RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP6NL (Homo sapiens)

Ensembl gene IDs: ENSG00000148429

Ensembl transcript IDs: ENST00000277575.5, ENST00000379237.6, ENST00000443016.1, ENST00000606752.1, ENST00000609104.5, ENST00000609853.1

Found 778 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCAGTCTGACTCCCATCCCAGGGCACTCAAACATCAGCTGCGACTaGCCCTGCGAGTCCTTCGGAGGCTCCTTTCCCTCTGGTACCTCT +
Preference number: 1 (lower is better)
Translates to: ASLTPIPGHSNISCD*PCESFGGSFPSGTS
Trigger: AGAGGTACCAGAGGGAAAGGAGCCTCCGAAGGACTCGCAGGGGCAGTCGCAGCTGATGTTTGAGTGCCCTGGGATGGGAGTCAGACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 90 bp ACCTCAGCCAGTCTGACTCCCATCCCAGGGCACTCAAACATCAGCTaGGACTGCCCCTGCGAGTCCTTCGGAGGCTCCTTTCCCTCTGGT +
Preference number: 1 (lower is better)
Translates to: TSASLTPIPGHSNIS*DCPCESFGGSFPSG
Trigger: ACCAGAGGGAAAGGAGCCTCCGAAGGACTCGCAGGGGCAGTCGCAGCTGATGTTTGAGTGCCCTGGGATGGGAGTCAGACTGGCTGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 90 bp AAGTCCAAGTGGACTTTCCAGGCCTCCCTCACTGGGCCCTCCTGCTaGATTTCCAGTGCAGATGCTGCCTCCTTCCTGGAGCCCCTGCTC +
Preference number: 1 (lower is better)
Translates to: KSKWTFQASLTGPSC*ISSADAASFLEPLL
Trigger: GAGCAGGGGCTCCAGGAAGGAGGCAGCATCTGCACTGGAAATGCAGCAGGAGGGCCCAGTGAGGGAGGCCTGGAAAGTCCACTTGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 90 bp GTCAAGTCCAAGTGGACTTTCCAGGCCTCCCTCACTGGGCCCTCCTaGTGCATTTCCAGTGCAGATGCTGCCTCCTTCCTGGAGCCCCTG +
Preference number: 1 (lower is better)
Translates to: VKSKWTFQASLTGPS*CISSADAASFLEPL
Trigger: CAGGGGCTCCAGGAAGGAGGCAGCATCTGCACTGGAAATGCAGCAGGAGGGCCCAGTGAGGGAGGCCTGGAAAGTCCACTTGGACTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 90 bp TGGCATATCTCCCAGGCCAGCACTCTTGTGACTCTGCCCCCTACATaGTGGGGAGTCTCTATCTCTCTCTGGGACAGCCAACCACCTGTC +
Preference number: 1 (lower is better)
Translates to: WHISQASTLVTLPPT*WGVSISLWDSQPPV
Trigger: GACAGGTGGTTGGCTGTCCCAGAGAGAGATAGAGACTCCCCAGCATGTAGGGGGCAGAGTCACAAGAGTGCTGGCCTGGGAGATATGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CCA 90 bp GCTCCTCATTGTCAAGTCCAAGTGGACTTTCCAGGCCTCCCTCACTaGGCCCTCCTGCTGCATTTCCAGTGCAGATGCTGCCTCCTTCCT +
Preference number: 1 (lower is better)
Translates to: APHCQVQVDFPGLPH*ALLLHFQCRCCLLP
Trigger: AGGAAGGAGGCAGCATCTGCACTGGAAATGCAGCAGGAGGGCCCAGTGAGGGAGGCCTGGAAAGTCCACTTGGACTTGACAATGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CCA 90 bp CATATCTCCCAGGCCAGCACTCTTGTGACTCTGCCCCCTACATGCTaGGGAGTCTCTATCTCTCTCTGGGACAGCCAACCACCTGTCAGA +
Preference number: 1 (lower is better)
Translates to: HISQASTLVTLPPTC*GVSISLWDSQPPVR
Trigger: TCTGACAGGTGGTTGGCTGTCCCAGAGAGAGATAGAGACTCCCCAGCATGTAGGGGGCAGAGTCACAAGAGTGCTGGCCTGGGAGATATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CCA 90 bp CAGCTGCGACTGCCCCTGCGAGTCCTTCGGAGGCTCCTTTCCCTCTaGTACCTCTTAAATGCCCACACCTTACAGCAGAGCAAAGTAAGG +
Preference number: 1 (lower is better)
Translates to: QLRLPLRVLRRLLSL*YLLNAHTLQQSKVR
Trigger: CCTTACTTTGCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCGAAGGACTCGCAGGGGCAGTCGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CCA 90 bp ATGGCACAGTCTCCTCAGATTGCCCTGCCTGTGCCTCCTCCCTCCTaGGTCACATGTGACCTTACTGTGTCTTTACCTCTGGACTCCCAC +
Preference number: 1 (lower is better)
Translates to: MAQSPQIALPVPPPS*VTCDLTVSLPLDSH
Trigger: GTGGGAGTCCAGAGGTAAAGACACAGTAAGGTCACATGTGACCCAGGAGGGAGGAGGCACAGGCAGGGCAATCTGAGGAGACTGTGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR TCA 90 bp GAACGGTGGCTGGCCATGAATGCAAAATTGAAACCTCAGCCAGTCTaGCTCCCATCCCAGGGCACTCAAACATCAGCTGCGACTGCCCCT +
Preference number: 1 (lower is better)
Translates to: ERWLAMNAKLKPQPV*LPSQGTQTSAATAP
Trigger: AGGGGCAGTCGCAGCTGATGTTTGAGTGCCCTGGGATGGGAGTCAGACTGGCTGAGGTTTCAATTTTGCATTCATGGCCAGCCACCGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 90 bp ACATCACAGTGGCAAATTTCCTCACACATCCCATGCAGCTGCTCTTaGCATCGGTCCCCTCTGCAGAATGCCCTGCTCTCTCCCCCTCTT +
Preference number: 1 (lower is better)
Translates to: TSQWQISSHIPCSCS*HRSPLQNALLSPPL
Trigger: AAGAGGGGGAGAGAGCAGGGCATTCTGCAGAGGGGACCGATGGCAAGAGCAGCTGCATGGGATGTGTGAGGAAATTTGCCACTGTGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 90 bp GTGGCTGATAACTTAACAAATGTCTTCGTGTCTGCGGCTCAGCTGTaGTGTTGTCCCAGGTGCCCCACCTTGGCTGGCATATCTCCCAGG +
Preference number: 1 (lower is better)
Translates to: VADNLTNVFVSAAQL*CCPRCPTLAGISPR
Trigger: CCTGGGAGATATGCCAGCCAAGGTGGGGCACCTGGGACAACAGCACAGCTGAGCCGCAGACACGAAGACATTTGTTAAGTTATCAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 90 bp ACATACACATCACAGTGGCAAATTTCCTCACACATCCCATGCAGCTaGTCTTGCCATCGGTCCCCTCTGCAGAATGCCCTGCTCTCTCCC +
Preference number: 1 (lower is better)
Translates to: TYTSQWQISSHIPCS*SCHRSPLQNALLSP
Trigger: GGGAGAGAGCAGGGCATTCTGCAGAGGGGACCGATGGCAAGAGCAGCTGCATGGGATGTGTGAGGAAATTTGCCACTGTGATGTGTATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 90 bp TACCCCACATACACATCACAGTGGCAAATTTCCTCACACATCCCATaGAGCTGCTCTTGCCATCGGTCCCCTCTGCAGAATGCCCTGCTC +
Preference number: 1 (lower is better)
Translates to: YPTYTSQWQISSHIP*SCSCHRSPLQNALL
Trigger: GAGCAGGGCATTCTGCAGAGGGGACCGATGGCAAGAGCAGCTGCATGGGATGTGTGAGGAAATTTGCCACTGTGATGTGTATGTGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 90 bp GAGGGACCACACCAGGTCAAAACCAACTACAGGATCAAGTTCAACTaGACACAACTCCCTCCACCATCCTGTCTCTGTGGAGCCCGTCAC +
Preference number: 1 (lower is better)
Translates to: EGPHQVKTNYRIKFN*TQLPPPSCLCGARH
Trigger: GTGACGGGCTCCACAGAGACAGGATGGTGGAGGGAGTTGTGTGCAGTTGAACTTGATCCTGTAGTTGGTTTTGACCTGGTGTGGTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 90 bp CCTGCGAGTCCTTCGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATaGCCACACCTTACAGCAGAGCAAAGTAAGGCCCAGAAGAGGTGT +
Preference number: 1 (lower is better)
Translates to: PASPSEAPFPLVPLK*PHLTAEQSKAQKRC
Trigger: ACACCTCTTCTGGGCCTTACTTTGCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCGAAGGACTCGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 90 bp TTTCCTCACACATCCCATGCAGCTGCTCTTGCCATCGGTCCCCTCTaGAGAATGCCCTGCTCTCTCCCCCTCTTGTCTTTCTATATGCTT +
Preference number: 1 (lower is better)
Translates to: FPHTSHAAALAIGPL*RMPCSLPLLSFYML
Trigger: AAGCATATAGAAAGACAAGAGGGGGAGAGAGCAGGGCATTCTGCAGAGGGGACCGATGGCAAGAGCAGCTGCATGGGATGTGTGAGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CCA 90 bp CTCACTGCCCCCAGGCCTGTTCCCTCACATTTCACTTCCACAGCATaGAGGGACCACACCAGGTCAAAACCAACTACAGGATCAAGTTCA +
Preference number: 1 (lower is better)
Translates to: LTAPRPVPSHFTSTA*RDHTRSKPTTGSSS
Trigger: TGAACTTGATCCTGTAGTTGGTTTTGACCTGGTGTGGTCCCTCCATGCTGTGGAAGTGAAATGTGAGGGAACAGGCCTGGGGGCAGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 90 bp TGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTaGAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACA +
Preference number: 1 (lower is better)
Translates to: WLPHMSTVSTEGSVS*NFSCSEIRKSQTRT
Trigger: TGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR GCA 90 bp TACATGATGATCTCAACAGGACCTGGAACGGTGGCTGGCCATGAATaGAAAATTGAAACCTCAGCCAGTCTGACTCCCATCCCAGGGCAC +
Preference number: 1 (lower is better)
Translates to: YMMISTGPGTVAGHE*KIETSASLTPIPGH
Trigger: GTGCCCTGGGATGGGAGTCAGACTGGCTGAGGTTTCAATTTTGCATTCATGGCCAGCCACCGTTCCAGGTCCTGTTGAGATCATCATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 90 bp AAGCTGCAGGTCCTCCGTGAAGAGATCCTACTCGTAGACATGGCATaGTTTTCTCGCACCATGACAGTGAAGAGAAAGGGGTTTCAGCAC +
Preference number: 1 (lower is better)
Translates to: KLQVLREEILLVDMA*FSRTMTVKRKGFQH
Trigger: GTGCTGAAACCCCTTTCTCTTCACTGTCATGGTGCGAGAAAAGCATGCCATGTCTACGAGTAGGATCTCTTCACGGAGGACCTGCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 90 bp CATCCCATCTCATCCAAACCTTTGAGCTGCATCACTTCCCACTTGTaGCTGTGGCCACTGCAGTCTGATTCTGACTCTAGGAATCACAGC +
Preference number: 1 (lower is better)
Translates to: HPISSKPLSCITSHL*LWPLQSDSDSRNHS
Trigger: GCTGTGATTCCTAGAGTCAGAATCAGACTGCAGTGGCCACAGGCACAAGTGGGAAGTGATGCAGCTCAAAGGTTTGGATGAGATGGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CCA 90 bp CCGTCGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATaGCCACCCTGGGACCTTCGTGGGGAGAAGCCATGTGAGTCGAGG +
Preference number: 1 (lower is better)
Translates to: PSTTFHKEDRNGLYK*PPWDLRGEKPCESR
Trigger: CCTCGACTCACATGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR TCA 90 bp GTCTGTTCTTGTGCTTGCATCCTAAGGGAACCCGAGGGAGAGACCTaGAGTGACTGCAACTATGAAAGTCTACTTGAGAGTCCCACTGAG +
Preference number: 1 (lower is better)
Translates to: VCSCACILREPEGET*SDCNYESLLESPTE
Trigger: CTCAGTGGGACTCTCAAGTAGACTTTCATAGTTGCAGTCACTTCAGGTCTCTCCCTCGGGTTCCCTTAGGATGCAAGCACAAGAACAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 90 bp CCCTCTGCAGAATGCCCTGCTCTCTCCCCCTCTTGTCTTTCTATATaGTTGTCCTGTCAGGCTCAGCTGAGACAAATCCTTCATAAGACT +
Preference number: 1 (lower is better)
Translates to: PSAECPALSPSCLSI*LSCQAQLRQILHKT
Trigger: AGTCTTATGAAGGATTTGTCTCAGCTGAGCCTGACAGGACAAGCATATAGAAAGACAAGAGGGGGAGAGAGCAGGGCATTCTGCAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CCA 90 bp TCGAGGCAGAAGAAAGAAGTAACCACACTGCTAATGCAGTTAGTGTaGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGC +
Preference number: 1 (lower is better)
Translates to: SRQKKEVTTLLMQLV*LPHMSTVSTEGSVS
Trigger: GCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACTTCTTTCTTCTGCCTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR TCA 90 bp GGTCACATTGCTAACATGTGGCACACTCAGACTACAATGCAGACTTaGCAACCTCCAGTCCACTCTACCAGACTGACAAATGCACAGGGA +
Preference number: 1 (lower is better)
Translates to: GHIANMWHTQTTMQT*QPPVHSTRLTNAQG
Trigger: TCCCTGTGCATTTGTCAGTCTGGTAGAGTGGACTGGAGGTTGTCAAGTCTGCATTGTAGTCTGAGTGTGCCACATGTTAGCAATGTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 90 bp ATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCAACTTCTCCTaGTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACAAAC +
Preference number: 1 (lower is better)
Translates to: MSTVSTEGSVSCNFS*SEIRKSQTRTKGTN
Trigger: GTTTGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCAGCTTACTGATCCCTCAGTGCTCACAGTACTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR TCA 90 bp CCAAGAATAATCTCCAATCCAGAAGATGAAGCTGCAGGTCCTCCGTaGAGAGATCCTACTCGTAGACATGGCATGCTTTTCTCGCACCAT +
Preference number: 1 (lower is better)
Translates to: PRIISNPEDEAAGPP*RDPTRRHGMLFSHH
Trigger: ATGGTGCGAGAAAAGCATGCCATGTCTACGAGTAGGATCTCTTCACGGAGGACCTGCAGCTTCATCTTCTGGATTGGAGATTATTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CCA 90 bp ACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTaGGACCTTCGTGGGGAGAAGCCATGTGAGTCGAGGCAGAAGAAA +
Preference number: 1 (lower is better)
Translates to: TFHKEDRNGLYKWPP*DLRGEKPCESRQKK
Trigger: TTTCTTCTGCCTCGACTCACATGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR TCA 90 bp TGCCAAACACACAGCAAGCATTCAGTGTTAGCTGTTGTCTCATTATaGCCATTCGGATTACACGCATCCAGTTGTCTTGCCAGTTTCCCT +
Preference number: 1 (lower is better)
Translates to: CQTHSKHSVLAVVSL*PFGLHASSCLASFP
Trigger: AGGGAAACTGGCAAGACAACTGGATGCGTGTAATCCGAATGGTCATAATGAGACAACAGCTAACACTGAATGCTTGCTGTGTGTTTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR TCA 90 bp AGACTACAATGCAGACTTGACAACCTCCAGTCCACTCTACCAGACTaGCAAATGCACAGGGATGTTGATGTCTTTTCAAAGATAACTCCG +
Preference number: 1 (lower is better)
Translates to: RLQCRLDNLQSTLPD*QMHRDVDVFSKITP
Trigger: CGGAGTTATCTTTGAAAAGACATCAACATCCCTGTGCATTTGTCAGTCTGGTAGAGTGGACTGGAGGTTGTCAAGTCTGCATTGTAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 90 bp AAACGCACTAAGACCAATCTCTTAGTATGTGGATGTGATAAGCACTaGTGCACCTTTGGCCGTAAACTTATTTTAAGTGCCCCGATTTTT +
Preference number: 1 (lower is better)
Translates to: KRTKTNLLVCGCDKH*CTFGRKLILSAPIF
Trigger: AAAAATCGGGGCACTTAAAATAAGTTTACGGCCAAAGGTGCAGCAGTGCTTATCACATCCACATACTAAGAGATTGGTCTTAGTGCGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR TCA 90 bp ATTACTGATAGATGCCACTACAGGGAGGAACTTCAGAAACATTACTaGGTGAAAGAAGCCAGACACAAAAGACCATGTCTGATTCCATTT +
Preference number: 1 (lower is better)
Translates to: ITDRCHYREELQKHY*VKEARHKRPCLIPF
Trigger: AAATGGAATCAGACATGGTCTTTTGTGTCTGGCTTCTTTCACTCAGTAATGTTTCTGAAGTTCCTCCCTGTAGTGGCATCTATCAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 90 bp TGTTGTCTCATTATGACCATTCGGATTACACGCATCCAGTTGTCTTaGCAGTTTCCCTTGGTAATTAGTTCTCAATCACCTTTTCTTCAT +
Preference number: 1 (lower is better)
Translates to: CCLIMTIRITRIQLS*QFPLVISSQSPFLH
Trigger: ATGAAGAAAAGGTGATTGAGAACTAATTACCAAGGGAAACTGGCAAGACAACTGGATGCGTGTAATCCGAATGGTCATAATGAGACAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR TCA 90 bp TTTGTCCATAATATGCCTGTAATAGCCTGGGCATATCTCCAACACTaGTTGACAGATTACAAAACACACTGTCAGATTAGAACACACATC +
Preference number: 1 (lower is better)
Translates to: FVHNMPVIAWAYLQH*LTDYKTHCQIRTHI
Trigger: GATGTGTGTTCTAATCTGACAGTGTGTTTTGTAATCTGTCAATCAGTGTTGGAGATATGCCCAGGCTATTACAGGCATATTATGGACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR TCA 90 bp CTGCCATTTATTAAGCAACTCACAGTAACAAGTAGAGAAGTTGTATaGTCTTACTACACCACAGATAGTCATCATTCTACAGGAGTTAAC +
Preference number: 1 (lower is better)
Translates to: LPFIKQLTVTSREVV*SYYTTDSHHSTGVN
Trigger: GTTAACTCCTGTAGAATGATGACTATCTGTGGTGTAGTAAGATCATACAACTTCTCTACTTGTTACTGTGAGTTGCTTAATAAATGGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
3UTR TCA 90 bp GAAACATCAATGTCGGGTTTTCTACTATTCAAATATAAGCAATGTTaGAAACAAGCTCCCCAATTAAACACGAAGTCATACTCTCTTGGA +
Preference number: 1 (lower is better)
Translates to: ETSMSGFLLFKYKQC*KQAPQLNTKSYSLG
Trigger: TCCAAGAGAGTATGACTTCGTGTTTAATTGGGGAGCTTGTTTTCAACATTGCTTATATTTGAATAGTAGAAAACCCGACATTGATGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR CCA 90 bp AGGGCACTCAAACATCAGCTGCGACTGCCCCTGCGAGTCCTTCGGAGGCTCCTTGTCTCTATCTCTCTCTaGGACAGCCAACCACCTGTC +
Preference number: 2 (lower is better)
Translates to: RALKHQLRLPLRVLRRLLVSISL*DSQPPV
Trigger: GACAGGTGGTTGGCTGTCCCAGAGAGAGATAGAGAC...AAGGAGCCTCCGAAGGACTCGCAGGGGCAGTCGCAGCTGATGTTTGAGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CAA 90 bp CACATCACAGTGGCAAATTTCCTCACACATCCCATGCAGCTGCTCTaGCCATCGGTCCCCTCTGCAGAATGCCCTGCTCTCTCCCCCTCT +
Preference number: 2 (lower is better)
Translates to: HITVANFLTHPMQLL*PSVPSAECPALSPS
Trigger: AGAGGGGGAGAGAGCAGGGCATTCTGCAGAGGGGACCGATGGCAAGAGCAGCTGCATGGGATGTGTGAGGAAATTTGCCACTGTGATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR CCA 90 bp CCTTGGCTGGCATATCTCCCAGGCCAGCACTCTTGTGACTCTGCCCCCTACATGGACACAGCCATACAATaGAACAGCATTCAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: PWLAYLPGQHSCDSAPYMDTAIQ*NSIQPS
Trigger: GCTGGGCTGAATGCTGTTCCATTGTATGGCTGTGTC...CATGTAGGGGGCAGAGTCACAAGAGTGCTGGCCTGGGAGATATGCCAGCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR TCA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGCTGCCGTCTTCCGTTTaGTGCCGTAACTGTCAGCAG +
Preference number: 2 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWLPSSV*CRNCQQ
Trigger: CTGCTGACAGTTACGGCATCAAACGGAAGACGGCAG...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR GCA 90 bp CCTTGGCTGGCATATCTCCCAGGCCAGCACTCTTGTGACTCTGCCCCCTACATGAGCTGCAACTTCTCCTaGTCTGAGATTCGCAAGAGT +
Preference number: 2 (lower is better)
Translates to: PWLAYLPGQHSCDSAPYMSCNFS*SEIRKS
Trigger: ACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCAGCT...CATGTAGGGGGCAGAGTCACAAGAGTGCTGGCCTGGGAGATATGCCAGCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR GCA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCTCTGTTGAGGAGCACTaGAAGCAGCACCTGAGTGGA +
Preference number: 2 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSSVEEH*KQHLSG
Trigger: TCCACTCAGGTGCTGCTTGCAGTGCTCCTCAACAGA...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR TCA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGCCCGAGGGAGAGACCTaGAGTGACTGCAACTATGAA +
Preference number: 2 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWPEGET*SDCNYE
Trigger: TTCATAGTTGCAGTCACTTCAGGTCTCTCCCTCGGG...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR TCA 90 bp CCTTGGCTGGCATATCTCCCAGGCCAGCACTCTTGTGACTCTGCCCCCTACATGTCAGAGCAAAGGCTCTaGAGAAAACAGCTCCATTCA +
Preference number: 2 (lower is better)
Translates to: PWLAYLPGQHSCDSAPYMSEQRL*RKQLHS
Trigger: TGAATGGAGCTGTTTTCTTCAGAGCCTTTGCTCTGA...CATGTAGGGGGCAGAGTCACAAGAGTGCTGGCCTGGGAGATATGCCAGCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR CCA 90 bp CCTTGGCTGGCATATCTCCCAGGCCAGCACTCTTGTGACTCTGCCCCCTACATGTTGACAGGGACACAGTaGGGAAAAGCAGTCCTTTTA +
Preference number: 2 (lower is better)
Translates to: PWLAYLPGQHSCDSAPYMLTGTQ*GKAVLL
Trigger: TAAAAGGACTGCTTTTCCCCACTGTGTCCCTGTCAA...CATGTAGGGGGCAGAGTCACAAGAGTGCTGGCCTGGGAGATATGCCAGCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR TCA 90 bp ATCTCAACAGGACCTGGAACGGTGGCTGGCCATGAATGCAAAATTGAAACCTCAATGGTCTCGATTTCCTaGCCTCGTGATCCGCCCACC +
Preference number: 2 (lower is better)
Translates to: ISTGPGTVAGHECKIETSMVSIS*PRDPPT
Trigger: GGTGGGCGGATCACGAGGTCAGGAAATCGAGACCAT...TGAGGTTTCAATTTTGCATTCATGGCCAGCCACCGTTCCAGGTCCTGTTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR TCA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCTGCAGAAATCCATCTTaGCCCTTCTTCTCCCCATAC +
Preference number: 2 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSCRNPS*PFFSPY
Trigger: GTATGGGGAGAAGAAGGGTCAAGATGGATTTCTGCA...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR GCA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCAGCTTCCACCTGACCTaGATCAACAGCCCAGTTATT +
Preference number: 2 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSSFHLT*INSPVI
Trigger: AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCT...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR TCA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGCAACTTCTCCTGCTCTaGGATTCGCAAGAGTCAGAC +
Preference number: 2 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTEQLLLL*DSQESD
Trigger: GTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTG...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR TCA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCAGAGTACTGTGAGCACTaGGGGATCAGTAAGCTGCAA +
Preference number: 2 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPEYCEH*GISKLQ
Trigger: TTGCAGCTTACTGATCCCTCAGTGCTCACAGTACTC...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR TCA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCCAGCTCCTCATATACTaGAAATGCTCACAGACTTCC +
Preference number: 2 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSQLLIY*KCSQTS
Trigger: GGAAGTCTGTGAGCATTTTCAGTATATGAGGAGCTG...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR TCA 90 bp AGGGCACTCAAACATCAGCTGCGACTGCCCCTGCGAGTCCTTCGGAGGCTCCTTGCATATCTCCAACACTaGTTGACAGATTACAAAACA +
Preference number: 2 (lower is better)
Translates to: RALKHQLRLPLRVLRRLLAYLQH*LTDYKT
Trigger: TGTTTTGTAATCTGTCAATCAGTGTTGGAGATATGC...AAGGAGCCTCCGAAGGACTCGCAGGGGCAGTCGCAGCTGATGTTTGAGTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR TCA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGCCTGTCAGGCTCAGCTaGGACAAATCCTTCATAAGA +
Preference number: 2 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWPVRLS*DKSFIR
Trigger: TCTTATGAAGGATTTGTCTCAGCTGAGCCTGACAGG...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR GCA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGCGTGCATCCCTAAATaGTATTGCGATGTTTCCGGG +
Preference number: 2 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTEACIPK*YCDVSG
Trigger: CCCGGAAACATCGCAATAGCATTTAGGGATGCACGC...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR GCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCGGATGTGATAAGCACTaGTGCACCTTTGGCCGTAAA +
Preference number: 2 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSGCDKH*CTFGRK
Trigger: TTTACGGCCAAAGGTGCAGCAGTGCTTATCACATCC...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR CCA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCCACATTGCTAACATGTaGCACACTCAGACTACAATG +
Preference number: 2 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSHIANM*HTQTTM
Trigger: CATTGTAGTCTGAGTGTGCCACATGTTAGCAATGTG...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CAA 90 bp TCTGCAGAATGCCCTGCTCTCTCCCCCTCTTGTCTTTCTATATGCTaGTCCTGTCAGGCTCAGCTGAGACAAATCCTTCATAAGACTTCC +
Preference number: 2 (lower is better)
Translates to: SAECPALSPSCLSIC*SCQAQLRQILHKTS
Trigger: GGAAGTCTTATGAAGGATTTGTCTCAGCTGAGCCTGACAGGACAAGCATATAGAAAGACAAGAGGGGGAGAGAGCAGGGCATTCTGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR GCA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCCAGACAGGAGAGATGTaGGAGTTGTTTACAATAGTA +
Preference number: 2 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSQTGEM*ELFTIV
Trigger: TACTATTGTAAACAACTCGCACATCTCTCCTGTCTG...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR GCA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCATGTGATAAGCACTGCTaGACCTTTGGCCGTAAACTT +
Preference number: 2 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPCDKHC*TFGRKL
Trigger: AAGTTTACGGCCAAAGGTGCAGCAGTGCTTATCACA...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR GCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGGGATGTGATAAGCACTaGTGCACCTTTGGCCGTAAA +
Preference number: 2 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEGCDKH*CTFGRK
Trigger: TTTACGGCCAAAGGTGCAGCAGTGCTTATCACATCC...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR GCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGAGCTGCAACTTCTCCTaGTCTGAGATTCGCAAGAGT +
Preference number: 2 (lower is better)
Translates to: SNHTANAVSVAAPHEYCESCNFS*SEIRKS
Trigger: ACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCAGCT...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR CCA 90 bp ATCTCAACAGGACCTGGAACGGTGGCTGGCCATGAATGCAAAATTGAAACCTCAAAAAGCCAGGTGTGGTaGTGGGCACCTTTAATCCCA +
Preference number: 2 (lower is better)
Translates to: ISTGPGTVAGHECKIETSKSQVW*WAPLIP
Trigger: TGGGATTAAAGGTGCCCACCACCACACCTGGCTTTT...TGAGGTTTCAATTTTGCATTCATGGCCAGCCACCGTTCCAGGTCCTGTTGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CAA 90 bp CAGCAATATCCGTCGACTACATTCCATAAAGAGGACAGAAATGGATaGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCATGT +
Preference number: 2 (lower is better)
Translates to: QQYPSTTFHKEDRNG*YKWPPWDLRGEKPC
Trigger: ACATGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCGACGGATATTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR CAA 90 bp GAGGAAATGGATCAGAATATAAGCCCCATGAGGACAGGGACTTTGTaGTCCTGTTACATGATGATCTCAACAGGACCTGGAACGGTGGCT +
Preference number: 2 (lower is better)
Translates to: EEMDQNISPMRTGTL*SCYMMISTGPGTVA
Trigger: AGCCACCGTTCCAGGTCCTGTTGAGATCATCATGTAACAGGACAACAAAGTCCCTGTCCTCATGGGGCTTATATTCTGATCCATTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR TCA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGCATACTTTTGTACCTTaGAAGTTTAAAGCCCCACCT +
Preference number: 2 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWHTFVP*KFKAPP
Trigger: AGGTGGGGCTTTAAACTTTCAAGGTACAAAAGTATG...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR GCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCAATTACCACTGTGCGTaGATCCCTAAATGCTATTGC +
Preference number: 2 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSNYHCA*IPKCYC
Trigger: GCAATAGCATTTAGGGATGCACGCACAGTGGTAATT...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR GCA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGTTTAAAGCCCCACCTTaGAACAGGAAGAAACATCAA +
Preference number: 2 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWFKAPP*NRKKHQ
Trigger: TTGATGTTTCTTCCTGTTGCAAGGTGGGGCTTTAAA...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR GCA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGAGAACCCTCCTACATTaGTGGTGCAAATGTAAAATG +
Preference number: 2 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWRTLLH*WCKCKM
Trigger: CATTTTACATTTGCACCAGCAATGTAGGAGGGTTCT...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CAA 90 bp GATGAGGAAATGGATCAGAATATAAGCCCCATGAGGACAGGGACTTaGTTGTCCTGTTACATGATGATCTCAACAGGACCTGGAACGGTG +
Preference number: 2 (lower is better)
Translates to: DEEMDQNISPMRTGT*LSCYMMISTGPGTV
Trigger: CACCGTTCCAGGTCCTGTTGAGATCATCATGTAACAGGACAACAAAGTCCCTGTCCTCATGGGGCTTATATTCTGATCCATTTCCTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR TCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACGCATCTACGTGGGGCTaGAGACATTTCCCTGTATTC +
Preference number: 2 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNASTWG*RHFPVF
Trigger: GAATACAGGGAAATGTCTTCAGCCCCACGTAGATGC...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR CCA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAATATAAATGGCCACCCTaGGACCTTCGTGGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: KPHLATGRNINVGFSTIQYKWPP*DLRGEK
Trigger: CTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATA...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR CCA 90 bp AGAGCAAAGGCTCTGAAGAAAACAGCTCCATTCACGAGAGAAAGCAGTACTAATTTCACTTCCACAGCATaGAGGGACCACACCAGGTCA +
Preference number: 2 (lower is better)
Translates to: RAKALKKTAPFTRESSTNFTSTA*RDHTRS
Trigger: TGACCTGGTGTGGTCCCTCCATGCTGTGGAAGTGAA...ATTAGTACTGCTTTCTCTCGTGAATGGAGCTGTTTTCTTCAGAGCCTTTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CAA 90 bp AACCCGAGGGAGAGACCTGAAGTGACTGCAACTATGAAAGTCTACTaGAGAGTCCCACTGAGTATGGCGAAATTTGTAAATTTCGGCATC +
Preference number: 2 (lower is better)
Translates to: NPRERPEVTATMKVY*RVPLSMAKFVNFGI
Trigger: GATGCCGAAATTTACAAATTTCGCCATACTCAGTGGGACTCTCAAGTAGACTTTCATAGTTGCAGTCACTTCAGGTCTCTCCCTCGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR GCA 90 bp ATCTCAACAGGACCTGGAACGGTGGCTGGCCATGAATGCAAAATTGAAACCTCAAATTACCACTGTGCGTaGATCCCTAAATGCTATTGC +
Preference number: 2 (lower is better)
Translates to: ISTGPGTVAGHECKIETSNYHCA*IPKCYC
