RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP8 (Homo sapiens)

Ensembl gene IDs: ENSG00000138592

Ensembl transcript IDs: ENST00000307179.9, ENST00000396444.7, ENST00000419830.2, ENST00000558892.1, ENST00000559329.5, ENST00000560885.5, ENST00000561206.1, ENST00000625664.2

Found 325 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCACTGTCGCCCGGGCTAGAGTGCACTGGCACCATCTCGGCTCACTaGAACCTCCGCCGCCCAGTTTCAAGCGATTTTCCTGCTTCAGCC +
Preference number: 1 (lower is better)
Translates to: ALSPGLECTGTISAH*NLRRPVSSDFPASA
Trigger: GGCTGAAGCAGGAAAATCGCTTGAAACTGGGCGGCGGAGGTTGCAGTGAGCCGAGATGGTGCCAGTGCACTCTAGCCCGGGCGACAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR TCA 90 bp GGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCCTaGTATAGCTTTGATAACACACGAGTCAGTGAGATTCCAGATACT +
Preference number: 1 (lower is better)
Translates to: GGHYTAFCKNSVTQA*YSFDNTRVSEIPDT
Trigger: AGTATCTGGAATCTCACTGACTCGTGTGTTATCAAAGCTATATCAGGCCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR TCA 90 bp CAGTTGTACCTCAGTATCTGCAGGGAGTTGGTTCCAGGATCCCTTTaGCTATCAAAATCCACAGATGCTCAAGGGCCCTATATAAAATGG +
Preference number: 1 (lower is better)
Translates to: QLYLSICRELVPGSL*LSKSTDAQGPYIKW
Trigger: CCATTTTATATAGGGCCCTTGAGCATCTGTGGATTTTGATAGTCAAAGGGATCCTGGAACCAACTCCCTGCAGATACTGAGGTACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CCA 90 bp ACTAAGTTTGACATTCCTTTCTCCCATAGAACCATTTTGGTGATTTaGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCC +
Preference number: 1 (lower is better)
Translates to: TKFDIPFSHRTILVI*MVATTLLSARIQSP
Trigger: GGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCACCAAAATGGTTCTATGGGAGAAAGGAATGTCAAACTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR GCA 90 bp CCTGAACACTGCAAAACAAGCAGTCAGCATCTGGTGGTAGAGTTTTaGTTGGTCATTAAACTCTTAGAACTTACTTGCATCATTAACATT +
Preference number: 1 (lower is better)
Translates to: PEHCKTSSQHLVVEF*LVIKLLELTCIINI
Trigger: AATGTTAATGATGCAAGTAAGTTCTAAGAGTTTAATGACCAAGCAAAACTCTACCACCAGATGCTGACTGCTTGTTTTGCAGTGTTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR TCA 90 bp TCTCTTGGCCCTATCATTTCTGTTCCAGTAGTTAGTGTTCATATGTaGATACTAAGTTTGACATTCCTTTCTCCCATAGAACCATTTTGG +
Preference number: 1 (lower is better)
Translates to: SLGPIISVPVVSVHM*ILSLTFLSPIEPFW
Trigger: CCAAAATGGTTCTATGGGAGAAAGGAATGTCAAACTTAGTATTCACATATGAACACTAACTACTGGAACAGAAATGATAGGGCCAAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR TCA 90 bp TGTGGCATATATTTCAGTAGGCTTTTCAGTGAGGGTCTGTTATCCTaGAGTCTCTCAGTCTTTGAGAAGTCTTTAATTCACTTTCATTCT +
Preference number: 1 (lower is better)
Translates to: CGIYFSRLFSEGLLS*SLSVFEKSLIHFHS
Trigger: AGAATGAAAGTGAATTAAAGACTTCTCAAAGACTGAGAGACTTCAGGATAACAGACCCTCACTGAAAAGCCTACTGAAATATATGCCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGTGCTGGGATTACATaGGCCACCGCGCCCGGCCGC +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSAGIT*ATAPGR
Trigger: GCGGCCGGGCGCGGTGGCTCATGTAATCCCAGCACT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCTCCTGTTCTATAGCTaGCAGCCCTTTTCCATACCA +
Preference number: 2 (lower is better)
Translates to: VIWMVATTLLSARIQSPRLLFYS*QPFSIP
Trigger: TGGTATGGAAAAGGGCTGGCAGCTATAGAACAGGAG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 90 bp ACGGGCCGTGGTTTGCTGACCCTTATCATACACCATAACACCTCCTaGGAAGTACACCTCTCTAATGCCTTTGTTCCAAACAATACTGGG +
Preference number: 2 (lower is better)
Translates to: TGRGLLTLIIHHNTS*EVHLSNAFVPNNTG
Trigger: CCCAGTATTGTTTGGAACAAAGGCATTAGAGAGGTGTACTTCCAAGGAGGTGTTATGGTGTATGATAAGGGTCAGCAAACCACGGCCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 90 bp CTTTACGCCCAGGCAGTCACAAAGCATAAACCACACACCATACTGTaGTTAAATTTCCTGTTTAGGGCTCCGCCCAGGCTGGAATGCAAT +
Preference number: 2 (lower is better)
Translates to: LYAQAVTKHKPHTIL*LNFLFRAPPRLECN
Trigger: ATTGCATTCCAGCCTGGGCGGAGCCCTAAACAGGAAATTTAACAACAGTATGGTGTGTGGTTTATGCTTTGTGACTGCCTGGGCGTAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCTTTGCAATCATGCCTaGCTCCCGGCATTTTTACTT +
Preference number: 2 (lower is better)
Translates to: VIWMVATTLLSARIQSPRLCNHA*LPAFLL
Trigger: AAGTAAAAATGCCGGGAGTCAGGCATGATTGCAAAG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTGCAATGCTAATGGATaGAGGCCTTCAAAACACTGC +
Preference number: 2 (lower is better)
Translates to: VIWMVATTLLSARIQSPRCNANG*RPSKHC
Trigger: GCAGTGTTTTGAAGGCCTGCATCCATTAGCATTGCA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGCTCGCTTCCTGCTGTaGAGCCAGGTCCTGAACAGG +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTARFLL*SQVLNR
Trigger: CCTGTTCAGGACCTGGCTGCACAGCAGGAAGCGAGC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATTTGGGAGGCCGAAGTaGGAGGATCCCGAGGTCGAG +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTFGRPK*EDPEVE
Trigger: CTCGACCTCGGGATCCTCCCACTTCGGCCTCCCAAA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATTGGTCTTGAACTCCTaGCCTCATGGTCCACCCGCC +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLVLNS*PHGPPA
Trigger: GGCGGGTGGACCATGAGGTCAGGAGTTCAAGACCAA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGTGGTCTGGAACTCCTaGTCTCAGGTGATCCGCCTG +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTVVWNS*SQVIRL
Trigger: CAGGCGGATCACCTGAGATCAGGAGTTCCAGACCAC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGTGTTTCCTGAACACTaGAAAACAAGCAGTCAGCAT +
Preference number: 2 (lower is better)
Translates to: VIWMVATTLLSARIQSPRVFPEH*KTSSQH
Trigger: ATGCTGACTGCTTGTTTTGCAGTGTTCAGGAAACAC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACCTCCTGCCTCTGCCTaGCAAGTAGCTGGGACTACA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTPPASA*QVAGTT
Trigger: TGTAGTCCCAGCTACTTGGCAGGCAGAGGCAGGAGG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATCGCCCAGGCTGGAGTaGAATGGCACGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSPRLE*NGTISA
Trigger: AGCTGAGATCGTGCCATTGCACTCCAGCCTGGGCGA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGCCTCCCAAGTAGCTaGGATTACCGGCATGCGCCA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSLPSS*DYRHAP
Trigger: TGGCGCATGCCGGTAATCCCAGCTACTTGGGAGGCT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAACAGTGGCGCGATCTTaGCTCACTGCAAGCTCCGAC +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTTVARS*LTASSD
Trigger: GTCGGAGCTTGCAGTGAGCCAAGATCGCGCCACTGT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATGCCCAGGCTGGTCTTaGACTCCTGGACTCAAGCAA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTCPGWS*TPGLKQ
Trigger: TTGCTTGAGTCCAGGAGTTCAAGACCAGCCTGGGCA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGGCAGAAGAATTGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTGRRIA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCAATTCTTCTGCC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGAGGTTGTGGTGAGCTaGGATCACGTCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTEVVVS*DHVTAL
Trigger: GAGTGCAGTGACGTGATCTCAGCTCACCACAACCTC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATTTGGGGGCCTGAAGTaGGAGGACTGCTTGTGCCTA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTFGGLK*EDCLCL
Trigger: TAGGCACAAGCAGTCCTCTCACTTCAGGCCCCCAAA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACTCAAGCAATCCACCTaGCTCAGCCTCCCAGAGTGT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLKQST*LSLPEC
Trigger: ACACTCTGGGAGGCTGAGGCAGGTGGATTGCTTGAG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACTGAGATCACGTCACTaGACTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTGACGTGATCTCAG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACCGCCCAGGCTGGAATaGAATGGCATGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTPPRLE*NGMISA
Trigger: AGCTGAGATCATGCCATTGCATTCCAGCCTGGGCGG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATTCATGCCATTCTCCTaGCTCAGCCTCCGGAGTAGC +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTFMPFS*LSLRSS
Trigger: GCTACTCCGGAGGCTGAGGCAGGAGAATGGCATGAA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAACGATCTCGGCTCACTaGAAGCTTCACCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTTISAH*KLHLLG
Trigger: ACCCAGGAGGTGAAGCTTGCAGTGAGCCGAGATCGT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACTGGTCTACAACTCCTaGGCTCAAGCAGTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLVYNS*AQAVCP
Trigger: TGGGCAGACTGCTTGAGCCCAGGAGTTGTAGACCAG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACGGGTTTTGCCATGTTaGCCAGGGTGGTCTGGAACT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTRVLPC*PGWSGT
Trigger: AGTTCCAGACCACCCTGGCCAACATGGCAAAACCCG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGCCTCCTCAGTAGCTaGGATTACAGGCAGCCGACA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSLLSS*DYRQPT
Trigger: TGTCGGCTGCCTGTAATCCCAGCTACTGAGGAGGCT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 90 bp ACAGTTGTACCTCAGTATCTGCAGGGAGTTGGTTCCAGGATCCCTTaGACTATCAAAATCCACAGATGCTCAAGGGCCCTATATAAAATG +
Preference number: 2 (lower is better)
Translates to: TVVPQYLQGVGSRIP*TIKIHRCSRALYKM
Trigger: CATTTTATATAGGGCCCTTGAGCATCTGTGGATTTTGATAGTCAAAGGGATCCTGGAACCAACTCCCTGCAGATACTGAGGTACAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGATGGTGGTCTCTTTCTaGAGCACTTTTAGAATCTTA +
Preference number: 2 (lower is better)
Translates to: VIWMVATTLLSARIQSPRMVVSF*STFRIL
Trigger: TAAGATTCTAAAAGTGCTTCAGAAAGAGACCACCAT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGCTATTTGGGGGCCTaGAGTGAGAGGACTGCTTGT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSYLGA*SERTAC
