preference number: 1 (lower is better)
Translates to: EMLLHGKWASRPCPA*PQPLPVRGPREEGI
Trigger: TATTCCTTCTTCCCTCGGTCCACGAACAGGAAGAGGCTGAGGCCATGCTGGGCAGGGTCTGGATGCCCACTTTCCATGCAGCAGCATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR CCA 90 bp TGGGAGGGTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTaGGCAGGACGAAGGGAATGTGGGAAACAAGGGCGAAAGGAAAGG +
Preference number: 1 (lower is better)
Translates to: WEGTDCFLPALQSRP*AGRRECGKQGRKER
Trigger: CCTTTCCTTTCGCCCTTGTTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTACCCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
3UTR CCA 90 bp GTGTTGAGGGACAGAGTGCAAATGAACGCAACGAAAAAGGAGGAATaGGTGATGGAGAAGCCTGGGCTGGAATGGAGGACGGTGGGTGGG +
Preference number: 1 (lower is better)
Translates to: VLRDRVQMNATKKEE*VMEKPGLEWRTVGG
Trigger: CCCACCCACCGTCCTCCATTCCAGCCCAGGCTTCTCCATCACCCATTCCTCCTTTTTCGTTGCGTTCATTTGCACTCTGTCCCTCAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR CCA 90 bp CCTGTCTTTGGCAAGTGCACGGGTGGTGTGGAGGAAAGGATTCCATaGGTGTCCAAAGATCTCACACTGCTAACACCCTCACGCTCCTTC +
Preference number: 1 (lower is better)
Translates to: PVFGKCTGGVEERIP*VSKDLTLLTPSRSF
Trigger: GAAGGAGCGTGAGGGTGTTAGCAGTGTGAGATCTTTGGACACCCATGGAATCCTTTCCTCCACACCACCCGTGCACTTGCCAAAGACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR TCA 90 bp TGTGGGAAACAAGGGCGAAAGGAAAGGAAGGATGGTTTTGAGCAATaGAATGCTGCTGCATGGAAAGTGGGCATCCAGACCCTGCCCAGC +
Preference number: 1 (lower is better)
Translates to: CGKQGRKERKDGFEQ*NAAAWKVGIQTLPS
Trigger: GCTGGGCAGGGTCTGGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAACCATCCTTCCTTTCCTTTCGCCCTTGTTTCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
3UTR GCA 90 bp GAATTACACCAAGTTACCAGACATTCAGGTCTCTCCATTGTTAAGTaGCCCATCCCCATGGTCTCCCTCCAACCCAAGCCAGTGACACAC +
Preference number: 1 (lower is better)
Translates to: ELHQVTRHSGLSIVK*PIPMVSLQPKPVTH
Trigger: GTGTGTCACTGGCTTGGGTTGGAGGGAGACCATGGGGATGGGGCACTTAACAATGGAGAGACCTGAATGTCTGGTAACTTGGTGTAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR GCA 90 bp GTGGGAAGCTCAGCTTCATTTGACTGCAAAGTCCCAGGGTTTTGTTaGACATTTGCTCATGCACATGGGTGGTGGGAGGAAAGGGGGATA +
Preference number: 1 (lower is better)
Translates to: VGSSASFDCKVPGFC*TFAHAHGWWEERGI
Trigger: TATCCCCCTTTCCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGCAGTCAAATGAAGCTGAGCTTCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR GCA 90 bp TGGCAAACCGAAGAACGGGATGTGGGAAGCTCAGCTTCATTTGACTaGAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGG +
Preference number: 1 (lower is better)
Translates to: WQTEERDVGSSASFD*KVPGFCCTFAHAHG
Trigger: CCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGCAGTCAAATGAAGCTGAGCTTCCCACATCCCGTTCTTCGGTTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR CCA 90 bp AGTGGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTaGGAAGCTCAGCTTCATTTGACTGCAAAGTCCCAGGGTTTTGTT +
Preference number: 1 (lower is better)
Translates to: SGNPTSSHGKPKNGM*EAQLHLTAKSQGFV
Trigger: AACAAAACCCTGGGACTTTGCAGTCAAATGAAGCTGAGCTTCCCACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR CCA 90 bp AAAGAGGTGATGACAGACACACAGTGGAAACCCCACATCGTCTCATaGCAAACCGAAGAACGGGATGTGGGAAGCTCAGCTTCATTTGAC +
Preference number: 1 (lower is better)
Translates to: KEVMTDTQWKPHIVS*QTEERDVGSSASFD
Trigger: GTCAAATGAAGCTGAGCTTCCCACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTCTGTCATCACCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR TCA 90 bp AAGGGAATGTGGGAAACAAGGGCGAAAGGAAAGGAAGGATGGTTTTaGGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCAGACCCT +
Preference number: 1 (lower is better)
Translates to: KGMWETRAKGKEGWF*AMKCCCMESGHPDP
Trigger: AGGGTCTGGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAACCATCCTTCCTTTCCTTTCGCCCTTGTTTCCCACATTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
3UTR TCA 90 bp AGAGGAACAGGACCCTCTTTAACGAGGGCAAGGAGTGGCTTCCTCTaGGCTTGTTACTTTCAAATTAAGCACTTGACTCACTGTTTCTCT +
Preference number: 1 (lower is better)
Translates to: RGTGPSLTRARSGFL*ACYFQIKHLTHCFS
Trigger: AGAGAAACAGTGAGTCAAGTGCTTAATTTGAAAGTAACAAGCTCAGAGGAAGCCACTCCTTGCCCTCGTTAAAGAGGGTCCTGTTCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR TCA 90 bp GAACAGGAGGCGCCATCTCCCTGCAATGCGTTGCAGGGGGAAGGCTTGTCCATCCCGTCCCGAACCAGGTaGCGATCCCATAGCAGCGGT +
Preference number: 2 (lower is better)
Translates to: EQEAPSPCNALQGEGLSIPSRTR*RSHSSG
Trigger: ACCGCTGCTATGGGATCGTCACCTGGTTCGGGACGG...GATGGACAAGCCTTCCCCCTGCAACGCATTGCAGGGAGATGGCGCCTCCTGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR-3UTR TCA 90 bp GCCGTTGGGAGGGTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGGCCCCGAAGATAGGCTaGGCAGATCCCATCCTCAGG +
Preference number: 2 (lower is better)
Translates to: AVGRVLTAFFQLFSPALGAPKIG*ADPILR
Trigger: CCTGAGGATGGGATCTGCTCAGCCTATCTTCGGGGC...CCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTACCCTCCCAACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR CAA 90 bp GAACAGGAGGCGCCATCTCCCTGCAATGCGTTGCAGGGGGAAGGCTaGTCCATCAAAGAAATCCCTTGTCTCTGCCCTTCCCCCGTCCCG +
Preference number: 2 (lower is better)
Translates to: EQEAPSPCNALQGEG*SIKEIPCLCPSPVP
Trigger: CGGGACGGGGGAAGGGCAGAGACAAGGGATTTCTTTGATGGACAAGCCTTCCCCCTGCAACGCATTGCAGGGAGATGGCGCCTCCTGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR CAA 90 bp ACTTCTCTGCATCCTGAGGATCGGCCGGGCCCCAGGAAGAACCACTaGCCTCATCCCTGTCTTTGGCAAGTGCACGGGTGGTGTGGAGGA +
Preference number: 2 (lower is better)
Translates to: TSLHPEDRPGPRKNH*PHPCLWQVHGWCGG
Trigger: TCCTCCACACCACCCGTGCACTTGCCAAAGACAGGGATGAGGCAAGTGGTTCTTCCTGGGGCCCGGCCGATCCTCAGGATGCAGAGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR CCA 90 bp CCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAACAAGGGCGAAAGGAAAGGATGGAGAAGCCTGGGCTaGAATGGAGGACGGTGGGTG +
Preference number: 2 (lower is better)
Translates to: PALGQDEGNVGNKGERKGWRSLG*NGGRWV
Trigger: CACCCACCGTCCTCCATTCCAGCCCAGGCTTCTCCA...TCCTTTCCTTTCGCCCTTGTTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR GCA 90 bp GCCGTTGGGAGGGTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCCTGTCTTTGGCAAGTaGACGGGTGGTGTGGAGGAA +
Preference number: 2 (lower is better)
Translates to: AVGRVLTAFFQLFSPALGPVFGK*TGGVEE
Trigger: TTCCTCCACACCACCCGTGCACTTGCCAAAGACAGG...CCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTACCCTCCCAACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR TCA 90 bp TGGGAGAGCCAAGAGGACGGATTCGCTCCAGGCTTGGGACACATCGAGGACAGTAAAAGGAGGAATGGGTaGTGGAGAAGCCTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: WESQEDGFAPGLGHIEDSKRRNG*WRSLGW
Trigger: CCAGCCCAGGCTTCTCCATCACCCATTCCTCCTTTT...ACTGTCCTCGATGTGTCCCAAGCCTGGAGCGAATCCGTCCTCTTGGCTCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR GCA 90 bp CAGACACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGCCAGCGGTGACCCCCTaGATTAGGCAAGGAGGAGCC +
Preference number: 2 (lower is better)
Translates to: QTHSGNPTSSHGKPKNGMPAVTP*IRQGGA
Trigger: GGCTCCTCCTTGCCTAATGCAGGGGGTCACCGCTGG...CATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR-3UTR CCA 90 bp TGGGTCTACATGACTTCTCTGCATCCTGAGGATCGGCCGGGCCCCAGGAAGAACAGTGCACGGGTGGTGTaGAGGAAAGGATTCCATGGG +
Preference number: 2 (lower is better)
Translates to: WVYMTSLHPEDRPGPRKNSARVV*RKGFHG
Trigger: CCCATGGAATCCTTTCCTCCACACCACCCGTGCACT...GTTCTTCCTGGGGCCCGGCCGATCCTCAGGATGCAGAGAAGTCATGTAGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR CAA 90 bp AGCCCCACTTCCTCAGAACAGGAGGCGCCATCTCCCTGCAATGCGTaGCAGGGGGAAGGCTTGTCCATCAAAGAAATCCCTTGTCTCTGC +
Preference number: 2 (lower is better)
Translates to: SPTSSEQEAPSPCNA*QGEGLSIKEIPCLC
Trigger: GCAGAGACAAGGGATTTCTTTGATGGACAAGCCTTCCCCCTGCAACGCATTGCAGGGAGATGGCGCCTCCTGTTCTGAGGAAGTGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR-3UTR TCA 90 bp AGGGGGATAGCAGAGACACACAGAAGAGGGTACAGGGTGGGTGAGAAAGAAAGTGCCCCGAAGATAGGCTaGGCAGATCCCATCCTCAGG +
Preference number: 2 (lower is better)
Translates to: RGIAETHRRGYRVGEKESAPKIG*ADPILR
Trigger: CCTGAGGATGGGATCTGCTCAGCCTATCTTCGGGGC...ACTTTCTTTCTCACCCACCCTGTACCCTCTTCTGTGTGTCTCTGCTATCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR CCA 90 bp GACACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGGATTCGCTCCAGGCTTaGGACACATCGAGGACAGTG +
Preference number: 2 (lower is better)
Translates to: DTQWKPHIVSWQTEERDVDSLQA*DTSRTV
Trigger: CACTGTCCTCGATGTGTCCCAAGCCTGGAGCGAATC...CACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR-3UTR GCA 90 bp GTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGAGGAAAGGCTCTCCATTGTTAAGTaGCCCATCCCCATGGTCTCC +
Preference number: 2 (lower is better)
Translates to: VPGFCCTFAHAHGWWEERLSIVK*PIPMVS
Trigger: GGAGACCATGGGGATGGGGCACTTAACAATGGAGAG...CCTTTCCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR-3UTR CCA 90 bp GACTGCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGATGGAGGACGGTGGGTaGGGAAGTGTGTTGAGAGAG +
Preference number: 2 (lower is better)
Translates to: DCKVPGFCCTFAHAHGWWMEDGG*GSVLRE
Trigger: CTCTCTCAACACACTTCCCCACCCACCGTCCTCCAT...CCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR CCA 90 bp CAGGAAAGGGTGGTTCAAAGGGGAATATACTACAGGAAGAACAGAGAGGCGGCTGTCTGGGCAGCTTCATaGGTACTTCGCCTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: QERVVQRGIYYRKNREAAVWAAS*VLRLSH
Trigger: GTGGCTGAGGCGAAGTACCCATGAAGCTGCCCAGAC...AGCCGCCTCTCTGTTCTTCCTGTAGTATATTCCCCTTTGAACCACCCTTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR TCA 90 bp TTGACTGCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGTTCTTCTCCAGCGGTaGCCCCCTGCATTAGGCAAG +
Preference number: 2 (lower is better)
Translates to: LTAKSQGFVAHLLMHMGGVLLQR*PPALGK
Trigger: CTTGCCTAATGCAGGGGGTCACCGCTGGAGAAGAAC...ACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGCAGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR-3UTR CCA 90 bp TTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGAGGAAAGGGGGATAGCACATCGAGGACAGTGGTaGTTCTTCTCCAGCGGTGAC +
Preference number: 2 (lower is better)
Translates to: FCCTFAHAHGWWEERGIAHRGQW*FFSSGD
Trigger: GTCACCGCTGGAGAAGAACCACCACTGTCCTCGATG...TGCTATCCCCCTTTCCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR-3UTR CCA 90 bp GAACGGGATGTGGGAAGCTCAGCTTCATTTGACTGCAAAGTCCCAGGGTTTTGTCATGCACATGGGTGGTaGGAGGAAAGGGGGATAGCA +
Preference number: 2 (lower is better)
Translates to: ERDVGSSASFDCKVPGFCHAHGW*EERGIA
Trigger: TGCTATCCCCCTTTCCTCCCACCACCCATGTGCATG...ACAAAACCCTGGGACTTTGCAGTCAAATGAAGCTGAGCTTCCCACATCCCGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR-3UTR GCA 90 bp TTCCAGCTAGAAGCACATGGGACTGCTTCTAGGATGGAAACAAGTCCTGCTATTGAAATCCCTTGTCTCTaGCCTTCCCCCGTCCCGAAC +
Preference number: 2 (lower is better)
Translates to: FQLEAHGTASRMETSPAIEIPCL*PSPVPN
Trigger: GTTCGGGACGGGGGAAGGGCAGAGACAAGGGATTTC...AATAGCAGGACTTGTTTCCATCCTAGAAGCAGTCCCATGTGCTTCTAGCTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR CAA 90 bp GAAGGGAATGTGGGAAACAAGGGCGAAAGGAAAGGAAGGATGGTTTaGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCAGACCC +
Preference number: 2 (lower is better)
Translates to: EGNVGNKGERKGRMV*SNEMLLHGKWASRP
Trigger: GGGTCTGGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAACCATCCTTCCTTTCCTTTCGCCCTTGTTTCCCACATTCCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
3UTR-3UTR GCA 90 bp AAGAACCACTTGCCTCATCCCTGTCTTTGGCAAGTGCACGGGTGGTGTGGAGGATTTCGAAAAGGGTACTaGACTGAAACCAAGTTGGAC +
Preference number: 2 (lower is better)
Translates to: KNHLPHPCLWQVHGWCGGFRKGY*TETKLD
Trigger: GTCCAACTTGGTTTCAGTGCAGTACCCTTTTCGAAA...TCCTCCACACCACCCGTGCACTTGCCAAAGACAGGGATGAGGCAAGTGGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR CAA 90 bp TCTCATGGCAAACCGAAGAACGGGATGTGGGAAGCTCAGCTTCATTaGACTGCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCAC +
Preference number: 2 (lower is better)
Translates to: SHGKPKNGMWEAQLH*TAKSQGFVAHLLMH
Trigger: GTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGCAGTCAAATGAAGCTGAGCTTCCCACATCCCGTTCTTCGGTTTGCCATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR-3UTR GCA 90 bp GAACGGGATGTGGGAAGCTCAGCTTCATTTGACTGCAAAGTCCCAGGGTTTTGTGCAATGAAATGCTGCTaGATGGAAAGTGGGCATCCA +
Preference number: 2 (lower is better)
Translates to: ERDVGSSASFDCKVPGFCAMKCC*MESGHP
Trigger: TGGATGCCCACTTTCCATGCAGCAGCATTTCATTGC...ACAAAACCCTGGGACTTTGCAGTCAAATGAAGCTGAGCTTCCCACATCCCGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR GCA 90 bp TTCAGAATACATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGTACAACGAGGCGCCATCTCCCTaGAATGCGTTGCAGGGGGAA +
Preference number: 2 (lower is better)
Translates to: FRIHDIGKYATCLWWKYNEAPSP*NALQGE
Trigger: TTCCCCCTGCAACGCATTGCAGGGAGATGGCGCCTC...GTTGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTATTCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR-3UTR CCA 90 bp GCCTTTGGTGGAAGTACAACTGTTGTTATTACTCTATACAAGTATGAGATCAGGAGTGCCCCATCCCCATaGTCTCCCTCCAACCCAAGC +
Preference number: 2 (lower is better)
Translates to: AFGGSTTVVITLYKYEIRSAPSP*SPSNPS
Trigger: GCTTGGGTTGGAGGGAGACCATGGGGATGGGGCACT...CCTGATCTCATACTTGTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR-3UTR CCA 90 bp GACTGCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGCTAGATGGATTTATTTaGTGCCCTCATACAGAATGC +
Preference number: 2 (lower is better)
Translates to: DCKVPGFCCTFAHAHGWWLDGFI*CPHTEC
Trigger: GCATTCTGTATGAGGGCACCAAATAAATCCATCTAG...CCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR GCA 90 bp ATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGTACAACTGTTGTTATTCTCCCTGCAATGCGTTaGAGGGGGAAGGCTTGTCCA +
Preference number: 2 (lower is better)
Translates to: MTLVNMPHAFGGSTTVVILPAMR*RGKACP
Trigger: TGGACAAGCCTTCCCCCTGCAACGCATTGCAGGGAG...AATAACAACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR-3UTR CCA 90 bp GAAAGTAGAAGGGCTAATACCCCCAAAGAACAAGGCCAACTACACCTGGTGAGCAGACACGGAAAATCCTaGACGAACAGATTAGAAATA +
Preference number: 2 (lower is better)
Translates to: ESRRANTPKEQGQLHLVSRHGKS*TNRLEI
Trigger: TATTTCTAATCTGTTCGTCCAGGATTTTCCGTGTCT...GCTCACCAGGTGTAGTTGGCCTTGTTCTTTGGGGGTATTAGCCCTTCTACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR CCA 90 bp ACTCACTGTTTCTCTATAACTAACAGGCAATCTCTCTCTTTATGCCAACAATTAAACCAAGTTGGACTTTaGTCCACCCCCAGGACCCTC +
Preference number: 2 (lower is better)
Translates to: THCFSITNRQSLSLCQQLNQVGL*STPRTL
Trigger: GAGGGTCCTGGGGGTGGACCAAAGTCCAACTTGGTT...TAATTGTTGGCATAAAGAGAGAGATTGCCTGTTAGTTATAGAGAAACAGTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR TCA 90 bp CCTTTGTTCAGAATACATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGAAGGAAGGATGGTTTTaGGCAATGAAATGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: PLFRIHDIGKYATCLWWKKEGWF*AMKCCC
Trigger: GCAGCAGCATTTCATTGCTCAAAACCATCCTTCCTT...CTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTATTCTGAACAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR TCA 90 bp GAATACATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGTACAACTGTTGAGAAAACAAGAGGGTaGATTACACCAAGTTACCAG +
Preference number: 2 (lower is better)
Translates to: EYMTLVNMPHAFGGSTTVEKTRG*ITPSYQ
Trigger: CTGGTAACTTGGTGTAATTCACCCTCTTGTTTTCTC...AACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR-3UTR GCA 90 bp TACATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGTACAACTGTTGTTCAATCTCTCTCTTTATaGCAACAATTAACTGGGAGC +
Preference number: 2 (lower is better)
