Pregenerated sensors for UTP11 (Homo sapiens)
Ensembl gene IDs: ENSG00000183520Ensembl transcript IDs: ENST00000373014.5, ENST00000483182.5, ENST00000486563.1, ENST00000488453.1
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACGGTGGGAGGATCGCTTaGGGCCACGAGTTCAAAACC | + |
|
Preference number: 2 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHGGRIA*GHEFKT Trigger: GGTTTTGAACTCGTGGCCTCAAGCGATCCTCCCACC...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| 3UTR-3UTR CCA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACAGTTCAAAACCAGCCTaGCCAACATGGCAAAACCTG | + |
|
Preference number: 2 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHSSKPA*PTWQNL Trigger: CAGGTTTTGCCATGTTGGCCAGGCTGGTTTTGAACT...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| 3UTR-3UTR TCA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACAGTTCAAAGTTGCAGTaGGCCATAATCACACACTGC | + |
|
Preference number: 2 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHSSKLQ*AIITHC Trigger: GCAGTGTGTGATTATGGCTCACTGCAACTTTGAACT...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| 3UTR-3UTR CCA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACAACATTACTCAGACATaGTGGCACATGTCTGTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHNITQT*WHMSVV Trigger: GACCACAGACATGTGCCACCATGTCTGAGTAATGTT...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| 3UTR-3UTR TCA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACACGACAACAGATTTTTaGTACAGAATGACAAGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHTTTDF*YRMTRL Trigger: AAGCCTTGTCATTCTGTATCAAAAATCTGTTGTCGT...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| 3UTR GCA 72 bp | AGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTaGAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RQENGVNPGSGA*SEPRLRHCSPQ Trigger: CTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| CDS-3UTR GCA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACACGCCGGATCCGCACTaGCTCTGCCGCCAAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHTPDPH*LCRQVH Trigger: GTGGACTTGGCGGCAGAGGCAGTGCGGATCCGGCGT...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| CDS-3UTR GCA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACTCTCTGTGTTCCCGCTaGCGGGACTTAGCCGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHSLCSR*RDLAAF Trigger: GAAGGCGGCTAAGTCCCGGCAGCGGGAACACAGAGA...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| CDS-3UTR TCA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACGGGGCTGTTTGCAGGTaGGTTGCGACATCAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHGAVCR*VATSNC Trigger: ACAGTTTGATGTCGCAACTCACCTGCAAACAGCCCC...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| CDS-3UTR CCA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACCTTGGAAAAGATCAGTaGAGAACGCCGGATCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHLGKDQ*RTPDPH Trigger: GTGCGGATCCGGCGTTCTCCACTGATCTTTTCCAAG...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| CDS-3UTR CCA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACTTTCGAAAGCCAGGCTaGCTTCGCTCTCTGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHFRKPG*LRSLCS Trigger: GGAACACAGAGAGCGAAGCCAGCCTGGCTTTCGAAA...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| CDS-3UTR CCA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACTTCTGTTGCTTCCCCTaGAAATCCAGCAGATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHFCCFP*KSSRWS Trigger: GCTCCATCTGCTGGATTTCCAGGGGAAGCAACAGAA...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| CDS-3UTR GCA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACACATGCTTGTTCTGTTaGTTCCCCTGGAAATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHTCLFC*FPWKSS Trigger: GCTGGATTTCCAGGGGAAGCAACAGAACAAGCATGT...