Trigger: ACAAGCAGTCCTCTCACTTCAGGCCCCCAAATAGCT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGTACCAGGTTGGTCTTaGACTCCTGACCTCATGGTC +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTVPGWS*TPDLMV
Trigger: GACCATGAGGTCAGGAGTTCAAGACCAACCTGGTAC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCTGGTGGTAGAGTTTTaGTTGGTCATTAAACTCTTA +
Preference number: 2 (lower is better)
Translates to: VIWMVATTLLSARIQSPRLVVEF*LVIKLL
Trigger: TAAGAGTTTAATGACCAAGCAAAACTCTACCACCAG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACTCAAACGATCCTCCTaGCTTGGCCTTCCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLKRSS*LGLPKC
Trigger: GCACTTTGGAAGGCCAAGGCAGGAGGATCGTTTGAG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACTGGGACTACAGGCATaGTACTGTGCATGGCCAACT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLGLQA*YCAWPT
Trigger: AGTTGGCCATGCACAGTAGCATGCCTGTAGTCCCAG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCTGTTCAAAATGCTATaGATCTCCTGTTCTATAGCT +
Preference number: 2 (lower is better)
Translates to: VIWMVATTLLSARIQSPRLFKML*ISCSIA
Trigger: AGCTATAGAACAGGAGATCCATAGCATTTTGAACAG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGCCTCTCAAGTAGCTaGGATTACAGGTGCACGCCA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSLSSS*DYRCTP
Trigger: TGGCGTGCACCTGTAATCCCAGCTACTTGAGAGGCT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGTTACTTGGGAGGCTaGGGCAGGAGAAGAGCTTTA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSYLGG*GRRRAL
Trigger: TAAAGCTCTTCTCCTGCCTCAGCCTCCCAAGTAACT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAGGCCTTCAAAACACTaGAATTATATAGTGAGTTCA +
Preference number: 2 (lower is better)
Translates to: VIWMVATTLLSARIQSPRRPSKH*NYIVSS
Trigger: TGAACTCACTATATAATTGCAGTGTTTTGAAGGCCT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGGGATTACTGGCATGTaGCACCAGACCCAGCTAATT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTGITGM*HQTQLI
Trigger: AATTAGCTGGGTCTGGTGGCACATGCCAGTAATCCC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAATAGAGACGGGGTTTTaGCATGTTGCCCAAGCTGGT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTIETGF*HVAQAG
Trigger: ACCAGCTTGGGCAACATGGCAAAACCCCGTCTCTAT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGTCTCCCAGCTACTTaGAAGGCTGAGGCAGAAGAA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSLPAT*KAEAEE
Trigger: TTCTTCTGCCTCAGCCTTCCAAGTAGCTGGGAGACT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAACCTACCAAGTAGCTaGGACTATAGGCACGTGCCA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTNLPSS*DYRHVP
Trigger: TGGCACGTGCCTATAGTCCCAGCTACTTGGTAGGTT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGTAGTTGGGATTACTaGCATGTGCCACCAGACCCA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSSWDY*HVPPDP
Trigger: TGGGTCTGGTGGCACATGCCAGTAATCCCAACTACT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACTCCTGTTCTATAGCTaGCAGCCCTTTTCCATACCA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLLFYS*QPFSIP
Trigger: TGGTATGGAAAAGGGCTGGCAGCTATAGAACAGGAG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGGATTGAGGGGTTGTTaGTACATAGCCCCCTCAATT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTGLRGC*YIAPSI
Trigger: AATTGAGGGGGCTATGTAGCAACAACCCCTCAATCC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATTCAAGCGATTCTCCTaGTTCAGCCTCTCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTFKRFS*FSLSSS
Trigger: GCTACTTGAGAGGCTGAAGCAGGAGAATCGCTTGAA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATTCAAGCAACTCTCCTaGCTCAGCTTCCCAAGTAGT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTFKQLS*LSFPSS
Trigger: ACTACTTGGGAAGCTGAGGCAGGAGAGTTGCTTGAA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGGGGTTTTGCCATGTTaGCCAAGCTGGTTTCAAACT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTGVLPC*PSWFQT
Trigger: AGTTTGAAACCAGCTTGGGCAACATGGCAAAACCCC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAATCCCCCAAAAACGTTaGGATTACACGTGTGAGCCA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTIPQKR*DYTCEP
Trigger: TGGCTCACACGTGTAATCCCAACGTTTTTGGGGGAT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGCTTCCCAAGTAGTTaGGATTACTGGCATGTGCCA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSFPSS*DYWHVP
Trigger: TGGCACATGCCAGTAATCCCAACTACTTGGGAAGCT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATCAGTCACCCAGGCCTaGTATAGCTTTGATAACACA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSVTQA*YSFDNT
Trigger: TGTGTTATCAAAGCTATATCAGGCCTGGGTGACTGA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGCTCACTACAGTTTTaGACTCTGGGCTTAAGGGAT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSSLQF*TLGLRD
Trigger: ATCCCTTAAGCCCAGAGTTCAAAACTGTAGTGAGCT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATGCAATGCTAATGGATaGAGGCCTTCAAAACACTGC +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTCNANG*RPSKHC
Trigger: GCAGTGTTTTGAAGGCCTGCATCCATTAGCATTGCA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACGGCATGCGCCACCATaGCCAGCTAATTTTTATATT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTRHAPP*PANFYI
Trigger: AATATAAAAATTAGCTGGGCATGGTGGCGCATGCCG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAACCATTTTGGTGATTTaGATGGTGGCCACTACACTG +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTTILVI*MVATTL
Trigger: CAGTGTAGTGGCCACCATCCAAATCACCAAAATGGT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGAAAATGGTGTTTCCTaGACACTGCAAAACAAGCAG +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTENGVS*TLQNKQ
Trigger: CTGCTTGTTTTGCAGTGTTCAGGAAACACCATTTTC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATTATTCTCTGTACCATaGGTCCAAGCTAACACAAGC +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLFSVP*VQANTS
Trigger: GCTTGTGTTAGCTTGGACTCATGGTACAGAGAATAA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACTACTGTATTGTCTCTaGTTTCTATGGCTGCTATGG +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLLYCL*FLWLLW
Trigger: CCATAGCAGCCATAGAAATCAGAGACAATACAGTAG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATTCACTTTGCAATCATaGCTGACTCCCGGCATTTTT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTFTLQS*LTPGIF
Trigger: AAAAATGCCGGGAGTCAGGCATGATTGCAAAGTGAA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGTGTTTCCTGAACACTaGAAAACAAGCAGTCAGCAT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTVFPEH*KTSSQH
Trigger: ATGCTGACTGCTTGTTTTGCAGTGTTCAGGAAACAC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGCCCCCTCAATTTGTaGTGTAGCAATATGCAGTTA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSPLNL*CSNMQL
Trigger: TAACTGCATATTGCTACAGCACAAATTGAGGGGGCT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 90 bp TATGTGAATACTAAGTTTGACATTCCTTTCTCCCATAGAACCATTTaGGTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATT +
Preference number: 2 (lower is better)
Translates to: YVNTKFDIPFSHRTI*VIWMVATTLLSARI
Trigger: AATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCACCAAAATGGTTCTATGGGAGAAAGGAATGTCAAACTTAGTATTCACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 90 bp ATAATTTCGCTAAGGTCACAATGTACTATTACACCCGAATTCACGTaGGAATTAACTAGTCAGATCCATTTTCATTCTGGACATGGTGGT +
Preference number: 2 (lower is better)
Translates to: IISLRSQCTITPEFT*ELTSQIHFHSGHGG
Trigger: ACCACCATGTCCAGAATGAAAATGGATCTGACTAGTTAATTCCAACGTGAATTCGGGTGTAATAGTACATTGTGACCTTAGCGAAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAATGGTGGTCTCTTTCTaGAGCACTTTTAGAATCTTA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTMVVSF*STFRIL
Trigger: TAAGATTCTAAAAGTGCTTCAGAAAGAGACCACCAT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAACAAATTCCCAGGAATaGCTTTTATTCTCTGTACCA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTTNSQE*LLFSVP
Trigger: TGGTACAGAGAATAAAAGTCATTCCTGGGAATTTGT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATGTAATTCTGATCACTaGACTACTGTTTTCAGCATC +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTCNSDH*TTVFSI
Trigger: GATGCTGAAAACAGTAGTTCAGTGATCAGAATTACA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACTGGTGGTAGAGTTTTaGTTGGTCATTAAACTCTTA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLVVEF*LVIKLL
Trigger: TAAGAGTTTAATGACCAAGCAAAACTCTACCACCAG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATTTGCATGTAACCTATaGACATCCTCCCATATACTT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTFACNL*TSSHIL
Trigger: AAGTATATGGGAGGATGTGCATAGGTTACATGCAAA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAATCAAAATCCACAGATaGTCAAGGGCCCTATATAAA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTIKIHR*SRALYK
Trigger: TTTATATAGGGCCCTTGAGCATCTGTGGATTTTGAT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAACGTGCCACTATGCCTaGTCAATTTTTGTATTTTGT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTTCHYA*SIFVFC
Trigger: ACAAAATACAAAAATTGACCAGGCATAGTGGCACGT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 90 bp TCCAGATTGACAGTTATTTTTCTCTATTATTTTGAAGCTACTGTATaGTCTCTGATTTCTATGGCTGCTATGGAGAACTTCTACCAGCAG +
Preference number: 2 (lower is better)
Translates to: SRLTVIFLYYFEATV*SLISMAAMENFYQQ
Trigger: CTGCTGGTAGAAGTTCTCCATAGCAGCCATAGAAATCAGAGACAATACAGTAGCTTCAAAATAATAGAGAAAAATAACTGTCAATCTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGGCCTTCAAAACACTaGAATTATATAGTGAGTTCA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTRPSKH*NYIVSS