Translates to: YMTLVNMPHAFGGSTTVVQSLSL*QQLTGS
Trigger: GCTCCCAGTTAATTGTTGGCATAAAGAGAGAGATTG...AACAACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR GCA 90 bp TACATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGTACAACTGTTGTTTGCCCTCATACAGAATaGTGTAGAAAATGTAAAGAA +
Preference number: 2 (lower is better)
Translates to: YMTLVNMPHAFGGSTTVVCPHTE*CRKCKE
Trigger: TTCTTTACATTTTCTACAGCATTCTGTATGAGGGCA...AACAACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR GCA 90 bp ACTCACTGTTTCTCTATAACTAACAGGCAATCTCTCTCTTTATGCCAACAATTAGATGGATTTATTTGGTaGCCTCATACAGAATGCTGT +
Preference number: 2 (lower is better)
Translates to: THCFSITNRQSLSLCQQLDGFIW*PHTECC
Trigger: ACAGCATTCTGTATGAGGGCACCAAATAAATCCATC...TAATTGTTGGCATAAAGAGAGAGATTGCCTGTTAGTTATAGAGAAACAGTGAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR CCA 90 bp ACTCACTGTTTCTCTATAACTAACAGGCAATCTCTCTCTTTATGCCAACAATTAAAACTACCAGCTAGATaGATTTATTTGGTGCCCTCA +
Preference number: 2 (lower is better)
Translates to: THCFSITNRQSLSLCQQLKLPAR*IYLVPS
Trigger: TGAGGGCACCAAATAAATCCATCTAGCTGGTAGTTT...TAATTGTTGGCATAAAGAGAGAGATTGCCTGTTAGTTATAGAGAAACAGTGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR TCA 72 bp GTGGGGCTGGTGGGTCTACATGACTTCTCTGCATCCTaGGGATCGGCCGGGCCCCAGGAAGAACCACTTGCC +
Preference number: 3 (lower is better)
Translates to: VGLVGLHDFSAS*GSAGPQEEPLA
Trigger: GGCAAGTGGTTCTTCCTGGGGCCCGGCCGATCCTCAGGATGCAGAGAAGTCATGTAGACCCACCAGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR CAA 90 bp CCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAACAAGGGCGAAAGGAAAGGATCCCTGCCCCTTCCCTaGGCCTCCAACTCTTTGGGG +
Preference number: 3 (lower is better)
Translates to: PALGQDEGNVGNKGERKGSLPLP*ASNSLG
Trigger: CCCCAAAGAGTTGGAGGCCAAGGGAAGGGGCAGGGA...TCCTTTCCTTTCGCCCTTGTTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR TCA 72 bp TCCCTTGTCTCTGCCCTTCCCCCGTCCCGAACCAGGTaGCGATCCCATAGCAGCGGTCTCCATACCTCAGTC +
Preference number: 3 (lower is better)
Translates to: SLVSALPPSRTR*RSHSSGLHTSV
Trigger: GACTGAGGTATGGAGACCGCTGCTATGGGATCGTCACCTGGTTCGGGACGGGGGAAGGGCAGAGACAAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR CCA 72 bp CTGCATGGAAAGTGGGCATCCAGACCCTGCCCAGCATaGCCTCAGCCTCTTCCTGTTCGTGGACCGAGGGAA +
Preference number: 3 (lower is better)
Translates to: LHGKWASRPCPA*PQPLPVRGPRE
Trigger: TTCCCTCGGTCCACGAACAGGAAGAGGCTGAGGCCATGCTGGGCAGGGTCTGGATGCCCACTTTCCATGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR CCA 72 bp GCTGGGAGAGCCAAGAGGACGGATTCGCTCCAGGCTTaGGACACATCGAGGACAGTGGTGGTTCTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: AGRAKRTDSLQA*DTSRTVVVLLQ
Trigger: CTGGAGAAGAACCACCACTGTCCTCGATGTGTCCCAAGCCTGGAGCGAATCCGTCCTCTTGGCTCTCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR-3UTR CAA 90 bp TTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAACAAGGGCGAAAGGTTGGCCTCCAACTCTTaGGGGCTTTGGGGGAACTTG +
Preference number: 3 (lower is better)
Translates to: FSPALGQDEGNVGNKGERLASNS*GLWGNL
Trigger: CAAGTTCCCCCAAAGCCCCAAAGAGTTGGAGGCCAA...CCTTTCGCCCTTGTTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR TCA 72 bp GTCCAGGAAGGAAAGCTCCACATGACCAGGCAGTACTaGGTGAGCTGCCATCTTCCCAGCCCCTCCCTAGCT +
Preference number: 3 (lower is better)
Translates to: VQEGKLHMTRQY*VSCHLPSPSLA
Trigger: AGCTAGGGAGGGGCTGGGAAGATGGCAGCTCACTCAGTACTGCCTGGTCATGTGGAGCTTTCCTTCCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR GCA 72 bp GGGGAAGGCTTGTCCATCAAAGAAATCCCTTGTCTCTaGCCTTCCCCCGTCCCGAACCAGGTGACGATCCCA +
Preference number: 3 (lower is better)
Translates to: GEGLSIKEIPCL*PSPVPNQVTIP
Trigger: TGGGATCGTCACCTGGTTCGGGACGGGGGAAGGGCAGAGACAAGGGATTTCTTTGATGGACAAGCCTTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR GCA 72 bp GAAATGCTGCTGCATGGAAAGTGGGCATCCAGACCCTaGCCAGCATGGCCTCAGCCTCTTCCTGTTCGTGGA +
Preference number: 3 (lower is better)
Translates to: EMLLHGKWASRP*PAWPQPLPVRG
Trigger: TCCACGAACAGGAAGAGGCTGAGGCCATGCTGGGCAGGGTCTGGATGCCCACTTTCCATGCAGCAGCATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR CCA 72 bp GATGGAGAAGCCTGGGCTGGAATGGAGGACGGTGGGTaGGGAAGTGTGTTGAGAGAGCAAACAGAGGGCAGA +
Preference number: 3 (lower is better)
Translates to: DGEAWAGMEDGG*GSVLREQTEGR
Trigger: TCTGCCCTCTGTTTGCTCTCTCAACACACTTCCCCACCCACCGTCCTCCATTCCAGCCCAGGCTTCTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR CCA 72 bp GGCCCCAGGAAGAACCACTTGCCTCATCCCTGTCTTTaGCAAGTGCACGGGTGGTGTGGAGGAAAGGATTCC +
Preference number: 3 (lower is better)
Translates to: GPRKNHLPHPCL*QVHGWCGGKDS
Trigger: GGAATCCTTTCCTCCACACCACCCGTGCACTTGCCAAAGACAGGGATGAGGCAAGTGGTTCTTCCTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR CAA 90 bp GAAAGTAGAAGGGCTAATACCCCCAAAGAACAAGGCCAACTACACCTGGTGAGCCCTGCCCTCCTCCCCTaGCACCTGGGCTTATCCCAC +
Preference number: 3 (lower is better)
Translates to: ESRRANTPKEQGQLHLVSPALLP*HLGLSH
Trigger: GTGGGATAAGCCCAGGTGCAAGGGGAGGAGGGCAGG...GCTCACCAGGTGTAGTTGGCCTTGTTCTTTGGGGGTATTAGCCCTTCTACTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR CCA 72 bp ACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTaGGCAGGACGAAGGGAATGTGGGAAACAAGGGCGA +
Preference number: 3 (lower is better)
Translates to: TDCFLPALQSRP*AGRRECGKQGR
Trigger: TCGCCCTTGTTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
3UTR-3UTR CAA 90 bp ACCCCCAAAGAACAAGGCCAACTACACCTGGTGAGCCTCAGAGGGACAGAAACCAAACCAAGTTGGACTTaGGTCCACCCCCAGGACCCT +
Preference number: 3 (lower is better)
Translates to: TPKEQGQLHLVSLRGTETKPSWT*VHPQDP
Trigger: AGGGTCCTGGGGGTGGACCAAAGTCCAACTTGGTTT...GGTTTCTGTCCCTCTGAGGCTCACCAGGTGTAGTTGGCCTTGTTCTTTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR GCA 72 bp CCTCAGAACAGGAGGCGCCATCTCCCTGCAATGCGTTaGAGGGGGAAGGCTTGTCCATCAAAGAAATCCCTT +
Preference number: 3 (lower is better)
Translates to: PQNRRRHLPAMR*RGKACPSKKSL
Trigger: AAGGGATTTCTTTGATGGACAAGCCTTCCCCCTGCAACGCATTGCAGGGAGATGGCGCCTCCTGTTCTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR GCA 72 bp CACTTCCTCAGAACAGGAGGCGCCATCTCCCTGCAATaGGTTGCAGGGGGAAGGCTTGTCCATCAAAGAAAT +
Preference number: 3 (lower is better)
Translates to: HFLRTGGAISLQ*VAGGRLVHQRN
Trigger: ATTTCTTTGATGGACAAGCCTTCCCCCTGCAACGCATTGCAGGGAGATGGCGCCTCCTGTTCTGAGGAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR CCA 72 bp GGCAAGTGCACGGGTGGTGTGGAGGAAAGGATTCCATaGGTGTCCAAAGATCTCACACTGCTAACACCCTCA +
Preference number: 3 (lower is better)
Translates to: GKCTGGVEERIP*VSKDLTLLTPS
Trigger: TGAGGGTGTTAGCAGTGTGAGATCTTTGGACACCCATGGAATCCTTTCCTCCACACCACCCGTGCACTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR CCA 72 bp GCCTCATCCCTGTCTTTGGCAAGTGCACGGGTGGTGTaGAGGAAAGGATTCCATGGGTGTCCAAAGATCTCA +
Preference number: 3 (lower is better)
Translates to: ASSLSLASARVV*RKGFHGCPKIS
Trigger: TGAGATCTTTGGACACCCATGGAATCCTTTCCTCCACACCACCCGTGCACTTGCCAAAGACAGGGATGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR CCA 72 bp CACTTGCCTCATCCCTGTCTTTGGCAAGTGCACGGGTaGTGTGGAGGAAAGGATTCCATGGGTGTCCAAAGA +
Preference number: 3 (lower is better)
Translates to: HLPHPCLWQVHG*CGGKDSMGVQR
Trigger: TCTTTGGACACCCATGGAATCCTTTCCTCCACACCACCCGTGCACTTGCCAAAGACAGGGATGAGGCAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR CAA 90 bp GACACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGTGCACTGAAACCAAGTaGGACTTTGGTCCACCCCCA +
Preference number: 3 (lower is better)
Translates to: DTQWKPHIVSWQTEERDVCTETK*DFGPPP
Trigger: TGGGGGTGGACCAAAGTCCAACTTGGTTTCAGTGCA...CACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR CCA 72 bp CCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTaGTGGGAGGAAAGGGGGATAGCAGAGACACACAGA +
Preference number: 3 (lower is better)
Translates to: PGFCCTFAHAHG*WEERGIAETHR
Trigger: TCTGTGTGTCTCTGCTATCCCCCTTTCCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR CCA 72 bp AGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATaGGTGGTGGGAGGAAAGGGGGATAGCAGAGACACA +
Preference number: 3 (lower is better)
Translates to: SPRVLLHICSCT*VVGGKGDSRDT
Trigger: TGTGTCTCTGCTATCCCCCTTTCCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR CCA 72 bp CCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTaGGAAGCTCAGCTTCATTTGACTGCAAAGTCCCAG +
Preference number: 3 (lower is better)
Translates to: PTSSHGKPKNGM*EAQLHLTAKSQ
Trigger: CTGGGACTTTGCAGTCAAATGAAGCTGAGCTTCCCACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR CCA 72 bp ATGACAGACACACAGTGGAAACCCCACATCGTCTCATaGCAAACCGAAGAACGGGATGTGGGAAGCTCAGCT +
Preference number: 3 (lower is better)
Translates to: MTDTQWKPHIVS*QTEERDVGSSA
Trigger: AGCTGAGCTTCCCACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTCTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR-3UTR CAA 90 bp ACCCCCAAAGAACAAGGCCAACTACACCTGGTGAGCCTCAGAGGGACAGAAACCGCAGCATTTCTAGTGTaGAGGGACAGAGTGCAAATG +
Preference number: 3 (lower is better)
Translates to: TPKEQGQLHLVSLRGTETAAFLV*RDRVQM
Trigger: CATTTGCACTCTGTCCCTCAACACTAGAAATGCTGC...GGTTTCTGTCCCTCTGAGGCTCACCAGGTGTAGTTGGCCTTGTTCTTTGGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR CAA 90 bp GGAAGGATGGTTTTGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCAGACCCAGGAAGAACCACTaGCCTCATCCCTGTCTTTGG +
Preference number: 3 (lower is better)
Translates to: GRMVLSNEMLLHGKWASRPRKNH*PHPCLW
Trigger: CCAAAGACAGGGATGAGGCAAGTGGTTCTTCCTGGG...TCTGGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAACCATCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR CCA 72 bp TTTACTTTCGAAAAGGGTACTGCACTGAAACCAAGTTaGACTTTGGTCCACCCCCAGGACCCTCTTCAGGCC +
Preference number: 3 (lower is better)
Translates to: FTFEKGTALKPS*TLVHPQDPLQA
Trigger: GGCCTGAAGAGGGTCCTGGGGGTGGACCAAAGTCCAACTTGGTTTCAGTGCAGTACCCTTTTCGAAAGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR CCA 72 bp GGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTaGGAGGAAAGGGGGATAGCAGAGACACACAGAAGA +
Preference number: 3 (lower is better)
Translates to: GFCCTFAHAHGW*EERGIAETHRR
Trigger: TCTTCTGTGTGTCTCTGCTATCCCCCTTTCCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR-3UTR CAA 90 bp GAAAGTAGAAGGGCTAATACCCCCAAAGAACAAGGCCAACTACACCTGGTGAGCATTCAGGTCTCTCCATaGTTAAGTGCCCCATCCCCA +
Preference number: 3 (lower is better)
Translates to: ESRRANTPKEQGQLHLVSIQVSP*LSAPSP
Trigger: TGGGGATGGGGCACTTAACAATGGAGAGACCTGAAT...GCTCACCAGGTGTAGTTGGCCTTGTTCTTTGGGGGTATTAGCCCTTCTACTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR-3UTR CAA 90 bp GAAAGTAGAAGGGCTAATACCCCCAAAGAACAAGGCCAACTACACCTGGTGAGCCAACTCTTTGGGGCTTaGGGGGAACTTGAGAGTACA +
Preference number: 3 (lower is better)
Translates to: ESRRANTPKEQGQLHLVSQLFGA*GELEST
Trigger: TGTACTCTCAAGTTCCCCCAAAGCCCCAAAGAGTTG...GCTCACCAGGTGTAGTTGGCCTTGTTCTTTGGGGGTATTAGCCCTTCTACTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR CAA 90 bp TTCCAGCTAGAAGCACATGGGACTGCTTCTAGGATGGAAACAAGTCCTGCTATTTTGCAGGGGGAAGGCTaGTCCATCAAAGAAATCCCT +
Preference number: 3 (lower is better)
Translates to: FQLEAHGTASRMETSPAILQGEG*SIKEIP
Trigger: AGGGATTTCTTTGATGGACAAGCCTTCCCCCTGCAA...AATAGCAGGACTTGTTTCCATCCTAGAAGCAGTCCCATGTGCTTCTAGCTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR-3UTR CAA 90 bp GTGTCCAAAGATCTCACACTGCTAACACCCTCACGCTCCTTCATCAACAGGAAGGCTAGATGGATTTATTaGGTGCCCTCATACAGAATG +
Preference number: 3 (lower is better)
Translates to: VSKDLTLLTPSRSFINRKARWIY*VPSYRM
Trigger: CATTCTGTATGAGGGCACCAAATAAATCCATCTAGC...CTTCCTGTTGATGAAGGAGCGTGAGGGTGTTAGCAGTGTGAGATCTTTGGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR TCA 72 bp GGACCCTCTTTAACGAGGGCAAGGAGTGGCTTCCTCTaGGCTTGTTACTTTCAAATTAAGCACTTGACTCAC +
Preference number: 3 (lower is better)
Translates to: GPSLTRARSGFL*ACYFQIKHLTH
Trigger: GTGAGTCAAGTGCTTAATTTGAAAGTAACAAGCTCAGAGGAAGCCACTCCTTGCCCTCGTTAAAGAGGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR-3UTR CAA 90 bp ACTCACTGTTTCTCTATAACTAACAGGCAATCTCTCTCTTTATGCCAACAATTATCTCCCTGCAATGCGTaGCAGGGGGAAGGCTTGTCC +
Preference number: 3 (lower is better)
Translates to: THCFSITNRQSLSLCQQLSPCNA*QGEGLS
Trigger: GGACAAGCCTTCCCCCTGCAACGCATTGCAGGGAGA...TAATTGTTGGCATAAAGAGAGAGATTGCCTGTTAGTTATAGAGAAACAGTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR-3UTR CAA 90 bp TACATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGTACAACTGTTGTTCCCAGGAAGAACCACTaGCCTCATCCCTGTCTTTGG +
Preference number: 3 (lower is better)
Translates to: YMTLVNMPHAFGGSTTVVPRKNH*PHPCLW
Trigger: CCAAAGACAGGGATGAGGCAAGTGGTTCTTCCTGGG...AACAACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR GCA 72 bp TTGTTCAGAATACATGACATTGGTAAATATGCCACATaGCTTTGGTGGAAGTACAACTGTTGTTATTACTCT +
Preference number: 3 (lower is better)
Translates to: LFRIHDIGKYAT*LWWKYNCCYYS
Trigger: AGAGTAATAACAACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTATTCTGAACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR CCA 72 bp ATACATGACATTGGTAAATATGCCACATGCCTTTGGTaGAAGTACAACTGTTGTTATTACTCTATACAAGTA +
Preference number: 3 (lower is better)
Translates to: IHDIGKYATCLW*KYNCCYYSIQV
Trigger: TACTTGTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR CCA 72 bp AGAATACATGACATTGGTAAATATGCCACATGCCTTTaGTGGAAGTACAACTGTTGTTATTACTCTATACAA +
Preference number: 3 (lower is better)
Translates to: RIHDIGKYATCL*WKYNCCYYSIQ
Trigger: TTGTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTATTCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR TCA 90 bp GCCGTTGGGAGGGTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCGGCGAGACACCCGGTaGGGGACGCTGCGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: AVGRVLTAFFQLFSPALGRRDTR*GTLRLK
Trigger: CTTCAGCCGCAGCGTCCCTCACCGGGTGTCTCGCCG...CCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTACCCTCCCAACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR GCA 90 bp GGCTGGTGGGTCTACATGACTTCTCTGCATCCTGAGGATCGGCCGGGCCCCAGGGAGGCGCCATCTCCCTaGAATGCGTTGCAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: GWWVYMTSLHPEDRPGPREAPSP*NALQGE
Trigger: TTCCCCCTGCAACGCATTGCAGGGAGATGGCGCCTC...CCTGGGGCCCGGCCGATCCTCAGGATGCAGAGAAGTCATGTAGACCCACCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361716.8
CDS-3UTR CCA 90 bp CTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGAGGGGGACCCCCACCTaGGGCAGTCCCTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LLSSSSSVPPLGRTKGMWRGTPT*GSPFCP
Trigger: GGGACAGAAGGGACTGCCCCAGGTGGGGGTCCCCCT...CCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR TCA 90 bp CACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGGGCGGCGAGACACCCGGTaGGGGACGCTGCGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: HTVETPHRLMANRRTGCGRRDTR*GTLRLK
Trigger: CTTCAGCCGCAGCGTCCCTCACCGGGTGTCTCGCCG...CCCACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR GCA 90 bp TTGGACTTTGGTCCACCCCCAGGACCCTCTTCAGGCCTGGTCCAGGAAGGAAAGTTCCTCTCCGGAGGCTaGGGCGAGACACCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: LDFGPPPGPSSGLVQEGKFLSGG*GETPGE
Trigger: CTCACCGGGTGTCTCGCCGCAGCCTCCGGAGAGGAA...CTTTCCTTCCTGGACCAGGCCTGAAGAGGGTCCTGGGGGTGGACCAAAGTCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp CTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGTTCCTCTCCGGAGGCTaGGGCGAGACACCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: LLSSSSSVPPLGRTKGMWFLSGG*GETPGE
Trigger: CTCACCGGGTGTCTCGCCGCAGCCTCCGGAGAGGAA...CCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR TCA 90 bp CAGACACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGCGGCGAGACACCCGGTaGGGGACGCTGCGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QTHSGNPTSSHGKPKNGMRRDTR*GTLRLK