Trigger: GCAATAGCATTTAGGGATGCACGCACAGTGGTAATT...TGAGGTTTCAATTTTGCATTCATGGCCAGCCACCGTTCCAGGTCCTGTTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR GCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTGGATGTGATAAGCACTaGTGCACCTTTGGCCGTAAA +
Preference number: 2 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCGCDKH*CTFGRK
Trigger: TTTACGGCCAAAGGTGCAGCAGTGCTTATCACATCC...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR GCA 90 bp ATCTCAACAGGACCTGGAACGGTGGCTGGCCATGAATGCAAAATTGAAACCTCATCTTGTCTTTCTATATaGTTGTCCTGTCAGGCTCAG +
Preference number: 2 (lower is better)
Translates to: ISTGPGTVAGHECKIETSSCLSI*LSCQAQ
Trigger: CTGAGCCTGACAGGACAAGCATATAGAAAGACAAGA...TGAGGTTTCAATTTTGCATTCATGGCCAGCCACCGTTCCAGGTCCTGTTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR GCA 90 bp ATCTCAACAGGACCTGGAACGGTGGCTGGCCATGAATGCAAAATTGAAACCTCACTCCTACATTGCTGGTaGAAATGTAAAATGGTGCAG +
Preference number: 2 (lower is better)
Translates to: ISTGPGTVAGHECKIETSLLHCW*KCKMVQ
Trigger: CTGCACCATTTTACATTTGCACCAGCAATGTAGGAG...TGAGGTTTCAATTTTGCATTCATGGCCAGCCACCGTTCCAGGTCCTGTTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR CCA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCATTAAGCACCATTAAGTaGTTAGCCTTTCTCTCCAAT +
Preference number: 2 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPLSTIK*LAFLSN
Trigger: ATTGGAGAGAAAGGCTAACCACTTAATGGTGCTTAA...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR CCA 90 bp CAAGTAGAGAAGTTGTATGATCTTACTACACCACAGATAGTCATCATTCTACAGATTAGCTGGGCGTGGTaGCGGGTTCCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: QVEKLYDLTTPQIVIILQISWAW*RVPVVP
Trigger: TGGGACTACAGGAACCCGCCACCACGCCCAGCTAAT...CTGTAGAATGATGACTATCTGTGGTGTAGTAAGATCATACAACTTCTCTACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
3UTR-3UTR TCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGGTGTTCAAATGTGGATaGACAGATGCCTATATCTAT +
Preference number: 2 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEVFKCG*TDAYIY
Trigger: ATAGATATAGGCATCTGTTCATCCACATTTGAACAC...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR TCA 90 bp CAAGTAGAGAAGTTGTATGATCTTACTACACCACAGATAGTCATCATTCTACAGAGCTACTTGGGAGGCTaGGGCAGGAGAATGGTGTCA +
Preference number: 2 (lower is better)
Translates to: QVEKLYDLTTPQIVIILQSYLGG*GRRMVS
Trigger: TGACACCATTCTCCTGCCTCAGCCTCCCAAGTAGCT...CTGTAGAATGATGACTATCTGTGGTGTAGTAAGATCATACAACTTCTCTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
3UTR-3UTR GCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGATCCCTAAATGCTATTaGGATGTTTCCGGGTTAAAT +
Preference number: 2 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEIPKCY*DVSGLN
Trigger: ATTTAACCCGGAAACATCGCAATAGCATTTAGGGAT...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR GCA 90 bp AGAGCAAAGGCTCTGAAGAAAACAGCTCCATTCACGAGAGAAAGCAGTACTAATAGGTGTCTGTTCTTGTaGTTGCATCCTAAGGGAACC +
Preference number: 2 (lower is better)
Translates to: RAKALKKTAPFTRESSTNRCLFL*LHPKGT
Trigger: GGTTCCCTTAGGATGCAAGCACAAGAACAGACACCT...ATTAGTACTGCTTTCTCTCGTGAATGGAGCTGTTTTCTTCAGAGCCTTTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR CCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACATTAAGCACCATTAAGTaGTTAGCCTTTCTCTCCAAT +
Preference number: 2 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTLSTIK*LAFLSN
Trigger: ATTGGAGAGAAAGGCTAACCACTTAATGGTGCTTAA...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR CCA 90 bp ATTCAAAGAGCTACTCTAAAGCATTTCCAGGTGGAACTTAGTACCTCTGCTCTATACAAAAAGATTAGCTaGGCGTGGTGGCGGGTTCCT +
Preference number: 2 (lower is better)
Translates to: IQRATLKHFQVELSTSALYKKIS*AWWRVP
Trigger: AGGAACCCGCCACCACGCCCAGCTAATCTTTTTGTA...TAGAGCAGAGGTACTAAGTTCCACCTGGAAATGCTTTAGAGTAGCTCTTTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609853.1
3UTR-3UTR TCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTCAACTTCTCCTGCTCTaGGATTCGCAAGAGTCAGAC +
Preference number: 2 (lower is better)
Translates to: YIHLFLSFHLTCINSPVIQLLLL*DSQESD
Trigger: GTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTG...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR CAA 90 bp ATGACCATTCGGATTACACGCATCCAGTTGTCTTGCCAGTTTCCCTaGGTAATTAGTTCTCAATCACCTTTTCTTCATACCTTCTTCCCT +
Preference number: 2 (lower is better)
Translates to: MTIRITRIQLSCQFP*VISSQSPFLHTFFP
Trigger: AGGGAAGAAGGTATGAAGAAAAGGTGATTGAGAACTAATTACCAAGGGAAACTGGCAAGACAACTGGATGCGTGTAATCCGAATGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR GCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTCAGACAGGAGAGATGTaGGAGTTGTTTACAATAGTA +
Preference number: 2 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCQTGEM*ELFTIV
Trigger: TACTATTGTAAACAACTCGCACATCTCTCCTGTCTG...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR GCA 90 bp GGTGCAAATGTAAAATGGTGCAGCTTCTTTGGAAAACAGTCTGGCAATTTCCTACGCATCCAGTTGTCTTaGCAGTTTCCCTTGGTAATT +
Preference number: 2 (lower is better)
Translates to: GANVKWCSFFGKQSGNFLRIQLS*QFPLVI
Trigger: AATTACCAAGGGAAACTGGCAAGACAACTGGATGCG...TAGGAAATTGCCAGACTGTTTTCCAAAGAAGCTGCACCATTTTACATTTGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR CCA 90 bp ACACAGCCATACAATGGAACAGCATTCAGCCCAGCAATAAAAAGGAAAGCAATTAATGGATTGTATAAATaGCCACCCTGGGACCTTCGT +
Preference number: 2 (lower is better)
Translates to: TQPYNGTAFSPAIKRKAINGLYK*PPWDLR
Trigger: ACGAAGGTCCCAGGGTGGCCATTTATACAATCCATT...AATTGCTTTCCTTTTTATTGCTGGGCTGAATGCTGTTCCATTGTATGGCTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CAA 90 bp GTTAGCTGTTGTCTCATTATGACCATTCGGATTACACGCATCCAGTaGTCTTGCCAGTTTCCCTTGGTAATTAGTTCTCAATCACCTTTT +
Preference number: 2 (lower is better)
Translates to: VSCCLIMTIRITRIQ*SCQFPLVISSQSPF
Trigger: AAAAGGTGATTGAGAACTAATTACCAAGGGAAACTGGCAAGACAACTGGATGCGTGTAATCCGAATGGTCATAATGAGACAACAGCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR TCA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGGCATCTACGTGGGGCTaGAGACATTTCCCTGTATTC +
Preference number: 2 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLASTWG*RHFPVF
Trigger: GAATACAGGGAAATGTCTTCAGCCCCACGTAGATGC...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR TCA 90 bp ATTCAAAGAGCTACTCTAAAGCATTTCCAGGTGGAACTTAGTACCTCTGCTCTATCCTGGCTAACATGGTaGAACCATGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: IQRATLKHFQVELSTSALSWLTW*NHVSTK
Trigger: TTTAGTAGAGACATGGTTTCACCATGTTAGCCAGGA...TAGAGCAGAGGTACTAAGTTCCACCTGGAAATGCTTTAGAGTAGCTCTTTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
3UTR-3UTR TCA 90 bp ATTCAAAGAGCTACTCTAAAGCATTTCCAGGTGGAACTTAGTACCTCTGCTCTATATGCGATACACACTTaGGTATACCCAAGAAGACCA +
Preference number: 2 (lower is better)
Translates to: IQRATLKHFQVELSTSALYAIHT*VYPRRP
Trigger: TGGTCTTCTTGGGTATACTCAAGTGTGTATCGCATA...TAGAGCAGAGGTACTAAGTTCCACCTGGAAATGCTTTAGAGTAGCTCTTTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
3UTR-3UTR GCA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGGAGGGATCAGTAAGCTaGAACTTCTCCTGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLEGSVS*NFSCSE
Trigger: CTCAGAGCAGGAGAAGTTGCAGCTTACTGATCCCTC...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR GCA 90 bp TGCCTTAGTTTTCTCGTCTGTAAACTGGCAATTATAGTAGTACATACTTCGTTAAATGGCCTGATGAGGTaGAGCAATATCCGTCGACTA +
Preference number: 2 (lower is better)
Translates to: CLSFLVCKLAIIVVHTSLNGLMR*SNIRRL
Trigger: TAGTCGACGGATATTGCTGCACCTCATCAGGCCATT...TAACGAAGTATGTACTACTATAATTGCCAGTTTACAGACGAGAAAACTAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CAA 90 bp CACCTGACCTGCATCAACAGCCCAGTTATTTCACCAGAATTTTGTTaGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGTTT +
Preference number: 2 (lower is better)
Translates to: HLTCINSPVISPEFC*RFNVVFSFNTLHLF
Trigger: AAACAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR CAA 90 bp CAGAATTATTCACTTTTCTCCAAAATGATTAATGAATTGCAGTCCTaGCCCTCAAGAAGCTCACAGCTTAATAAAGGGTACGACCCTCTA +
Preference number: 2 (lower is better)
Translates to: QNYSLFSKMINELQS*PSRSSQLNKGYDPL
Trigger: TAGAGGGTCGTACCCTTTATTAAGCTGTGAGCTTCTTGAGGGCAAGGACTGCAATTCATTAATCATTTTGGAGAAAAGTGAATAATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609853.1
3UTR-3UTR GCA 90 bp ACACAGCCATACAATGGAACAGCATTCAGCCCAGCAATAAAAAGGAAAGCAATTAATACACCATGTACATaGAGTTACAGGGCAAAATCA +
Preference number: 2 (lower is better)
Translates to: TQPYNGTAFSPAIKRKAINTPCT*SYRAKS
Trigger: TGATTTTGCCCTGTAACTGCATGTACATGGTGTATT...AATTGCTTTCCTTTTTATTGCTGGGCTGAATGCTGTTCCATTGTATGGCTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR CCA 90 bp ACACAGCCATACAATGGAACAGCATTCAGCCCAGCAATAAAAAGGAAAGCAATTTTAAGCACCATTAAGTaGTTAGCCTTTCTCTCCAAT +
Preference number: 2 (lower is better)
Translates to: TQPYNGTAFSPAIKRKAILSTIK*LAFLSN
Trigger: ATTGGAGAGAAAGGCTAACCACTTAATGGTGCTTAA...AATTGCTTTCCTTTTTATTGCTGGGCTGAATGCTGTTCCATTGTATGGCTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR GCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTATCCCTAAATGCTATTaGGATGTTTCCGGGTTAAAT +
Preference number: 2 (lower is better)
Translates to: YIHLFLSFHLTCINSPVIIPKCY*DVSGLN
Trigger: ATTTAACCCGGAAACATCGCAATAGCATTTAGGGAT...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR GCA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGCATACTCTCTTGGAGTaGCTAAATCTTTGTCAGTGT +
Preference number: 2 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLHTLLE*LNLCQC
Trigger: ACACTGACAAAGATTTAGGCACTCCAAGAGAGTATG...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR GCA 72 bp TTCGTGTCTGCGGCTCAGCTGTGCTGTTGTCCCAGGTaGCCCACCTTGGCTGGCATATCTCCCAGGCCAGCA +
Preference number: 3 (lower is better)
Translates to: FVSAAQLCCCPR*PTLAGISPRPA
Trigger: TGCTGGCCTGGGAGATATGCCAGCCAAGGTGGGGCACCTGGGACAACAGCACAGCTGAGCCGCAGACACGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 72 bp AGTCTGACTCCCATCCCAGGGCACTCAAACATCAGCTaGGACTGCCCCTGCGAGTCCTTCGGAGGCTCCTTT +
Preference number: 3 (lower is better)
Translates to: SLTPIPGHSNIS*DCPCESFGGSF
Trigger: AAAGGAGCCTCCGAAGGACTCGCAGGGGCAGTCGCAGCTGATGTTTGAGTGCCCTGGGATGGGAGTCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 72 bp AAGTGGACTTTCCAGGCCTCCCTCACTGGGCCCTCCTaGTGCATTTCCAGTGCAGATGCTGCCTCCTTCCTG +
Preference number: 3 (lower is better)
Translates to: KWTFQASLTGPS*CISSADAASFL
Trigger: CAGGAAGGAGGCAGCATCTGCACTGGAAATGCAGCAGGAGGGCCCAGTGAGGGAGGCCTGGAAAGTCCACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR CAA 90 bp AGGGCACTCAAACATCAGCTGCGACTGCCCCTGCGAGTCCTTCGGAGGCTCCTTTGGGGTTTCACCATGTaGGCCAGGATGGTCTCGATT +
Preference number: 3 (lower is better)
Translates to: RALKHQLRLPLRVLRRLLWGFTM*ARMVSI
Trigger: AATCGAGACCATCCTGGCCAACATGGTGAAACCCCA...AAGGAGCCTCCGAAGGACTCGCAGGGGCAGTCGCAGCTGATGTTTGAGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 72 bp TCCCAGGCCAGCACTCTTGTGACTCTGCCCCCTACATaGTGGGGAGTCTCTATCTCTCTCTGGGACAGCCAA +
Preference number: 3 (lower is better)
Translates to: SQASTLVTLPPT*WGVSISLWDSQ
Trigger: TTGGCTGTCCCAGAGAGAGATAGAGACTCCCCAGCATGTAGGGGGCAGAGTCACAAGAGTGCTGGCCTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CCA 72 bp CAGGCCAGCACTCTTGTGACTCTGCCCCCTACATGCTaGGGAGTCTCTATCTCTCTCTGGGACAGCCAACCA +
Preference number: 3 (lower is better)
Translates to: QASTLVTLPPTC*GVSISLWDSQP
Trigger: TGGTTGGCTGTCCCAGAGAGAGATAGAGACTCCCCAGCATGTAGGGGGCAGAGTCACAAGAGTGCTGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CCA 72 bp TGTCAAGTCCAAGTGGACTTTCCAGGCCTCCCTCACTaGGCCCTCCTGCTGCATTTCCAGTGCAGATGCTGC +
Preference number: 3 (lower is better)
Translates to: CQVQVDFPGLPH*ALLLHFQCRCC
Trigger: GCAGCATCTGCACTGGAAATGCAGCAGGAGGGCCCAGTGAGGGAGGCCTGGAAAGTCCACTTGGACTTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR CAA 90 bp CCTTGGCTGGCATATCTCCCAGGCCAGCACTCTTGTGACTCTGCCCCCTACATGACCAGGTGTCTGTTCTaGTGCTTGCATCCTAAGGGA +
Preference number: 3 (lower is better)
Translates to: PWLAYLPGQHSCDSAPYMTRCLF*CLHPKG
Trigger: TCCCTTAGGATGCAAGCACAAGAACAGACACCTGGT...CATGTAGGGGGCAGAGTCACAAGAGTGCTGGCCTGGGAGATATGCCAGCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 72 bp GGTTTCAGCACCATGCTGACCAGGTGTCTGTTCTTGTaGTTGCATCCTAAGGGAACCCGAGGGAGAGACCTG +
Preference number: 3 (lower is better)
Translates to: GFSTMLTRCLFL*LHPKGTRGRDL
Trigger: CAGGTCTCTCCCTCGGGTTCCCTTAGGATGCAAGCACAAGAACAGACACCTGGTCAGCATGGTGCTGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 72 bp GCTGCTCTTGCCATCGGTCCCCTCTGCAGAATGCCCTaGTCTCTCCCCCTCTTGTCTTTCTATATGCTTGTC +
Preference number: 3 (lower is better)
Translates to: AALAIGPLCRMP*SLPLLSFYMLV
Trigger: GACAAGCATATAGAAAGACAAGAGGGGGAGAGAGCAGGGCATTCTGCAGAGGGGACCGATGGCAAGAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 72 bp ATGCAGCTGCTCTTGCCATCGGTCCCCTCTGCAGAATaGCCTGCTCTCTCCCCCTCTTGTCTTTCTATATGC +
Preference number: 3 (lower is better)
Translates to: MQLLLPSVPSAE*PALSPSCLSIC
Trigger: GCATATAGAAAGACAAGAGGGGGAGAGAGCAGGGCATTCTGCAGAGGGGACCGATGGCAAGAGCAGCTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 72 bp TGGCAAATTTCCTCACACATCCCATGCAGCTGCTCTTaGCATCGGTCCCCTCTGCAGAATGCCCTGCTCTCT +
Preference number: 3 (lower is better)
Translates to: WQISSHIPCSCS*HRSPLQNALLS
Trigger: AGAGAGCAGGGCATTCTGCAGAGGGGACCGATGGCAAGAGCAGCTGCATGGGATGTGTGAGGAAATTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 72 bp TCACAGTGGCAAATTTCCTCACACATCCCATGCAGCTaGTCTTGCCATCGGTCCCCTCTGCAGAATGCCCTG +
Preference number: 3 (lower is better)
Translates to: SQWQISSHIPCS*SCHRSPLQNAL
Trigger: CAGGGCATTCTGCAGAGGGGACCGATGGCAAGAGCAGCTGCATGGGATGTGTGAGGAAATTTGCCACTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CCA 72 bp TCTCCTCAGATTGCCCTGCCTGTGCCTCCTCCCTCCTaGGTCACATGTGACCTTACTGTGTCTTTACCTCTG +
Preference number: 3 (lower is better)
Translates to: SPQIALPVPPPS*VTCDLTVSLPL
Trigger: CAGAGGTAAAGACACAGTAAGGTCACATGTGACCCAGGAGGGAGGAGGCACAGGCAGGGCAATCTGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 72 bp CCTTCGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATaGCCACACCTTACAGCAGAGCAAAGTAAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: PSEAPFPLVPLK*PHLTAEQSKAQ
Trigger: CTGGGCCTTACTTTGCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CCA 72 bp CCCAGGCCTGTTCCCTCACATTTCACTTCCACAGCATaGAGGGACCACACCAGGTCAAAACCAACTACAGGA +
Preference number: 3 (lower is better)
Translates to: PRPVPSHFTSTA*RDHTRSKPTTG
Trigger: TCCTGTAGTTGGTTTTGACCTGGTGTGGTCCCTCCATGCTGTGGAAGTGAAATGTGAGGGAACAGGCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR TCA 72 bp AGGAACATGGAAATCTTAGGGAGACTCTCCCTCTGTTaGGGAGCACTGCAAGCAGCACCTGAGTGGAAGGAC +
Preference number: 3 (lower is better)
Translates to: RNMEILGRLSLC*GALQAAPEWKD
Trigger: GTCCTTCCACTCAGGTGCTGCTTGCAGTGCTCCTCAACAGAGGGAGAGTCTCCCTAAGATTTCCATGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR TCA 72 bp CTGGCCATGAATGCAAAATTGAAACCTCAGCCAGTCTaGCTCCCATCCCAGGGCACTCAAACATCAGCTGCG +
Preference number: 3 (lower is better)
Translates to: LAMNAKLKPQPV*LPSQGTQTSAA
Trigger: CGCAGCTGATGTTTGAGTGCCCTGGGATGGGAGTCAGACTGGCTGAGGTTTCAATTTTGCATTCATGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CCA 72 bp ATCCAGCACAATGCAGGTGCTCGACAGAATGTTAGCTaGCCAAATGAAGGACCAGACAGGCAGCGCTTTCTC +
Preference number: 3 (lower is better)
Translates to: IQHNAGARQNVS*PNEGPDRQRFL
Trigger: GAGAAAGCGCTGCCTGTCTGGTCCTTCATTTGGCCAGCTAACATTCTGTCGAGCACCTGCATTGTGCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR CAA 90 bp ATCTCAACAGGACCTGGAACGGTGGCTGGCCATGAATGCAAAATTGAAACCTCAAGACAGGAGAATCGCTaGAACTTGGGAGGCAGAGGC +
Preference number: 3 (lower is better)
Translates to: ISTGPGTVAGHECKIETSRQENR*NLGGRG
Trigger: GCCTCTGCCTCCCAAGTTCAAGCGATTCTCCTGTCT...TGAGGTTTCAATTTTGCATTCATGGCCAGCCACCGTTCCAGGTCCTGTTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 72 bp GTCCTCCGTGAAGAGATCCTACTCGTAGACATGGCATaGTTTTCTCGCACCATGACAGTGAAGAGAAAGGGG +
Preference number: 3 (lower is better)
Translates to: VLREEILLVDMA*FSRTMTVKRKG
Trigger: CCCCTTTCTCTTCACTGTCATGGTGCGAGAAAAGCATGCCATGTCTACGAGTAGGATCTCTTCACGGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 72 bp TACACATCACAGTGGCAAATTTCCTCACACATCCCATaGAGCTGCTCTTGCCATCGGTCCCCTCTGCAGAAT +
Preference number: 3 (lower is better)
Translates to: YTSQWQISSHIP*SCSCHRSPLQN
Trigger: ATTCTGCAGAGGGGACCGATGGCAAGAGCAGCTGCATGGGATGTGTGAGGAAATTTGCCACTGTGATGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 72 bp ATCTCAACAGGACCTGGAACGGTGGCTGGCCATGAATaGAAAATTGAAACCTCAGCCAGTCTGACTCCCATC +
Preference number: 3 (lower is better)
Translates to: ISTGPGTVAGHE*KIETSASLTPI
Trigger: GATGGGAGTCAGACTGGCTGAGGTTTCAATTTTGCATTCATGGCCAGCCACCGTTCCAGGTCCTGTTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 72 bp TCATCCAAACCTTTGAGCTGCATCACTTCCCACTTGTaGCTGTGGCCACTGCAGTCTGATTCTGACTCTAGG +
Preference number: 3 (lower is better)
Translates to: SSKPLSCITSHL*LWPLQSDSDSR
Trigger: CCTAGAGTCAGAATCAGACTGCAGTGGCCACAGGCACAAGTGGGAAGTGATGCAGCTCAAAGGTTTGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CCA 72 bp AAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTaGGACCTTCGTGGGGAGAAGCCATGTGAGTCGAGG +
Preference number: 3 (lower is better)
Translates to: KEDRNGLYKWPP*DLRGEKPCESR
Trigger: CCTCGACTCACATGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR CAA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCCGAAGTCATACTCTCTaGGAGTGCCTAAATCTTTGT +
Preference number: 3 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSRSHTL*ECLNLC
Trigger: ACAAAGATTTAGGCACTCCAAGAGAGTATGACTTCG...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR CAA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCGGAATATTTCCTAACTaGCCCAACATCCGAGTTTCT +
Preference number: 3 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSGIFPN*PNIRVS
Trigger: AGAAACTCGGATGTTGGGCAAGTTAGGAAATATTCC...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 72 bp GTGAGCACTGAGGGATCAGTAAGCTGCAACTTCTCCTaGTCTGAGATTCGCAAGAGTCAGACCAGAACAAAG +
Preference number: 3 (lower is better)
Translates to: VSTEGSVSCNFS*SEIRKSQTRTK
Trigger: CTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCAGCTTACTGATCCCTCAGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR GCA 72 bp CACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTaGAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAG +
Preference number: 3 (lower is better)
Translates to: HMSTVSTEGSVS*NFSCSEIRKSQ
Trigger: CTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR GCA 72 bp GAATGCCCTGCTCTCTCCCCCTCTTGTCTTTCTATATaGTTGTCCTGTCAGGCTCAGCTGAGACAAATCCTT +
Preference number: 3 (lower is better)
Translates to: ECPALSPSCLSI*LSCQAQLRQIL
Trigger: AAGGATTTGTCTCAGCTGAGCCTGACAGGACAAGCATATAGAAAGACAAGAGGGGGAGAGAGCAGGGCATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 72 bp CACCAGGTCAAAACCAACTACAGGATCAAGTTCAACTaGACACAACTCCCTCCACCATCCTGTCTCTGTGGA +
Preference number: 3 (lower is better)
Translates to: HQVKTNYRIKFN*TQLPPPSCLCG
Trigger: TCCACAGAGACAGGATGGTGGAGGGAGTTGTGTGCAGTTGAACTTGATCCTGTAGTTGGTTTTGACCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR TCA 72 bp TGTGCTTGCATCCTAAGGGAACCCGAGGGAGAGACCTaGAGTGACTGCAACTATGAAAGTCTACTTGAGAGT +
Preference number: 3 (lower is better)
Translates to: CACILREPEGET*SDCNYESLLES
Trigger: ACTCTCAAGTAGACTTTCATAGTTGCAGTCACTTCAGGTCTCTCCCTCGGGTTCCCTTAGGATGCAAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR TCA 72 bp ATCTCCAATCCAGAAGATGAAGCTGCAGGTCCTCCGTaGAGAGATCCTACTCGTAGACATGGCATGCTTTTC +
Preference number: 3 (lower is better)
Translates to: ISNPEDEAAGPP*RDPTRRHGMLF
Trigger: GAAAAGCATGCCATGTCTACGAGTAGGATCTCTTCACGGAGGACCTGCAGCTTCATCTTCTGGATTGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR CAA 90 bp ATCTCAACAGGACCTGGAACGGTGGCTGGCCATGAATGCAAAATTGAAACCTCAATTACACGCATCCAGTaGTCTTGCCAGTTTCCCTTG +
Preference number: 3 (lower is better)
Translates to: ISTGPGTVAGHECKIETSITRIQ*SCQFPL
Trigger: CAAGGGAAACTGGCAAGACAACTGGATGCGTGTAAT...TGAGGTTTCAATTTTGCATTCATGGCCAGCCACCGTTCCAGGTCCTGTTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR TCA 72 bp ACCAGACAGGCAGCGCTTTCTCAGCTCCTCATATACTaGAAATGCTCACAGACTTCCAAACAGCTTAGGACT +
Preference number: 3 (lower is better)
Translates to: TRQAALSQLLIY*KCSQTSKQLRT
Trigger: AGTCCTAAGCTGTTTGGAAGTCTGTGAGCATTTTCAGTATATGAGGAGCTGAGAAAGCGCTGCCTGTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR TCA 72 bp GCTAACATGTGGCACACTCAGACTACAATGCAGACTTaGCAACCTCCAGTCCACTCTACCAGACTGACAAAT +
Preference number: 3 (lower is better)
Translates to: ANMWHTQTTMQT*QPPVHSTRLTN
Trigger: ATTTGTCAGTCTGGTAGAGTGGACTGGAGGTTGTCAAGTCTGCATTGTAGTCTGAGTGTGCCACATGTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CCA 72 bp ACATTCCATAAAGAGGACAGAAATGGATTGTATAAATaGCCACCCTGGGACCTTCGTGGGGAGAAGCCATGT +
Preference number: 3 (lower is better)
Translates to: TFHKEDRNGLYK*PPWDLRGEKPC
Trigger: ACATGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR CAA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCAGAGGACAGAAATGGATaGTATAAATGGCCACCCTGG +
Preference number: 3 (lower is better)
Translates to: HLFLSFHLTCINSPVISPEDRNG*YKWPPW
Trigger: CCAGGGTGGCCATTTATACAATCCATTTCTGTCCTC...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR CAA 90 bp AGAGCAAAGGCTCTGAAGAAAACAGCTCCATTCACGAGAGAAAGCAGTACTAATTGTCTGTTCTTGTGCTaGCATCCTAAGGGAACCCGA +
Preference number: 3 (lower is better)
Translates to: RAKALKKTAPFTRESSTNCLFLC*HPKGTR
Trigger: TCGGGTTCCCTTAGGATGCAAGCACAAGAACAGACA...ATTAGTACTGCTTTCTCTCGTGAATGGAGCTGTTTTCTTCAGAGCCTTTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR TCA 72 bp CACAGCAAGCATTCAGTGTTAGCTGTTGTCTCATTATaGCCATTCGGATTACACGCATCCAGTTGTCTTGCC +
Preference number: 3 (lower is better)
Translates to: HSKHSVLAVVSL*PFGLHASSCLA
Trigger: GGCAAGACAACTGGATGCGTGTAATCCGAATGGTCATAATGAGACAACAGCTAACACTGAATGCTTGCTGTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR TCA 72 bp TGCAGACTTGACAACCTCCAGTCCACTCTACCAGACTaGCAAATGCACAGGGATGTTGATGTCTTTTCAAAG +
Preference number: 3 (lower is better)
Translates to: CRLDNLQSTLPD*QMHRDVDVFSK
Trigger: CTTTGAAAAGACATCAACATCCCTGTGCATTTGTCAGTCTGGTAGAGTGGACTGGAGGTTGTCAAGTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR CAA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAAGAGGACAGAAATGGATaGTATAAATGGCCACCCTGG +
Preference number: 3 (lower is better)
Translates to: KPHLATGRNINVGFSTIQEDRNG*YKWPPW
Trigger: CCAGGGTGGCCATTTATACAATCCATTTCTGTCCTC...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR TCA 72 bp CAAAACATAACCAAGAATAATCTCCAATCCAGAAGATaGAGCTGCAGGTCCTCCGTGAAGAGATCCTACTCG +
Preference number: 3 (lower is better)
Translates to: QNITKNNLQSRR*SCRSSVKRSYS
Trigger: CGAGTAGGATCTCTTCACGGAGGACCTGCAGCTTCATCTTCTGGATTGGAGATTATTCTTGGTTATGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR TCA 72 bp AGATGCCACTACAGGGAGGAACTTCAGAAACATTACTaGGTGAAAGAAGCCAGACACAAAAGACCATGTCTG +
Preference number: 3 (lower is better)
Translates to: RCHYREELQKHY*VKEARHKRPCL
Trigger: CAGACATGGTCTTTTGTGTCTGGCTTCTTTCACTCAGTAATGTTTCTGAAGTTCCTCCCTGTAGTGGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 72 bp ACCAATCTCTTAGTATGTGGATGTGATAAGCACTGCTaGACCTTTGGCCGTAAACTTATTTTAAGTGCCCCG +
Preference number: 3 (lower is better)
Translates to: TNLLVCGCDKHC*TFGRKLILSAP
Trigger: CGGGGCACTTAAAATAAGTTTACGGCCAAAGGTGCAGCAGTGCTTATCACATCCACATACTAAGAGATTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR CAA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCAGGAGTGCCTAAATCTTaGTCAGTGTTTTGGTATCTG +
Preference number: 3 (lower is better)
Translates to: HLFLSFHLTCINSPVISPGVPKS*SVFWYL
Trigger: CAGATACCAAAACACTGACAAAGATTTAGGCACTCC...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR CAA 90 bp ACACAGCCATACAATGGAACAGCATTCAGCCCAGCAATAAAAAGGAAAGCAATTTGTCTTTCTATATGCTaGTCCTGTCAGGCTCAGCTG +
Preference number: 3 (lower is better)
Translates to: TQPYNGTAFSPAIKRKAICLSIC*SCQAQL
Trigger: CAGCTGAGCCTGACAGGACAAGCATATAGAAAGACA...AATTGCTTTCCTTTTTATTGCTGGGCTGAATGCTGTTCCATTGTATGGCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 72 bp GAACCCTCCTACATTGCTGGTGCAAATGTAAAATGGTaGAGCTTCTTTGGAAAACAGTCTGGCAATTTCCTA +
Preference number: 3 (lower is better)
Translates to: EPSYIAGANVKW*SFFGKQSGNFL
Trigger: TAGGAAATTGCCAGACTGTTTTCCAAAGAAGCTGCACCATTTTACATTTGCACCAGCAATGTAGGAGGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 72 bp AAGACCAATCTCTTAGTATGTGGATGTGATAAGCACTaGTGCACCTTTGGCCGTAAACTTATTTTAAGTGCC +
Preference number: 3 (lower is better)
Translates to: KTNLLVCGCDKH*CTFGRKLILSA
Trigger: GGCACTTAAAATAAGTTTACGGCCAAAGGTGCAGCAGTGCTTATCACATCCACATACTAAGAGATTGGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR-3UTR CAA 90 bp ATTCAAAGAGCTACTCTAAAGCATTTCCAGGTGGAACTTAGTACCTCTGCTCTAATATGCGATACACACTaGAGTATACCCAAGAAGACC +
Preference number: 3 (lower is better)
Translates to: IQRATLKHFQVELSTSALICDTH*SIPKKT
Trigger: GGTCTTCTTGGGTATACTCAAGTGTGTATCGCATAT...TAGAGCAGAGGTACTAAGTTCCACCTGGAAATGCTTTAGAGTAGCTCTTTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
3UTR TCA 72 bp ATTCCATTTATAGGAAATGTTCAGAAATGGCAAACCTaGAGGACAGAAAGCCGATCAGTTGCTGTGTGGAAA +
Preference number: 3 (lower is better)
Translates to: IPFIGNVQKWQT*RTESRSVAVWK
Trigger: TTTCCACACAGCAACTGATCGGCTTTCTGTCCTTCAGGTTTGCCATTTCTGAACATTTCCTATAAATGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR GCA 72 bp TTAAATCGGTTAATACCAGTAAAACGTCTAGCAGAGTaGCAAACACACAGCAAGCATTCAGTGTTAGCTGTT +
Preference number: 3 (lower is better)
Translates to: LNRLIPVKRLAE*QTHSKHSVLAV
Trigger: AACAGCTAACACTGAATGCTTGCTGTGTGTTTGGCACTCTGCTAGACGTTTTACTGGTATTAACCGATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR CAA 90 bp ATTCAAAGAGCTACTCTAAAGCATTTCCAGGTGGAACTTAGTACCTCTGCTCTAGTACCTTCAATTACATaGCAGGACCACATATACATT +
Preference number: 3 (lower is better)
Translates to: IQRATLKHFQVELSTSALVPSIT*QDHIYI
Trigger: AATGTATATGTGGTCCTGCAATGTAATTGAAGGTAC...TAGAGCAGAGGTACTAAGTTCCACCTGGAAATGCTTTAGAGTAGCTCTTTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
