Pregenerated sensors for UTP6 (Homo sapiens)
Ensembl gene IDs: ENSG00000108651Ensembl transcript IDs: ENST00000261708.9, ENST00000477128.5, ENST00000477860.1, ENST00000583408.5
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGAGAAACATAACTGCCCAAATAGTGTTGGCAAAATTAACTGCTTaGGGAAAAAGAGTTGTTCTCAGCACCAGGAAGAGCTTCCAAAGC | + |
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Preference number: 1 (lower is better) Translates to: ERNITAQIVLAKLTA*GKRVVLSTRKSFQS Trigger: GCTTTGGAAGCTCTTCCTGGTGCTGAGAACAACTCTTTTTCCCCAAGCAGTTAATTTTGCCAACACTATTTGGGCAGTTATGTTTCTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR TCA 90 bp | ATTACACCAGTACAGGTAAGGGTACTGACACTTTCATGTATTGCTTaGAAGAAGGAGCAAACCAGCAATACATATCAGTATTCTCTAAAA | + |
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Preference number: 1 (lower is better) Translates to: ITPVQVRVLTLSCIA*KKEQTSNTYQYSLK Trigger: TTTTAGAGAATACTGATATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACCCTTACCTGTACTGGTGTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR GCA 90 bp | TATAATTACACCAGTACAGGTAAGGGTACTGACACTTTCATGTATTaGTTGAAAGAAGGAGCAAACCAGCAATACATATCAGTATTCTCT | + |
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Preference number: 1 (lower is better) Translates to: YNYTSTGKGTDTFMY*LKEGANQQYISVFS Trigger: AGAGAATACTGATATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACCCTTACCTGTACTGGTGTAATTATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR-3UTR TCA 90 bp | CCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGACTCAGGAGTCTGAGGTaGGAAGGTCACTTGAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: PTQLLGRLSQNHLNPGGGLRSLR*EGHLSP Trigger: TGGACTCAAGTGACCTTCTCACCTCAGACTCCTGAG...TCCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR-3UTR GCA 90 bp | CCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGATTCAAGCAATTCTCCTaGCTCAGCCTCCCAAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: PTQLLGRLSQNHLNPGGGFKQFS*LSLPSS Trigger: GCTGCTTGGGAGGCTGAGGCAGGAGAATTGCTTGAA...TCCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR-3UTR GCA 90 bp | TTAACTGCTTGGGGAAAAAGAGTTGTTCTCAGCACCAGGAAGAGCTTCCAAAGCCCGGGAGGTGGAGGTTaGAGTGAGCCGAGATGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LTAWGKRVVLSTRKSFQSPGGGG*SEPRWS Trigger: GCTCCATCTCGGCTCACTGCAACCTCCACCTCCCGG...GCTTTGGAAGCTCTTCCTGGTGCTGAGAACAACTCTTTTTCCCCAAGCAGTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR-3UTR GCA 90 bp | TTAACTGCTTGGGGAAAAAGAGTTGTTCTCAGCACCAGGAAGAGCTTCCAAAGCGGCGTTGAGTCACCATaGCTGGCCACTTTCTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LTAWGKRVVLSTRKSFQSGVESP*LATFSF Trigger: GAAGGAGAAAGTGGCCAGGCATGGTGACTCAACGCC...GCTTTGGAAGCTCTTCCTGGTGCTGAGAACAACTCTTTTTCCCCAAGCAGTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR-3UTR CCA 90 bp | TTAACTGCTTGGGGAAAAAGAGTTGTTCTCAGCACCAGGAAGAGCTTCCAAAGCAATACAAAAATTGGCTaGGCGCGGTGGCGGGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: LTAWGKRVVLSTRKSFQSNTKIG*ARWRVP Trigger: AGGCACCCGCCACCGCGCCCAGCCAATTTTTGTATT...GCTTTGGAAGCTCTTCCTGGTGCTGAGAACAACTCTTTTTCCCCAAGCAGTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR-3UTR TCA 90 bp | TTAACTGCTTGGGGAAAAAGAGTTGTTCTCAGCACCAGGAAGAGCTTCCAAAGCGGTGAGAAGGTCACTTaGGTCCAGGAGTTCAAGACC | + |
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Preference number: 2 (lower is better) Translates to: LTAWGKRVVLSTRKSFQSGEKVT*VQEFKT Trigger: GGTCTTGAACTCCTGGACTCAAGTGACCTTCTCACC...GCTTTGGAAGCTCTTCCTGGTGCTGAGAACAACTCTTTTTCCCCAAGCAGTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR-3UTR TCA 90 bp | GGTACTGACACTTTCATGTATTGCTTGAAAGAAGGAGCAAACCAGCAATACATAAAGGCGGGTGGATCATaGGGTCAGGAGTTCGCAACC | + |