Trigger: TGAACTCACTATATAATTGCAGTGTTTTGAAGGCCT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATACTTCTGTTCAAAATaGTATGGATCTCCTGTTCTA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTYFCSK*YGSPVL
Trigger: TAGAACAGGAGATCCATAGCATTTTGAACAGAAGTA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAAGATCTTTATACTCTaGTCCCAAAGAAATGGAAAG +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTKIFIL*SQRNGK
Trigger: CTTTCCATTTCTTTGGGAGCAGAGTATAAAGATCTT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACATTTTTATGCCTTGTaGGCATGTTATACAACCTTT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTHFYAL*ACYTTF
Trigger: AAAGGTTGTATAACATGCCCACAAGGCATAAAAATG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAACAGATGATAGTCAATaGGCACAACATATAAGTAGT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTTDDSQ*AQHISS
Trigger: ACTACTTATATGTTGTGCCCATTGACTATCATCTGT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAATTTTTATTTATCCCTaGCTCGCTGCATTTCCTAAA +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTIFIYP*LAAFPK
Trigger: TTTAGGAAATGCAGCGAGCCAGGGATAAATAAAAAT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACAGGTTAGATTCTTGTaGGTAAACTCTCTTTTTCTT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTQVRFL*VNSLFL
Trigger: AAGAAAAAGAGAGTTTACCCACAAGAATCTAACCTG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATTGTTTTCTGCTTTATaGGTTATTCCTCTTACAGTG +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLFSAL*VIPLTV
Trigger: CACTGTAAGAGGAATAACCCATAAAGCAGAAAACAA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTaGTTCACATTTGGGCTAATTCCGTACTGTATTAATTATAGCTAT +
Preference number: 2 (lower is better)
Translates to: HIMLVFLCCVCLLVN*FTFGLIPYCINYSY
Trigger: ATAGCTATAATTAATACAGTACGGAATTAGCCCAAATGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR GCA 72 bp GGTGCTCAGGGTAGGTTTGCCGCTCGCTTCCTGCTGTaGAGCCAGGTCCTGAACAGGTCAGGGACAGGCAGC +
Preference number: 3 (lower is better)
Translates to: GAQGRFAARFLL*SQVLNRSGTGS
Trigger: GCTGCCTGTCCCTGACCTGTTCAGGACCTGGCTGCACAGCAGGAAGCGAGCGGCAAACCTACCCTGAGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR TCA 72 bp CTCCCGGGTTCAAGTCATTCTCCTGTCTCAGCCTCCTaGGTAGCTTGGGACTACAGGCGCCCGCCACCATGC +
Preference number: 3 (lower is better)
Translates to: LPGSSHSPVSAS*VAWDYRRPPPC
Trigger: GCATGGTGGCGGGCGCCTGTAGTCCCAAGCTACTCAGGAGGCTGAGACAGGAGAATGACTTGAACCCGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR GCA 72 bp CCCGGGCTAGAGTGCACTGGCACCATCTCGGCTCACTaGAACCTCCGCCGCCCAGTTTCAAGCGATTTTCCT +
Preference number: 3 (lower is better)
Translates to: PGLECTGTISAH*NLRRPVSSDFP
Trigger: AGGAAAATCGCTTGAAACTGGGCGGCGGAGGTTGCAGTGAGCCGAGATGGTGCCAGTGCACTCTAGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR GCA 72 bp CCCAGGCTGGTCTACAACTCCTGGGCTCAAGCAGTCTaGCCACCTCCATCCCCCAAAAACGTTGGGATTACA +
Preference number: 3 (lower is better)
Translates to: PRLVYNSWAQAV*PPPSPKNVGIT
Trigger: TGTAATCCCAACGTTTTTGGGGGATGGAGGTGGGCAGACTGCTTGAGCCCAGGAGTTGTAGACCAGCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR TCA 72 bp TTGTGCTGCTGTGAGAATCTAATGCAGCAGCTGATCTaGCAGGAGGCGGTGCTCAGGGTAGGTTTGCCGCTC +
Preference number: 3 (lower is better)
Translates to: LCCCENLMQQLI*QEAVLRVGLPL
Trigger: GAGCGGCAAACCTACCCTGAGCACCGCCTCCTGTCAGATCAGCTGCTGCATTAGATTCTCACAGCAGCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR GCA 72 bp ACAGAATGTTACCAGCACCCTAACTGTGCTTGTACCTaGCTTCGAGTCTGGAAAACCACTGACTTCTGGCAG +
Preference number: 3 (lower is better)
Translates to: TECYQHPNCACT*LRVWKTTDFWQ
Trigger: CTGCCAGAAGTCAGTGGTTTTCCAGACTCGAAGGCAGGTACAAGCACAGTTAGGGTGCTGGTAACATTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR TCA 72 bp CTCAGTATCTGCAGGGAGTTGGTTCCAGGATCCCTTTaGCTATCAAAATCCACAGATGCTCAAGGGCCCTAT +
Preference number: 3 (lower is better)
Translates to: LSICRELVPGSL*LSKSTDAQGPY
Trigger: ATAGGGCCCTTGAGCATCTGTGGATTTTGATAGTCAAAGGGATCCTGGAACCAACTCCCTGCAGATACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACGGCAGTCCCCAACCTaGTTGGCACCAGGGACTGAT +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTRQSPT*LAPGTD
Trigger: ATCAGTCCCTGGTGCCAACAAGGTTGGGGACTGCCG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACCGGGTTTTGCCATGTaGGCCAGGGTGGTCTGGAAC +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTPGFAM*ARVVWN
Trigger: GTTCCAGACCACCCTGGCCAACATGGCAAAACCCGG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTGTCAGCTTCACAATTaGAACCCCATCCTTTCATCT +
Preference number: 3 (lower is better)
Translates to: VIWMVATTLLSARIQSPRCQLHN*NPILSS
Trigger: AGATGAAAGGATGGGGTTCAAATTGTGAAGCTGACA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAAAAACAGCCTGGAGTaGACCCACGGGCCGTGGTTT +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTKNSLE*THGPWF
Trigger: AAACCACGGCCCGTGGGTCAACTCCAGGCTGTTTTT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGGGGCGGGCATGGTTTaGGGATTAAACTGTTCCACC +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTGAGMV*GLNCST
Trigger: GGTGGAACAGTTTAATCCCAAAACCATGCCCGCCCC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCTTGTTAAATGTTATTaGTCAGCACTGACCGGAATT +
Preference number: 3 (lower is better)
Translates to: VIWMVATTLLSARIQSPRLVKCY*SALTGI
Trigger: AATTCCGGTCAGTGCTGACAAATAACATTTAACAAG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGTGGTAGAGTTTTGCTaGGTCATTAAACTCTTAGAA +
Preference number: 3 (lower is better)
Translates to: VIWMVATTLLSARIQSPRVVEFC*VIKLLE
Trigger: TTCTAAGAGTTTAATGACCAAGCAAAACTCTACCAC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACGGGGTTTTGCCATGTaGCCCAAGCTGGTTTCAAAC +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTRGFAM*PKLVSN
Trigger: GTTTGAAACCAGCTTGGGCAACATGGCAAAACCCCG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGTACCCTATGGGGGATaGAGGGGTTGTTGCTACATA +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTVPYGG*RGCCYI
Trigger: TATGTAGCAACAACCCCTCAATCCCCCATAGGGTAC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR TCA 72 bp AGTTTGACATTCCTTTCTCCCATAGAACCATTTTGGTaGTTTGGATGGTGGCCACTACACTGCTTTCTGCAA +
Preference number: 3 (lower is better)
Translates to: SLTFLSPIEPFW*FGWWPLHCFLQ
Trigger: TTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCACCAAAATGGTTCTATGGGAGAAAGGAATGTCAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CCA 72 bp GACATTCCTTTCTCCCATAGAACCATTTTGGTGATTTaGATGGTGGCCACTACACTGCTTTCTGCAAGAATT +
Preference number: 3 (lower is better)
Translates to: DIPFSHRTILVI*MVATTLLSARI
Trigger: AATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCACCAAAATGGTTCTATGGGAGAAAGGAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACATAGCCCCCTCAATTaGTGCTGTAGCAATATGCAG +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTHSPLN*CCSNMQ
Trigger: CTGCATATTGCTACAGCACAAATTGAGGGGGCTATG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR GCA 72 bp TTCATACCCCCACCAGCAATGACTGGAAGTTTCAGTTaGCTTAAATCCTTGTTAACACTTGGTAGTCTTTTG +
Preference number: 3 (lower is better)
Translates to: FIPPPAMTGSFS*LKSLLTLGSLL
Trigger: CAAAAGACTACCAAGTGTTAACAAGGATTTAAGGCAACTGAAACTTCCAGTCATTGCTGGTGGGGGTATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAACCATTTTGGTGATTaGGATGGTGGCCACTACACT +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTNHFGD*DGGHYT
Trigger: AGTGTAGTGGCCACCATCCAAATCACCAAAATGGTT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATGTCAGCTTCACAATTaGAACCCCATCCTTTCATCT +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTCQLHN*NPILSS
Trigger: AGATGAAAGGATGGGGTTCAAATTGTGAAGCTGACA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAACACCCGAATTCACGTaGGAATTAACTAGTCAGATC +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTTPEFT*ELTSQI
Trigger: GATCTGACTAGTTAATTCCAACGTGAATTCGGGTGT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACATATTGGGTTATATTaGCCCGGATCTTCATCAGTC +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTHIGLY*PGSSSV
Trigger: GACTGATGAAGATCCGGGCAAATATAACCCAATATG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATCTACCTACGACAAGTaGAGCATCCCTAATCTGAAA +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSTYDK*SIPNLK
Trigger: TTTCAGATTAGGGATGCTCAACTTGTCGTAGGTAGA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATACTTCAGCTTTCTCTaGGTCATATCTACCTACGAC +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTYFSFL*VISTYD
Trigger: GTCGTAGGTAGATATGACCAAGAGAAAGCTGAAGTA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR GCA 72 bp TGCAAAACAAGCAGTCAGCATCTGGTGGTAGAGTTTTaGTTGGTCATTAAACTCTTAGAACTTACTTGCATC +
Preference number: 3 (lower is better)
Translates to: CKTSSQHLVVEF*LVIKLLELTCI
Trigger: GATGCAAGTAAGTTCTAAGAGTTTAATGACCAAGCAAAACTCTACCACCAGATGCTGACTGCTTGTTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR GCA 72 bp TTCAGAAATACGCATATGTCTGGCTTTAGTACATACTaGTCAGTAGCTTTCCAAAGCGACTGTACCAATTCA +
Preference number: 3 (lower is better)
Translates to: FRNTHMSGFSTY*SVAFQSDCTNS
Trigger: TGAATTGGTACAGTCGCTTTGGAAAGCTACTGAGCAGTATGTACTAAAGCCAGACATATGCGTATTTCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATGGGGAAGACGAAGGTaGAAGGGAATATTGAATAAA +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTWGRRR*KGILNK
Trigger: TTTATTCAATATTCCCTTCAACCTTCGTCTTCCCCA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACCACACACCATACTGTaGTTAAATTTCCTGTTTAGG +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTPHTIL*LNFLFR
Trigger: CCTAAACAGGAAATTTAACAACAGTATGGTGTGTGG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGGACGGCCAACTATGTaGTATTTCTCATTTCTGAAA +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTGRPTM*YFSFLK