Trigger: CTTCAGCCGCAGCGTCCCTCACCGGGTGTCTCGCCG...CATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR TCA 90 bp GATTCCTGTGATAGGGCTGGGAGAGCCAAGAGGACGGATTCGCTCCAGGCTTGGCCGTCCCGAACCAGGTaGCGATCCCATAGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: DSCDRAGRAKRTDSLQAWPSRTR*RSHSSG
Trigger: ACCGCTGCTATGGGATCGTCACCTGGTTCGGGACGG...CCAAGCCTGGAGCGAATCCGTCCTCTTGGCTCTCCCAGCCCTATCACAGGAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361716.8
CDS-3UTR GCA 90 bp TGGGAGGGTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGATGGGCATCCAGACCCTaGCCAGCATGGCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: WEGTDCFLPALQSRPWAGWASRP*PAWPQP
Trigger: AGGCTGAGGCCATGCTGGGCAGGGTCTGGATGCCCA...TCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTACCCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR GCA 90 bp GTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGCCAGCGGTGACCCCCTaGATTAGGCAAGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: VLTAFFQLFSPALGQDEGPAVTP*IRQGGA
Trigger: GGCTCCTCCTTGCCTAATGCAGGGGGTCACCGCTGG...CCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CCA 90 bp CAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAACAAGGGCACGCTGCGGCTGAAGTaGACGGAACTGCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: QLFSPALGQDEGNVGNKGTLRLK*TELPSS
Trigger: GGAGCTTGGCAGTTCCGTCCACTTCAGCCGCAGCGT...GCCCTTGTTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CCA 90 bp CCTCATCCCTGTCTTTGGCAAGTGCACGGGTGGTGTGGAGGAAAGGATTCCATGAGGGGGACCCCCACCTaGGGCAGTCCCTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PHPCLWQVHGWCGGKDSMRGTPT*GSPFCP
Trigger: GGGACAGAAGGGACTGCCCCAGGTGGGGGTCCCCCT...CATGGAATCCTTTCCTCCACACCACCCGTGCACTTGCCAAAGACAGGGATGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp ACCCCCAAAGAACAAGGCCAACTACACCTGGTGAGCCTCAGAGGGACAGAAACCAGGGGGACCCCCACCTaGGGCAGTCCCTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TPKEQGQLHLVSLRGTETRGTPT*GSPFCP
Trigger: GGGACAGAAGGGACTGCCCCAGGTGGGGGTCCCCCT...GGTTTCTGTCCCTCTGAGGCTCACCAGGTGTAGTTGGCCTTGTTCTTTGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp GATAGGGCTGGGAGAGCCAAGAGGACGGATTCGCTCCAGGCTTGGGACACATCGAGTGCCCCATCCCCATaGTCTCCCTCCAACCCAAGC +
Preference number: 4 (lower is better)
Translates to: DRAGRAKRTDSLQAWDTSSAPSP*SPSNPS
Trigger: GCTTGGGTTGGAGGGAGACCATGGGGATGGGGCACT...CGATGTGTCCCAAGCCTGGAGCGAATCCGTCCTCTTGGCTCTCCCAGCCCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361716.8
CDS-3UTR CCA 90 bp TGGGTCTACATGACTTCTCTGCATCCTGAGGATCGGCCGGGCCCCAGGAAGAACTGGAGAAGCCTGGGCTaGAATGGAGGACGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: WVYMTSLHPEDRPGPRKNWRSLG*NGGRWV
Trigger: CACCCACCGTCCTCCATTCCAGCCCAGGCTTCTCCA...GTTCTTCCTGGGGCCCGGCCGATCCTCAGGATGCAGAGAAGTCATGTAGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp CACATCGAGGACAGTGGTGGTTCTTCTCCAGCGGTGACCCCCTGCATTAGGCAAGCCCCGAAGATAGGCTaGGCAGATCCCATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: HIEDSGGSSPAVTPCIRQAPKIG*ADPILR
Trigger: CCTGAGGATGGGATCTGCTCAGCCTATCTTCGGGGC...TTGCCTAATGCAGGGGGTCACCGCTGGAGAAGAACCACCACTGTCCTCGATGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp GTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGGTTCTTCTCCAGCGGTaGCCCCCTGCATTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: VLTAFFQLFSPALGQDEGVLLQR*PPALGK
Trigger: CTTGCCTAATGCAGGGGGTCACCGCTGGAGAAGAAC...CCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR GCA 90 bp GACACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGTTCCTCTCCGGAGGCTaGGGCGAGACACCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: DTQWKPHIVSWQTEERDVFLSGG*GETPGE
Trigger: CTCACCGGGTGTCTCGCCGCAGCCTCCGGAGAGGAA...CACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp GATTCCTGTGATAGGGCTGGGAGAGCCAAGAGGACGGATTCGCTCCAGGCTTGGGTCTGGGCAGCTTCATaGGTACTTCGCCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: DSCDRAGRAKRTDSLQAWVWAAS*VLRLSH
Trigger: GTGGCTGAGGCGAAGTACCCATGAAGCTGCCCAGAC...CCAAGCCTGGAGCGAATCCGTCCTCTTGGCTCTCCCAGCCCTATCACAGGAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp GATAGGGCTGGGAGAGCCAAGAGGACGGATTCGCTCCAGGCTTGGGACACATCGCATGCACATGGGTGGTaGGAGGAAAGGGGGATAGCA +
Preference number: 4 (lower is better)
Translates to: DRAGRAKRTDSLQAWDTSHAHGW*EERGIA
Trigger: TGCTATCCCCCTTTCCTCCCACCACCCATGTGCATG...CGATGTGTCCCAAGCCTGGAGCGAATCCGTCCTCTTGGCTCTCCCAGCCCTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp CAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAACAAGGGCAGACCCTGCCCAGCATaGCCTCAGCCTCTTCTTACA +
Preference number: 4 (lower is better)
Translates to: QLFSPALGQDEGNVGNKGRPCPA*PQPLLT
Trigger: TGTAAGAAGAGGCTGAGGCCATGCTGGGCAGGGTCT...GCCCTTGTTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535180.5
CDS-3UTR TCA 90 bp GGTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGAAAAGGAGGAATGGGTaGTGGAGAAGCCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GTDCFLPALQSRPWAGRRKRRNG*WRSLGW
Trigger: CCAGCCCAGGCTTCTCCATCACCCATTCCTCCTTTT...CCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp CCTCATCCCTGTCTTTGGCAAGTGCACGGGTGGTGTGGAGGAAAGGATTCCATGCCAGGCAGTACTGAGTaGGCTGCCATCTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: PHPCLWQVHGWCGGKDSMPGSTE*AAIFPA
Trigger: GGCTGGGAAGATGGCAGCTCACTCAGTACTGCCTGG...CATGGAATCCTTTCCTCCACACCACCCGTGCACTTGCCAAAGACAGGGATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp CTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAGTTCTTCTCCAGCGGTaGCCCCCTGCATTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LSSSSSVPPLGRTKGMWEVLLQR*PPALGK
Trigger: CTTGCCTAATGCAGGGGGTCACCGCTGGAGAAGAAC...TTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR GCA 90 bp TGGGAGAGCCAAGAGGACGGATTCGCTCCAGGCTTGGGACACATCGAGGACAGTTGTGATGCTCCTGCCTaGAAGGCATCAGCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: WESQEDGFAPGLGHIEDSCDAPA*KASARS
Trigger: TGACCGAGCTGATGCCTTGCAGGCAGGAGCATCACA...ACTGTCCTCGATGTGTCCCAAGCCTGGAGCGAATCCGTCCTCTTGGCTCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR GCA 90 bp CCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAACAAGGGCGAAAGGAAAGGACCTGTCTTTGGCAAGTaGACGGGTGGTGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: PALGQDEGNVGNKGERKGPVFGK*TGGVEE
Trigger: TTCCTCCACACCACCCGTGCACTTGCCAAAGACAGG...TCCTTTCCTTTCGCCCTTGTTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp CACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGGGAATGGGCATCCAGACCCTaGCCAGCATGGCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: HSGNPTSSHGKPKNGMWEWASRP*PAWPQP
Trigger: AGGCTGAGGCCATGCTGGGCAGGGTCTGGATGCCCA...TTCCCACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp GCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGAGGCCAGCGGTGACCCCCTaGATTAGGCAAGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: AKSQGFVAHLLMHMGGGRPAVTP*IRQGGA
Trigger: GGCTCCTCCTTGCCTAATGCAGGGGGTCACCGCTGG...CCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp CCCCAAAGAACAAGGCCAACTACACCTGGTGAGCCTCAGAGGGACAGAAACCCAACGCTGCGGCTGAAGTaGACGGAACTGCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: PQRTRPTTPGEPQRDRNPTLRLK*TELPSS
Trigger: GGAGCTTGGCAGTTCCGTCCACTTCAGCCGCAGCGT...TGGGTTTCTGTCCCTCTGAGGCTCACCAGGTGTAGTTGGCCTTGTTCTTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp GTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGTGTCCCTTCAGCAGGTaGCTGAGCTGGAGCAGACAT +
Preference number: 4 (lower is better)
Translates to: VLTAFFQLFSPALGQDEGCPFSR*LSWSRH
Trigger: ATGTCTGCTCCAGCTCAGCCACCTGCTGAAGGGACA...CCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CCA 90 bp GAGGGTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAACCAAGTTGGACTTTaGTCCACCCCCAGGACCCTC +
Preference number: 4 (lower is better)
Translates to: EGTDCFLPALQSRPWAGRNQVGL*STPRTL
Trigger: GAGGGTCCTGGGGGTGGACCAAAGTCCAACTTGGTT...TCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp TGGGAGAGCCAAGAGGACGGATTCGCTCCAGGCTTGGGACACATCGAGGACAGTTGGCAAGTGCACGGGTaGTGTGGAGGAAAGGATTCC +
Preference number: 4 (lower is better)
Translates to: WESQEDGFAPGLGHIEDSWQVHG*CGGKDS
Trigger: GGAATCCTTTCCTCCACACCACCCGTGCACTTGCCA...ACTGTCCTCGATGTGTCCCAAGCCTGGAGCGAATCCGTCCTCTTGGCTCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp TGGGAGGGTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACCAAGGTGGGGCTGGTaGGTCTACATGACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: WEGTDCFLPALQSRPWAGPRWGW*VYMTSL
Trigger: CAGAGAAGTCATGTAGACCCACCAGCCCCACCTTGG...TCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTACCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp GCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCAGACCCTGCCCAGCATGGCCTTCAGTCCCGCCCTTaGGCAGGACGAAGGGAATGT +
Preference number: 4 (lower is better)
Translates to: AMKCCCMESGHPDPAQHGLQSRP*AGRREC
Trigger: ACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAG...GCCATGCTGGGCAGGGTCTGGATGCCCACTTTCCATGCAGCAGCATTTCATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CCA 90 bp GTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGGATTCGCTCCAGGCTTaGGACACATCGAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: VLTAFFQLFSPALGQDEGDSLQA*DTSRTV
Trigger: CACTGTCCTCGATGTGTCCCAAGCCTGGAGCGAATC...CCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR TCA 90 bp TGGGAAGCTCAGCTTCATTTGACTGCAAAGTCCCAGGGTTTTGTTGCACATTTGCGGCGAGACACCCGGTaGGGGACGCTGCGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: WEAQLHLTAKSQGFVAHLRRDTR*GTLRLK
Trigger: CTTCAGCCGCAGCGTCCCTCACCGGGTGTCTCGCCG...CAAATGTGCAACAAAACCCTGGGACTTTGCAGTCAAATGAAGCTGAGCTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR TCA 90 bp CTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGCCTTCAGCAGGTGGCTaGGCTGGAGCAGACATTTTT +
Preference number: 4 (lower is better)
Translates to: LLSSSSSVPPLGRTKGMWPSAGG*AGADIF
Trigger: AAAAATGTCTGCTCCAGCTCAGCCACCTGCTGAAGG...CCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR TCA 90 bp CACATCGAGGACAGTGGTGGTTCTTCTCCAGCGGTGACCCCCTGCATTAGGCAAAAAAGGAGGAATGGGTaGTGGAGAAGCCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HIEDSGGSSPAVTPCIRQKRRNG*WRSLGW
Trigger: CCAGCCCAGGCTTCTCCATCACCCATTCCTCCTTTT...TTGCCTAATGCAGGGGGTCACCGCTGGAGAAGAACCACCACTGTCCTCGATGTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp GCCGTTGGGAGGGTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGGGCTTTGGGGGAACTTaGGAGTACAGAAAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: AVGRVLTAFFQLFSPALGGFGGT*EYRKSR
Trigger: CCTGCTTTTTCTGTACTCTCAAGTTCCCCCAAAGCC...CCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTACCCTCCCAACGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp ACTTGCCTCATCCCTGTCTTTGGCAAGTGCACGGGTGGTGTGGAGGAAAGGATTCCAGGCAGTACTGAGTaGGCTGCCATCTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: TCLIPVFGKCTGGVEERIPGSTE*AAIFPA
Trigger: GGCTGGGAAGATGGCAGCTCACTCAGTACTGCCTGG...AATCCTTTCCTCCACACCACCCGTGCACTTGCCAAAGACAGGGATGAGGCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp TGCAGGGGGAAGGCTTGTCCATCAAAGAAATCCCTTGTCTCTGCCCTTCCCCCGCCGTTGGGAGGGTACTaGCTGCTTTCTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: CRGKACPSKKSLVSALPPPLGGY*LLSSSS
Trigger: AGAGCTGGAAGAAAGCAGTCAGTACCCTCCCAACGG...CGGGGGAAGGGCAGAGACAAGGGATTTCTTTGATGGACAAGCCTTCCCCCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361716.8
CDS-3UTR TCA 90 bp AGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAACAAGGGCGAAAGGAAACCGTTGGGAGGGTACTaGCTGCTTTCTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SPALGQDEGNVGNKGERKPLGGY*LLSSSS
Trigger: AGAGCTGGAAGAAAGCAGTCAGTACCCTCCCAACGG...TTTCCTTTCGCCCTTGTTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR TCA 90 bp GGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGGGAAGCTCAGGTTCTTCTCCAGCGGTaGCCCCCTGCATTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: GNPTSSHGKPKNGMWEAQVLLQR*PPALGK
Trigger: CTTGCCTAATGCAGGGGGTCACCGCTGGAGAAGAAC...CTGAGCTTCCCACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR GCA 90 bp AGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAACAAGGGCGAAAGGAAATGTGATGCTCCTGCCTaGAAGGCATCAGCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: SPALGQDEGNVGNKGERKCDAPA*KASARS
Trigger: TGACCGAGCTGATGCCTTGCAGGCAGGAGCATCACA...TTTCCTTTCGCCCTTGTTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR GCA 90 bp CTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGGGAGGCGCCAGCTGTTaGTCTTCGGGTAATGACTTA +
Preference number: 4 (lower is better)
Translates to: LLSSSSSVPPLGRTKGMWGGASC*SSGNDL
Trigger: TAAGTCATTACCCGAAGAGCAACAGCTGGCGCCTCC...CCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp CTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAATGTCCCTTCAGCAGGTaGCTGAGCTGGAGCAGACAT +
Preference number: 4 (lower is better)
Translates to: LSSSSSVPPLGRTKGMWECPFSR*LSWSRH
Trigger: ATGTCTGCTCCAGCTCAGCCACCTGCTGAAGGGACA...TTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CCA 90 bp TTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAACAAGGGCGAAAGGTCCTCCACTTGTGCCTaGGTTTGCTGTAGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: FSPALGQDEGNVGNKGERSSTCA*VCCSRL
Trigger: CAGACGACTACAGCAAACCCAGGCACAAGTGGAGGA...CCTTTCGCCCTTGTTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CCA 90 bp CAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAACAAGGGCCCTAGCTCCTACCAGTaGCCAGGTTTTCTAGAAGTC +
Preference number: 4 (lower is better)
Translates to: QLFSPALGQDEGNVGNKGPSSYQ*PGFLEV
Trigger: GACTTCTAGAAAACCTGGCCACTGGTAGGAGCTAGG...GCCCTTGTTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp TTGGGACACATCGAGGACAGTGGTGGTTCTTCTCCAGCGGTGACCCCCTGCATTAGTGCACGGGTGGTGTaGAGGAAAGGATTCCATGGG +
Preference number: 4 (lower is better)
Translates to: LGHIEDSGGSSPAVTPCISARVV*RKGFHG
Trigger: CCCATGGAATCCTTTCCTCCACACCACCCGTGCACT...AATGCAGGGGGTCACCGCTGGAGAAGAACCACCACTGTCCTCGATGTGTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp CCAGGAATGATTCCTGTGATAGGGCTGGGAGAGCCAAGAGGACGGATTCGCTCCCCTCATCCCTGTCTTTaGCAAGTGCACGGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: PGMIPVIGLGEPRGRIRSPHPCL*QVHGWC
Trigger: ACACCACCCGTGCACTTGCCAAAGACAGGGATGAGG...GGAGCGAATCCGTCCTCTTGGCTCTCCCAGCCCTATCACAGGAATCATTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp TTGGACTTTGGTCCACCCCCAGGACCCTCTTCAGGCCTGGTCCAGGAAGGAAAGGCCTCTTCCTGTTCGTaGACCGAGGGAAGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LDFGPPPGPSSGLVQEGKASSCS*TEGRRN
Trigger: ATTCCTTCTTCCCTCGGTCCACGAACAGGAAGAGGC...CTTTCCTTCCTGGACCAGGCCTGAAGAGGGTCCTGGGGGTGGACCAAAGTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp CACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGGGCTGCTGCATGGAAAGTaGGCATCCAGACCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: HTVETPHRLMANRRTGCGLLHGK*ASRPCP
Trigger: TGGGCAGGGTCTGGATGCCCACTTTCCATGCAGCAG...CCCACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp TTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAACTGCTGCATGGAAAGTaGGCATCCAGACCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: FLPALQSRPWAGRRECGKLLHGK*ASRPCP
Trigger: TGGGCAGGGTCTGGATGCCCACTTTCCATGCAGCAG...TTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CCA 90 bp CCTCATCCCTGTCTTTGGCAAGTGCACGGGTGGTGTGGAGGAAAGGATTCCATGCTTCAGTCCCGCCCTTaGGCAGGACGAAGGGAATGT +