3UTR TCA 72 bp AATATGCCTGTAATAGCCTGGGCATATCTCCAACACTaGTTGACAGATTACAAAACACACTGTCAGATTAGA +
Preference number: 3 (lower is better)
Translates to: NMPVIAWAYLQH*LTDYKTHCQIR
Trigger: TCTAATCTGACAGTGTGTTTTGTAATCTGTCAATCAGTGTTGGAGATATGCCCAGGCTATTACAGGCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR CAA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGGGAGTGCCTAAATCTTaGTCAGTGTTTTGGTATCTG +
Preference number: 3 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLGVPKS*SVFWYL
Trigger: CAGATACCAAAACACTGACAAAGATTTAGGCACTCC...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR TCA 72 bp AAATGTTCAGGTTTTGGAGAAAAACATAACCGGAACTaGGTAATAAATTACCACTGTGCGTGCATCCCTAAA +
Preference number: 3 (lower is better)
Translates to: KCSGFGEKHNRN*VINYHCACIPK
Trigger: TTTAGGGATGCACGCACAGTGGTAATTTATTACTCAGTTCCGGTTATGTTTTTCTCCAAAACCTGAACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR GCA 72 bp CTAAAGAATTATAGTGACCCAGCAAGGGTCAAGATCTaGTCTTATATTAGTTCCTCTGTCATTTTCTCATGT +
Preference number: 3 (lower is better)
Translates to: LKNYSDPARVKI*SYISSSVIFSC
Trigger: ACATGAGAAAATGACAGAGGAACTAATATAAGAGCAGATCTTGACCCTTGCTGGGTCACTATAATTCTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR-3UTR CAA 90 bp TGCCTTAGTTTTCTCGTCTGTAAACTGGCAATTATAGTAGTACATACTTCGTTAAAACAGCTTAGGACTTaGTCTAGGAACATGGAAATC +
Preference number: 3 (lower is better)
Translates to: CLSFLVCKLAIIVVHTSLKQLRT*SRNMEI
Trigger: GATTTCCATGTTCCTAGACAAAGTCCTAAGCTGTTT...TAACGAAGTATGTACTACTATAATTGCCAGTTTACAGACGAGAAAACTAAGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR TCA 72 bp ATTAAGCAACTCACAGTAACAAGTAGAGAAGTTGTATaGTCTTACTACACCACAGATAGTCATCATTCTACA +
Preference number: 3 (lower is better)
Translates to: IKQLTVTSREVV*SYYTTDSHHST
Trigger: TGTAGAATGATGACTATCTGTGGTGTAGTAAGATCATACAACTTCTCTACTTGTTACTGTGAGTTGCTTAAT
35% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
3UTR CCA 72 bp CATGTTTATAAATCGGAAGACCCAATACTGTTAAGATaGCAGTTCTTCCTTGACTCATCTATAGATTCAAAA +
Preference number: 3 (lower is better)
Translates to: HVYKSEDPILLR*QFFLDSSIDSK
Trigger: TTTTGAATCTATAGATGAGTCAAGGAAGAACTGCCATCTTAACAGTATTGGGTCTTCCGATTTATAAACATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp CCTTGGCTGGCATATCTCCCAGGCCAGCACTCTTGTGACTCTGCCCCCTACATGCCTTCCTGGAGCCCCTaGTCCTCCAGCCATGGCACA +
Preference number: 4 (lower is better)
Translates to: PWLAYLPGQHSCDSAPYMPSWSP*SSSHGT
Trigger: TGTGCCATGGCTGGAGGAGCAGGGGCTCCAGGAAGG...CATGTAGGGGGCAGAGTCACAAGAGTGCTGGCCTGGGAGATATGCCAGCCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCTGCTCGTGCCTCCTGTaGGGCGCCCCGCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCCSCLL*GAPLSL
Trigger: GAGGGAGAGCGGGGCGCCCCACAGGAGGCACGAGCA...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACACGGGCGTCCCGGTCCTaGTCTGGGGGTGCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTRASRS*SGGAGS
Trigger: ACTCCCCGCACCCCCAGAGCAGGACCGGGACGCCCG...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGTGCTCGTGCCTCCTGTaGGGCGCCCCGCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTECSCLL*GAPLSL
Trigger: GAGGGAGAGCGGGGCGCCCCACAGGAGGCACGAGCA...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGCTTTGGCCGCACGTTTaGCACCCGCACCTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWLWPHV*HPHLGR
Trigger: CCTGCCGAGGTGCGGGTGTCAAACGTGCGGCCAAAG...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp CCTTGGCTGGCATATCTCCCAGGCCAGCACTCTTGTGACTCTGCCCCCTACATGATGGTCTCGATTTCCTaGCCTCGTGATCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: PWLAYLPGQHSCDSAPYMMVSIS*PRDPPT
Trigger: GGTGGGCGGATCACGAGGTCAGGAAATCGAGACCAT...CATGTAGGGGGCAGAGTCACAAGAGTGCTGGCCTGGGAGATATGCCAGCCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCACCTGGGACGGTAACTaGGAGCGCGGGGTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSTWDGN*ERGVRC
Trigger: GCAGCGCACCCCGCGCTCGCAGTTACCGTCCCAGGT...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp AGGGCACTCAAACATCAGCTGCGACTGCCCCTGCGAGTCCTTCGGAGGCTCCTTACTGGGCCCTCCTGCTaGATTTCCAGTGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: RALKHQLRLPLRVLRRLLTGPSC*ISSADA
Trigger: AGCATCTGCACTGGAAATGCAGCAGGAGGGCCCAGT...AAGGAGCCTCCGAAGGACTCGCAGGGGCAGTCGCAGCTGATGTTTGAGTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCAGGCAGAGGCTGCAGTaGGCTGAGATCTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSRQRLQ*AEISPL
Trigger: CAGTGGGGAGATCTCAGCTCACTGCAGCCTCTGCCT...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp CCTTGGCTGGCATATCTCCCAGGCCAGCACTCTTGTGACTCTGCCCCCTACATGCTGCCGTCTTCCGTTTaGTGCCGTAACTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PWLAYLPGQHSCDSAPYMLPSSV*CRNCQQ
Trigger: CTGCTGACAGTTACGGCATCAAACGGAAGACGGCAG...CATGTAGGGGGCAGAGTCACAAGAGTGCTGGCCTGGGAGATATGCCAGCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACAACCTGGGACGGTAACTaGGAGCGCGGGGTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTTWDGN*ERGVRC
Trigger: GCAGCGCACCCCGCGCTCGCAGTTACCGTCCCAGGT...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCGGCGCGACACCTCCTaGCGCCGCTATGGAAACGGC +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCERRDTS*RRYGNG
Trigger: GCCGTTTCCATAGCGGCGGCAGGAGGTGTCGCGCCG...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGCGGGCGTCCCGGTCCTaGTCTGGGGGTGCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGRASRS*SGGAGS
Trigger: ACTCCCCGCACCCCCAGAGCAGGACCGGGACGCCCG...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGAGCGCGGGGTGCGCTaGTCGACCTTTGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTEERGVR*STFAFH
Trigger: ATGGAAGGCAAAGGTCGAGCAGCGCACCCCGCGCTC...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCGAGCGCGGGGTGCGCTaGTCGACCTTTGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSERGVR*STFAFH
Trigger: ATGGAAGGCAAAGGTCGAGCAGCGCACCCCGCGCTC...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp AGGGCACTCAAACATCAGCTGCGACTGCCCCTGCGAGTCCTTCGGAGGCTCCTTACTATCTACAGAAACTaGAGGGAGGCCATGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RALKHQLRLPLRVLRRLLTIYRN*REAMVL
Trigger: CAGGACCATGGCCTCCCTGCAGTTTCTGTAGATAGT...AAGGAGCCTCCGAAGGACTCGCAGGGGCAGTCGCAGCTGATGTTTGAGTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCTCTGCGGCTCAGCTGTaGTGTTGTCCCAGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSSAAQL*CCPRCP
Trigger: GGGGCACCTGGGACAACAGCACAGCTGAGCCGCAGA...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGTCCAGCTCCGGGCCTaGCACGTTGTCGTACTGCGA +
Preference number: 4 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTEVQLRA*HVVVLR
Trigger: TCGCAGTACGACAACGTGCCAGGCCCGGAGCTGGAC...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCGGCATGTTTAGGGCCTaGGAAGAGTTTGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSGMFRA*EEFDQG
Trigger: GCCCTGGTCAAACTCTTCTCAGGCCCTAAACATGCC...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCAGCATCTCGGGTCCATaGTTGTCCCTGCGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCSISGP*LSLRLR
Trigger: CCTGAGACGCAGGGACAATCATGGACCCGAGATGCT...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CCTTGGCTGGCATATCTCCCAGGCCAGCACTCTTGTGACTCTGCCCCCTACATGGCATCTACGTGGGGCTaGAGACATTTCCCTGTATTC +
Preference number: 4 (lower is better)
Translates to: PWLAYLPGQHSCDSAPYMASTWG*RHFPVF
Trigger: GAATACAGGGAAATGTCTTCAGCCCCACGTAGATGC...CATGTAGGGGGCAGAGTCACAAGAGTGCTGGCCTGGGAGATATGCCAGCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp CCTTGGCTGGCATATCTCCCAGGCCAGCACTCTTGTGACTCTGCCCCCTACATGGTGCCACCTTTTAGATaGAAGGCTTGTCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: PWLAYLPGQHSCDSAPYMVPPFR*KACPVS
Trigger: GGAGACAGGACAAGCCTTTCATCTAAAAGGTGGCAC...CATGTAGGGGGCAGAGTCACAAGAGTGCTGGCCTGGGAGATATGCCAGCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGAAACCTCAGCCAGTCTaGCTCCCATCCCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWKPQPV*LPSQGT
Trigger: AGTGCCCTGGGATGGGAGTCAGACTGGCTGAGGTTT...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACAGGCACGTTGTCGTACTaGGATGCAGTGGAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTGTLSY*DAVEPR
Trigger: GCGGGGCTCCACTGCATCGCAGTACGACAACGTGCC...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGGGCACGTTGTCGTACTaGGATGCAGTGGAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEGTLSY*DAVEPR
Trigger: GCGGGGCTCCACTGCATCGCAGTACGACAACGTGCC...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGCACTCAAACATCAGCTaGGACTGCCCCTGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWHSNIS*DCPCES
Trigger: GGACTCGCAGGGGCAGTCGCAGCTGATGTTTGAGTG...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCATGCTCGTGCCTCCTGTaGGGCGCCCCGCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPCSCLL*GAPLSL
Trigger: GAGGGAGAGCGGGGCGCCCCACAGGAGGCACGAGCA...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCAGTCCCGGTCCTGCTCTaGGGGTGCGGGGAGTGCTCG +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPVPVLL*GCGECS
Trigger: CGAGCACTCCCCGCACCCCCAGAGCAGGACCGGGAC...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACACGTACTGCGATGCAGTaGAGCCCCGCTTCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTRTAMQ*SPASRP
Trigger: AGGACGGGAAGCGGGGCTCCACTGCATCGCAGTACG...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGGTCCAGCTCCGGGCCTaGCACGTTGTCGTACTGCGA +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEVQLRA*HVVVLR
Trigger: TCGCAGTACGACAACGTGCCAGGCCCGGAGCTGGAC...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCAGGCTGGAGTGCAGTaGCGTGATGTCGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEQAGVQ*RDVGSP
Trigger: CGGTGAGCCGACATCACGCCACTGCACTCCAGCCTG...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CAA 72 bp AGGGGTTTCAGCACCATGCTGACCAGGTGTCTGTTCTaGTGCTTGCATCCTAAGGGAACCCGAGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: RGFSTMLTRCLF*CLHPKGTRGRD
Trigger: GTCTCTCCCTCGGGTTCCCTTAGGATGCAAGCACAAGAACAGACACCTGGTCAGCATGGTGCTGAAACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCGGCCTGAGAAGAGTTTaGCCAGGGCCCAGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSGLRRV*PGPRRH
Trigger: ATGCCTTCTGGGCCCTGGTCAAACTCTTCTCAGGCC...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCAGGCCTGAGAAGAGTTTaGCCAGGGCCCAGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPGLRRV*PGPRRH
Trigger: ATGCCTTCTGGGCCCTGGTCAAACTCTTCTCAGGCC...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCTGGAGGCGGGGGCCCTaGATATGGATATCCAGATGG +
Preference number: 4 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSWRRGP*IWISRW
Trigger: CCATCTGGATATCCATATTCAGGGCCCCCGCCTCCA...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCTTCTCAGCTTCCACCTaGCCTGCATCAACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCFSAST*PASTAQ
Trigger: CTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAA...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGTTCTCAGCTTCCACCTaGCCTGCATCAACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWFSAST*PASTAQ
Trigger: CTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAA...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGAGACTCTCCCTCTGTTaGGGAGCACTGCAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWRLSLC*GALQAA
Trigger: TGCTGCTTGCAGTGCTCCTCAACAGAGGGAGAGTCT...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp GGTGCAAATGTAAAATGGTGCAGCTTCTTTGGAAAACAGTCTGGCAATTTCCTACGGGCGTCCCGGTCCTaGTCTGGGGGTGCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GANVKWCSFFGKQSGNFLRASRS*SGGAGS
Trigger: ACTCCCCGCACCCCCAGAGCAGGACCGGGACGCCCG...TAGGAAATTGCCAGACTGTTTTCCAAAGAAGCTGCACCATTTTACATTTGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCTTCCAGTGCAGATGCTaGCTCCTTCCTGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSFQCRC*LLPGAP
Trigger: AGGGGCTCCAGGAAGGAGGCAGCATCTGCACTGGAA...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACCGATTTCCGTCTTaGCGGCTGTGCTCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEHRFPS*RLCSLG
Trigger: CCCGAGAGAGCACAGCCGCCAAGACGGAAATCGGTG...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCCAACCTCTGACTCCCTaGTTCAAGCGATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSQPLTP*FKRFSC
Trigger: GCAGGAGAATCGCTTGAACCAGGGAGTCAGAGGTTG...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCAAGCAGCACCTGAGTaGAAGGACAGGGCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEQAAPE*KDRACR
Trigger: ACGGCAGGCCCTGTCCTTCCACTCAGGTGCTGCTTG...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACAACCATCCTGTCTCTGTaGAGCCCGTCACCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTTILSL*SPSPLS
Trigger: GGACAGGGGTGACGGGCTCCACAGAGACAGGATGGT...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CAA 72 bp TTCAGCACCATGCTGACCAGGTGTCTGTTCTTGTGCTaGCATCCTAAGGGAACCCGAGGGAGAGACCTGAAG +
Preference number: 4 (lower is better)
Translates to: FSTMLTRCLFLC*HPKGTRGRDLK
Trigger: CTTCAGGTCTCTCCCTCGGGTTCCCTTAGGATGCAAGCACAAGAACAGACACCTGGTCAGCATGGTGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCTTGTCTGATGTCAGGTaGACAGCCCCGTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSLSDVR*TAPCSV
Trigger: CACAGAGCACGGGGCTGTTCACCTGACATCAGACAA...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCAATCTGGCTCATCCCCTaGCAATACCCGACTTCCGTG +
Preference number: 4 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPIWLIP*QYPTSV
Trigger: CACGGAAGTCGGGTATTGTCAGGGGATGAGCCAGAT...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGATCTGGCTCATCCCCTaGCAATACCCGACTTCCGTG +
Preference number: 4 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTEIWLIP*QYPTSV
Trigger: CACGGAAGTCGGGTATTGTCAGGGGATGAGCCAGAT...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGCATGTTTAGGGCCTaGGAAGAGTTTGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTEGMFRA*EEFDQG
Trigger: GCCCTGGTCAAACTCTTCTCAGGCCCTAAACATGCC...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGTGGACGCCCCAAGACTaGAGTTCAGGTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEWTPQD*SSGGSC
Trigger: GCAGCTTCCACCTGAACTTCAGTCTTGGGGCGTCCA...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCACTTTGGCCGCACGTTTaGCACCCGCACCTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPLWPHV*HPHLGR
Trigger: CCTGCCGAGGTGCGGGTGTCAAACGTGCGGCCAAAG...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGAGCATCTCGGGTCCATaGTTGTCCCTGCGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCESISGP*LSLRLR
Trigger: CCTGAGACGCAGGGACAATCATGGACCCGAGATGCT...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGCCATACAGGGGAGCGTaGTGTTTCAGAGCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWPYRGA*CFRAKA
Trigger: AGCCTTTGCTCTGAAACATCACGCTCCCCTGTATGG...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAACCGTCTTGGCGGCTGTaGTCTCTCGGGCGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: KPHLATGRNINVGFSTIQPSWRL*SLGRPG
Trigger: ACCGGGACGCCCGAGAGAGCACAGCCGCCAAGACGG...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAAACCTGGGACGGTAACTaGGAGCGCGGGGTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: KPHLATGRNINVGFSTIQTWDGN*ERGVRC
Trigger: GCAGCGCACCCCGCGCTCGCAGTTACCGTCCCAGGT...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTCGGCGGCTACCGCAGTaGCCTCCGCCCCATTGTTTC +
Preference number: 4 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCRRLPQ*PPPHCF
Trigger: GAAACAATGGGGCGGAGGGCACTGCGGTAGCCGCCG...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACAAACATCAGCTGCGACTaGCCCTGCGAGTCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTNISCD*PCESFG
Trigger: TCCGAAGGACTCGCAGGGGCAGTCGCAGCTGATGTT...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCCCTGGAACTGTCCTGTaGACCCGATGGGAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCPGTVL*TRWEFS
Trigger: AGAAAACTCCCATCGGGTCCACAGGACAGTTCCAGG...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTCACCTCGGCAGGACCTaGGACGGTAACTGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCHLGRT*DGNCER
Trigger: GCGCTCGCAGTTACCGTCCCAGGTCCTGCCGAGGTG...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGTATAAATGGCCACCCTaGGACCTTCGTGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWYKWPP*DLRGEK
Trigger: CTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATA...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp TCCAGGTGGAACTTAGTACCTCTGCTCTACCAGTTCCCAGCTATCCCCTATGATGCTGAGGCAGGAGAATaGTGTCAACCTAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SRWNLVPLLYQFPAIPYDAEAGE*CQPRRR
Trigger: CCGCCTCCTAGGTTGACACCATTCTCCTGCCTCAGC...ATCATAGGGGATAGCTGGGAACTGGTAGAGCAGAGGTACTAAGTTCCACCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR CCA 90 bp TCCAGGTGGAACTTAGTACCTCTGCTCTACCAGTTCCCAGCTATCCCCTATGATATTAGCTGGGCGTGGTaGCGGGTTCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SRWNLVPLLYQFPAIPYDISWAW*RVPVVP
Trigger: TGGGACTACAGGAACCCGCCACCACGCCCAGCTAAT...ATCATAGGGGATAGCTGGGAACTGGTAGAGCAGAGGTACTAAGTTCCACCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR CCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACCCGACTGCTAGGCTGTaGGCAGCGGACAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNPTARL*AADRAG
Trigger: GCCAGCTCTGTCCGCTGCCCACAGCCTAGCAGTCGG...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCATTGTCAAGTCCAAGTaGACTTTCCAGGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSIVKSK*TFQASL
Trigger: GAGGGAGGCCTGGAAAGTCCACTTGGACTTGACAAT...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCCAGGTCTATTTGTCTaGTGTCAGGTGAACAGCCCC +
Preference number: 4 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSPGLFV*CQVNSP
Trigger: GGGGCTGTTCACCTGACATCAGACAAATAGACCTGG...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACAGGCATGTTTAGGGCCTaGGAAGAGTTTGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTGMFRA*EEFDQG
Trigger: GCCCTGGTCAAACTCTTCTCAGGCCCTAAACATGCC...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp AGGGCACTCAAACATCAGCTGCGACTGCCCCTGCGAGTCCTTCGGAGGCTCCTTTTTGCCAGGGTCTCCTaGAAAAATTCTACAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RALKHQLRLPLRVLRRLLFARVS*KNSTSS
Trigger: AGAACTTGTAGAATTTTTTCAGGAGACCCTGGCAAA...AAGGAGCCTCCGAAGGACTCGCAGGGGCAGTCGCAGCTGATGTTTGAGTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCATCTTCTGCGGCCGGTaGAGCTTTATATCTCACGGG +
Preference number: 4 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSIFCGR*SFISHG
Trigger: CCCGTGAGATATAAAGCTTCACCGGCCGCAGAAGAT...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp AGGGCACTCAAACATCAGCTGCGACTGCCCCTGCGAGTCCTTCGGAGGCTCCTTCATACTTTTGTACCTTaGAAGTTTAAAGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: RALKHQLRLPLRVLRRLLHTFVP*KFKAPP
Trigger: AGGTGGGGCTTTAAACTTTCAAGGTACAAAAGTATG...AAGGAGCCTCCGAAGGACTCGCAGGGGCAGTCGCAGCTGATGTTTGAGTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACATTCTCAGCTTCCACCTaGCCTGCATCAACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTFSAST*PASTAQ
Trigger: CTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAA...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCTGCTACATCCTGGTCTaGATCTTCCTTCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCCYILV*IFLHCG
Trigger: GCCACAGTGAAGGAAGATTCAGACCAGGATGTAGCA...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379237.6
CDS-3UTR TCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACAGCTGCAGGTCCTCCGTaGAGAGATCCTACTCGTAGA +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTAAGPP*RDPTRR
Trigger: TCTACGAGTAGGATCTCTTCACGGAGGACCTGCAGC...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGAGGAATCACAGCAGGTaGCAGCAGAGAGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTERNHSR*QQRAPH
Trigger: ATGAGGAGCTCTCTGCTGTCACCTGCTGTGATTCCT...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGGAGCGCGGGGTGCGCTaGTCGACCTTTGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGERGVR*STFAFH
Trigger: ATGGAAGGCAAAGGTCGAGCAGCGCACCCCGCGCTC...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGGGCACGTTGTCGTACTaGGATGCAGTGGAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGGTLSY*DAVEPR
Trigger: GCGGGGCTCCACTGCATCGCAGTACGACAACGTGCC...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCACTGGGACGGATATCGTaGATGACTTGGAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPLGRIS*MTWRLY
Trigger: GTACAGCCTCCAAGTCATGCACGATATCCGTCCCAG...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCAGCTGCAACTTCTCCTaGTCTGAGATTCGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSSCNFS*SEIRKS
Trigger: ACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCAGCT...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACACTCTGCAGAATGCCCTaGTCTCTCCCCCTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTLCRMP*SLPLLS
Trigger: AGACAAGAGGGGGAGAGAGCAGGGCATTCTGCAGAG...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCCTGGAACTGTCCTGTaGACCCGATGGGAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSPGTVL*TRWEFS
Trigger: AGAAAACTCCCATCGGGTCCACAGGACAGTTCCAGG...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp AGAGCAAAGGCTCTGAAGAAAACAGCTCCATTCACGAGAGAAAGCAGTACTAATCACCTCGGCAGGACCTaGGACGGTAACTGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: RAKALKKTAPFTRESSTNHLGRT*DGNCER
Trigger: GCGCTCGCAGTTACCGTCCCAGGTCCTGCCGAGGTG...ATTAGTACTGCTTTCTCTCGTGAATGGAGCTGTTTTCTTCAGAGCCTTTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTCGTACTGCGATGCAGTaGAGCCCCGCTTCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCRTAMQ*SPASRP
Trigger: AGGACGGGAAGCGGGGCTCCACTGCATCGCAGTACG...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCCCCAGGGCTAAACTGTaGAGAAGCAAAGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCPRAKL*RSKAAV
Trigger: AACAGCAGCTTTGCTTCTCCACAGTTTAGCCCTGGG...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCATATGGATATCCAGATaGACTGGCATCTTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSIWISR*TGIFCG
Trigger: GCCGCAGAAGATGCCAGTCCATCTGGATATCCATAT...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGAGCAACACTGACTCTTaGATGGAAAGCCCGTCCCGA +
Preference number: 4 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTESNTDS*MESPSR
Trigger: TCGGGACGGGCTTTCCATCCAAGAGTCAGTGTTGCT...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCATATAAATGGCCACCCTaGGACCTTCGTGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPYKWPP*DLRGEK
Trigger: CTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATA...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGAAAAGCCAGGTGTGGTaGTGGGCACCTTTAATCCCA +
Preference number: 4 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWKSQVW*WAPLIP
Trigger: TGGGATTAAAGGTGCCCACCACCACACCTGGCTTTT...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCAACCTAGCACTGTGGTaGTGGGTGACTATCCCTAAC +
Preference number: 4 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCNLALW*WVTIPN
Trigger: GTTAGGGATAGTCACCCACCACCACAGTGCTAGGTT...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACACCCAGACTTCACCTCTaGGCTGGAGTGGTATTCCTT +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTPRLHL*AGVVFL
Trigger: AAGGAATACCACTCCAGCTCAGAGGTGAAGTCTGGG...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCCCAGACTTCACCTCTaGGCTGGAGTGGTATTCCTT +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEPRLHL*AGVVFL
Trigger: AAGGAATACCACTCCAGCTCAGAGGTGAAGTCTGGG...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACACCAGGTCTATTTGTCTaGTGTCAGGTGAACAGCCCC +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTPGLFV*CQVNSP
Trigger: GGGGCTGTTCACCTGACATCAGACAAATAGACCTGG...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CATTTCCCTGTATTCTTACTACTAACAGACAGGAGAGATGTGCGAGTTGTTTACCTTTGGCCGCACGTTTaGCACCCGCACCTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: HFPVFLLLTDRRDVRVVYLWPHV*HPHLGR
Trigger: CCTGCCGAGGTGCGGGTGTCAAACGTGCGGCCAAAG...GTAAACAACTCGCACATCTCTCCTGTCTGTTAGTAGTAAGAATACAGGGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGGACGGATATCGTGCATaGCTTGGAGGCTGTACTTTA +
Preference number: 4 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWDGYRA*LGGCTL
Trigger: TAAAGTACAGCCTCCAAGTCATGCACGATATCCGTC...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGCTGGAAGGATTCAGTTaGGTCCCAGGGCTAAACTGT +
Preference number: 4 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTELEGFS*VPGLNC
Trigger: ACAGTTTAGCCCTGGGACTCAACTGAATCCTTCCAG...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACAATCTTCTGCGGCCGGTaGAGCTTTATATCTCACGGG +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTIFCGR*SFISHG
Trigger: CCCGTGAGATATAAAGCTTCACCGGCCGCAGAAGAT...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCAATCTCACAGCAACACTaGCTCTTGGATGGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPISQQH*LLDGKP
Trigger: GGGCTTTCCATCCAAGAGTCAGTGTTGCTGTGAGAT...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCACAACTTCTCCTGCTCTaGGATTCGCAAGAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPQLLLL*DSQESD
Trigger: GTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTG...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp AGGGCACTCAAACATCAGCTGCGACTGCCCCTGCGAGTCCTTCGGAGGCTCCTTTCAGTCTCTACACTATaGAAATCTGTACTAAATGGG +
Preference number: 4 (lower is better)
Translates to: RALKHQLRLPLRVLRRLLSVSTL*KSVLNG
Trigger: CCCATTTAGTACAGATTTTCATAGTGTAGAGACTGA...AAGGAGCCTCCGAAGGACTCGCAGGGGCAGTCGCAGCTGATGTTTGAGTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGTTTCAGCACCATGCTaGCCAGGTGTCTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTEVSAPC*PGVCSC
Trigger: ACAAGAACAGACACCTGGTCAGCATGGTGCTGAAAC...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCCCTGTCAGGCTCAGCTaGGACAAATCCTTCATAAGA +
Preference number: 4 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCPVRLS*DKSFIR
Trigger: TCTTATGAAGGATTTGTCTCAGCTGAGCCTGACAGG...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGCAGAAATGGCAAACCTaGAGGACAGAAAGCCGATCA +
