RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USPL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000132952

Ensembl transcript IDs: ENST00000255304.9, ENST00000465952.5, ENST00000614860.1

Found 308 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTGAGAGGAGTCACCCTCTCCAGGGCCTTTTCTCTGCTGAGAGCTaGACACTTGAGGGACGACCTGCCCGCCGACACAGGGGAGCTGCT +
Preference number: 1 (lower is better)
Translates to: AERSHPLQGLFSAES*TLEGRPARRHRGAA
Trigger: AGCAGCTCCCCTGTGTCGGCGGGCAGGTCGTCCCTCAAGTGTTCAGCTCTCAGCAGAGAAAAGGCCCTGGAGAGGGTGACTCCTCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR CCA 90 bp ATCATTCCGGCTGCAGCCTTGGAGCAGGCAAGATCTCCACCCTCCTaGGTGCGGGTGCAGACTCAGGCATCCCTGCACTTTTGGGGGCCT +
Preference number: 1 (lower is better)
Translates to: IIPAAALEQARSPPS*VRVQTQASLHFWGP
Trigger: AGGCCCCCAAAAGTGCAGGGATGCCTGAGTCTGCACCCGCACCCAGGAGGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR CCA 90 bp GAGGCCCGTAAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTaGGACGACCAGCAACAGGGAGGAGCTACCCTCTCTGCTAAGAGC +
Preference number: 1 (lower is better)
Translates to: EARKMPQAQPELSRG*DDQQQGGATLSAKS
Trigger: GCTCTTAGCAGAGAGGGTAGCTCCTCCCTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTTACGGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR CCA 90 bp TGGGGGCCTGCTTTTGCAGGCTCGGAAGTGCTTGCCTCTGCAGCTTaGCTTCTCCCTGCTATTGGCACCAGCTCTCAGATCAAAGCAGGG +
Preference number: 1 (lower is better)
Translates to: WGPAFAGSEVLASAA*LLPAIGTSSQIKAG
Trigger: CCCTGCTTTGATCTGAGAGCTGGTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCAAGCACTTCCGAGCCTGCAAAAGCAGGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR CCA 90 bp CTAAGAGCTTCAGAGACCTGTAGAGACGGCAGAACAACCTGCCTATaGATAGAAGCTATCCTCTCCAGGGCCCCGTCTGAGAGCAGCAGG +
Preference number: 1 (lower is better)
Translates to: LRASETCRDGRTTCL*IEAILSRAPSESSR
Trigger: CCTGCTGCTCTCAGACGGGGCCCTGGAGAGGATAGCTTCTATCCATAGGCAGGTTGTTCTGCCGTCTCTACAGGTCTCTGAAGCTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR TCA 90 bp ACCTGCCCGCCGACACAGGGGAGCTGCTCACTGTGGGTCTCCTTCTaGGCTGTTCTAACACTAAATAAAGCTCCTCTTCTTCTTCTTCAC +
Preference number: 1 (lower is better)
Translates to: TCPPTQGSCSLWVSF*AVLTLNKAPLLLLH
Trigger: GTGAAGAAGAAGAAGAGGAGCTTTATTTAGTGTTAGAACAGCTCAGAAGGAGACCCACAGTGAGCAGCTCCCCTGTGTCGGCGGGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR CAA 90 bp TGCGGGTGCAGACTCAGGCATCCCTGCACTTTTGGGGGCCTGCTTTaGCAGGCTCGGAAGTGCTTGCCTCTGCAGCTTGGCTTCTCCCTG +
Preference number: 2 (lower is better)
Translates to: CGCRLRHPCTFGGLL*QARKCLPLQLGFSL
Trigger: CAGGGAGAAGCCAAGCTGCAGAGGCAAGCACTTCCGAGCCTGCAAAAGCAGGCCCCCAAAAGTGCAGGGATGCCTGAGTCTGCACCCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR TCA 90 bp TGCCTCTGCAGCTTGGCTTCTCCCTGCTATTGGCACCAGCTCTCAGATCAAAGCCTCCAGGGCCCCGTCTaGGAGCAGCAGGACCTCTGG +
Preference number: 2 (lower is better)
Translates to: CLCSLASPCYWHQLSDQSLQGPV*EQQDLW
Trigger: CCAGAGGTCCTGCTGCTCTCAGACGGGGCCCTGGAG...GCTTTGATCTGAGAGCTGGTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR TCA 90 bp AGTCAGCCTGCTATCATTCCGGCTGCAGCCTTGGAGCAGGCAAGATCTCCACCCAGGCTCAGCCAGAACTaGGCAGAGGGTGGGACGACC +
Preference number: 2 (lower is better)
Translates to: SQPAIIPAAALEQARSPPRLSQN*AEGGTT
Trigger: GGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCT...GGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCAGGCTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR TCA 90 bp CTGAGGGCCAGGCTGCCAGTCCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCTTCTCTGCTGAGAGCTaGACACTTGAGGGACGACCT +
Preference number: 2 (lower is better)
Translates to: LRARLPVPPVGVGTGAFSFSAES*TLEGRP
Trigger: AGGTCGTCCCTCAAGTGTTCAGCTCTCAGCAGAGAA...GGAAAAGGCACCAGTTCCCACTCCTACAGGTGGGACTGGCAGCCTGGCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR CCA 90 bp AGTCAGCCTGCTATCATTCCGGCTGCAGCCTTGGAGCAGGCAAGATCTCCACCCCTTGCCTCTGCAGCTTaGCTTCTCCCTGCTATTGGC +
Preference number: 2 (lower is better)
Translates to: SQPAIIPAAALEQARSPPLASAA*LLPAIG
Trigger: GCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCAAG...GGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCAGGCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR TCA 90 bp AGTCAGCCTGCTATCATTCCGGCTGCAGCCTTGGAGCAGGCAAGATCTCCACCCTTCTCTGCTGAGAGCTaGACACTTGAGGGACGACCT +
Preference number: 2 (lower is better)
Translates to: SQPAIIPAAALEQARSPPFSAES*TLEGRP
Trigger: AGGTCGTCCCTCAAGTGTTCAGCTCTCAGCAGAGAA...GGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCAGGCTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR CCA 90 bp TGCCTCTGCAGCTTGGCTTCTCCCTGCTATTGGCACCAGCTCTCAGATCAAAGCGAACTGAGCAGAGGGTaGGACGACCAGCAACAGGGA +
Preference number: 2 (lower is better)
Translates to: CLCSLASPCYWHQLSDQSELSRG*DDQQQG
Trigger: TCCCTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTC...GCTTTGATCTGAGAGCTGGTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR CCA 90 bp CCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTGAACTGAGCAGAGGGTaGGACGACCAGCAACAGGGA +
Preference number: 2 (lower is better)
Translates to: PTCRSGNWCLFQASKYALELSRG*DDQQQG
Trigger: TCCCTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTC...AAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACAGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR CCA 90 bp CCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTGAGCAGCAGGACCTCTaGACAATCTGCCTGCGAACA +
Preference number: 2 (lower is better)
Translates to: PTCRSGNWCLFQASKYALEQQDL*TICLRT
Trigger: TGTTCGCAGGCAGATTGTCCAGAGGTCCTGCTGCTC...AAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACAGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR GCA 90 bp AGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTCCTCCCCCGTCTGGACAATCTGCCTaGGAACAGAAGCTACCTTCT +
Preference number: 2 (lower is better)
Translates to: RSGNWCLFQASKYALPPPSGQSA*EQKLPS
Trigger: AGAAGGTAGCTTCTGTTCGCAGGCAGATTGTCCAGA...CGGGGGAGGAAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR TCA 90 bp AGGCCACACAACCATAAGGAAAACTGTCACACATTCATATACCGTATACAACTTGGAGGGCCTGAAGGCTaGGGGCCAGGCTGCCAGTCC +
Preference number: 2 (lower is better)
Translates to: RPHNHKENCHTFIYRIQLGGPEG*GPGCQS
Trigger: GGACTGGCAGCCTGGCCCTCAGCCTTCAGGCCCTCC...AAGTTGTATACGGTATATGAATGTGTGACAGTTTTCCTTATGGTTGTGTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR GCA 90 bp CTGAGGGCCAGGCTGCCAGTCCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCGTAAGAAAGATTACATaGTTCATGGGCAGAACCAAA +
Preference number: 2 (lower is better)
Translates to: LRARLPVPPVGVGTGAFSVRKIT*FMGRTK
Trigger: TTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTAC...GGAAAAGGCACCAGTTCCCACTCCTACAGGTGGGACTGGCAGCCTGGCCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR CCA 90 bp CTGAGGGCCAGGCTGCCAGTCCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCAGATTACATGCTTCATaGGCAGAACCAAAGGTTAAA +
Preference number: 2 (lower is better)
Translates to: LRARLPVPPVGVGTGAFSRLHAS*AEPKVK
Trigger: TTTAACCTTTGGTTCTGCCCATGAAGCATGTAATCT...GGAAAAGGCACCAGTTCCCACTCCTACAGGTGGGACTGGCAGCCTGGCCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR CCA 90 bp AAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGATTTGTCTGCATATCTaGACACAGGACAAGAACTCG +
Preference number: 2 (lower is better)
Translates to: KMPQAQPELSRGWDDQQQICLHI*TQDKNS
Trigger: CGAGTTCTTGTCCTGTGTCCAGATATGCAGACAAAT...CTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR CCA 90 bp AGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTCCTCCCCCGAGAACAACCTGCCTATaGATAGAAGCTATCCTCTCC +
Preference number: 2 (lower is better)
Translates to: RSGNWCLFQASKYALPPPRTTCL*IEAILS
Trigger: GGAGAGGATAGCTTCTATCCATAGGCAGGTTGTTCT...CGGGGGAGGAAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR TCA 90 bp AGGCCACACAACCATAAGGAAAACTGTCACACATTCATATACCGTATACAACTTCTCCAGGGCCCCGTCTaGGAGCAGCAGGACCTCTGG +
Preference number: 2 (lower is better)
Translates to: RPHNHKENCHTFIYRIQLLQGPV*EQQDLW
Trigger: CCAGAGGTCCTGCTGCTCTCAGACGGGGCCCTGGAG...AAGTTGTATACGGTATATGAATGTGTGACAGTTTTCCTTATGGTTGTGTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR GCA 90 bp CCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTTCTGGACAATCTGCCTaGGAACAGAAGCTACCTTCT +
Preference number: 2 (lower is better)
Translates to: PTCRSGNWCLFQASKYALSGQSA*EQKLPS
Trigger: AGAAGGTAGCTTCTGTTCGCAGGCAGATTGTCCAGA...AAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR GCA 90 bp AGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTCCTCCCCCGGTAAGAAAGATTACATaGTTCATGGGCAGAACCAAA +
Preference number: 2 (lower is better)
Translates to: RSGNWCLFQASKYALPPPVRKIT*FMGRTK
Trigger: TTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTAC...CGGGGGAGGAAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR GCA 90 bp AAAGTTTACATTCCACAGCACTCTACCGGTGTAACAAACAGGCGTAGGCTCTTAAGGCTCGGAAGTGCTTaGCTCTGCAGCTTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: KVYIPQHSTGVTNRRRLLRLGSA*LCSLAS
Trigger: AGAAGCCAAGCTGCAGAGGCAAGCACTTCCGAGCCT...TAAGAGCCTACGCCTGTTTGTTACACCGGTAGAGTGCTGTGGAATGTAAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR CCA 90 bp ACGACCAGCAACAGGGAGGAGCTACCCTCTCTGCTAAGAGCTTCAGAGACCTGTAGATTACATGCTTCATaGGCAGAACCAAAGGTTAAA +
Preference number: 2 (lower is better)
Translates to: TTSNREELPSLLRASETCRLHAS*AEPKVK
Trigger: TTTAACCTTTGGTTCTGCCCATGAAGCATGTAATCT...ACAGGTCTCTGAAGCTCTTAGCAGAGAGGGTAGCTCCTCCCTGTTGCTGGTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR GCA 90 bp AGGCCACACAACCATAAGGAAAACTGTCACACATTCATATACCGTATACAACTTAGACTCAGGCATCCCTaGACTTTTGGGGGCCTGCTT +
Preference number: 2 (lower is better)
Translates to: RPHNHKENCHTFIYRIQLRLRHP*TFGGLL
Trigger: AAGCAGGCCCCCAAAAGTGCAGGGATGCCTGAGTCT...AAGTTGTATACGGTATATGAATGTGTGACAGTTTTCCTTATGGTTGTGTGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR CCA 90 bp AGGCCACACAACCATAAGGAAAACTGTCACACATTCATATACCGTATACAACTTTGTAGGAGTGGGAACTaGTGCCTTTTCCAGGCCAGT +
Preference number: 2 (lower is better)
Translates to: RPHNHKENCHTFIYRIQLCRSGN*CLFQAS
Trigger: ACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACA...AAGTTGTATACGGTATATGAATGTGTGACAGTTTTCCTTATGGTTGTGTGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR CCA 90 bp AAAGTTTACATTCCACAGCACTCTACCGGTGTAACAAACAGGCGTAGGCTCTTAATTTGTCTGCATATCTaGACACAGGACAAGAACTCG +
Preference number: 2 (lower is better)
Translates to: KVYIPQHSTGVTNRRRLLICLHI*TQDKNS
Trigger: CGAGTTCTTGTCCTGTGTCCAGATATGCAGACAAAT...TAAGAGCCTACGCCTGTTTGTTACACCGGTAGAGTGCTGTGGAATGTAAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR CAA 90 bp AGATTACATGCTTCATGGGCAGAACCAAAGGTTAAACCTTGCATTTaGTTCATGGTTATTACACAAGTAATTACACAAGTCCAGTGTATA +
Preference number: 2 (lower is better)
Translates to: RLHASWAEPKVKPCI*FMVITQVITQVQCI
Trigger: TATACACTGGACTTGTGTAATTACTTGTGTAATAACCATGAACAAAATGCAAGGTTTAACCTTTGGTTCTGCCCATGAAGCATGTAATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR CCA 72 bp GCTCCAGTCAGCCTGCTATCATTCCGGCTGCAGCCTTaGAGCAGGCAAGATCTCCACCCTCCTGGGTGCGGG +
Preference number: 3 (lower is better)
Translates to: APVSLLSFRLQP*SRQDLHPPGCG
Trigger: CCCGCACCCAGGAGGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCAGGCTGACTGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR TCA 72 bp AGTCACCCTCTCCAGGGCCTTTTCTCTGCTGAGAGCTaGACACTTGAGGGACGACCTGCCCGCCGACACAGG +
Preference number: 3 (lower is better)
Translates to: SHPLQGLFSAES*TLEGRPARRHR
Trigger: CCTGTGTCGGCGGGCAGGTCGTCCCTCAAGTGTTCAGCTCTCAGCAGAGAAAAGGCCCTGGAGAGGGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR GCA 72 bp GGGGCCTGCTTTTGCAGGCTCGGAAGTGCTTGCCTCTaGAGCTTGGCTTCTCCCTGCTATTGGCACCAGCTC +
Preference number: 3 (lower is better)
Translates to: GACFCRLGSACL*SLASPCYWHQL
Trigger: GAGCTGGTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCAAGCACTTCCGAGCCTGCAAAAGCAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR CCA 72 bp AAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTaGGACGACCAGCAACAGGGAGGAGCTACCCTCTCT +
Preference number: 3 (lower is better)
Translates to: KMPQAQPELSRG*DDQQQGGATLS
Trigger: AGAGAGGGTAGCTCCTCCCTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR GCA 72 bp CCGTCTGAGAGCAGCAGGACCTCTGGACAATCTGCCTaGGAACAGAAGCTACCTTCTCCAGGGCTGCTTCTC +
Preference number: 3 (lower is better)
Translates to: PSESSRTSGQSA*EQKLPSPGLLL
Trigger: GAGAAGCAGCCCTGGAGAAGGTAGCTTCTGTTCGCAGGCAGATTGTCCAGAGGTCCTGCTGCTCTCAGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR CCA 72 bp GCTTTTGCAGGCTCGGAAGTGCTTGCCTCTGCAGCTTaGCTTCTCCCTGCTATTGGCACCAGCTCTCAGATC +
Preference number: 3 (lower is better)
Translates to: AFAGSEVLASAA*LLPAIGTSSQI
Trigger: GATCTGAGAGCTGGTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCAAGCACTTCCGAGCCTGCAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR TCA 72 bp CCGACACAGGGGAGCTGCTCACTGTGGGTCTCCTTCTaGGCTGTTCTAACACTAAATAAAGCTCCTCTTCTT +
Preference number: 3 (lower is better)
Translates to: PTQGSCSLWVSF*AVLTLNKAPLL
Trigger: AAGAAGAGGAGCTTTATTTAGTGTTAGAACAGCTCAGAAGGAGACCCACAGTGAGCAGCTCCCCTGTGTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR CAA 90 bp CCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTTTCTTCACCCTTCATTaGTCTGCATATCTGGACACA +