Preference number: 4 (lower is better)
Translates to: PHPCLWQVHGWCGGKDSMLQSRP*AGRREC
Trigger: ACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAG...CATGGAATCCTTTCCTCCACACCACCCGTGCACTTGCCAAAGACAGGGATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp GGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGGGAAGCTCAGCTTCAGTCCCGCCCTTaGGCAGGACGAAGGGAATGT +
Preference number: 4 (lower is better)
Translates to: GNPTSSHGKPKNGMWEAQLQSRP*AGRREC
Trigger: ACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAG...CTGAGCTTCCCACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp ATCGAGGACAGTGGTGGTTCTTCTCCAGCGGTGACCCCCTGCATTAGGCAAGGACATCGAGGACAGTGGTaGTTCTTCTCCAGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: IEDSGGSSPAVTPCIRQGHRGQW*FFSSGD
Trigger: GTCACCGCTGGAGAAGAACCACCACTGTCCTCGATG...TCCTTGCCTAATGCAGGGGGTCACCGCTGGAGAAGAACCACCACTGTCCTCGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
ENST00000535180.5
CDS-3UTR CCA 90 bp CCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAACAAGGGCGAAAGGAAAGGAACACATCGAGGACAGTaGTGGTTCTTCTCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: PALGQDEGNVGNKGERKGTHRGQ*WFFSSG
Trigger: ACCGCTGGAGAAGAACCACCACTGTCCTCGATGTGT...TCCTTTCCTTTCGCCCTTGTTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CCA 90 bp TGGGAGGGTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGAACACATCGAGGACAGTaGTGGTTCTTCTCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: WEGTDCFLPALQSRPWAGTHRGQ*WFFSSG
Trigger: ACCGCTGGAGAAGAACCACCACTGTCCTCGATGTGT...TCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTACCCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CCA 90 bp AAACCAAGTTGGACTTTGGTCCACCCCCAGGACCCTCTTCAGGCCTGGTCCAGGCCCCACATCGTCTCATaGCAAACCGAAGAACGGGAT +
Preference number: 4 (lower is better)
Translates to: KPSWTLVHPQDPLQAWSRPHIVS*QTEERD
Trigger: ATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGG...CCTGGACCAGGCCTGAAGAGGGTCCTGGGGGTGGACCAAAGTCCAACTTGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR CAA 72 bp GCGCCATCTCCCTGCAATGCGTTGCAGGGGGAAGGCTaGTCCATCAAAGAAATCCCTTGTCTCTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: APSPCNALQGEG*SIKEIPCLCPS
Trigger: GGAAGGGCAGAGACAAGGGATTTCTTTGATGGACAAGCCTTCCCCCTGCAACGCATTGCAGGGAGATGGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361716.8
CDS-3UTR TCA 90 bp ACCCCCAAAGAACAAGGCCAACTACACCTGGTGAGCCTCAGAGGGACAGAAACCCCACGTTCACACGTATaGTGTCCACCACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TPKEQGQLHLVSLRGTETPRSHV*CPPPPP
Trigger: TGGAGGAGGTGGTGGACATCATACGTGTGAACGTGG...GGTTTCTGTCCCTCTGAGGCTCACCAGGTGTAGTTGGCCTTGTTCTTTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR TCA 90 bp GGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGGGAAGCTCAGCCGTTGGGAGGGTACTaGCTGCTTTCTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GNPTSSHGKPKNGMWEAQPLGGY*LLSSSS
Trigger: AGAGCTGGAAGAAAGCAGTCAGTACCCTCCCAACGG...CTGAGCTTCCCACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR GCA 90 bp CTCCTACCAGTGGCCAGGTTTTCTAGAAGTCACCATGGGCACCGATACTCTTCTCTGCCCTCCTCCCCTTaGACCTGGGCTTATCCCACA +
Preference number: 4 (lower is better)
Translates to: LLPVARFSRSHHGHRYSSLPSSP*TWAYPT
Trigger: TGTGGGATAAGCCCAGGTGCAAGGGGAGGAGGGCAG...AGAAGAGTATCGGTGCCCATGGTGACTTCTAGAAAACCTGGCCACTGGTAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp AGTGGTGGTTCTTCTCCAGCGGTGACCCCCTGCATTAGGCAAGGAGGAGCCCAGGCAATGAAATGCTGCTaGATGGAAAGTGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: SGGSSPAVTPCIRQGGAQAMKCC*MESGHP
Trigger: TGGATGCCCACTTTCCATGCAGCAGCATTTCATTGC...CTGGGCTCCTCCTTGCCTAATGCAGGGGGTCACCGCTGGAGAAGAACCACCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CCA 90 bp CACATCGAGGACAGTGGTGGTTCTTCTCCAGCGGTGACCCCCTGCATTAGGCAATCCTCCACTTGTGCCTaGGTTTGCTGTAGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: HIEDSGGSSPAVTPCIRQSSTCA*VCCSRL
Trigger: CAGACGACTACAGCAAACCCAGGCACAAGTGGAGGA...TTGCCTAATGCAGGGGGTCACCGCTGGAGAAGAACCACCACTGTCCTCGATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
ENST00000535180.5
CDS-3UTR CCA 90 bp GAACAGGAGGCGCCATCTCCCTGCAATGCGTTGCAGGGGGAAGGCTTGTCCATCGGACATGAATGTGGATaGCAATGGACAACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: EQEAPSPCNALQGEGLSIGHECG*QWTTGK
Trigger: CTTCCCTGTTGTCCATTGCCATCCACATTCATGTCC...GATGGACAAGCCTTCCCCCTGCAACGCATTGCAGGGAGATGGCGCCTCCTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361716.8
CDS-3UTR CCA 90 bp GAGGTGATGACAGACACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAATGGAGAAGCCTGGGCTaGAATGGAGGACGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: EVMTDTQWKPHIVSWQTEWRSLG*NGGRWV
Trigger: CACCCACCGTCCTCCATTCCAGCCCAGGCTTCTCCA...TTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTCTGTCATCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp TGGGAGAGCCAAGAGGACGGATTCGCTCCAGGCTTGGGACACATCGAGGACAGTAGGAATAAAGGGCCATaGGCATTCTCCGCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: WESQEDGFAPGLGHIEDSRNKGP*AFSALF
Trigger: GAACAGAGCGGAGAATGCCCATGGCCCTTTATTCCT...ACTGTCCTCGATGTGTCCCAAGCCTGGAGCGAATCCGTCCTCTTGGCTCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp TTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAACATGCACATGGGTGGTaGGAGGAAAGGGGGATAGCA +
Preference number: 4 (lower is better)
Translates to: FLPALQSRPWAGRRECGKHAHGW*EERGIA
Trigger: TGCTATCCCCCTTTCCTCCCACCACCCATGTGCATG...TTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
3UTR CAA 72 bp TCCTCAGAACAGGAGGCGCCATCTCCCTGCAATGCGTaGCAGGGGGAAGGCTTGTCCATCAAAGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: SSEQEAPSPCNA*QGEGLSIKEIP
Trigger: AGGGATTTCTTTGATGGACAAGCCTTCCCCCTGCAACGCATTGCAGGGAGATGGCGCCTCCTGTTCTGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361716.8
3UTR CAA 72 bp TTCGAAAAGGGTACTGCACTGAAACCAAGTTGGACTTaGGTCCACCCCCAGGACCCTCTTCAGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: FEKGTALKPSWT*VHPQDPLQAWS
Trigger: GGACCAGGCCTGAAGAGGGTCCTGGGGGTGGACCAAAGTCCAACTTGGTTTCAGTGCAGTACCCTTTTCGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp AGTGGTGGTTCTTCTCCAGCGGTGACCCCCTGCATTAGGCAAGGAGGAGCCCAGAGATGGCTCCCAGCATaGTCATCATCTTGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: SGGSSPAVTPCIRQGGAQRWLPA*SSSCSF
Trigger: AAAACTGCAAGATGATGATCATGCTGGGAGCCATCT...CTGGGCTCCTCCTTGCCTAATGCAGGGGGTCACCGCTGGAGAAGAACCACCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
ENST00000535180.5
CDS-3UTR TCA 90 bp AGTCACCATGGGCACCGATACTCTTCTCCTCCCAAGTCTGGGCAGCTTCATGGGGGGACAGAGTGCAAATaGACGCAACGAAAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SHHGHRYSSPPKSGQLHGGTECK*TQRKRR
Trigger: CCTCCTTTTTCGTTGCGTTCATTTGCACTCTGTCCC...CCCATGAAGCTGCCCAGACTTGGGAGGAGAAGAGTATCGGTGCCCATGGTGACT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp GACACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGATGACCAGGCAGTACTaGGTGAGCTGCCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: DTQWKPHIVSWQTEERDVMTRQY*VSCHLP
Trigger: GGGAAGATGGCAGCTCACTCAGTACTGCCTGGTCAT...CACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp GAGGTGATGACAGACACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAATACACAAGCACACCTaGCACAGGCTGGCACGCCTC +
Preference number: 4 (lower is better)
Translates to: EVMTDTQWKPHIVSWQTEIHKHT*HRLARL
Trigger: GAGGCGTGCCAGCCTGTGTCAGGTGTGCTTGTGTAT...TTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTCTGTCATCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp GTGTCCAAAGATCTCACACTGCTAACACCCTCACGCTCCTTCATCAACAGGAAGGCCCCGAAGATAGGCTaGGCAGATCCCATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: VSKDLTLLTPSRSFINRKAPKIG*ADPILR
Trigger: CCTGAGGATGGGATCTGCTCAGCCTATCTTCGGGGC...CTTCCTGTTGATGAAGGAGCGTGAGGGTGTTAGCAGTGTGAGATCTTTGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp GTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGAGGAAAGGCCGTTGGGAGGGTACTaGCTGCTTTCTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VPGFCCTFAHAHGWWEERPLGGY*LLSSSS
Trigger: AGAGCTGGAAGAAAGCAGTCAGTACCCTCCCAACGG...CCTTTCCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR TCA 90 bp GTTTTGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCAGACCCTGCCCAGTTCTTCTCCAGCGGTaGCCCCCTGCATTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: VLSNEMLLHGKWASRPCPVLLQR*PPALGK
Trigger: CTTGCCTAATGCAGGGGGTCACCGCTGGAGAAGAAC...TGGGCAGGGTCTGGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR TCA 90 bp GTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGAGGAAAGGGCCAACTACACCTGGTaGGCCTCAGAGGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: VPGFCCTFAHAHGWWEERANYTW*ASEGQK
Trigger: TTTCTGTCCCTCTGAGGCTCACCAGGTGTAGTTGGC...CCTTTCCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR GCA 90 bp CAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAACAAGGGCTTAGCTTGGCAGCACTaGTCTCAAATTGTGATGCTC +
Preference number: 4 (lower is better)
Translates to: QLFSPALGQDEGNVGNKGLAWQH*SQIVML
Trigger: GAGCATCACAATTTGAGAGCAGTGCTGCCAAGCTAA...GCCCTTGTTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR GCA 90 bp TGGGTCTACATGACTTCTCTGCATCCTGAGGATCGGCCGGGCCCCAGGAAGAACGCAATGAAATGCTGCTaGATGGAAAGTGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: WVYMTSLHPEDRPGPRKNAMKCC*MESGHP
Trigger: TGGATGCCCACTTTCCATGCAGCAGCATTTCATTGC...GTTCTTCCTGGGGCCCGGCCGATCCTCAGGATGCAGAGAAGTCATGTAGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp CCAGGAATGATTCCTGTGATAGGGCTGGGAGAGCCAAGAGGACGGATTCGCTCCTGGGAGGGTACTGACTaGTTTCTTCCAGCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PGMIPVIGLGEPRGRIRSWEGTD*FLPALQ
Trigger: CTGAAGAGCTGGAAGAAAGCAGTCAGTACCCTCCCA...GGAGCGAATCCGTCCTCTTGGCTCTCCCAGCCCTATCACAGGAATCATTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp ATGGTTTTGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCAGACCCTGCACGCTGCGGCTGAAGTaGACGGAACTGCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: MVLSNEMLLHGKWASRPCTLRLK*TELPSS
Trigger: GGAGCTTGGCAGTTCCGTCCACTTCAGCCGCAGCGT...GCAGGGTCTGGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CCA 90 bp CCTCATCCCTGTCTTTGGCAAGTGCACGGGTGGTGTGGAGGAAAGGATTCCATGGCACTGAAACCAAGTTaGACTTTGGTCCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: PHPCLWQVHGWCGGKDSMALKPS*TLVHPQ
Trigger: CTGGGGGTGGACCAAAGTCCAACTTGGTTTCAGTGC...CATGGAATCCTTTCCTCCACACCACCCGTGCACTTGCCAAAGACAGGGATGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp AGTGGTGGTTCTTCTCCAGCGGTGACCCCCTGCATTAGGCAAGGAGGAGCCCAGGAGGAAAGGATTCCATaGGTGTCCAAAGATCTCACA +
Preference number: 4 (lower is better)
Translates to: SGGSSPAVTPCIRQGGAQEERIP*VSKDLT
Trigger: TGTGAGATCTTTGGACACCCATGGAATCCTTTCCTC...CTGGGCTCCTCCTTGCCTAATGCAGGGGGTCACCGCTGGAGAAGAACCACCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp CTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGTCCTCCCCTTGCACCTaGGCTTATCCCACATTAATA +
Preference number: 4 (lower is better)
Translates to: LLSSSSSVPPLGRTKGMWSSPCT*AYPTLI
Trigger: TATTAATGTGGGATAAGCCCAGGTGCAAGGGGAGGA...CCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp CACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGGGACACATCGAGGACAGTaGTGGTTCTTCTCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: HTVETPHRLMANRRTGCGTHRGQ*WFFSSG
Trigger: ACCGCTGGAGAAGAACCACCACTGTCCTCGATGTGT...CCCACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp GCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGAGGGATTCGCTCCAGGCTTaGGACACATCGAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: AKSQGFVAHLLMHMGGGRDSLQA*DTSRTV
Trigger: CACTGTCCTCGATGTGTCCCAAGCCTGGAGCGAATC...CCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp ACTTGCCTCATCCCTGTCTTTGGCAAGTGCACGGGTGGTGTGGAGGAAAGGATTCATGCACATGGGTGGTaGGAGGAAAGGGGGATAGCA +
Preference number: 4 (lower is better)
Translates to: TCLIPVFGKCTGGVEERIHAHGW*EERGIA
Trigger: TGCTATCCCCCTTTCCTCCCACCACCCATGTGCATG...AATCCTTTCCTCCACACCACCCGTGCACTTGCCAAAGACAGGGATGAGGCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp GGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGGGAAGCTCAGCCCCACATCGTCTCATaGCAAACCGAAGAACGGGAT +
Preference number: 4 (lower is better)
Translates to: GNPTSSHGKPKNGMWEAQPHIVS*QTEERD
Trigger: ATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGG...CTGAGCTTCCCACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp TGGGTCTACATGACTTCTCTGCATCCTGAGGATCGGCCGGGCCCCAGGAAGAACATGACAGACACACAGTaGAAACCCCACATCGTCTCA +
Preference number: 4 (lower is better)
Translates to: WVYMTSLHPEDRPGPRKNMTDTQ*KPHIVS
Trigger: TGAGACGATGTGGGGTTTCCACTGTGTGTCTGTCAT...GTTCTTCCTGGGGCCCGGCCGATCCTCAGGATGCAGAGAAGTCATGTAGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp AAACCAAGTTGGACTTTGGTCCACCCCCAGGACCCTCTTCAGGCCTGGTCCAGGAGATGGCTCCCAGCATaGTCATCATCTTGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: KPSWTLVHPQDPLQAWSRRWLPA*SSSCSF
Trigger: AAAACTGCAAGATGATGATCATGCTGGGAGCCATCT...CCTGGACCAGGCCTGAAGAGGGTCCTGGGGGTGGACCAAAGTCCAACTTGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp GGTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGAGATGGCTCCCAGCATaGTCATCATCTTGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: GTDCFLPALQSRPWAGRRRWLPA*SSSCSF
Trigger: AAAACTGCAAGATGATGATCATGCTGGGAGCCATCT...CCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR TCA 90 bp TTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAAGGGACAGAGTGCAAATaGACGCAACGAAAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: FLPALQSRPWAGRRECGKGTECK*TQRKRR
Trigger: CCTCCTTTTTCGTTGCGTTCATTTGCACTCTGTCCC...TTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp GATTCCTGTGATAGGGCTGGGAGAGCCAAGAGGACGGATTCGCTCCAGGCTTGGAAAAGGGTACTGCACTaGAACCAAGTTGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: DSCDRAGRAKRTDSLQAWKRVLH*NQVGLW
Trigger: CCAAAGTCCAACTTGGTTTCAGTGCAGTACCCTTTT...CCAAGCCTGGAGCGAATCCGTCCTCTTGGCTCTCCCAGCCCTATCACAGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp AGCTCCTTCCAGCTAGAAGCACATGGGACTGCTTCTAGGATGGAAACAAGTCCTATACACAAGCACACCTaGCACAGGCTGGCACGCCTC +
Preference number: 4 (lower is better)
Translates to: SSFQLEAHGTASRMETSPIHKHT*HRLARL
Trigger: GAGGCGTGCCAGCCTGTGTCAGGTGTGCTTGTGTAT...AGGACTTGTTTCCATCCTAGAAGCAGTCCCATGTGCTTCTAGCTGGAAGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp GACTGCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGCCAACTACACCTGGTaGGCCTCAGAGGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: DCKVPGFCCTFAHAHGWWANYTW*ASEGQK
Trigger: TTTCTGTCCCTCTGAGGCTCACCAGGTGTAGTTGGC...CCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR GCA 90 bp CCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAACAAGGGCGAAAGGAAAGGATTAGCTTGGCAGCACTaGTCTCAAATTGTGATGCTC +
Preference number: 4 (lower is better)
Translates to: PALGQDEGNVGNKGERKGLAWQH*SQIVML
Trigger: GAGCATCACAATTTGAGAGCAGTGCTGCCAAGCTAA...TCCTTTCCTTTCGCCCTTGTTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR GCA 90 bp GAAAGTAGAAGGGCTAATACCCCCAAAGAACAAGGCCAACTACACCTGGTGAGCGAAATCCCTTGTCTCTaGCCTTCCCCCGTCCCGAAC +
Preference number: 4 (lower is better)
Translates to: ESRRANTPKEQGQLHLVSEIPCL*PSPVPN
Trigger: GTTCGGGACGGGGGAAGGGCAGAGACAAGGGATTTC...GCTCACCAGGTGTAGTTGGCCTTGTTCTTTGGGGGTATTAGCCCTTCTACTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361716.8