Preference number: 4 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWQKWQT*RTESRS
Trigger: TGATCGGCTTTCTGTCCTTCAGGTTTGCCATTTCTG...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCCGGCCCATAAGCACATaGAAAATGCTCATCATTAGC +
Preference number: 4 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSRPIST*KMLIIS
Trigger: GCTAATGATGAGCATTTTTCATGTGCTTATGGGCCG...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCACCAAGGTTCAATCTCTaGACCTTCTCGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPPRFNL*TFSSSV
Trigger: GACAGAGGACGAGAAGGTGCAGAGATTGAACCTTGG...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACAAGTTCAGGTGGAAGCTaGCCCAAGGGCTTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTSSGGS*PKGFFG
Trigger: TCCAAAGAAGCCCTTGGGGCAGCTTCCACCTGAACT...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CATTTCCCTGTATTCTTACTACTAACAGACAGGAGAGATGTGCGAGTTGTTTACACTGCGAGCGCGGGGTaGGCTGCTCGACCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: HFPVFLLLTDRRDVRVVYTASAG*AARPLP
Trigger: AGGCAAAGGTCGAGCAGCGCACCCCGCGCTCGCAGT...GTAAACAACTCGCACATCTCTCCTGTCTGTTAGTAGTAAGAATACAGGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGTTGGTGACCCTGAATTaGCCGAATATCCCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCELVTLN*PNIPQH
Trigger: GTGCTGGGGGATATTCGGGCAATTCAGGGTCACCAA...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGACTATCTACAGAAACTaGAGGGAGGCCATGGTCCTG +
Preference number: 4 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTETIYRN*REAMVL
Trigger: CAGGACCATGGCCTCCCTGCAGTTTCTGTAGATAGT...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCGCGTGCATCCCTAAATaGTATTGCGATGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSACIPK*YCDVSG
Trigger: CCCGGAAACATCGCAATAGCATTTAGGGATGCACGC...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGAGCTTCCACCTGACCTaGATCAACAGCCCAGTTATT +
Preference number: 4 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWSFHLT*INSPVI
Trigger: AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCT...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGGCCATCGGTCCCCTCTaGAGAATGCCCTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGAIGPL*RMPCSL
Trigger: GAGAGAGCAGGGCATTCTGCAGAGGGGACCGATGGC...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGACTCTGCCCCCTACATaGTGGGGAGTCTCTATCTCT +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCETLPPT*WGVSIS
Trigger: AGAGATAGAGACTCCCCAGCATGTAGGGGGCAGAGT...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCTCCAAACCTTTGAGCTaGATCACTTCCCACTTGTGC +
Preference number: 4 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCSKPLS*ITSHLC
Trigger: GCACAAGTGGGAAGTGATGCAGCTCAAAGGTTTGGA...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGCGTGATTATATTGCCTaGAACTGTCCTGTGGACCCG +
Preference number: 4 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTERDYIA*NCPVDP
Trigger: CGGGTCCACAGGACAGTTCCAGGCAATATAATCACG...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCGTGATTATATTGCCTaGAACTGTCCTGTGGACCCG +
Preference number: 4 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSRDYIA*NCPVDP
Trigger: CGGGTCCACAGGACAGTTCCAGGCAATATAATCACG...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCACGTGATTATATTGCCTaGAACTGTCCTGTGGACCCG +
Preference number: 4 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPRDYIA*NCPVDP
Trigger: CGGGTCCACAGGACAGTTCCAGGCAATATAATCACG...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp TTGAGAGTCCCACTGAGTATGGCGAAATTTGTAAATTTCGGCATCTTCTTCCGAGTCCAGCTCCGGGCCTaGCACGTTGTCGTACTGCGA +
Preference number: 4 (lower is better)
Translates to: LRVPLSMAKFVNFGIFFRVQLRA*HVVVLR
Trigger: TCGCAGTACGACAACGTGCCAGGCCCGGAGCTGGAC...TCGGAAGAAGATGCCGAAATTTACAAATTTCGCCATACTCAGTGGGACTCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACACAGTACAAGGGGGCTTaGGCGGCTGTAAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTQYKGA*AAVRFL
Trigger: GAGAAATCTTACAGCCGCCCAAGCCCCCTTGTACTG...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCAGTACAAGGGGGCTTaGGCGGCTGTAAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEQYKGA*AAVRFL
Trigger: GAGAAATCTTACAGCCGCCCAAGCCCCCTTGTACTG...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCATTAATCCCAGCTACCTaGGAGGCTGAGACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPLIPAT*EAETGE
Trigger: TTCTCCTGTCTCAGCCTCCCAGGTAGCTGGGATTAA...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGCGACAGAATGTTAGCTaGCCAAATGAAGGACCAGAC +
Preference number: 4 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWRQNVS*PNEGPD
Trigger: GTCTGGTCCTTCATTTGGCCAGCTAACATTCTGTCG...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CAA 72 bp GTAAGGCCCAGAAGAGGTGTGTGGCCCAAGGTCACATaGCTAACATGTGGCACACTCAGACTACAATGCAGA +
Preference number: 4 (lower is better)
Translates to: VRPRRGVWPKVT*LTCGTLRLQCR
Trigger: TCTGCATTGTAGTCTGAGTGTGCCACATGTTAGCAATGTGACCTTGGGCCACACACCTCTTCTGGGCCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp ATCTCAACAGGACCTGGAACGGTGGCTGGCCATGAATGCAAAATTGAAACCTCATCCACAGCCACATTATaGTCTGGGAGCTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: ISTGPGTVAGHECKIETSSTATL*SGSSSS
Trigger: TGAGGAGGAGCTCCCAGATCATAATGTGGCTGTGGA...TGAGGTTTCAATTTTGCATTCATGGCCAGCCACCGTTCCAGGTCCTGTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCCCGAAATGTGCGGTTaGCATCCAGGTCTATTTGTC +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEPEMCG*HPGLFV
Trigger: GACAAATAGACCTGGATGTCAACCGCACATTTCGGG...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCAGGCCTGAGAAGAGTTTaGCCAGGGCCCAGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPGLRRV*PGPRRH
Trigger: ATGCCTTCTGGGCCCTGGTCAAACTCTTCTCAGGCC...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACTGGACGCCCCAAGACTaGAGTTCAGGTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNWTPQD*SSGGSC
Trigger: GCAGCTTCCACCTGAACTTCAGTCTTGGGGCGTCCA...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACATGGTTGGCAGCTGCGTaGTTATATTGCCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTWLAAA*LYCLEL
Trigger: CAGTTCCAGGCAATATAATCACGCAGCTGCCAACCA...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCTGGAAGGATTCAGTTaGGTCCCAGGGCTAAACTGT +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCELEGFS*VPGLNC
Trigger: ACAGTTTAGCCCTGGGACTCAACTGAATCCTTCCAG...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCAGAAAGAGTAGAACCATaGGGTCTCCTGGAAGGATTC +
Preference number: 4 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPERVEP*GLLEGF
Trigger: GAATCCTTCCAGGAGACCTCATGGTTCTACTCTTTC...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCGTGGGATTACAGGCGTaGACCACTGCAAATACTAAA +
Preference number: 4 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCVGLQA*TTANTK
Trigger: TTTAGTATTTGCAGTGGTTCACGCCTGTAATCCCAC...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp TTGAGAGTCCCACTGAGTATGGCGAAATTTGTAAATTTCGGCATCTTCTTCCGAACTGCAAGCAGCACCTaGGTGGAAGGACAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LRVPLSMAKFVNFGIFFRTASST*VEGQGL
Trigger: CAGGCCCTGTCCTTCCACTCAGGTGCTGCTTGCAGT...TCGGAAGAAGATGCCGAAATTTACAAATTTCGCCATACTCAGTGGGACTCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCTGCAGAAATCCATCTTaGCCCTTCTTCTCCCCATAC +
Preference number: 4 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSCRNPS*PFFSPY
Trigger: GTATGGGGAGAAGAAGGGTCAAGATGGATTTCTGCA...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCAAGGCCAGCACTCTTGTaGCTCTGCCCCCTACATGCT +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPRPALL*LCPLHA
Trigger: AGCATGTAGGGGGCAGAGTCACAAGAGTGCTGGCCT...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTCCGTCTTGGCGGCTGTaGTCTCTCGGGCGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAIPSWRL*SLGRPG
Trigger: ACCGGGACGCCCGAGAGAGCACAGCCGCCAAGACGG...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCATTTTGGTTGGCAGCTaGGTGATTATATTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSILVGS*VIILPG
Trigger: TCCAGGCAATATAATCACGCAGCTGCCAACCAAAAT...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTGAACTTGGCTCAGCGTaGTTTCTCGGGCTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCELGSA*FLGLGG
Trigger: CCCTCCTAGCCCGAGAAAGCACGCTGAGCCAAGTTC...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGTGTGATAAGCACTGCTaGACCTTTGGCCGTAAACTT +
Preference number: 4 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWCDKHC*TFGRKL
Trigger: AAGTTTACGGCCAAAGGTGCAGCAGTGCTTATCACA...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGGAGGGATCAGTAAGCTaGAACTTCTCCTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEEGSVS*NFSCSE
Trigger: CTCAGAGCAGGAGAAGTTGCAGCTTACTGATCCCTC...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCAATGGCCTGATGAGGTaGAGCAATATCCGTCGACTA +
Preference number: 4 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSNGLMR*SNIRRL
Trigger: TAGTCGACGGATATTGCTGCACCTCATCAGGCCATT...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCAAATGGCCTGATGAGGTaGAGCAATATCCGTCGACTA +
Preference number: 4 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPNGLMR*SNIRRL
Trigger: TAGTCGACGGATATTGCTGCACCTCATCAGGCCATT...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CCTTGGCTGGCATATCTCCCAGGCCAGCACTCTTGTGACTCTGCCCCCTACATGAATACACCATGTACATaGAGTTACAGGGCAAAATCA +
Preference number: 4 (lower is better)
Translates to: PWLAYLPGQHSCDSAPYMNTPCT*SYRAKS
Trigger: TGATTTTGCCCTGTAACTGCATGTACATGGTGTATT...CATGTAGGGGGCAGAGTCACAAGAGTGCTGGCCTGGGAGATATGCCAGCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGGTCCCGGTCCTGCTCTaGGGGTGCGGGGAGTGCTCG +
Preference number: 4 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLVPVLL*GCGECS
Trigger: CGAGCACTCCCCGCACCCCCAGAGCAGGACCGGGAC...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp TGCCTTAGTTTTCTCGTCTGTAAACTGGCAATTATAGTAGTACATACTTCGTTAGTCCCGGTCCTGCTCTaGGGGTGCGGGGAGTGCTCG +
Preference number: 4 (lower is better)
Translates to: CLSFLVCKLAIIVVHTSLVPVLL*GCGECS
Trigger: CGAGCACTCCCCGCACCCCCAGAGCAGGACCGGGAC...TAACGAAGTATGTACTACTATAATTGCCAGTTTACAGACGAGAAAACTAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCGTCCTGTGGACCCGATaGGAGTTTTCTTTGAAAATC +
Preference number: 4 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCVLWTR*EFSLKI
Trigger: GATTTTCAAAGAAAACTCCCATCGGGTCCACAGGAC...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTCACCTCGGCAGGACCTaGGACGGTAACTGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLHLGRT*DGNCER
Trigger: GCGCTCGCAGTTACCGTCCCAGGTCCTGCCGAGGTG...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCAATATGGATATCCAGATaGACTGGCATCTTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPIWISR*TGIFCG
Trigger: GCCGCAGAAGATGCCAGTCCATCTGGATATCCATAT...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp ACACAGCCATACAATGGAACAGCATTCAGCCCAGCAATAAAAAGGAAAGCAATTCCAGGTGCCCCACCTTaGCTGGCATATCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TQPYNGTAFSPAIKRKAIPGAPP*LAYLPG
Trigger: GCCTGGGAGATATGCCAGCCAAGGTGGGGCACCTGG...AATTGCTTTCCTTTTTATTGCTGGGCTGAATGCTGTTCCATTGTATGGCTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp ATCTCAACAGGACCTGGAACGGTGGCTGGCCATGAATGCAAAATTGAAACCTCACAGGACCTGGAACGGTaGCTGGCCATGAATGCAAAA +
Preference number: 4 (lower is better)
Translates to: ISTGPGTVAGHECKIETSQDLER*LAMNAK
Trigger: TTTTGCATTCATGGCCAGCCACCGTTCCAGGTCCTG...TGAGGTTTCAATTTTGCATTCATGGCCAGCCACCGTTCCAGGTCCTGTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CAA 72 bp CCGTCGACTACATTCCATAAAGAGGACAGAAATGGATaGTATAAATGGCCACCCTGGGACCTTCGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: PSTTFHKEDRNG*YKWPPWDLRGE
Trigger: CTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR CAA 72 bp TGCCCTGCTCTCTCCCCCTCTTGTCTTTCTATATGCTaGTCCTGTCAGGCTCAGCTGAGACAAATCCTTCAT +
Preference number: 4 (lower is better)
Translates to: CPALSPSCLSIC*SCQAQLRQILH
Trigger: ATGAAGGATTTGTCTCAGCTGAGCCTGACAGGACAAGCATATAGAAAGACAAGAGGGGGAGAGAGCAGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTGCTCCTGGGCAAGTTTaGGTGCTACATCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCAPGQV*VLHPGL
Trigger: CAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGC...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGGCTCCTGGGCAAGTTTaGGTGCTACATCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGAPGQV*VLHPGL
Trigger: CAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGC...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACTTGTCTGATGTCAGGTaGACAGCCCCGTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNLSDVR*TAPCSV
Trigger: CACAGAGCACGGGGCTGTTCACCTGACATCAGACAA...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACAGCACAAACTCCTTCCTaGTATTTGAAGTGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTAQTPS*YLKWRC
Trigger: GCAACGCCACTTCAAATATCAGGAAGGAGTTTGTGC...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TCCAGGTGGAACTTAGTACCTCTGCTCTACCAGTTCCCAGCTATCCCCTATGATTACCAGGCAAGCTCATaGACCACCGAATTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SRWNLVPLLYQFPAIPYDYQASS*TTEFFR
Trigger: TCTGAAGAATTCGGTGGTTCATGAGCTTGCCTGGTA...ATCATAGGGGATAGCTGGGAACTGGTAGAGCAGAGGTACTAAGTTCCACCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR TCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGCTCCAATCCAGAAGATaGAGCTGCAGGTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGLQSRR*SCRSSV
Trigger: CACGGAGGACCTGCAGCTTCATCTTCTGGATTGGAG...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCACAGCTCCTCATATACTaGAAATGCTCACAGACTTCC +
Preference number: 4 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPQLLIY*KCSQTS
Trigger: GGAAGTCTGTGAGCATTTTCAGTATATGAGGAGCTG...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCATGTTCAGTTGATTTTTaGCAGGGACACAGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPCSVDF*QGHSGE
Trigger: TTCCCCACTGTGTCCCTGTCAAAAATCAACTGAACA...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACATCTCATCCAAACCTTTaGGCTGCATCACTTCCCACT +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTSHPNL*AASLPT
Trigger: AGTGGGAAGTGATGCAGCTCAAAGGTTTGGATGAGA...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGCCGTCTTGGCGGCTGTaGTCTCTCGGGCGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLPSWRL*SLGRPG
Trigger: ACCGGGACGCCCGAGAGAGCACAGCCGCCAAGACGG...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCTATTTGAAGTGGCGTTaGTATTTTGGTTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCYLKWR*YFGWQL
Trigger: CAGCTGCCAACCAAAATAGCAACGCCACTTCAAATA...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTACTGCGAGCGCGGGGTaGGCTGCTCGACCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAITASAG*AARPLP
Trigger: AGGCAAAGGTCGAGCAGCGCACCCCGCGCTCGCAGT...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAAGAACTTGGCTCAGCGTaGTTTCTCGGGCTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: KPHLATGRNINVGFSTIQELGSA*FLGLGG
Trigger: CCCTCCTAGCCCGAGAAAGCACGCTGAGCCAAGTTC...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp TCCAGGTGGAACTTAGTACCTCTGCTCTACCAGTTCCCAGCTATCCCCTATGATATGAATTGCAGTCCTTaGCCTCAAGAAGCTCACAGC +
Preference number: 4 (lower is better)
Translates to: SRWNLVPLLYQFPAIPYDMNCSP*PQEAHS
Trigger: GCTGTGAGCTTCTTGAGGGCAAGGACTGCAATTCAT...ATCATAGGGGATAGCTGGGAACTGGTAGAGCAGAGGTACTAAGTTCCACCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR GCA 90 bp GGTGCAAATGTAAAATGGTGCAGCTTCTTTGGAAAACAGTCTGGCAATTTCCTAGTTGCCAGGCTGGAGTaGAGTGGCGTGATGTCGGCT +
Preference number: 4 (lower is better)
Translates to: GANVKWCSFFGKQSGNFLVARLE*SGVMSA
Trigger: AGCCGACATCACGCCACTGCACTCCAGCCTGGCAAC...TAGGAAATTGCCAGACTGTTTTCCAAAGAAGCTGCACCATTTTACATTTGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp AGAGCAAAGGCTCTGAAGAAAACAGCTCCATTCACGAGAGAAAGCAGTACTAATTTGGGAGGCAGAGGCTaGAGTGAGCTGAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: RAKALKKTAPFTRESSTNLGGRG*SELRSP
Trigger: GGGAGATCTCAGCTCACTGCAGCCTCTGCCTCCCAA...ATTAGTACTGCTTTCTCTCGTGAATGGAGCTGTTTTCTTCAGAGCCTTTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp ATCTCAACAGGACCTGGAACGGTGGCTGGCCATGAATGCAAAATTGAAACCTCAAAATGTCTTCGTGTCTaGGGCTCAGCTGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: ISTGPGTVAGHECKIETSKCLRV*GSAVLL
Trigger: CAACAGCACAGCTGAGCCGCAGACACGAAGACATTT...TGAGGTTTCAATTTTGCATTCATGGCCAGCCACCGTTCCAGGTCCTGTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGCTCACTGGGCCCTCCTaGTGCATTTCCAGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGLTGPS*CISSAD
Trigger: ATCTGCACTGGAAATGCAGCAGGAGGGCCCAGTGAG...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCAGTCCTGTGGACCCGATaGGAGTTTTCTTTGAAAATC +
Preference number: 4 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPVLWTR*EFSLKI
Trigger: GATTTTCAAAGAAAACTCCCATCGGGTCCACAGGAC...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTCGTACTGCGATGCAGTaGAGCCCCGCTTCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLRTAMQ*SPASRP
Trigger: AGGACGGGAAGCGGGGCTCCACTGCATCGCAGTACG...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACAAACCATGAGGTCTCCTaGAAGGATTCAGTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTNHEVS*KDSVES
Trigger: GGACTCAACTGAATCCTTCCAGGAGACCTCATGGTT...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTGATATCCAGATGGACTaGCATCTTCTGCGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCDIQMD*HLLRPV
Trigger: CACCGGCCGCAGAAGATGCCAGTCCATCTGGATATC...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGGATATCCAGATGGACTaGCATCTTCTGCGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGDIQMD*HLLRPV
Trigger: CACCGGCCGCAGAAGATGCCAGTCCATCTGGATATC...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCAGATATCCAGATGGACTaGCATCTTCTGCGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPDIQMD*HLLRPV
Trigger: CACCGGCCGCAGAAGATGCCAGTCCATCTGGATATC...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGATCCACTCTGTCGCTTaGGGCAAGTTAAACTTTGTG +
Preference number: 4 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTEIHSVA*GKLNFV
Trigger: CACAAAGTTTAACTTGCCCCAAGCGACAGAGTGGAT...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGCTGCCCCCTACATGCTaGGGAGTCTCTATCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGLPPTC*GVSISL
Trigger: GAGAGAGATAGAGACTCCCCAGCATGTAGGGGGCAG...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTTCCACAGCCACATTATaGTCTGGGAGCTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCSTATL*SGSSSS
Trigger: TGAGGAGGAGCTCCCAGATCATAATGTGGCTGTGGA...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCACCAGGTCTATTTGTCTaGTGTCAGGTGAACAGCCCC +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPPGLFV*CQVNSP
Trigger: GGGGCTGTTCACCTGACATCAGACAAATAGACCTGG...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTCCCGAGGGAGAGACCTaGAGTGACTGCAACTATGAA +
Preference number: 4 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCPEGET*SDCNYE
Trigger: TTCATAGTTGCAGTCACTTCAGGTCTCTCCCTCGGG...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp ATCTCAACAGGACCTGGAACGGTGGCTGGCCATGAATGCAAAATTGAAACCTCATCCACTCTACCAGACTaGCAAATGCACAGGGATGTT +
Preference number: 4 (lower is better)
Translates to: ISTGPGTVAGHECKIETSSTLPD*QMHRDV
Trigger: AACATCCCTGTGCATTTGTCAGTCTGGTAGAGTGGA...TGAGGTTTCAATTTTGCATTCATGGCCAGCCACCGTTCCAGGTCCTGTTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGGCGCTGCTCGACCTTTaGCTTCCATGGTGTATTTGG +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGALLDL*LPWCIW
Trigger: CCAAATACACCATGGAAGGCAAAGGTCGAGCAGCGC...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCAGCGCTGCTCGACCTTTaGCTTCCATGGTGTATTTGG +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPALLDL*LPWCIW
Trigger: CCAAATACACCATGGAAGGCAAAGGTCGAGCAGCGC...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACCTGGGACGGATATCGTaGATGACTTGGAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNLGRIS*MTWRLY
Trigger: GTACAGCCTCCAAGTCATGCACGATATCCGTCCCAG...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp ATCTCAACAGGACCTGGAACGGTGGCTGGCCATGAATGCAAAATTGAAACCTCAGGATGTGATAAGCACTaGTGCACCTTTGGCCGTAAA +
Preference number: 4 (lower is better)
Translates to: ISTGPGTVAGHECKIETSGCDKH*CTFGRK
Trigger: TTTACGGCCAAAGGTGCAGCAGTGCTTATCACATCC...TGAGGTTTCAATTTTGCATTCATGGCCAGCCACCGTTCCAGGTCCTGTTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACAAAACGTCTAGCAGAGTaGCAAACACACAGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTKRLAE*QTHSKH
Trigger: ATGCTTGCTGTGTGTTTGGCACTCTGCTAGACGTTT...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGCTCCTACATTGCTGGTaGAAATGTAAAATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTELLHCW*KCKMVQ
Trigger: CTGCACCATTTTACATTTGCACCAGCAATGTAGGAG...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGACACTCAGACTACAATaGAGACTTGACAACCTCCAG +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCETLRLQ*RLDNLQ
Trigger: CTGGAGGTTGTCAAGTCTGCATTGTAGTCTGAGTGT...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGACCTCTGAGCTGGAGTaGTATTCCTTTGTAAATTCG +
Preference number: 4 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTETSELE*YSFVNS
Trigger: CGAATTTACAAAGGAATACCACTCCAGCTCAGAGGT...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCAAGACTGAAGTTCAGGTaGAAGCTGCCCCAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPRLKFR*KLPQGL
Trigger: AAGCCCTTGGGGCAGCTTCCACCTGAACTTCAGTCT...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTCACCGATTTCCGTCTTaGCGGCTGTGCTCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: YIHLFLSFHLTCINSPVIHRFPS*RLCSLG
Trigger: CCCGAGAGAGCACAGCCGCCAAGACGGAAATCGGTG...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACCCTGGAACTGTCCTGTaGACCCGATGGGAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNPGTVL*TRWEFS
Trigger: AGAAAACTCCCATCGGGTCCACAGGACAGTTCCAGG...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCTGGCAAGTAATCCACTaGTGGAATGATCAATTTTCC +
Preference number: 4 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCWQVIH*WNDQFS
Trigger: GGAAAATTGATCATTCCACCAGTGGATTACTTGCCA...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACACTGACTCTTGGATaGAAAGCCCGTCCCGATTCC +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGTLTLG*KARPDS
Trigger: GGAATCGGGACGGGCTTTCCATCCAAGAGTCAGTGT...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGAGCAACACTGACTCTTaGATGGAAAGCCCGTCCCGA +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGSNTDS*MESPSR
Trigger: TCGGGACGGGCTTTCCATCCAAGAGTCAGTGTTGCT...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACTATAAATGGCCACCCTaGGACCTTCGTGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNYKWPP*DLRGEK
Trigger: CTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATA...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGAATGGATTGTATAAATaGCCACCCTGGGACCTTCGT +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCENGLYK*PPWDLR
Trigger: ACGAAGGTCCCAGGGTGGCCATTTATACAATCCATT...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCTTGAGTGCTACATCCTaGTCTGAATTCATGACTGGA +
Preference number: 4 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSLSATS*SEFMTG
Trigger: TCCAGTCATGAATTCAGACCAGGATGTAGCACTCAA...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCACCATGTTGGCCAGGATaGTCTCGATTTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPPCWPG*SRFPDL
Trigger: GAGGTCAGGAAATCGAGACCATCCTGGCCAACATGG...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCGCTGGGATCACTAGTTaGCCTTTATATTTGTCCATA +
Preference number: 4 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCAGITS*PLYLSI
Trigger: TATGGACAAATATAAAGGCCAACTAGTGATCCCAGC...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCACCCAGAAGAGGTGTGTaGCCCAAGGTCACATTGCTA +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPPRRGV*PKVTLL
Trigger: TAGCAATGTGACCTTGGGCCACACACCTCTTCTGGG...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGGCTCCACATCGCTCCTaGTCACTGAAACCTAGCACT +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGAPHRS*SLKPST
Trigger: AGTGCTAGGTTTCAGTGACCAGGAGCGATGTGGAGC...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp TTGAGAGTCCCACTGAGTATGGCGAAATTTGTAAATTTCGGCATCTTCTTCCGACTGCTCCTCCAGCCATaGCACAGTCTCCTCAGATTG +
Preference number: 4 (lower is better)
Translates to: LRVPLSMAKFVNFGIFFRLLLQP*HSLLRL
Trigger: CAATCTGAGGAGACTGTGCCATGGCTGGAGGAGCAG...TCGGAAGAAGATGCCGAAATTTACAAATTTCGCCATACTCAGTGGGACTCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCCGATCAAGGAAACACTaGAAAAACCATTTCATTGTG +
Preference number: 4 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCRSRKH*KNHFIV
Trigger: CACAATGAAATGGTTTTTTCAGTGTTTCCTTGATCG...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACACTCCTTCCTGATATTTaGAGTGGCGTTGCTATTTTG +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTLLPDI*SGVAIL
Trigger: CAAAATAGCAACGCCACTTCAAATATCAGGAAGGAG...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACATCTCACAGCAACACTaGCTCTTGGATGGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNISQQH*LLDGKP
Trigger: GGGCTTTCCATCCAAGAGTCAGTGTTGCTGTGAGAT...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCAGCATCTACGTGGGGCTaGAGACATTTCCCTGTATTC +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPASTWG*RHFPVF
Trigger: GAATACAGGGAAATGTCTTCAGCCCCACGTAGATGC...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGGCATCTACGTGGGGCTaGAGACATTTCCCTGTATTC +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGASTWG*RHFPVF
Trigger: GAATACAGGGAAATGTCTTCAGCCCCACGTAGATGC...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTCAACTTCTCCTGCTCTaGGATTCGCAAGAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCQLLLL*DSQESD
Trigger: GTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTG...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACGAGTACTGTGAGCACTaGGGGATCAGTAAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNEYCEH*GISKLQ