Preference number: 3 (lower is better)
Translates to: PTCRSGNWCLFQASKYALFFTLH*SAYLDT
Trigger: TGTGTCCAGATATGCAGACAAATGAAGGGTGAAGAA...AAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACAGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR CCA 72 bp TCTTCTTCTTCTTCACCCTTCATTTGTCTGCATATCTaGACACAGGACAAGAACTCGGGCACCGTGGGCAAA +
Preference number: 3 (lower is better)
Translates to: SSSSSPFICLHI*TQDKNSGTVGK
Trigger: TTTGCCCACGGTGCCCGAGTTCTTGTCCTGTGTCCAGATATGCAGACAAATGAAGGGTGAAGAAGAAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR-3UTR CAA 90 bp AAAGTTTACATTCCACAGCACTCTACCGGTGTAACAAACAGGCGTAGGCTCTTATTCTTCACCCTTCATTaGTCTGCATATCTGGACACA +
Preference number: 3 (lower is better)
Translates to: KVYIPQHSTGVTNRRRLLFFTLH*SAYLDT
Trigger: TGTGTCCAGATATGCAGACAAATGAAGGGTGAAGAA...TAAGAGCCTACGCCTGTTTGTTACACCGGTAGAGTGCTGTGGAATGTAAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp CTGAGGGCCAGGCTGCCAGTCCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCCTCCAGGGCCCCGTCTaGGAGCAGCAGGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: LRARLPVPPVGVGTGAFSLQGPV*EQQDLW
Trigger: CCAGAGGTCCTGCTGCTCTCAGACGGGGCCCTGGAG...GGAAAAGGCACCAGTTCCCACTCCTACAGGTGGGACTGGCAGCCTGGCCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp CTGAGGGCCAGGCTGCCAGTCCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCCCTCCTGGGTGCGGGTaGAGACTCAGGCATCCCTGC +
Preference number: 4 (lower is better)
Translates to: LRARLPVPPVGVGTGAFSPPGCG*RLRHPC
Trigger: GCAGGGATGCCTGAGTCTGCACCCGCACCCAGGAGG...GGAAAAGGCACCAGTTCCCACTCCTACAGGTGGGACTGGCAGCCTGGCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp AGTCAGCCTGCTATCATTCCGGCTGCAGCCTTGGAGCAGGCAAGATCTCCACCCCTCCAGGGCCCCGTCTaGGAGCAGCAGGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: SQPAIIPAAALEQARSPPLQGPV*EQQDLW
Trigger: CCAGAGGTCCTGCTGCTCTCAGACGGGGCCCTGGAG...GGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCAGGCTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp AGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTCCTCCCCCGGGAGGGCCTGAAGGCTaGGGGCCAGGCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: RSGNWCLFQASKYALPPPGGPEG*GPGCQS
Trigger: GGACTGGCAGCCTGGCCCTCAGCCTTCAGGCCCTCC...CGGGGGAGGAAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp CCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGGGAGGATTGCAGGCTCGGAAGTaGTTGCCTCTGCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: PQAQPELSRGWDDQQQGGLQARK*LPLQLG
Trigger: GCCAAGCTGCAGAGGCAAGCACTTCCGAGCCTGCAA...TCCTCCCTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp CTGAGGGCCAGGCTGCCAGTCCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCGGGCACTCCCCTTCTTaGTACCGGGTCGATCGGAAC +
Preference number: 4 (lower is better)
Translates to: LRARLPVPPVGVGTGAFSGHSPS*YRVDRN
Trigger: GTTCCGATCGACCCGGTACCAAGAAGGGGAGTGCCC...GGAAAAGGCACCAGTTCCCACTCCTACAGGTGGGACTGGCAGCCTGGCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp TGCAGGCTCGGAAGTGCTTGCCTCTGCAGCTTGGCTTCTCCCTGCTATTGGCACAGGCTCAGCCAGAACTaGGCAGAGGGTGGGACGACC +
Preference number: 4 (lower is better)
Translates to: CRLGSACLCSLASPCYWHRLSQN*AEGGTT
Trigger: GGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCT...GTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCAAGCACTTCCGAGCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp CCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTGGAGGGCCTGAAGGCTaGGGGCCAGGCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PTCRSGNWCLFQASKYALGGPEG*GPGCQS
Trigger: GGACTGGCAGCCTGGCCCTCAGCCTTCAGGCCCTCC...AAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACAGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp GCCCGTAAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGAGACGATGGAGGGCCTaGTGGTGGCTTACTGATGGG +
Preference number: 4 (lower is better)
Translates to: ARKMPQAQPELSRGWDDQRRWRA*WWLTDG
Trigger: CCCATCAGTAAGCCACCAGCAGGCCCTCCATCGTCT...CTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTTACGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp CTGAGGGCCAGGCTGCCAGTCCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCGGAAGTGCTTGCCTCTaGAGCTTGGCTTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LRARLPVPPVGVGTGAFSGSACL*SLASPC
Trigger: GCAGGGAGAAGCCAAGCTGCAGAGGCAAGCACTTCC...GGAAAAGGCACCAGTTCCCACTCCTACAGGTGGGACTGGCAGCCTGGCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp CTGAGGGCCAGGCTGCCAGTCCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCGTGCTCCAGTCAGCCTaGTATCATTCCGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LRARLPVPPVGVGTGAFSVLQSA*YHSGCS
Trigger: GCTGCAGCCGGAATGATAGCAGGCTGACTGGAGCAC...GGAAAAGGCACCAGTTCCCACTCCTACAGGTGGGACTGGCAGCCTGGCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp ACGACCAGCAACAGGGAGGAGCTACCCTCTCTGCTAAGAGCTTCAGAGACCTGTCCTCCTGGGTGCGGGTaGAGACTCAGGCATCCCTGC +
Preference number: 4 (lower is better)
Translates to: TTSNREELPSLLRASETCPPGCG*RLRHPC
Trigger: GCAGGGATGCCTGAGTCTGCACCCGCACCCAGGAGG...ACAGGTCTCTGAAGCTCTTAGCAGAGAGGGTAGCTCCTCCCTGTTGCTGGTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp GCCCGTAAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGAGCAGCATGAGCATGTaGGTGGGCAGCTGTGCCATT +
Preference number: 4 (lower is better)
Translates to: ARKMPQAQPELSRGWDDQSSMSM*VGSCAI
Trigger: AATGGCACAGCTGCCCACCCACATGCTCATGCTGCT...CTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTTACGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR CAA 72 bp AGACTCAGGCATCCCTGCACTTTTGGGGGCCTGCTTTaGCAGGCTCGGAAGTGCTTGCCTCTGCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: RLRHPCTFGGLL*QARKCLPLQLG
Trigger: GCCAAGCTGCAGAGGCAAGCACTTCCGAGCCTGCAAAAGCAGGCCCCCAAAAGTGCAGGGATGCCTGAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp CCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTACGTTCCCCTCGGACTaGTCCTCCCCCACTCGCGTC +
Preference number: 4 (lower is better)
Translates to: PTCRSGNWCLFQASKYALTFPSD*SSPTRV
Trigger: GACGCGAGTGGGGGAGGAGCAGTCCGAGGGGAACGT...AAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACAGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS-3UTR CCA 90 bp GCCCGTAAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGTGTAGGAGTGGGAACTaGTGCCTTTTCCAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: ARKMPQAQPELSRGWDDQCRSGN*CLFQAS
Trigger: ACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACA...CTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTTACGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp AAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGCTGCTGGTGGCTTACTaGTGGGAGGAGGCTTACTTG +
Preference number: 4 (lower is better)
Translates to: KMPQAQPELSRGWDDQQQLLVAY*WEEAYL
Trigger: CAAGTAAGCCTCCTCCCATCAGTAAGCCACCAGCAG...CTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp CCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGGGAGGACATAAGAACTGTGGTTaGGTTGAGCTCCACATGAGG +
Preference number: 4 (lower is better)
Translates to: PQAQPELSRGWDDQQQGGHKNCG*VELHMR
Trigger: CCTCATGTGGAGCTCAACTCAACCACAGTTCTTATG...TCCTCCCTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp CTGAGGGCCAGGCTGCCAGTCCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCGATCTCCACCCTAGTTaGAACGTTCAACCCACGTTC +
Preference number: 4 (lower is better)
Translates to: LRARLPVPPVGVGTGAFSDLHPS*NVQPTF
Trigger: GAACGTGGGTTGAACGTTGCAACTAGGGTGGAGATC...GGAAAAGGCACCAGTTCCCACTCCTACAGGTGGGACTGGCAGCCTGGCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp ACGACCAGCAACAGGGAGGAGCTACCCTCTCTGCTAAGAGCTTCAGAGACCTGTCCGAGGCCCGTAAAATaGCCCAGGCTCAGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: TTSNREELPSLLRASETCPRPVK*PRLSQN
Trigger: GTTCTGGCTGAGCCTGGGGCATTTTACGGGCCTCGG...ACAGGTCTCTGAAGCTCTTAGCAGAGAGGGTAGCTCCTCCCTGTTGCTGGTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp AGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTCCTCCCCCGGGAAGTGCTTGCCTCTaGAGCTTGGCTTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: RSGNWCLFQASKYALPPPGSACL*SLASPC
Trigger: GCAGGGAGAAGCCAAGCTGCAGAGGCAAGCACTTCC...CGGGGGAGGAAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp AGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTCCTCCCCCGTTGCAGGCTCGGAAGTaGTTGCCTCTGCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: RSGNWCLFQASKYALPPPLQARK*LPLQLG
Trigger: GCCAAGCTGCAGAGGCAAGCACTTCCGAGCCTGCAA...CGGGGGAGGAAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp AAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGTGCTATCATTCCGGCTaGAGCCTTGGAGCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: KMPQAQPELSRGWDDQQQCYHSG*SLGAGK
Trigger: CTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCA...CTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp AGTCAGCCTGCTATCATTCCGGCTGCAGCCTTGGAGCAGGCAAGATCTCCACCCTGCTATCATTCCGGCTaGAGCCTTGGAGCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: SQPAIIPAAALEQARSPPCYHSG*SLGAGK
Trigger: CTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCA...GGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCAGGCTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp ACGACCAGCAACAGGGAGGAGCTACCCTCTCTGCTAAGAGCTTCAGAGACCTGTTGGAGGGCCTGCTGGTaGCTTACTGATGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TTSNREELPSLLRASETCWRACW*LTDGRR
Trigger: CCTCCTCCCATCAGTAAGCCACCAGCAGGCCCTCCA...ACAGGTCTCTGAAGCTCTTAGCAGAGAGGGTAGCTCCTCCCTGTTGCTGGTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp AGTCAGCCTGCTATCATTCCGGCTGCAGCCTTGGAGCAGGCAAGATCTCCACCCTGTGCCATTAGACGATaGAGGGCCTGCTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SQPAIIPAAALEQARSPPCAIRR*RACWWL
Trigger: AAGCCACCAGCAGGCCCTCCATCGTCTAATGGCACA...GGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCAGGCTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp TGCAGGCTCGGAAGTGCTTGCCTCTGCAGCTTGGCTTCTCCCTGCTATTGGCACGAGCAGCAGGACCTCTaGACAATCTGCCTGCGAACA +
Preference number: 4 (lower is better)
Translates to: CRLGSACLCSLASPCYWHEQQDL*TICLRT
Trigger: TGTTCGCAGGCAGATTGTCCAGAGGTCCTGCTGCTC...GTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCAAGCACTTCCGAGCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp CCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGGGAGGAAGTACGAGGGGCAACTaGTATATCTTTAGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: PQAQPELSRGWDDQQQGGSTRGN*YIFRVS
Trigger: ACTCACCCTAAAGATATATCAGTTGCCCCTCGTACT...TCCTCCCTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp AGTCAGCCTGCTATCATTCCGGCTGCAGCCTTGGAGCAGGCAAGATCTCCACCCTACAGCTGTGTCCTGTaGAAGAGTACGAGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: SQPAIIPAAALEQARSPPYSCVL*KSTRGN
Trigger: GTTGCCCCTCGTACTCTTTCACAGGACACAGCTGTA...GGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCAGGCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp TGCAGGCTCGGAAGTGCTTGCCTCTGCAGCTTGGCTTCTCCCTGCTATTGGCACTTCTCTGCTGAGAGCTaGACACTTGAGGGACGACCT +
Preference number: 4 (lower is better)
Translates to: CRLGSACLCSLASPCYWHFSAES*TLEGRP
Trigger: AGGTCGTCCCTCAAGTGTTCAGCTCTCAGCAGAGAA...GTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCAAGCACTTCCGAGCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp CTGAGGGCCAGGCTGCCAGTCCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCTTTGAGGGGAAGGTCTaGCAGTTCCAGAGACATCAA +
Preference number: 4 (lower is better)
Translates to: LRARLPVPPVGVGTGAFSFEGKV*QFQRHQ
Trigger: TTGATGTCTCTGGAACTGGCAGACCTTCCCCTCAAA...GGAAAAGGCACCAGTTCCCACTCCTACAGGTGGGACTGGCAGCCTGGCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS-3UTR GCA 90 bp ACGACCAGCAACAGGGAGGAGCTACCCTCTCTGCTAAGAGCTTCAGAGACCTGTAGACGATGGAGGGCCTaGTGGTGGCTTACTGATGGG +
Preference number: 4 (lower is better)
Translates to: TTSNREELPSLLRASETCRRWRA*WWLTDG
Trigger: CCCATCAGTAAGCCACCAGCAGGCCCTCCATCGTCT...ACAGGTCTCTGAAGCTCTTAGCAGAGAGGGTAGCTCCTCCCTGTTGCTGGTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp GCCGACACAGGGGAGCTGCTCACTGTGGGTCTCCTTCTGAGCTGTTCTAACACTAGACTCAGGCATCCCTaGACTTTTGGGGGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: ADTGELLTVGLLLSCSNTRLRHP*TFGGLL
Trigger: AAGCAGGCCCCCAAAAGTGCAGGGATGCCTGAGTCT...AGTGTTAGAACAGCTCAGAAGGAGACCCACAGTGAGCAGCTCCCCTGTGTCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp CCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGGGAGGAAGTAACAAGGTTTCTTaGCCTCCTCTGTATGGAGAG +
Preference number: 4 (lower is better)
Translates to: PQAQPELSRGWDDQQQGGSNKVS*PPLYGE
Trigger: CTCTCCATACAGAGGAGGGCAAGAAACCTTGTTACT...TCCTCCCTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp GCCGACACAGGGGAGCTGCTCACTGTGGGTCTCCTTCTGAGCTGTTCTAACACTAGCAGCATGAGCATGTaGGTGGGCAGCTGTGCCATT +
Preference number: 4 (lower is better)
Translates to: ADTGELLTVGLLLSCSNTSSMSM*VGSCAI
Trigger: AATGGCACAGCTGCCCACCCACATGCTCATGCTGCT...AGTGTTAGAACAGCTCAGAAGGAGACCCACAGTGAGCAGCTCCCCTGTGTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp CCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGGGAGGAAGAACAACCTGCCTATaGATAGAAGCTATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PQAQPELSRGWDDQQQGGRTTCL*IEAILS