Trigger: TTTCAGAAATGAGAAATACAACATAGTTGGCCGTCC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACATCTAAGGTCTCAGTaGGCTGGCATAAAGTTTTTA +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTHLRSQ*AGIKFL
Trigger: TAAAAACTTTATGCCAGCCAACTGAGACCTTAGATG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR TCA 72 bp TTTGAATCCCAAACTGGTGAAAAGGTAGGTCTATGGTaGCAAATTCCCAGGAATGACTTTTATTCTCTGTAC +
Preference number: 3 (lower is better)
Translates to: FESQTGEKVGLW*QIPRNDFYSLY
Trigger: GTACAGAGAATAAAAGTCATTCCTGGGAATTTGTCACCATAGACCTACCTTTTCACCAGTTTGGGATTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR TCA 72 bp TATTTCAGTAGGCTTTTCAGTGAGGGTCTGTTATCCTaGAGTCTCTCAGTCTTTGAGAAGTCTTTAATTCAC +
Preference number: 3 (lower is better)
Translates to: YFSRLFSEGLLS*SLSVFEKSLIH
Trigger: GTGAATTAAAGACTTCTCAAAGACTGAGAGACTTCAGGATAACAGACCCTCACTGAAAAGCCTACTGAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGTGGTAGAGTTTTGCTaGGTCATTAAACTCTTAGAA +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTVVEFC*VIKLLE
Trigger: TTCTAAGAGTTTAATGACCAAGCAAAACTCTACCAC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAATAAGCCATATGGTATaGGCTGCAACTATTCAGTTT +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTISHMV*AATIQF
Trigger: AAACTGAATAGTTGCAGCCAATACCATATGGCTTAT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATTAAGCTTTTTCTCTTaGTCTCTGTTGTTCTGCAGT +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLSFFS*SLLFCS
Trigger: ACTGCAGAACAACAGAGACAAAGAGAAAAAGCTTAA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACAAACATATACAAAATaGGACAGCATAACAAACCGC +
Preference number: 3 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTQTYTK*DSITNR
Trigger: GCGGTTTGTTATGCTGTCCAATTTTGTATATGTTTG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR TCA 72 bp GATTCTCTCCTCCTAGAACTTCTACAGGACATACGCTaGATATTCTCATTCAATTTTTCATGCCTCTTAACA +
Preference number: 3 (lower is better)
Translates to: DSLLLELLQDIR*IFSFNFSCLLT
Trigger: TGTTAAGAGGCATGAAAAATTGAATGAGAATATTCAGCGTATGTCCTGTAGAAGTTCTAGGAGGAGAGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR GCA 72 bp TGCAACAATCTAGAAATTCTGTTTCCTTCTGGCAACTaGCCTAGAAATACTTTTCATATTAAGTTCACAGGA +
Preference number: 3 (lower is better)
Translates to: CNNLEILFPSGN*PRNTFHIKFTG
Trigger: TCCTGTGAACTTAATATGAAAAGTATTTCTAGGGCAGTTGCCAGAAGGAAACAGAATTTCTAGATTGTTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR TCA 72 bp CCTATCATTTCTGTTCCAGTAGTTAGTGTTCATATGTaGATACTAAGTTTGACATTCCTTTCTCCCATAGAA +
Preference number: 3 (lower is better)
Translates to: PIISVPVVSVHM*ILSLTFLSPIE
Trigger: TTCTATGGGAGAAAGGAATGTCAAACTTAGTATTCACATATGAACACTAACTACTGGAACAGAAATGATAGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR GCA 72 bp AAAGTAGGTATGAACTGGTATGTCATGGTTTTGAGTTaGATTTTCCTAATGACTAATGATGTTGAGCATCTT +
Preference number: 3 (lower is better)
Translates to: KVGMNWYVMVLS*IFLMTNDVEHL
Trigger: AAGATGCTCAACATCATTAGTCATTAGGAAAATGCAACTCAAAACCATGACATACCAGTTCATACCTACTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CCA 72 bp AAAGGAGACATTATCATGGTTTTCTACTGTTCATATTaGGTTATATTTGCCCGGATCTTCATCAGTCTTTTT +
Preference number: 3 (lower is better)
Translates to: KGDIIMVFYCSY*VIFARIFISLF
Trigger: AAAAAGACTGATGAAGATCCGGGCAAATATAACCCAATATGAACAGTAGAAAACCATGATAATGTCTCCTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAGTGCTGGGATTACATaGGCCACCGCGCCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRSAGIT*ATAPGR
Trigger: GCGGCCGGGCGCGGTGGCTCATGTAATCCCAGCACT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTCGCCCAGGCTGGAGTaGGGTGGTGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRSPRLE*GGVISA
Trigger: AGCCGAGATCACACCACCGCACTCCAGCCTGGGCGA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTGTGCAGCCAGGTCCTaGACAGGTCAGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRCAARS*TGQGQA
Trigger: TGCCTGTCCCTGACCTGTTCAGGACCTGGCTGCACA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGCTCGCTTCCTGCTGTaGAGCCAGGTCCTGAACAGG +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRARFLL*SQVLNR
Trigger: CCTGTTCAGGACCTGGCTGCACAGCAGGAAGCGAGC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCAGGCTGGAGCACAGTaGCGCGATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRQAGAQ*RDLGSL
Trigger: CAGTGAGCCAAGATCGCGCCACTGTGCTCCAGCCTG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGACTCCTGACCTCAAGTaGCGCACCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRTPDLK*RTHLGL
Trigger: GAGGCCAAGGTGGGTGCGCCACTTGAGGTCAGGAGT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGTGGTCTGGAACTCCTaGTCTCAGGTGATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRVVWNS*SQVIRL
Trigger: CAGGCGGATCACCTGAGATCAGGAGTTCCAGACCAC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCTGGTCTTGAACTCCTaGCCTCAAGTGGCGCACCCA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRLVLNS*PQVAHP
Trigger: TGGGTGCGCCACTTGAGGTCAGGAGTTCAAGACCAG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCCGAGATCGTGCCACTaGATTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRPRSCH*IPAWAT
Trigger: TGTTGCCCAGGCTGGAATGCAGTGGCACGATCTCGG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCCTCCTGCCTCTGCCTaGCAAGTAGCTGGGACTACA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRPPASA*QVAGTT
Trigger: TGTAGTCCCAGCTACTTGGCAGGCAGAGGCAGGAGG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGTGATCTCGGCTCACTaGAACCTCCACCCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRVISAH*NLHPLV
Trigger: AACCAGGGGGTGGAGGTTGCAGTGAGCCGAGATCAC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAGCCTCCCAAGTAGCTaGGATTACCGGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRSLPSS*DYRHAP
Trigger: TGGCGCATGCCGGTAATCCCAGCTACTTGGGAGGCT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCAGGCTGGAGAGCAGTaGCTCAGTCACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRQAGEQ*LSHSSL
Trigger: CAGTGAGCTGTGACTGAGCCACTGCTCTCCAGCCTG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGACAGTGGCGCGATCTTaGCTCACTGCAAGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRTVARS*LTASSD
Trigger: GTCGGAGCTTGCAGTGAGCCAAGATCGCGCCACTGT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTTTGGGGGCCTGAAGTaGGAGGACTGCTTGTGCCTA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRFGGLK*EDCLCL
Trigger: TAGGCACAAGCAGTCCTCTCACTTCAGGCCCCCAAA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCTGGTCTGGAACTCCTaGCCTCAAGTGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRLVWNS*PQVICP
Trigger: TGGGCAGATCACTTGAGGTCAGGAGTTCCAGACCAG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCTCAAGCAATCCACCTaGCTCAGCCTCCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRLKQST*LSLPEC
Trigger: ACACTCTGGGAGGCTGAGGCAGGTGGATTGCTTGAG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCTGAGATCACGTCACTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRLRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTGACGTGATCTCAG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCCGCCCAGGCTGGAATaGAATGGCATGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRPPRLE*NGMISA
Trigger: AGCTGAGATCATGCCATTGCATTCCAGCCTGGGCGG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGACGATCTCGGCTCACTaGAAGCTTCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRTISAH*KLHLLG
Trigger: ACCCAGGAGGTGAAGCTTGCAGTGAGCCGAGATCGT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCTGGTCTACAACTCCTaGGCTCAAGCAGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRLVYNS*AQAVCP
Trigger: TGGGCAGACTGCTTGAGCCCAGGAGTTGTAGACCAG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCCATGTTGGCCAGGGTaGTCTGGAACTCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRPCWPG*SGTPDL
Trigger: GAGATCAGGAGTTCCAGACCACCCTGGCCAACATGG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCGGGTTTTGCCATGTTaGCCAGGGTGGTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRRVLPC*PGWSGT
Trigger: AGTTCCAGACCACCCTGGCCAACATGGCAAAACCCG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAGCCTCCTCAGTAGCTaGGATTACAGGCAGCCGACA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRSLLSS*DYRQPT
Trigger: TGTCGGCTGCCTGTAATCCCAGCTACTGAGGAGGCT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGGGGTAACCAGCAGCTaGTGGAAGGAAAGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRGVTSS*WKERRS
Trigger: TGAACGCCTTTCCTTCCACCAGCTGCTGGTTACCCC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000396444.7
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAGCTATTTGGGGGCCTaGAGTGAGAGGACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRSYLGA*SERTAC
Trigger: ACAAGCAGTCCTCTCACTTCAGGCCCCCAAATAGCT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGTACCAGGTTGGTCTTaGACTCCTGACCTCATGGTC +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRVPGWS*TPDLMV
Trigger: GACCATGAGGTCAGGAGTTCAAGACCAACCTGGTAC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCTTGTCTCGAACTCATaGCCTCAGGTGATCCACCTC +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRLVSNS*PQVIHL
Trigger: GAGGTGGATCACCTGAGGTCATGAGTTCGAGACAAG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTCACCCACACTGGAGTaGAATGGCACGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRSPTLE*NGTILA
Trigger: AGCCAAGATCGTGCCATTGCACTCCAGTGTGGGTGA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCTCAAACGATCCTCCTaGCTTGGCCTTCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRLKRSS*LGLPKC