Trigger: TTGCAGCTTACTGATCCCTCAGTGCTCACAGTACTC...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp ATTCAAAGAGCTACTCTAAAGCATTTCCAGGTGGAACTTAGTACCTCTGCTCTAAGCTACTTGGGAGGCTaGGGCAGGAGAATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: IQRATLKHFQVELSTSALSYLGG*GRRMVS
Trigger: TGACACCATTCTCCTGCCTCAGCCTCCCAAGTAGCT...TAGAGCAGAGGTACTAAGTTCCACCTGGAAATGCTTTAGAGTAGCTCTTTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR TCA 90 bp AGAGCAAAGGCTCTGAAGAAAACAGCTCCATTCACGAGAGAAAGCAGTACTAATGTACTCCAGTCTGGGTaGGAGAGTGAAACCCCATCT +
Preference number: 4 (lower is better)
Translates to: RAKALKKTAPFTRESSTNVLQSG*ESETPS
Trigger: AGATGGGGTTTCACTCTCTCACCCAGACTGGAGTAC...ATTAGTACTGCTTTCTCTCGTGAATGGAGCTGTTTTCTTCAGAGCCTTTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCCATCCAAGATATTCTaGTTTAAGTGGTCTGGGATA +
Preference number: 4 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSPSKIF*FKWSGI
Trigger: TATCCCAGACCACTTAAATCAGAATATCTTGGATGG...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGCCAAGGTTCAATCTCTaGACCTTCTCGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGPRFNL*TFSSSV
Trigger: GACAGAGGACGAGAAGGTGCAGAGATTGAACCTTGG...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGATTTTGGTTGGCAGCTaGGTGATTATATTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEILVGS*VIILPG
Trigger: TCCAGGCAATATAATCACGCAGCTGCCAACCAAAAT...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGCAGACAGGAGAGATGTaGGAGTTGTTTACAATAGTA +
Preference number: 4 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTEQTGEM*ELFTIV
Trigger: TACTATTGTAAACAACTCGCACATCTCTCCTGTCTG...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCAGCGTGCATCCCTAAATaGTATTGCGATGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPACIPK*YCDVSG
Trigger: CCCGGAAACATCGCAATAGCATTTAGGGATGCACGC...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCATACTCTCTTGGAGTaGCTAAATCTTTGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSHTLLE*LNLCQC
Trigger: ACACTGACAAAGATTTAGGCACTCCAAGAGAGTATG...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACGTCTGTTCTTGTGCTTaGATCCTAAGGGAACCCGAG +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNVCSCA*ILREPE
Trigger: CTCGGGTTCCCTTAGGATGCAAGCACAAGAACAGAC...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACATCTTGTCTTTCTATATaGTTGTCCTGTCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTSCLSI*LSCQAQ
Trigger: CTGAGCCTGACAGGACAAGCATATAGAAAGACAAGA...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp CATTTCCCTGTATTCTTACTACTAACAGACAGGAGAGATGTGCGAGTTGTTTACCACTCTTCACCCTACTaGCCAACGCAGGAACTGCAG +
Preference number: 4 (lower is better)
Translates to: HFPVFLLLTDRRDVRVVYHSSPY*PTQELQ
Trigger: CTGCAGTTCCTGCGTTGGGCAGTAGGGTGAAGAGTG...GTAAACAACTCGCACATCTCTCCTGTCTGTTAGTAGTAAGAATACAGGGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTGCTGTTGTCCCAGGTaGCCCACCTTGGCTGGCATA +
Preference number: 4 (lower is better)
Translates to: YIHLFLSFHLTCINSPVICCCPR*PTLAGI
Trigger: TATGCCAGCCAAGGTGGGGCACCTGGGACAACAGCA...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTCTCCTCAGATTGCCCTaGCTGTGCCTCCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAILLRLP*LCLLPP
Trigger: AGGAGGGAGGAGGCACAGGCAGGGCAATCTGAGGAG...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTACAGTCTCCTCAGATTaGCCTGCCTGTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: YIHLFLSFHLTCINSPVITVSSD*PACASS
Trigger: GGAGGAGGCACAGGCAGGGCAATCTGAGGAGACTGT...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp ACACAGCCATACAATGGAACAGCATTCAGCCCAGCAATAAAAAGGAAAGCAATTCATTTCCAGTGCAGATaGTGCCTCCTTCCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: TQPYNGTAFSPAIKRKAIHFQCR*CLLPGA
Trigger: GGCTCCAGGAAGGAGGCAGCATCTGCACTGGAAATG...AATTGCTTTCCTTTTTATTGCTGGGCTGAATGCTGTTCCATTGTATGGCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACATCTCTAAACATAATGTaGTCCCGAAATGTGCGGTTG +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTSLNIM*SRNVRL
Trigger: CAACCGCACATTTCGGGACCACATTATGTTTAGAGA...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCACCCAGGGCTAAACTGTaGAGAAGCAAAGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPPRAKL*RSKAAV
Trigger: AACAGCAGCTTTGCTTCTCCACAGTTTAGCCCTGGG...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp AGAGCAAAGGCTCTGAAGAAAACAGCTCCATTCACGAGAGAAAGCAGTACTAATACACTGACTCTTGGATaGAAAGCCCGTCCCGATTCC +
Preference number: 4 (lower is better)
Translates to: RAKALKKTAPFTRESSTNTLTLG*KARPDS
Trigger: GGAATCGGGACGGGCTTTCCATCCAAGAGTCAGTGT...ATTAGTACTGCTTTCTCTCGTGAATGGAGCTGTTTTCTTCAGAGCCTTTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAAAGCAACACTGACTCTTaGATGGAAAGCCCGTCCCGA +
Preference number: 4 (lower is better)
Translates to: KPHLATGRNINVGFSTIQSNTDS*MESPSR
Trigger: TCGGGACGGGCTTTCCATCCAAGAGTCAGTGTTGCT...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTGACACAGCCATACAATaGAACAGCATTCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCDTAIQ*NSIQPS
Trigger: GCTGGGCTGAATGCTGTTCCATTGTATGGCTGTGTC...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp ATCTCAACAGGACCTGGAACGGTGGCTGGCCATGAATGCAAAATTGAAACCTCATCAAAACATTCCCTATaGAAACCCCAGCAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: ISTGPGTVAGHECKIETSSKHSL*KPQQAF
Trigger: AAAGGCCTGCTGGGGTTTCCATAGGGAATGTTTTGA...TGAGGTTTCAATTTTGCATTCATGGCCAGCCACCGTTCCAGGTCCTGTTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp TGCCTTAGTTTTCTCGTCTGTAAACTGGCAATTATAGTAGTACATACTTCGTTACCAGGCCTCCCTCACTaGGCCCTCCTGCTGCATTTC +
Preference number: 4 (lower is better)
Translates to: CLSFLVCKLAIIVVHTSLPGLPH*ALLLHF
Trigger: GAAATGCAGCAGGAGGGCCCAGTGAGGGAGGCCTGG...TAACGAAGTATGTACTACTATAATTGCCAGTTTACAGACGAGAAAACTAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCCAAGGGATGCTTTGTaGAAGTACTTGAGAATGTTG +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEPRDAL*KYLRML
Trigger: CAACATTCTCAAGTACTTCCACAAAGCATCCCTTGG...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAACCCGAAATGTGCGGTTaGCATCCAGGTCTATTTGTC +
Preference number: 4 (lower is better)
Translates to: KPHLATGRNINVGFSTIQPEMCG*HPGLFV
Trigger: GACAAATAGACCTGGATGTCAACCGCACATTTCGGG...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTATCTGGCTCATCCCCTaGCAATACCCGACTTCCGTG +
Preference number: 4 (lower is better)
Translates to: YIHLFLSFHLTCINSPVIIWLIP*QYPTSV
Trigger: CACGGAAGTCGGGTATTGTCAGGGGATGAGCCAGAT...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTTGGACGCCCCAAGACTaGAGTTCAGGTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAIWTPQD*SSGGSC
Trigger: GCAGCTTCCACCTGAACTTCAGTCTTGGGGCGTCCA...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TTGAGAGTCCCACTGAGTATGGCGAAATTTGTAAATTTCGGCATCTTCTTCCGATGGTTGGCAGCTGCGTaGTTATATTGCCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: LRVPLSMAKFVNFGIFFRWLAAA*LYCLEL
Trigger: CAGTTCCAGGCAATATAATCACGCAGCTGCCAACCA...TCGGAAGAAGATGCCGAAATTTACAAATTTCGCCATACTCAGTGGGACTCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGGCACAAACTCCTTCCTaGTATTTGAAGTGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGAQTPS*YLKWRC
Trigger: GCAACGCCACTTCAAATATCAGGAAGGAGTTTGTGC...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTGCACAAACTCCTTCCTaGTATTTGAAGTGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCAQTPS*YLKWRC
Trigger: GCAACGCCACTTCAAATATCAGGAAGGAGTTTGTGC...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGGACGGATATCGTGCATaGCTTGGAGGCTGTACTTTA +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGDGYRA*LGGCTL
Trigger: TAAAGTACAGCCTCCAAGTCATGCACGATATCCGTC...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACGAAAGAGTAGAACCATaGGGTCTCCTGGAAGGATTC +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNERVEP*GLLEGF
Trigger: GAATCCTTCCAGGAGACCTCATGGTTCTACTCTTTC...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTTGGAGGCGGGGGCCCTaGATATGGATATCCAGATGG +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAIWRRGP*IWISRW
Trigger: CCATCTGGATATCCATATTCAGGGCCCCCGCCTCCA...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCATCACATCTGGAAGCATaGATCCAGCACAATGCAGGT +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPSHLEA*IQHNAG
Trigger: ACCTGCATTGTGCTGGATTCATGCTTCCAGATGTGA...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp TTGAGAGTCCCACTGAGTATGGCGAAATTTGTAAATTTCGGCATCTTCTTCCGATTCATAAGACTTCCCTaGACCTCTTGGGCTGGGATC +
Preference number: 4 (lower is better)
Translates to: LRVPLSMAKFVNFGIFFRFIRLP*TSWAGI
Trigger: GATCCCAGCCCAAGAGGTTCAGGGAAGTCTTATGAA...TCGGAAGAAGATGCCGAAATTTACAAATTTCGCCATACTCAGTGGGACTCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp TTGAGAGTCCCACTGAGTATGGCGAAATTTGTAAATTTCGGCATCTTCTTCCGACACTGTGGTGGTGGGTaGCTATCCCTAACATTCCAA +
Preference number: 4 (lower is better)
Translates to: LRVPLSMAKFVNFGIFFRHCGGG*LSLTFQ
Trigger: TTGGAATGTTAGGGATAGTCACCCACCACCACAGTG...TCGGAAGAAGATGCCGAAATTTACAAATTTCGCCATACTCAGTGGGACTCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACCTTTCAATTTCCAGGTaGTTTTGCCGTTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNLSISR*FCRSTA
Trigger: GGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAG...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CATTTCCCTGTATTCTTACTACTAACAGACAGGAGAGATGTGCGAGTTGTTTACGCGCTGCTCGACCTTTaGCTTCCATGGTGTATTTGG +
Preference number: 4 (lower is better)
Translates to: HFPVFLLLTDRRDVRVVYALLDL*LPWCIW
Trigger: CCAAATACACCATGGAAGGCAAAGGTCGAGCAGCGC...GTAAACAACTCGCACATCTCTCCTGTCTGTTAGTAGTAAGAATACAGGGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CATTTCCCTGTATTCTTACTACTAACAGACAGGAGAGATGTGCGAGTTGTTTACCTGGGACGGATATCGTaGATGACTTGGAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: HFPVFLLLTDRRDVRVVYLGRIS*MTWRLY
Trigger: GTACAGCCTCCAAGTCATGCACGATATCCGTCCCAG...GTAAACAACTCGCACATCTCTCCTGTCTGTTAGTAGTAAGAATACAGGGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCATCCCTAAATGCTATTaGGATGTTTCCGGGTTAAAT +
Preference number: 4 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSIPKCY*DVSGLN
Trigger: ATTTAACCCGGAAACATCGCAATAGCATTTAGGGAT...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGAGCTGCAACTTCTCCTaGTCTGAGATTCGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGSCNFS*SEIRKS
Trigger: ACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCAGCT...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp TTGAGAGTCCCACTGAGTATGGCGAAATTTGTAAATTTCGGCATCTTCTTCCGAGAGGGATCAGTAAGCTaGAACTTCTCCTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LRVPLSMAKFVNFGIFFREGSVS*NFSCSE
Trigger: CTCAGAGCAGGAGAAGTTGCAGCTTACTGATCCCTC...TCGGAAGAAGATGCCGAAATTTACAAATTTCGCCATACTCAGTGGGACTCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCATACTCTCTTGGAGTaGCTAAATCTTTGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEHTLLE*LNLCQC
Trigger: ACACTGACAAAGATTTAGGCACTCCAAGAGAGTATG...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCAAGGTGTCTGTTCTTGTaGTTGCATCCTAAGGGAACC +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPRCLFL*LHPKGT
Trigger: GGTTCCCTTAGGATGCAAGCACAAGAACAGACACCT...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCACTCGTAGACATGGCATaGTTTTCTCGCACCATGACA +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPLVDMA*FSRTMT
Trigger: TGTCATGGTGCGAGAAAAGCATGCCATGTCTACGAG...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCAAGGATCAAGTTCAACTaGACACAACTCCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPRIKFN*TQLPPP
Trigger: TGGTGGAGGGAGTTGTGTGCAGTTGAACTTGATCCT...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAATGTGCCTGTGGCCACTaGAGTCTGATTCTGACTCTA +
Preference number: 4 (lower is better)
Translates to: KPHLATGRNINVGFSTIQCACGH*SLILTL
Trigger: TAGAGTCAGAATCAGACTGCAGTGGCCACAGGCACA...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGCTACGACTCAATCGCTaGACATCCCATCTCATCCAA +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGLRLNR*TSHLIQ
Trigger: TTGGATGAGATGGGATGTGCAGCGATTGAGTCGTAG...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACTTTCCCATGTAAATaGACGCCCCTCCAATCCCTA +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGTFPCK*TPLQSL
Trigger: TAGGGATTGGAGGGGCGTGCATTTACATGGGAAAGT...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCAATTTCAGCTCGCTCCTaGGCAAGTTTGAGTGCTACA +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPISARS*ASLSAT
Trigger: TGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAAT...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGCACCGATTTCCGTCTTaGCGGCTGTGCTCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLHRFPS*RLCSLG
Trigger: CCCGAGAGAGCACAGCCGCCAAGACGGAAATCGGTG...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCAATATCGTGCATGACTTaGAGGCTGTACTTTAAAAGT +
Preference number: 4 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPISCMT*RLYFKS
Trigger: ACTTTTAAAGTACAGCCTCCAAGTCATGCACGATAT...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCATATCGTGCATGACTTaGAGGCTGTACTTTAAAAGT +
Preference number: 4 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSISCMT*RLYFKS
Trigger: ACTTTTAAAGTACAGCCTCCAAGTCATGCACGATAT...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGAACCATGAGGTCTCCTaGAAGGATTCAGTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGNHEVS*KDSVES
Trigger: GGACTCAACTGAATCCTTCCAGGAGACCTCATGGTT...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CATTTCCCTGTATTCTTACTACTAACAGACAGGAGAGATGTGCGAGTTGTTTACACACTGACTCTTGGATaGAAAGCCCGTCCCGATTCC +
Preference number: 4 (lower is better)
Translates to: HFPVFLLLTDRRDVRVVYTLTLG*KARPDS
Trigger: GGAATCGGGACGGGCTTTCCATCCAAGAGTCAGTGT...GTAAACAACTCGCACATCTCTCCTGTCTGTTAGTAGTAAGAATACAGGGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGTTAAGCACCATTAAGTaGTTAGCCTTTCTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTELSTIK*LAFLSN
Trigger: ATTGGAGAGAAAGGCTAACCACTTAATGGTGCTTAA...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCAATTACTACTTCACCTaGCCTCTTTTCATTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCNYYFT*PLFILS
Trigger: TGAAAGAATGAAAAGAGGCCAGGTGAAGTAGTAATT...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp ACACAGCCATACAATGGAACAGCATTCAGCCCAGCAATAAAAAGGAAAGCAATTTTCACTTCCACAGCATaGAGGGACCACACCAGGTCA +
Preference number: 4 (lower is better)
Translates to: TQPYNGTAFSPAIKRKAIFTSTA*RDHTRS
Trigger: TGACCTGGTGTGGTCCCTCCATGCTGTGGAAGTGAA...AATTGCTTTCCTTTTTATTGCTGGGCTGAATGCTGTTCCATTGTATGGCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCAGTGACAACACTGTGTaGATATTTCAGAGATTAACT +
Preference number: 4 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCSDNTV*IFQRLT
Trigger: AGTTAATCTCTGAAATATCCACACAGTGTTGTCACT...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CAA 72 bp GATCAGAATATAAGCCCCATGAGGACAGGGACTTTGTaGTCCTGTTACATGATGATCTCAACAGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: DQNISPMRTGTL*SCYMMISTGPG
Trigger: TCCAGGTCCTGTTGAGATCATCATGTAACAGGACAACAAAGTCCCTGTCCTCATGGGGCTTATATTCTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACGGTCTGAATCCTTTGTaGGATAATCAGTCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNGLNPL*DNQSGL
Trigger: AAGGCCAGACTGATTATCTCACAAAGGATTCAGACC...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277575.5
CDS-3UTR TCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTGCTCCTGGGCAAGTTTaGGTGCTACATCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAIAPGQV*VLHPGL
Trigger: CAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGC...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTTCCACAGCCACATTATaGTCTGGGAGCTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLSTATL*SGSSSS
Trigger: TGAGGAGGAGCTCCCAGATCATAATGTGGCTGTGGA...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTTTGTCTGATGTCAGGTaGACAGCCCCGTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAILSDVR*TAPCSV
Trigger: CACAGAGCACGGGGCTGTTCACCTGACATCAGACAA...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCGATCAAGGAAACACTaGAAAAACCATTTCATTGTG +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCERSRKH*KNHFIV
Trigger: CACAATGAAATGGTTTTTTCAGTGTTTCCTTGATCG...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAAGAAAGAGTAGAACCATaGGGTCTCCTGGAAGGATTC +
Preference number: 4 (lower is better)
Translates to: KPHLATGRNINVGFSTIQERVEP*GLLEGF
Trigger: GAATCCTTCCAGGAGACCTCATGGTTCTACTCTTTC...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGAATCCACTGGTGGAATaGTCAATTTTCCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: SNHTANAVSVAAPHEYCENPLVE*SIFHSL
Trigger: CAAAGAATGGAAAATTGATCATTCCACCAGTGGATT...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TGCCTTAGTTTTCTCGTCTGTAAACTGGCAATTATAGTAGTACATACTTCGTTATGGAGGCGGGGGCCCTaGATATGGATATCCAGATGG +
Preference number: 4 (lower is better)
Translates to: CLSFLVCKLAIIVVHTSLWRRGP*IWISRW
Trigger: CCATCTGGATATCCATATTCAGGGCCCCCGCCTCCA...TAACGAAGTATGTACTACTATAATTGCCAGTTTACAGACGAGAAAACTAAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp GGTGCAAATGTAAAATGGTGCAGCTTCTTTGGAAAACAGTCTGGCAATTTCCTAGAGTACTGTGAGCACTaGGGGATCAGTAAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: GANVKWCSFFGKQSGNFLEYCEH*GISKLQ
Trigger: TTGCAGCTTACTGATCCCTCAGTGCTCACAGTACTC...TAGGAAATTGCCAGACTGTTTTCCAAAGAAGCTGCACCATTTTACATTTGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTGGCTGCTTTTTGCCTTaGTGGTGTCACCAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLGCFLP*WCHQLL
Trigger: AAGGAGCTGGTGACACCATCAAGGCAAAAAGCAGCC...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379237.6
CDS-3UTR TCA 90 bp CACTTGAGTATACCCAAGAAGACCACAGAAAGAAGCAACATAGAGCAAATCAAAGGCTGCTTTTTGCCTTaGTGGTGTCACCAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: HLSIPKKTTERSNIEQIKGCFLP*WCHQLL
Trigger: AAGGAGCTGGTGACACCATCAAGGCAAAAAGCAGCC...TTTGATTTGCTCTATGTTGCTTCTTTCTGTGGTCTTCTTGGGTATACTCAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR TCA 90 bp TCCAGGTGGAACTTAGTACCTCTGCTCTACCAGTTCCCAGCTATCCCCTATGATAGTAGAGAAGTTGTATaGTCTTACTACACCACAGAT +
Preference number: 4 (lower is better)
Translates to: SRWNLVPLLYQFPAIPYDSREVV*SYYTTD
Trigger: ATCTGTGGTGTAGTAAGATCATACAACTTCTCTACT...ATCATAGGGGATAGCTGGGAACTGGTAGAGCAGAGGTACTAAGTTCCACCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR TCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCAGACTGGAAATGGGTCTaGATGTTGTCCCAATCAGAT +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPDWKWV*MLSQSD
Trigger: ATCTGATTGGGACAACATTCAGACCCATTTCCAGTC...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTCCTGGTCTGAATTCATaGCTGGAAATGGGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCPGLNS*LEMGLN
Trigger: ATTCAGACCCATTTCCAGTCATGAATTCAGACCAGG...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGTCAGAGCAAAGGCTCTaGAGAAAACAGCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGSEQRL*RKQLHS
Trigger: TGAATGGAGCTGTTTTCTTCAGAGCCTTTGCTCTGA...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTATCGCTCCTGGTCACTaGAACCTAGCACTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAIIAPGH*NLALWW
Trigger: CCACCACAGTGCTAGGTTTCAGTGACCAGGAGCGAT...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp CATTTCCCTGTATTCTTACTACTAACAGACAGGAGAGATGTGCGAGTTGTTTACCCAAGGTTCAATCTCTaGACCTTCTCGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: HFPVFLLLTDRRDVRVVYPRFNL*TFSSSV
Trigger: GACAGAGGACGAGAAGGTGCAGAGATTGAACCTTGG...GTAAACAACTCGCACATCTCTCCTGTCTGTTAGTAGTAAGAATACAGGGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGTGGAATAAGGATTGTTaGTTAACACCATATCTGTCT +
Preference number: 4 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTEWNKDC*LTPYLS
Trigger: AGACAGATATGGTGTTAAGCAACAATCCTTATTCCA...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTAGTTCAGGTGGAAGCTaGCCCAAGGGCTTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: YIHLFLSFHLTCINSPVISSGGS*PKGFFG
Trigger: TCCAAAGAAGCCCTTGGGGCAGCTTCCACCTGAACT...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGGAACTTGGCTCAGCGTaGTTTCTCGGGCTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLELGSA*FLGLGG
Trigger: CCCTCCTAGCCCGAGAAAGCACGCTGAGCCAAGTTC...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTTTGGTGACCCTGAATTaGCCGAATATCCCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLLVTLN*PNIPQH
Trigger: GTGCTGGGGGATATTCGGGCAATTCAGGGTCACCAA...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAAGTCCATGATTGTCCCTaGGTCTCAGGTCTGTATGTA +
Preference number: 4 (lower is better)
Translates to: KPHLATGRNINVGFSTIQVHDCP*VSGLYV
Trigger: TACATACAGACCTGAGACGCAGGGACAATCATGGAC...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACAATCCCTAAATGCTATTaGGATGTTTCCGGGTTAAAT +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTIPKCY*DVSGLN
Trigger: ATTTAACCCGGAAACATCGCAATAGCATTTAGGGAT...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTTGTGATAAGCACTGCTaGACCTTTGGCCGTAAACTT +
Preference number: 4 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCCDKHC*TFGRKL
Trigger: AAGTTTACGGCCAAAGGTGCAGCAGTGCTTATCACA...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACTGTGATAAGCACTGCTaGACCTTTGGCCGTAAACTT +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNCDKHC*TFGRKL
Trigger: AAGTTTACGGCCAAAGGTGCAGCAGTGCTTATCACA...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAAAGCTGCAACTTCTCCTaGTCTGAGATTCGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: KPHLATGRNINVGFSTIQSCNFS*SEIRKS
Trigger: ACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCAGCT...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp TGCCTTAGTTTTCTCGTCTGTAAACTGGCAATTATAGTAGTACATACTTCGTTATGGAAGGACAGGGCCTaGCGTCTTCCGTTTGATGCC +
Preference number: 4 (lower is better)
Translates to: CLSFLVCKLAIIVVHTSLWKDRA*RLPFDA
Trigger: GGCATCAAACGGAAGACGGCAGGCCCTGTCCTTCCA...TAACGAAGTATGTACTACTATAATTGCCAGTTTACAGACGAGAAAACTAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp TTGAGAGTCCCACTGAGTATGGCGAAATTTGTAAATTTCGGCATCTTCTTCCGAGTGGCTGGCCATGAATaGAAAATTGAAACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LRVPLSMAKFVNFGIFFRVAGHE*KIETSA
Trigger: GGCTGAGGTTTCAATTTTGCATTCATGGCCAGCCAC...TCGGAAGAAGATGCCGAAATTTACAAATTTCGCCATACTCAGTGGGACTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACAAATAAAACCAAGGGATaGTTTGTGGAAGTACTTGAG +
Preference number: 4 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTNKTKG*FVEVLE
Trigger: CTCAAGTACTTCCACAAAGCATCCCTTGGTTTTATT...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAAATTTCAGCTCGCTCCTaGGCAAGTTTGAGTGCTACA +
Preference number: 4 (lower is better)
Translates to: KPHLATGRNINVGFSTIQISARS*ASLSAT
Trigger: TGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAAT...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCAGTCCTGTGGACCCGATaGGAGTTTTCTTTGAAAATC +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPVLWTR*EFSLKI
Trigger: GATTTTCAAAGAAAACTCCCATCGGGTCCACAGGAC...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAAAACCATGAGGTCTCCTaGAAGGATTCAGTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: KPHLATGRNINVGFSTIQNHEVS*KDSVES
Trigger: GGACTCAACTGAATCCTTCCAGGAGACCTCATGGTT...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACCCATGTTCTGTTATCTaGCAAGTAATCCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNPCSVI*QVIHWW
Trigger: CCACCAGTGGATTACTTGCCAGATAACAGAACATGG...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR CAA 72 bp ATGGATCAGAATATAAGCCCCATGAGGACAGGGACTTaGTTGTCCTGTTACATGATGATCTCAACAGGACCT +
Preference number: 4 (lower is better)
Translates to: MDQNISPMRTGT*LSCYMMISTGP
Trigger: AGGTCCTGTTGAGATCATCATGTAACAGGACAACAAAGTCCCTGTCCTCATGGGGCTTATATTCTGATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTCCCAGACTTCACCTCTaGGCTGGAGTGGTATTCCTT +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAIPRLHL*AGVVFL
Trigger: AAGGAATACCACTCCAGCTCAGAGGTGAAGTCTGGG...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTCTCCTTCCTGATATTTaGAGTGGCGTTGCTATTTTG +
Preference number: 4 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCLLPDI*SGVAIL
Trigger: CAAAATAGCAACGCCACTTCAAATATCAGGAAGGAG...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGCTTGTTGGATACTTTTaGTGGACTAGAACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGLVGYF*WTRTWL
Trigger: GAGCCAAGTTCTAGTCCATCAAAAGTATCCAACAAG...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCACTTGTTGGATACTTTTaGTGGACTAGAACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPLVGYF*WTRTWL
Trigger: GAGCCAAGTTCTAGTCCATCAAAAGTATCCAACAAG...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CATTTCCCTGTATTCTTACTACTAACAGACAGGAGAGATGTGCGAGTTGTTTACGACGGATATCGTGCATaGCTTGGAGGCTGTACTTTA +
Preference number: 4 (lower is better)
Translates to: HFPVFLLLTDRRDVRVVYDGYRA*LGGCTL
Trigger: TAAAGTACAGCCTCCAAGTCATGCACGATATCCGTC...GTAAACAACTCGCACATCTCTCCTGTCTGTTAGTAGTAAGAATACAGGGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTCTGGAAGGATTCAGTTaGGTCCCAGGGCTAAACTGT +
Preference number: 4 (lower is better)
Translates to: YIHLFLSFHLTCINSPVILEGFS*VPGLNC
Trigger: ACAGTTTAGCCCTGGGACTCAACTGAATCCTTCCAG...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTATCTTCTGCGGCCGGTaGAGCTTTATATCTCACGGG +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAIIFCGR*SFISHG
Trigger: CCCGTGAGATATAAAGCTTCACCGGCCGCAGAAGAT...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTGAGTACTGTGAGCACTaGGGGATCAGTAAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: YIHLFLSFHLTCINSPVIEYCEH*GISKLQ
Trigger: TTGCAGCTTACTGATCCCTCAGTGCTCACAGTACTC...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTATTTTGGTTGGCAGCTaGGTGATTATATTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCILVGS*VIILPG
Trigger: TCCAGGCAATATAATCACGCAGCTGCCAACCAAAAT...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACTATTTGAAGTGGCGTTaGTATTTTGGTTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNYLKWR*YFGWQL