Trigger: GGAGAGGATAGCTTCTATCCATAGGCAGGTTGTTCT...TCCTCCCTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp TGCCTCTGCAGCTTGGCTTCTCCCTGCTATTGGCACCAGCTCTCAGATCAAAGCTTCCGGCTGCAGCCTTaGAGCAGGCAAGATCTCCAC +
Preference number: 4 (lower is better)
Translates to: CLCSLASPCYWHQLSDQSFRLQP*SRQDLH
Trigger: GTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAA...GCTTTGATCTGAGAGCTGGTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp CCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGGGAGGATTCATATGCCTGTTTTaGTATTGGTGTCCACACTGC +
Preference number: 4 (lower is better)
Translates to: PQAQPELSRGWDDQQQGGFICLF*YWCPHC
Trigger: GCAGTGTGGACACCAATATCAAAACAGGCATATGAA...TCCTCCCTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp GCCGACACAGGGGAGCTGCTCACTGTGGGTCTCCTTCTGAGCTGTTCTAACACTTACAGCTGTGTCCTGTaGAAGAGTACGAGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: ADTGELLTVGLLLSCSNTYSCVL*KSTRGN
Trigger: GTTGCCCCTCGTACTCTTTCACAGGACACAGCTGTA...AGTGTTAGAACAGCTCAGAAGGAGACCCACAGTGAGCAGCTCCCCTGTGTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp AGTCAGCCTGCTATCATTCCGGCTGCAGCCTTGGAGCAGGCAAGATCTCCACCCGAACTGTGGTTGAGTTaGGCTCCACATGAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: SQPAIIPAAALEQARSPPELWLS*APHEVL
Trigger: AAGCACCTCATGTGGAGCTCAACTCAACCACAGTTC...GGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCAGGCTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp GCCCGTAAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGGTCAGAGAGTCTGGCTaGACTTCACATGGATTTTTC +
Preference number: 4 (lower is better)
Translates to: ARKMPQAQPELSRGWDDQVRESG*TSHGFF
Trigger: GAAAAATCCATGTGAAGTTCAGCCAGACTCTCTGAC...CTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTTACGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp GCCGACACAGGGGAGCTGCTCACTGTGGGTCTCCTTCTGAGCTGTTCTAACACTTTCTCTGCTGAGAGCTaGACACTTGAGGGACGACCT +
Preference number: 4 (lower is better)
Translates to: ADTGELLTVGLLLSCSNTFSAES*TLEGRP
Trigger: AGGTCGTCCCTCAAGTGTTCAGCTCTCAGCAGAGAA...AGTGTTAGAACAGCTCAGAAGGAGACCCACAGTGAGCAGCTCCCCTGTGTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp AGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTCCTCCCCCGCACCAGGAACAGTGGTaGATGCAGACTCACTGGCAA +
Preference number: 4 (lower is better)
Translates to: RSGNWCLFQASKYALPPPHQEQW*MQTHWQ
Trigger: TTGCCAGTGAGTCTGCATGCACCACTGTTCCTGGTG...CGGGGGAGGAAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp GCCGACACAGGGGAGCTGCTCACTGTGGGTCTCCTTCTGAGCTGTTCTAACACTAGGAGTGGGAACTGGTaGCTTTTCCAGGCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: ADTGELLTVGLLLSCSNTRSGNW*LFQASK
Trigger: CTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCT...AGTGTTAGAACAGCTCAGAAGGAGACCCACAGTGAGCAGCTCCCCTGTGTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp TGCCTCTGCAGCTTGGCTTCTCCCTGCTATTGGCACCAGCTCTCAGATCAAAGCAGGCTCGGAAGTGCTTaGCTCTGCAGCTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CLCSLASPCYWHQLSDQSRLGSA*LCSLAS
Trigger: AGAAGCCAAGCTGCAGAGGCAAGCACTTCCGAGCCT...GCTTTGATCTGAGAGCTGGTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp GCCCGTAAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGTCTTGGATACGTGGCTaGCCTTCTGGTTTATACCTT +
Preference number: 4 (lower is better)
Translates to: ARKMPQAQPELSRGWDDQSWIRG*PSGLYL
Trigger: AAGGTATAAACCAGAAGGCCAGCCACGTATCCAAGA...CTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTTACGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp CTGAGGGCCAGGCTGCCAGTCCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCGCTTTCTTGGATACGTaGCTGGCCTTCTGGTTTATA +
Preference number: 4 (lower is better)
Translates to: LRARLPVPPVGVGTGAFSAFLDT*LAFWFI
Trigger: TATAAACCAGAAGGCCAGCCACGTATCCAAGAAAGC...GGAAAAGGCACCAGTTCCCACTCCTACAGGTGGGACTGGCAGCCTGGCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp CTGAGGGCCAGGCTGCCAGTCCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCACTTGGTACTGGTGGTaGGATATGACTATCTCCCAT +
Preference number: 4 (lower is better)
Translates to: LRARLPVPPVGVGTGAFSTWYWW*DMTISH
Trigger: ATGGGAGATAGTCATATCCCACCACCAGTACCAAGT...GGAAAAGGCACCAGTTCCCACTCCTACAGGTGGGACTGGCAGCCTGGCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp GCCGACACAGGGGAGCTGCTCACTGTGGGTCTCCTTCTGAGCTGTTCTAACACTTGTAGGAGTGGGAACTaGTGCCTTTTCCAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: ADTGELLTVGLLLSCSNTCRSGN*CLFQAS
Trigger: ACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACA...AGTGTTAGAACAGCTCAGAAGGAGACCCACAGTGAGCAGCTCCCCTGTGTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp ACGACCAGCAACAGGGAGGAGCTACCCTCTCTGCTAAGAGCTTCAGAGACCTGTCTTGCCTCTGCAGCTTaGCTTCTCCCTGCTATTGGC +
Preference number: 4 (lower is better)
Translates to: TTSNREELPSLLRASETCLASAA*LLPAIG
Trigger: GCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCAAG...ACAGGTCTCTGAAGCTCTTAGCAGAGAGGGTAGCTCCTCCCTGTTGCTGGTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp CCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTTTCCGGCTGCAGCCTTaGAGCAGGCAAGATCTCCAC +
Preference number: 4 (lower is better)
Translates to: PTCRSGNWCLFQASKYALFRLQP*SRQDLH
Trigger: GTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAA...AAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACAGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR CAA 72 bp TGCTTTTGCAGGCTCGGAAGTGCTTGCCTCTGCAGCTaGGCTTCTCCCTGCTATTGGCACCAGCTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: CFCRLGSACLCS*ASPCYWHQLSD
Trigger: ATCTGAGAGCTGGTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCAAGCACTTCCGAGCCTGCAAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp AGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTCCTCCCCCGGAGTTGAGCTCCACATaGGGTGCTTCCAGACTTTTC +
Preference number: 4 (lower is better)
Translates to: RSGNWCLFQASKYALPPPELSST*GASRLF
Trigger: GAAAAGTCTGGAAGCACCTCATGTGGAGCTCAACTC...CGGGGGAGGAAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp TGCAGGCTCGGAAGTGCTTGCCTCTGCAGCTTGGCTTCTCCCTGCTATTGGCACACTGGTGGTGGGATATaGCTATCTCCCATTCCCAAA +
Preference number: 4 (lower is better)
Translates to: CRLGSACLCSLASPCYWHTGGGI*LSPIPK
Trigger: TTTGGGAATGGGAGATAGTCATATCCCACCACCAGT...GTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCAAGCACTTCCGAGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp CCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTTTCTCTGCTGAGAGCTaGGAGGAGTCACCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PTCRSGNWCLFQASKYALFSAES*EESPSP
Trigger: TGGAGAGGGTGACTCCTCTCAGCTCTCAGCAGAGAA...AAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACAGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp AGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTCCTCCCCCGGATCTCCACCCTAGTTaGAACGTTCAACCCACGTTC +
Preference number: 4 (lower is better)
Translates to: RSGNWCLFQASKYALPPPDLHPS*NVQPTF
Trigger: GAACGTGGGTTGAACGTTGCAACTAGGGTGGAGATC...CGGGGGAGGAAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp AAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGGGGAGGAGGCTTACTTaGACTCTTACGAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: KMPQAQPELSRGWDDQQQGRRLT*TLTSFL
Trigger: AAGAAAGCTCGTAAGAGTGCAAGTAAGCCTCCTCCC...CTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp AGTCAGCCTGCTATCATTCCGGCTGCAGCCTTGGAGCAGGCAAGATCTCCACCCAGGAACAGTGGTGCATaGAGACTCACTGGCAATATC +
Preference number: 4 (lower is better)
Translates to: SQPAIIPAAALEQARSPPRNSGA*RLTGNI
Trigger: GATATTGCCAGTGAGTCTGCATGCACCACTGTTCCT...GGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCAGGCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp GCCCGTAAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGTTGCCCTCCTCTGTATaGAGAGATAAAGGAGATAAG +
Preference number: 4 (lower is better)
Translates to: ARKMPQAQPELSRGWDDQLPSSV*RDKGDK
Trigger: CTTATCTCCTTTATCTCTCCATACAGAGGAGGGCAA...CTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTTACGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp GCCGACACAGGGGAGCTGCTCACTGTGGGTCTCCTTCTGAGCTGTTCTAACACTGCAGCATTAAGTGGGTaGCACTCAGGGATGACATTT +
Preference number: 4 (lower is better)
Translates to: ADTGELLTVGLLLSCSNTAALSG*HSGMTF
Trigger: AAATGTCATCCCTGAGTGGCACCCACTTAATGCTGC...AGTGTTAGAACAGCTCAGAAGGAGACCCACAGTGAGCAGCTCCCCTGTGTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp CCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTCACCAGGAACAGTGGTaGATGCAGACTCACTGGCAA +
Preference number: 4 (lower is better)
Translates to: PTCRSGNWCLFQASKYALHQEQW*MQTHWQ
Trigger: TTGCCAGTGAGTCTGCATGCACCACTGTTCCTGGTG...AAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACAGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp GGGCAAAGCGCCACGAGCAACAGGTTTCCAGGGGAAGAAAACCACCACAAAGATAGGAGTGGGAACTGGTaGCTTTTCCAGGCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: GQSATSNRFPGEENHHKDRSGNW*LFQASK
Trigger: CTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCT...ATCTTTGTGGTGGTTTTCTTCCCCTGGAAACCTGTTGCTCGTGGCGCTTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp GCCCGTAAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGTGGACACATAAAGCCTaGGGAAATGATGTACATTTG +
Preference number: 4 (lower is better)
Translates to: ARKMPQAQPELSRGWDDQWTHKA*GNDVHL
Trigger: CAAATGTACATCATTTCCCCAGGCTTTATGTGTCCA...CTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTTACGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS-3UTR CCA 90 bp AAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGTCTTGGATACGTGGCTaGCCTTCTGGTTTATACCTT +
Preference number: 4 (lower is better)
Translates to: KMPQAQPELSRGWDDQQQSWIRG*PSGLYL
Trigger: AAGGTATAAACCAGAAGGCCAGCCACGTATCCAAGA...CTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp ACGACCAGCAACAGGGAGGAGCTACCCTCTCTGCTAAGAGCTTCAGAGACCTGTAAACACCAGGAACAGTaGTGCATGCAGACTCACTGG +
Preference number: 4 (lower is better)
Translates to: TTSNREELPSLLRASETCKHQEQ*CMQTHW
Trigger: CCAGTGAGTCTGCATGCACCACTGTTCCTGGTGTTT...ACAGGTCTCTGAAGCTCTTAGCAGAGAGGGTAGCTCCTCCCTGTTGCTGGTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp GCCCGTAAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGGTTTCTATTATGAGCTaGAACACAGAGTGGCATAAA +
Preference number: 4 (lower is better)
Translates to: ARKMPQAQPELSRGWDDQVSIMS*NTEWHK
Trigger: TTTATGCCACTCTGTGTTTCAGCTCATAATAGAAAC...CTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTTACGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp GGGCAAAGCGCCACGAGCAACAGGTTTCCAGGGGAAGAAAACCACCACAAAGATGAACTGTGGTTGAGTTaGGCTCCACATGAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: GQSATSNRFPGEENHHKDELWLS*APHEVL
Trigger: AAGCACCTCATGTGGAGCTCAACTCAACCACAGTTC...ATCTTTGTGGTGGTTTTCTTCCCCTGGAAACCTGTTGCTCGTGGCGCTTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp GCCCGTAAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGAGATATTCATCGAAATaGGGTAGGTCTAATGTGTCA +
Preference number: 4 (lower is better)
Translates to: ARKMPQAQPELSRGWDDQRYSSK*GRSNVS
Trigger: TGACACATTAGACCTACCTCATTTCGATGAATATCT...CTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTTACGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp AGTCAGCCTGCTATCATTCCGGCTGCAGCCTTGGAGCAGGCAAGATCTCCACCCTATTGGTGTCCACACTaGGAACATTCAAAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: SQPAIIPAAALEQARSPPYWCPH*EHSKSQ
Trigger: TTGGGACTTTGAATGTTCGCAGTGTGGACACCAATA...GGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCAGGCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp ACGACCAGCAACAGGGAGGAGCTACCCTCTCTGCTAAGAGCTTCAGAGACCTGTCGAACTGTTCTGCTTTaGGGGGAAGACATAAGAGCA +
Preference number: 4 (lower is better)
Translates to: TTSNREELPSLLRASETCRTVLL*GEDIRA
Trigger: TGCTCTTATGTCTTCCCCGCAAAGCAGAACAGTTCG...ACAGGTCTCTGAAGCTCTTAGCAGAGAGGGTAGCTCCTCCCTGTTGCTGGTCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp TGCCTCTGCAGCTTGGCTTCTCCCTGCTATTGGCACCAGCTCTCAGATCAAAGCAGGAACAGTGGTGCATaGAGACTCACTGGCAATATC +
Preference number: 4 (lower is better)
Translates to: CLCSLASPCYWHQLSDQSRNSGA*RLTGNI
Trigger: GATATTGCCAGTGAGTCTGCATGCACCACTGTTCCT...GCTTTGATCTGAGAGCTGGTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp GCCGACACAGGGGAGCTGCTCACTGTGGGTCTCCTTCTGAGCTGTTCTAACACTTTACATGGACCAAAATaGGCAGCATTAAGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: ADTGELLTVGLLLSCSNTLHGPK*AALSGC
Trigger: GCACCCACTTAATGCTGCCCATTTTGGTCCATGTAA...AGTGTTAGAACAGCTCAGAAGGAGACCCACAGTGAGCAGCTCCCCTGTGTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp AGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTCCTCCCCCGTTCACTTGGTACTGGTaGTGGGATATGACTATCTCC +
Preference number: 4 (lower is better)
Translates to: RSGNWCLFQASKYALPPPFTWYW*WDMTIS
Trigger: GGAGATAGTCATATCCCACCACCAGTACCAAGTGAA...CGGGGGAGGAAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp AGTCAGCCTGCTATCATTCCGGCTGCAGCCTTGGAGCAGGCAAGATCTCCACCCGAATTCACTTGGTACTaGTGGTGGGATATGACTATC +
Preference number: 4 (lower is better)
Translates to: SQPAIIPAAALEQARSPPEFTWY*WWDMTI
Trigger: GATAGTCATATCCCACCACCAGTACCAAGTGAATTC...GGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCAGGCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp CCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGGGAGGACACATGGATTTTTCTTaGTGGGGCTACAATAATTAT +