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Preference number: 2 (lower is better) Translates to: GTDTFMYCLKEGANQQYIKAGGS*GQEFAT Trigger: GGTTGCGAACTCCTGACCTCATGATCCACCCGCCTT...TATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR-3UTR TCA 90 bp | TTAACTGCTTGGGGAAAAAGAGTTGTTCTCAGCACCAGGAAGAGCTTCCAAAGCAAATGGCCAGGGATGTaGACAAAGATTGACAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: LTAWGKRVVLSTRKSFQSKWPGM*TKIDKN Trigger: ATTCTTGTCAATCTTTGTTCACATCCCTGGCCATTT...GCTTTGGAAGCTCTTCCTGGTGCTGAGAACAACTCTTTTTCCCCAAGCAGTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR-3UTR GCA 90 bp | GGTACTGACACTTTCATGTATTGCTTGAAAGAAGGAGCAAACCAGCAATACATAGACTCAATACAAATTTaGCCACGGGGCTTGCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: GTDTFMYCLKEGANQQYIDSIQI*PRGLLA Trigger: TGCAAGCAAGCCCCGTGGGCAAATTTGTATTGAGTC...TATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR-3UTR CCA 90 bp | TATTGCTTGAAAGAAGGAGCAAACCAGCAATACATATCAGTATTCTCTAAAAGCTTGAGTCACCATGCCTaGCCACTTTCTCCTTCATTT | + |
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Preference number: 2 (lower is better) Translates to: YCLKEGANQQYISVFSKSLSHHA*PLSPSF Trigger: AAATGAAGGAGAAAGTGGCCAGGCATGGTGACTCAA...GCTTTTAGAGAATACTGATATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR-3UTR TCA 90 bp | TATTGCTTGAAAGAAGGAGCAAACCAGCAATACATATCAGTATTCTCTAAAAGCAACAATAAGCTACACTaGAAGCTTCTCCCAGTGACA | + |
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Preference number: 2 (lower is better) Translates to: YCLKEGANQQYISVFSKSNNKLH*KLLPVT Trigger: TGTCACTGGGAGAAGCTTTCAGTGTAGCTTATTGTT...GCTTTTAGAGAATACTGATATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR-3UTR CCA 90 bp | GGTACTGACACTTTCATGTATTGCTTGAAAGAAGGAGCAAACCAGCAATACATAAGCAATTCTCTTTACTaGAATCAGATTAGCACATCA | + |
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Preference number: 2 (lower is better) Translates to: GTDTFMYCLKEGANQQYISNSLY*NQISTS Trigger: TGATGTGCTAATCTGATTCCAGTAAAGAGAATTGCT...TATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR-3UTR CAA 90 bp | TCCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGGCCCACGGGGCTTGCTaGCAATACTATTTCACAAAG | + |
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Preference number: 3 (lower is better) Translates to: SHPAAREAEPEPLEPGRWAHGAC*QYYFTK Trigger: CTTTGTGAAATAGTATTGCAAGCAAGCCCCGTGGGC...CCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR-3UTR CAA 90 bp | TTAACTGCTTGGGGAAAAAGAGTTGTTCTCAGCACCAGGAAGAGCTTCCAAAGCTATAATCCCAGCTACTaGGGAGGCTTTGGCAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: LTAWGKRVVLSTRKSFQSYNPSY*GGFGRE Trigger: CTCCCTGCCAAAGCCTCCCAAGTAGCTGGGATTATA...GCTTTGGAAGCTCTTCCTGGTGCTGAGAACAACTCTTTTTCCCCAAGCAGTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR-3UTR CAA 90 bp | GGTACTGACACTTTCATGTATTGCTTGAAAGAAGGAGCAAACCAGCAATACATACGGGGTTTCACCATGTaGGCCAGGCTAGTCTCAAAC | + |
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Preference number: 3 (lower is better) Translates to: GTDTFMYCLKEGANQQYIRGFTM*ARLVSN Trigger: GTTTGAGACTAGCCTGGCCAACATGGTGAAACCCCG...TATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR-3UTR CAA 90 bp | GGTACTGACACTTTCATGTATTGCTTGAAAGAAGGAGCAAACCAGCAATACATAGGACTCAATACAAATTaGCCCACGGGGCTTGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: GTDTFMYCLKEGANQQYIGLNTN*PTGLAC Trigger: GCAAGCAAGCCCCGTGGGCAAATTTGTATTGAGTCC...TATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR-3UTR CAA 90 bp | GGTACTGACACTTTCATGTATTGCTTGAAAGAAGGAGCAAACCAGCAATACATACTAAAAATACAAAAATaGGCTGGGCGCGGTGGCGGG | + |
