Pregenerated sensors for UXT (Homo sapiens)
Ensembl gene IDs: ENSG00000126756Ensembl transcript IDs: ENST00000333119.7, ENST00000335890.3, ENST00000376964.3, ENST00000485641.5
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | TCTGGGAAATTCTGCAGGCCTTGTAGTTCTCTAAGCCCCTCTAGCAACATGTGGTCCTTGGTGAGGCTGTaGCTGAGCTCTGTGAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: SGKFCRPCSSLSPSSNMWSLVRL*LSSVRR Trigger: TCTCCTCACAGAGCTCAGCAACAGCCTCACCAAGGA...CCACATGTTGCTAGAGGGGCTTAGAGAACTACAAGGCCTGCAGAATTTCCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR CCA 90 bp | TCTGGGAAATTCTGCAGGCCTTGTAGTTCTCTAAGCCCCTCTAGCAACATGTGGGCACTTTCTCCCCCGTaGCCTCCACCGCCCGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: SGKFCRPCSSLSPSSNMWALSPP*PPPPAA Trigger: AGCGGCGGGCGGTGGAGGCCACGGGGGAGAAAGTGC...CCACATGTTGCTAGAGGGGCTTAGAGAACTACAAGGCCTGCAGAATTTCCCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR CCA 90 bp | AGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCATGGAGTCCTTGGTGTTGTCCGGCTCAAGCTaGAGGTTCAGCCTTCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: SPSSNMWIWALIFMESLVLSGSS*RFSLPP Trigger: GGGCGGAAGGCTGAACCTCCAGCTTGAGCCGGACAA...CACCAAGGACTCCATGAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR TCA 90 bp | AGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCATGGAGTCCTTGGTGGGCCACATAGATGCGTaGAGTATCTGGGCTGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: SPSSNMWIWALIFMESLVGHIDA*SIWAGV Trigger: GACTCCAGCCCAGATACTTCACGCATCTATGTGGCC...CACCAAGGACTCCATGAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR TCA 90 bp | AGTTCTCTAAGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCATGGAGGGGGGAAGACCATGTTaGCCGATCCAGTTTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SSLSPSSNMWIWALIFMEGGRPC*PIQFGL Trigger: GAGGCCAAACTGGATCGGTCAACATGGTCTTCCCCC...CTCCATGAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCTTAGAGAACT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR CCA 90 bp | CCTTGTAGTTCTCTAAGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCCTACCCTCTCAACGCTaGGAATCGGCTTGTCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: PCSSLSPSSNMWIWALIFLPSQR*ESACPA Trigger: AGCCGGACAAGCCGATTCCCAGCGTTGAGAGGGTAG...GAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCTTAGAGAACTACAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR GCA 90 bp | CCTTGTAGTTCTCTAAGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCCCAGGGCCACATAGATaGGTGAAGTATCTGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PCSSLSPSSNMWIWALIFPGPHR*VKYLGW Trigger: CCAGCCCAGATACTTCACGCATCTATGTGGCCCTGG...GAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCTTAGAGAACTACAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| 3UTR CAA 72 bp | AACATGTGGATATGGGCTTTGATATTCATGGAGTCCTaGGTGAGGCTGTTGCTGAGCTCTGTGAGGAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: NMWIWALIFMES*VRLLLSSVRRE Trigger: CTCTCTCCTCACAGAGCTCAGCAACAGCCTCACCAAGGACTCCATGAATATCAAAGCCCATATCCACATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR GCA 90 bp | CCTTGTAGTTCTCTAAGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCTTTCGCAAGTCCCGCTaGAGCACGTCACTGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: PCSSLSPSSNMWIWALIFFRKSR*STSLMK Trigger: CTTCATCAGTGACGTGCTGCAGCGGGACTTGCGAAA...GAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCTTAGAGAACTACAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR CCA 90 bp | AGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCATGGAGTCCTTGGTGTATACCTTGTCTCGATaGTCCAGCACCTTTCGCAAG | + |