Trigger: GCACTTTGGAAGGCCAAGGCAGGAGGATCGTTTGAG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCTGGGACTACAGGCATaGTACTGTGCATGGCCAACT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRLGLQA*YCAWPT
Trigger: AGTTGGCCATGCACAGTAGCATGCCTGTAGTCCCAG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAGCCTCTCAAGTAGCTaGGATTACAGGTGCACGCCA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRSLSSS*DYRCTP
Trigger: TGGCGTGCACCTGTAATCCCAGCTACTTGAGAGGCT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTGCCTGCCAAGTAGCTaGGACTACAGGCATGCTACT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRCLPSS*DYRHAT
Trigger: AGTAGCATGCCTGTAGTCCCAGCTACTTGGCAGGCA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGTAACCAGCAGCTGGTaGAAGGAAAGGCGTTCATCG +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRVTSSW*KERRSS
Trigger: CGATGAACGCCTTTCCTTCCACCAGCTGCTGGTTAC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396444.7
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAGTTACTTGGGAGGCTaGGGCAGGAGAAGAGCTTTA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRSYLGG*GRRRAL
Trigger: TAAAGCTCTTCTCCTGCCTCAGCCTCCCAAGTAACT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGATCTACTTCTATAGATaGAGGTGGCGTCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRIYFYR*RWRLGS
Trigger: GCTGCCCAGACGCCACCTGCATCTATAGAAGTAGAT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGGGACTATAGGCACGTaGCACTATGCCTGGTCAATT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRGTIGT*HYAWSI
Trigger: AATTGACCAGGCATAGTGGCACGTGCCTATAGTCCC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGGGATTACTGGCATGTaGCACCAGACCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRGITGM*HQTQLI
Trigger: AATTAGCTGGGTCTGGTGGCACATGCCAGTAATCCC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAGTCTCCCAGCTACTTaGAAGGCTGAGGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRSLPAT*KAEAEE
Trigger: TTCTTCTGCCTCAGCCTTCCAAGTAGCTGGGAGACT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAACCTACCAAGTAGCTaGGACTATAGGCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRNLPSS*DYRHVP
Trigger: TGGCACGTGCCTATAGTCCCAGCTACTTGGTAGGTT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGTGGTTTCACCATGTTaGCCAGACTGGTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRVVSPC*PDWSGT
Trigger: AGTTCCAGACCAGTCTGGCCAACATGGTGAAACCAC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 72 bp TTGCTAATGCATGGGTCTTACAAAAACAGCCTGGAGTaGACCCACGGGCCGTGGTTTGCTGACCCTTATCAT +
Preference number: 4 (lower is better)
Translates to: LLMHGSYKNSLE*THGPWFADPYH
Trigger: ATGATAAGGGTCAGCAAACCACGGCCCGTGGGTCAACTCCAGGCTGTTTTTGTAAGACCCATGCATTAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 72 bp CCTCAGTATCTGCAGGGAGTTGGTTCCAGGATCCCTTaGACTATCAAAATCCACAGATGCTCAAGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: PQYLQGVGSRIP*TIKIHRCSRAL
Trigger: TAGGGCCCTTGAGCATCTGTGGATTTTGATAGTCAAAGGGATCCTGGAACCAACTCCCTGCAGATACTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGGATTGAGGGGTTGTTaGTACATAGCCCCCTCAATT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRGLRGC*YIAPSI
Trigger: AATTGAGGGGGCTATGTAGCAACAACCCCTCAATCC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTTCAAGCGATTCTCCTaGTTCAGCCTCTCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRFKRFS*FSLSSS
Trigger: GCTACTTGAGAGGCTGAAGCAGGAGAATCGCTTGAA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTTCAAGCGATTTTCCTaGTTCAGCCTCCTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRFKRFS*FSLLSS
Trigger: GCTACTGAGGAGGCTGAAGCAGGAAAATCGCTTGAA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACTCGGCTCCCCCAGGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLGSPR*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACCTGGGGGAGCCGAG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATCGCCCAGGCTGGAGTaGGGTGGTGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSPRLE*GGVISA
Trigger: AGCCGAGATCACACCACCGCACTCCAGCCTGGGCGA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGATCCCCCAAAAACGTTaGGATTACACGTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRIPQKR*DYTCEP
Trigger: TGGCTCACACGTGTAATCCCAACGTTTTTGGGGGAT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGCAACCTCCACCCCCTaGTTTCAAATGATTCTCATG +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRATSTP*FQMILM
Trigger: CATGAGAATCATTTGAAACCAGGGGGTGGAGGTTGC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAAGTGCTTCTTTCCGTaGCGCCGGGCGCGCTTCACT +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTKCFFP*RRARFT
Trigger: AGTGAAGCGCGCCCGGCGTCACGGAAAGAAGCACTT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307179.9
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTCAGTCACCCAGGCCTaGTATAGCTTTGATAACACA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRSVTQA*YSFDNT
Trigger: TGTGTTATCAAAGCTATATCAGGCCTGGGTGACTGA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAAGGTAGGTCTATGGTaGCAAATTCCCAGGAATGAC +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRKVGLW*QIPRND
Trigger: GTCATTCCTGGGAATTTGTCACCATAGACCTACCTT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAGCTCACTACAGTTTTaGACTCTGGGCTTAAGGGAT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRSSLQF*TLGLRD
Trigger: ATCCCTTAAGCCCAGAGTTCAAAACTGTAGTGAGCT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATGTGCAGCCAGGTCCTaGACAGGTCAGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTCAARS*TGQGQA
Trigger: TGCCTGTCCCTGACCTGTTCAGGACCTGGCTGCACA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATGGAGTGCGGTGGTGTaGTCTCGGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTWSAVV*SRLTAT
Trigger: GGTTGCAGTGAGCCGAGATCACACCACCGCACTCCA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTGGTGGCCACTACACTaGTTTCTGCAAGAATTCAGT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRWWPLH*FLQEFS
Trigger: ACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCGGCATGCGCCACCATaGCCAGCTAATTTTTATATT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRRHAPP*PANFYI
Trigger: AATATAAAAATTAGCTGGGCATGGTGGCGCATGCCG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGATGCTGGTTTTCCTATaGTGTGTGTGTCTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRMLVFL*CVCLLV
Trigger: GACCAACAGACACACACAGCATAGGAAAACCAGCAT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGACAATATCTCACTCTTaGTCAGGCTGGAGTGCAATG +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRTISHS*SGWSAM
Trigger: CATTGCACTCCAGCCTGAGCAAGAGTGAGATATTGT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTTTGGCCCTTCTGGTTaGCCATATAGTAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRFGPSG*PYSRMA
Trigger: TGCCATTCTACTATATGGGCAACCAGAAGGGCCAAA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGACCATTTTGGTGATTTaGATGGTGGCCACTACACTG +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRTILVI*MVATTL
Trigger: CAGTGTAGTGGCCACCATCCAAATCACCAAAATGGT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCCAGTGATGGACATTTaGCTTGTTTCCACTTTTGGC +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRPVMDI*LVSTFG
Trigger: GCCAAAAGTGGAAACAAGCCAAATGTCCATCACTGG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAACTCCTGACCTCAAGTaGCGCACCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTTPDLK*RTHLGL
Trigger: GAGGCCAAGGTGGGTGCGCCACTTGAGGTCAGGAGT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCAGAAGCAATTCTTGTaGATCTTGCTGACTGTATCC +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRQKQFL*ILLTVS
Trigger: GGATACAGTCAGCAAGATTCACAAGAATTGCTTCTG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGAAAATGGTGTTTCCTaGACACTGCAAAACAAGCAG +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRENGVS*TLQNKQ
Trigger: CTGCTTGTTTTGCAGTGTTCAGGAAACACCATTTTC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTTATTCTCTGTACCATaGGTCCAAGCTAACACAAGC +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRLFSVP*VQANTS
Trigger: GCTTGTGTTAGCTTGGACTCATGGTACAGAGAATAA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCTACTGTATTGTCTCTaGTTTCTATGGCTGCTATGG +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRLLYCL*FLWLLW
Trigger: CCATAGCAGCCATAGAAATCAGAGACAATACAGTAG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCCAAGTTACTATTTTTaGGAGAGGGTCTCACTCTGT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRPSYYF*ERVSLC
Trigger: ACAGAGTGAGACCCTCTCTCAAAAATAGTAACTTGG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTTCACTTTGCAATCATaGCTGACTCCCGGCATTTTT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRFTLQS*LTPGIF
Trigger: AAAAATGCCGGGAGTCAGGCATGATTGCAAAGTGAA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAGCCCCCTCAATTTGTaGTGTAGCAATATGCAGTTA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRSPLNL*CSNMQL
Trigger: TAACTGCATATTGCTACAGCACAAATTGAGGGGGCT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACCGAGATCGTGCCACTaGATTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTPRSCH*IPAWAT
Trigger: TGTTGCCCAGGCTGGAATGCAGTGGCACGATCTCGG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATGGGCTCAAGCAGTCTaGCCACCTCCATCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTWAQAV*PPPSPK
Trigger: TTTGGGGGATGGAGGTGGGCAGACTGCTTGAGCCCA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGACATTCACAGAGTTGTaGAGTTATCACCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRTFTEL*SYHHSP