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Preference number: 3 (lower is better) Translates to: GTDTFMYCLKEGANQQYILKIQK*AGRGGG Trigger: CCCGCCACCGCGCCCAGCCAATTTTTGTATTTTTAG...TATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR TCA 72 bp | TCGGATGTCAATCTCCTAAGGAAATGGCCAGGGATGTaGACAAAGATTGACAAGAATCTTCATCAACAGCAT | + |
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Preference number: 3 (lower is better) Translates to: SDVNLLRKWPGM*TKIDKNLHQQH Trigger: ATGCTGTTGATGAAGATTCTTGTCAATCTTTGTTCACATCCCTGGCCATTTCCTTAGGAGATTGACATCCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR-3UTR CAA 90 bp | ACCAGTACAGGTAAGGGTACTGACACTTTCATGTATTGCTTGAAAGAAGGAGCAGGATGTGAACAAAGATaGACAAGAATCTTCATCAAC | + |
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Preference number: 3 (lower is better) Translates to: TSTGKGTDTFMYCLKEGAGCEQR*TRIFIN Trigger: GTTGATGAAGATTCTTGTCAATCTTTGTTCACATCC...TGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACCCTTACCTGTACTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR GCA 72 bp | ACCAGTACAGGTAAGGGTACTGACACTTTCATGTATTaGTTGAAAGAAGGAGCAAACCAGCAATACATATCA | + |
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Preference number: 3 (lower is better) Translates to: TSTGKGTDTFMY*LKEGANQQYIS Trigger: TGATATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACCCTTACCTGTACTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| 3UTR TCA 72 bp | GTACAGGTAAGGGTACTGACACTTTCATGTATTGCTTaGAAGAAGGAGCAAACCAGCAATACATATCAGTAT | + |
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Preference number: 3 (lower is better) Translates to: VQVRVLTLSCIA*KKEQTSNTYQY Trigger: ATACTGATATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACCCTTACCTGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR TCA 90 bp | TCCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGAAGGCGGGTGGATCATaGGGTCAGGAGTTCGCAACC | + |
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Preference number: 4 (lower is better) Translates to: SHPAAREAEPEPLEPGRWKAGGS*GQEFAT Trigger: GGTTGCGAACTCCTGACCTCATGATCCACCCGCCTT...CCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR GCA 90 bp | CCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGACCGGCCGACCTCCACTaGTTTGGCTTGTTTCGTTGT | + |
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Preference number: 4 (lower is better) Translates to: PTQLLGRLSQNHLNPGGGPADLH*FGLFRC Trigger: ACAACGAAACAAGCCAAAGCAGTGGAGGTCGGCCGG...TCCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR GCA 90 bp | TCCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGGTAAGACCACACCACTaGACTCCAGCCTGGACCACA | + |
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Preference number: 4 (lower is better) Translates to: SHPAAREAEPEPLEPGRWVRPHH*TPAWTT Trigger: TGTGGTCCAGGCTGGAGTGCAGTGGTGTGGTCTTAC...CCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR CCA 90 bp | CCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGACCACATGGCCTCTGTTaGCAGAGTCTTCACTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PTQLLGRLSQNHLNPGGGPHGLC*QSLHCL Trigger: GAGGCAGTGAAGACTCTGCCAACAGAGGCCATGTGG...TCCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR TCA 90 bp | CCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGAGGTGAGAAGGTCACTTaGGTCCAGGAGTTCAAGACC | + |