Trigger: CAGCTGCCAACCAAAATAGCAACGCCACTTCAAATA...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTTTGGTGACCCTGAATTaGCCGAATATCCCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAILVTLN*PNIPQH
Trigger: GTGCTGGGGGATATTCGGGCAATTCAGGGTCACCAA...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTACTATCTACAGAAACTaGAGGGAGGCCATGGTCCTG +
Preference number: 4 (lower is better)
Translates to: YIHLFLSFHLTCINSPVITIYRN*REAMVL
Trigger: CAGGACCATGGCCTCCCTGCAGTTTCTGTAGATAGT...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGAATTACCACTGTGCGTaGATCCCTAAATGCTATTGC +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGNYHCA*IPKCYC
Trigger: GCAATAGCATTTAGGGATGCACGCACAGTGGTAATT...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAAATGAATCCAGCACAATaGAGGTGCTCGACAGAATGT +
Preference number: 4 (lower is better)
Translates to: KPHLATGRNINVGFSTIQMNPAQ*RCSTEC
Trigger: ACATTCTGTCGAGCACCTGCATTGTGCTGGATTCAT...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTTTGAGTGCTACATCCTaGTCTGAATCCTTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCLSATS*SESFVR
Trigger: TCTCACAAAGGATTCAGACCAGGATGTAGCACTCAA...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277575.5
CDS-3UTR CCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACTCTCTAAACATAATGTaGTCCCGAAATGTGCGGTTG +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNSLNIM*SRNVRL
Trigger: CAACCGCACATTTCGGGACCACATTATGTTTAGAGA...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGTCTCTAAACATAATGTaGTCCCGAAATGTGCGGTTG +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGSLNIM*SRNVRL
Trigger: CAACCGCACATTTCGGGACCACATTATGTTTAGAGA...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp AGAGCAAAGGCTCTGAAGAAAACAGCTCCATTCACGAGAGAAAGCAGTACTAATCCATGTTCTGTTATCTaGCAAGTAATCCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: RAKALKKTAPFTRESSTNPCSVI*QVIHWW
Trigger: CCACCAGTGGATTACTTGCCAGATAACAGAACATGG...ATTAGTACTGCTTTCTCTCGTGAATGGAGCTGTTTTCTTCAGAGCCTTTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGCCAGAGCTGTCCTCTTaGTTGAATCTCTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGPELSS*LNLFSL
Trigger: AAGTGAAAAGAGATTCAACCAAGAGGACAGCTCTGG...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp ATCTCAACAGGACCTGGAACGGTGGCTGGCCATGAATGCAAAATTGAAACCTCACTATTCTCACGACTTTaGGTCATCTTAAAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: ISTGPGTVAGHECKIETSLFSRL*VILKVW
Trigger: CCAAACTTTTAAGATGACCCAAAGTCGTGAGAATAG...TGAGGTTTCAATTTTGCATTCATGGCCAGCCACCGTTCCAGGTCCTGTTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTTTTGCCAGGGTCTCCTaGAAAAATTCTACAAGTTCT +
Preference number: 4 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCFARVS*KNSTSS
Trigger: AGAACTTGTAGAATTTTTTCAGGAGACCCTGGCAAA...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTTGGTTGGCAGCTGCGTaGTTATATTGCCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAIWLAAA*LYCLEL
Trigger: CAGTTCCAGGCAATATAATCACGCAGCTGCCAACCA...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTCTCCTGGGTCACATGTaGCCTTACTGTGTCTTTACC +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAILLGHM*PYCVFT
Trigger: GGTAAAGACACAGTAAGGTCACATGTGACCCAGGAG...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp CATTTCCCTGTATTCTTACTACTAACAGACAGGAGAGATGTGCGAGTTGTTTACATTTCCAGGTGCTTTTaGCGTTCCACAGCCACATTA +
Preference number: 4 (lower is better)
Translates to: HFPVFLLLTDRRDVRVVYISRCF*RSTATL
Trigger: TAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAAT...GTAAACAACTCGCACATCTCTCCTGTCTGTTAGTAGTAAGAATACAGGGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTCTTTCAATTTCCAGGTaGTTTTGCCGTTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLLSISR*FCRSTA
Trigger: GGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAG...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTGTCCATGATTGTCCCTaGGTCTCAGGTCTGTATGTA +
Preference number: 4 (lower is better)
Translates to: YIHLFLSFHLTCINSPVIVHDCP*VSGLYV
Trigger: TACATACAGACCTGAGACGCAGGGACAATCATGGAC...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTGTCCATGATTGTCCCTaGGTCTCAGGTCTGTATGTA +
Preference number: 4 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLVHDCP*VSGLYV
Trigger: TACATACAGACCTGAGACGCAGGGACAATCATGGAC...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACCAGACAGGAGAGATGTaGGAGTTGTTTACAATAGTA +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNQTGEM*ELFTIV
Trigger: TACTATTGTAAACAACTCGCACATCTCTCCTGTCTG...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp AGAGCAAAGGCTCTGAAGAAAACAGCTCCATTCACGAGAGAAAGCAGTACTAATAATTACCACTGTGCGTaGATCCCTAAATGCTATTGC +
Preference number: 4 (lower is better)
Translates to: RAKALKKTAPFTRESSTNNYHCA*IPKCYC
Trigger: GCAATAGCATTTAGGGATGCACGCACAGTGGTAATT...ATTAGTACTGCTTTCTCTCGTGAATGGAGCTGTTTTCTTCAGAGCCTTTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTGGATGTGATAAGCACTaGTGCACCTTTGGCCGTAAA +
Preference number: 4 (lower is better)
Translates to: YIHLFLSFHLTCINSPVIGCDKH*CTFGRK
Trigger: TTTACGGCCAAAGGTGCAGCAGTGCTTATCACATCC...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTGAGGGATCAGTAAGCTaGAACTTCTCCTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAIEGSVS*NFSCSE
Trigger: CTCAGAGCAGGAGAAGTTGCAGCTTACTGATCCCTC...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTCATACTCTCTTGGAGTaGCTAAATCTTTGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCHTLLE*LNLCQC
Trigger: ACACTGACAAAGATTTAGGCACTCCAAGAGAGTATG...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTAGCTTCCACCTGACCTaGATCAACAGCCCAGTTATT +
Preference number: 4 (lower is better)
Translates to: YIHLFLSFHLTCINSPVISFHLT*INSPVI
Trigger: AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCT...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGTCTGTTGAGGAGCACTaGAAGCAGCACCTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLSVEEH*KQHLSG
Trigger: TCCACTCAGGTGCTGCTTGCAGTGCTCCTCAACAGA...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp ACACAGCCATACAATGGAACAGCATTCAGCCCAGCAATAAAAAGGAAAGCAATTCGCATCCAGTTGTCTTaGCAGTTTCCCTTGGTAATT +
Preference number: 4 (lower is better)
Translates to: TQPYNGTAFSPAIKRKAIRIQLS*QFPLVI
Trigger: AATTACCAAGGGAAACTGGCAAGACAACTGGATGCG...AATTGCTTTCCTTTTTATTGCTGGGCTGAATGCTGTTCCATTGTATGGCTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACAGAACCCTCCTACATTaGTGGTGCAAATGTAAAATG +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNRTLLH*WCKCKM
Trigger: CATTTTACATTTGCACCAGCAATGTAGGAGGGTTCT...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp TTGAGAGTCCCACTGAGTATGGCGAAATTTGTAAATTTCGGCATCTTCTTCCGATACCAGACTGACAAATaGACAGGGATGTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: LRVPLSMAKFVNFGIFFRYQTDK*TGMLMS
Trigger: AGACATCAACATCCCTGTGCATTTGTCAGTCTGGTA...TCGGAAGAAGATGCCGAAATTTACAAATTTCGCCATACTCAGTGGGACTCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTATTTCAGCTCGCTCCTaGGCAAGTTTGAGTGCTACA +
Preference number: 4 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLISARS*ASLSAT
Trigger: TGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAAT...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGAGACTGAAGTTCAGGTaGAAGCTGCCCCAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLRLKFR*KLPQGL
Trigger: AAGCCCTTGGGGCAGCTTCCACCTGAACTTCAGTCT...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp TGCCTTAGTTTTCTCGTCTGTAAACTGGCAATTATAGTAGTACATACTTCGTTACAGTACAAGGGGGCTTaGGCGGCTGTAAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: CLSFLVCKLAIIVVHTSLQYKGA*AAVRFL
Trigger: GAGAAATCTTACAGCCGCCCAAGCCCCCTTGTACTG...TAACGAAGTATGTACTACTATAATTGCCAGTTTACAGACGAGAAAACTAAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTATATGGATATCCAGATaGACTGGCATCTTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLIWISR*TGIFCG
Trigger: GCCGCAGAAGATGCCAGTCCATCTGGATATCCATAT...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp GGTGCAAATGTAAAATGGTGCAGCTTCTTTGGAAAACAGTCTGGCAATTTCCTATTGACAGGGACACAGTaGGGAAAAGCAGTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: GANVKWCSFFGKQSGNFLLTGTQ*GKAVLL
Trigger: TAAAAGGACTGCTTTTCCCCACTGTGTCCCTGTCAA...TAGGAAATTGCCAGACTGTTTTCCAAAGAAGCTGCACCATTTTACATTTGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp TGCCTTAGTTTTCTCGTCTGTAAACTGGCAATTATAGTAGTACATACTTCGTTAGTCTCTATCTCTCTCTaGGACAGCCAACCACCTGTC +
Preference number: 4 (lower is better)
Translates to: CLSFLVCKLAIIVVHTSLVSISL*DSQPPV
Trigger: GACAGGTGGTTGGCTGTCCCAGAGAGAGATAGAGAC...TAACGAAGTATGTACTACTATAATTGCCAGTTTACAGACGAGAAAACTAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTAGGCTCCTTTCCCTCTaGTACCTCTTAAATGCCCAC +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAIRLLSL*YLLNAH
Trigger: GTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCT...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CAA 72 bp GAGAGACCTGAAGTGACTGCAACTATGAAAGTCTACTaGAGAGTCCCACTGAGTATGGCGAAATTTGTAAAT +
Preference number: 4 (lower is better)
Translates to: ERPEVTATMKVY*RVPLSMAKFVN
Trigger: ATTTACAAATTTCGCCATACTCAGTGGGACTCTCAAGTAGACTTTCATAGTTGCAGTCACTTCAGGTCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGCCCGAAATGTGCGGTTaGCATCCAGGTCTATTTGTC +
Preference number: 4 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLPEMCG*HPGLFV
Trigger: GACAAATAGACCTGGATGTCAACCGCACATTTCGGG...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACCGATCAAGGAAACACTaGAAAAACCATTTCATTGTG +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNRSRKH*KNHFIV
Trigger: CACAATGAAATGGTTTTTTCAGTGTTTCCTTGATCG...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAATTTGCCAGGGTCTCCTaGAAAAATTCTACAAGTTCT +
Preference number: 4 (lower is better)
Translates to: KPHLATGRNINVGFSTIQFARVS*KNSTSS
Trigger: AGAACTTGTAGAATTTTTTCAGGAGACCCTGGCAAA...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp ACACAGCCATACAATGGAACAGCATTCAGCCCAGCAATAAAAAGGAAAGCAATTCTCCTTCCTGATATTTaGAGTGGCGTTGCTATTTTG +
Preference number: 4 (lower is better)
Translates to: TQPYNGTAFSPAIKRKAILLPDI*SGVAIL
Trigger: CAAAATAGCAACGCCACTTCAAATATCAGGAAGGAG...AATTGCTTTCCTTTTTATTGCTGGGCTGAATGCTGTTCCATTGTATGGCTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACAATCCACTGGTGGAATaGTCAATTTTCCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNNPLVE*SIFHSL
Trigger: CAAAGAATGGAAAATTGATCATTCCACCAGTGGATT...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAACATACTTTTGTACCTTaGAAGTTTAAAGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: KPHLATGRNINVGFSTIQHTFVP*KFKAPP
Trigger: AGGTGGGGCTTTAAACTTTCAAGGTACAAAAGTATG...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCAATCTCCAACACTGATTaGCAGATTACAAAACACACT +
Preference number: 4 (lower is better)
Translates to: HLFLSFHLTCINSPVISPISNTD*QITKHT
Trigger: AGTGTGTTTTGTAATCTGTCAATCAGTGTTGGAGAT...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTGCTGTTGTCTCATTATaGCCATTCGGATTACACGCA +
Preference number: 4 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLAVVSL*PFGLHA
Trigger: TGCGTGTAATCCGAATGGTCATAATGAGACAACAGC...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTATTCCTTTTATGAGATaGTGGCCCCACTCTTCACCC +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAIIPFMR*WPHSSP
Trigger: GGGTGAAGAGTGGGGCCATCATCTCATAAAAGGAAT...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTATTTCCAGGTGCTTTTaGCGTTCCACAGCCACATTA +
Preference number: 4 (lower is better)
Translates to: YIHLFLSFHLTCINSPVIISRCF*RSTATL
Trigger: TAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAAT...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTCTTTCAATTTCCAGGTaGTTTTGCCGTTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAILSISR*FCRSTA
Trigger: GGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAG...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CATTTCCCTGTATTCTTACTACTAACAGACAGGAGAGATGTGCGAGTTGTTTACTATTTGAAGTGGCGTTaGTATTTTGGTTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HFPVFLLLTDRRDVRVVYYLKWR*YFGWQL
Trigger: CAGCTGCCAACCAAAATAGCAACGCCACTTCAAATA...GTAAACAACTCGCACATCTCTCCTGTCTGTTAGTAGTAAGAATACAGGGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAATTTAAAGCCCCACCTTaGAACAGGAAGAAACATCAA +
Preference number: 4 (lower is better)
Translates to: KPHLATGRNINVGFSTIQFKAPP*NRKKHQ
Trigger: TTGATGTTTCTTCCTGTTGCAAGGTGGGGCTTTAAA...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTAGCTTCCACCTGACCTaGATCAACAGCCCAGTTATT +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAISFHLT*INSPVI
Trigger: AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCT...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGCCCAGGGCTAAACTGTaGAGAAGCAAAGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLPRAKL*RSKAAV
Trigger: AACAGCAGCTTTGCTTCTCCACAGTTTAGCCCTGGG...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAATGGCAAGTAATCCACTaGTGGAATGATCAATTTTCC +
Preference number: 4 (lower is better)
Translates to: KPHLATGRNINVGFSTIQWQVIH*WNDQFS
Trigger: GGAAAATTGATCATTCCACCAGTGGATTACTTGCCA...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTCCATGTTCTGTTATCTaGCAAGTAATCCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLPCSVI*QVIHWW
Trigger: CCACCAGTGGATTACTTGCCAGATAACAGAACATGG...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTAATGGATTGTATAAATaGCCACCCTGGGACCTTCGT +
Preference number: 4 (lower is better)
Translates to: YIHLFLSFHLTCINSPVINGLYK*PPWDLR
Trigger: ACGAAGGTCCCAGGGTGGCCATTTATACAATCCATT...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp GGTGCAAATGTAAAATGGTGCAGCTTCTTTGGAAAACAGTCTGGCAATTTCCTAGTTGCTGTGTGGAAATaGAAATGGGGCTTAATTGCA +
Preference number: 4 (lower is better)
Translates to: GANVKWCSFFGKQSGNFLVAVWK*KWGLIA
Trigger: TGCAATTAAGCCCCATTTCCATTTCCACACAGCAAC...TAGGAAATTGCCAGACTGTTTTCCAAAGAAGCTGCACCATTTTACATTTGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGCTGTGTCTTTACCTCTaGACTCCCACTAGACTCAGC +
Preference number: 4 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLLCLYL*TPTRLS
Trigger: GCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAG...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTGCTACATCCTGGTCTaGATCCTTTGTGAGATAATC +
Preference number: 4 (lower is better)
Translates to: YIHLFLSFHLTCINSPVICYILV*ILCEII
Trigger: GATTATCTCACAAAGGATTCAGACCAGGATGTAGCA...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277575.5
CDS-3UTR TCA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTCTTGTTGGATACTTTTaGTGGACTAGAACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLLVGYF*WTRTWL
Trigger: GAGCCAAGTTCTAGTCCATCAAAAGTATCCAACAAG...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CACTTGAGTATACCCAAGAAGACCACAGAAAGAAGCAACATAGAGCAAATCAAAACACAAGATATTGCATaGGTGTCTGAGAACACTGAG +
Preference number: 4 (lower is better)
Translates to: HLSIPKKTTERSNIEQIKTQDIA*VSENTE
Trigger: CTCAGTGTTCTCAGACACTCATGCAATATCTTGTGT...TTTGATTTGCTCTATGTTGCTTCTTTCTGTGGTCTTCTTGGGTATACTCAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR TCA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTCTTCAGAAACATTACTaGGTGAAAGAAGCCAGACAC +
Preference number: 4 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLLQKHY*VKEARH
Trigger: GTGTCTGGCTTCTTTCACTCAGTAATGTTTCTGAAG...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAAACATATATGTTCAGTTaGTTTTTGACAGGGACACAG +
Preference number: 4 (lower is better)
Translates to: KPHLATGRNINVGFSTIQTYMFS*FLTGTQ
Trigger: CTGTGTCCCTGTCAAAAATCAACTGAACATATATGT...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp TTGAGAGTCCCACTGAGTATGGCGAAATTTGTAAATTTCGGCATCTTCTTCCGAAATGCACAGGGATGTTaGTGTCTTTTCAAAGATAAC +
Preference number: 4 (lower is better)
Translates to: LRVPLSMAKFVNFGIFFRNAQGC*CLFKDN
Trigger: GTTATCTTTGAAAAGACATCAACATCCCTGTGCATT...TCGGAAGAAGATGCCGAAATTTACAAATTTCGCCATACTCAGTGGGACTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTTGGAATAAGGATTGTTaGTTAACACCATATCTGTCT +
Preference number: 4 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCWNKDC*LTPYLS
Trigger: AGACAGATATGGTGTTAAGCAACAATCCTTATTCCA...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGTGGAATAAGGATTGTTaGTTAACACCATATCTGTCT +
Preference number: 4 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGWNKDC*LTPYLS
Trigger: AGACAGATATGGTGTTAAGCAACAATCCTTATTCCA...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGGGATGTGATAAGCACTaGTGCACCTTTGGCCGTAAA +
Preference number: 4 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLGCDKH*CTFGRK
Trigger: TTTACGGCCAAAGGTGCAGCAGTGCTTATCACATCC...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp GGTGCAAATGTAAAATGGTGCAGCTTCTTTGGAAAACAGTCTGGCAATTTCCTAGCAAGGGTCAAGATCTaGTCTTATATTAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GANVKWCSFFGKQSGNFLARVKI*SYISSS
Trigger: AGAGGAACTAATATAAGAGCAGATCTTGACCCTTGC...TAGGAAATTGCCAGACTGTTTTCCAAAGAAGCTGCACCATTTTACATTTGCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp CATTTCCCTGTATTCTTACTACTAACAGACAGGAGAGATGTGCGAGTTGTTTACTGGCAAGTAATCCACTaGTGGAATGATCAATTTTCC +
Preference number: 4 (lower is better)
Translates to: HFPVFLLLTDRRDVRVVYWQVIH*WNDQFS
Trigger: GGAAAATTGATCATTCCACCAGTGGATTACTTGCCA...GTAAACAACTCGCACATCTCTCCTGTCTGTTAGTAGTAAGAATACAGGGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp TTGAGAGTCCCACTGAGTATGGCGAAATTTGTAAATTTCGGCATCTTCTTCCGATTAAGCACCATTAAGTaGTTAGCCTTTCTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: LRVPLSMAKFVNFGIFFRLSTIK*LAFLSN
Trigger: ATTGGAGAGAAAGGCTAACCACTTAATGGTGCTTAA...TCGGAAGAAGATGCCGAAATTTACAAATTTCGCCATACTCAGTGGGACTCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTGTGTGGAAATGGAAATaGGGCTTAATTGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLVWKWK*GLIANW
Trigger: CCAGTTTGCAATTAAGCCCCATTTCCATTTCCACAC...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
3UTR CAA 72 bp AGCATAATGACCTTTATTAATCACTGCATCTGGTGTTaGCCAAATGGGAGAGAAACAATACTCAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SIMTFINHCIWC*PNGRETILKQP
Trigger: AGGCTGCTTGAGTATTGTTTCTCTCCCATTTGGCAAACACCAGATGCAGTGATTAATAAAGGTCATTATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR TCA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTCATACTTTTGTACCTTaGAAGTTTAAAGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLHTFVP*KFKAPP
Trigger: AGGTGGGGCTTTAAACTTTCAAGGTACAAAAGTATG...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp CAAGTAGAGAAGTTGTATGATCTTACTACACCACAGATAGTCATCATTCTACAGTATGCGATACACACTTaGGTATACCCAAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: QVEKLYDLTTPQIVIILQYAIHT*VYPRRP
Trigger: TGGTCTTCTTGGGTATACTCAAGTGTGTATCGCATA...CTGTAGAATGATGACTATCTGTGGTGTAGTAAGATCATACAACTTCTCTACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR TCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTATTCCAAATCATTCCTaGGTGACAACACTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAIIPNHS*VTTLCG
Trigger: TCCACACAGTGTTGTCACTCAGGAATGATTTGGAAT...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp CACTTGAGTATACCCAAGAAGACCACAGAAAGAAGCAACATAGAGCAAATCAAATCAACTTCAGAGAAATaGATGCTTTGCCTAGCTATC +
Preference number: 4 (lower is better)
Translates to: HLSIPKKTTERSNIEQIKSTSEK*MLCLAI
Trigger: GATAGCTAGGCAAAGCATTCATTTCTCTGAAGTTGA...TTTGATTTGCTCTATGTTGCTTCTTTCTGTGGTCTTCTTGGGTATACTCAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR GCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTCAGACAGGAGAGATGTaGGAGTTGTTTACAATAGTA +
Preference number: 4 (lower is better)
Translates to: YIHLFLSFHLTCINSPVIQTGEM*ELFTIV
Trigger: TACTATTGTAAACAACTCGCACATCTCTCCTGTCTG...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR GCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTAATTACCACTGTGCGTaGATCCCTAAATGCTATTGC +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAINYHCA*IPKCYC
Trigger: GCAATAGCATTTAGGGATGCACGCACAGTGGTAATT...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CACTTGAGTATACCCAAGAAGACCACAGAAAGAAGCAACATAGAGCAAATCAAAATTAATCACTGCATCTaGTGTTTGCCAAATGGGAGA +
Preference number: 4 (lower is better)
Translates to: HLSIPKKTTERSNIEQIKINHCI*CLPNGR
Trigger: TCTCCCATTTGGCAAACACCAGATGCAGTGATTAAT...TTTGATTTGCTCTATGTTGCTTCTTTCTGTGGTCTTCTTGGGTATACTCAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR CCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTACATACACATCACAGTaGCAAATTTCCTCACACATC +
Preference number: 4 (lower is better)
Translates to: YIHLFLSFHLTCINSPVITYTSQ*QISSHI
Trigger: GATGTGTGAGGAAATTTGCCACTGTGATGTGTATGT...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTAATCCACTGGTGGAATaGTCAATTTTCCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLNPLVE*SIFHSL
Trigger: CAAAGAATGGAAAATTGATCATTCCACCAGTGGATT...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTGTGTTCAAATGTGGATaGACAGATGCCTATATCTAT +
Preference number: 4 (lower is better)
Translates to: YIHLFLSFHLTCINSPVIVFKCG*TDAYIY
Trigger: ATAGATATAGGCATCTGTTCATCCACATTTGAACAC...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR TCA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTGCATATCTCCAACACTaGTTGACAGATTACAAAACA +
Preference number: 4 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLAYLQH*LTDYKT
Trigger: TGTTTTGTAATCTGTCAATCAGTGTTGGAGATATGC...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTATGGTCACAGCAGCATaGAAACAATCTACATGTCTA +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAIMVTAA*KQSTCL
Trigger: TAGACATGTAGATTGTTTTCATGCTGCTGTGACCAT...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp ATTCAAAGAGCTACTCTAAAGCATTTCCAGGTGGAACTTAGTACCTCTGCTCTAACCTTTATTAATCACTaGATCTGGTGTTTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: IQRATLKHFQVELSTSALTFINH*IWCLPN
Trigger: ATTTGGCAAACACCAGATGCAGTGATTAATAAAGGT...TAGAGCAGAGGTACTAAGTTCCACCTGGAAATGCTTTAGAGTAGCTCTTTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR GCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTGAATATTTCCTAACTTaGCCAACATCCGAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: YIHLFLSFHLTCINSPVIEYFLT*PTSEFL
Trigger: TAGAAACTCGGATGTTGGGCAAGTTAGGAAATATTC...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTCGTTGCTATTTTGGTTaGCAGCTGCGTGATTATATT +
Preference number: 4 (lower is better)
Translates to: DRRDVRVVYNSINTALAIRCYFG*QLRDYI
Trigger: AATATAATCACGCAGCTGCCAACCAAAATAGCAACG...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTATATCGTGCATGACTTaGAGGCTGTACTTTAAAAGT +
Preference number: 4 (lower is better)
Translates to: YIHLFLSFHLTCINSPVIISCMT*RLYFKS
Trigger: ACTTTTAAAGTACAGCCTCCAAGTCATGCACGATAT...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CACTTGAGTATACCCAAGAAGACCACAGAAAGAAGCAACATAGAGCAAATCAAATCTAGAGAAGATTACTaGGCAGTCTGTTTCAGTAAT +
Preference number: 4 (lower is better)
Translates to: HLSIPKKTTERSNIEQIKSREDY*AVCFSN
Trigger: ATTACTGAAACAGACTGCCCAGTAATCTTCTCTAGA...TTTGATTTGCTCTATGTTGCTTCTTTCTGTGGTCTTCTTGGGTATACTCAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR CCA 90 bp CAAGTAGAGAAGTTGTATGATCTTACTACACCACAGATAGTCATCATTCTACAGCTGGTGTTTGCCAAATaGGAGAGAAACAATACTCAA +
Preference number: 4 (lower is better)
Translates to: QVEKLYDLTTPQIVIILQLVFAK*ERNNTQ
Trigger: TTGAGTATTGTTTCTCTCCCATTTGGCAAACACCAG...CTGTAGAATGATGACTATCTGTGGTGTAGTAAGATCATACAACTTCTCTACTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR GCA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGTTTAAAGCCCCACCTTaGAACAGGAAGAAACATCAA +
Preference number: 4 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLFKAPP*NRKKHQ
Trigger: TTGATGTTTCTTCCTGTTGCAAGGTGGGGCTTTAAA...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGCGTTGCTATTTTGGTTaGCAGCTGCGTGATTATATT +
Preference number: 4 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLRCYFG*QLRDYI
Trigger: AATATAATCACGCAGCTGCCAACCAAAATAGCAACG...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CCA 90 bp TGCCTTAGTTTTCTCGTCTGTAAACTGGCAATTATAGTAGTACATACTTCGTTACGTTGCTATTTTGGTTaGCAGCTGCGTGATTATATT +
Preference number: 4 (lower is better)
Translates to: CLSFLVCKLAIIVVHTSLRCYFG*QLRDYI
Trigger: AATATAATCACGCAGCTGCCAACCAAAATAGCAACG...TAACGAAGTATGTACTACTATAATTGCCAGTTTACAGACGAGAAAACTAAGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CCA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGCCAATACTGTTAAGATaGCAGTTCTTCCTTGACTCA +
Preference number: 4 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLPILLR*QFFLDS
Trigger: TGAGTCAAGGAAGAACTGCCATCTTAACAGTATTGG...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGGAAAATACAATAATCTaGTGTCTGGGTTCCATCCAA +
Preference number: 4 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLENTII*CLGSIQ
Trigger: TTGGATGGAACCCAGACATCAGATTATTGTATTTTC...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR TCA 90 bp TGCCTTAGTTTTCTCGTCTGTAAACTGGCAATTATAGTAGTACATACTTCGTTAAGGAGAAAATCTTTGTaGCCTTTAGTTAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CLSFLVCKLAIIVVHTSLRRKSL*PLVKQR
Trigger: TCTCTGCTTAACTAAAGGTCACAAAGATTTTCTCCT...TAACGAAGTATGTACTACTATAATTGCCAGTTTACAGACGAGAAAACTAAGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR GCA 90 bp CAAGTAGAGAAGTTGTATGATCTTACTACACCACAGATAGTCATCATTCTACAGCATTGCAAACCTAATTaGTCTCTAGAGAAGATTACT +
Preference number: 4 (lower is better)
Translates to: QVEKLYDLTTPQIVIILQHCKPN*SLEKIT
Trigger: AGTAATCTTCTCTAGAGAGCAATTAGGTTTGCAATG...CTGTAGAATGATGACTATCTGTGGTGTAGTAAGATCATACAACTTCTCTACTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
3UTR CAA 72 bp TGCATCAACAGCCCAGTTATTTCACCAGAATTTTGTTaGCGTTTCAATGTAGTGTTTAGCTTTAATACACTG +
Preference number: 4 (lower is better)
Translates to: CINSPVISPEFC*RFNVVFSFNTL
Trigger: CAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGGTGAAATAACTGGGCTGTTGATGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
3UTR CAA 72 bp ATTAACATGATACAAAGTAACTTGCACAACATATATTaGGGACAGTACATGCAATCCAAAATGCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: INMIQSNLHNIY*GQYMQSKMQLL