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Preference number: 4 (lower is better) Translates to: SPSSNMWIWALIFMESLVYTLSR*SSTFRK Trigger: CTTGCGAAAGGTGCTGGACCATCGAGACAAGGTATA...CACCAAGGACTCCATGAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR TCA 90 bp | AGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCATGGAGTCCTTGGTGATGACATTTCTCAGTTaGAGGTATTTGGCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPSSNMWIWALIFMESLVMTFLS*RYLASC Trigger: GCAGCTGGCCAAATACCTTCAACTGAGAAATGTCAT...CACCAAGGACTCCATGAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR TCA 90 bp | AGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCATGGAGTCCTTGGTGTGTGGATATGGGCTTTaGTATTCATGGAGTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SPSSNMWIWALIFMESLVCGYGL*YSWSPW Trigger: CCAAGGACTCCATGAATATCAAAGCCCATATCCACA...CACCAAGGACTCCATGAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR CCA 90 bp | AGTTCTCTAAGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCATGGAGATGGTGAGGCTTCTCTaGGAAATTCTGCAGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SSLSPSSNMWIWALIFMEMVRLL*EILQAL Trigger: CAAGGCCTGCAGAATTTCCCAGAGAAGCCTCACCAT...CTCCATGAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCTTAGAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR CCA 90 bp | AGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCATGGAGTCCTTGGTGGTGAAGTATCTGGGCTaGAGTCGCTCAATGACATTT | + |
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Preference number: 4 (lower is better) Translates to: SPSSNMWIWALIFMESLVVKYLG*SRSMTF Trigger: AAATGTCATTGAGCGACTCCAGCCCAGATACTTCAC...CACCAAGGACTCCATGAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR TCA 90 bp | CCTTGTAGTTCTCTAAGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCGGAAGAAGTCAATGGTaGGGCTTCTCTGGGAAATTC | + |
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Preference number: 4 (lower is better) Translates to: PCSSLSPSSNMWIWALIFGRSQW*GFSGKF Trigger: GAATTTCCCAGAGAAGCCTCACCATTGACTTCTTCC...GAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCTTAGAGAACTACAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR TCA 90 bp | AGTTCTCTAAGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCATGGAGGCTGGAGTCGCTCAATaGCATTTCTCAGTTGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: SSLSPSSNMWIWALIFMEAGVAQ*HFSVEG Trigger: ACCTTCAACTGAGAAATGTCATTGAGCGACTCCAGC...CTCCATGAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCTTAGAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR GCA 90 bp | CCTTGTAGTTCTCTAAGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCGAACTTGAGAGCTTCTaGCAGTGTCAACTCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: PCSSLSPSSNMWIWALIFELESF*QCQLQE Trigger: TTCCTGGAGTTGACACTGGCAGAAGCTCTCAAGTTC...GAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCTTAGAGAACTACAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR CCA 90 bp | AGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCATGGAGTCCTTGGTGTCAGTTGAAGGTATTTaGCCAGCTGCTCATATACCT | + |
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Preference number: 4 (lower is better) Translates to: SPSSNMWIWALIFMESLVSVEGI*PAAHIP Trigger: AGGTATATGAGCAGCTGGCCAAATACCTTCAACTGA...CACCAAGGACTCCATGAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR CCA 90 bp | AGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCATGGAGTCCTTGGTGCCCTCTAGCAACATGTaGATATGGGCTTTGATATTC | + |
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Preference number: 4 (lower is better) Translates to: SPSSNMWIWALIFMESLVPSSNM*IWALIF Trigger: GAATATCAAAGCCCATATCCACATGTTGCTAGAGGG...CACCAAGGACTCCATGAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR CCA 90 bp | CCTTGTAGTTCTCTAAGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCTTGACCGATCCAGTTTaGCCTCACACACAGTTCATC | + |