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| CDS-3UTR TCA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACCGCTTAAGTCCAGTCTaGTTGGTAACTCCTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHRLSPV*LVTPFT Trigger: AGTGAAAGGAGTTACCAATCAGACTGGACTTAAGCG...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| CDS-3UTR GCA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACTGTTTGCAGGTGAGTTaGGACATCAAACTGTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHCLQVS*DIKLFN Trigger: GTTGAACAGTTTGATGTCGCAACTCACCTGCAAACA...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| CDS-3UTR GCA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACTTCACTTTTTCTTTCTaGAAGGTCTCTATCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHFTFSF*KVSILG Trigger: GCCCAGGATAGAGACCTTGCAGAAAGAAAAAGTGAA...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| CDS-3UTR CCA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACATGTCTGTACAGCCTTaGAAAAGATCAGTGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHMSVQP*KRSVEN Trigger: GTTCTCCACTGATCTTTTCCAAGGCTGTACAGACAT...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| CDS-3UTR GCA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACGTCAGGCAGTTATACTaGTTTTGCCTTTCTTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHVRQLY*FCLSLA Trigger: AGCTAAAGAAAGGCAAAAGCAGTATAACTGCCTGAC...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| CDS-3UTR CCA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACATATGTACTCCATCCTaGAGTTTAACCCGAGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHICTPS*SLTRVI Trigger: AATGACTCGGGTTAAACTCCAGGATGGAGTACATAT...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| CDS-3UTR CCA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACTGGAAATCCAGCAGATaGAGCTCTGATTTTAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHWKSSR*SSDFSL Trigger: AAGACTAAAATCAGAGCTCCATCTGCTGGATTTCCA...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| CDS CCA 90 bp | GACTTAGCCGCCTTCCGAAAAGCCGCCGCCATGTCTGTACAGCCTTaGAAAAGATCAGTGGAGAACGCCGGATCCGCACTGCCTCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: DLAAFRKAAAMSVQP*KRSVENAGSALPLP Trigger: CGGCAGAGGCAGTGCGGATCCGGCGTTCTCCACTGATCTTTTCCAAGGCTGTACAGACATGGCGGCGGCTTTTCGGAAGGCGGCTAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373014.5 ENST00000483182.5 ENST00000486563.1 |
||
| CDS GCA 90 bp | GCAGGAAATTATCCCCTGTTGGACACTCAGGCAATTCAGCTGCAGTaGAAGGAGGTTGTAAGCTTTCTTGGCAGCGCCTCTACCAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AGNYPLLDTQAIQLQ*KEVVSFLGSASTRK Trigger: CTTTCTGGTAGAGGCGCTGCCAAGAAAGCTTACAACCTCCTTGCACTGCAGCTGAATTGCCTGAGTGTCCAACAGGGGATAATTTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486563.1 |
||
| CDS-3UTR CAA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACCACATGCTTGTTCTGTaGCTTCCCCTGGAAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHHMLVL*LPLEIQ Trigger: CTGGATTTCCAGGGGAAGCAACAGAACAAGCATGTG...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| CDS-3UTR CAA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACCATGTCTGTACAGCCTaGGAAAAGATCAGTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHHVCTA*EKISGE Trigger: TTCTCCACTGATCTTTTCCAAGGCTGTACAGACATG...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| CDS-3UTR CAA 90 bp | TTTACAAAATGGAGGAAATCAACTAGACTACTCACAGTAATTGTCCACCTCCACGCAGTTATACTGCTTTaGCCTTTCTTTAGCTATTCG | + |
|