CDS-3UTR GCA 90 bp ACCCCCAAAGAACAAGGCCAACTACACCTGGTGAGCCTCAGAGGGACAGAAACCTGGGAGGGTACTGACTaGTTTCTTCCAGCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: TPKEQGQLHLVSLRGTETWEGTD*FLPALQ
Trigger: CTGAAGAGCTGGAAGAAAGCAGTCAGTACCCTCCCA...GGTTTCTGTCCCTCTGAGGCTCACCAGGTGTAGTTGGCCTTGTTCTTTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR GCA 90 bp AAGGGCGAAAGGAAAGGAAGGATGGTTTTGAGCAATGAAATGCTGCTGCATGGACCAGCGGTGACCCCCTaGATTAGGCAAGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: KGERKGRMVLSNEMLLHGPAVTP*IRQGGA
Trigger: GGCTCCTCCTTGCCTAATGCAGGGGGTCACCGCTGG...TCCATGCAGCAGCATTTCATTGCTCAAAACCATCCTTCCTTTCCTTTCGCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR GCA 90 bp TGGGTCTACATGACTTCTCTGCATCCTGAGGATCGGCCGGGCCCCAGGAAGAACGTCCCAGGGTTTTGTTaGACATTTGCTCATGCACAT +
Preference number: 4 (lower is better)
Translates to: WVYMTSLHPEDRPGPRKNVPGFC*TFAHAH
Trigger: ATGTGCATGAGCAAATGTGCAACAAAACCCTGGGAC...GTTCTTCCTGGGGCCCGGCCGATCCTCAGGATGCAGAGAAGTCATGTAGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp TTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAATTCTCCTCCCAAGTCTaGGCAGCTTCATGGGTACTT +
Preference number: 4 (lower is better)
Translates to: FLPALQSRPWAGRRECGKFSSQV*AASWVL
Trigger: AAGTACCCATGAAGCTGCCCAGACTTGGGAGGAGAA...TTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp CCCCAAAGAACAAGGCCAACTACACCTGGTGAGCCTCAGAGGGACAGAAACCCACCTAGCTCCTACCAGTaGCCAGGTTTTCTAGAAGTC +
Preference number: 4 (lower is better)
Translates to: PQRTRPTTPGEPQRDRNPPSSYQ*PGFLEV
Trigger: GACTTCTAGAAAACCTGGCCACTGGTAGGAGCTAGG...TGGGTTTCTGTCCCTCTGAGGCTCACCAGGTGTAGTTGGCCTTGTTCTTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp AGGGGGATAGCAGAGACACACAGAAGAGGGTACAGGGTGGGTGAGAAAGAAAGTCCTCATCCCTGTCTTTaGCAAGTGCACGGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: RGIAETHRRGYRVGEKESPHPCL*QVHGWC
Trigger: ACACCACCCGTGCACTTGCCAAAGACAGGGATGAGG...ACTTTCTTTCTCACCCACCCTGTACCCTCTTCTGTGTGTCTCTGCTATCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp CCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGGGAAGCTCAGCTTCATTCCAAGGTGGGGCTGGTaGGTCTACATGACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PHRLMANRRTGCGKLSFIPRWGW*VYMTSL
Trigger: CAGAGAAGTCATGTAGACCCACCAGCCCCACCTTGG...AATGAAGCTGAGCTTCCCACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp GAAAAGGGTACTGCACTGAAACCAAGTTGGACTTTGGTCCACCCCCAGGACCCTGCCTCTTCCTGTTCGTaGACCGAGGGAAGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: EKGTALKPSWTLVHPQDPASSCS*TEGRRN
Trigger: ATTCCTTCTTCCCTCGGTCCACGAACAGGAAGAGGC...AGGGTCCTGGGGGTGGACCAAAGTCCAACTTGGTTTCAGTGCAGTACCCTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp GGTTTTCTAGAAGTCACCATGGGCACCGATACTCTTCTCCTCCCAAGTCTGGGCACACATCGAGGACAGTaGTGGTTCTTCTCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: GFLEVTMGTDTLLLPSLGTHRGQ*WFFSSG
Trigger: ACCGCTGGAGAAGAACCACCACTGTCCTCGATGTGT...GCCCAGACTTGGGAGGAGAAGAGTATCGGTGCCCATGGTGACTTCTAGAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp GACTGCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGCTCATGCACATGGGTaGTGGGAGGAAAGGGGGATA +
Preference number: 4 (lower is better)
Translates to: DCKVPGFCCTFAHAHGWWAHAHG*WEERGI
Trigger: TATCCCCCTTTCCTCCCACCACCCATGTGCATGAGC...CCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp CCCCAAAGAACAAGGCCAACTACACCTGGTGAGCCTCAGAGGGACAGAAACCCACCGAAGAACGGGATGTaGGAAGCTCAGCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: PQRTRPTTPGEPQRDRNPPKNGM*EAQLHL
Trigger: CAAATGAAGCTGAGCTTCCCACATCCCGTTCTTCGG...TGGGTTTCTGTCCCTCTGAGGCTCACCAGGTGTAGTTGGCCTTGTTCTTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR TCA 90 bp GACTGCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGACTGCTCTCAAATTGTaGTGCTCCTGCCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: DCKVPGFCCTFAHAHGWWTALKL*CSCLQG
Trigger: GCCTTGCAGGCAGGAGCATCACAATTTGAGAGCAGT...CCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR TCA 90 bp CACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGGGAAATTAATAGCCCATCCTaGAGCTCAGCAATTGCCCCG +
Preference number: 4 (lower is better)
Translates to: HSGNPTSSHGKPKNGMWEINSPS*SSAIAP
Trigger: CGGGGCAATTGCTGAGCTTCAGGATGGGCTATTAAT...TTCCCACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp GTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGGATGGTTTTGAGCAATaGAATGCTGCTGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: VLTAFFQLFSPALGQDEGDGFEQ*NAAAWK
Trigger: TTTCCATGCAGCAGCATTTCATTGCTCAAAACCATC...CCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR TCA 90 bp TGGGAGGGTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGAGATGGTTTTGAGCAATaGAATGCTGCTGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: WEGTDCFLPALQSRPWAGDGFEQ*NAAAWK
Trigger: TTTCCATGCAGCAGCATTTCATTGCTCAAAACCATC...TCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTACCCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR TCA 90 bp TTGGGACACATCGAGGACAGTGGTGGTTCTTCTCCAGCGGTGACCCCCTGCATTAAGGAAGGATGGTTTTaGGCAATGAAATGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LGHIEDSGGSSPAVTPCIKEGWF*AMKCCC
Trigger: GCAGCAGCATTTCATTGCTCAAAACCATCCTTCCTT...AATGCAGGGGGTCACCGCTGGAGAAGAACCACCACTGTCCTCGATGTGTCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR GCA 90 bp GAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGGGAAGCTCAGCGCAATGAAATGCTGCTaGATGGAAAGTGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: ETPHRLMANRRTGCGKLSAMKCC*MESGHP
Trigger: TGGATGCCCACTTTCCATGCAGCAGCATTTCATTGC...GCTGAGCTTCCCACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp CACATCGAGGACAGTGGTGGTTCTTCTCCAGCGGTGACCCCCTGCATTAGGCAAGTCCCAGGGTTTTGTTaGACATTTGCTCATGCACAT +
Preference number: 4 (lower is better)
Translates to: HIEDSGGSSPAVTPCIRQVPGFC*TFAHAH
Trigger: ATGTGCATGAGCAAATGTGCAACAAAACCCTGGGAC...TTGCCTAATGCAGGGGGTCACCGCTGGAGAAGAACCACCACTGTCCTCGATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR GCA 90 bp TGGGAGGGTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGATCAGCTTCATTTGACTaGAAAGTCCCAGGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: WEGTDCFLPALQSRPWAGSASFD*KVPGFC
Trigger: ACAAAACCCTGGGACTTTGCAGTCAAATGAAGCTGA...TCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTACCCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp TGGGAGAGCCAAGAGGACGGATTCGCTCCAGGCTTGGGACACATCGAGGACAGTGGTAAATATGCCACATaGCTTTGGTGGAAGTACAAC +
Preference number: 4 (lower is better)
Translates to: WESQEDGFAPGLGHIEDSGKYAT*LWWKYN
Trigger: GTTGTACTTCCACCAAAGGCATGTGGCATATTTACC...ACTGTCCTCGATGTGTCCCAAGCCTGGAGCGAATCCGTCCTCTTGGCTCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp CTCCTACCAGTGGCCAGGTTTTCTAGAAGTCACCATGGGCACCGATACTCTTCTTCCTCCACTTGTGCCTaGGTTTGCTGTAGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: LLPVARFSRSHHGHRYSSSSTCA*VCCSRL
Trigger: CAGACGACTACAGCAAACCCAGGCACAAGTGGAGGA...AGAAGAGTATCGGTGCCCATGGTGACTTCTAGAAAACCTGGCCACTGGTAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp GGGATGTGGGAAGCTCAGCTTCATTTGACTGCAAAGTCCCAGGGTTTTGTTGCATGGAATGGAGGACGGTaGGTGGGGAAGTGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: GMWEAQLHLTAKSQGFVAWNGGR*VGKCVE
Trigger: CTCAACACACTTCCCCACCCACCGTCCTCCATTCCA...TGCAACAAAACCCTGGGACTTTGCAGTCAAATGAAGCTGAGCTTCCCACATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp GTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGAGGAAAGGAGGAATAAAGGGCCATaGGCATTCTCCGCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: VPGFCCTFAHAHGWWEERRNKGP*AFSALF
Trigger: GAACAGAGCGGAGAATGCCCATGGCCCTTTATTCCT...CCTTTCCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp TTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGAGGAAAGGGGGATAGCAGCTCATGCACATGGGTaGTGGGAGGAAAGGGGGATA +
Preference number: 4 (lower is better)
Translates to: FCCTFAHAHGWWEERGIAAHAHG*WEERGI
Trigger: TATCCCCCTTTCCTCCCACCACCCATGTGCATGAGC...TGCTATCCCCCTTTCCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp CAAAGAGGTGATGACAGACACACAGTGGAAACCCCACATCGTCTCATGGCAAACGCTCATGCACATGGGTaGTGGGAGGAAAGGGGGATA +
Preference number: 4 (lower is better)
Translates to: QRGDDRHTVETPHRLMANAHAHG*WEERGI
Trigger: TATCCCCCTTTCCTCCCACCACCCATGTGCATGAGC...GTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTCTGTCATCACCTCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp CCTCATCCCTGTCTTTGGCAAGTGCACGGGTGGTGTGGAGGAAAGGATTCCATGATGACAGACACACAGTaGAAACCCCACATCGTCTCA +
Preference number: 4 (lower is better)
Translates to: PHPCLWQVHGWCGGKDSMMTDTQ*KPHIVS
Trigger: TGAGACGATGTGGGGTTTCCACTGTGTGTCTGTCAT...CATGGAATCCTTTCCTCCACACCACCCGTGCACTTGCCAAAGACAGGGATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp ATGGTTTTGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCAGACCCTGCACTGCTCTCAAATTGTaGTGCTCCTGCCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: MVLSNEMLLHGKWASRPCTALKL*CSCLQG
Trigger: GCCTTGCAGGCAGGAGCATCACAATTTGAGAGCAGT...GCAGGGTCTGGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR TCA 90 bp AGGATGGTTTTGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCAGACCCACTGCTCTCAAATTGTaGTGCTCCTGCCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: RMVLSNEMLLHGKWASRPTALKL*CSCLQG
Trigger: GCCTTGCAGGCAGGAGCATCACAATTTGAGAGCAGT...GGGTCTGGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAACCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR TCA 90 bp TTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAAAAGGAAGGATGGTTTTaGGCAATGAAATGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FLPALQSRPWAGRRECGKKEGWF*AMKCCC
Trigger: GCAGCAGCATTTCATTGCTCAAAACCATCCTTCCTT...TTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR GCA 90 bp AAGGGCGAAAGGAAAGGAAGGATGGTTTTGAGCAATGAAATGCTGCTGCATGGACTCCCTGCAATGCGTTaGAGGGGGAAGGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: KGERKGRMVLSNEMLLHGLPAMR*RGKACP
Trigger: TGGACAAGCCTTCCCCCTGCAACGCATTGCAGGGAG...TCCATGCAGCAGCATTTCATTGCTCAAAACCATCCTTCCTTTCCTTTCGCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361716.8
CDS-3UTR GCA 90 bp AGCTCCTTCCAGCTAGAAGCACATGGGACTGCTTCTAGGATGGAAACAAGTCCTCTCTCCATTGTTAAGTaGCCCATCCCCATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SSFQLEAHGTASRMETSPLSIVK*PIPMVS
Trigger: GGAGACCATGGGGATGGGGCACTTAACAATGGAGAG...AGGACTTGTTTCCATCCTAGAAGCAGTCCCATGTGCTTCTAGCTGGAAGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361716.8
CDS-3UTR GCA 90 bp AGCTCCTTCCAGCTAGAAGCACATGGGACTGCTTCTAGGATGGAAACAAGTCCTCTGAAGCTCAGCAATTaGCCCGAAGATAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SSFQLEAHGTASRMETSPLKLSN*PEDRLS
Trigger: GCTCAGCCTATCTTCGGGGCAATTGCTGAGCTTCAG...AGGACTTGTTTCCATCCTAGAAGCAGTCCCATGTGCTTCTAGCTGGAAGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp TTGGGACACATCGAGGACAGTGGTGGTTCTTCTCCAGCGGTGACCCCCTGCATTTCAGCTTCATTTGACTaGAAAGTCCCAGGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LGHIEDSGGSSPAVTPCISASFD*KVPGFC
Trigger: ACAAAACCCTGGGACTTTGCAGTCAAATGAAGCTGA...AATGCAGGGGGTCACCGCTGGAGAAGAACCACCACTGTCCTCGATGTGTCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp TGTTCAGAATACATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGTACAAGGGGGACCCCCACCTaGGGCAGTCCCTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: CSEYMTLVNMPHAFGGSTRGTPT*GSPFCP
Trigger: GGGACAGAAGGGACTGCCCCAGGTGGGGGTCCCCCT...TGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTATTCTGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp GCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCAGACCCTGCCCAGCATGGCACTTCCTCTTTAGCTTaGCAGCACTGCTCTCAAATT +
Preference number: 4 (lower is better)
Translates to: AMKCCCMESGHPDPAQHGTSSLA*QHCSQI
Trigger: AATTTGAGAGCAGTGCTGCCAAGCTAAAGAGGAAGT...GCCATGCTGGGCAGGGTCTGGATGCCCACTTTCCATGCAGCAGCATTTCATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CCA 90 bp CAGACACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGGGACATGAATGTGGATaGCAATGGACAACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: QTHSGNPTSSHGKPKNGMGHECG*QWTTGK
Trigger: CTTCCCTGTTGTCCATTGCCATCCACATTCATGTCC...CATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp TTGACTGCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTATGGAGGACGGTGGGTaGGGAAGTGTGTTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LTAKSQGFVAHLLMHMGGMEDGG*GSVLRE
Trigger: CTCTCTCAACACACTTCCCCACCCACCGTCCTCCAT...ACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGCAGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp AAAGGAAGGATGGTTTTGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCGTCTGGGCAGCTTCATaGGTACTTCGCCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: KGRMVLSNEMLLHGKWASVWAAS*VLRLSH
Trigger: GTGGCTGAGGCGAAGTACCCATGAAGCTGCCCAGAC...GGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAACCATCCTTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp AGCTCCTTCCAGCTAGAAGCACATGGGACTGCTTCTAGGATGGAAACAAGTCCTGCACTGAAACCAAGTTaGACTTTGGTCCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: SSFQLEAHGTASRMETSPALKPS*TLVHPQ
Trigger: CTGGGGGTGGACCAAAGTCCAACTTGGTTTCAGTGC...AGGACTTGTTTCCATCCTAGAAGCAGTCCCATGTGCTTCTAGCTGGAAGGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp TTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAAGAGGAAAGGATTCCATaGGTGTCCAAAGATCTCACA +
Preference number: 4 (lower is better)
Translates to: FLPALQSRPWAGRRECGKEERIP*VSKDLT
Trigger: TGTGAGATCTTTGGACACCCATGGAATCCTTTCCTC...TTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp CCAGGAATGATTCCTGTGATAGGGCTGGGAGAGCCAAGAGGACGGATTCGCTCCTCAGACAGGAAAGGGTaGTTCAAAGGGGAATATACT +
Preference number: 4 (lower is better)
Translates to: PGMIPVIGLGEPRGRIRSSDRKG*FKGEYT
Trigger: AGTATATTCCCCTTTGAACCACCCTTTCCTGTCTGA...GGAGCGAATCCGTCCTCTTGGCTCTCCCAGCCCTATCACAGGAATCATTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp GACACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGATGACAGACACACAGTaGAAACCCCACATCGTCTCA +
Preference number: 4 (lower is better)
Translates to: DTQWKPHIVSWQTEERDVMTDTQ*KPHIVS
Trigger: TGAGACGATGTGGGGTTTCCACTGTGTGTCTGTCAT...CACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR CAA 72 bp CATTTGACTGCAAAGTCCCAGGGTTTTGTTGCACATTaGCTCATGCACATGGGTGGTGGGAGGAAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: HLTAKSQGFVAH*LMHMGGGRKGG
Trigger: TCCCCCTTTCCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGCAGTCAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR TCA 90 bp TTCCAGCTAGAAGCACATGGGACTGCTTCTAGGATGGAAACAAGTCCTGCTATTCCACGTTCACACGTATaGTGTCCACCACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: FQLEAHGTASRMETSPAIPRSHV*CPPPPP
Trigger: TGGAGGAGGTGGTGGACATCATACGTGTGAACGTGG...AATAGCAGGACTTGTTTCCATCCTAGAAGCAGTCCCATGTGCTTCTAGCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp AAGGGCGAAAGGAAAGGAAGGATGGTTTTGAGCAATGAAATGCTGCTGCATGGACCACGTTCACACGTATaGTGTCCACCACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KGERKGRMVLSNEMLLHGPRSHV*CPPPPP
Trigger: TGGAGGAGGTGGTGGACATCATACGTGTGAACGTGG...TCCATGCAGCAGCATTTCATTGCTCAAAACCATCCTTCCTTTCCTTTCGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR TCA 90 bp GCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGAGGAGATGGCTCCCAGCATaGTCATCATCTTGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: AKSQGFVAHLLMHMGGGRRWLPA*SSSCSF
Trigger: AAAACTGCAAGATGATGATCATGCTGGGAGCCATCT...CCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR TCA 90 bp GGAAGGATGGTTTTGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCAGAAGAGGGCAGAGGACATaGATGTGGATGGCAATGGAC +