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Preference number: 4 (lower is better) Translates to: PTQLLGRLSQNHLNPGGGGEKVT*VQEFKT Trigger: GGTCTTGAACTCCTGGACTCAAGTGACCTTCTCACC...TCCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR GCA 90 bp | CCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGATTCAGTTCCAGCTACTaGCACTTCCAGAGCTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: PTQLLGRLSQNHLNPGGGFSSSY*HFQSFP Trigger: AGGGAAGCTCTGGAAGTGGCAGTAGCTGGAACTGAA...TCCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR CCA 90 bp | CCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGAATAATCCCAGCTACTTaGGAGGCTTTGGCAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: PTQLLGRLSQNHLNPGGGIIPAT*EALAGR Trigger: TCTCCCTGCCAAAGCCTCCCAAGTAGCTGGGATTAT...TCCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR GCA 90 bp | TCCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGGACTCAATACAAATTTaGCCACGGGGCTTGCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: SHPAAREAEPEPLEPGRWDSIQI*PRGLLA Trigger: TGCAAGCAAGCCCCGTGGGCAAATTTGTATTGAGTC...CCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR CCA 90 bp | TCCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGTGTAACACTTCCACATaGCCTCTGTTGGCAGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: SHPAAREAEPEPLEPGRWCNTST*PLLAES Trigger: AGACTCTGCCAACAGAGGCCATGTGGAAGTGTTACA...CCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR CCA 90 bp | TCCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGAATGGCAGACAAACCTaGGGTTTCAGGTGCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: SHPAAREAEPEPLEPGRWNGRQT*GFRCTK Trigger: CTTTGTGCACCTGAAACCCCAGGTTTGTCTGCCATT...CCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR GCA 90 bp | CCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGATGTTTCGTTGTAGGCTaGTCTTCTGTCTGTGACTCA | + |
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Preference number: 4 (lower is better) Translates to: PTQLLGRLSQNHLNPGGGCFVVG*SSVCDS Trigger: TGAGTCACAGACAGAAGAGCAGCCTACAACGAAACA...TCCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR TCA 90 bp | CCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGAAAAAGCAGTATCCTTTaGTCCAGTAATTCCACTGTC | + |
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Preference number: 4 (lower is better) Translates to: PTQLLGRLSQNHLNPGGGKSSIL*SSNSTV Trigger: GACAGTGGAATTACTGGATCAAAGGATACTGCTTTT...TCCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR GCA 90 bp | CCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGAGACACTTTCATGTATTaGTTGAAAGAAGGAGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: PTQLLGRLSQNHLNPGGGDTFMY*LKEGAN Trigger: GTTTGCTCCTTCTTTCAAGCAATACATGAAAGTGTC...TCCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR CCA 90 bp | CCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGAAAAAGGGTTCTTCTCTaGATTTTGTACTCTAGATCG | + |
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Preference number: 4 (lower is better) Translates to: PTQLLGRLSQNHLNPGGGKRVLL*ILYSRS Trigger: CGATCTAGAGTACAAAATCCAGAGAAGAACCCTTTT...TCCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR CCA 90 bp | CCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGAAGCAATTCTCTTTACTaGAATCAGATTAGCACATCA | + |
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Preference number: 4 (lower is better) Translates to: PTQLLGRLSQNHLNPGGGSNSLY*NQISTS Trigger: TGATGTGCTAATCTGATTCCAGTAAAGAGAATTGCT...TCCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR GCA 90 bp | ACCAGTACAGGTAAGGGTACTGACACTTTCATGTATTGCTTGAAAGAAGGAGCACCGGGAGGTGGAGGTTaGAGTGAGCCGAGATGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TSTGKGTDTFMYCLKEGAPGGGG*SEPRWS Trigger: GCTCCATCTCGGCTCACTGCAACCTCCACCTCCCGG...TGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACCCTTACCTGTACTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR GCA 90 bp | TTAACTGCTTGGGGAAAAAGAGTTGTTCTCAGCACCAGGAAGAGCTTCCAAAGCGACTCGATCAGCACCTaGAGCTTCAGCTGCCACATT | + |