Trigger: TGGACTGTGGTGATAACTGCACAACTCTGTGAATGT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAAAACCCGAGCATACTaGTTACAGAAACTAGGGACT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRKTRAY*LQKLGT
Trigger: AGTCCCTAGTTTCTGTAACCAGTATGCTCGGGTTTT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACAGGCTGGAGAGCAGTaGCTCAGTCACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTQAGEQ*LSHSSL
Trigger: CAGTGAGCTGTGACTGAGCCACTGCTCTCCAGCCTG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGCTTGTTTCCACTTTTaGCTGTCATCAGTAATGCTG +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRACFHF*LSSVML
Trigger: CAGCATTACTGATGACAGCCAAAAGTGGAAACAAGC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACTGGTCTGGAACTCCTaGCCTCAAGTGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLVWNS*PQVICP
Trigger: TGGGCAGATCACTTGAGGTCAGGAGTTCCAGACCAG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACCCCCTGGTTTCAAATaGTTCTCATGCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTPPGFK*FSCPSL
Trigger: GAGGCTGGGGCATGAGAATCATTTGAAACCAGGGGG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGACTTCAGCTTTCTCTTaGTCATATCTACCTACGACA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRTSAFS*SYLPTT
Trigger: TGTCGTAGGTAGATATGACCAAGAGAAAGCTGAAGT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCTTTTTCCTATTCTGTaGCCTGCCTTTTTCTTATGG +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRLFPIL*PAFFLW
Trigger: CCATAAGAAAAAGGCAGGCCACAGAATAGGAAAAAG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGACAAATTCCCAGGAATaGCTTTTATTCTCTGTACCA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRTNSQE*LLFSVP
Trigger: TGGTACAGAGAATAAAAGTCATTCCTGGGAATTTGT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTGTAATTCTGATCACTaGACTACTGTTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRCNSDH*TTVFSI
Trigger: GATGCTGAAAACAGTAGTTCAGTGATCAGAATTACA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTTTGCATGTAACCTATaGACATCCTCCCATATACTT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRFACNL*TSSHIL
Trigger: AAGTATATGGGAGGATGTGCATAGGTTACATGCAAA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGATCAAAATCCACAGATaGTCAAGGGCCCTATATAAA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRIKIHR*SRALYK
Trigger: TTTATATAGGGCCCTTGAGCATCTGTGGATTTTGAT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATTGGGTCAAGAAACTTaGCCCAGCCTGAAGGCAGTC +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLGQET*PSLKAV
Trigger: GACTGCCTTCAGGCTGGGCCAAGTTTCTTGACCCAA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGACGTGCCACTATGCCTaGTCAATTTTTGTATTTTGT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRTCHYA*SIFVFC
Trigger: ACAAAATACAAAAATTGACCAGGCATAGTGGCACGT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGCCTTCCAAAGTGCTaGGATTACATGAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSLPKC*DYMSHR
Trigger: GCGGTGGCTCATGTAATCCCAGCACTTTGGAAGGCT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAATTGTTTTCCAAAGTaGCAGCAGCATTTTACGTTC +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRNCFPK*QQHFTF
Trigger: GAACGTAAAATGCTGCTGCCACTTTGGAAAACAATT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 72 bp GGGATTGAGGGGTTGTTGCTACATAGCCCCCTCAATTaGTGCTGTAGCAATATGCAGTTAAGATCCTTATTC +
Preference number: 4 (lower is better)
Translates to: GIEGLLLHSPLN*CCSNMQLRSLF
Trigger: GAATAAGGATCTTAACTGCATATTGCTACAGCACAAATTGAGGGGGCTATGTAGCAACAACCCCTCAATCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 72 bp GGTTTGCTGACCCTTATCATACACCATAACACCTCCTaGGAAGTACACCTCTCTAATGCCTTTGTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: GLLTLIIHHNTS*EVHLSNAFVPN
Trigger: GTTTGGAACAAAGGCATTAGAGAGGTGTACTTCCAAGGAGGTGTTATGGTGTATGATAAGGGTCAGCAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAATCTACTTCTATAGATaGAGGTGGCGTCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTIYFYR*RWRLGS
Trigger: GCTGCCCAGACGCCACCTGCATCTATAGAAGTAGAT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTACTTCTGTTCAAAATaGTATGGATCTCCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRYFCSK*YGSPVL
Trigger: TAGAACAGGAGATCCATAGCATTTTGAACAGAAGTA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAAGATCTTTATACTCTaGTCCCAAAGAAATGGAAAG +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRKIFIL*SQRNGK
Trigger: CTTTCCATTTCTTTGGGAGCAGAGTATAAAGATCTT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTCCTGCATATATATGTaGATAAGAGTTTCTCTCATG +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRSCIYM*IRVSLM
Trigger: CATGAGAGAAACTCTTATGCACATATATATGCAGGA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGACTGGAAGTTTCAGTTaGCTTAAATCCTTGTTAACA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRTGSFS*LKSLLT
Trigger: TGTTAACAAGGATTTAAGGCAACTGAAACTTCCAGT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAGTACGATCAATCTGTaGAACATTCTTTATACTAGG +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRSTINL*NILYTR
Trigger: CCTAGTATAAAGAATGTTCCACAGATTGATCGTACT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCTTCTACAGATTTCTTaGCATCAGAAGTTTCATGTT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRLLQIS*HQKFHV
Trigger: AACATGAAACTTCTGATGCCAAGAAATCTGTAGAAG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGATTTTTATTTATCCCTaGCTCGCTGCATTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRIFIYP*LAAFPK
Trigger: TTTAGGAAATGCAGCGAGCCAGGGATAAATAAAAAT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAACATTGGTGTACATTaGTGTACATTTCAGCTAGAT +
Preference number: 4 (lower is better)
Translates to: VIWMVATTLLSARIQSPRNIGVH*CTFQLD
Trigger: ATCTAGCTGAAATGTACACCAATGTACACCAATGTT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGTCTGGAAAACCACTaGCTTCTGGCAGGACAGATT +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSLENH*LLAGQI
Trigger: AATCTGTCCTGCCAGAAGTCAGTGGTTTTCCAGACT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATACCTCGAGTGTCCTTaGGTGACCTTTAAAACCCGA +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTYLECP*VTFKTR
Trigger: TCGGGTTTTAAAGGTCACGCAAGGACACTCGAGGTA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATTCAAGCGATTTTCCTaGTTCAGCCTCCTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTFKRFS*FSLLSS
Trigger: GCTACTGAGGAGGCTGAAGCAGGAAAATCGCTTGAA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAACTGTGCTTGTACCTaGCTTCGAGTCTGGAAAACC +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTNCACT*LRVWKT
Trigger: GGTTTTCCAGACTCGAAGGCAGGTACAAGCACAGTT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGCAACCTCCACCCCCTaGTTTCAAATGATTCTCATG +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTATSTP*FQMILM
Trigger: CATGAGAATCATTTGAAACCAGGGGGTGGAGGTTGC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAAGGTAGGTCTATGGTaGCAAATTCCCAGGAATGAC +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTKVGLW*QIPRND
Trigger: GTCATTCCTGGGAATTTGTCACCATAGACCTACCTT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATGGTGGCCACTACACTaGTTTCTGCAAGAATTCAGT +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTWWPLH*FLQEFS
Trigger: ACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAATGCTGGTTTTCCTATaGTGTGTGTGTCTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTMLVFL*CVCLLV
Trigger: GACCAACAGACACACACAGCATAGGAAAACCAGCAT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATTTGGCCCTTCTGGTTaGCCATATAGTAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTFGPSG*PYSRMA
Trigger: TGCCATTCTACTATATGGGCAACCAGAAGGGCCAAA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACAGAAGCAATTCTTGTaGATCTTGCTGACTGTATCC +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTQKQFL*ILLTVS
Trigger: GGATACAGTCAGCAAGATTCACAAGAATTGCTTCTG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGTGCACTAGTGCAATaGATCATAGCTCACTACAGT +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSALVQ*IIAHYS
Trigger: ACTGTAGTGAGCTATGATTCATTGCACTAGTGCACT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACCAAGTTACTATTTTTaGGAGAGGGTCTCACTCTGT +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTPSYYF*ERVSLC
Trigger: ACAGAGTGAGACCCTCTCTCAAAAATAGTAACTTGG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGGTGTGCACCACCATaGCCCAATAATTTTTGTGTA +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTRCAPP*PNNFCV
Trigger: TACACAAAAATTATTGGGGCATGGTGGTGCACACCT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAACATTCACAGAGTTGTaGAGTTATCACCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTTFTEL*SYHHSP
Trigger: TGGACTGTGGTGATAACTGCACAACTCTGTGAATGT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATCCTGGCTTTGTATGTaGATCTCAATCCAACTTCTC +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSWLCM*ISIQLL
Trigger: GAGAAGTTGGATTGAGATCCACATACAAAGCCAGGA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACTGCTCCCAAAGAAATaGAAAGCTCTTAGAACACTG +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLLPKK*KALRTL
Trigger: CAGTGTTCTAAGAGCTTTCCATTTCTTTGGGAGCAG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATTGTTCGTTTTGTTTTaGCCCTTCTGGTTGCCCATA +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLFVLF*PFWLPI
Trigger: TATGGGCAACCAGAAGGGCCAAAACAAAACGAACAA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 72 bp CTGGCCAGTTCAGTAGTTTTTAGTACATTCACAGAGTaGTGCAGTTATCACCACAGTCCAGTTTTAGAACAT +
Preference number: 4 (lower is better)