Preference number: 4 (lower is better)
Translates to: GRMVLSNEMLLHGKWASRRGQRT*MWMAMD
Trigger: GTCCATTGCCATCCACATTCATGTCCTCTGCCCTCT...TCTGGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAACCATCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp GACACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGTTAGCTTGGCAGCACTaGTCTCAAATTGTGATGCTC +
Preference number: 4 (lower is better)
Translates to: DTQWKPHIVSWQTEERDVLAWQH*SQIVML
Trigger: GAGCATCACAATTTGAGAGCAGTGCTGCCAAGCTAA...CACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR GCA 90 bp CCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAACAAGGGCGAAAGGAAAGGATATACACACAAACCATaGAAAGAGGAGGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: PALGQDEGNVGNKGERKGYTHKP*KEEEEK
Trigger: TTTCTCTTCCTCCTCTTTGCATGGTTTGTGTGTATA...TCCTTTCCTTTCGCCCTTGTTTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp GCTTCTAGGATGGAAACAAGTCCTGCTATTTTCACAATCCCTAAGTGTTCTCCACTGCCCTCCTCCCCTTaGACCTGGGCTTATCCCACA +
Preference number: 4 (lower is better)
Translates to: ASRMETSPAIFTIPKCSPLPSSP*TWAYPT
Trigger: TGTGGGATAAGCCCAGGTGCAAGGGGAGGAGGGCAG...TGGAGAACACTTAGGGATTGTGAAAATAGCAGGACTTGTTTCCATCCTAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp GAACGGGATGTGGGAAGCTCAGCTTCATTTGACTGCAAAGTCCCAGGGTTTTGTTGGGAGGGTACTGACTaGTTTCTTCCAGCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ERDVGSSASFDCKVPGFCWEGTD*FLPALQ
Trigger: CTGAAGAGCTGGAAGAAAGCAGTCAGTACCCTCCCA...ACAAAACCCTGGGACTTTGCAGTCAAATGAAGCTGAGCTTCCCACATCCCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR GCA 90 bp AGGATGGTTTTGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCAGACCCTGGGAGGGTACTGACTaGTTTCTTCCAGCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RMVLSNEMLLHGKWASRPWEGTD*FLPALQ
Trigger: CTGAAGAGCTGGAAGAAAGCAGTCAGTACCCTCCCA...GGGTCTGGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAACCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR GCA 90 bp GTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGAGGAAAGGGTTTTGTTGCACATTTaGTCATGCACATGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VPGFCCTFAHAHGWWEERVLLHI*SCTWVV
Trigger: CACCACCCATGTGCATGAGCAAATGTGCAACAAAAC...CCTTTCCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR GCA 90 bp CAGACACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGGTCCCAGGGTTTTGTTaGACATTTGCTCATGCACAT +
Preference number: 4 (lower is better)
Translates to: QTHSGNPTSSHGKPKNGMVPGFC*TFAHAH
Trigger: ATGTGCATGAGCAAATGTGCAACAAAACCCTGGGAC...CATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR GCA 90 bp GGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGGGAAGCTCAGTCAGCTTCATTTGACTaGAAAGTCCCAGGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: GNPTSSHGKPKNGMWEAQSASFD*KVPGFC
Trigger: ACAAAACCCTGGGACTTTGCAGTCAAATGAAGCTGA...CTGAGCTTCCCACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp TTGACTGCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTTCCTCCACTTGTGCCTaGGTTTGCTGTAGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: LTAKSQGFVAHLLMHMGGSSTCA*VCCSRL
Trigger: CAGACGACTACAGCAAACCCAGGCACAAGTGGAGGA...ACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGCAGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp GAGGTGATGACAGACACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAAACTCTTTGGGGCTTTaGGGGAACTTGAGAGTACAG +
Preference number: 4 (lower is better)
Translates to: EVMTDTQWKPHIVSWQTENSLGL*GNLRVQ
Trigger: CTGTACTCTCAAGTTCCCCCAAAGCCCCAAAGAGTT...TTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTCTGTCATCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp CACATCGAGGACAGTGGTGGTTCTTCTCCAGCGGTGACCCCCTGCATTAGGCAAAAACTACCAGCTAGATaGATTTATTTGGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: HIEDSGGSSPAVTPCIRQKLPAR*IYLVPS
Trigger: TGAGGGCACCAAATAAATCCATCTAGCTGGTAGTTT...TTGCCTAATGCAGGGGGTCACCGCTGGAGAAGAACCACCACTGTCCTCGATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp AAAGGAAGGATGGTTTTGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCAGTGCACGGGTGGTGTaGAGGAAAGGATTCCATGGG +
Preference number: 4 (lower is better)
Translates to: KGRMVLSNEMLLHGKWASSARVV*RKGFHG
Trigger: CCCATGGAATCCTTTCCTCCACACCACCCGTGCACT...GGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAACCATCCTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp TGGGAAGCTCAGCTTCATTTGACTGCAAAGTCCCAGGGTTTTGTTGCACATTTGTGGCAAGTGCACGGGTaGTGTGGAGGAAAGGATTCC +
Preference number: 4 (lower is better)
Translates to: WEAQLHLTAKSQGFVAHLWQVHG*CGGKDS
Trigger: GGAATCCTTTCCTCCACACCACCCGTGCACTTGCCA...CAAATGTGCAACAAAACCCTGGGACTTTGCAGTCAAATGAAGCTGAGCTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp AAAGGAAGGATGGTTTTGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCCATCGAGGACAGTGGTaGTTCTTCTCCAGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: KGRMVLSNEMLLHGKWASHRGQW*FFSSGD
Trigger: GTCACCGCTGGAGAAGAACCACCACTGTCCTCGATG...GGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAACCATCCTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR TCA 90 bp GATCCCATCCTCAGGTTCCACTGTCTATACACACAAACCATGCAAAGAGGAGGAGGCTTTGGGGGAACTTaGGAGTACAGAAAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: DPILRFHCLYTQTMQRGGGFGGT*EYRKSR
Trigger: CCTGCTTTTTCTGTACTCTCAAGTTCCCCCAAAGCC...TCCTCCTCTTTGCATGGTTTGTGTGTATAGACAGTGGAACCTGAGGATGGGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp GAAAAGGGTACTGCACTGAAACCAAGTTGGACTTTGGTCCACCCCCAGGACCCTGATGGTTTTGAGCAATaGAATGCTGCTGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: EKGTALKPSWTLVHPQDPDGFEQ*NAAAWK
Trigger: TTTCCATGCAGCAGCATTTCATTGCTCAAAACCATC...AGGGTCCTGGGGGTGGACCAAAGTCCAACTTGGTTTCAGTGCAGTACCCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp GACTGCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGAAGGAAGGATGGTTTTaGGCAATGAAATGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DCKVPGFCCTFAHAHGWWKEGWF*AMKCCC
Trigger: GCAGCAGCATTTCATTGCTCAAAACCATCCTTCCTT...CCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp TTGGACTTTGGTCCACCCCCAGGACCCTCTTCAGGCCTGGTCCAGGAAGGAAAGTGCCCTCATACAGAATaGTGTAGAAAATGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: LDFGPPPGPSSGLVQEGKCPHTE*CRKCKE
Trigger: TTCTTTACATTTTCTACAGCATTCTGTATGAGGGCA...CTTTCCTTCCTGGACCAGGCCTGAAGAGGGTCCTGGGGGTGGACCAAAGTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp GCCTTTGGTGGAAGTACAACTGTTGTTATTACTCTATACAAGTATGAGATCAGGTGGGCATCCAGACCCTaGCCAGCATGGCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: AFGGSTTVVITLYKYEIRWASRP*PAWPQP
Trigger: AGGCTGAGGCCATGCTGGGCAGGGTCTGGATGCCCA...CCTGATCTCATACTTGTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp GCTTCTAGGATGGAAACAAGTCCTGCTATTTTCACAATCCCTAAGTGTTCTCCACTGCTGCATGGAAAGTaGGCATCCAGACCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ASRMETSPAIFTIPKCSPLLHGK*ASRPCP
Trigger: TGGGCAGGGTCTGGATGCCCACTTTCCATGCAGCAG...TGGAGAACACTTAGGGATTGTGAAAATAGCAGGACTTGTTTCCATCCTAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp GATCCCATCCTCAGGTTCCACTGTCTATACACACAAACCATGCAAAGAGGAGGACCGAAGAACGGGATGTaGGAAGCTCAGCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: DPILRFHCLYTQTMQRGGPKNGM*EAQLHL
Trigger: CAAATGAAGCTGAGCTTCCCACATCCCGTTCTTCGG...TCCTCCTCTTTGCATGGTTTGTGTGTATAGACAGTGGAACCTGAGGATGGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp AAAGGAAGGATGGTTTTGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCATTAATAGCCCATCCTaGAGCTCAGCAATTGCCCCG +
Preference number: 4 (lower is better)
Translates to: KGRMVLSNEMLLHGKWASINSPS*SSAIAP
Trigger: CGGGGCAATTGCTGAGCTTCAGGATGGGCTATTAAT...GGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAACCATCCTTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp ATGCCTTTGGTGGAAGTACAACTGTTGTTATTACTCTATACAAGTATGAGATCATTCCTCTCCGGAGGCTaGGGCGAGACACCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: MPLVEVQLLLLLYTSMRSFLSGG*GETPGE
Trigger: CTCACCGGGTGTCTCGCCGCAGCCTCCGGAGAGGAA...TGATCTCATACTTGTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR GCA 90 bp GACACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGCAATCTCTCTCTTTATaGCAACAATTAACTGGGAGC +
Preference number: 4 (lower is better)
Translates to: DTQWKPHIVSWQTEERDVQSLSL*QQLTGS
Trigger: GCTCCCAGTTAATTGTTGGCATAAAGAGAGAGATTG...CACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp AGCAGCATTTCTAGTGTTGAGGGACAGAGTGCAAATGAACGCAACGAAAAAGGACTGAAGCTCAGCAATTaGCCCGAAGATAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SSISSVEGQSANERNEKGLKLSN*PEDRLS
Trigger: GCTCAGCCTATCTTCGGGGCAATTGCTGAGCTTCAG...TCCTTTTTCGTTGCGTTCATTTGCACTCTGTCCCTCAACACTAGAAATGCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp TTTTTGCCTTTGTTCAGAATACATGACATTGGTAAATATGCCACATGCCTTTGGCCAGCGGTGACCCCCTaGATTAGGCAAGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: FLPLFRIHDIGKYATCLWPAVTP*IRQGGA
Trigger: GGCTCCTCCTTGCCTAATGCAGGGGGTCACCGCTGG...CCAAAGGCATGTGGCATATTTACCAATGTCATGTATTCTGAACAAAGGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR GCA 90 bp GACTGCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGGTAAATATGCCACATaGCTTTGGTGGAAGTACAAC +
Preference number: 4 (lower is better)
Translates to: DCKVPGFCCTFAHAHGWWGKYAT*LWWKYN
Trigger: GTTGTACTTCCACCAAAGGCATGTGGCATATTTACC...CCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp GCCTTTGGTGGAAGTACAACTGTTGTTATTACTCTATACAAGTATGAGATCAGGACGCTGCGGCTGAAGTaGACGGAACTGCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: AFGGSTTVVITLYKYEIRTLRLK*TELPSS
Trigger: GGAGCTTGGCAGTTCCGTCCACTTCAGCCGCAGCGT...CCTGATCTCATACTTGTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp GTTCTCCAGGCCTCTGGAGAACAAAGTAAAGTTGTAAGATCCCCAAAGACACGGAACTCTTTGGGGCTTTaGGGGAACTTGAGAGTACAG +
Preference number: 4 (lower is better)
Translates to: VLQASGEQSKVVRSPKTRNSLGL*GNLRVQ
Trigger: CTGTACTCTCAAGTTCCCCCAAAGCCCCAAAGAGTT...CCGTGTCTTTGGGGATCTTACAACTTTACTTTGTTCTCCAGAGGCCTGGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp GTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGAGGAAAGGCTAGATGGATTTATTTaGTGCCCTCATACAGAATGC +
Preference number: 4 (lower is better)
Translates to: VPGFCCTFAHAHGWWEERLDGFI*CPHTEC
Trigger: GCATTCTGTATGAGGGCACCAAATAAATCCATCTAG...CCTTTCCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp GGTTTTCTAGAAGTCACCATGGGCACCGATACTCTTCTCCTCCCAAGTCTGGGCAAACTACCAGCTAGATaGATTTATTTGGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GFLEVTMGTDTLLLPSLGKLPAR*IYLVPS
Trigger: TGAGGGCACCAAATAAATCCATCTAGCTGGTAGTTT...GCCCAGACTTGGGAGGAGAAGAGTATCGGTGCCCATGGTGACTTCTAGAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp CTGCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGATATGCCACATGCCTTTaGTGGAAGTACAACTGTTGT +
Preference number: 4 (lower is better)
Translates to: LQSPRVLLHICSCTWVVGYATCL*WKYNCC
Trigger: ACAACAGTTGTACTTCCACCAAAGGCATGTGGCATA...TCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR TCA 90 bp GCTTCTAGGATGGAAACAAGTCCTGCTATTTTCACAATCCCTAAGTGTTCTCCAACTGCTCTCAAATTGTaGTGCTCCTGCCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: ASRMETSPAIFTIPKCSPTALKL*CSCLQG
Trigger: GCCTTGCAGGCAGGAGCATCACAATTTGAGAGCAGT...TGGAGAACACTTAGGGATTGTGAAAATAGCAGGACTTGTTTCCATCCTAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp GTTTTGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCAGACCCTGCCCAGATGGATTTATTTGGTaGCCTCATACAGAATGCTGT +
Preference number: 4 (lower is better)
Translates to: VLSNEMLLHGKWASRPCPDGFIW*PHTECC
Trigger: ACAGCATTCTGTATGAGGGCACCAAATAAATCCATC...TGGGCAGGGTCTGGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp CCTTTGTTCAGAATACATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGAACCAAGTTGGACTTTaGTCCACCCCCAGGACCCTC +
Preference number: 4 (lower is better)
Translates to: PLFRIHDIGKYATCLWWKNQVGL*STPRTL
Trigger: GAGGGTCCTGGGGGTGGACCAAAGTCCAACTTGGTT...CTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTATTCTGAACAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp TTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGAGGAAAGGGGGATAGCATCAGACAGGAAAGGGTaGTTCAAAGGGGAATATACT +
Preference number: 4 (lower is better)
Translates to: FCCTFAHAHGWWEERGIASDRKG*FKGEYT
Trigger: AGTATATTCCCCTTTGAACCACCCTTTCCTGTCTGA...TGCTATCCCCCTTTCCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp TTCCAGCTAGAAGCACATGGGACTGCTTCTAGGATGGAAACAAGTCCTGCTATTTCCTCCCCTTGCACCTaGGCTTATCCCACATTAATA +
Preference number: 4 (lower is better)
Translates to: FQLEAHGTASRMETSPAISSPCT*AYPTLI
Trigger: TATTAATGTGGGATAAGCCCAGGTGCAAGGGGAGGA...AATAGCAGGACTTGTTTCCATCCTAGAAGCAGTCCCATGTGCTTCTAGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp CCTTTGTTCAGAATACATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGCATCGAGGACAGTGGTaGTTCTTCTCCAGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: PLFRIHDIGKYATCLWWKHRGQW*FFSSGD
Trigger: GTCACCGCTGGAGAAGAACCACCACTGTCCTCGATG...CTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTATTCTGAACAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
3UTR CAA 72 bp AAACCGAAGAACGGGATGTGGGAAGCTCAGCTTCATTaGACTGCAAAGTCCCAGGGTTTTGTTGCACATTTG +
Preference number: 4 (lower is better)
Translates to: KPKNGMWEAQLH*TAKSQGFVAHL
Trigger: CAAATGTGCAACAAAACCCTGGGACTTTGCAGTCAAATGAAGCTGAGCTTCCCACATCCCGTTCTTCGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR TCA 90 bp GCCTTTGGTGGAAGTACAACTGTTGTTATTACTCTATACAAGTATGAGATCAGGCCACGTTCACACGTATaGTGTCCACCACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AFGGSTTVVITLYKYEIRPRSHV*CPPPPP
Trigger: TGGAGGAGGTGGTGGACATCATACGTGTGAACGTGG...CCTGATCTCATACTTGTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR TCA 90 bp TGTTCAGAATACATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGTACAATGACCAGGCAGTACTaGGTGAGCTGCCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: CSEYMTLVNMPHAFGGSTMTRQY*VSCHLP
Trigger: GGGAAGATGGCAGCTCACTCAGTACTGCCTGGTCAT...TGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTATTCTGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp TGTTCAGAATACATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGTACAGCTGGTGGGTCTACATaGCTTCTCTGCATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: CSEYMTLVNMPHAFGGSTAGGST*LLCILR
Trigger: CCTCAGGATGCAGAGAAGTCATGTAGACCCACCAGC...TGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTATTCTGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp TACATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGTACAACTGTTGTTGCTGGTGGGTCTACATaGCTTCTCTGCATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: YMTLVNMPHAFGGSTTVVAGGST*LLCILR
Trigger: CCTCAGGATGCAGAGAAGTCATGTAGACCCACCAGC...AACAACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp AAAGGAAGGATGGTTTTGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCTTAGCTTGGCAGCACTaGTCTCAAATTGTGATGCTC +
Preference number: 4 (lower is better)
Translates to: KGRMVLSNEMLLHGKWASLAWQH*SQIVML
Trigger: GAGCATCACAATTTGAGAGCAGTGCTGCCAAGCTAA...GGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAACCATCCTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR GCA 90 bp TTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGAGGAAAGGGGGATAGCAGATGGATTTATTTGGTaGCCTCATACAGAATGCTGT +
Preference number: 4 (lower is better)
Translates to: FCCTFAHAHGWWEERGIADGFIW*PHTECC