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Preference number: 4 (lower is better) Translates to: LTAWGKRVVLSTRKSFQSDSIST*SFSCHI Trigger: AATGTGGCAGCTGAAGCTGCAGGTGCTGATCGAGTC...GCTTTGGAAGCTCTTCCTGGTGCTGAGAACAACTCTTTTTCCCCAAGCAGTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR TCA 90 bp | ACCAGTACAGGTAAGGGTACTGACACTTTCATGTATTGCTTGAAAGAAGGAGCAGGTGGGAGGATCTCTTaGGCCCAGAAGTTAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TSTGKGTDTFMYCLKEGAGGRIS*AQKLRL Trigger: CAGCCTTAACTTCTGGGCTCAAGAGATCCTCCCACC...TGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACCCTTACCTGTACTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR TCA 90 bp | ACCAGTACAGGTAAGGGTACTGACACTTTCATGTATTGCTTGAAAGAAGGAGCAGTCTTTCCATTTTGCTaGGGCACGCTGGAAAACACC | + |
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Preference number: 4 (lower is better) Translates to: TSTGKGTDTFMYCLKEGAVFPFC*GTLENT Trigger: GGTGTTTTCCAGCGTGCCTCAGCAAAATGGAAAGAC...TGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACCCTTACCTGTACTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR TCA 90 bp | TTAACTGCTTGGGGAAAAAGAGTTGTTCTCAGCACCAGGAAGAGCTTCCAAAGCTTGCCTTGCGCTTTCTaGAGACAATCGATCTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LTAWGKRVVLSTRKSFQSLPCAF*RQSIFH Trigger: ATGGAAGATCGATTGTCTTCAGAAAGCGCAAGGCAA...GCTTTGGAAGCTCTTCCTGGTGCTGAGAACAACTCTTTTTCCCCAAGCAGTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR GCA 90 bp | TTAACTGCTTGGGGAAAAAGAGTTGTTCTCAGCACCAGGAAGAGCTTCCAAAGCACCTGGGGTTTCAGGTaGACAAAGGCTTCTTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: LTAWGKRVVLSTRKSFQSTWGFR*TKASSK Trigger: TTTTGAAGAAGCCTTTGTGCACCTGAAACCCCAGGT...GCTTTGGAAGCTCTTCCTGGTGCTGAGAACAACTCTTTTTCCCCAAGCAGTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR GCA 90 bp | GGTACTGACACTTTCATGTATTGCTTGAAAGAAGGAGCAAACCAGCAATACATAGGCGTTGAGTCACCATaGCTGGCCACTTTCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: GTDTFMYCLKEGANQQYIGVESP*LATFSF Trigger: GAAGGAGAAAGTGGCCAGGCATGGTGACTCAACGCC...TATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR CCA 90 bp | GGTACTGACACTTTCATGTATTGCTTGAAAGAAGGAGCAAACCAGCAATACATAAATACAAAAATTGGCTaGGCGCGGTGGCGGGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: GTDTFMYCLKEGANQQYINTKIG*ARWRVP Trigger: AGGCACCCGCCACCGCGCCCAGCCAATTTTTGTATT...TATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR CCA 90 bp | TTAACTGCTTGGGGAAAAAGAGTTGTTCTCAGCACCAGGAAGAGCTTCCAAAGCATAATACCAGCACTTTaGGAGGTTGAGGTAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LTAWGKRVVLSTRKSFQSIIPAL*EVEVGG Trigger: TCCTCCTACCTCAACCTCCCAAAGTGCTGGTATTAT...GCTTTGGAAGCTCTTCCTGGTGCTGAGAACAACTCTTTTTCCCCAAGCAGTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR TCA 90 bp | TTAACTGCTTGGGGAAAAAGAGTTGTTCTCAGCACCAGGAAGAGCTTCCAAAGCCTTTCATGTATTGCTTaGAAGAAGGAGCAAACCAGC | + |