Preference number: 4 (lower is better)
Translates to: PQAQPELSRGWDDQQQGGHMDFS*WGYNNY
Trigger: ATAATTATTGTAGCCCCACCAAGAAAAATCCATGTG...TCCTCCCTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp AGTCAGCCTGCTATCATTCCGGCTGCAGCCTTGGAGCAGGCAAGATCTCCACCCATTTGTCTGCATATCTaGACACAGGACAAGAACTCG +
Preference number: 4 (lower is better)
Translates to: SQPAIIPAAALEQARSPPICLHI*TQDKNS
Trigger: CGAGTTCTTGTCCTGTGTCCAGATATGCAGACAAAT...GGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCAGGCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp AAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGTTGCCCTCCTCTGTATaGAGAGATAAAGGAGATAAG +
Preference number: 4 (lower is better)
Translates to: KMPQAQPELSRGWDDQQQLPSSV*RDKGDK
Trigger: CTTATCTCCTTTATCTCTCCATACAGAGGAGGGCAA...CTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp CCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTCATAAGAACTGTGGTTaGGTTGAGCTCCACATGAGG +
Preference number: 4 (lower is better)
Translates to: PTCRSGNWCLFQASKYALHKNCG*VELHMR
Trigger: CCTCATGTGGAGCTCAACTCAACCACAGTTCTTATG...AAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp CCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTACTGGTGGTGGGATATaGCTATCTCCCATTCCCAAA +
Preference number: 4 (lower is better)
Translates to: PTCRSGNWCLFQASKYALTGGGI*LSPIPK
Trigger: TTTGGGAATGGGAGATAGTCATATCCCACCACCAGT...AAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp AGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTCCTCCCCCGTCTGGGAAACATCATTaGATTCACTTGGTACTGGTG +
Preference number: 4 (lower is better)
Translates to: RSGNWCLFQASKYALPPPSGKHH*IHLVLV
Trigger: CACCAGTACCAAGTGAATTCAATGATGTTTCCCAGA...CGGGGGAGGAAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp CCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTGGGAGGAGGCTTACTTaGACTCTTACGAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PTCRSGNWCLFQASKYALGRRLT*TLTSFL
Trigger: AAGAAAGCTCGTAAGAGTGCAAGTAAGCCTCCTCCC...AAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp AGTCAGCCTGCTATCATTCCGGCTGCAGCCTTGGAGCAGGCAAGATCTCCACCCATCAGCTGTCCTAATTaGATTCTGTTGACCACTACT +
Preference number: 4 (lower is better)
Translates to: SQPAIIPAAALEQARSPPISCPN*ILLTTT
Trigger: AGTAGTGGTCAACAGAATCCAATTAGGACAGCTGAT...GGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCAGGCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS-3UTR CCA 90 bp GCCCGTAAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGTTACTGAGAGCGTGTTaGTCATTAGTCTTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: ARKMPQAQPELSRGWDDQLLRAC*SLVFLS
Trigger: ACTTAAAAAGACTAATGACCAACACGCTCTCAGTAA...CTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTTACGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp AAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGACTGAGGCTGTTTTCTaGATAGTTTCTTCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: KMPQAQPELSRGWDDQQQTEAVF*IVSSSV
Trigger: GACACTTGAAGAAACTATCCAGAAAACAGCCTCAGT...CTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp AAAGTTTACATTCCACAGCACTCTACCGGTGTAACAAACAGGCGTAGGCTCTTACGATGGAGGGCCTGCTaGTGGCTTACTGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: KVYIPQHSTGVTNRRRLLRWRAC*WLTDGR
Trigger: CCTCCCATCAGTAAGCCACCAGCAGGCCCTCCATCG...TAAGAGCCTACGCCTGTTTGTTACACCGGTAGAGTGCTGTGGAATGTAAACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp AAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGTGCATGCAGACTCACTaGCAATATCAATTGGATATG +
Preference number: 4 (lower is better)
Translates to: KMPQAQPELSRGWDDQQQCMQTH*QYQLDM
Trigger: CATATCCAATTGATATTGCCAGTGAGTCTGCATGCA...CTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp AGTCAGCCTGCTATCATTCCGGCTGCAGCCTTGGAGCAGGCAAGATCTCCACCCTGCATGCAGACTCACTaGCAATATCAATTGGATATG +
Preference number: 4 (lower is better)
Translates to: SQPAIIPAAALEQARSPPCMQTH*QYQLDM
Trigger: CATATCCAATTGATATTGCCAGTGAGTCTGCATGCA...GGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCAGGCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp ACGACCAGCAACAGGGAGGAGCTACCCTCTCTGCTAAGAGCTTCAGAGACCTGTTTCACTTGGTACTGGTaGTGGGATATGACTATCTCC +
Preference number: 4 (lower is better)
Translates to: TTSNREELPSLLRASETCFTWYW*WDMTIS
Trigger: GGAGATAGTCATATCCCACCACCAGTACCAAGTGAA...ACAGGTCTCTGAAGCTCTTAGCAGAGAGGGTAGCTCCTCCCTGTTGCTGGTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp GGGCAAAGCGCCACGAGCAACAGGTTTCCAGGGGAAGAAAACCACCACAAAGATAGTACGAGGGGCAACTaGTATATCTTTAGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: GQSATSNRFPGEENHHKDSTRGN*YIFRVS
Trigger: ACTCACCCTAAAGATATATCAGTTGCCCCTCGTACT...ATCTTTGTGGTGGTTTTCTTCCCCTGGAAACCTGTTGCTCGTGGCGCTTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp TGCAGGCTCGGAAGTGCTTGCCTCTGCAGCTTGGCTTCTCCCTGCTATTGGCACGTGAATCCTTATAGCTaGTTTCTAAGCTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: CRLGSACLCSLASPCYWHVNPYS*FLSSSF
Trigger: AAAGGAAGAGCTTAGAAAGCAGCTATAAGGATTCAC...GTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCAAGCACTTCCGAGCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS-3UTR GCA 90 bp AAAGTTTACATTCCACAGCACTCTACCGGTGTAACAAACAGGCGTAGGCTCTTAGTGCTCCAGTCAGCCTaGTATCATTCCGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KVYIPQHSTGVTNRRRLLVLQSA*YHSGCS
Trigger: GCTGCAGCCGGAATGATAGCAGGCTGACTGGAGCAC...TAAGAGCCTACGCCTGTTTGTTACACCGGTAGAGTGCTGTGGAATGTAAACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp GCCGACACAGGGGAGCTGCTCACTGTGGGTCTCCTTCTGAGCTGTTCTAACACTACATTTGCTCTCCAGTaGCATTTCCAGTTTAGATGT +
Preference number: 4 (lower is better)
Translates to: ADTGELLTVGLLLSCSNTTFALQ*HFQFRC
Trigger: ACATCTAAACTGGAAATGCCACTGGAGAGCAAATGT...AGTGTTAGAACAGCTCAGAAGGAGACCCACAGTGAGCAGCTCCCCTGTGTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS-3UTR CCA 90 bp ACGACCAGCAACAGGGAGGAGCTACCCTCTCTGCTAAGAGCTTCAGAGACCTGTGAATTCACTTGGTACTaGTGGTGGGATATGACTATC +
Preference number: 4 (lower is better)
Translates to: TTSNREELPSLLRASETCEFTWY*WWDMTI
Trigger: GATAGTCATATCCCACCACCAGTACCAAGTGAATTC...ACAGGTCTCTGAAGCTCTTAGCAGAGAGGGTAGCTCCTCCCTGTTGCTGGTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp ACGACCAGCAACAGGGAGGAGCTACCCTCTCTGCTAAGAGCTTCAGAGACCTGTATTTGTCTGCATATCTaGACACAGGACAAGAACTCG +
Preference number: 4 (lower is better)
Translates to: TTSNREELPSLLRASETCICLHI*TQDKNS
Trigger: CGAGTTCTTGTCCTGTGTCCAGATATGCAGACAAAT...ACAGGTCTCTGAAGCTCTTAGCAGAGAGGGTAGCTCCTCCCTGTTGCTGGTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp ACGACCAGCAACAGGGAGGAGCTACCCTCTCTGCTAAGAGCTTCAGAGACCTGTCATCTAAGCTGGGGCTaGAGGCTAATAAAAATTTCA +
Preference number: 4 (lower is better)
Translates to: TTSNREELPSLLRASETCHLSWG*RLIKIS
Trigger: TGAAATTTTTATTAGCCTTCAGCCCCAGCTTAGATG...ACAGGTCTCTGAAGCTCTTAGCAGAGAGGGTAGCTCCTCCCTGTTGCTGGTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp GCCGACACAGGGGAGCTGCTCACTGTGGGTCTCCTTCTGAGCTGTTCTAACACTAGGAATTGTTTTAACTaGGCGTCCTTCTCAATTTCT +
Preference number: 4 (lower is better)
Translates to: ADTGELLTVGLLLSCSNTRNCFN*ASFSIS
Trigger: AGAAATTGAGAAGGACGCTCAGTTAAAACAATTCCT...AGTGTTAGAACAGCTCAGAAGGAGACCCACAGTGAGCAGCTCCCCTGTGTCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp AAAGTTTACATTCCACAGCACTCTACCGGTGTAACAAACAGGCGTAGGCTCTTACTGCTGGTGGCTTACTaGTGGGAGGAGGCTTACTTG +
Preference number: 4 (lower is better)
Translates to: KVYIPQHSTGVTNRRRLLLLVAY*WEEAYL
Trigger: CAAGTAAGCCTCCTCCCATCAGTAAGCCACCAGCAG...TAAGAGCCTACGCCTGTTTGTTACACCGGTAGAGTGCTGTGGAATGTAAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp GCCGACACAGGGGAGCTGCTCACTGTGGGTCTCCTTCTGAGCTGTTCTAACACTAGATATTCATCGAAATaGGGTAGGTCTAATGTGTCA +
Preference number: 4 (lower is better)
Translates to: ADTGELLTVGLLLSCSNTRYSSK*GRSNVS
Trigger: TGACACATTAGACCTACCTCATTTCGATGAATATCT...AGTGTTAGAACAGCTCAGAAGGAGACCCACAGTGAGCAGCTCCCCTGTGTCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp ACGACCAGCAACAGGGAGGAGCTACCCTCTCTGCTAAGAGCTTCAGAGACCTGTACTGAGGCTGTTTTCTaGATAGTTTCTTCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: TTSNREELPSLLRASETCTEAVF*IVSSSV
Trigger: GACACTTGAAGAAACTATCCAGAAAACAGCCTCAGT...ACAGGTCTCTGAAGCTCTTAGCAGAGAGGGTAGCTCCTCCCTGTTGCTGGTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp ACGACCAGCAACAGGGAGGAGCTACCCTCTCTGCTAAGAGCTTCAGAGACCTGTATCATTGAATTCACTTaGTACTGGTGGTGGGATATG +
Preference number: 4 (lower is better)
Translates to: TTSNREELPSLLRASETCIIEFT*YWWWDM
Trigger: CATATCCCACCACCAGTACCAAGTGAATTCAATGAT...ACAGGTCTCTGAAGCTCTTAGCAGAGAGGGTAGCTCCTCCCTGTTGCTGGTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp AGTCAGCCTGCTATCATTCCGGCTGCAGCCTTGGAGCAGGCAAGATCTCCACCCATGGATTTTTCTTGGTaGGGCTACAATAATTATGGT +
Preference number: 4 (lower is better)
Translates to: SQPAIIPAAALEQARSPPMDFSW*GYNNYG
Trigger: ACCATAATTATTGTAGCCCCACCAAGAAAAATCCAT...GGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCAGGCTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp TGCAGGCTCGGAAGTGCTTGCCTCTGCAGCTTGGCTTCTCCCTGCTATTGGCACCACATGGATTTTTCTTaGTGGGGCTACAATAATTAT +
Preference number: 4 (lower is better)
Translates to: CRLGSACLCSLASPCYWHHMDFS*WGYNNY
Trigger: ATAATTATTGTAGCCCCACCAAGAAAAATCCATGTG...GTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCAAGCACTTCCGAGCCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp GGGCAAAGCGCCACGAGCAACAGGTTTCCAGGGGAAGAAAACCACCACAAAGATGATATATCTTTAGGGTaGGTTACTGAGGCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: GQSATSNRFPGEENHHKDDISLG*VTEAVS
Trigger: TGAAACAGCCTCAGTAACTCACCCTAAAGATATATC...ATCTTTGTGGTGGTTTTCTTCCCCTGGAAACCTGTTGCTCGTGGCGCTTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp CGAGCAACAGGTTTCCAGGGGAAGAAAACCACCACAAAGATCACTCATAACACTGAGTTGAGCTCCACATaGGGTGCTTCCAGACTTTTC +
Preference number: 4 (lower is better)
Translates to: RATGFQGKKTTTKITHNTELSST*GASRLF
Trigger: GAAAAGTCTGGAAGCACCTCATGTGGAGCTCAACTC...AGTGTTATGAGTGATCTTTGTGGTGGTTTTCTTCCCCTGGAAACCTGTTGCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp ACGACCAGCAACAGGGAGGAGCTACCCTCTCTGCTAAGAGCTTCAGAGACCTGTGTAAGAAAGATTACATaGTTCATGGGCAGAACCAAA +
Preference number: 4 (lower is better)
Translates to: TTSNREELPSLLRASETCVRKIT*FMGRTK
Trigger: TTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTAC...ACAGGTCTCTGAAGCTCTTAGCAGAGAGGGTAGCTCCTCCCTGTTGCTGGTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp AGGCCACACAACCATAAGGAAAACTGTCACACATTCATATACCGTATACAACTTCCGAGGCCCGTAAAATaGCCCAGGCTCAGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: RPHNHKENCHTFIYRIQLPRPVK*PRLSQN
Trigger: GTTCTGGCTGAGCCTGGGGCATTTTACGGGCCTCGG...AAGTTGTATACGGTATATGAATGTGTGACAGTTTTCCTTATGGTTGTGTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp AGGCCACACAACCATAAGGAAAACTGTCACACATTCATATACCGTATACAACTTGGGCACTCCCCTTCTTaGTACCGGGTCGATCGGAAC +
Preference number: 4 (lower is better)
Translates to: RPHNHKENCHTFIYRIQLGHSPS*YRVDRN
Trigger: GTTCCGATCGACCCGGTACCAAGAAGGGGAGTGCCC...AAGTTGTATACGGTATATGAATGTGTGACAGTTTTCCTTATGGTTGTGTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp AGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTCCTCCCCCGTTACTGAGAGCGTGTTaGTCATTAGTCTTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: RSGNWCLFQASKYALPPPLLRAC*SLVFLS
Trigger: ACTTAAAAAGACTAATGACCAACACGCTCTCAGTAA...CGGGGGAGGAAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp AGGCCACACAACCATAAGGAAAACTGTCACACATTCATATACCGTATACAACTTTGGAGGGCCTGCTGGTaGCTTACTGATGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RPHNHKENCHTFIYRIQLWRACW*LTDGRR
Trigger: CCTCCTCCCATCAGTAAGCCACCAGCAGGCCCTCCA...AAGTTGTATACGGTATATGAATGTGTGACAGTTTTCCTTATGGTTGTGTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp ATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTAAACCTTGCACGATGGAGGGCCTGCTaGTGGCTTACTGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: MCKKDYMLHGQNQRLNLARWRAC*WLTDGR
Trigger: CCTCCCATCAGTAAGCCACCAGCAGGCCCTCCATCG...TGCAAGGTTTAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp GCCGACACAGGGGAGCTGCTCACTGTGGGTCTCCTTCTGAGCTGTTCTAACACTATGGATTTTTCTTGGTaGGGCTACAATAATTATGGT +
Preference number: 4 (lower is better)
Translates to: ADTGELLTVGLLLSCSNTMDFSW*GYNNYG
Trigger: ACCATAATTATTGTAGCCCCACCAAGAAAAATCCAT...AGTGTTAGAACAGCTCAGAAGGAGACCCACAGTGAGCAGCTCCCCTGTGTCGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp TGCCTCTGCAGCTTGGCTTCTCCCTGCTATTGGCACCAGCTCTCAGATCAAAGCAGATTACATGCTTCATaGGCAGAACCAAAGGTTAAA +
Preference number: 4 (lower is better)
Translates to: CLCSLASPCYWHQLSDQSRLHAS*AEPKVK
Trigger: TTTAACCTTTGGTTCTGCCCATGAAGCATGTAATCT...GCTTTGATCTGAGAGCTGGTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp CCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTAGGAATTGTTTTAACTaGGCGTCCTTCTCAATTTCT +
Preference number: 4 (lower is better)
Translates to: PTCRSGNWCLFQASKYALRNCFN*ASFSIS
Trigger: AGAAATTGAGAAGGACGCTCAGTTAAAACAATTCCT...AAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACAGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp TGCCTCTGCAGCTTGGCTTCTCCCTGCTATTGGCACCAGCTCTCAGATCAAAGCTTCAGCTGTACTGACTaGATGTTTGTATTTACAACT +
Preference number: 4 (lower is better)