Trigger: ACAGCATTCTGTATGAGGGCACCAAATAAATCCATC...TGCTATCCCCCTTTCCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp GATCCCATCCTCAGGTTCCACTGTCTATACACACAAACCATGCAAAGAGGAGGAACTTCCTCTTTAGCTTaGCAGCACTGCTCTCAAATT +
Preference number: 4 (lower is better)
Translates to: DPILRFHCLYTQTMQRGGTSSLA*QHCSQI
Trigger: AATTTGAGAGCAGTGCTGCCAAGCTAAAGAGGAAGT...TCCTCCTCTTTGCATGGTTTGTGTGTATAGACAGTGGAACCTGAGGATGGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp GTTCTCCAGGCCTCTGGAGAACAAAGTAAAGTTGTAAGATCCCCAAAGACACGGACTTCCTCTTTAGCTTaGCAGCACTGCTCTCAAATT +
Preference number: 4 (lower is better)
Translates to: VLQASGEQSKVVRSPKTRTSSLA*QHCSQI
Trigger: AATTTGAGAGCAGTGCTGCCAAGCTAAAGAGGAAGT...CCGTGTCTTTGGGGATCTTACAACTTTACTTTGTTCTCCAGAGGCCTGGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp GCCTTTGGTGGAAGTACAACTGTTGTTATTACTCTATACAAGTATGAGATCAGGGATTCGCTCCAGGCTTaGGACACATCGAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: AFGGSTTVVITLYKYEIRDSLQA*DTSRTV
Trigger: CACTGTCCTCGATGTGTCCCAAGCCTGGAGCGAATC...CCTGATCTCATACTTGTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR TCA 90 bp TTTTTGCCTTTGTTCAGAATACATGACATTGGTAAATATGCCACATGCCTTTGGGCCAACTACACCTGGTaGGCCTCAGAGGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: FLPLFRIHDIGKYATCLWANYTW*ASEGQK
Trigger: TTTCTGTCCCTCTGAGGCTCACCAGGTGTAGTTGGC...CCAAAGGCATGTGGCATATTTACCAATGTCATGTATTCTGAACAAAGGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR GCA 90 bp AGGGGGATAGCAGAGACACACAGAAGAGGGTACAGGGTGGGTGAGAAAGAAAGTTGCCCTCATACAGAATaGTGTAGAAAATGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: RGIAETHRRGYRVGEKESCPHTE*CRKCKE
Trigger: TTCTTTACATTTTCTACAGCATTCTGTATGAGGGCA...ACTTTCTTTCTCACCCACCCTGTACCCTCTTCTGTGTGTCTCTGCTATCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp ATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGTACAACTGTTGTTATTCCTGTCTTTGGCAAGTaGACGGGTGGTGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: MTLVNMPHAFGGSTTVVIPVFGK*TGGVEE
Trigger: TTCCTCCACACCACCCGTGCACTTGCCAAAGACAGG...AATAACAACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp TATGCCACATGCCTTTGGTGGAAGTACAACTGTTGTTATTACTCTATACAAGTATGTCCCTTCAGCAGGTaGCTGAGCTGGAGCAGACAT +
Preference number: 4 (lower is better)
Translates to: YATCLWWKYNCCYYSIQVCPFSR*LSWSRH
Trigger: ATGTCTGCTCCAGCTCAGCCACCTGCTGAAGGGACA...TACTTGTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGCATGTGGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp TTTTTGCCTTTGTTCAGAATACATGACATTGGTAAATATGCCACATGCCTTTGGTGTCCCTTCAGCAGGTaGCTGAGCTGGAGCAGACAT +
Preference number: 4 (lower is better)
Translates to: FLPLFRIHDIGKYATCLWCPFSR*LSWSRH
Trigger: ATGTCTGCTCCAGCTCAGCCACCTGCTGAAGGGACA...CCAAAGGCATGTGGCATATTTACCAATGTCATGTATTCTGAACAAAGGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp GTAAATATGCCACATGCCTTTGGTGGAAGTACAACTGTTGTTATTACTCTATACCATCGAGGACAGTGGTaGTTCTTCTCCAGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: VNMPHAFGGSTTVVITLYHRGQW*FFSSGD
Trigger: GTCACCGCTGGAGAAGAACCACCACTGTCCTCGATG...GTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp TGGGAAGCTCAGCTTCATTTGACTGCAAAGTCCCAGGGTTTTGTTGCACATTTGTATGCCACATGCCTTTaGTGGAAGTACAACTGTTGT +
Preference number: 4 (lower is better)
Translates to: WEAQLHLTAKSQGFVAHLYATCL*WKYNCC
Trigger: ACAACAGTTGTACTTCCACCAAAGGCATGTGGCATA...CAAATGTGCAACAAAACCCTGGGACTTTGCAGTCAAATGAAGCTGAGCTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR TCA 90 bp TTTTTGCCTTTGTTCAGAATACATGACATTGGTAAATATGCCACATGCCTTTGGAGAGGGCAGAGGACATaGATGTGGATGGCAATGGAC +
Preference number: 4 (lower is better)
Translates to: FLPLFRIHDIGKYATCLWRGQRT*MWMAMD
Trigger: GTCCATTGCCATCCACATTCATGTCCTCTGCCCTCT...CCAAAGGCATGTGGCATATTTACCAATGTCATGTATTCTGAACAAAGGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp ATGCCTTTGGTGGAAGTACAACTGTTGTTATTACTCTATACAAGTATGAGATCATGTGATGCTCCTGCCTaGAAGGCATCAGCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: MPLVEVQLLLLLYTSMRSCDAPA*KASARS
Trigger: TGACCGAGCTGATGCCTTGCAGGCAGGAGCATCACA...TGATCTCATACTTGTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR GCA 90 bp AGCAGCATTTCTAGTGTTGAGGGACAGAGTGCAAATGAACGCAACGAAAAAGGATTTCGAAAAGGGTACTaGACTGAAACCAAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: SSISSVEGQSANERNEKGFRKGY*TETKLD
Trigger: GTCCAACTTGGTTTCAGTGCAGTACCCTTTTCGAAA...TCCTTTTTCGTTGCGTTCATTTGCACTCTGTCCCTCAACACTAGAAATGCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp TACATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGTACAACTGTTGTTAGCAGGTGGCTGAGCTaGAGCAGACATTTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: YMTLVNMPHAFGGSTTVVSRWLS*SRHFSD
Trigger: GTCAGAAAAATGTCTGCTCCAGCTCAGCCACCTGCT...AACAACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp ATGCCTTTGGTGGAAGTACAACTGTTGTTATTACTCTATACAAGTATGAGATCAATGGAGGACGGTGGGTaGGGAAGTGTGTTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: MPLVEVQLLLLLYTSMRSMEDGG*GSVLRE
Trigger: CTCTCTCAACACACTTCCCCACCCACCGTCCTCCAT...TGATCTCATACTTGTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp TTTGGTGGAAGTACAACTGTTGTTATTACTCTATACAAGTATGAGATCAGGGTTTGGAATGGAGGACGGTaGGTGGGGAAGTGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: FGGSTTVVITLYKYEIRVWNGGR*VGKCVE
Trigger: CTCAACACACTTCCCCACCCACCGTCCTCCATTCCA...AACCCTGATCTCATACTTGTATAGAGTAATAACAACAGTTGTACTTCCACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp AAAGATCTCACACTGCTAACACCCTCACGCTCCTTCATCAACAGGAAGAGAGGAAGACACGGAAAATCCTaGACGAACAGATTAGAAATA +
Preference number: 4 (lower is better)
Translates to: KDLTLLTPSRSFINRKRGRHGKS*TNRLEI
Trigger: TATTTCTAATCTGTTCGTCCAGGATTTTCCGTGTCT...TCCTCTCTTCCTGTTGATGAAGGAGCGTGAGGGTGTTAGCAGTGTGAGATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp ACTCACTGTTTCTCTATAACTAACAGGCAATCTCTCTCTTTATGCCAACAATTAGATTCGCTCCAGGCTTaGGACACATCGAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: THCFSITNRQSLSLCQQLDSLQA*DTSRTV
Trigger: CACTGTCCTCGATGTGTCCCAAGCCTGGAGCGAATC...TAATTGTTGGCATAAAGAGAGAGATTGCCTGTTAGTTATAGAGAAACAGTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp ATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGTACAACTGTTGTTATTCCCCACATCGTCTCATaGCAAACCGAAGAACGGGAT +
Preference number: 4 (lower is better)
Translates to: MTLVNMPHAFGGSTTVVIPHIVS*QTEERD
Trigger: ATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGG...AATAACAACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR GCA 90 bp TTCAGAATACATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGTACAACACTTGTGCCTGGGTTTaGTGTAGTCGTCTGTTACTG +
Preference number: 4 (lower is better)
Translates to: FRIHDIGKYATCLWWKYNTCAWV*CSRLLL
Trigger: CAGTAACAGACGACTACAGCAAACCCAGGCACAAGT...GTTGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTATTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR GCA 90 bp ACTCACTGTTTCTCTATAACTAACAGGCAATCTCTCTCTTTATGCCAACAATTAGGAGGCGCCAGCTGTTaGTCTTCGGGTAATGACTTA +
Preference number: 4 (lower is better)
Translates to: THCFSITNRQSLSLCQQLGGASC*SSGNDL
Trigger: TAAGTCATTACCCGAAGAGCAACAGCTGGCGCCTCC...TAATTGTTGGCATAAAGAGAGAGATTGCCTGTTAGTTATAGAGAAACAGTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp GCTTCTAGGATGGAAACAAGTCCTGCTATTTTCACAATCCCTAAGTGTTCTCCATTTCGAAAAGGGTACTaGACTGAAACCAAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: ASRMETSPAIFTIPKCSPFRKGY*TETKLD
Trigger: GTCCAACTTGGTTTCAGTGCAGTACCCTTTTCGAAA...TGGAGAACACTTAGGGATTGTGAAAATAGCAGGACTTGTTTCCATCCTAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp TTTTACTTTCGAAAAGGGTACTGCACTGAAACCAAGTTGGACTTTGGTCCACCCCAATCTCTCTCTTTATaGCAACAATTAACTGGGAGC +
Preference number: 4 (lower is better)
Translates to: FYFRKGYCTETKLDFGPPQSLSL*QQLTGS
Trigger: GCTCCCAGTTAATTGTTGGCATAAAGAGAGAGATTG...GGGTGGACCAAAGTCCAACTTGGTTTCAGTGCAGTACCCTTTTCGAAAGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp GTAAATATGCCACATGCCTTTGGTGGAAGTACAACTGTTGTTATTACTCTATACTTCTCCTCCCAAGTCTaGGCAGCTTCATGGGTACTT +
Preference number: 4 (lower is better)
Translates to: VNMPHAFGGSTTVVITLYFSSQV*AASWVL
Trigger: AAGTACCCATGAAGCTGCCCAGACTTGGGAGGAGAA...GTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR TCA 90 bp GCCTTTGGTGGAAGTACAACTGTTGTTATTACTCTATACAAGTATGAGATCAGGAAAAGGGTACTGCACTaGAACCAAGTTGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: AFGGSTTVVITLYKYEIRKRVLH*NQVGLW
Trigger: CCAAAGTCCAACTTGGTTTCAGTGCAGTACCCTTTT...CCTGATCTCATACTTGTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp GAATACATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGTACAACTGTTGTTTTGTTGCACATTTaGTCATGCACATGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EYMTLVNMPHAFGGSTTVVLLHI*SCTWVV
Trigger: CACCACCCATGTGCATGAGCAAATGTGCAACAAAAC...AACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp ATGCCTTTGGTGGAAGTACAACTGTTGTTATTACTCTATACAAGTATGAGATCACCGAAGAACGGGATGTaGGAAGCTCAGCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: MPLVEVQLLLLLYTSMRSPKNGM*EAQLHL
Trigger: CAAATGAAGCTGAGCTTCCCACATCCCGTTCTTCGG...TGATCTCATACTTGTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR TCA 90 bp GTAAATATGCCACATGCCTTTGGTGGAAGTACAACTGTTGTTATTACTCTATACGAGAAAACAAGAGGGTaGATTACACCAAGTTACCAG +
Preference number: 4 (lower is better)
Translates to: VNMPHAFGGSTTVVITLYEKTRG*ITPSYQ
Trigger: CTGGTAACTTGGTGTAATTCACCCTCTTGTTTTCTC...GTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361716.8
CDS-3UTR CCA 90 bp TTTTTGCCTTTGTTCAGAATACATGACATTGGTAAATATGCCACATGCCTTTGGTATGCCACATGCCTTTaGTGGAAGTACAACTGTTGT +
Preference number: 4 (lower is better)
Translates to: FLPLFRIHDIGKYATCLWYATCL*WKYNCC
Trigger: ACAACAGTTGTACTTCCACCAAAGGCATGTGGCATA...CCAAAGGCATGTGGCATATTTACCAATGTCATGTATTCTGAACAAAGGCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR GCA 90 bp ACTCACTGTTTCTCTATAACTAACAGGCAATCTCTCTCTTTATGCCAACAATTAGGTAAATATGCCACATaGCTTTGGTGGAAGTACAAC +
Preference number: 4 (lower is better)
Translates to: THCFSITNRQSLSLCQQLGKYAT*LWWKYN
Trigger: GTTGTACTTCCACCAAAGGCATGTGGCATATTTACC...TAATTGTTGGCATAAAGAGAGAGATTGCCTGTTAGTTATAGAGAAACAGTGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp ATGCCTTTGGTGGAAGTACAACTGTTGTTATTACTCTATACAAGTATGAGATCAACTTCCTCTTTAGCTTaGCAGCACTGCTCTCAAATT +
Preference number: 4 (lower is better)
Translates to: MPLVEVQLLLLLYTSMRSTSSLA*QHCSQI
Trigger: AATTTGAGAGCAGTGCTGCCAAGCTAAAGAGGAAGT...TGATCTCATACTTGTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CCA 90 bp TGTTCAGAATACATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGTACAAGACACGGAAAATCCTaGACGAACAGATTAGAAATA +
Preference number: 4 (lower is better)
Translates to: CSEYMTLVNMPHAFGGSTRHGKS*TNRLEI
Trigger: TATTTCTAATCTGTTCGTCCAGGATTTTCCGTGTCT...TGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTATTCTGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CCA 90 bp GTAAATATGCCACATGCCTTTGGTGGAAGTACAACTGTTGTTATTACTCTATACCTAGATGGATTTATTTaGTGCCCTCATACAGAATGC +
Preference number: 4 (lower is better)
Translates to: VNMPHAFGGSTTVVITLYLDGFI*CPHTEC
Trigger: GCATTCTGTATGAGGGCACCAAATAAATCCATCTAG...GTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR GCA 90 bp ACTCACTGTTTCTCTATAACTAACAGGCAATCTCTCTCTTTATGCCAACAATTATATACACACAAACCATaGAAAGAGGAGGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: THCFSITNRQSLSLCQQLYTHKP*KEEEEK
Trigger: TTTCTCTTCCTCCTCTTTGCATGGTTTGTGTGTATA...TAATTGTTGGCATAAAGAGAGAGATTGCCTGTTAGTTATAGAGAAACAGTGAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS TCA 90 bp CTCTCCGGAGGCTGCGGCGAGACACCCGGTGAGGGACGCTGCGGCTaGAGTGGACGGAACTGCCAAGCTCCGCCTCGCGCCGACTACCCC +
Preference number: 5 (lower is better)
Translates to: LSGGCGETPGEGRCG*SGRNCQAPPRADYP
Trigger: GGGGTAGTCGGCGCGAGGCGGAGCTTGGCAGTTCCGTCCACTTCAGCCGCAGCGTCCCTCACCGGGTGTCTCGCCGCAGCCTCCGGAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
ENST00000535927.5
ENST00000539047.1
CDS-3UTR CAA 90 bp GGCTGGTGGGTCTACATGACTTCTCTGCATCCTGAGGATCGGCCGGGCCCCAGGTCTCCCTGCAATGCGTaGCAGGGGGAAGGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: GWWVYMTSLHPEDRPGPRSPCNA*QGEGLS
Trigger: GGACAAGCCTTCCCCCTGCAACGCATTGCAGGGAGA...CCTGGGGCCCGGCCGATCCTCAGGATGCAGAGAAGTCATGTAGACCCACCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361716.8
CDS-3UTR CAA 90 bp AGTGGTGGTTCTTCTCCAGCGGTGACCCCCTGCATTAGGCAAGGAGGAGCCCAGTCTTCAGTCCCGCCCTaGGGCAGGACGAAGGGAATG +
Preference number: 5 (lower is better)
Translates to: SGGSSPAVTPCIRQGGAQSSVPP*GRTKGM
Trigger: CATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGA...CTGGGCTCCTCCTTGCCTAATGCAGGGGGTCACCGCTGGAGAAGAACCACCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CAA 90 bp GCCGTTGGGAGGGTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGTCCCTCTCCAGGACCTaGTCCACGTTCACACGTATG +
Preference number: 5 (lower is better)
Translates to: AVGRVLTAFFQLFSPALGSLSRT*STFTRM
Trigger: CATACGTGTGAACGTGGACAAGGTCCTGGAGAGGGA...CCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTACCCTCCCAACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CAA 90 bp ACTTGCCTCATCCCTGTCTTTGGCAAGTGCACGGGTGGTGTGGAGGAAAGGATTCCTGCCCTCCTCCCCTaGCACCTGGGCTTATCCCAC +
Preference number: 5 (lower is better)
Translates to: TCLIPVFGKCTGGVEERIPALLP*HLGLSH
Trigger: GTGGGATAAGCCCAGGTGCAAGGGGAGGAGGGCAGG...AATCCTTTCCTCCACACCACCCGTGCACTTGCCAAAGACAGGGATGAGGCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp CACATCGAGGACAGTGGTGGTTCTTCTCCAGCGGTGACCCCCTGCATTAGGCAATCTTCAGTCCCGCCCTaGGGCAGGACGAAGGGAATG +
Preference number: 5 (lower is better)
Translates to: HIEDSGGSSPAVTPCIRQSSVPP*GRTKGM
Trigger: CATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGA...TTGCCTAATGCAGGGGGTCACCGCTGGAGAAGAACCACCACTGTCCTCGATGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CAA 90 bp GCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGAGGTCCCTGCCCCTTCCCTaGGCCTCCAACTCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: AKSQGFVAHLLMHMGGGRSLPLP*ASNSLG
Trigger: CCCCAAAGAGTTGGAGGCCAAGGGAAGGGGCAGGGA...CCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp TTGGGACACATCGAGGACAGTGGTGGTTCTTCTCCAGCGGTGACCCCCTGCATTGGATTCGCTCCAGGCTaGGGACACATCGAGGACAGT +
Preference number: 5 (lower is better)
Translates to: LGHIEDSGGSSPAVTPCIGFAPG*GHIEDS
Trigger: ACTGTCCTCGATGTGTCCCAAGCCTGGAGCGAATCC...AATGCAGGGGGTCACCGCTGGAGAAGAACCACCACTGTCCTCGATGTGTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
ENST00000535180.5
CDS-3UTR CAA 90 bp GGTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGCAACTCTTTGGGGCTTaGGGGGAACTTGAGAGTACA +
Preference number: 5 (lower is better)
Translates to: GTDCFLPALQSRPWAGRRQLFGA*GELEST
Trigger: TGTACTCTCAAGTTCCCCCAAAGCCCCAAAGAGTTG...CCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp CTGCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGATCTTCAGTCCCGCCCTaGGGCAGGACGAAGGGAATG +
Preference number: 5 (lower is better)
Translates to: LQSPRVLLHICSCTWVVGSSVPP*GRTKGM
Trigger: CATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGA...TCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp GAGGGTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAGAAGCTCAGCTTCATTaGACTGCAAAGTCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: EGTDCFLPALQSRPWAGREAQLH*TAKSQG
Trigger: ACCCTGGGACTTTGCAGTCAAATGAAGCTGAGCTTC...TCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp CAGACACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTCCCTCTCCAGGACCTaGTCCACGTTCACACGTATG +