Trigger: CAAGAGCTGCATTTTGGATTGCATGTACTGTCCCAAATATATGTTGTGCAAGTTACTTTGTATCATGTTAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609853.1
3UTR CAA 72 bp TTTCCTAAAAAGTTAAACATATGTCTGCACAAACACTaGTACACAAATGGTCACAGCAGCATGAAAACAATC +
Preference number: 4 (lower is better)
Translates to: FPKKLNICLHKH*YTNGHSSMKTI
Trigger: GATTGTTTTCATGCTGCTGTGACCATTTGTGTACAAGTGTTTGTGCAGACATATGTTTAACTTTTTAGGAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS GCA 90 bp GAAGCCGAGCCCGGGAACCAGGAAGTTCCCCGGCGCGACACCTCCTaGCGCCGCTATGGAAACGGCCCCCGCCTCCCAGGGCGGCTCGCC +
Preference number: 5 (lower is better)
Translates to: EAEPGNQEVPRRDTS*RRYGNGPRLPGRLA
Trigger: GGCGAGCCGCCCTGGGAGGCGGGGGCCGTTTCCATAGCGGCGGCAGGAGGTGTCGCGCCGGGGAACTTCCTGGTTCCCGGGCTCGGCTTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS GCA 90 bp CAGATCCGGCGCGGCGCGGCGCGGCGGCGGCGGCGGCTACCGCAGTaGCCTCCGCCCCATTGTTTCCCTTCCAAGAGGATCCCGGCGAAG +
Preference number: 5 (lower is better)
Translates to: QIRRGAARRRRRLPQ*PPPHCFPSKRIPAK
Trigger: CTTCGCCGGGATCCTCTTGGAAGGGAAACAATGGGGCGGAGGGCACTGCGGTAGCCGCCGCCGCCGCCGCGCCGCGCCGCGCCGGATCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606752.1
ENST00000609104.5
CDS GCA 90 bp ACGGAAGCGCCGCTGTCCAGCTCCGGGCCTGGCACGTTGTCGTACTaGGATGCAGTGGAGCCCCGCTTCCCGTCCTCAGCATCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: TEAPLSSSGPGTLSY*DAVEPRFPSSASRA
Trigger: GGCCCTGGATGCTGAGGACGGGAAGCGGGGCTCCACTGCATCGCAGTACGACAACGTGCCAGGCCCGGAGCTGGACAGCGGCGCTTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CCA 90 bp TTCCAGCGCCTCCTCCACGGAAGCGCCGCTGTCCAGCTCCGGGCCTaGCACGTTGTCGTACTGCGATGCAGTGGAGCCCCGCTTCCCGTC +
Preference number: 5 (lower is better)
Translates to: FQRLLHGSAAVQLRA*HVVVLRCSGAPLPV
Trigger: GACGGGAAGCGGGGCTCCACTGCATCGCAGTACGACAACGTGCCAGGCCCGGAGCTGGACAGCGGCGCTTCCGTGGAGGAGGCGCTGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS GCA 90 bp AGCGCCGCTGTCCAGCTCCGGGCCTGGCACGTTGTCGTACTGCGATaGAGTGGAGCCCCGCTTCCCGTCCTCAGCATCCAGGGCCTTCAT +
Preference number: 5 (lower is better)
Translates to: SAAVQLRAWHVVVLR*SGAPLPVLSIQGLH
Trigger: ATGAAGGCCCTGGATGCTGAGGACGGGAAGCGGGGCTCCACTGCATCGCAGTACGACAACGTGCCAGGCCCGGAGCTGGACAGCGGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS GCA 90 bp TGCCGCTGGCCAGCGGGCTCGGCCGGCCCACGCTCCTCTGTCCGTTaGTCAAGTGATGGACGCCCCAAGACTGAAGTTCAGGTGGAAGCT +
Preference number: 5 (lower is better)
Translates to: CRWPAGSAGPRSSVR*SSDGRPKTEVQVEA
Trigger: AGCTTCCACCTGAACTTCAGTCTTGGGGCGTCCATCACTTGAGCAACGGACAGAGGAGCGTGGGCCGGCCGAGCCCGCTGGCCAGCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CCA 90 bp CTCAGAGGAATACATGTCCTCAGTACGGTCCCGACTGCTAGGCTGTaGGCAGCGGACAGAGCTGGCGGTCCCGGGCGGCCGAGCAGATCC +
Preference number: 5 (lower is better)
Translates to: LRGIHVLSTVPTARL*AADRAGGPGRPSRS
Trigger: GGATCTGCTCGGCCGCCCGGGACCGCCAGCTCTGTCCGCTGCCCACAGCCTAGCAGTCGGGACCGTACTGAGGACATGTATTCCTCTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000606752.1
ENST00000609104.5
CDS TCA 90 bp CTTCCCGTCCTCAGCATCCAGGGCCTTCATCTTTGGCCGCACGTTTaGCACCCGCACCTCGGCAGGACCTGGGACGGTAACTGCGAGCGC +
Preference number: 5 (lower is better)
Translates to: LPVLSIQGLHLWPHV*HPHLGRTWDGNCER
Trigger: GCGCTCGCAGTTACCGTCCCAGGTCCTGCCGAGGTGCGGGTGTCAAACGTGCGGCCAAAGATGAAGGCCCTGGATGCTGAGGACGGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CCA 90 bp CGCTGTCCAGCTCCGGGCCTGGCACGTTGTCGTACTGCGATGCAGTaGAGCCCCGCTTCCCGTCCTCAGCATCCAGGGCCTTCATCTTTG +
Preference number: 5 (lower is better)
Translates to: RCPAPGLARCRTAMQ*SPASRPQHPGPSSL
Trigger: CAAAGATGAAGGCCCTGGATGCTGAGGACGGGAAGCGGGGCTCCACTGCATCGCAGTACGACAACGTGCCAGGCCCGGAGCTGGACAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS GCA 90 bp ACCCGCACCTCGGCAGGACCTGGGACGGTAACTGCGAGCGCGGGGTaGGCTGCTCGACCTTTGCCTTCCATGGTGTATTTGGCAGTTCTC +
Preference number: 5 (lower is better)
Translates to: TRTSAGPGTVTASAG*AARPLPSMVYLAVL
Trigger: GAGAACTGCCAAATACACCATGGAAGGCAAAGGTCGAGCAGCGCACCCCGCGCTCGCAGTTACCGTCCCAGGTCCTGCCGAGGTGCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS GCA 90 bp CACCTCGGCAGGACCTGGGACGGTAACTGCGAGCGCGGGGTGCGCTaGTCGACCTTTGCCTTCCATGGTGTATTTGGCAGTTCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: HLGRTWDGNCERGVR*STFAFHGVFGSSLC
Trigger: ACAGAGAGAACTGCCAAATACACCATGGAAGGCAAAGGTCGAGCAGCGCACCCCGCGCTCGCAGTTACCGTCCCAGGTCCTGCCGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CCA 90 bp CTCATCTTTAAGCTTTTTGCTCTCCTCCTCCACCGATTTCCGTCTTaGCGGCTGTGCTCTCTCGGGCGTCCCGGTCCTGCTCTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: LIFKLFALLLHRFPS*RLCSLGRPGPALGV
Trigger: CACCCCCAGAGCAGGACCGGGACGCCCGAGAGAGCACAGCCGCCAAGACGGAAATCGGTGGAGGAGGAGAGCAAAAAGCTTAAAGATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCGGCTCAGCTGTGCTGTaGTCCCAGGTGCCCCACCTT +
Preference number: 5 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSGSAVL*SQVPHL
Trigger: AAGGTGGGGCACCTGGGACAACAGCACAGCTGAGCC...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS TCA 90 bp AGAGCCAGGGTCTCCATCGACTCTACACAGACGACTCCCAGCCCCTaGGCATGCAGCCCTCAGGAAGCTGAGATTGTCAAGGACAGCCAT +
Preference number: 5 (lower is better)
Translates to: RARVSIDSTQTTPSP*ACSPQEAEIVKDSH
Trigger: ATGGCTGTCCTTGACAATCTCAGCTTCCTGAGGGCTGCATGCTCAGGGGCTGGGAGTCGTCTGTGTAGAGTCGATGGAGACCCTGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443016.1
CDS-3UTR CAA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGCCACCGATTTCCGTCTaGGCGGCTGTGCTCTCTCGG +
Preference number: 5 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWPPISV*AAVLSR
Trigger: CCGAGAGAGCACAGCCGCCAAGACGGAAATCGGTGG...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCTCTTTGGCCGCACGTTaGACACCCGCACCTCGGCAG +
Preference number: 5 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCSLAAR*TPAPRQ
Trigger: CTGCCGAGGTGCGGGTGTCAAACGTGCGGCCAAAGA...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCTCCGGGCCTGGCACGTaGTCGTACTGCGATGCAGTG +
Preference number: 5 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCSGPGT*SYCDAV
Trigger: CACTGCATCGCAGTACGACAACGTGCCAGGCCCGGA...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGTCCGGGCCTGGCACGTaGTCGTACTGCGATGCAGTG +
Preference number: 5 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWSGPGT*SYCDAV
Trigger: CACTGCATCGCAGTACGACAACGTGCCAGGCCCGGA...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGCCACCGATTTCCGTCTaGGCGGCTGTGCTCTCTCGG +
Preference number: 5 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTEPPISV*AAVLSR
Trigger: CCGAGAGAGCACAGCCGCCAAGACGGAAATCGGTGG...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp AGGGCACTCAAACATCAGCTGCGACTGCCCCTGCGAGTCCTTCGGAGGCTCCTTGACTACAATGCAGACTaGACAACCTCCAGTCCACTC +
Preference number: 5 (lower is better)
Translates to: RALKHQLRLPLRVLRRLLDYNAD*TTSSPL
Trigger: GAGTGGACTGGAGGTTGTCAAGTCTGCATTGTAGTC...AAGGAGCCTCCGAAGGACTCGCAGGGGCAGTCGCAGCTGATGTTTGAGTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS CCA 90 bp GGTAGGCTGGAGGCGGGGGCCCTGAATATGGATATCCAGATGGACTaGCATCTTCTGCGGCCGGTGAAGCTTTATATCTCACGGGACTAT +
Preference number: 5 (lower is better)
Translates to: GRLEAGALNMDIQMD*HLLRPVKLYISRDY
Trigger: ATAGTCCCGTGAGATATAAAGCTTCACCGGCCGCAGAAGATGCCAGTCCATCTGGATATCCATATTCAGGGCCCCCGCCTCCAGCCTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS GCA 90 bp CCAGTCCCACATTTCCAAGGCGAGGCTTCCCATGATAATCAGAAGTaGAAGAGAGCCAGGGTCTCCATCGACTCTACACAGACGACTCCC +
Preference number: 5 (lower is better)
Translates to: PVPHFQGEASHDNQK*KRARVSIDSTQTTP
Trigger: GGGAGTCGTCTGTGTAGAGTCGATGGAGACCCTGGCTCTCTTGCACTTCTGATTATCATGGGAAGCCTCGCCTTGGAAATGTGGGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443016.1
CDS-3UTR CAA 90 bp CCTTGGCTGGCATATCTCCCAGGCCAGCACTCTTGTGACTCTGCCCCCTACATGTCCCGAAATGTGCGGTaGACATCCAGGTCTATTTGT +
Preference number: 5 (lower is better)
Translates to: PWLAYLPGQHSCDSAPYMSRNVR*TSRSIC
Trigger: ACAAATAGACCTGGATGTCAACCGCACATTTCGGGA...CATGTAGGGGGCAGAGTCACAAGAGTGCTGGCCTGGGAGATATGCCAGCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACAGGGCCTGAGAAGAGTTaGACCAGGGCCCAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTGPEKS*TRAQKA
Trigger: TGCCTTCTGGGCCCTGGTCAAACTCTTCTCAGGCCC...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp CCTTGGCTGGCATATCTCCCAGGCCAGCACTCTTGTGACTCTGCCCCCTACATGGCCCCAAGGGCTTCTTaGGATATTCATCCTCTTTAC +
Preference number: 5 (lower is better)
Translates to: PWLAYLPGQHSCDSAPYMAPRAS*DIHPLY
Trigger: GTAAAGAGGATGAATATCCAAAGAAGCCCTTGGGGC...CATGTAGGGGGCAGAGTCACAAGAGTGCTGGCCTGGGAGATATGCCAGCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGAGACAGGAGAATCGCTaGAACTTGGGAGGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWRQENR*NLGGRG
Trigger: GCCTCTGCCTCCCAAGTTCAAGCGATTCTCCTGTCT...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS CCA 90 bp AACAGGGAGGACTTCTATTCGACTAGACGGCAGTACAAGGGGGCTTaGGCGGCTGTAAGATTTCTCCGGAGAAGCACTGACGGAAAGAGT +
Preference number: 5 (lower is better)
Translates to: NREDFYSTRRQYKGA*AAVRFLRRSTDGKS
Trigger: ACTCTTTCCGTCAGTGCTTCTCCGGAGAAATCTTACAGCCGCCCAAGCCCCCTTGTACTGCCGTCTAGTCGAATAGAAGTCCTCCCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CCA 90 bp TTTAGCAAGTACACGTCAAATCTCACAGCAACACTGACTCTTGGATaGAAAGCCCGTCCCGATTCCTGTAGTGGTAGGCTGGAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: FSKYTSNLTATLTLG*KARPDSCSGRLEAG
Trigger: CCCCGCCTCCAGCCTACCACTACAGGAATCGGGACGGGCTTTCCATCCAAGAGTCAGTGTTGCTGTGAGATTTGACGTGTACTTGCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGCGCTCCTGGGCAAGTTaGAGTGCTACATCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTERSWAS*SATSWS
Trigger: AGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCG...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCGAAGCAAAGCTGCTGTaGGCAGTAGGGAAGTGTTTG +
Preference number: 5 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSEAKLL*AVGKCL
Trigger: CAAACACTTCCCTACTGCCAACAGCAGCTTTGCTTC...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGTGGGGTTTCACCATGTaGGCCAGGATGGTCTCGATT +
Preference number: 5 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWWGFTM*ARMVSI
Trigger: AATCGAGACCATCCTGGCCAACATGGTGAAACCCCA...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS CCA 90 bp CTGTCCGTTGCTCAAGTGATGGACGCCCCAAGACTGAAGTTCAGGTaGAAGCTGCCCCAAGGGCTTCTTTGGATATTCATCCTCTTTACC +
Preference number: 5 (lower is better)
Translates to: LSVAQVMDAPRLKFR*KLPQGLLWIFILFT
Trigger: GGTAAAGAGGATGAATATCCAAAGAAGCCCTTGGGGCAGCTTCCACCTGAACTTCAGTCTTGGGGCGTCCATCACTTGAGCAACGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCAGTGGCGTTGCTATTTaGGTTGGCAGCTGCGTGATT +
Preference number: 5 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCSGVAI*VGSCVI
Trigger: AATCACGCAGCTGCCAACCAAAATAGCAACGCCACT...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACTCTTTGGCCGCACGTTaGACACCCGCACCTCGGCAG +
Preference number: 5 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNSLAAR*TPAPRQ
Trigger: CTGCCGAGGTGCGGGTGTCAAACGTGCGGCCAAAGA...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGGCAGTACAAGGGGGCTaGGGCGGCTGTAAGATTTCT +
Preference number: 5 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEAVQGG*GGCKIS
Trigger: AGAAATCTTACAGCCGCCCAAGCCCCCTTGTACTGC...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGTTTGGTGACCCTGAATaGCCCGAATATCCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTEFGDPE*PEYPPA
Trigger: TGCTGGGGGATATTCGGGCAATTCAGGGTCACCAAA...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCTGTCTTTCTATATGCTaGTCCTGTCAGGCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSCLSIC*SCQAQL
Trigger: CAGCTGAGCCTGACAGGACAAGCATATAGAAAGACA...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp CCTTGGCTGGCATATCTCCCAGGCCAGCACTCTTGTGACTCTGCCCCCTACATGAATGGTGCAGCTTCTTaGGAAAACAGTCTGGCAATT +
Preference number: 5 (lower is better)
Translates to: PWLAYLPGQHSCDSAPYMNGAAS*ENSLAI
Trigger: AATTGCCAGACTGTTTTCCAAAGAAGCTGCACCATT...CATGTAGGGGGCAGAGTCACAAGAGTGCTGGCCTGGGAGATATGCCAGCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS CCA 90 bp ATGAGGTCTCCTGGAAGGATTCAGTTGAGTCCCAGGGCTAAACTGTaGAGAAGCAAAGCTGCTGTTGGCAGTAGGGAAGTGTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: MRSPGRIQLSPRAKL*RSKAAVGSREVFGR
Trigger: TCTCCCAAACACTTCCCTACTGCCAACAGCAGCTTTGCTTCTCCACAGTTTAGCCCTGGGACTCAACTGAATCCTTCCAGGAGACCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCAGGGCCTGAGAAGAGTTaGACCAGGGCCCAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: HLFLSFHLTCINSPVISPGPEKS*TRAQKA
Trigger: TGCCTTCTGGGCCCTGGTCAAACTCTTCTCAGGCCC...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCAAGCTGCGTGATTATATaGCCTGGAACTGTCCTGTGG +
Preference number: 5 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPSCVII*PGTVLW
Trigger: CCACAGGACAGTTCCAGGCAATATAATCACGCAGCT...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGAGTGGCGTTGCTATTTaGGTTGGCAGCTGCGTGATT +
Preference number: 5 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTESGVAI*VGSCVI
Trigger: AATCACGCAGCTGCCAACCAAAATAGCAACGCCACT...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTCCAGGGCCTTCATCTTaGGCCGCACGTTTGACACCC +
Preference number: 5 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCPGPSS*AARLTP
Trigger: GGGTGTCAAACGTGCGGCCAAAGATGAAGGCCCTGG...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAATCCGGGCCTGGCACGTaGTCGTACTGCGATGCAGTG +
Preference number: 5 (lower is better)
Translates to: KPHLATGRNINVGFSTIQSGPGT*SYCDAV
Trigger: CACTGCATCGCAGTACGACAACGTGCCAGGCCCGGA...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCCTGGAAGGATTCAGTaGAGTCCCAGGGCTAAACTG +
Preference number: 5 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEPGRIQ*SPRAKL
Trigger: CAGTTTAGCCCTGGGACTCAACTGAATCCTTCCAGG...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCACCAGGTGTCTGTTCTaGTGCTTGCATCCTAAGGGA +
Preference number: 5 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSTRCLF*CLHPKG
Trigger: TCCCTTAGGATGCAAGCACAAGAACAGACACCTGGT...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS TCA 90 bp TCTCTCTCGTCTTTAGCAAGTACACGTCAAATCTCACAGCAACACTaGCTCTTGGATGGAAAGCCCGTCCCGATTCCTGTAGTGGTAGGC +
Preference number: 5 (lower is better)
Translates to: SLSSLASTRQISQQH*LLDGKPVPIPVVVG
Trigger: GCCTACCACTACAGGAATCGGGACGGGCTTTCCATCCAAGAGTCAGTGTTGCTGTGAGATTTGACGTGTACTTGCTAAAGACGAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS TCA 90 bp TACACAGACGACTCCCAGCCCCTGAGCATGCAGCCCTCAGGAAGCTaGGATTGTCAAGGACAGCCATTCCAAATTAGCATTTTGTTGACA +
Preference number: 5 (lower is better)
Translates to: YTDDSQPLSMQPSGS*DCQGQPFQISILLT
Trigger: TGTCAACAAAATGCTAATTTGGAATGGCTGTCCTTGACAATCTCAGCTTCCTGAGGGCTGCATGCTCAGGGGCTGGGAGTCGTCTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443016.1
CDS-3UTR CAA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCTCATCTTTAAGCTTTTaGCTCTCCTCCTCCACCGAT +
Preference number: 5 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCSSLSF*LSSSTD
Trigger: ATCGGTGGAGGAGGAGAGCAAAAAGCTTAAAGATGA...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACAAGCTGCGTGATTATATaGCCTGGAACTGTCCTGTGG +
Preference number: 5 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTSCVII*PGTVLW
Trigger: CCACAGGACAGTTCCAGGCAATATAATCACGCAGCT...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGACGGTTTATTCCATTaGGGCACAAACTCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTEDGLFH*GTNSFL
Trigger: CAGGAAGGAGTTTGTGCCCAAATGGAATAAACCGTC...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCACCTTCCATGGTGTATTaGGCAGTTCTCTCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPPSMVY*AVLSVA
Trigger: AGCTACAGAGAGAACTGCCAAATACACCATGGAAGG...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGGAAGCAAAGCTGCTGTaGGCAGTAGGGAAGTGTTTG +
Preference number: 5 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEEAKLL*AVGKCL
Trigger: CAAACACTTCCCTACTGCCAACAGCAGCTTTGCTTC...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGAGTATTTTGGTAAATaGCCACGGCTAGCATCTCGG +
Preference number: 5 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTEEYFGK*PRLASR
Trigger: CCGAGATGCTAGCCGTGGCAATTTACCAAAATACTC...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGAGGACAGAAATGGATaGTATAAATGGCCACCCTGG +
Preference number: 5 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTEEDRNG*YKWPPW
Trigger: CCAGGGTGGCCATTTATACAATCCATTTCTGTCCTC...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGGTGCCCTCCGCCCCATaGTTTCCCTTCCAAGAGGAT +
Preference number: 5 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGVPSAP*FPFQED
Trigger: ATCCTCTTGGAAGGGAAACAATGGGGCGGAGGGCAC...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp CGGAGGCTCCTTTCCCTCTGGTACCTCTTAAATGCCCACACCTTACAGCAGAGCACTATGAAAGTCTACTaGAGAGTCCCACTGAGTATG +
Preference number: 5 (lower is better)
Translates to: RRLLSLWYLLNAHTLQQSTMKVY*RVPLSM
Trigger: CATACTCAGTGGGACTCTCAAGTAGACTTTCATAGT...GCTCTGCTGTAAGGTGTGGGCATTTAAGAGGTACCAGAGGGAAAGGAGCCTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCAGAGACTCTCCCTCTGTaGAGGAGCACTGCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: HLFLSFHLTCINSPVISPETLPL*RSTASS
Trigger: GCTGCTTGCAGTGCTCCTCAACAGAGGGAGAGTCTC...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGTGCTCTCTCCCCCTCTaGTCTTTCTATATGCTTGTC +
Preference number: 5 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTECSLPL*SFYMLV
Trigger: GACAAGCATATAGAAAGACAAGAGGGGGAGAGAGCA...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTCCCAGGTGCCCCACCTaGGCTGGCATATCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: YIHLFLSFHLTCINSPVIPRCPT*AGISPR
Trigger: CCTGGGAGATATGCCAGCCAAGGTGGGGCACCTGGG...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACCGCTCCTGGGCAAGTTaGAGTGCTACATCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNRSWAS*SATSWS
Trigger: AGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCG...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGTCCCGAAATGTGCGGTaGACATCCAGGTCTATTTGT +
Preference number: 5 (lower is better)
Translates to: SNHTANAVSVAAPHEYCESRNVR*TSRSIC
Trigger: ACAAATAGACCTGGATGTCAACCGCACATTTCGGGA...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTCCACCGATTTCCGTCTaGGCGGCTGTGCTCTCTCGG +
Preference number: 5 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLPPISV*AAVLSR
Trigger: CCGAGAGAGCACAGCCGCCAAGACGGAAATCGGTGG...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGTCATCTTTAAGCTTTTaGCTCTCCTCCTCCACCGAT +
Preference number: 5 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTESSLSF*LSSSTD
Trigger: ATCGGTGGAGGAGGAGAGCAAAAAGCTTAAAGATGA...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACGCAGTACAAGGGGGCTaGGGCGGCTGTAAGATTTCT +
Preference number: 5 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNAVQGG*GGCKIS
Trigger: AGAAATCTTACAGCCGCCCAAGCCCCCTTGTACTGC...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TCCAGGTGGAACTTAGTACCTCTGCTCTACCAGTTCCCAGCTATCCCCTATGATCACTGCATCTGGTGTTaGCCAAATGGGAGAGAAACA +
Preference number: 5 (lower is better)
Translates to: SRWNLVPLLYQFPAIPYDHCIWC*PNGRET
Trigger: TGTTTCTCTCCCATTTGGCAAACACCAGATGCAGTG...ATCATAGGGGATAGCTGGGAACTGGTAGAGCAGAGGTACTAAGTTCCACCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR CAA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGATTACACGCATCCAGTaGTCTTGCCAGTTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEITRIQ*SCQFPL
Trigger: CAAGGGAAACTGGCAAGACAACTGGATGCGTGTAAT...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGATATTTGAAGTGGCGTaGCTATTTTGGTTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTEIFEVA*LFWLAA
Trigger: AGCTGCCAACCAAAATAGCAACGCCACTTCAAATAT...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTCCTGGAAGGATTCAGTaGAGTCCCAGGGCTAAACTG +
Preference number: 5 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCPGRIQ*SPRAKL
Trigger: CAGTTTAGCCCTGGGACTCAACTGAATCCTTCCAGG...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCAGGAGTGCCTAAATCTTaGTCAGTGTTTTGGTATCTG +
Preference number: 5 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPGVPKS*SVFWYL
Trigger: CAGATACCAAAACACTGACAAAGATTTAGGCACTCC...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGCGAAGTCATACTCTCTaGGAGTGCCTAAATCTTTGT +
Preference number: 5 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTERSHTL*ECLNLC
Trigger: ACAAAGATTTAGGCACTCCAAGAGAGTATGACTTCG...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp AGGACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCGAAGTCATACTCTCTaGGAGTGCCTAAATCTTTGT +
Preference number: 5 (lower is better)
Translates to: RTEMDCINGHPGTFVGRSRSHTL*ECLNLC
Trigger: ACAAAGATTTAGGCACTCCAAGAGAGTATGACTTCG...GCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACATCCAGAGCTGTCCTCTaGGTTGAATCTCTTTTCACT +
Preference number: 5 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTSRAVL*VESLFT
Trigger: AGTGAAAAGAGATTCAACCAAGAGGACAGCTCTGGA...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp TACTGTGTCTTTACCTCTGGACTCCCACTAGACTCAGCTCCACATCGCTCCTGGTCTTGCCAGTTTCCCTaGGTAATTAGTTCTCAATCA +
Preference number: 5 (lower is better)
Translates to: YCVFTSGLPLDSAPHRSWSCQFP*VISSQS
Trigger: TGATTGAGAACTAATTACCAAGGGAAACTGGCAAGA...CCAGGAGCGATGTGGAGCTGAGTCTAGTGGGAGTCCAGAGGTAAAGACACAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS TCA 90 bp TTCCTGATATTTGAAGTGGCGTTGCTATTTTGGTTGGCAGCTGCGTaGTTATATTGCCTGGAACTGTCCTGTGGACCCGATGGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: FLIFEVALLFWLAAA*LYCLELSCGPDGSF
Trigger: AAAACTCCCATCGGGTCCACAGGACAGTTCCAGGCAATATAATCACGCAGCTGCCAACCAAAATAGCAACGCCACTTCAAATATCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS TCA 90 bp CTGAGACGTCTGACGGTTTATTCCATTTGGGCACAAACTCCTTCCTaGTATTTGAAGTGGCGTTGCTATTTTGGTTGGCAGCTGCGTGAT +
Preference number: 5 (lower is better)
Translates to: LRRLTVYSIWAQTPS*YLKWRCYFGWQLRD
Trigger: ATCACGCAGCTGCCAACCAAAATAGCAACGCCACTTCAAATATCAGGAAGGAGTTTGTGCCCAAATGGAATAAACCGTCAGACGTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS TCA 90 bp GCCTGGGTGACAGGGCAAGACTCCGTTCATGACTGGAAATGGGTCTaGATGTTGTCCCAATCAGATATTAAACCAAAATCTGCTGTCCAA +
Preference number: 5 (lower is better)
Translates to: AWVTGQDSVHDWKWV*MLSQSDIKPKSAVQ
Trigger: TTGGACAGCAGATTTTGGTTTAATATCTGATTGGGACAACATTCAGACCCATTTCCAGTCATGAACGGAGTCTTGCCCTGTCACCCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606752.1
CDS CCA 90 bp CCTTCTCGTCCTCTGTCATATTTAGCAACTATTTCAGCTCGCTCCTaGGCAAGTTTGAGTGCTACATCCTGGTCTGAATCCTTTGTGAGA +
Preference number: 5 (lower is better)
Translates to: PSRPLSYLATISARS*ASLSATSWSESFVR
Trigger: TCTCACAAAGGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAGTTGCTAAATATGACAGAGGACGAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277575.5
CDS CCA 90 bp CCTTCTCGTCCTCTGTCATATTTAGCAACTATTTCAGCTCGCTCCTaGGCAAGTTTGAGTGCTACATCCTGGTCTGAATCTTCCTTCACT +
Preference number: 5 (lower is better)
Translates to: PSRPLSYLATISARS*ASLSATSWSESSFT
Trigger: AGTGAAGGAAGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAGTTGCTAAATATGACAGAGGACGAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379237.6
CDS CCA 90 bp CCTTCTCGTCCTCTGTCATATTTAGCAACTATTTCAGCTCGCTCCTaGGCAAGTTTGAGTGCTACATCCTGGTCTGAATTCATGACTGGA +
Preference number: 5 (lower is better)
Translates to: PSRPLSYLATISARS*ASLSATSWSEFMTG
Trigger: TCCAGTCATGAATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAGTTGCTAAATATGACAGAGGACGAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGATAATCAGTCTGGCCTaGGGAATTAACAACAGCTTC +
Preference number: 5 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEIISLA*GINNSF
Trigger: GAAGCTGTTGTTAATTCCCAAGGCCAGACTGATTAT...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277575.5
CDS-3UTR CAA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCATTGAGAATCCAAGTGTaGCTTAAGCTTGGACAGAAA +
Preference number: 5 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPLRIQV*LKLGQK
Trigger: TTTCTGTCCAAGCTTAAGCAACACTTGGATTCTCAA...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGGGATCAGTAAGCTGCACTTGTGTAGATTTCTaGAGAATCCAAGTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: LVWLPHMSTVSTEGSVSCTCVDF*RIQVLL
Trigger: AAGCAACACTTGGATTCTCAAGAAATCTACACAAGT...GCAGCTTACTGATCCCTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGATATTTGAAGTGGCGTaGCTATTTTGGTTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: SNHTANAVSVAAPHEYCEIFEVA*LFWLAA
Trigger: AGCTGCCAACCAAAATAGCAACGCCACTTCAAATAT...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGTCTTTGGCCGCACGTTaGACACCCGCACCTCGGCAG +
Preference number: 5 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLSLAAR*TPAPRQ
Trigger: CTGCCGAGGTGCGGGTGTCAAACGTGCGGCCAAAGA...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCGAAGTCATACTCTCTaGGAGTGCCTAAATCTTTGT +
Preference number: 5 (lower is better)
Translates to: SNHTANAVSVAAPHEYCERSHTL*ECLNLC
Trigger: ACAAAGATTTAGGCACTCCAAGAGAGTATGACTTCG...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TCCAGGTGGAACTTAGTACCTCTGCTCTACCAGTTCCCAGCTATCCCCTATGATATATGCGATACACACTaGAGTATACCCAAGAAGACC +
Preference number: 5 (lower is better)
Translates to: SRWNLVPLLYQFPAIPYDICDTH*SIPKKT
Trigger: GGTCTTCTTGGGTATACTCAAGTGTGTATCGCATAT...ATCATAGGGGATAGCTGGGAACTGGTAGAGCAGAGGTACTAAGTTCCACCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR CAA 90 bp TGCAACTTCTCCTGCTCTGAGATTCGCAAGAGTCAGACCAGAACAAAGGGCACAGGAATATTTCCTAACTaGCCCAACATCCGAGTTTCT +
Preference number: 5 (lower is better)
Translates to: CNFSCSEIRKSQTRTKGTGIFPN*PNIRVS
Trigger: AGAAACTCGGATGTTGGGCAAGTTAGGAAATATTCC...TGTGCCCTTTGTTCTGGTCTGACTCTTGCGAATCTCAGAGCAGGAGAAGTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGAATTTCCAGGTGCTTTaGCCGTTCCACAGCCACATT +