Translates to: CLCSLASPCYWHQLSDQSFSCTD*MFVFTT
Trigger: AGTTGTAAATACAAACATGCAGTCAGTACAGCTGAA...GCTTTGATCTGAGAGCTGGTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp CGAGCAACAGGTTTCCAGGGGAAGAAAACCACCACAAAGATCACTCATAACACTCGAACTGTTCTGCTTTaGGGGGAAGACATAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RATGFQGKKTTTKITHNTRTVLL*GEDIRA
Trigger: TGCTCTTATGTCTTCCCCGCAAAGCAGAACAGTTCG...AGTGTTATGAGTGATCTTTGTGGTGGTTTTCTTCCCCTGGAAACCTGTTGCTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp ATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTAAACCTTGCAGAACTGAGCAGAGGGTaGGACGACCAGCAACAGGGA +
Preference number: 4 (lower is better)
Translates to: MCKKDYMLHGQNQRLNLAELSRG*DDQQQG
Trigger: TCCCTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTC...TGCAAGGTTTAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp AAAGTTTACATTCCACAGCACTCTACCGGTGTAACAAACAGGCGTAGGCTCTTAGTACATCCTTCATTTTaGGGGGAAGGTCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: KVYIPQHSTGVTNRRRLLVHPSF*GEGLPV
Trigger: AACTGGCAGACCTTCCCCTCAAAATGAAGGATGTAC...TAAGAGCCTACGCCTGTTTGTTACACCGGTAGAGTGCTGTGGAATGTAAACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS-3UTR TCA 90 bp CGAGCAACAGGTTTCCAGGGGAAGAAAACCACCACAAAGATCACTCATAACACTGTCAGAGAGTCTGGCTaGACTTCACATGGATTTTTC +
Preference number: 4 (lower is better)
Translates to: RATGFQGKKTTTKITHNTVRESG*TSHGFF
Trigger: GAAAAATCCATGTGAAGTTCAGCCAGACTCTCTGAC...AGTGTTATGAGTGATCTTTGTGGTGGTTTTCTTCCCCTGGAAACCTGTTGCTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp ATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTAAACCTTGCATTCTCTGCTGAGAGCTaGGAGGAGTCACCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: MCKKDYMLHGQNQRLNLAFSAES*EESPSP
Trigger: TGGAGAGGGTGACTCCTCTCAGCTCTCAGCAGAGAA...TGCAAGGTTTAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp AGGCCACACAACCATAAGGAAAACTGTCACACATTCATATACCGTATACAACTTAGGCTCGGAAGTGCTTaGCTCTGCAGCTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RPHNHKENCHTFIYRIQLRLGSA*LCSLAS
Trigger: AGAAGCCAAGCTGCAGAGGCAAGCACTTCCGAGCCT...AAGTTGTATACGGTATATGAATGTGTGACAGTTTTCCTTATGGTTGTGTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp CGAGCAACAGGTTTCCAGGGGAAGAAAACCACCACAAAGATCACTCATAACACTCCCTGGTCCAATCACTaGCAAACCATTTCCAATCTT +
Preference number: 4 (lower is better)
Translates to: RATGFQGKKTTTKITHNTPWSNH*QTISNL
Trigger: AAGATTGGAAATGGTTTGCCAGTGATTGGACCAGGG...AGTGTTATGAGTGATCTTTGTGGTGGTTTTCTTCCCCTGGAAACCTGTTGCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS-3UTR CCA 90 bp CGAGCAACAGGTTTCCAGGGGAAGAAAACCACCACAAAGATCACTCATAACACTTTACATGGACCAAAATaGGCAGCATTAAGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RATGFQGKKTTTKITHNTLHGPK*AALSGC
Trigger: GCACCCACTTAATGCTGCCCATTTTGGTCCATGTAA...AGTGTTATGAGTGATCTTTGTGGTGGTTTTCTTCCCCTGGAAACCTGTTGCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp CGAGCAACAGGTTTCCAGGGGAAGAAAACCACCACAAAGATCACTCATAACACTGCTTTCTTGGATACGTaGCTGGCCTTCTGGTTTATA +
Preference number: 4 (lower is better)
Translates to: RATGFQGKKTTTKITHNTAFLDT*LAFWFI
Trigger: TATAAACCAGAAGGCCAGCCACGTATCCAAGAAAGC...AGTGTTATGAGTGATCTTTGTGGTGGTTTTCTTCCCCTGGAAACCTGTTGCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp AGGCCACACAACCATAAGGAAAACTGTCACACATTCATATACCGTATACAACTTTGTGCCATTAGACGATaGAGGGCCTGCTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RPHNHKENCHTFIYRIQLCAIRR*RACWWL
Trigger: AAGCCACCAGCAGGCCCTCCATCGTCTAATGGCACA...AAGTTGTATACGGTATATGAATGTGTGACAGTTTTCCTTATGGTTGTGTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp AGGCCACACAACCATAAGGAAAACTGTCACACATTCATATACCGTATACAACTTCTTGCCTCTGCAGCTTaGCTTCTCCCTGCTATTGGC +
Preference number: 4 (lower is better)
Translates to: RPHNHKENCHTFIYRIQLLASAA*LLPAIG
Trigger: GCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCAAG...AAGTTGTATACGGTATATGAATGTGTGACAGTTTTCCTTATGGTTGTGTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp CGAGCAACAGGTTTCCAGGGGAAGAAAACCACCACAAAGATCACTCATAACACTTCTGGGAAACATCATTaGATTCACTTGGTACTGGTG +
Preference number: 4 (lower is better)
Translates to: RATGFQGKKTTTKITHNTSGKHH*IHLVLV
Trigger: CACCAGTACCAAGTGAATTCAATGATGTTTCCCAGA...AGTGTTATGAGTGATCTTTGTGGTGGTTTTCTTCCCCTGGAAACCTGTTGCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp AAAGTTTACATTCCACAGCACTCTACCGGTGTAACAAACAGGCGTAGGCTCTTAACTTGGTACTGGTGGTaGGATATGACTATCTCCCAT +
Preference number: 4 (lower is better)
Translates to: KVYIPQHSTGVTNRRRLLTWYWW*DMTISH
Trigger: ATGGGAGATAGTCATATCCCACCACCAGTACCAAGT...TAAGAGCCTACGCCTGTTTGTTACACCGGTAGAGTGCTGTGGAATGTAAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp AAAGTTTACATTCCACAGCACTCTACCGGTGTAACAAACAGGCGTAGGCTCTTAAGAACAACCTGCCTATaGATAGAAGCTATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: KVYIPQHSTGVTNRRRLLRTTCL*IEAILS
Trigger: GGAGAGGATAGCTTCTATCCATAGGCAGGTTGTTCT...TAAGAGCCTACGCCTGTTTGTTACACCGGTAGAGTGCTGTGGAATGTAAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp AAAGTTTACATTCCACAGCACTCTACCGGTGTAACAAACAGGCGTAGGCTCTTATTCATATGCCTGTTTTaGTATTGGTGTCCACACTGC +
Preference number: 4 (lower is better)
Translates to: KVYIPQHSTGVTNRRRLLFICLF*YWCPHC
Trigger: GCAGTGTGGACACCAATATCAAAACAGGCATATGAA...TAAGAGCCTACGCCTGTTTGTTACACCGGTAGAGTGCTGTGGAATGTAAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp CGAGCAACAGGTTTCCAGGGGAAGAAAACCACCACAAAGATCACTCATAACACTTTCAAATTAGATACCTaGGATGTGACACGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: RATGFQGKKTTTKITHNTFKLDT*DVTRSG
Trigger: ACCAGAACGTGTCACATCTCAGGTATCTAATTTGAA...AGTGTTATGAGTGATCTTTGTGGTGGTTTTCTTCCCCTGGAAACCTGTTGCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp CGAGCAACAGGTTTCCAGGGGAAGAAAACCACCACAAAGATCACTCATAACACTTTAGATGTTGTGGTTTaGGAATCTGCTGTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: RATGFQGKKTTTKITHNTLDVVV*ESAVVS
Trigger: AGAAACTACAGCAGATTCTCAAACCACAACATCTAA...AGTGTTATGAGTGATCTTTGTGGTGGTTTTCTTCCCCTGGAAACCTGTTGCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp ATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTAAACCTTGCAGCAGCATTAAGTGGGTaGCACTCAGGGATGACATTT +
Preference number: 4 (lower is better)
Translates to: MCKKDYMLHGQNQRLNLAAALSG*HSGMTF
Trigger: AAATGTCATCCCTGAGTGGCACCCACTTAATGCTGC...TGCAAGGTTTAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp AGGCCACACAACCATAAGGAAAACTGTCACACATTCATATACCGTATACAACTTTCTGGACAATCTGCCTaGGAACAGAAGCTACCTTCT +
Preference number: 4 (lower is better)
Translates to: RPHNHKENCHTFIYRIQLSGQSA*EQKLPS
Trigger: AGAAGGTAGCTTCTGTTCGCAGGCAGATTGTCCAGA...AAGTTGTATACGGTATATGAATGTGTGACAGTTTTCCTTATGGTTGTGTGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp CGAGCAACAGGTTTCCAGGGGAAGAAAACCACCACAAAGATCACTCATAACACTTTCAGCTGTACTGACTaGATGTTTGTATTTACAACT +
Preference number: 4 (lower is better)
Translates to: RATGFQGKKTTTKITHNTFSCTD*MFVFTT
Trigger: AGTTGTAAATACAAACATGCAGTCAGTACAGCTGAA...AGTGTTATGAGTGATCTTTGTGGTGGTTTTCTTCCCCTGGAAACCTGTTGCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp ATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTAAACCTTGCAAGTAACAAGGTTTCTTaGCCTCCTCTGTATGGAGAG +
Preference number: 4 (lower is better)
Translates to: MCKKDYMLHGQNQRLNLASNKVS*PPLYGE
Trigger: CTCTCCATACAGAGGAGGGCAAGAAACCTTGTTACT...TGCAAGGTTTAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp GTGATTTTAATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTAAAACACCAGGAACAGTaGTGCATGCAGACTCACTGG +
Preference number: 4 (lower is better)
Translates to: VILMCKKDYMLHGQNQRLKHQEQ*CMQTHW
Trigger: CCAGTGAGTCTGCATGCACCACTGTTCCTGGTGTTT...TAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACATTAAAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp GTGATTTTAATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTACCCCACCATGTGGAGTaGAGATATCCCTATATCAGT +
Preference number: 4 (lower is better)
Translates to: VILMCKKDYMLHGQNQRLPHHVE*RYPYIS
Trigger: ACTGATATAGGGATATCTTCACTCCACATGGTGGGG...TAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACATTAAAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS-3UTR GCA 90 bp AGGCCACACAACCATAAGGAAAACTGTCACACATTCATATACCGTATACAACTTTTTAACTCTTCCGAGTaGACCAAAGCTGACAGGATA +
Preference number: 4 (lower is better)
Translates to: RPHNHKENCHTFIYRIQLFNSSE*TKADRI
Trigger: TATCCTGTCAGCTTTGGTGCACTCGGAAGAGTTAAA...AAGTTGTATACGGTATATGAATGTGTGACAGTTTTCCTTATGGTTGTGTGGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS-3UTR CCA 90 bp AAAGTTTACATTCCACAGCACTCTACCGGTGTAACAAACAGGCGTAGGCTCTTAAAGAGCTTTTCAATGTaGGTTTCTAGTTTTAAGAGC +
Preference number: 4 (lower is better)
Translates to: KVYIPQHSTGVTNRRRLLKSFSM*VSSFKS
Trigger: GCTCTTAAAACTAGAAACCCACATTGAAAAGCTCTT...TAAGAGCCTACGCCTGTTTGTTACACCGGTAGAGTGCTGTGGAATGTAAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp GTGATTTTAATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTAGGCTTATGTGGAGTGTaGCATTCTTCCAAATCAGGA +
Preference number: 4 (lower is better)
Translates to: VILMCKKDYMLHGQNQRLGLCGV*HSSKSG
Trigger: TCCTGATTTGGAAGAATGTCACACTCCACATAAGCC...TAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACATTAAAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS-3UTR TCA 90 bp AGGCCACACAACCATAAGGAAAACTGTCACACATTCATATACCGTATACAACTTCTAATTGGATTCTGTTaGCCACTACTATCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: RPHNHKENCHTFIYRIQLLIGFC*PLLSGK
Trigger: CTTACCTGATAGTAGTGGTCAACAGAATCCAATTAG...AAGTTGTATACGGTATATGAATGTGTGACAGTTTTCCTTATGGTTGTGTGGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS-3UTR TCA 90 bp ATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTAAACCTTGCATTCAAATTAGATACCTaGGATGTGACACGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: MCKKDYMLHGQNQRLNLAFKLDT*DVTRSG
Trigger: ACCAGAACGTGTCACATCTCAGGTATCTAATTTGAA...TGCAAGGTTTAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp AGGCCACACAACCATAAGGAAAACTGTCACACATTCATATACCGTATACAACTTAAATACCCCACCATGTaGAGTGAAGATATCCCTATA +
Preference number: 4 (lower is better)
Translates to: RPHNHKENCHTFIYRIQLKYPTM*SEDIPI
Trigger: TATAGGGATATCTTCACTCCACATGGTGGGGTATTT...AAGTTGTATACGGTATATGAATGTGTGACAGTTTTCCTTATGGTTGTGTGGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS-3UTR CCA 90 bp AGGCCACACAACCATAAGGAAAACTGTCACACATTCATATACCGTATACAACTTTTTCTGAGGCTTATGTaGAGTGTGACATTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: RPHNHKENCHTFIYRIQLFLRLM*SVTFFQ
Trigger: TTGGAAGAATGTCACACTCCACATAAGCCTCAGAAA...AAGTTGTATACGGTATATGAATGTGTGACAGTTTTCCTTATGGTTGTGTGGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS-3UTR CCA 90 bp ATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTAAACCTTGCAGTTGCAATTGTTACATaGACCAAAATGGGCAGCATT +
Preference number: 4 (lower is better)
Translates to: MCKKDYMLHGQNQRLNLAVAIVT*TKMGSI
Trigger: AATGCTGCCCATTTTGGTCCATGTAACAATTGCAAC...TGCAAGGTTTAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp ATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTAAACCTTGCAATCATTGAATTCACTTaGTACTGGTGGTGGGATATG +
Preference number: 4 (lower is better)
Translates to: MCKKDYMLHGQNQRLNLAIIEFT*YWWWDM
Trigger: CATATCCCACCACCAGTACCAAGTGAATTCAATGAT...TGCAAGGTTTAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp ATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTAAACCTTGCATTAGATGTTGTGGTTTaGGAATCTGCTGTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: MCKKDYMLHGQNQRLNLALDVVV*ESAVVS
Trigger: AGAAACTACAGCAGATTCTCAAACCACAACATCTAA...TGCAAGGTTTAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp ATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTAAACCTTGCAGTTTCTATTATGAGCTaGAACACAGAGTGGCATAAA +
Preference number: 4 (lower is better)
Translates to: MCKKDYMLHGQNQRLNLAVSIMS*NTEWHK
Trigger: TTTATGCCACTCTGTGTTTCAGCTCATAATAGAAAC...TGCAAGGTTTAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp GTGATTTTAATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTATATTGGTGTCCACACTaGGAACATTCAAAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: VILMCKKDYMLHGQNQRLYWCPH*EHSKSQ
Trigger: TTGGGACTTTGAATGTTCGCAGTGTGGACACCAATA...TAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACATTAAAATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR GCA 90 bp ATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTAAACCTTGCAGTAAGAAAGATTACATaGTTCATGGGCAGAACCAAA +
Preference number: 4 (lower is better)
Translates to: MCKKDYMLHGQNQRLNLAVRKIT*FMGRTK
Trigger: TTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTAC...TGCAAGGTTTAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
3UTR CAA 72 bp GCTTCATGGGCAGAACCAAAGGTTAAACCTTGCATTTaGTTCATGGTTATTACACAAGTAATTACACAAGTC +
Preference number: 4 (lower is better)
Translates to: ASWAEPKVKPCI*FMVITQVITQV
Trigger: GACTTGTGTAATTACTTGTGTAATAACCATGAACAAAATGCAAGGTTTAACCTTTGGTTCTGCCCATGAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR TCA 90 bp GTGATTTTAATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTAGATATATCTTTAGGGTaGGTTACTGAGGCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: VILMCKKDYMLHGQNQRLDISLG*VTEAVS