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Preference number: 4 (lower is better) Translates to: LTAWGKRVVLSTRKSFQSLSCIA*KKEQTS Trigger: GCTGGTTTGCTCCTTCTTTCAAGCAATACATGAAAG...GCTTTGGAAGCTCTTCCTGGTGCTGAGAACAACTCTTTTTCCCCAAGCAGTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR CCA 90 bp | ACCAGTACAGGTAAGGGTACTGACACTTTCATGTATTGCTTGAAAGAAGGAGCACTACTTGGGAGGCTTTaGCAGGGAGAACTGTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: TSTGKGTDTFMYCLKEGALLGRL*QGELFE Trigger: TTCAAACAGTTCTCCCTGCCAAAGCCTCCCAAGTAG...TGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACCCTTACCTGTACTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR TCA 90 bp | TATTGCTTGAAAGAAGGAGCAAACCAGCAATACATATCAGTATTCTCTAAAAGCTTTGGGCACTCTGGATaGAAGCGCAGTGCGCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: YCLKEGANQQYISVFSKSFGHSG*KRSARR Trigger: TCTTCGCGCACTGCGCTTTCATCCAGAGTGCCCAAA...GCTTTTAGAGAATACTGATATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR CCA 90 bp | TATTGCTTGAAAGAAGGAGCAAACCAGCAATACATATCAGTATTCTCTAAAAGCCTCAAGAGGCTGAGGTaGGAGGATCTCTTGAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: YCLKEGANQQYISVFSKSLKRLR*EDLLSP Trigger: TGGGCTCAAGAGATCCTCCCACCTCAGCCTCTTGAG...GCTTTTAGAGAATACTGATATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR TCA 90 bp | TATTGCTTGAAAGAAGGAGCAAACCAGCAATACATATCAGTATTCTCTAAAAGCCTCAGGAGTCTGAGGTaGGAAGGTCACTTGAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: YCLKEGANQQYISVFSKSLRSLR*EGHLSP Trigger: TGGACTCAAGTGACCTTCTCACCTCAGACTCCTGAG...GCTTTTAGAGAATACTGATATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR TCA 90 bp | ACCAGTACAGGTAAGGGTACTGACACTTTCATGTATTGCTTGAAAGAAGGAGCAAAATGGCCAGGGATGTaGACAAAGATTGACAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: TSTGKGTDTFMYCLKEGAKWPGM*TKIDKN Trigger: ATTCTTGTCAATCTTTGTTCACATCCCTGGCCATTT...TGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACCCTTACCTGTACTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR GCA 90 bp | ACCAGTACAGGTAAGGGTACTGACACTTTCATGTATTGCTTGAAAGAAGGAGCAAACGAAACACTCAACTaGTTGTATTGGCATTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: TSTGKGTDTFMYCLKEGANETLN*LYWHSD Trigger: GTCAGAATGCCAATACAAGCAGTTGAGTGTTTCGTT...TGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACCCTTACCTGTACTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR TCA 90 bp | TATTGCTTGAAAGAAGGAGCAAACCAGCAATACATATCAGTATTCTCTAAAAGCCAGAATTTTTGTAGATaGTCCATGCCAACTCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: YCLKEGANQQYISVFSKSQNFCR*SMPTRP Trigger: AGGGCGAGTTGGCATGGATCATCTACAAAAATTCTG...GCTTTTAGAGAATACTGATATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR GCA 90 bp | GGTACTGACACTTTCATGTATTGCTTGAAAGAAGGAGCAAACCAGCAATACATAAGAGAGAAACATAACTaGCCAAATAGTGTTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: GTDTFMYCLKEGANQQYIREKHN*PNSVGK Trigger: TTTGCCAACACTATTTGGGCAGTTATGTTTCTCTCT...TATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR CCA 90 bp | TATTGCTTGAAAGAAGGAGCAAACCAGCAATACATATCAGTATTCTCTAAAAGCCACACAAAATACCTCTaGGCATCAAAAATCGCCACA | + |
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Preference number: 4 (lower is better) Translates to: YCLKEGANQQYISVFSKSHTKYL*ASKIAT Trigger: TGTGGCGATTTTTGATGCCCAGAGGTATTTTGTGTG...GCTTTTAGAGAATACTGATATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR CCA 90 bp | TATTGCTTGAAAGAAGGAGCAAACCAGCAATACATATCAGTATTCTCTAAAAGCCATAATCCACAAAGCTaGTTTGTTGGAATGAATCGC | + |
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Preference number: 4 (lower is better) Translates to: YCLKEGANQQYISVFSKSHNPQS*FVGMNR Trigger: GCGATTCATTCCAACAAACCAGCTTTGTGGATTATG...GCTTTTAGAGAATACTGATATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR GCA 90 bp | TATTGCTTGAAAGAAGGAGCAAACCAGCAATACATATCAGTATTCTCTAAAAGCTTATGTTCGCCATATTaGAGGATTCTTGCTCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: YCLKEGANQQYISVFSKSLCSPY*RILAPF Trigger: AAAAGGAGCAAGAATCCTGCAATATGGCGAACATAA...GCTTTTAGAGAATACTGATATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR CAA 90 bp | TCCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGTCCACATGGCCTCTGTaGGCAGAGTCTTCACTGCCT | + |