Translates to: LASSVVFSTFTE*CSYHHSPVLEH
Trigger: ATGTTCTAAAACTGGACTGTGGTGATAACTGCACAACTCTGTGAATGTACTAAAAACTACTGAACTGGCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 72 bp AGTTGCCTTAAATCCTTGTTAACACTTGGTAGTCTTTaGTTCGTTTTGTTTTGGCCCTTCTGGTTGCCCATA +
Preference number: 4 (lower is better)
Translates to: SCLKSLLTLGSL*FVLFWPFWLPI
Trigger: TATGGGCAACCAGAAGGGCCAAAACAAAACGAACAAAAGACTACCAAGTGTTAACAAGGATTTAAGGCAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR TCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAACAGTGTTGGTGGGTaGATGATAATAACGAAAGGT +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTNSVGG*MIITKG
Trigger: ACCTTTCGTTATTATCATTCACCCACCAACACTGTT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATCCTATTCTGTGGCCTaGCTTTTTCTTATGGAATTG +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSYSVA*LFLMEL
Trigger: CAATTCCATAAGAAAAAGGCAGGCCACAGAATAGGA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAACTTCAGCTTTCTCTTaGTCATATCTACCTACGACA +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTTSAFS*SYLPTT
Trigger: TGTCGTAGGTAGATATGACCAAGAGAAAGCTGAAGT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACTTTTTCCTATTCTGTaGCCTGCCTTTTTCTTATGG +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLFPIL*PAFFLW
Trigger: CCATAAGAAAAAGGCAGGCCACAGAATAGGAAAAAG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACTGTTCAAAATGCTATaGATCTCCTGTTCTATAGCT +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLFKML*ISCSIA
Trigger: AGCTATAGAACAGGAGATCCATAGCATTTTGAACAG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATTCTACTGTTCATATTaGGTTATATTTGCCCGGATC +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTFYCSY*VIFARI
Trigger: GATCCGGGCAAATATAACCCAATATGAACAGTAGAA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 72 bp AAAACAAGCAGTCAGCATCTGGTGGTAGAGTTTTGCTaGGTCATTAAACTCTTAGAACTTACTTGCATCATT +
Preference number: 4 (lower is better)
Translates to: KTSSQHLVVEFC*VIKLLELTCII
Trigger: AATGATGCAAGTAAGTTCTAAGAGTTTAATGACCAAGCAAAACTCTACCACCAGATGCTGACTGCTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 72 bp CTAAGGTCACAATGTACTATTACACCCGAATTCACGTaGGAATTAACTAGTCAGATCCATTTTCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: LRSQCTITPEFT*ELTSQIHFHSG
Trigger: TCCAGAATGAAAATGGATCTGACTAGTTAATTCCAACGTGAATTCGGGTGTAATAGTACATTGTGACCTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 72 bp CTCTTCAGTCATTTTGGTAACTTATTCTCCAGATATTaGTCTATTTCATCTAAGGTCTCAGTTGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: LFSHFGNLFSRY*SISSKVSVGWH
Trigger: ATGCCAGCCAACTGAGACCTTAGATGAAATAGACAAATATCTGGAGAATAAGTTACCAAAATGACTGAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 72 bp AAATTTCTGGGTCATATGGTAACTCTGGTTAATTTTTaGAGGAACTGCCAAATTGTTTTCCAAAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: KFLGHMVTLVNF*RNCQIVFQSGS
Trigger: GCTGCCACTTTGGAAAACAATTTGGCAGTTCCTCAAAAAATTAACCAGAGTTACCATATGACCCAGAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 72 bp CCAGCAATGACTGGAAGTTTCAGTTGCCTTAAATCCTaGTTAACACTTGGTAGTCTTTTGTTCGTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: PAMTGSFSCLKS*LTLGSLLFVLF
Trigger: AAACAAAACGAACAAAAGACTACCAAGTGTTAACAAGGATTTAAGGCAACTGAAACTTCCAGTCATTGCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAATTCTCAGACATCAGTaGATCCCATGTTTTGATATA +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTILRHQ*IPCFDI
Trigger: TATATCAAAACATGGGATGCACTGATGTCTGAGAAT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR GCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATCCTGCATATATATGTaGATAAGAGTTTCTCTCATG +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSCIYM*IRVSLM
Trigger: CATGAGAGAAACTCTTATGCACATATATATGCAGGA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGTACGATCAATCTGTaGAACATTCTTTATACTAGG +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSTINL*NILYTR
Trigger: CCTAGTATAAAGAATGTTCCACAGATTGATCGTACT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACTTCTACAGATTTCTTaGCATCAGAAGTTTCATGTT +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLLQIS*HQKFHV
Trigger: AACATGAAACTTCTGATGCCAAGAAATCTGTAGAAG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAACATTGGTGTACATTaGTGTACATTTCAGCTAGAT +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTNIGVH*CTFQLD
Trigger: ATCTAGCTGAAATGTACACCAATGTACACCAATGTT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CCA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGCCCATATAGTAGAATaGCATTGTGGTTTAAATAAC +
Preference number: 4 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTAHIVE*HCGLNN
Trigger: GTTATTTAAACCACAATGCCATTCTACTATATGGGC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 72 bp CAAAGGAGACATTATCATGGTTTTCTACTGTTCATATaGGGTTATATTTGCCCGGATCTTCATCAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: QRRHYHGFLLFI*GYICPDLHQSF
Trigger: AAAAGACTGATGAAGATCCGGGCAAATATAACCCAATATGAACAGTAGAAAACCATGATAATGTCTCCTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
3UTR CAA 72 bp TTGGGTTATATTTGCCCGGATCTTCATCAGTCTTTTTaGTTAATCACTGTCTATTATGTATCACTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LGYICPDLHQSF*LITVYYVSLLP
Trigger: AGGAAGAAGTGATACATAATAGACAGTGATTAACAAAAAAGACTGATGAAGATCCGGGCAAATATAACCCAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS CCA 90 bp TCCTCTCCGCGGACAGAGCTTGTCTCCGGGGTAACCAGCAGCTGGTaGAAGGAAAGGCGTTCATCGTTCACAGCGGACGACTTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: SSPRTELVSGVTSSW*KERRSSFTADDFPE
Trigger: CTCTGGGAAGTCGTCCGCTGTGAACGATGAACGCCTTTCCTTCCACCAGCTGCTGGTTACCCCGGAGACAAGCTCTGTCCGCGGAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396444.7
ENST00000558892.1
ENST00000559329.5
ENST00000560885.5
ENST00000625664.2
CDS CCA 90 bp CACTCCTCTCCGCGGACAGAGCTTGTCTCCGGGGTAACCAGCAGCTaGTGGAAGGAAAGGCGTTCATCGTTCACAGCGGACGACTTCCCA +
Preference number: 5 (lower is better)
Translates to: HSSPRTELVSGVTSS*WKERRSSFTADDFP
Trigger: TGGGAAGTCGTCCGCTGTGAACGATGAACGCCTTTCCTTCCACCAGCTGCTGGTTACCCCGGAGACAAGCTCTGTCCGCGGAGAGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396444.7
ENST00000558892.1
ENST00000559329.5
ENST00000560885.5
ENST00000625664.2
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAGTGGCGCACCCACCTaGGCCTCCCAAAGTGCTCGG +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRSGAPT*ASQSAR
Trigger: CCGAGCACTTTGGGAGGCCAAGGTGGGTGCGCCACT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCGGCAGTCCCCAACCTaGTTGGCACCAGGGACTGAT +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRRQSPT*LAPGTD
Trigger: ATCAGTCCCTGGTGCCAACAAGGTTGGGGACTGCCG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCCGGGTTTTGCCATGTaGGCCAGGGTGGTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRPGFAM*ARVVWN
Trigger: GTTCCAGACCACCCTGGCCAACATGGCAAAACCCGG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCACAGTGGCGCGATCTaGGCTCACTGCAAGCTCCGA +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRHSGAI*AHCKLR
Trigger: TCGGAGCTTGCAGTGAGCCAAGATCGCGCCACTGTG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAAAAACAGCCTGGAGTaGACCCACGGGCCGTGGTTT +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRKNSLE*THGPWF
Trigger: AAACCACGGCCCGTGGGTCAACTCCAGGCTGTTTTT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGGGATTGAGGGGTTGTaGCTACATAGCCCCCTCAAT +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRGIEGL*LHSPLN
Trigger: ATTGAGGGGGCTATGTAGCAACAACCCCTCAATCCC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGTACCCTATGGGGGATaGAGGGGTTGTTGCTACATA +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRVPYGG*RGCCYI
Trigger: TATGTAGCAACAACCCCTCAATCCCCCATAGGGTAC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGGGACCTCTGCTGTGTaGTTTTCCCCTGTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRGTSAV*FSPVVL
Trigger: AAGAACAACAGGGGAAAACAACACAGCAGAGGTCCC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGTGGCGCACCCACCTaGGCCTCCCAAAGTGCTCGG +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSGAPT*ASQSAR
Trigger: CCGAGCACTTTGGGAGGCCAAGGTGGGTGCGCCACT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS GCA 90 bp TCTGAATCTGACTTGCTTACATCCCTTCAGCTTCCTTCTTTTGGCTaGAAGCCCTGCATGGTCTCCTCATCATCAACAGGCTCCAGTTCA +
Preference number: 5 (lower is better)
Translates to: SESDLLTSLQLPSFG*KPCMVSSSSTGSSS
Trigger: TGAACTGGAGCCTGTTGATGATGAGGAGACCATGCAGGGCTTGCAGCCAAAAGAAGGAAGCTGAAGGGATGTAAGCAAGTCAGATTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419830.2
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCATAGCCCCCTCAATTaGTGCTGTAGCAATATGCAG +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRHSPLN*CCSNMQ
Trigger: CTGCATATTGCTACAGCACAAATTGAGGGGGCTATG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGACAATATCTCACTCTaGCTCAGGCTGGAGTGCAAT +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRDNISL*LRLECN
Trigger: ATTGCACTCCAGCCTGAGCAAGAGTGAGATATTGTC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAGGCCTGATATAGCTTaGATAACACACGAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRRPDIA*ITHESV
Trigger: CACTGACTCGTGTGTTATCAAAGCTATATCAGGCCT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAACCATTTTGGTGATTaGGATGGTGGCCACTACACT +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRNHFGD*DGGHYT
Trigger: AGTGTAGTGGCCACCATCCAAATCACCAAAATGGTT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCACCATAACACCTCCTaGGAAGTACACCTCTCTAAT +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRHHNTS*EVHLSN