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Preference number: 4 (lower is better) Translates to: PCSSLSPSSNMWIWALIFLTDPV*PHTQFI Trigger: GATGAACTGTGTGTGAGGCCAAACTGGATCGGTCAA...GAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCTTAGAGAACTACAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR GCA 90 bp | CCTTGTAGTTCTCTAAGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCAGGTATTTGGCCAGCTaGTCATATACCTTGTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: PCSSLSPSSNMWIWALIFRYLAS*SYTLSR Trigger: TCGAGACAAGGTATATGAGCAGCTGGCCAAATACCT...GAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCTTAGAGAACTACAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR GCA 90 bp | AGTTCTCTAAGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCATGGAGTTCTCTGGGAAATTCTaGAGGCCTTGTAGTTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: SSLSPSSNMWIWALIFMEFSGKF*RPCSSL Trigger: TAGAGAACTACAAGGCCTGCAGAATTTCCCAGAGAA...CTCCATGAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCTTAGAGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR CCA 90 bp | CCTTGTAGTTCTCTAAGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCAGCAACATGTGGATATaGGCTTTGATATTCATGGAG | + |
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Preference number: 4 (lower is better) Translates to: PCSSLSPSSNMWIWALIFSNMWI*ALIFME Trigger: CTCCATGAATATCAAAGCCCATATCCACATGTTGCT...GAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCTTAGAGAACTACAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS CCA 90 bp | ATCTCTACCCTCTCAACGCTGGGAATCGGCTTGTCCGGCTCAAGCTaGAGGTTCAGCCTTCCGCCCCTCCCAACTCGGGGACCCGACCAC | + |
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Preference number: 5 (lower is better) Translates to: ISTLSTLGIGLSGSS*RFSLPPLPTRGPDH Trigger: GTGGTCGGGTCCCCGAGTTGGGAGGGGCGGAAGGCTGAACCTCCAGCTTGAGCCGGACAAGCCGATTCCCAGCGTTGAGAGGGTAGAGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335890.3 ENST00000485641.5 |
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| CDS CCA 90 bp | ATCCAGTTTGGCCTCACACACAGTTCATCTCTACCCTCTCAACGCTaGGAATCGGCTTGTCCGGCTCAAGCTGGAGGTTCAGCCTTCCGC | + |
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Preference number: 5 (lower is better) Translates to: IQFGLTHSSSLPSQR*ESACPAQAGGSAFR Trigger: GCGGAAGGCTGAACCTCCAGCTTGAGCCGGACAAGCCGATTCCCAGCGTTGAGAGGGTAGAGATGAACTGTGTGTGAGGCCAAACTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335890.3 ENST00000485641.5 |
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| CDS-3UTR CAA 90 bp | AGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCATGGAGTCCTTGGTGACGCTGGGAATCGGCTaGTCCGGCTCAAGCTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: SPSSNMWIWALIFMESLVTLGIG*SGSSWR Trigger: CCTCCAGCTTGAGCCGGACAAGCCGATTCCCAGCGT...CACCAAGGACTCCATGAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR CAA 90 bp | AGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCATGGAGTCCTTGGTGTCCTTGGTGAGGCTGTaGCTGAGCTCTGTGAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: SPSSNMWIWALIFMESLVSLVRL*LSSVRR Trigger: TCTCCTCACAGAGCTCAGCAACAGCCTCACCAAGGA...CACCAAGGACTCCATGAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS GCA 90 bp | ACTCACACCACTGTGTCAACGAAGAAGTTACAGCCCAAATCCACCTaGATATATAACTCCGAGTGCTTAGCTTCCTGTGGGGCCAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: THTTVSTKKLQPKST*IYNSECLASCGARE Trigger: TTCCCTGGCCCCACAGGAAGCTAAGCACTCGGAGTTATATATGCAGGTGGATTTGGGCTGTAACTTCTTCGTTGACACAGTGGTGTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376964.3 |
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| CDS TCA 90 bp | TCCGAGTGCTTAGCTTCCTGGAGTCGCTCAATGACATTTCTCAGTTaGAGGTATTTGGCCAGCTGCTCATATACCTTGTCTCGATGGTCC | + |
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Preference number: 5 (lower is better) Translates to: SECLASWSRSMTFLS*RYLASCSYTLSRWS Trigger: GGACCATCGAGACAAGGTATATGAGCAGCTGGCCAAATACCTTCAACTGAGAAATGTCATTGAGCGACTCCAGGAAGCTAAGCACTCGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333119.7 ENST00000335890.3 |
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| CDS TCA 90 bp | TGCGTGAAGTATCTGGGCTGGAGTCGCTCAATGACATTTCTCAGTTaGAGGTATTTGGCCAGCTGCTCATATACCTTGTCTCGATGGTCC | + |
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Preference number: 5 (lower is better) Translates to: CVKYLGWSRSMTFLS*RYLASCSYTLSRWS Trigger: GGACCATCGAGACAAGGTATATGAGCAGCTGGCCAAATACCTTCAACTGAGAAATGTCATTGAGCGACTCCAGCCCAGATACTTCACGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS GCA 90 bp | TCTGGGACCACTGTGTCAACGAAGAAGTTACAGCCCAAATCCACCTaGATATATAACTCCGAGTGCTTAGCTTCCTGGAGTCGCTCAATG | + |