Preference number: 5 (lower is better)
Translates to: QTHSGNPTSSHGKPKNGMSLSRT*STFTRM
Trigger: CATACGTGTGAACGTGGACAAGGTCCTGGAGAGGGA...CATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CAA 90 bp CTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGAATGTGGGAAATTCAGGTCTCTCCATaGTTAAGTGCCCCATCCCCA +
Preference number: 5 (lower is better)
Translates to: LSSSSSVPPLGRTKGMWEIQVSP*LSAPSP
Trigger: TGGGGATGGGGCACTTAACAATGGAGAGACCTGAAT...TTCCCACATTCCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361716.8
CDS-3UTR CAA 90 bp GAGGGTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAGCAGCATTTCTAGTGTaGAGGGACAGAGTGCAAATG +
Preference number: 5 (lower is better)
Translates to: EGTDCFLPALQSRPWAGRAAFLV*RDRVQM
Trigger: CATTTGCACTCTGTCCCTCAACACTAGAAATGCTGC...TCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp CCCCAAAGAACAAGGCCAACTACACCTGGTGAGCCTCAGAGGGACAGAAACCCATGCACTGAAACCAAGTaGGACTTTGGTCCACCCCCA +
Preference number: 5 (lower is better)
Translates to: PQRTRPTTPGEPQRDRNPCTETK*DFGPPP
Trigger: TGGGGGTGGACCAAAGTCCAACTTGGTTTCAGTGCA...TGGGTTTCTGTCCCTCTGAGGCTCACCAGGTGTAGTTGGCCTTGTTCTTTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp TTCCAGCTAGAAGCACATGGGACTGCTTCTAGGATGGAAACAAGTCCTGCTATTCCTGCCCTCCTCCCCTaGCACCTGGGCTTATCCCAC +
Preference number: 5 (lower is better)
Translates to: FQLEAHGTASRMETSPAIPALLP*HLGLSH
Trigger: GTGGGATAAGCCCAGGTGCAAGGGGAGGAGGGCAGG...AATAGCAGGACTTGTTTCCATCCTAGAAGCAGTCCCATGTGCTTCTAGCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp GTTTTGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCAGACCCTGCCCAGGATTCGCTCCAGGCTaGGGACACATCGAGGACAGT +
Preference number: 5 (lower is better)
Translates to: VLSNEMLLHGKWASRPCPGFAPG*GHIEDS
Trigger: ACTGTCCTCGATGTGTCCCAAGCCTGGAGCGAATCC...TGGGCAGGGTCTGGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CAA 90 bp AAACCAAGTTGGACTTTGGTCCACCCCCAGGACCCTCTTCAGGCCTGGTCCAGGGGTTTTGTTGCACATTaGCTCATGCACATGGGTGGT +
Preference number: 5 (lower is better)
Translates to: KPSWTLVHPQDPLQAWSRGFVAH*LMHMGG
Trigger: ACCACCCATGTGCATGAGCAAATGTGCAACAAAACC...CCTGGACCAGGCCTGAAGAGGGTCCTGGGGGTGGACCAAAGTCCAACTTGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp GAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGGGAAGCTCAGCCAACTCTTTGGGGCTTaGGGGGAACTTGAGAGTACA +
Preference number: 5 (lower is better)
Translates to: ETPHRLMANRRTGCGKLSQLFGA*GELEST
Trigger: TGTACTCTCAAGTTCCCCCAAAGCCCCAAAGAGTTG...GCTGAGCTTCCCACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp GAGGTGATGACAGACACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAAAACCAAGTTGGACTTaGGTCCACCCCCAGGACCCT +
Preference number: 5 (lower is better)
Translates to: EVMTDTQWKPHIVSWQTEKPSWT*VHPQDP
Trigger: AGGGTCCTGGGGGTGGACCAAAGTCCAACTTGGTTT...TTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTCTGTCATCACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp GCCGTTGGGAGGGTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGGCTAGATGGATTTATTaGGTGCCCTCATACAGAATG +
Preference number: 5 (lower is better)
Translates to: AVGRVLTAFFQLFSPALGARWIY*VPSYRM
Trigger: CATTCTGTATGAGGGCACCAAATAAATCCATCTAGC...CCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTACCCTCCCAACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp TTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGAGGAAAGGGGGATAGCAGGATTCGCTCCAGGCTaGGGACACATCGAGGACAGT +
Preference number: 5 (lower is better)
Translates to: FCCTFAHAHGWWEERGIAGFAPG*GHIEDS
Trigger: ACTGTCCTCGATGTGTCCCAAGCCTGGAGCGAATCC...TGCTATCCCCCTTTCCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CAA 90 bp GAACAGGAGGCGCCATCTCCCTGCAATGCGTTGCAGGGGGAAGGCTTGTCCATCAGCATGATCATCATCTaGCAGTTTTTCCACCAATAC +
Preference number: 5 (lower is better)
Translates to: EQEAPSPCNALQGEGLSISMIII*QFFHQY
Trigger: GTATTGGTGGAAAAACTGCAAGATGATGATCATGCT...GATGGACAAGCCTTCCCCCTGCAACGCATTGCAGGGAGATGGCGCCTCCTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361716.8
CDS-3UTR CAA 90 bp GACTGCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGTGCACTGAAACCAAGTaGGACTTTGGTCCACCCCCA +
Preference number: 5 (lower is better)
Translates to: DCKVPGFCCTFAHAHGWWCTETK*DFGPPP
Trigger: TGGGGGTGGACCAAAGTCCAACTTGGTTTCAGTGCA...CCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp ATGGTTTTGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCAGACCCTGCCCCAGGAAGAACCACTaGCCTCATCCCTGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: MVLSNEMLLHGKWASRPCPRKNH*PHPCLW
Trigger: CCAAAGACAGGGATGAGGCAAGTGGTTCTTCCTGGG...GCAGGGTCTGGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp GTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGGAAAGGAAGGATGGTTTaGAGCAATGAAATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: VLTAFFQLFSPALGQDEGKGRMV*SNEMLL
Trigger: CAGCAGCATTTCATTGCTCAAAACCATCCTTCCTTT...CCCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CAA 90 bp CCTCATCCCTGTCTTTGGCAAGTGCACGGGTGGTGTGGAGGAAAGGATTCCATGGGTTTTGTTGCACATTaGCTCATGCACATGGGTGGT +
Preference number: 5 (lower is better)
Translates to: PHPCLWQVHGWCGGKDSMGFVAH*LMHMGG
Trigger: ACCACCCATGTGCATGAGCAAATGTGCAACAAAACC...CATGGAATCCTTTCCTCCACACCACCCGTGCACTTGCCAAAGACAGGGATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS GCA 90 bp TTGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCAGACCCTaGCCAGCATGGCCTCAGCCTCTTCTTACAATAACTACCACGATG +
Preference number: 5 (lower is better)
Translates to: LSNEMLLHGKWASRP*PAWPQPLLTITTTM
Trigger: CATCGTGGTAGTTATTGTAAGAAGAGGCTGAGGCCATGCTGGGCAGGGTCTGGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535180.5
CDS-3UTR CAA 90 bp GGTACTGACTGCTTTCTTCCAGCTCTTCAGTCCCGCCCTTGGGCAGGACGAAGGAGCATGATCATCATCTaGCAGTTTTTCCACCAATAC +
Preference number: 5 (lower is better)
Translates to: GTDCFLPALQSRPWAGRRSMIII*QFFHQY
Trigger: GTATTGGTGGAAAAACTGCAAGATGATGATCATGCT...CCTTCGTCCTGCCCAAGGGCGGGACTGAAGAGCTGGAAGAAAGCAGTCAGTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CAA 90 bp AAGGGCGAAAGGAAAGGAAGGATGGTTTTGAGCAATGAAATGCTGCTGCATGGAGGATTCGCTCCAGGCTaGGGACACATCGAGGACAGT +
Preference number: 5 (lower is better)
Translates to: KGERKGRMVLSNEMLLHGGFAPG*GHIEDS
Trigger: ACTGTCCTCGATGTGTCCCAAGCCTGGAGCGAATCC...TCCATGCAGCAGCATTTCATTGCTCAAAACCATCCTTCCTTTCCTTTCGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CAA 90 bp CACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGGGAAGGTTTTGTTGCACATTaGCTCATGCACATGGGTGGT +
Preference number: 5 (lower is better)
Translates to: HSGNPTSSHGKPKNGMWEGFVAH*LMHMGG
Trigger: ACCACCCATGTGCATGAGCAAATGTGCAACAAAACC...TTCCCACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CAA 90 bp TTCCAGCTAGAAGCACATGGGACTGCTTCTAGGATGGAAACAAGTCCTGCTATTTCCCTCTCCAGGACCTaGTCCACGTTCACACGTATG +
Preference number: 5 (lower is better)
Translates to: FQLEAHGTASRMETSPAISLSRT*STFTRM
Trigger: CATACGTGTGAACGTGGACAAGGTCCTGGAGAGGGA...AATAGCAGGACTTGTTTCCATCCTAGAAGCAGTCCCATGTGCTTCTAGCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp AGTCACCATGGGCACCGATACTCTTCTCCTCCCAAGTCTGGGCAGCTTCATGGGAGCATGATCATCATCTaGCAGTTTTTCCACCAATAC +
Preference number: 5 (lower is better)
Translates to: SHHGHRYSSPPKSGQLHGSMIII*QFFHQY
Trigger: GTATTGGTGGAAAAACTGCAAGATGATGATCATGCT...CCCATGAAGCTGCCCAGACTTGGGAGGAGAAGAGTATCGGTGCCCATGGTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp GGAAACCCCACATCGTCTCATGGCAAACCGAAGAACGGGATGTGGGAAGCTCAGGCTAGATGGATTTATTaGGTGCCCTCATACAGAATG +
Preference number: 5 (lower is better)
Translates to: GNPTSSHGKPKNGMWEAQARWIY*VPSYRM
Trigger: CATTCTGTATGAGGGCACCAAATAAATCCATCTAGC...CTGAGCTTCCCACATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp TGGGAAGCTCAGCTTCATTTGACTGCAAAGTCCCAGGGTTTTGTTGCACATTTGCCCAGGAAGAACCACTaGCCTCATCCCTGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: WEAQLHLTAKSQGFVAHLPRKNH*PHPCLW
Trigger: CCAAAGACAGGGATGAGGCAAGTGGTTCTTCCTGGG...CAAATGTGCAACAAAACCCTGGGACTTTGCAGTCAAATGAAGCTGAGCTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp GCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGAGGATATGCCACATGCCTTaGGTGGAAGTACAACTGTTG +
Preference number: 5 (lower is better)
Translates to: AKSQGFVAHLLMHMGGGRICHMP*VEVQLL
Trigger: CAACAGTTGTACTTCCACCAAAGGCATGTGGCATAT...CCTCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CAA 90 bp GAGGTGATGACAGACACACAGTGGAAACCCCACATCGTCTCATGGCAAACCGAATACTTCCTCTTTAGCTaGGCAGCACTGCTCTCAAAT +
Preference number: 5 (lower is better)
Translates to: EVMTDTQWKPHIVSWQTEYFLFS*AALLSN
Trigger: ATTTGAGAGCAGTGCTGCCAAGCTAAAGAGGAAGTA...TTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTGTCTGTCATCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CAA 90 bp AAAGATCTCACACTGCTAACACCCTCACGCTCCTTCATCAACAGGAAGAGAGGATTGCAGGGGGAAGGCTaGTCCATCAAAGAAATCCCT +
Preference number: 5 (lower is better)
Translates to: KDLTLLTPSRSFINRKRGLQGEG*SIKEIP
Trigger: AGGGATTTCTTTGATGGACAAGCCTTCCCCCTGCAA...TCCTCTCTTCCTGTTGATGAAGGAGCGTGAGGGTGTTAGCAGTGTGAGATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361716.8
CDS-3UTR CAA 90 bp GTTTTGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCAGACCCTGCCCAATATGCCACATGCCTTaGGTGGAAGTACAACTGTTG +
Preference number: 5 (lower is better)
Translates to: VLSNEMLLHGKWASRPCPICHMP*VEVQLL
Trigger: CAACAGTTGTACTTCCACCAAAGGCATGTGGCATAT...TGGGCAGGGTCTGGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp AGCTCCTTCCAGCTAGAAGCACATGGGACTGCTTCTAGGATGGAAACAAGTCCTTACTTCCTCTTTAGCTaGGCAGCACTGCTCTCAAAT +
Preference number: 5 (lower is better)
Translates to: SSFQLEAHGTASRMETSPYFLFS*AALLSN
Trigger: ATTTGAGAGCAGTGCTGCCAAGCTAAAGAGGAAGTA...AGGACTTGTTTCCATCCTAGAAGCAGTCCCATGTGCTTCTAGCTGGAAGGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp CTGCAAAGTCCCAGGGTTTTGTTGCACATTTGCTCATGCACATGGGTGGTGGGAAGCATGATCATCATCTaGCAGTTTTTCCACCAATAC +
Preference number: 5 (lower is better)
Translates to: LQSPRVLLHICSCTWVVGSMIII*QFFHQY
Trigger: GTATTGGTGGAAAAACTGCAAGATGATGATCATGCT...TCCCACCACCCATGTGCATGAGCAAATGTGCAACAAAACCCTGGGACTTTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CAA 90 bp CCTTTGTTCAGAATACATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGTTGGCCTCCAACTCTTaGGGGCTTTGGGGGAACTTG +
Preference number: 5 (lower is better)
Translates to: PLFRIHDIGKYATCLWWKLASNS*GLWGNL
Trigger: CAAGTTCCCCCAAAGCCCCAAAGAGTTGGAGGCCAA...CTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTATTCTGAACAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp TTTGGTGGAAGTACAACTGTTGTTATTACTCTATACAAGTATGAGATCAGGGTTTCCCTGCCCCTTCCCTaGGCCTCCAACTCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: FGGSTTVVITLYKYEIRVSLPLP*ASNSLG
Trigger: CCCCAAAGAGTTGGAGGCCAAGGGAAGGGGCAGGGA...AACCCTGATCTCATACTTGTATAGAGTAATAACAACAGTTGTACTTCCACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp GCCTTTGGTGGAAGTACAACTGTTGTTATTACTCTATACAAGTATGAGATCAGGAAACCAAGTTGGACTTaGGTCCACCCCCAGGACCCT +
Preference number: 5 (lower is better)
Translates to: AFGGSTTVVITLYKYEIRKPSWT*VHPQDP
Trigger: AGGGTCCTGGGGGTGGACCAAAGTCCAACTTGGTTT...CCTGATCTCATACTTGTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp GGAAGGATGGTTTTGAGCAATGAAATGCTGCTGCATGGAAAGTGGGCATCCAGAAAAGGAAGGATGGTTTaGAGCAATGAAATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GRMVLSNEMLLHGKWASRKGRMV*SNEMLL
Trigger: CAGCAGCATTTCATTGCTCAAAACCATCCTTCCTTT...TCTGGATGCCCACTTTCCATGCAGCAGCATTTCATTGCTCAAAACCATCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000535180.5
CDS-3UTR CAA 90 bp ATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGTACAACTGTTGTTATTTTGGCCTCCAACTCTTaGGGGCTTTGGGGGAACTTG +
Preference number: 5 (lower is better)
Translates to: MTLVNMPHAFGGSTTVVILASNS*GLWGNL
Trigger: CAAGTTCCCCCAAAGCCCCAAAGAGTTGGAGGCCAA...AATAACAACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp AGCAGCATTTCTAGTGTTGAGGGACAGAGTGCAAATGAACGCAACGAAAAAGGAATATGCCACATGCCTTaGGTGGAAGTACAACTGTTG +
Preference number: 5 (lower is better)
Translates to: SSISSVEGQSANERNEKGICHMP*VEVQLL
Trigger: CAACAGTTGTACTTCCACCAAAGGCATGTGGCATAT...TCCTTTTTCGTTGCGTTCATTTGCACTCTGTCCCTCAACACTAGAAATGCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp GTAAATATGCCACATGCCTTTGGTGGAAGTACAACTGTTGTTATTACTCTATACGAAGCTCAGCTTCATTaGACTGCAAAGTCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: VNMPHAFGGSTTVVITLYEAQLH*TAKSQG
Trigger: ACCCTGGGACTTTGCAGTCAAATGAAGCTGAGCTTC...GTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CAA 90 bp ATGCCTTTGGTGGAAGTACAACTGTTGTTATTACTCTATACAAGTATGAGATCAGAAGCTCAGCTTCATTaGACTGCAAAGTCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: MPLVEVQLLLLLYTSMRSEAQLH*TAKSQG
Trigger: ACCCTGGGACTTTGCAGTCAAATGAAGCTGAGCTTC...TGATCTCATACTTGTATAGAGTAATAACAACAGTTGTACTTCCACCAAAGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
CDS-3UTR CAA 90 bp ACTCACTGTTTCTCTATAACTAACAGGCAATCTCTCTCTTTATGCCAACAATTAGCAGCATTTCTAGTGTaGAGGGACAGAGTGCAAATG +
Preference number: 5 (lower is better)
Translates to: THCFSITNRQSLSLCQQLAAFLV*RDRVQM
Trigger: CATTTGCACTCTGTCCCTCAACACTAGAAATGCTGC...TAATTGTTGGCATAAAGAGAGAGATTGCCTGTTAGTTATAGAGAAACAGTGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS-3UTR CAA 90 bp GAATACATGACATTGGTAAATATGCCACATGCCTTTGGTGGAAGTACAACTGTTAAAGGAAGGATGGTTTaGAGCAATGAAATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: EYMTLVNMPHAFGGSTTVKGRMV*SNEMLL
Trigger: CAGCAGCATTTCATTGCTCAAAACCATCCTTCCTTT...AACAGTTGTACTTCCACCAAAGGCATGTGGCATATTTACCAATGTCATGTATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361716.8
ENST00000396308.4
CDS TCA 72 bp GGCTGCGGCGAGACACCCGGTGAGGGACGCTGCGGCTaGAGTGGACGGAACTGCCAAGCTCCGCCTCGCGCC +
Preference number: 6 (lower is better)
Translates to: GCGETPGEGRCG*SGRNCQAPPRA
Trigger: GGCGCGAGGCGGAGCTTGGCAGTTCCGTCCACTTCAGCCGCAGCGTCCCTCACCGGGTGTCTCGCCGCAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
ENST00000535180.5
ENST00000535927.5
ENST00000539047.1
CDS TCA 72 bp TCTGTTCCTCTCCGGAGGCTGCGGCGAGACACCCGGTaGGGGACGCTGCGGCTGAAGTGGACGGAACTGCCA +
Preference number: 6 (lower is better)
Translates to: SVPLRRLRRDTR*GTLRLKWTELP
Trigger: TGGCAGTTCCGTCCACTTCAGCCGCAGCGTCCCTCACCGGGTGTCTCGCCGCAGCCTCCGGAGAGGAACAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
ENST00000535180.5
ENST00000535927.5
ENST00000539047.1
CDS GCA 72 bp TTGGCAGCACTGCTCTCAAATTGTGATGCTCCTGCCTaGAAGGCATCAGCTCGGTCATCCAGCTCTGACAGC +
Preference number: 6 (lower is better)
Translates to: LAALLSNCDAPA*KASARSSSSDS
Trigger: GCTGTCAGAGCTGGATGACCGAGCTGATGCCTTGCAGGCAGGAGCATCACAATTTGAGAGCAGTGCTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361716.8
ENST00000396308.4
ENST00000400911.7
ENST00000535180.5
ENST00000535927.5
ENST00000538970.5
ENST00000539047.1
ENST00000544432.5
CDS CCA 72 bp CTGCATGGAAAGTGGGCATCCAGACCCTGCCCAGCATaGCCTCAGCCTCTTCTTACAATAACTACCACGATG +
Preference number: 6 (lower is better)
Translates to: LHGKWASRPCPA*PQPLLTITTTM
Trigger: CATCGTGGTAGTTATTGTAAGAAGAGGCTGAGGCCATGCTGGGCAGGGTCTGGATGCCCACTTTCCATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535180.5
CDS GCA 72 bp GAAATGCTGCTGCATGGAAAGTGGGCATCCAGACCCTaGCCAGCATGGCCTCAGCCTCTTCTTACAATAACT +
Preference number: 6 (lower is better)
Translates to: EMLLHGKWASRP*PAWPQPLLTIT
Trigger: AGTTATTGTAAGAAGAGGCTGAGGCCATGCTGGGCAGGGTCTGGATGCCCACTTTCCATGCAGCAGCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535180.5