Preference number: 5 (lower is better) Translates to: FTKWRKSTRLLTVIVHLHAVILL*PFFSYS Trigger: CGAATAGCTAAAGAAAGGCAAAAGCAGTATAACTGC...GTGGAGGTGGACAATTACTGTGAGTAGTCTAGTTGATTTCCTCCATTTTGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373014.5 |
||
| CDS TCA 72 bp | ACGCCGGATCCGCACTGCCTCTGCCGCCAAGTCCACTaGTTCCTACCGGAAATAGGCCCAAGGCCAGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: TPDPHCLCRQVH*FLPEIGPRPVI Trigger: GATGACTGGCCTTGGGCCTATTTCCGGTAGGAATCAGTGGACTTGGCGGCAGAGGCAGTGCGGATCCGGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483182.5 |
||
| CDS CAA 90 bp | GGACTTAGCCGCCTTCCGAAAAGCCGCCGCCATGTCTGTACAGCCTaGGAAAAGATCAGTGGAGAACGCCGGATCCGCACTGCCTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLSRLPKSRRHVCTA*EKISGERRIRTASA Trigger: GGCAGAGGCAGTGCGGATCCGGCGTTCTCCACTGATCTTTTCCAAGGCTGTACAGACATGGCGGCGGCTTTTCGGAAGGCGGCTAAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373014.5 ENST00000483182.5 ENST00000486563.1 |
||
| CDS CCA 72 bp | GCCTTCCGAAAAGCCGCCGCCATGTCTGTACAGCCTTaGAAAAGATCAGTGGAGAACGCCGGATCCGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: AFRKAAAMSVQP*KRSVENAGSAL Trigger: CAGTGCGGATCCGGCGTTCTCCACTGATCTTTTCCAAGGCTGTACAGACATGGCGGCGGCTTTTCGGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373014.5 ENST00000483182.5 ENST00000486563.1 |
||
| CDS CAA 72 bp | CGCCTTCCGAAAAGCCGCCGCCATGTCTGTACAGCCTaGGAAAAGATCAGTGGAGAACGCCGGATCCGCACT | + |
|
Preference number: 6 (lower is better) Translates to: RLPKSRRHVCTA*EKISGERRIRT Trigger: AGTGCGGATCCGGCGTTCTCCACTGATCTTTTCCAAGGCTGTACAGACATGGCGGCGGCTTTTCGGAAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373014.5 ENST00000483182.5 ENST00000486563.1 |
||
| CDS TCA 72 bp | AAAAGCACTGACTGGATCTGGACACTCCACTGTCACTaGGCTGAGCTCATGTCTTCGCAGGGTCCACAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: KSTDWIWTLHCH*AELMSSQGPQS Trigger: AGACTGTGGACCCTGCGAAGACATGAGCTCAGCTCAGTGACAGTGGAGTGTCCAGATCCAGTCAGTGCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488453.1 |
||
| CDS GCA 72 bp | TATCCCCTGTTGGACACTCAGGCAATTCAGCTGCAGTaGAAGGAGGTTGTAAGCTTTCTTGGCAGCGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: YPLLDTQAIQLQ*KEVVSFLGSAS Trigger: AGAGGCGCTGCCAAGAAAGCTTACAACCTCCTTGCACTGCAGCTGAATTGCCTGAGTGTCCAACAGGGGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486563.1 |
||
| CDS CAA 90 bp | GCCAGAGCTTTGGCCATTTTATCAATGGCAGGAAATTATCCCCTGTaGGACACTCAGGCAATTCAGCTGCAGTGCAAGGAGGTTGTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: ARALAILSMAGNYPL*DTQAIQLQCKEVVS Trigger: GCTTACAACCTCCTTGCACTGCAGCTGAATTGCCTGAGTGTCCAACAGGGGATAATTTCCTGCCATTGATAAAATGGCCAAAGCTCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486563.1 |
||
| CDS TCA 72 bp | AAGACTCTGTCGACTAGCTCCGGGGCTGTTTGCAGGTaGGTTGCGACATCAAACTGTTCAACTTCCTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: KTLSTSSGAVCR*VATSNCSTSFL Trigger: CAAAAAGGAAGTTGAACAGTTTGATGTCGCAACTCACCTGCAAACAGCCCCGGAGCTAGTCGACAGAGTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373014.5 ENST00000488453.1 |
||
| CDS CCA 72 bp | TGGCCATTTTATCAATGGCAGGAAATTATCCCCTGTTaGACACTCAGGCAATTCAGCTGCAGTGCAAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: WPFYQWQEIIPC*TLRQFSCSARR Trigger: CCTCCTTGCACTGCAGCTGAATTGCCTGAGTGTCCAACAGGGGATAATTTCCTGCCATTGATAAAATGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486563.1 |
||
| CDS GCA 72 bp | TTGGCAGCGCCTCTACCAGAAAGACTGAACTCACTCTaGACGAAGTTTGTAATCTTTCTTTTTCTCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LAAPLPERLNSL*TKFVIFLFLQQ Trigger: CTGCTGGAGAAAAAGAAAGATTACAAACTTCGTGCAGAGTGAGTTCAGTCTTTCTGGTAGAGGCGCTGCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486563.1 |
||
| CDS CCA 72 bp | CAGGGTCCACAGTCTAATCAACAGTTCCTATTCCAGTaGAACCTGAAATTAACTGTCCCCAGCCTATATATG | + |