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Preference number: 5 (lower is better) Translates to: SHPAAREAEPEPLEPGRWSTWPL*AESSLP Trigger: AGGCAGTGAAGACTCTGCCAACAGAGGCCATGTGGA...CCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR CAA 90 bp | CCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGAGGCAGGGAGAACTGTTaGAACCTAGGAGGCAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: PTQLLGRLSQNHLNPGGGGRENC*NLGGRG Trigger: ACCTCTGCCTCCTAGGTTCAAACAGTTCTCCCTGCC...TCCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR CAA 90 bp | TCCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGGAAACACTCAACTGCTaGTATTGGCATTCTGACAGA | + |
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Preference number: 5 (lower is better) Translates to: SHPAAREAEPEPLEPGRWETLNC*YWHSDR Trigger: TCTGTCAGAATGCCAATACAAGCAGTTGAGTGTTTC...CCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR CAA 90 bp | TCCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGACTGCCCAAATAGTGTaGGCAAAATTAACTGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SHPAAREAEPEPLEPGRWTAQIV*AKLTAW Trigger: CCAAGCAGTTAATTTTGCCAACACTATTTGGGCAGT...CCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR CAA 90 bp | TCCCACCCAGCTGCTCGGGAGGCTGAGCCAGAACCACTTGAACCCGGGAGGTGGACTTTCATGTATTGCTaGAAAGAAGGAGCAAACCAG | + |
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Preference number: 5 (lower is better) Translates to: SHPAAREAEPEPLEPGRWTFMYC*KEGANQ Trigger: CTGGTTTGCTCCTTCTTTCAAGCAATACATGAAAGT...CCACCTCCCGGGTTCAAGTGGTTCTGGCTCAGCCTCCCGAGCAGCTGGGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR CAA 90 bp | TTAACTGCTTGGGGAAAAAGAGTTGTTCTCAGCACCAGGAAGAGCTTCCAAAGCCTAAAAATACAAAAATaGGCTGGGCGCGGTGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: LTAWGKRVVLSTRKSFQSLKIQK*AGRGGG Trigger: CCCGCCACCGCGCCCAGCCAATTTTTGTATTTTTAG...GCTTTGGAAGCTCTTCCTGGTGCTGAGAACAACTCTTTTTCCCCAAGCAGTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS TCA 90 bp | GGCCATGAATTCCTGCACTCAAGTGATCCCCTTGCCTCAGCTTCCTaGGTAGCTAGGATTAGAGGTGCATTCCATCACACTCAGATAATT | + |
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Preference number: 5 (lower is better) Translates to: GHEFLHSSDPLASAS*VARIRGAFHHTQII Trigger: AATTATCTGAGTGTGATGGAATGCACCTCTAATCCTAGCTACTCAGGAAGCTGAGGCAAGGGGATCACTTGAGTGCAGGAATTCATGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477128.5 |
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| CDS-3UTR CAA 90 bp | ACCAGTACAGGTAAGGGTACTGACACTTTCATGTATTGCTTGAAAGAAGGAGCAGGACTCAATACAAATTaGCCCACGGGGCTTGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: TSTGKGTDTFMYCLKEGAGLNTN*PTGLAC Trigger: GCAAGCAAGCCCCGTGGGCAAATTTGTATTGAGTCC...TGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACCCTTACCTGTACTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS-3UTR CAA 90 bp | TTAACTGCTTGGGGAAAAAGAGTTGTTCTCAGCACCAGGAAGAGCTTCCAAAGCCTTGGGGAAAAAGAGTaGTTCTCAGCACCAGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: LTAWGKRVVLSTRKSFQSLGEKE*FSAPGR Trigger: TCTTCCTGGTGCTGAGAACAACTCTTTTTCCCCAAG...GCTTTGGAAGCTCTTCCTGGTGCTGAGAACAACTCTTTTTCCCCAAGCAGTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS TCA 90 bp | AGATTACTCCCTCAGATGCTATCTGTGATTCAAATAATCTGGGTATaGGCGGCTGAGCATGGGGTAGAGGGACTAGTAACAACTATGAAC | + |