Trigger: TGAAACAGCCTCAGTAACTCACCCTAAAGATATATC...TAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACATTAAAATCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp GTGATTTTAATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTAGTTGCAATTGTTACATaGACCAAAATGGGCAGCATT +
Preference number: 4 (lower is better)
Translates to: VILMCKKDYMLHGQNQRLVAIVT*TKMGSI
Trigger: AATGCTGCCCATTTTGGTCCATGTAACAATTGCAAC...TAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACATTAAAATCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CCA 90 bp GTGATTTTAATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTAAGATTACATGCTTCATaGGCAGAACCAAAGGTTAAA +
Preference number: 4 (lower is better)
Translates to: VILMCKKDYMLHGQNQRLRLHAS*AEPKVK
Trigger: TTTAACCTTTGGTTCTGCCCATGAAGCATGTAATCT...TAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACATTAAAATCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS GCA 90 bp CCTCCGCAGAGGCGTGGCTGTCCGCCCTGTGGCCGCAGACGCAGTTaGGACTGCGGCGACGAGGAGGGGCGGGGCCGGTGGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: PPQRRGCPPCGRRRS*DCGDEEGRGRWLLS
Trigger: GCTCAGCAGCCACCGGCCCCGCCCCTCCTCGTCGCCGCAGTCGCAACTGCGTCTGCGGCCACAGGGCGGACAGCCACGCCTCTGCGGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465952.5
CDS TCA 90 bp CTGCTGCACGCTGGGCCTGAAAGGACGGTGGCGTGGCGGGGAAGGTaGAGACGTGAGCACTTCCGGTCGCCCTCCGCAGAGGCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: LLHAGPERTVAWRGR*RREHFRSPSAEAWL
Trigger: CAGCCACGCCTCTGCGGAGGGCGACCGGAAGTGCTCACGTCTTCACCTTCCCCGCCACGCCACCGTCCTTTCAGGCCCAGCGTGCAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465952.5
CDS TCA 90 bp GCTCCTCCCCCACTCGCGTCTCCACTAGGAAGGCGGCTTCCGGCTTaGGTCCGCGGCAAAAGAGTCCTCCTTCCTGCTGCACGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: APPPLASPLGRRLPA*VRGKRVLLPAARWA
Trigger: GGCCCAGCGTGCAGCAGGAAGGAGGACTCTTTTGCCGCGGACTCAAGCCGGAAGCCGCCTTCCTAGTGGAGACGCGAGTGGGGGAGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465952.5
CDS GCA 90 bp GCGGCTTCCGGCTTGAGTCCGCGGCAAAAGAGTCCTCCTTCCTGCTaGACGCTGGGCCTGAAAGGACGGTGGCGTGGCGGGGAAGGTGAA +
Preference number: 5 (lower is better)
Translates to: AASGLSPRQKSPPSC*TLGLKGRWRGGEGE
Trigger: TTCACCTTCCCCGCCACGCCACCGTCCTTTCAGGCCCAGCGTGCAGCAGGAAGGAGGACTCTTTTGCCGCGGACTCAAGCCGGAAGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465952.5
CDS GCA 90 bp AAGGCGGCTTCCGGCTTGAGTCCGCGGCAAAAGAGTCCTCCTTCCTaGTGCACGCTGGGCCTGAAAGGACGGTGGCGTGGCGGGGAAGGT +
Preference number: 5 (lower is better)
Translates to: KAASGLSPRQKSPPS*CTLGLKGRWRGGEG
Trigger: ACCTTCCCCGCCACGCCACCGTCCTTTCAGGCCCAGCGTGCAGCAGGAAGGAGGACTCTTTTGCCGCGGACTCAAGCCGGAAGCCGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465952.5
CDS GCA 90 bp GATCTCCACCCTAGTTGCAACGTTCAACCCACGTTCCCCTCGGACTaGTCCTCCCCCACTCGCGTCTCCACTAGGAAGGCGGCTTCCGGC +
Preference number: 5 (lower is better)
Translates to: DLHPSCNVQPTFPSD*SSPTRVSTRKAASG
Trigger: GCCGGAAGCCGCCTTCCTAGTGGAGACGCGAGTGGGGGAGGAGCAGTCCGAGGGGAACGTGGGTTGAACGTTGCAACTAGGGTGGAGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465952.5
CDS CCA 90 bp CAAAAGAGTCCTCCTTCCTGCTGCACGCTGGGCCTGAAAGGACGGTaGCGTGGCGGGGAAGGTGAAGACGTGAGCACTTCCGGTCGCCCT +
Preference number: 5 (lower is better)
Translates to: QKSPPSCCTLGLKGR*RGGEGEDVSTSGRP
Trigger: AGGGCGACCGGAAGTGCTCACGTCTTCACCTTCCCCGCCACGCCACCGTCCTTTCAGGCCCAGCGTGCAGCAGGAAGGAGGACTCTTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465952.5
CDS-3UTR CAA 90 bp AGTCAGCCTGCTATCATTCCGGCTGCAGCCTTGGAGCAGGCAAGATCTCCACCCCGGGCACTCCCCTTCTaGGTACCGGGTCGATCGGAA +
Preference number: 5 (lower is better)
Translates to: SQPAIIPAAALEQARSPPRALPF*VPGRSE
Trigger: TTCCGATCGACCCGGTACCAAGAAGGGGAGTGCCCG...GGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCAGGCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS GCA 90 bp CCGGGTCGATCGGAACTCCTGTTCCAGCTTGATCTCCACCCTAGTTaGAACGTTCAACCCACGTTCCCCTCGGACTGCTCCTCCCCCACT +
Preference number: 5 (lower is better)
Translates to: PGRSELLFQLDLHPS*NVQPTFPSDCSSPT
Trigger: AGTGGGGGAGGAGCAGTCCGAGGGGAACGTGGGTTGAACGTTGCAACTAGGGTGGAGATCAAGCTGGAACAGGAGTTCCGATCGACCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255304.9
ENST00000465952.5
ENST00000614860.1
CDS-3UTR CAA 90 bp AGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTCCTCCCCCGCGGGCACTCCCCTTCTaGGTACCGGGTCGATCGGAA +
Preference number: 5 (lower is better)
Translates to: RSGNWCLFQASKYALPPPRALPF*VPGRSE
Trigger: TTCCGATCGACCCGGTACCAAGAAGGGGAGTGCCCG...CGGGGGAGGAAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp CTGAGGGCCAGGCTGCCAGTCCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCGGCTTCTCCCTGCTATaGGCACCAGCTCTCAGATCA +
Preference number: 5 (lower is better)
Translates to: LRARLPVPPVGVGTGAFSGFSLL*APALRS
Trigger: TGATCTGAGAGCTGGTGCCAATAGCAGGGAGAAGCC...GGAAAAGGCACCAGTTCCCACTCCTACAGGTGGGACTGGCAGCCTGGCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp CCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGGGAGGAAACTCCTGTTCCAGCTaGATCTCCACCCTAGTTGCA +
Preference number: 5 (lower is better)
Translates to: PQAQPELSRGWDDQQQGGNSCSS*ISTLVA
Trigger: TGCAACTAGGGTGGAGATCAAGCTGGAACAGGAGTT...TCCTCCCTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp AAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGTTTGGGGGCCTGCTTTaGCAGGCTCGGAAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: KMPQAQPELSRGWDDQQQFGGLL*QARKCL
Trigger: CAAGCACTTCCGAGCCTGCAAAAGCAGGCCCCCAAA...CTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CCA 90 bp AGCATGTGGGTGGGCAGCTGTGCCATTAGACGATGGAGGGCCTGCTaGTGGCTTACTGATGGGAGGAGGCTTACTTGCACTCTTACGAGC +
Preference number: 5 (lower is better)
Translates to: SMWVGSCAIRRWRAC*WLTDGRRLTCTLTS
Trigger: GCTCGTAAGAGTGCAAGTAAGCCTCCTCCCATCAGTAAGCCACCAGCAGGCCCTCCATCGTCTAATGGCACAGCTGCCCACCCACATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS GCA 90 bp ATGAGCATGTGGGTGGGCAGCTGTGCCATTAGACGATGGAGGGCCTaGTGGTGGCTTACTGATGGGAGGAGGCTTACTTGCACTCTTACG +
Preference number: 5 (lower is better)
Translates to: MSMWVGSCAIRRWRA*WWLTDGRRLTCTLT
Trigger: CGTAAGAGTGCAAGTAAGCCTCCTCCCATCAGTAAGCCACCAGCAGGCCCTCCATCGTCTAATGGCACAGCTGCCCACCCACATGCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp TGCAGGCTCGGAAGTGCTTGCCTCTGCAGCTTGGCTTCTCCCTGCTATTGGCACCTCTTACGAGCTTTCTaGGATACGTGGCTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: CRLGSACLCSLASPCYWHLLRAF*DTWLAF
Trigger: GAAGGCCAGCCACGTATCCAAGAAAGCTCGTAAGAG...GTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCAAGCACTTCCGAGCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp CTGAGGGCCAGGCTGCCAGTCCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCTTGATTCACAATCATTaGGAGACCCATCCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: LRARLPVPPVGVGTGAFSLIHNH*ETHPGA
Trigger: TGCCCCAGGATGGGTCTCCAAATGATTGTGAATCAA...GGAAAAGGCACCAGTTCCCACTCCTACAGGTGGGACTGGCAGCCTGGCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS GCA 90 bp CGATGGAGGGCCTGCTGGTGGCTTACTGATGGGAGGAGGCTTACTTaGACTCTTACGAGCTTTCTTGGATACGTGGCTGGCCTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: RWRACWWLTDGRRLT*TLTSFLGYVAGLLV
Trigger: AACCAGAAGGCCAGCCACGTATCCAAGAAAGCTCGTAAGAGTGCAAGTAAGCCTCCTCCCATCAGTAAGCCACCAGCAGGCCCTCCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CCA 90 bp ATGTGGGTGGGCAGCTGTGCCATTAGACGATGGAGGGCCTGCTGGTaGCTTACTGATGGGAGGAGGCTTACTTGCACTCTTACGAGCTTT +
Preference number: 5 (lower is better)
Translates to: MWVGSCAIRRWRACW*LTDGRRLTCTLTSF
Trigger: AAAGCTCGTAAGAGTGCAAGTAAGCCTCCTCCCATCAGTAAGCCACCAGCAGGCCCTCCATCGTCTAATGGCACAGCTGCCCACCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp AGTCAGCCTGCTATCATTCCGGCTGCAGCCTTGGAGCAGGCAAGATCTCCACCCTGTACATCCTTCATTTaGAGGGGAAGGTCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: SQPAIIPAAALEQARSPPCTSFI*RGRSAS
Trigger: ACTGGCAGACCTTCCCCTCAAAATGAAGGATGTACA...GGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCAGGCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS-3UTR CAA 90 bp CTGAGGGCCAGGCTGCCAGTCCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCGGAACTTCAAATTTCTaGTGCCTTTCAGAACATGGG +
Preference number: 5 (lower is better)
Translates to: LRARLPVPPVGVGTGAFSGTSNF*CLSEHG
Trigger: CCCATGTTCTGAAAGGCACAAGAAATTTGAAGTTCC...GGAAAAGGCACCAGTTCCCACTCCTACAGGTGGGACTGGCAGCCTGGCCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp CCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGGGAGGACTTAGATGTTGTGGTTaGAGAATCTGCTGTAGTTTC +
Preference number: 5 (lower is better)
Translates to: PQAQPELSRGWDDQQQGGLRCCG*RICCSF
Trigger: GAAACTACAGCAGATTCTCAAACCACAACATCTAAG...TCCTCCCTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp GCCGACACAGGGGAGCTGCTCACTGTGGGTCTCCTTCTGAGCTGTTCTAACACTTCGAACTGTTCTGCTTaGCGGGGAAGACATAAGAGC +
Preference number: 5 (lower is better)
Translates to: ADTGELLTVGLLLSCSNTSNCSA*RGRHKS
Trigger: GCTCTTATGTCTTCCCCGCAAAGCAGAACAGTTCGA...AGTGTTAGAACAGCTCAGAAGGAGACCCACAGTGAGCAGCTCCCCTGTGTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp AGTCAGCCTGCTATCATTCCGGCTGCAGCCTTGGAGCAGGCAAGATCTCCACCCATGCCTGTTTTGATATaGGTGTCCACACTGCGAACA +
Preference number: 5 (lower is better)
Translates to: SQPAIIPAAALEQARSPPMPVLI*VSTLRT
Trigger: TGTTCGCAGTGTGGACACCAATATCAAAACAGGCAT...GGGTGGAGATCTTGCCTGCTCCAAGGCTGCAGCCGGAATGATAGCAGGCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp CCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGGGAGGAGTCAGAGGTAAAATATaGTCAACCAAACCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: PQAQPELSRGWDDQQQGGVRGKI*STKPFG
Trigger: TCCAAAAGGTTTGGTTGACAATATTTTACCTCTGAC...TCCTCCCTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp CCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTCTCTTACGAGCTTTCTaGGATACGTGGCTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PTCRSGNWCLFQASKYALLLRAF*DTWLAF
Trigger: GAAGGCCAGCCACGTATCCAAGAAAGCTCGTAAGAG...AAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACAGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp ACGACCAGCAACAGGGAGGAGCTACCCTCTCTGCTAAGAGCTTCAGAGACCTGTTGGGAGGAGGCTTACTaGCACTCTTACGAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: TTSNREELPSLLRASETCWEEAY*HSYELS
Trigger: AGAAAGCTCGTAAGAGTGCAAGTAAGCCTCCTCCCA...ACAGGTCTCTGAAGCTCTTAGCAGAGAGGGTAGCTCCTCCCTGTTGCTGGTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp GGGCAAAGCGCCACGAGCAACAGGTTTCCAGGGGAAGAAAACCACCACAAAGATAACTCCTGTTCCAGCTaGATCTCCACCCTAGTTGCA +
Preference number: 5 (lower is better)
Translates to: GQSATSNRFPGEENHHKDNSCSS*ISTLVA
Trigger: TGCAACTAGGGTGGAGATCAAGCTGGAACAGGAGTT...ATCTTTGTGGTGGTTTTCTTCCCCTGGAAACCTGTTGCTCGTGGCGCTTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp CCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTTGGGAGGAGGCTTACTaGCACTCTTACGAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: PTCRSGNWCLFQASKYALWEEAY*HSYELS
Trigger: AGAAAGCTCGTAAGAGTGCAAGTAAGCCTCCTCCCA...AAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACAGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp GCCCGTAAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCACTGGCAATATCAATaGGATATGGTAGCTCATTTA +
Preference number: 5 (lower is better)
Translates to: ARKMPQAQPELSRGWDDQHWQYQ*DMVAHL
Trigger: TAAATGAGCTACCATATCCAATTGATATTGCCAGTG...CTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTTACGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp AGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTCCTCCCCCGCCAAGTCTTCATGGTTaGCTGAAGAAATACCATTCC +
Preference number: 5 (lower is better)
Translates to: RSGNWCLFQASKYALPPPPSLHG*LKKYHS
Trigger: GGAATGGTATTTCTTCAGCAAACCATGAAGACTTGG...CGGGGGAGGAAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp AAAATGCCCCAGGCTCAGCCAGAACTGAGCAGAGGGTGGGACGACCAGCAACAGGATTTACTGTTGCAATaGTTACATGGACCAAAATGG +
Preference number: 5 (lower is better)
Translates to: KMPQAQPELSRGWDDQQQDLLLQ*LHGPKW
Trigger: CCATTTTGGTCCATGTAACAATTGCAACAGTAAATC...CTGTTGCTGGTCGTCCCACCCTCTGCTCAGTTCTGGCTGAGCCTGGGGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp TGCAGGCTCGGAAGTGCTTGCCTCTGCAGCTTGGCTTCTCCCTGCTATTGGCACAATTTCTTCATGAGTTaGACTACTGTACAGGGAAAC +
Preference number: 5 (lower is better)
Translates to: CRLGSACLCSLASPCYWHNFFMS*TTVQGN
Trigger: GTTTCCCTGTACAGTAGTCAAACTCATGAAGAAATT...GTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCAAGCACTTCCGAGCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp CGAGCAACAGGTTTCCAGGGGAAGAAAACCACCACAAAGATCACTCATAACACTGGCTTCTCCCTGCTATaGGCACCAGCTCTCAGATCA +
Preference number: 5 (lower is better)
Translates to: RATGFQGKKTTTKITHNTGFSLL*APALRS
Trigger: TGATCTGAGAGCTGGTGCCAATAGCAGGGAGAAGCC...AGTGTTATGAGTGATCTTTGTGGTGGTTTTCTTCCCCTGGAAACCTGTTGCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS TCA 90 bp GTGTCCTGTGAAAGAGTACGAGGGGCAACTGATATATCTTTAGGGTaGGTTACTGAGGCTGTTTCAGCTGAGGCAGCATCACCCACAGAA +
Preference number: 5 (lower is better)
Translates to: VSCERVRGATDISLG*VTEAVSAEAASPTE
Trigger: TTCTGTGGGTGATGCTGCCTCAGCTGAAACAGCCTCAGTAACTCACCCTAAAGATATATCAGTTGCCCCTCGTACTCTTTCACAGGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp CCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTCTTCATATGCCTGTTTaGATATTGGTGTCCACACTG +
Preference number: 5 (lower is better)
Translates to: PTCRSGNWCLFQASKYALLHMPV*ILVSTL