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Preference number: 5 (lower is better) Translates to: SGTTVSTKKLQPKST*IYNSECLASWSRSM Trigger: CATTGAGCGACTCCAGGAAGCTAAGCACTCGGAGTTATATATGCAGGTGGATTTGGGCTGTAACTTCTTCGTTGACACAGTGGTCCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333119.7 ENST00000335890.3 |
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| CDS-3UTR CAA 90 bp | AGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCATGGAGTCCTTGGTGGTTGACCGATCCAGTTaGGCCTCACACACAGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: SPSSNMWIWALIFMESLVVDRSS*ASHTVH Trigger: ATGAACTGTGTGTGAGGCCAAACTGGATCGGTCAAC...CACCAAGGACTCCATGAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR CAA 90 bp | CCTTGTAGTTCTCTAAGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCAGGGGGAAGACCATGTaGACCGATCCAGTTTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: PCSSLSPSSNMWIWALIFRGKTM*TDPVWP Trigger: AGGCCAAACTGGATCGGTCAACATGGTCTTCCCCCT...GAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCTTAGAGAACTACAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR CAA 90 bp | AGTTCTCTAAGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCATGGAGAGCTGCTCATATACCTaGTCTCGATGGTCCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: SSLSPSSNMWIWALIFMESCSYT*SRWSST Trigger: GGTGCTGGACCATCGAGACAAGGTATATGAGCAGCT...CTCCATGAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCTTAGAGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR CAA 90 bp | AGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCATGGAGTCCTTGGTGTTACGATCAATGAACTaGAGAGCTTCTGCCAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: SPSSNMWIWALIFMESLVLRSMN*RASASV Trigger: GACACTGGCAGAAGCTCTCAAGTTCATTGATCGTAA...CACCAAGGACTCCATGAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR CAA 90 bp | CCTTGTAGTTCTCTAAGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCATATTCATGGAGTCCTaGGTGAGGCTGTTGCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: PCSSLSPSSNMWIWALIFIFMES*VRLLLS Trigger: GCTCAGCAACAGCCTCACCAAGGACTCCATGAATAT...GAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCTTAGAGAACTACAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS TCA 90 bp | AATCCCATAGTCTTTACCTGGAGTCGCTCAATGACATTTCTCAGTTaGAGGTATTTGGCCAGCTGCTCATATACCTTGTCTCGATGGTCC | + |
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Preference number: 5 (lower is better) Translates to: NPIVFTWSRSMTFLS*RYLASCSYTLSRWS Trigger: GGACCATCGAGACAAGGTATATGAGCAGCTGGCCAAATACCTTCAACTGAGAAATGTCATTGAGCGACTCCAGGTAAAGACTATGGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376964.3 |
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| CDS-3UTR CAA 90 bp | AGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCATGGAGTCCTTGGTGATGTGGATATGGGCTTaGATATTCATGGAGTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SPSSNMWIWALIFMESLVMWIWA*IFMESL Trigger: CAAGGACTCCATGAATATCAAAGCCCATATCCACAT...CACCAAGGACTCCATGAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS-3UTR CAA 90 bp | CCTTGTAGTTCTCTAAGCCCCTCTAGCAACATGTGGATATGGGCTTTGATATTCAATGACATTTCTCAGTaGAAGGTATTTGGCCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: PCSSLSPSSNMWIWALIFNDISQ*KVFGQL Trigger: CAGCTGGCCAAATACCTTCAACTGAGAAATGTCATT...GAATATCAAAGCCCATATCCACATGTTGCTAGAGGGGCTTAGAGAACTACAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485641.5 |
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| CDS CCA 90 bp | AGAGTGTTGGAAATGGTGGTGTTTTTACACACTATCCTCATGGAATaGACTTACTCTGTGAGGAGAGAGCTCTTACGATCAATGAACTTG | + |
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Preference number: 5 (lower is better) Translates to: RVLEMVVFLHTILME*TYSVRRELLRSMNL Trigger: CAAGTTCATTGATCGTAAGAGCTCTCTCCTCACAGAGTAAGTCCATTCCATGAGGATAGTGTGTAAAAACACCACCATTTCCAACACTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376964.3 |