Trigger: ATTAGAGAGGTGTACTTCCAAGGAGGTGTTATGGTG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACACAGTGGCGCGATCTaGGCTCACTGCAAGCTCCGA +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTHSGAI*AHCKLR
Trigger: TCGGAGCTTGCAGTGAGCCAAGATCGCGCCACTGTG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTCCAGTGATGGACATTaGGCTTGTTTCCACTTTTGG +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRSSDGH*ACFHFW
Trigger: CCAAAAGTGGAAACAAGCCAAATGTCCATCACTGGA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTTTGTTCGTTTTGTTTaGGCCCTTCTGGTTGCCCAT +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRFVRFV*ALLVAH
Trigger: ATGGGCAACCAGAAGGGCCAAAACAAAACGAACAAA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTTAATCTTAAATGGCTaGCCTGAACCTGAATCCCCT +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRLILNG*PEPESP
Trigger: AGGGGATTCAGGTTCAGGCAAGCCATTTAAGATTAA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGACACCCGAATTCACGTaGGAATTAACTAGTCAGATC +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRTPEFT*ELTSQI
Trigger: GATCTGACTAGTTAATTCCAACGTGAATTCGGGTGT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCATATTGGGTTATATTaGCCCGGATCTTCATCAGTC +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRHIGLY*PGSSSV
Trigger: GACTGATGAAGATCCGGGCAAATATAACCCAATATG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTGTTGTTTTCCCCTGTaGTTCTTGCTGCTACTAAAC +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRCCFPL*FLLLLN
Trigger: GTTTAGTAGCAGCAAGAACAACAGGGGAAAACAACA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTACTTCAGCTTTCTCTaGGTCATATCTACCTACGAC +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRYFSFL*VISTYD
Trigger: GTCGTAGGTAGATATGACCAAGAGAAAGCTGAAGTA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAGTCTTTTGTTCGTTTaGTTTTGGCCCTTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRSLLFV*FWPFWL
Trigger: CAACCAGAAGGGCCAAAACAAAACGAACAAAAGACT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGGTGTACACAGTTCTTTaGAGTACATACCTAGGAGTG +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRVYTVL*STYLGV
Trigger: CACTCCTAGGTATGTACTCAAAAGAACTGTGTACAC...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGATCACTACTCCATTCTaGCTAATTTCCCCAACTTCA +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRITTPF*LISPTS
Trigger: TGAAGTTGGGGAAATTAGCAAGAATGGAGTAGTGAT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCAGCAGGTTAGATTCTaGTGGGTAAACTCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRQQVRF*WVNSLF
Trigger: AAAAAGAGAGTTTACCCACAAGAATCTAACCTGCTG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCATCTAAGGTCTCAGTaGGCTGGCATAAAGTTTTTA +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRHLRSQ*AGIKFL
Trigger: TAAAAACTTTATGCCAGCCAACTGAGACCTTAGATG...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTCTTCTACAGATTTCTaGGCATCAGAAGTTTCATGT +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRSSTDF*ASEVSC
Trigger: ACATGAAACTTCTGATGCCAAGAAATCTGTAGAAGA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAATTGGGTCAAGAAACTaGGCCCAGCCTGAAGGCAGT +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTIGSRN*AQPEGS
Trigger: ACTGCCTTCAGGCTGGGCCAAGTTTCTTGACCCAAT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTTTAAAAAGCATCTCTaGGCCCTATCATTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRFKKHL*ALSFLF
Trigger: GAACAGAAATGATAGGGCCAAGAGATGCTTTTTAAA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGATAAGCCATATGGTATaGGCTGCAACTATTCAGTTT +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRISHMV*AATIQF
Trigger: AAACTGAATAGTTGCAGCCAATACCATATGGCTTAT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTTAAGCTTTTTCTCTTaGTCTCTGTTGTTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRLSFFS*SLLFCS
Trigger: ACTGCAGAACAACAGAGACAAAGAGAAAAAGCTTAA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGTGTCTGTTGGTCAATTaGTTCACATTTGGGCTAATT +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRCLLVN*FTFGLI
Trigger: AATTAGCCCAAATGTGAACAAATTGACCAACAGACA...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp GTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGAAACATTGGTGTACATaGGTGTACATTTCAGCTAGA +
Preference number: 5 (lower is better)
Translates to: VIWMVATTLLSARIQSPRKHWCT*VYISAR
Trigger: TCTAGCTGAAATGTACACCAATGTACACCAATGTTT...CCTGGGTGACTGAATTCTTGCAGAAAGCAGTGTAGTGGCCACCATCCAAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATGTGGTTTCACCATGTaGGCCAGACTGGTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTCGFTM*ARLVWN
Trigger: GTTCCAGACCAGTCTGGCCAACATGGTGAAACCACA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGGGACCTCTGCTGTGTaGTTTTCCCCTGTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTGTSAV*FSPVVL
Trigger: AAGAACAACAGGGGAAAACAACACAGCAGAGGTCCC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGACAATATCTCACTCTaGCTCAGGCTGGAGTGCAAT +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTDNISL*LRLECN
Trigger: ATTGCACTCCAGCCTGAGCAAGAGTGAGATATTGTC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGGCCTGATATAGCTTaGATAACACACGAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTRPDIA*ITHESV
Trigger: CACTGACTCGTGTGTTATCAAAGCTATATCAGGCCT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGGCTTGTTTCCACTTTaGGCTGTCATCAGTAATGCT +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTGLFPL*AVISNA
Trigger: AGCATTACTGATGACAGCCAAAAGTGGAAACAAGCC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATCCAGTGATGGACATTaGGCTTGTTTCCACTTTTGG +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSSDGH*ACFHFW
Trigger: CCAAAAGTGGAAACAAGCCAAATGTCCATCACTGGA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATTAATCTTAAATGGCTaGCCTGAACCTGAATCCCCT +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLILNG*PEPESP
Trigger: AGGGGATTCAGGTTCAGGCAAGCCATTTAAGATTAA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGTCTTTTGTTCGTTTaGTTTTGGCCCTTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSLLFV*FWPFWL
Trigger: CAACCAGAAGGGCCAAAACAAAACGAACAAAAGACT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAACACTTGGTAGTCTTTaGTTCGTTTTGTTTTGGCCC +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTTLGSL*FVLFWP
Trigger: GGGCCAAAACAAAACGAACAAAAGACTACCAAGTGT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGTGTACACAGTTCTTTaGAGTACATACCTAGGAGTG +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTVYTVL*STYLGV
Trigger: CACTCCTAGGTATGTACTCAAAAGAACTGTGTACAC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAATCACTACTCCATTCTaGCTAATTTCCCCAACTTCA +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTITTPF*LISPTS
Trigger: TGAAGTTGGGGAAATTAGCAAGAATGGAGTAGTGAT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATCTTCTACAGATTTCTaGGCATCAGAAGTTTCATGT +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSSTDF*ASEVSC
Trigger: ACATGAAACTTCTGATGCCAAGAAATCTGTAGAAGA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAGCCCACCGTAGTGATTaGAAACAGAAAACAAATTAT +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTAHRSD*KQKTNY
Trigger: ATAATTTGTTTTCTGTTTCAAATCACTACGGTGGGC...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACACTTGTTAAATGTTATTaGTCAGCACTGACCGGAATT +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTLVKCY*SALTGI
Trigger: AATTCCGGTCAGTGCTGACAAATAACATTTAACAAG...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATGTCTGTTGGTCAATTaGTTCACATTTGGGCTAATT +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTCLLVN*FTFGLI
Trigger: AATTAGCCCAAATGTGAACAAATTGACCAACAGACA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACATGGTATGTCATGGTTTaGAGTTGCATTTTCCTAATG +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTWYVMV*SCIFLM
Trigger: CATTAGGAAAATGCAACTCAAAACCATGACATACCA...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS-3UTR CAA 90 bp CATATAATGCTGGTTTTCCTATGCTGTGTGTGTCTGTTGGTCAATTTGTTCACAAGTTGCCTTAAATCCTaGTTAACACTTGGTAGTCTT +
Preference number: 5 (lower is better)
Translates to: HIMLVFLCCVCLLVNLFTSCLKS*LTLGSL
Trigger: AAGACTACCAAGTGTTAACAAGGATTTAAGGCAACT...TGTGAACAAATTGACCAACAGACACACACAGCATAGGAAAACCAGCATTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307179.9
ENST00000396444.7
CDS CCA 72 bp CCGCGGACAGAGCTTGTCTCCGGGGTAACCAGCAGCTaGTGGAAGGAAAGGCGTTCATCGTTCACAGCGGAC +
Preference number: 6 (lower is better)
Translates to: PRTELVSGVTSS*WKERRSSFTAD
Trigger: GTCCGCTGTGAACGATGAACGCCTTTCCTTCCACCAGCTGCTGGTTACCCCGGAGACAAGCTCTGTCCGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396444.7
ENST00000558892.1
ENST00000559329.5
ENST00000560885.5
ENST00000625664.2
CDS CCA 72 bp CGGACAGAGCTTGTCTCCGGGGTAACCAGCAGCTGGTaGAAGGAAAGGCGTTCATCGTTCACAGCGGACGAC +
Preference number: 6 (lower is better)
Translates to: RTELVSGVTSSW*KERRSSFTADD
Trigger: GTCGTCCGCTGTGAACGATGAACGCCTTTCCTTCCACCAGCTGCTGGTTACCCCGGAGACAAGCTCTGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396444.7
ENST00000558892.1
ENST00000559329.5
ENST00000560885.5
ENST00000625664.2
CDS CCA 72 bp GCCTGTAATGATAGCAGGTGGCAAGGTGGAGGTAGATaGCCTTCTGTGGTAGTTCACGGGGAGGAAGACAGT +
Preference number: 6 (lower is better)
Translates to: ACNDSRWQGGGR*PSVVVHGEEDS
Trigger: ACTGTCTTCCTCCCCGTGAACTACCACAGAAGGCCATCTACCTCCACCTTGCCACCTGCTATCATTACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561206.1