|
Preference number: 6 (lower is better) Translates to: QGPQSNQQFLFQ*NLKLTVPSLYM Trigger: CATATATAGGCTGGGGACAGTTAATTTCAGGTTCCACTGGAATAGGAACTGTTGATTAGACTGTGGACCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488453.1 |
||
| CDS CAA 72 bp | TCGTTCAATCCGCTGTGTCAGGCAGTTATACTGCTTTaGCCTTTCTTTAGCTATTCGCTTAAGTCCAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SFNPLCQAVILL*PFFSYSLKSSL Trigger: CAGACTGGACTTAAGCGAATAGCTAAAGAAAGGCAAAAGCAGTATAACTGCCTGACACAGCGGATTGAACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373014.5 ENST00000488453.1 |
||
| CDS TCA 72 bp | TGTAATTCAGAAACTACACAGTACAGTATAGCGCAATaGCTAGAATCATGGACTCTGGAGCCAGACAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: CNSETTQYSIAQ*LESWTLEPDSM Trigger: CATGCTGTCTGGCTCCAGAGTCCATGATTCTAGTCATTGCGCTATACTGTACTGTGTAGTTTCTGAATTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488453.1 |
||
| CDS GCA 72 bp | TTCTCTCGTTCAATCCGCTGTGTCAGGCAGTTATACTaGTTTTGCCTTTCTTTAGCTATTCGCTTAAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FSRSIRCVRQLY*FCLSLAIRLSP Trigger: TGGACTTAAGCGAATAGCTAAAGAAAGGCAAAAGCAGTATAACTGCCTGACACAGCGGATTGAACGAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373014.5 ENST00000488453.1 |
||
| CDS CAA 90 bp | TTTCTTCTCTCGTTCAATCCGCTGTGTCAGGCAGTTATACTGCTTTaGCCTTTCTTTAGCTATTCGCTTAAGTCCAGTCTGATTGGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: FLLSFNPLCQAVILL*PFFSYSLKSSLIGN Trigger: GTTACCAATCAGACTGGACTTAAGCGAATAGCTAAAGAAAGGCAAAAGCAGTATAACTGCCTGACACAGCGGATTGAACGAGAGAAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373014.5 ENST00000488453.1 |
||
| CDS TCA 72 bp | GTTTTCAGAGTTCATTATCACCCACGCTTGGTCTCATaGATCCATCTTTCACATCTCTTCATTCCACATCAC | + |
|
Preference number: 6 (lower is better) Translates to: VFRVHYHPRLVS*IHLSHLFIPHH Trigger: GTGATGTGGAATGAAGAGATGTGAAAGATGGATTCATGAGACCAAGCGTGGGTGATAATGAACTCTGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000486563.1 ENST00000488453.1 |
||
| CDS TCA 72 bp | AACTCCTTAGGATATGGTGCAAGCTTGGGCACCAAATaGCCATATGTAATTCAGAAACTACACAGTACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: NSLGYGASLGTK*PYVIQKLHSTV Trigger: TACTGTACTGTGTAGTTTCTGAATTACATATGGTCATTTGGTGCCCAAGCTTGCACCATATCCTAAGGAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488453.1 |
||
| CDS CCA 72 bp | TCAACGTTTTCGACGACTCTGAAATTTATAAATAGCTaGGGAGTTCACCGTTTCTTTCTTCACCTTCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: STFSTTLKFINS*GVHRFFLHLHF Trigger: AAAGTGAAGGTGAAGAAAGAAACGGTGAACTCCCCAGCTATTTATAAATTTCAGAGTCGTCGAAAACGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373014.5 ENST00000488453.1 |
||
| CDS CAA 72 bp | ATGAATACGGTAATAGTAACCCATCCCAGAAGGTTGTaGGGAGGGACAAATCAGTGTAAAAACGGTAAATAT | + |
|
Preference number: 6 (lower is better) Translates to: MNTVIVTHPRRL*GGTNQCKNGKY Trigger: ATATTTACCGTTTTTACACTGATTTGTCCCTCCCAACAACCTTCTGGGATGGGTTACTATTACCGTATTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000488453.1 |
||
| CDS CCA 72 bp | CACCAAACAAAGTACAAATTAAAACTCCTTAGGATATaGTGCAAGCTTGGGCACCAAATGACCATATGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: HQTKYKLKLLRI*CKLGHQMTICN Trigger: ATTACATATGGTCATTTGGTGCCCAAGCTTGCACCATATCCTAAGGAGTTTTAATTTGTACTTTGTTTGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488453.1 |
||
| CDS CAA 90 bp | TTCATTTGTAAAATGAATACGGTAATAGTAACCCATCCCAGAAGGTaGTTGGGAGGGACAAATCAGTGTAAAAACGGTAAATATCCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: FICKMNTVIVTHPRR*LGGTNQCKNGKYPR Trigger: TCTAGGATATTTACCGTTTTTACACTGATTTGTCCCTCCCAACAACCTTCTGGGATGGGTTACTATTACCGTATTCATTTTACAAATGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000488453.1 |
||