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| CDS CCA 72 bp | CTCTCAACGCTGGGAATCGGCTTGTCCGGCTCAAGCTaGAGGTTCAGCCTTCCGCCCCTCCCAACTCGGGGA | + |
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Preference number: 6 (lower is better) Translates to: LSTLGIGLSGSS*RFSLPPLPTRG Trigger: TCCCCGAGTTGGGAGGGGCGGAAGGCTGAACCTCCAGCTTGAGCCGGACAAGCCGATTCCCAGCGTTGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335890.3 ENST00000485641.5 |
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| CDS CAA 72 bp | CAGTTCATCTCTACCCTCTCAACGCTGGGAATCGGCTaGTCCGGCTCAAGCTGGAGGTTCAGCCTTCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: QFISTLSTLGIG*SGSSWRFSLPP Trigger: GGGCGGAAGGCTGAACCTCCAGCTTGAGCCGGACAAGCCGATTCCCAGCGTTGAGAGGGTAGAGATGAACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335890.3 ENST00000485641.5 |
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| CDS CAA 90 bp | CCTCACACACAGTTCATCTCTACCCTCTCAACGCTGGGAATCGGCTaGTCCGGCTCAAGCTGGAGGTTCAGCCTTCCGCCCCTCCCAACT | + |
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Preference number: 6 (lower is better) Translates to: PHTQFISTLSTLGIG*SGSSWRFSLPPLPT Trigger: AGTTGGGAGGGGCGGAAGGCTGAACCTCCAGCTTGAGCCGGACAAGCCGATTCCCAGCGTTGAGAGGGTAGAGATGAACTGTGTGTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335890.3 ENST00000485641.5 |
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| CDS CCA 72 bp | AGGTATTTGGCCAGCTGCTCATATACCTTGTCTCGATaGTCCAGCACCTTTCGCAAGTCCCGCTGCAGCACG | + |
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Preference number: 6 (lower is better) Translates to: RYLASCSYTLSR*SSTFRKSRCST Trigger: CGTGCTGCAGCGGGACTTGCGAAAGGTGCTGGACCATCGAGACAAGGTATATGAGCAGCTGGCCAAATACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000333119.7 ENST00000335890.3 ENST00000376964.3 ENST00000485641.5 |
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| CDS CCA 72 bp | GTGGGGAGGGGGAAGACCATGTTGACCGATCCAGTTTaGCCTCACACACAGTTCATCTCTACCCTCTCAACG | + |
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Preference number: 6 (lower is better) Translates to: VGRGKTMLTDPV*PHTQFISTLST Trigger: CGTTGAGAGGGTAGAGATGAACTGTGTGTGAGGCCAAACTGGATCGGTCAACATGGTCTTCCCCCTCCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000335890.3 ENST00000485641.5 |
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| CDS CAA 72 bp | AGTGGGGAGGGGGAAGACCATGTTGACCGATCCAGTTaGGCCTCACACACAGTTCATCTCTACCCTCTCAAC | + |
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Preference number: 6 (lower is better) Translates to: SGEGEDHVDRSS*ASHTVHLYPLN Trigger: GTTGAGAGGGTAGAGATGAACTGTGTGTGAGGCCAAACTGGATCGGTCAACATGGTCTTCCCCCTCCCCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000335890.3 ENST00000485641.5 |
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| CDS GCA 72 bp | TTACAGCCCAAATCCACCTGCATATATAACTCCGAGTaGTTAGCTTCCTGTGGGGCCAGGGAAAAAGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: LQPKSTCIYNSE*LASCGAREKEV Trigger: TACCTCTTTTTCCCTGGCCCCACAGGAAGCTAAGCACTCGGAGTTATATATGCAGGTGGATTTGGGCTGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376964.3 |
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| CDS GCA 72 bp | ACTGTGTCAACGAAGAAGTTACAGCCCAAATCCACCTaGATATATAACTCCGAGTGCTTAGCTTCCTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: TVSTKKLQPKST*IYNSECLASCG Trigger: CCCACAGGAAGCTAAGCACTCGGAGTTATATATGCAGGTGGATTTGGGCTGTAACTTCTTCGTTGACACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376964.3 |
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| CDS GCA 72 bp | ACTGTGTCAACGAAGAAGTTACAGCCCAAATCCACCTaGATATATAACTCCGAGTGCTTAGCTTCCTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: TVSTKKLQPKST*IYNSECLASWS Trigger: ACTCCAGGAAGCTAAGCACTCGGAGTTATATATGCAGGTGGATTTGGGCTGTAACTTCTTCGTTGACACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333119.7 ENST00000335890.3 |
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