Trigger: CAGTGTGGACACCAATATCAAAACAGGCATATGAAG...AAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACAGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp CCCACCTGTAGGAGTGGGAACTGGTGCCTTTTCCAGGCCAGTAAGTATGCACTTGGAACTTCAAATTTCTaGTGCCTTTCAGAACATGGG +
Preference number: 5 (lower is better)
Translates to: PTCRSGNWCLFQASKYALGTSNF*CLSEHG
Trigger: CCCATGTTCTGAAAGGCACAAGAAATTTGAAGTTCC...AAGTGCATACTTACTGGCCTGGAAAAGGCACCAGTTCCCACTCCTACAGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp GCCGACACAGGGGAGCTGCTCACTGTGGGTCTCCTTCTGAGCTGTTCTAACACTATTACTGAGAGCGTGTaGGTCATTAGTCTTTTTAAG +
Preference number: 5 (lower is better)
Translates to: ADTGELLTVGLLLSCSNTITESV*VISLFK
Trigger: CTTAAAAAGACTAATGACCAACACGCTCTCAGTAAT...AGTGTTAGAACAGCTCAGAAGGAGACCCACAGTGAGCAGCTCCCCTGTGTCGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp GCCGACACAGGGGAGCTGCTCACTGTGGGTCTCCTTCTGAGCTGTTCTAACACTTGTCAACCAAACCTTTaGGACCTGAAAGTAAATGAT +
Preference number: 5 (lower is better)
Translates to: ADTGELLTVGLLLSCSNTCQPNL*DLKVND
Trigger: ATCATTTACTTTCAGGTCCAAAAGGTTTGGTTGACA...AGTGTTAGAACAGCTCAGAAGGAGACCCACAGTGAGCAGCTCCCCTGTGTCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp TGCCTCTGCAGCTTGGCTTCTCCCTGCTATTGGCACCAGCTCTCAGATCAAAGCTACTATCAGGTAAGTTaGACGAGGTTTCGTCATATA +
Preference number: 5 (lower is better)
Translates to: CLCSLASPCYWHQLSDQSYYQVS*TRFRHI
Trigger: TATATGACGAAACCTCGTCAAACTTACCTGATAGTA...GCTTTGATCTGAGAGCTGGTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS-3UTR CAA 90 bp TGCCTCTGCAGCTTGGCTTCTCCCTGCTATTGGCACCAGCTCTCAGATCAAAGCGATTTACTGTTGCAATaGTTACATGGACCAAAATGG +
Preference number: 5 (lower is better)
Translates to: CLCSLASPCYWHQLSDQSDLLLQ*LHGPKW
Trigger: CCATTTTGGTCCATGTAACAATTGCAACAGTAAATC...GCTTTGATCTGAGAGCTGGTGCCAATAGCAGGGAGAAGCCAAGCTGCAGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp ACGACCAGCAACAGGGAGGAGCTACCCTCTCTGCTAAGAGCTTCAGAGACCTGTAATTTCTTCATGAGTTaGACTACTGTACAGGGAAAC +
Preference number: 5 (lower is better)
Translates to: TTSNREELPSLLRASETCNFFMS*TTVQGN
Trigger: GTTTCCCTGTACAGTAGTCAAACTCATGAAGAAATT...ACAGGTCTCTGAAGCTCTTAGCAGAGAGGGTAGCTCCTCCCTGTTGCTGGTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS TCA 90 bp TTGCTCTCCAGTGGCATTTCCAGTTTAGATGTACATCCTTCATTTTaGGGGGAAGGTCTGCCAGTTCCAGAGACATCAACTGTAGCAGGA +
Preference number: 5 (lower is better)
Translates to: LLSSGISSLDVHPSF*GEGLPVPETSTVAG
Trigger: TCCTGCTACAGTTGATGTCTCTGGAACTGGCAGACCTTCCCCTCAAAATGAAGGATGTACATCTAAACTGGAAATGCCACTGGAGAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000465952.5
CDS-3UTR CAA 90 bp ATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTAAACCTTGCATTTGGGGGCCTGCTTTaGCAGGCTCGGAAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: MCKKDYMLHGQNQRLNLAFGGLL*QARKCL
Trigger: CAAGCACTTCCGAGCCTGCAAAAGCAGGCCCCCAAA...TGCAAGGTTTAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp AAAGTTTACATTCCACAGCACTCTACCGGTGTAACAAACAGGCGTAGGCTCTTATTGATTCACAATCATTaGGAGACCCATCCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: KVYIPQHSTGVTNRRRLLLIHNH*ETHPGA
Trigger: TGCCCCAGGATGGGTCTCCAAATGATTGTGAATCAA...TAAGAGCCTACGCCTGTTTGTTACACCGGTAGAGTGCTGTGGAATGTAAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS GCA 90 bp CTGTTGCAATTGTTACATGGACCAAAATGGGCAGCATTAAGTGGGTaGCACTCAGGGATGACATTTGTAAAGGTGACCAGACTCTTCATA +
Preference number: 5 (lower is better)
Translates to: LLQLLHGPKWAALSG*HSGMTFVKVTRLFI
Trigger: TATGAAGAGTCTGGTCACCTTTACAAATGTCATCCCTGAGTGGCACCCACTTAATGCTGCCCATTTTGGTCCATGTAACAATTGCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CCA 90 bp ATGGGAGGAGGCTTACTTGCACTCTTACGAGCTTTCTTGGATACGTaGCTGGCCTTCTGGTTTATACCTTTAGTTTTAAAGCCACCAAAA +
Preference number: 5 (lower is better)
Translates to: MGGGLLALLRAFLDT*LAFWFIPLVLKPPK
Trigger: TTTTGGTGGCTTTAAAACTAAAGGTATAAACCAGAAGGCCAGCCACGTATCCAAGAAAGCTCGTAAGAGTGCAAGTAAGCCTCCTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CCA 90 bp TTTACTGTTGCAATTGTTACATGGACCAAAATGGGCAGCATTAAGTaGGTGCCACTCAGGGATGACATTTGTAAAGGTGACCAGACTCTT +
Preference number: 5 (lower is better)
Translates to: FTVAIVTWTKMGSIK*VPLRDDICKGDQTL
Trigger: AAGAGTCTGGTCACCTTTACAAATGTCATCCCTGAGTGGCACCCACTTAATGCTGCCCATTTTGGTCCATGTAACAATTGCAACAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CCA 90 bp TACTGTACAGGGAAACACCAGGAACAGTGGTGCATGCAGACTCACTaGCAATATCAATTGGATATGGTAGCTCATTTAACAAGTCCTCTA +
Preference number: 5 (lower is better)
Translates to: YCTGKHQEQWCMQTH*QYQLDMVAHLTSPL
Trigger: TAGAGGACTTGTTAAATGAGCTACCATATCCAATTGATATTGCCAGTGAGTCTGCATGCACCACTGTTCCTGGTGTTTCCCTGTACAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CCA 90 bp TTTCTTCATGAGTTTGACTACTGTACAGGGAAACACCAGGAACAGTaGTGCATGCAGACTCACTGGCAATATCAATTGGATATGGTAGCT +
Preference number: 5 (lower is better)
Translates to: FLHEFDYCTGKHQEQ*CMQTHWQYQLDMVA
Trigger: AGCTACCATATCCAATTGATATTGCCAGTGAGTCTGCATGCACCACTGTTCCTGGTGTTTCCCTGTACAGTAGTCAAACTCATGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CCA 90 bp CAGATGTGTGTTCTGGGAAACATCATTGAATTCACTTGGTACTGGTaGTGGGATATGACTATCTCCCATTCCCAAATACCTAAAGTCACC +
Preference number: 5 (lower is better)
Translates to: QMCVLGNIIEFTWYW*WDMTISHSQIPKVT
Trigger: GGTGACTTTAGGTATTTGGGAATGGGAGATAGTCATATCCCACCACCAGTACCAAGTGAATTCAATGATGTTTCCCAGAACACACATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CCA 90 bp TCTAACGCAGGCATTATTTGTCAGAGAGTCTGGCTGAACTTCACATaGATTTTTCTTGGTGGGGCTACAATAATTATGGTCCTGTCTCAG +
Preference number: 5 (lower is better)
Translates to: SNAGIICQRVWLNFT*IFLGGATIIMVLSQ
Trigger: CTGAGACAGGACCATAATTATTGTAGCCCCACCAAGAAAAATCCATGTGAAGTTCAGCCAGACTCTCTGACAAATAATGCCTGCGTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp AGGCCACACAACCATAAGGAAAACTGTCACACATTCATATACCGTATACAACTTTCGAACTGTTCTGCTTaGCGGGGAAGACATAAGAGC +
Preference number: 5 (lower is better)
Translates to: RPHNHKENCHTFIYRIQLSNCSA*RGRHKS
Trigger: GCTCTTATGTCTTCCCCGCAAAGCAGAACAGTTCGA...AAGTTGTATACGGTATATGAATGTGTGACAGTTTTCCTTATGGTTGTGTGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS TCA 90 bp ATCTCATTCCGCTCCAAGGAATCAGCTGTCCTAATTGGATTCTGTTaGCCACTACTATCAGGTAAGTTTGACGAGGTTTCGTCATATACT +
Preference number: 5 (lower is better)
Translates to: ISFRSKESAVLIGFC*PLLSGKFDEVSSYT
Trigger: AGTATATGACGAAACCTCGTCAAACTTACCTGATAGTAGTGGTCAACAGAATCCAATTAGGACAGCTGATTCCTTGGAGCGGAATGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000465952.5
CDS TCA 90 bp TTCTGGGAAACATCATTGAATTCACTTGGTACTGGTGGTGGGATATaGCTATCTCCCATTCCCAAATACCTAAAGTCACCTTCCCCATTT +
Preference number: 5 (lower is better)
Translates to: FWETSLNSLGTGGGI*LSPIPKYLKSPSPF
Trigger: AAATGGGGAAGGTGACTTTAGGTATTTGGGAATGGGAGATAGTCATATCCCACCACCAGTACCAAGTGAATTCAATGATGTTTCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CCA 90 bp ATGTGTGTTCTGGGAAACATCATTGAATTCACTTGGTACTGGTGGTaGGATATGACTATCTCCCATTCCCAAATACCTAAAGTCACCTTC +
Preference number: 5 (lower is better)
Translates to: MCVLGNIIEFTWYWW*DMTISHSQIPKVTF
Trigger: GAAGGTGACTTTAGGTATTTGGGAATGGGAGATAGTCATATCCCACCACCAGTACCAAGTGAATTCAATGATGTTTCCCAGAACACACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CCA 90 bp TCTCAGATGTGTGTTCTGGGAAACATCATTGAATTCACTTGGTACTaGTGGTGGGATATGACTATCTCCCATTCCCAAATACCTAAAGTC +
Preference number: 5 (lower is better)
Translates to: SQMCVLGNIIEFTWY*WWDMTISHSQIPKV
Trigger: GACTTTAGGTATTTGGGAATGGGAGATAGTCATATCCCACCACCAGTACCAAGTGAATTCAATGATGTTTCCCAGAACACACATCTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS TCA 90 bp AATAATTATGGTCCTGTCTCAGATGTGTGTTCTGGGAAACATCATTaGATTCACTTGGTACTGGTGGTGGGATATGACTATCTCCCATTC +
Preference number: 5 (lower is better)
Translates to: NNYGPVSDVCSGKHH*IHLVLVVGYDYLPF
Trigger: GAATGGGAGATAGTCATATCCCACCACCAGTACCAAGTGAATTCAATGATGTTTCCCAGAACACACATCTGAGACAGGACCATAATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp AGGCCACACAACCATAAGGAAAACTGTCACACATTCATATACCGTATACAACTTGGAAATGATGTACATTaGCTCTCCAGTGGCATTTCC +
Preference number: 5 (lower is better)
Translates to: RPHNHKENCHTFIYRIQLGNDVH*LSSGIS
Trigger: GGAAATGCCACTGGAGAGCAAATGTACATCATTTCC...AAGTTGTATACGGTATATGAATGTGTGACAGTTTTCCTTATGGTTGTGTGGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS-3UTR CAA 90 bp AAAGTTTACATTCCACAGCACTCTACCGGTGTAACAAACAGGCGTAGGCTCTTAGTCAGAGGTAAAATATaGTCAACCAAACCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: KVYIPQHSTGVTNRRRLLVRGKI*STKPFG
Trigger: TCCAAAAGGTTTGGTTGACAATATTTTACCTCTGAC...TAAGAGCCTACGCCTGTTTGTTACACCGGTAGAGTGCTGTGGAATGTAAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp ATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTAAACCTTGCACTTCATATGCCTGTTTaGATATTGGTGTCCACACTG +
Preference number: 5 (lower is better)
Translates to: MCKKDYMLHGQNQRLNLALHMPV*ILVSTL
Trigger: CAGTGTGGACACCAATATCAAAACAGGCATATGAAG...TGCAAGGTTTAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp AGGCCACACAACCATAAGGAAAACTGTCACACATTCATATACCGTATACAACTTATTACTGAGAGCGTGTaGGTCATTAGTCTTTTTAAG +
Preference number: 5 (lower is better)
Translates to: RPHNHKENCHTFIYRIQLITESV*VISLFK
Trigger: CTTAAAAAGACTAATGACCAACACGCTCTCAGTAAT...AAGTTGTATACGGTATATGAATGTGTGACAGTTTTCCTTATGGTTGTGTGGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp ATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTAAACCTTGCATGTCAACCAAACCTTTaGGACCTGAAAGTAAATGAT +
Preference number: 5 (lower is better)
Translates to: MCKKDYMLHGQNQRLNLACQPNL*DLKVND
Trigger: ATCATTTACTTTCAGGTCCAAAAGGTTTGGTTGACA...TGCAAGGTTTAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp GTGATTTTAATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTACCAAGTCTTCATGGTTaGCTGAAGAAATACCATTCC +
Preference number: 5 (lower is better)
Translates to: VILMCKKDYMLHGQNQRLPSLHG*LKKYHS
Trigger: GGAATGGTATTTCTTCAGCAAACCATGAAGACTTGG...TAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACATTAAAATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp GTGATTTTAATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTATTCTTCACCCTTCATTaGTCTGCATATCTGGACACA +
Preference number: 5 (lower is better)
Translates to: VILMCKKDYMLHGQNQRLFFTLH*SAYLDT
Trigger: TGTGTCCAGATATGCAGACAAATGAAGGGTGAAGAA...TAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACATTAAAATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp GTGATTTTAATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTACATCATTCCGAGTCATaGGCTAATTTATGTCACTTG +
Preference number: 5 (lower is better)
Translates to: VILMCKKDYMLHGQNQRLHHSES*ANLCHL
Trigger: CAAGTGACATAAATTAGCCAATGACTCGGAATGATG...TAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACATTAAAATCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS-3UTR CAA 90 bp GTGATTTTAATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTACTTAGATGTTGTGGTTaGAGAATCTGCTGTAGTTTC +
Preference number: 5 (lower is better)
Translates to: VILMCKKDYMLHGQNQRLLRCCG*RICCSF
Trigger: GAAACTACAGCAGATTCTCAAACCACAACATCTAAG...TAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACATTAAAATCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS-3UTR CAA 90 bp GTGATTTTAATGTGTAAGAAAGATTACATGCTTCATGGGCAGAACCAAAGGTTACACTGGCAATATCAATaGGATATGGTAGCTCATTTA +
Preference number: 5 (lower is better)
Translates to: VILMCKKDYMLHGQNQRLHWQYQ*DMVAHL
Trigger: TAAATGAGCTACCATATCCAATTGATATTGCCAGTG...TAACCTTTGGTTCTGCCCATGAAGCATGTAATCTTTCTTACACATTAAAATCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CAA 90 bp CCCTCCGCAGAGGCGTGGCTGTCCGCCCTGTGGCCGCAGACGCAGTaGCGACTGCGGCGACGAGGAGGGGCGGGGCCGGTGGCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: PSAEAWLSALWPQTQ*RLRRRGGAGPVAAE
Trigger: CTCAGCAGCCACCGGCCCCGCCCCTCCTCGTCGCCGCAGTCGCAACTGCGTCTGCGGCCACAGGGCGGACAGCCACGCCTCTGCGGAGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465952.5
CDS GCA 72 bp AGGCGTGGCTGTCCGCCCTGTGGCCGCAGACGCAGTTaGGACTGCGGCGACGAGGAGGGGCGGGGCCGGTGG +
Preference number: 6 (lower is better)
Translates to: RRGCPPCGRRRS*DCGDEEGRGRW
Trigger: CCACCGGCCCCGCCCCTCCTCGTCGCCGCAGTCGCAACTGCGTCTGCGGCCACAGGGCGGACAGCCACGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465952.5
CDS CAA 72 bp GAGGCGTGGCTGTCCGCCCTGTGGCCGCAGACGCAGTaGCGACTGCGGCGACGAGGAGGGGCGGGGCCGGTG +
Preference number: 6 (lower is better)
Translates to: EAWLSALWPQTQ*RLRRRGGAGPV
Trigger: CACCGGCCCCGCCCCTCCTCGTCGCCGCAGTCGCAACTGCGTCTGCGGCCACAGGGCGGACAGCCACGCCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465952.5
CDS CCA 72 bp AGACGTGAGCACTTCCGGTCGCCCTCCGCAGAGGCGTaGCTGTCCGCCCTGTGGCCGCAGACGCAGTTGCGA +
Preference number: 6 (lower is better)
Translates to: RREHFRSPSAEA*LSALWPQTQLR
Trigger: TCGCAACTGCGTCTGCGGCCACAGGGCGGACAGCCACGCCTCTGCGGAGGGCGACCGGAAGTGCTCACGTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465952.5
CDS TCA 72 bp GCTGGGCCTGAAAGGACGGTGGCGTGGCGGGGAAGGTaGAGACGTGAGCACTTCCGGTCGCCCTCCGCAGAG +
Preference number: 6 (lower is better)
Translates to: AGPERTVAWRGR*RREHFRSPSAE
Trigger: CTCTGCGGAGGGCGACCGGAAGTGCTCACGTCTTCACCTTCCCCGCCACGCCACCGTCCTTTCAGGCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465952.5
CDS GCA 72 bp GGCTTGAGTCCGCGGCAAAAGAGTCCTCCTTCCTGCTaGACGCTGGGCCTGAAAGGACGGTGGCGTGGCGGG +
Preference number: 6 (lower is better)
Translates to: GLSPRQKSPPSC*TLGLKGRWRGG