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Preference number: 5 (lower is better) Translates to: RLLPQMLSVIQIIWV*AAEHGVEGLVTTMN Trigger: GTTCATAGTTGTTACTAGTCCCTCTACCCCATGCTCAGCCGCTCATACCCAGATTATTTGAATCACAGATAGCATCTGAGGGAGTAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477860.1 |
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| CDS-3UTR CAA 90 bp | ACCAGTACAGGTAAGGGTACTGACACTTTCATGTATTGCTTGAAAGAAGGAGCAGTTGAGGTAGGAGGATaGTTTGAGCCCAACTGTTTA | + |
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Preference number: 5 (lower is better) Translates to: TSTGKGTDTFMYCLKEGAVEVGG*FEPNCL Trigger: TAAACAGTTGGGCTCAAACAATCCTCCTACCTCAAC...TGCTCCTTCTTTCAAGCAATACATGAAAGTGTCAGTACCCTTACCTGTACTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS CCA 90 bp | CTTAAGTTTCACAATCAGGGATACTATTCCTTCTATATCACACCATaGTTTGGTGAAGTTCACCTGTTGGCAGAGTCTTCACTGCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: LKFHNQGYYSFYITP*FGEVHLLAESSLPL Trigger: AAGAGGCAGTGAAGACTCTGCCAACAGGTGAACTTCACCAAACCATGGTGTGATATAGAAGGAATAGTATCCCTGATTGTGAAACTTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583408.5 |
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| CDS-3UTR CAA 90 bp | TATTGCTTGAAAGAAGGAGCAAACCAGCAATACATATCAGTATTCTCTAAAAGCGCCCACGGGGCTTGCTaGCAATACTATTTCACAAAG | + |
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Preference number: 5 (lower is better) Translates to: YCLKEGANQQYISVFSKSAHGAC*QYYFTK Trigger: CTTTGTGAAATAGTATTGCAAGCAAGCCCCGTGGGC...GCTTTTAGAGAATACTGATATGTATTGCTGGTTTGCTCCTTCTTTCAAGCAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261708.9 |
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| CDS TCA 72 bp | GGAGAATCGTTTGAACCCCGGGCGTGGAGGTTGCAGTaGGCCAAGAACACACCATTGCACTCCTGCCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: GESFEPRAWRLQ*AKNTPLHSCLS Trigger: GCTCAGGCAGGAGTGCAATGGTGTGTTCTTGGCTCACTGCAACCTCCACGCCCGGGGTTCAAACGATTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477128.5 |
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| CDS TCA 72 bp | CCTCAGATGCTATCTGTGATTCAAATAATCTGGGTATaGGCGGCTGAGCATGGGGTAGAGGGACTAGTAACA | + |
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Preference number: 6 (lower is better) Translates to: PQMLSVIQIIWV*AAEHGVEGLVT Trigger: TGTTACTAGTCCCTCTACCCCATGCTCAGCCGCTCATACCCAGATTATTTGAATCACAGATAGCATCTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477860.1 |
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| CDS TCA 72 bp | GGGATACTATTCCTTCTATATCACACCATGGTTTGGTaGAGTTCACCTGTTGGCAGAGTCTTCACTGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GILFLLYHTMVW*SSPVGRVFTAS Trigger: AGAGGCAGTGAAGACTCTGCCAACAGGTGAACTTCACCAAACCATGGTGTGATATAGAAGGAATAGTATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583408.5 |
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| CDS CAA 72 bp | ATCAGGGATACTATTCCTTCTATATCACACCATGGTTaGGTGAAGTTCACCTGTTGGCAGAGTCTTCACTGC | + |
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Preference number: 6 (lower is better) Translates to: IRDTIPSISHHG*VKFTCWQSLHC Trigger: GCAGTGAAGACTCTGCCAACAGGTGAACTTCACCAAACCATGGTGTGATATAGAAGGAATAGTATCCCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583408.5 |
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| CDS CCA 72 bp | CACAATCAGGGATACTATTCCTTCTATATCACACCATaGTTTGGTGAAGTTCACCTGTTGGCAGAGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: HNQGYYSFYITP*FGEVHLLAESS Trigger: TGAAGACTCTGCCAACAGGTGAACTTCACCAAACCATGGTGTGATATAGAAGGAATAGTATCCCTGATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583408.5 |
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