Trigger: CCCGCCACGCCACCGTCCTTTCAGGCCCAGCGTGCAGCAGGAAGGAGGACTCTTTTGCCGCGGACTCAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465952.5
CDS CAA 90 bp TGCTCCTCCCCCACTCGCGTCTCCACTAGGAAGGCGGCTTCCGGCTaGAGTCCGCGGCAAAAGAGTCCTCCTTCCTGCTGCACGCTGGGC +
Preference number: 6 (lower is better)
Translates to: CSSPTRVSTRKAASG*SPRQKSPPSCCTLG
Trigger: GCCCAGCGTGCAGCAGGAAGGAGGACTCTTTTGCCGCGGACTCAAGCCGGAAGCCGCCTTCCTAGTGGAGACGCGAGTGGGGGAGGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465952.5
CDS GCA 72 bp TCCGGCTTGAGTCCGCGGCAAAAGAGTCCTCCTTCCTaGTGCACGCTGGGCCTGAAAGGACGGTGGCGTGGC +
Preference number: 6 (lower is better)
Translates to: SGLSPRQKSPPS*CTLGLKGRWRG
Trigger: GCCACGCCACCGTCCTTTCAGGCCCAGCGTGCAGCAGGAAGGAGGACTCTTTTGCCGCGGACTCAAGCCGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465952.5
CDS TCA 72 bp GGCAAAAGAGTCCTCCTTCCTGCTGCACGCTGGGCCTaGAAGGACGGTGGCGTGGCGGGGAAGGTGAAGACG +
Preference number: 6 (lower is better)
Translates to: GKRVLLPAARWA*KDGGVAGKVKT
Trigger: CGTCTTCACCTTCCCCGCCACGCCACCGTCCTTTCAGGCCCAGCGTGCAGCAGGAAGGAGGACTCTTTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465952.5
CDS CAA 72 bp CCCACTCGCGTCTCCACTAGGAAGGCGGCTTCCGGCTaGAGTCCGCGGCAAAAGAGTCCTCCTTCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: PTRVSTRKAASG*SPRQKSPPSCC
Trigger: GCAGCAGGAAGGAGGACTCTTTTGCCGCGGACTCAAGCCGGAAGCCGCCTTCCTAGTGGAGACGCGAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465952.5
CDS TCA 72 bp CCACTCGCGTCTCCACTAGGAAGGCGGCTTCCGGCTTaGGTCCGCGGCAAAAGAGTCCTCCTTCCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: PLASPLGRRLPA*VRGKRVLLPAA
Trigger: TGCAGCAGGAAGGAGGACTCTTTTGCCGCGGACTCAAGCCGGAAGCCGCCTTCCTAGTGGAGACGCGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465952.5
CDS GCA 72 bp CCTAGTTGCAACGTTCAACCCACGTTCCCCTCGGACTaGTCCTCCCCCACTCGCGTCTCCACTAGGAAGGCG +
Preference number: 6 (lower is better)
Translates to: PSCNVQPTFPSD*SSPTRVSTRKA
Trigger: CGCCTTCCTAGTGGAGACGCGAGTGGGGGAGGAGCAGTCCGAGGGGAACGTGGGTTGAACGTTGCAACTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465952.5
CDS GCA 72 bp TGGGTGGGCAGCTGTGCCATTAGACGATGGAGGGCCTaGTGGTGGCTTACTGATGGGAGGAGGCTTACTTGC +
Preference number: 6 (lower is better)
Translates to: WVGSCAIRRWRA*WWLTDGRRLTC
Trigger: GCAAGTAAGCCTCCTCCCATCAGTAAGCCACCAGCAGGCCCTCCATCGTCTAATGGCACAGCTGCCCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CAA 90 bp CACTCCCCTTCTTGGTACCGGGTCGATCGGAACTCCTGTTCCAGCTaGATCTCCACCCTAGTTGCAACGTTCAACCCACGTTCCCCTCGG +
Preference number: 6 (lower is better)
Translates to: HSPSWYRVDRNSCSS*ISTLVATFNPRSPR
Trigger: CCGAGGGGAACGTGGGTTGAACGTTGCAACTAGGGTGGAGATCAAGCTGGAACAGGAGTTCCGATCGACCCGGTACCAAGAAGGGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255304.9
ENST00000465952.5
ENST00000614860.1
CDS CCA 72 bp GTGGGCAGCTGTGCCATTAGACGATGGAGGGCCTGCTaGTGGCTTACTGATGGGAGGAGGCTTACTTGCACT +
Preference number: 6 (lower is better)
Translates to: VGSCAIRRWRAC*WLTDGRRLTCT
Trigger: AGTGCAAGTAAGCCTCCTCCCATCAGTAAGCCACCAGCAGGCCCTCCATCGTCTAATGGCACAGCTGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CCA 72 bp TTTTTCAATGAACCCTGCCGCGGGCACTCCCCTTCTTaGTACCGGGTCGATCGGAACTCCTGTTCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: FFNEPCRGHSPS*YRVDRNSCSSL
Trigger: CAAGCTGGAACAGGAGTTCCGATCGACCCGGTACCAAGAAGGGGAGTGCCCGCGGCAGGGTTCATTGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS CCA 72 bp GCTGAATCAAAATTCTGCCGCGGGCACTCCCCTTCTTaGTACCGGGTCGATCGGAACTCCTGTTCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: AESKFCRGHSPS*YRVDRNSCSSL
Trigger: CAAGCTGGAACAGGAGTTCCGATCGACCCGGTACCAAGAAGGGGAGTGCCCGCGGCAGAATTTTGATTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465952.5
ENST00000614860.1
CDS GCA 72 bp GCCTGCTGGTGGCTTACTGATGGGAGGAGGCTTACTTaGACTCTTACGAGCTTTCTTGGATACGTGGCTGGC +
Preference number: 6 (lower is better)
Translates to: ACWWLTDGRRLT*TLTSFLGYVAG
Trigger: GCCAGCCACGTATCCAAGAAAGCTCGTAAGAGTGCAAGTAAGCCTCCTCCCATCAGTAAGCCACCAGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CAA 72 bp TCTTGGTACCGGGTCGATCGGAACTCCTGTTCCAGCTaGATCTCCACCCTAGTTGCAACGTTCAACCCACGT +
Preference number: 6 (lower is better)
Translates to: SWYRVDRNSCSS*ISTLVATFNPR
Trigger: ACGTGGGTTGAACGTTGCAACTAGGGTGGAGATCAAGCTGGAACAGGAGTTCCGATCGACCCGGTACCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255304.9
ENST00000465952.5
ENST00000614860.1
CDS GCA 72 bp CACAGTCCAGTCACGGTGTTCTTTAACTCTTCCGAGTaGACCAAAGCTGACAGGATACAGTCTAACCAACAG +
Preference number: 6 (lower is better)
Translates to: HSPVTVFFNSSE*TKADRIQSNQQ
Trigger: CTGTTGGTTAGACTGTATCCTGTCAGCTTTGGTGCACTCGGAAGAGTTAAAGAACACCGTGACTGGACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000465952.5
CDS CAA 90 bp TTTGCTCTCCAGTGGCATTTCCAGTTTAGATGTACATCCTTCATTTaGAGGGGAAGGTCTGCCAGTTCCAGAGACATCAACTGTAGCAGG +
Preference number: 6 (lower is better)
Translates to: FALQWHFQFRCTSFI*RGRSASSRDINCSR
Trigger: CCTGCTACAGTTGATGTCTCTGGAACTGGCAGACCTTCCCCTCAAAATGAAGGATGTACATCTAAACTGGAAATGCCACTGGAGAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000465952.5
CDS TCA 72 bp GAAAGAGTACGAGGGGCAACTGATATATCTTTAGGGTaGGTTACTGAGGCTGTTTCAGCTGAGGCAGCATCA +
Preference number: 6 (lower is better)
Translates to: ERVRGATDISLG*VTEAVSAEAAS
Trigger: TGATGCTGCCTCAGCTGAAACAGCCTCAGTAACTCACCCTAAAGATATATCAGTTGCCCCTCGTACTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CAA 90 bp GGCTTACTGATGGGAGGAGGCTTACTTGCACTCTTACGAGCTTTCTaGGATACGTGGCTGGCCTTCTGGTTTATACCTTTAGTTTTAAAG +
Preference number: 6 (lower is better)
Translates to: GLLMGGGLLALLRAF*DTWLAFWFIPLVLK
Trigger: CTTTAAAACTAAAGGTATAAACCAGAAGGCCAGCCACGTATCCAAGAAAGCTCGTAAGAGTGCAAGTAAGCCTCCTCCCATCAGTAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS TCA 72 bp CGCTCCAAGGAATCAGCTGTCCTAATTGGATTCTGTTaGCCACTACTATCAGGTAAGTTTGACGAGGTTTCG +
Preference number: 6 (lower is better)
Translates to: RSKESAVLIGFC*PLLSGKFDEVS
Trigger: CGAAACCTCGTCAAACTTACCTGATAGTAGTGGTCAACAGAATCCAATTAGGACAGCTGATTCCTTGGAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000465952.5
CDS GCA 72 bp TTGTTACATGGACCAAAATGGGCAGCATTAAGTGGGTaGCACTCAGGGATGACATTTGTAAAGGTGACCAGA +
Preference number: 6 (lower is better)
Translates to: LLHGPKWAALSG*HSGMTFVKVTR
Trigger: TCTGGTCACCTTTACAAATGTCATCCCTGAGTGGCACCCACTTAATGCTGCCCATTTTGGTCCATGTAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CCA 72 bp GCAATTGTTACATGGACCAAAATGGGCAGCATTAAGTaGGTGCCACTCAGGGATGACATTTGTAAAGGTGAC +
Preference number: 6 (lower is better)
Translates to: AIVTWTKMGSIK*VPLRDDICKGD
Trigger: GTCACCTTTACAAATGTCATCCCTGAGTGGCACCCACTTAATGCTGCCCATTTTGGTCCATGTAACAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CCA 72 bp GAGTTTGACTACTGTACAGGGAAACACCAGGAACAGTaGTGCATGCAGACTCACTGGCAATATCAATTGGAT +
Preference number: 6 (lower is better)
Translates to: EFDYCTGKHQEQ*CMQTHWQYQLD
Trigger: ATCCAATTGATATTGCCAGTGAGTCTGCATGCACCACTGTTCCTGGTGTTTCCCTGTACAGTAGTCAAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CAA 72 bp CAGTGGCATTTCCAGTTTAGATGTACATCCTTCATTTaGAGGGGAAGGTCTGCCAGTTCCAGAGACATCAAC +
Preference number: 6 (lower is better)
Translates to: QWHFQFRCTSFI*RGRSASSRDIN
Trigger: GTTGATGTCTCTGGAACTGGCAGACCTTCCCCTCAAAATGAAGGATGTACATCTAAACTGGAAATGCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000465952.5
CDS TCA 72 bp AGTGGCATTTCCAGTTTAGATGTACATCCTTCATTTTaGGGGGAAGGTCTGCCAGTTCCAGAGACATCAACT +
Preference number: 6 (lower is better)
Translates to: SGISSLDVHPSF*GEGLPVPETST
Trigger: AGTTGATGTCTCTGGAACTGGCAGACCTTCCCCTCAAAATGAAGGATGTACATCTAAACTGGAAATGCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000465952.5
CDS TCA 72 bp GGTCCTGTCTCAGATGTGTGTTCTGGGAAACATCATTaGATTCACTTGGTACTGGTGGTGGGATATGACTAT +
Preference number: 6 (lower is better)
Translates to: GPVSDVCSGKHH*IHLVLVVGYDY
Trigger: ATAGTCATATCCCACCACCAGTACCAAGTGAATTCAATGATGTTTCCCAGAACACACATCTGAGACAGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CCA 72 bp TGTGATTTACTGTTGCAATTGTTACATGGACCAAAATaGGCAGCATTAAGTGGGTGCCACTCAGGGATGACA +
Preference number: 6 (lower is better)
Translates to: CDLLLQLLHGPK*AALSGCHSGMT
Trigger: TGTCATCCCTGAGTGGCACCCACTTAATGCTGCCCATTTTGGTCCATGTAACAATTGCAACAGTAAATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CCA 72 bp GAGAGTCTGGCTGAACTTCACATGGATTTTTCTTGGTaGGGCTACAATAATTATGGTCCTGTCTCAGATGTG +
Preference number: 6 (lower is better)
Translates to: ESLAELHMDFSW*GYNNYGPVSDV
Trigger: CACATCTGAGACAGGACCATAATTATTGTAGCCCCACCAAGAAAAATCCATGTGAAGTTCAGCCAGACTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CCA 72 bp GTTCTGGGAAACATCATTGAATTCACTTGGTACTGGTaGTGGGATATGACTATCTCCCATTCCCAAATACCT +
Preference number: 6 (lower is better)
Translates to: VLGNIIEFTWYW*WDMTISHSQIP
Trigger: AGGTATTTGGGAATGGGAGATAGTCATATCCCACCACCAGTACCAAGTGAATTCAATGATGTTTCCCAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS TCA 72 bp ACATCATTGAATTCACTTGGTACTGGTGGTGGGATATaGCTATCTCCCATTCCCAAATACCTAAAGTCACCT +
Preference number: 6 (lower is better)
Translates to: TSLNSLGTGGGI*LSPIPKYLKSP
Trigger: AGGTGACTTTAGGTATTTGGGAATGGGAGATAGTCATATCCCACCACCAGTACCAAGTGAATTCAATGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CCA 72 bp TGTGTTCTGGGAAACATCATTGAATTCACTTGGTACTaGTGGTGGGATATGACTATCTCCCATTCCCAAATA +
Preference number: 6 (lower is better)
Translates to: CVLGNIIEFTWY*WWDMTISHSQI
Trigger: TATTTGGGAATGGGAGATAGTCATATCCCACCACCAGTACCAAGTGAATTCAATGATGTTTCCCAGAACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CAA 72 bp GCTCATTTAACAAGTCCTCTATTGATTCACAATCATTaGGAGACCCATCCTGGGGCACCTGTTCTAGATTTT +
Preference number: 6 (lower is better)
Translates to: AHLTSPLLIHNH*ETHPGAPVLDF
Trigger: AAAATCTAGAACAGGTGCCCCAGGATGGGTCTCCAAATGATTGTGAATCAATAGAGGACTTGTTAAATGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CAA 90 bp GCATTTTTCCACTGGACACATAAAGCCTGGGGAAATGATGTACATTaGCTCTCCAGTGGCATTTCCAGTTTAGATGTACATCCTTCATTT +
Preference number: 6 (lower is better)
Translates to: AFFHWTHKAWGNDVH*LSSGISSLDVHPSF
Trigger: AAATGAAGGATGTACATCTAAACTGGAAATGCCACTGGAGAGCAAATGTACATCATTTCCCCAGGCTTTATGTGTCCAGTGGAAAAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000465952.5
CDS CAA 90 bp GATATGGTAGCTCATTTAACAAGTCCTCTATTGATTCACAATCATTaGGAGACCCATCCTGGGGCACCTGTTCTAGATTTTCACTTCGAA +
Preference number: 6 (lower is better)
Translates to: DMVAHLTSPLLIHNH*ETHPGAPVLDFHFE
Trigger: TTCGAAGTGAAAATCTAGAACAGGTGCCCCAGGATGGGTCTCCAAATGATTGTGAATCAATAGAGGACTTGTTAAATGAGCTACCATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CAA 90 bp TGGCAATATCAATTGGATATGGTAGCTCATTTAACAAGTCCTCTATaGATTCACAATCATTTGGAGACCCATCCTGGGGCACCTGTTCTA +
Preference number: 6 (lower is better)
Translates to: WQYQLDMVAHLTSPL*IHNHLETHPGAPVL
Trigger: TAGAACAGGTGCCCCAGGATGGGTCTCCAAATGATTGTGAATCAATAGAGGACTTGTTAAATGAGCTACCATATCCAATTGATATTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CAA 90 bp AAACACCAGGAACAGTGGTGCATGCAGACTCACTGGCAATATCAATaGGATATGGTAGCTCATTTAACAAGTCCTCTATTGATTCACAAT +
Preference number: 6 (lower is better)
Translates to: KHQEQWCMQTHWQYQ*DMVAHLTSPLLIHN
Trigger: ATTGTGAATCAATAGAGGACTTGTTAAATGAGCTACCATATCCAATTGATATTGCCAGTGAGTCTGCATGCACCACTGTTCCTGGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CCA 72 bp CTCTTACGAGCTTTCTTGGATACGTGGCTGGCCTTCTaGTTTATACCTTTAGTTTTAAAGCCACCAAAATTA +
Preference number: 6 (lower is better)
Translates to: LLRAFLDTWLAF*FIPLVLKPPKL
Trigger: TAATTTTGGTGGCTTTAAAACTAAAGGTATAAACCAGAAGGCCAGCCACGTATCCAAGAAAGCTCGTAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CAA 90 bp TGGCAAACCATTTCCAATCTTCGGAGAATCCATCATTCCGAGTCATaGGCTAATTTATGTCACTTGAGACATGTCAATATCACTAAGGAT +
Preference number: 6 (lower is better)
Translates to: WQTISNLRRIHHSES*ANLCHLRHVNITKD
Trigger: ATCCTTAGTGATATTGACATGTCTCAAGTGACATAAATTAGCCAATGACTCGGAATGATGGATTCTCCGAAGATTGGAAATGGTTTGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255304.9
CDS TCA 72 bp AATTGTTCAGTTTTTGGTGTAAGGAATTGTTTTAACTaGGCGTCCTTCTCAATTTCTACTGACTTCACTCCC +
Preference number: 6 (lower is better)
Translates to: NCSVFGVRNCFN*ASFSISTDFTP
Trigger: GGGAGTGAAGTCAGTAGAAATTGAGAAGGACGCTCAGTTAAAACAATTCCTTACACCAAAAACTGAACAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS TCA 72 bp ACTGAAGGTTGTAAATCAGTTATAGTGTTTCTATTATaGGCTGAAACACAGAGTGGCATAAAAGAAGCACCC +
Preference number: 6 (lower is better)
Translates to: TEGCKSVIVFLL*AETQSGIKEAP
Trigger: GGGTGCTTCTTTTATGCCACTCTGTGTTTCAGCTCATAATAGAAACACTATAACTGATTTACAACCTTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS GCA 72 bp ATATGTATCTCTGAAGCAGGAACTTCAAATTTCTTGTaGCTTTCAGAACATGGGCCTTTTAAGTCATCACAT +
Preference number: 6 (lower is better)
Translates to: ICISEAGTSNFL*LSEHGPFKSSH
Trigger: ATGTGATGACTTAAAAGGCCCATGTTCTGAAAGGCACAAGAAATTTGAAGTTCCTGCTTCAGAGATACATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255304.9
ENST00000614860.1
CDS CAA 72 bp ATTTCCAATCTTCGGAGAATCCATCATTCCGAGTCATaGGCTAATTTATGTCACTTGAGACATGTCAATATC +
Preference number: 6 (lower is better)
Translates to: ISNLRRIHHSES*ANLCHLRHVNI
Trigger: GATATTGACATGTCTCAAGTGACATAAATTAGCCAATGACTCGGAATGATGGATTCTCCGAAGATTGGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255304.9