Preference number: 5 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGNFQVL*PFHSHI
Trigger: AATGTGGCTGTGGAACGGCAAAAGCACCTGGAAATT...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp GACAGAAATGGATTGTATAAATGGCCACCCTGGGACCTTCGTGGGGAGAAGCCAAGCATTTTCAGCCATTaGGTAGTTCTTTCAATTTCC +
Preference number: 5 (lower is better)
Translates to: DRNGLYKWPPWDLRGEKPSIFSH*VVLSIS
Trigger: GGAAATTGAAAGAACTACCAAATGGCTGAAAATGCT...TGGCTTCTCCCCACGAAGGTCCCAGGGTGGCCATTTATACAATCCATTTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACTCCCGAAATGTGCGGTaGACATCCAGGTCTATTTGT +
Preference number: 5 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNSRNVR*TSRSIC
Trigger: ACAAATAGACCTGGATGTCAACCGCACATTTCGGGA...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TGCCTTAGTTTTCTCGTCTGTAAACTGGCAATTATAGTAGTACATACTTCGTTAGGGCCTGAGAAGAGTTaGACCAGGGCCCAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: CLSFLVCKLAIIVVHTSLGPEKS*TRAQKA
Trigger: TGCCTTCTGGGCCCTGGTCAAACTCTTCTCAGGCCC...TAACGAAGTATGTACTACTATAATTGCCAGTTTACAGACGAGAAAACTAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp ACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGCACTGAGACTTGTGTAGATTTCTaGAGAATCCAAGTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: TLLMQLVWLPHMSTVSTETCVDF*RIQVLL
Trigger: AAGCAACACTTGGATTCTCAAGAAATCTACACAAGT...CTCAGTGCTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp CATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCACCACTGGAAGGTCTAACTTaGCCCGCTTTAGTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: HLFLSFHLTCINSPVISPLEGLT*PALVLS
Trigger: TGACAGAACTAAAGCGGGCAAAGTTAGACCTTCCAG...TGGTGAAATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGCCTTCCATGGTGTATTaGGCAGTTCTCTCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGPSMVY*AVLSVA
Trigger: AGCTACAGAGAGAACTGCCAAATACACCATGGAAGG...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp CATTTCCCTGTATTCTTACTACTAACAGACAGGAGAGATGTGCGAGTTGTTTACTGCGCTGCTCGACCTTaGCCTTCCATGGTGTATTTG +
Preference number: 5 (lower is better)
Translates to: HFPVFLLLTDRRDVRVVYCAARP*PSMVYL
Trigger: CAAATACACCATGGAAGGCAAAGGTCGAGCAGCGCA...GTAAACAACTCGCACATCTCTCCTGTCTGTTAGTAGTAAGAATACAGGGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp GGTGCAAATGTAAAATGGTGCAGCTTCTTTGGAAAACAGTCTGGCAATTTCCTATGCGCTGCTCGACCTTaGCCTTCCATGGTGTATTTG +
Preference number: 5 (lower is better)
Translates to: GANVKWCSFFGKQSGNFLCAARP*PSMVYL
Trigger: CAAATACACCATGGAAGGCAAAGGTCGAGCAGCGCA...TAGGAAATTGCCAGACTGTTTTCCAAAGAAGCTGCACCATTTTACATTTGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGCCAGGGCCTTCATCTTaGGCCGCACGTTTGACACCC +
Preference number: 5 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLPGPSS*AARLTP
Trigger: GGGTGTCAAACGTGCGGCCAAAGATGAAGGCCCTGG...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TGCCTTAGTTTTCTCGTCTGTAAACTGGCAATTATAGTAGTACATACTTCGTTACCAGGGCCTTCATCTTaGGCCGCACGTTTGACACCC +
Preference number: 5 (lower is better)
Translates to: CLSFLVCKLAIIVVHTSLPGPSS*AARLTP
Trigger: GGGTGTCAAACGTGCGGCCAAAGATGAAGGCCCTGG...TAACGAAGTATGTACTACTATAATTGCCAGTTTACAGACGAGAAAACTAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAAGAAGCAAAGCTGCTGTaGGCAGTAGGGAAGTGTTTG +
Preference number: 5 (lower is better)
Translates to: KPHLATGRNINVGFSTIQEAKLL*AVGKCL
Trigger: CAAACACTTCCCTACTGCCAACAGCAGCTTTGCTTC...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp ACACAGCCATACAATGGAACAGCATTCAGCCCAGCAATAAAAAGGAAAGCAATTCCTGGAAGGATTCAGTaGAGTCCCAGGGCTAAACTG +
Preference number: 5 (lower is better)
Translates to: TQPYNGTAFSPAIKRKAIPGRIQ*SPRAKL
Trigger: CAGTTTAGCCCTGGGACTCAACTGAATCCTTCCAGG...AATTGCTTTCCTTTTTATTGCTGGGCTGAATGCTGTTCCATTGTATGGCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp AGTAACCACACTGCTAATGCAGTTAGTGTGGCTGCCCCACATGAGTACTGTGAGAGCATTTTCAGCCATTaGGTAGTTCTTTCAATTTCC +
Preference number: 5 (lower is better)
Translates to: SNHTANAVSVAAPHEYCESIFSH*VVLSIS
Trigger: GGAAATTGAAAGAACTACCAAATGGCTGAAAATGCT...CTCACAGTACTCATGTGGGGCAGCCACACTAACTGCATTAGCAGTGTGGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAACTGGAAGGTCTAACTTaGCCCGCTTTAGTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: KPHLATGRNINVGFSTIQLEGLT*PALVLS
Trigger: TGACAGAACTAAAGCGGGCAAAGTTAGACCTTCCAG...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp CATTTCCCTGTATTCTTACTACTAACAGACAGGAGAGATGTGCGAGTTGTTTACAGTGGCGTTGCTATTTaGGTTGGCAGCTGCGTGATT +
Preference number: 5 (lower is better)
Translates to: HFPVFLLLTDRRDVRVVYSGVAI*VGSCVI
Trigger: AATCACGCAGCTGCCAACCAAAATAGCAACGCCACT...GTAAACAACTCGCACATCTCTCCTGTCTGTTAGTAGTAAGAATACAGGGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAAGACGGTTTATTCCATTaGGGCACAAACTCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: KPHLATGRNINVGFSTIQDGLFH*GTNSFL
Trigger: CAGGAAGGAGTTTGTGCCCAAATGGAATAAACCGTC...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTGCGCTGCTCGACCTTaGCCTTCCATGGTGTATTTG +
Preference number: 5 (lower is better)
Translates to: YIHLFLSFHLTCINSPVICAARP*PSMVYL
Trigger: CAAATACACCATGGAAGGCAAAGGTCGAGCAGCGCA...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTTTGGTGACCCTGAATaGCCCGAATATCCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: YIHLFLSFHLTCINSPVIFGDPE*PEYPPA
Trigger: TGCTGGGGGATATTCGGGCAATTCAGGGTCACCAAA...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp ACACAGCCATACAATGGAACAGCATTCAGCCCAGCAATAAAAAGGAAAGCAATTGCAGAGAGCTCCTCATaGTCAAGTCCAAGTGGACTT +
Preference number: 5 (lower is better)
Translates to: TQPYNGTAFSPAIKRKAIAESSS*SSPSGL
Trigger: AAGTCCACTTGGACTTGACAATGAGGAGCTCTCTGC...AATTGCTTTCCTTTTTATTGCTGGGCTGAATGCTGTTCCATTGTATGGCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGCGCTCCTGGGCAAGTTaGAGTGCTACATCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLRSWAS*SATSWS
Trigger: AGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCG...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTTTTGGTGACCCTGAATaGCCCGAATATCCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: DRRDVRVVYNSINTALAIFGDPE*PEYPPA
Trigger: TGCTGGGGGATATTCGGGCAATTCAGGGTCACCAAA...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp CATTTCCCTGTATTCTTACTACTAACAGACAGGAGAGATGTGCGAGTTGTTTACGAGTATTTTGGTAAATaGCCACGGCTAGCATCTCGG +
Preference number: 5 (lower is better)
Translates to: HFPVFLLLTDRRDVRVVYEYFGK*PRLASR
Trigger: CCGAGATGCTAGCCGTGGCAATTTACCAAAATACTC...GTAAACAACTCGCACATCTCTCCTGTCTGTTAGTAGTAAGAATACAGGGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp CACTGTGCGTGCATCCCTAAATGCTATTGCGATGTTTCCGGGTTAAATTCTAACGGAGTGCCTAAATCTTaGTCAGTGTTTTGGTATCTG +
Preference number: 5 (lower is better)
Translates to: HCACIPKCYCDVSGLNSNGVPKS*SVFWYL
Trigger: CAGATACCAAAACACTGACAAAGATTTAGGCACTCC...GTTAGAATTTAACCCGGAAACATCGCAATAGCATTTAGGGATGCACGCACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp ATTCAAAGAGCTACTCTAAAGCATTTCCAGGTGGAACTTAGTACCTCTGCTCTAAATGAATTGCAGTCCTaGCCCTCAAGAAGCTCACAG +
Preference number: 5 (lower is better)
Translates to: IQRATLKHFQVELSTSALNELQS*PSRSSQ
Trigger: CTGTGAGCTTCTTGAGGGCAAGGACTGCAATTCATT...TAGAGCAGAGGTACTAAGTTCCACCTGGAAATGCTTTAGAGTAGCTCTTTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR CAA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTTGGCCCAAGGTCACATaGCTAACATGTGGCACACTC +
Preference number: 5 (lower is better)
Translates to: DRRDVRVVYNSINTALAIWPKVT*LTCGTL
Trigger: GAGTGTGCCACATGTTAGCAATGTGACCTTGGGCCA...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAAAGGACAGGGACTTTGTaGTCCTGTTACATGATGATC +
Preference number: 5 (lower is better)
Translates to: KPHLATGRNINVGFSTIQRTGTL*SCYMMI
Trigger: GATCATCATGTAACAGGACAACAAAGTCCCTGTCCT...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS GCA 90 bp CTTCCTCTAGAAATCCAACAGGTTTCATCACCAGAAGCTCATTTCTaGTTTCAGAAAGCTCAAGCACGAACACAGTTCAACTTCAGAGAA +
Preference number: 5 (lower is better)
Translates to: LPLEIQQVSSPEAHF*FQKAQARTQFNFRE
Trigger: TTCTCTGAAGTTGAACTGTGTTCGTGCTTGAGCTTTCTGAAAGCAGAAATGAGCTTCTGGTGATGAAACCTGTTGGATTTCTAGAGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR CAA 90 bp GAGTCAGACCAGAACAAAGGGCACAAACGCACTAAGACCAATCTCTTAGTATGTTTGAGAATCCAAGTGTaGCTTAAGCTTGGACAGAAA +
Preference number: 5 (lower is better)
Translates to: ESDQNKGHKRTKTNLLVCLRIQV*LKLGQK
Trigger: TTTCTGTCCAAGCTTAAGCAACACTTGGATTCTCAA...ACATACTAAGAGATTGGTCTTAGTGCGTTTGTGCCCTTTGTTCTGGTCTGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTCTGGAAGGTCTAACTTaGCCCGCTTTAGTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: YIHLFLSFHLTCINSPVILEGLT*PALVLS
Trigger: TGACAGAACTAAAGCGGGCAAAGTTAGACCTTCCAG...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTGCCCCAAGGGCTTCTTaGGATATTCATCCTCTTTAC +
Preference number: 5 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLAPRAS*DIHPLY
Trigger: GTAAAGAGGATGAATATCCAAAGAAGCCCTTGGGGC...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp AAGCCCCACCTTGCAACAGGAAGAAACATCAATGTCGGGTTTTCTACTATTCAAATATTTGAAGTGGCGTaGCTATTTTGGTTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: KPHLATGRNINVGFSTIQIFEVA*LFWLAA
Trigger: AGCTGCCAACCAAAATAGCAACGCCACTTCAAATAT...TTGAATAGTAGAAAACCCGACATTGATGTTTCTTCCTGTTGCAAGGTGGGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTGACGGTTTATTCCATTaGGGCACAAACTCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLDGLFH*GTNSFL
Trigger: CAGGAAGGAGTTTGTGCCCAAATGGAATAAACCGTC...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTCCTTCCATGGTGTATTaGGCAGTTCTCTCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLPSMVY*AVLSVA
Trigger: AGCTACAGAGAGAACTGCCAAATACACCATGGAAGG...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTGAGTATTTTGGTAAATaGCCACGGCTAGCATCTCGG +
Preference number: 5 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLEYFGK*PRLASR
Trigger: CCGAGATGCTAGCCGTGGCAATTTACCAAAATACTC...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTACGCATCCAGTTGTCTaGCCAGTTTCCCTTGGTAAT +
Preference number: 5 (lower is better)
Translates to: YIHLFLSFHLTCINSPVITHPVV*PVSLGN
Trigger: ATTACCAAGGGAAACTGGCAAGACAACTGGATGCGT...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTATCTCATCCAAACCTTaGAGCTGCATCACTTCCCAC +
Preference number: 5 (lower is better)
Translates to: YIHLFLSFHLTCINSPVIISSKP*SCITSH
Trigger: GTGGGAAGTGATGCAGCTCAAAGGTTTGGATGAGAT...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp CGACTACATTCCATAAAGAGGACAGAAATGGATTGTATAAATGGCCACCCTGGGAGCATTTTCAGCCATTaGGTAGTTCTTTCAATTTCC +
Preference number: 5 (lower is better)
Translates to: RLHSIKRTEMDCINGHPGSIFSH*VVLSIS
Trigger: GGAAATTGAAAGAACTACCAAATGGCTGAAAATGCT...CCCAGGGTGGCCATTTATACAATCCATTTCTGTCCTCTTTATGGAATGTAGTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTGCCCCAAGGGCTTCTTaGGATATTCATCCTCTTTAC +
Preference number: 5 (lower is better)
Translates to: DRRDVRVVYNSINTALAIAPRAS*DIHPLY
Trigger: GTAAAGAGGATGAATATCCAAAGAAGCCCTTGGGGC...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TATATACATTTATTTCTCAGCTTCCACCTGACCTGCATCAACAGCCCAGTTATTTCATCTTTAAGCTTTTaGCTCTCCTCCTCCACCGAT +
Preference number: 5 (lower is better)
Translates to: YIHLFLSFHLTCINSPVISSLSF*LSSSTD
Trigger: ATCGGTGGAGGAGGAGAGCAAAAAGCTTAAAGATGA...AATAACTGGGCTGTTGATGCAGGTCAGGTGGAAGCTGAGAAATAAATGTATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTGAGGACAGAAATGGATaGTATAAATGGCCACCCTGG +
Preference number: 5 (lower is better)
Translates to: DRRDVRVVYNSINTALAIEDRNG*YKWPPW
Trigger: CCAGGGTGGCCATTTATACAATCCATTTCTGTCCTC...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TGCCTTAGTTTTCTCGTCTGTAAACTGGCAATTATAGTAGTACATACTTCGTTATGTCTGTTCTTGTGCTaGCATCCTAAGGGAACCCGA +
Preference number: 5 (lower is better)
Translates to: CLSFLVCKLAIIVVHTSLCLFLC*HPKGTR
Trigger: TCGGGTTCCCTTAGGATGCAAGCACAAGAACAGACA...TAACGAAGTATGTACTACTATAATTGCCAGTTTACAGACGAGAAAACTAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp CCAGAATTTTGTTTGCGTTTCAATGTAGTGTTTAGCTTTAATACACTGCACTTGGCAGTTCAGGAGCATTaGCAGAGATGGCTGGTAATG +
Preference number: 5 (lower is better)
Translates to: PEFCLRFNVVFSFNTLHLAVQEH*QRWLVM
Trigger: CATTACCAGCCATCTCTGCAAATGCTCCTGAACTGC...CAAGTGCAGTGTATTAAAGCTAAACACTACATTGAAACGCAAACAAAATTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp TTGAGAGTCCCACTGAGTATGGCGAAATTTGTAAATTTCGGCATCTTCTTCCGAAAACAGCTTAGGACTTaGTCTAGGAACATGGAAATC +
Preference number: 5 (lower is better)
Translates to: LRVPLSMAKFVNFGIFFRKQLRT*SRNMEI
Trigger: GATTTCCATGTTCCTAGACAAAGTCCTAAGCTGTTT...TCGGAAGAAGATGCCGAAATTTACAAATTTCGCCATACTCAGTGGGACTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS TCA 90 bp TATGATCTGGGAGCTCCTCCTCATGTAAAAAGCCAAATCTATCTGTaGCTTTGTAAACAAGGTAATCAGCATCTTCCCAAGGTTCAATCT +
Preference number: 5 (lower is better)
Translates to: YDLGAPPHVKSQIYL*LCKQGNQHLPKVQS
Trigger: AGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGATTTGGCTTTTTACATGAGGAGGAGCTCCCAGATCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CCA 90 bp AATAAGGATTGTTGCTTAACACCATATCTGTCTCTAAACATAATGTaGTCCCGAAATGTGCGGTTGACATCCAGGTCTATTTGTCTGATG +
Preference number: 5 (lower is better)
Translates to: NKDCCLTPYLSLNIM*SRNVRLTSRSICLM
Trigger: CATCAGACAAATAGACCTGGATGTCAACCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACAATCCTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TGCCTTAGTTTTCTCGTCTGTAAACTGGCAATTATAGTAGTACATACTTCGTTAGAGGACAGAAATGGATaGTATAAATGGCCACCCTGG +
Preference number: 5 (lower is better)
Translates to: CLSFLVCKLAIIVVHTSLEDRNG*YKWPPW
Trigger: CCAGGGTGGCCATTTATACAATCCATTTCTGTCCTC...TAACGAAGTATGTACTACTATAATTGCCAGTTTACAGACGAGAAAACTAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp ATTCAAAGAGCTACTCTAAAGCATTTCCAGGTGGAACTTAGTACCTCTGCTCTAGCAAGACTTGAATCATaGCTAGTTAACAAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: IQRATLKHFQVELSTSALARLES*LVNKPK
Trigger: CTTTGGCTTGTTAACTAGCAATGATTCAAGTCTTGC...TAGAGCAGAGGTACTAAGTTCCACCTGGAAATGCTTTAGAGTAGCTCTTTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR CAA 90 bp GGTGCAAATGTAAAATGGTGCAGCTTCTTTGGAAAACAGTCTGGCAATTTCCTACCTATTCTCACGACTTaGGGTCATCTTAAAAGTTTG +
Preference number: 5 (lower is better)
Translates to: GANVKWCSFFGKQSGNFLPILTT*GHLKSL
Trigger: CAAACTTTTAAGATGACCCAAAGTCGTGAGAATAGG...TAGGAAATTGCCAGACTGTTTTCCAAAGAAGCTGCACCATTTTACATTTGCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS TCA 90 bp GTGAATCTAGCAGATGTTCAGGTAACAGTCATTAAAAGCGCTCCATaGCTAAGTAGCATAATGACCTTTATTAATCACTGCATCTGGTGT +
Preference number: 5 (lower is better)
Translates to: VNLADVQVTVIKSAP*LSSIMTFINHCIWC
Trigger: ACACCAGATGCAGTGATTAATAAAGGTCATTATGCTACTTAGTCATGGAGCGCTTTTAATGACTGTTACCTGAACATCTGCTAGATTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443016.1
CDS-3UTR CAA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTTTGAGAATCCAAGTGTaGCTTAAGCTTGGACAGAAA +
Preference number: 5 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLLRIQV*LKLGQK
Trigger: TTTCTGTCCAAGCTTAAGCAACACTTGGATTCTCAA...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS-3UTR CAA 90 bp TTTGGCAATTATGAACATAGCAATGTAGGTTTCACGTGGTTTCTCTCTCGTCTTGCAAGACTTGAATCATaGCTAGTTAACAAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: FGNYEHSNVGFTWFLSRLARLES*LVNKPK
Trigger: CTTTGGCTTGTTAACTAGCAATGATTCAAGTCTTGC...AAGACGAGAGAGAAACCACGTGAAACCTACATTGCTATGTTCATAATTGCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379237.6
CDS-3UTR CAA 90 bp ATTCAAAGAGCTACTCTAAAGCATTTCCAGGTGGAACTTAGTACCTCTGCTCTAAAAATGATTAATGAATaGCAGTCCTTGCCCTCAAGA +
Preference number: 5 (lower is better)
Translates to: IQRATLKHFQVELSTSALKMINE*QSLPSR
Trigger: TCTTGAGGGCAAGGACTGCAATTCATTAATCATTTT...TAGAGCAGAGGTACTAAGTTCCACCTGGAAATGCTTTAGAGTAGCTCTTTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR CAA 90 bp CACTTGAGTATACCCAAGAAGACCACAGAAAGAAGCAACATAGAGCAAATCAAATACTCAAGCAGCCTTTaGTTAAGGGGTAACAAGTTA +
Preference number: 5 (lower is better)
Translates to: HLSIPKKTTERSNIEQIKYSSSL*LRGNKL
Trigger: TAACTTGTTACCCCTTAACAAAAGGCTGCTTGAGTA...TTTGATTTGCTCTATGTTGCTTCTTTCTGTGGTCTTCTTGGGTATACTCAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR CAA 90 bp GACAGGAGAGATGTGCGAGTTGTTTACAATAGTATAAATACTGCTTTGGCAATTAAACCAAGGGATGCTTaGTGGAAGTACTTGAGAATG +
Preference number: 5 (lower is better)
Translates to: DRRDVRVVYNSINTALAIKPRDA*WKYLRM
Trigger: CATTCTCAAGTACTTCCACAAAGCATCCCTTGGTTT...AATTGCCAAAGCAGTATTTATACTATTGTAAACAACTCGCACATCTCTCCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS-3UTR CAA 90 bp CAAGTAGAGAAGTTGTATGATCTTACTACACCACAGATAGTCATCATTCTACAGTTGCACAACATATATTaGGGACAGTACATGCAATCC +
Preference number: 5 (lower is better)
Translates to: QVEKLYDLTTPQIVIILQLHNIY*GQYMQS
Trigger: GGATTGCATGTACTGTCCCAAATATATGTTGTGCAA...CTGTAGAATGATGACTATCTGTGGTGTAGTAAGATCATACAACTTCTCTACTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR CAA 90 bp CAAGTAGAGAAGTTGTATGATCTTACTACACCACAGATAGTCATCATTCTACAGGTACCTTCAATTACATaGCAGGACCACATATACATT +
Preference number: 5 (lower is better)
Translates to: QVEKLYDLTTPQIVIILQVPSIT*QDHIYI
Trigger: AATGTATATGTGGTCCTGCAATGTAATTGAAGGTAC...CTGTAGAATGATGACTATCTGTGGTGTAGTAAGATCATACAACTTCTCTACTTG
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS-3UTR CAA 90 bp TGCCTTAGTTTTCTCGTCTGTAAACTGGCAATTATAGTAGTACATACTTCGTTAACTTGTGTAGATTTCTaGAGAATCCAAGTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: CLSFLVCKLAIIVVHTSLTCVDF*RIQVLL
Trigger: AAGCAACACTTGGATTCTCAAGAAATCTACACAAGT...TAACGAAGTATGTACTACTATAATTGCCAGTTTACAGACGAGAAAACTAAGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS GCA 72 bp CGCGGCGCGGCGCGGCGGCGGCGGCGGCTACCGCAGTaGCCTCCGCCCCATTGTTTCCCTTCCAAGAGGATC +
Preference number: 6 (lower is better)
Translates to: RGAARRRRRLPQ*PPPHCFPSKRI
Trigger: GATCCTCTTGGAAGGGAAACAATGGGGCGGAGGGCACTGCGGTAGCCGCCGCCGCCGCCGCGCCGCGCCGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606752.1
ENST00000609104.5
CDS CAA 90 bp CGCGGCGCGGCGGCGGCGGCGGCTACCGCAGTGCCCTCCGCCCCATaGTTTCCCTTCCAAGAGGATCCCGGCGAAGCCGAGCCCGGGAAC +
Preference number: 6 (lower is better)
Translates to: RGAAAAAATAVPSAP*FPFQEDPGEAEPGN
Trigger: GTTCCCGGGCTCGGCTTCGCCGGGATCCTCTTGGAAGGGAAACAATGGGGCGGAGGGCACTGCGGTAGCCGCCGCCGCCGCCGCGCCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606752.1
ENST00000609104.5
CDS GCA 72 bp CCCGGGAACCAGGAAGTTCCCCGGCGCGACACCTCCTaGCGCCGCTATGGAAACGGCCCCCGCCTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: PGNQEVPRRDTS*RRYGNGPRLPG
Trigger: CCCTGGGAGGCGGGGGCCGTTTCCATAGCGGCGGCAGGAGGTGTCGCGCCGGGGAACTTCCTGGTTCCCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS GCA 72 bp GTCTTGGCGGCTGTGCTCTCTCGGGCGTCCCGGTCCTaGTCTGGGGGTGCGGGGAGTGCTCGTGCCTCCTGT +
Preference number: 6 (lower is better)
Translates to: VLAAVLSRASRS*SGGAGSARASC
Trigger: ACAGGAGGCACGAGCACTCCCCGCACCCCCAGAGCAGGACCGGGACGCCCGAGAGAGCACAGCCGCCAAGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CAA 90 bp GCCTCCTCCACGGAAGCGCCGCTGTCCAGCTCCGGGCCTGGCACGTaGTCGTACTGCGATGCAGTGGAGCCCCGCTTCCCGTCCTCAGCA +
Preference number: 6 (lower is better)
Translates to: ASSTEAPLSSSGPGT*SYCDAVEPRFPSSA
Trigger: TGCTGAGGACGGGAAGCGGGGCTCCACTGCATCGCAGTACGACAACGTGCCAGGCCCGGAGCTGGACAGCGGCGCTTCCGTGGAGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CCA 72 bp CTCCTCCACGGAAGCGCCGCTGTCCAGCTCCGGGCCTaGCACGTTGTCGTACTGCGATGCAGTGGAGCCCCG +
Preference number: 6 (lower is better)
Translates to: LLHGSAAVQLRA*HVVVLRCSGAP
Trigger: CGGGGCTCCACTGCATCGCAGTACGACAACGTGCCAGGCCCGGAGCTGGACAGCGGCGCTTCCGTGGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS GCA 72 bp GCTCTCCTCCTCCACCGATTTCCGTCTTGGCGGCTGTaGTCTCTCGGGCGTCCCGGTCCTGCTCTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: ALLLHRFPSWRL*SLGRPGPALGV
Trigger: CACCCCCAGAGCAGGACCGGGACGCCCGAGAGAGCACAGCCGCCAAGACGGAAATCGGTGGAGGAGGAGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS GCA 72 bp CCGCTGTCCAGCTCCGGGCCTGGCACGTTGTCGTACTaGGATGCAGTGGAGCCCCGCTTCCCGTCCTCAGCA +
Preference number: 6 (lower is better)
Translates to: PLSSSGPGTLSY*DAVEPRFPSSA
Trigger: TGCTGAGGACGGGAAGCGGGGCTCCACTGCATCGCAGTACGACAACGTGCCAGGCCCGGAGCTGGACAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CCA 72 bp GCTCCGGGCCTGGCACGTTGTCGTACTGCGATGCAGTaGAGCCCCGCTTCCCGTCCTCAGCATCCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: APGLARCRTAMQ*SPASRPQHPGP
Trigger: AGGCCCTGGATGCTGAGGACGGGAAGCGGGGCTCCACTGCATCGCAGTACGACAACGTGCCAGGCCCGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CCA 72 bp ATACATGTCCTCAGTACGGTCCCGACTGCTAGGCTGTaGGCAGCGGACAGAGCTGGCGGTCCCGGGCGGCCG +
Preference number: 6 (lower is better)
Translates to: IHVLSTVPTARL*AADRAGGPGRP
Trigger: CGGCCGCCCGGGACCGCCAGCTCTGTCCGCTGCCCACAGCCTAGCAGTCGGGACCGTACTGAGGACATGTAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000606752.1
ENST00000609104.5
CDS CAA 90 bp CAGTGGAGCCCCGCTTCCCGTCCTCAGCATCCAGGGCCTTCATCTTaGGCCGCACGTTTGACACCCGCACCTCGGCAGGACCTGGGACGG +
Preference number: 6 (lower is better)
Translates to: QWSPASRPQHPGPSS*AARLTPAPRQDLGR
Trigger: CCGTCCCAGGTCCTGCCGAGGTGCGGGTGTCAAACGTGCGGCCAAAGATGAAGGCCCTGGATGCTGAGGACGGGAAGCGGGGCTCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS GCA 72 bp CCAGCGGGCTCGGCCGGCCCACGCTCCTCTGTCCGTTaGTCAAGTGATGGACGCCCCAAGACTGAAGTTCAG +
Preference number: 6 (lower is better)
Translates to: PAGSAGPRSSVR*SSDGRPKTEVQ
Trigger: CTGAACTTCAGTCTTGGGGCGTCCATCACTTGAGCAACGGACAGAGGAGCGTGGGCCGGCCGAGCCCGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CAA 72 bp CCCGCTTCCCGTCCTCAGCATCCAGGGCCTTCATCTTaGGCCGCACGTTTGACACCCGCACCTCGGCAGGAC +
Preference number: 6 (lower is better)
Translates to: PASRPQHPGPSS*AARLTPAPRQD
Trigger: GTCCTGCCGAGGTGCGGGTGTCAAACGTGCGGCCAAAGATGAAGGCCCTGGATGCTGAGGACGGGAAGCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS TCA 72 bp CTCAGCATCCAGGGCCTTCATCTTTGGCCGCACGTTTaGCACCCGCACCTCGGCAGGACCTGGGACGGTAAC +
Preference number: 6 (lower is better)
Translates to: LSIQGLHLWPHV*HPHLGRTWDGN
Trigger: GTTACCGTCCCAGGTCCTGCCGAGGTGCGGGTGTCAAACGTGCGGCCAAAGATGAAGGCCCTGGATGCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS GCA 72 bp TCGGCAGGACCTGGGACGGTAACTGCGAGCGCGGGGTaGGCTGCTCGACCTTTGCCTTCCATGGTGTATTTG +
Preference number: 6 (lower is better)
Translates to: SAGPGTVTASAG*AARPLPSMVYL
Trigger: CAAATACACCATGGAAGGCAAAGGTCGAGCAGCGCACCCCGCGCTCGCAGTTACCGTCCCAGGTCCTGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS GCA 72 bp AGGACCTGGGACGGTAACTGCGAGCGCGGGGTGCGCTaGTCGACCTTTGCCTTCCATGGTGTATTTGGCAGT +
Preference number: 6 (lower is better)
Translates to: RTWDGNCERGVR*STFAFHGVFGS
Trigger: ACTGCCAAATACACCATGGAAGGCAAAGGTCGAGCAGCGCACCCCGCGCTCGCAGTTACCGTCCCAGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CCA 72 bp AAGCTTTTTGCTCTCCTCCTCCACCGATTTCCGTCTTaGCGGCTGTGCTCTCTCGGGCGTCCCGGTCCTGCT +
Preference number: 6 (lower is better)
Translates to: KLFALLLHRFPS*RLCSLGRPGPA
Trigger: AGCAGGACCGGGACGCCCGAGAGAGCACAGCCGCCAAGACGGAAATCGGTGGAGGAGGAGAGCAAAAAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CAA 90 bp GGACCTGGGACGGTAACTGCGAGCGCGGGGTGCGCTGCTCGACCTTaGCCTTCCATGGTGTATTTGGCAGTTCTCTCTGTAGCTGAGACG +
Preference number: 6 (lower is better)
Translates to: GPGTVTASAGCAARP*PSMVYLAVLSVAET
Trigger: CGTCTCAGCTACAGAGAGAACTGCCAAATACACCATGGAAGGCAAAGGTCGAGCAGCGCACCCCGCGCTCGCAGTTACCGTCCCAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS TCA 72 bp CCGATTCCTGTAGTGGTAGGCTGGAGGCGGGGGCCCTaGATATGGATATCCAGATGGACTGGCATCTTCTGC +
Preference number: 6 (lower is better)
Translates to: PIPVVVGWRRGP*IWISRWTGIFC
Trigger: GCAGAAGATGCCAGTCCATCTGGATATCCATATTCAGGGCCCCCGCCTCCAGCCTACCACTACAGGAATCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CAA 72 bp ACGGTAACTGCGAGCGCGGGGTGCGCTGCTCGACCTTaGCCTTCCATGGTGTATTTGGCAGTTCTCTCTGTA +
Preference number: 6 (lower is better)
Translates to: TVTASAGCAARP*PSMVYLAVLSV
Trigger: TACAGAGAGAACTGCCAAATACACCATGGAAGGCAAAGGTCGAGCAGCGCACCCCGCGCTCGCAGTTACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CAA 90 bp GCGAGCGCGGGGTGCGCTGCTCGACCTTTGCCTTCCATGGTGTATTaGGCAGTTCTCTCTGTAGCTGAGACGTCTGACGGTTTATTCCAT +
Preference number: 6 (lower is better)
Translates to: ASAGCAARPLPSMVY*AVLSVAETSDGLFH
Trigger: ATGGAATAAACCGTCAGACGTCTCAGCTACAGAGAGAACTGCCAAATACACCATGGAAGGCAAAGGTCGAGCAGCGCACCCCGCGCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CAA 72 bp GGGTGCGCTGCTCGACCTTTGCCTTCCATGGTGTATTaGGCAGTTCTCTCTGTAGCTGAGACGTCTGACGGT +
Preference number: 6 (lower is better)
Translates to: GCAARPLPSMVY*AVLSVAETSDG
Trigger: ACCGTCAGACGTCTCAGCTACAGAGAGAACTGCCAAATACACCATGGAAGGCAAAGGTCGAGCAGCGCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CCA 72 bp GACTTCTATTCGACTAGACGGCAGTACAAGGGGGCTTaGGCGGCTGTAAGATTTCTCCGGAGAAGCACTGAC +
Preference number: 6 (lower is better)
Translates to: DFYSTRRQYKGA*AAVRFLRRSTD
Trigger: GTCAGTGCTTCTCCGGAGAAATCTTACAGCCGCCCAAGCCCCCTTGTACTGCCGTCTAGTCGAATAGAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CCA 72 bp GAGGCGGGGGCCCTGAATATGGATATCCAGATGGACTaGCATCTTCTGCGGCCGGTGAAGCTTTATATCTCA +
Preference number: 6 (lower is better)
Translates to: EAGALNMDIQMD*HLLRPVKLYIS
Trigger: TGAGATATAAAGCTTCACCGGCCGCAGAAGATGCCAGTCCATCTGGATATCCATATTCAGGGCCCCCGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CAA 90 bp ACTGACGGAAAGAGTAGAACCATGAGGTCTCCTGGAAGGATTCAGTaGAGTCCCAGGGCTAAACTGTGGAGAAGCAAAGCTGCTGTTGGC +
Preference number: 6 (lower is better)
Translates to: TDGKSRTMRSPGRIQ*SPRAKLWRSKAAVG
Trigger: GCCAACAGCAGCTTTGCTTCTCCACAGTTTAGCCCTGGGACTCAACTGAATCCTTCCAGGAGACCTCATGGTTCTACTCTTTCCGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CCA 72 bp TACACGTCAAATCTCACAGCAACACTGACTCTTGGATaGAAAGCCCGTCCCGATTCCTGTAGTGGTAGGCTG +
Preference number: 6 (lower is better)
Translates to: YTSNLTATLTLG*KARPDSCSGRL
Trigger: CAGCCTACCACTACAGGAATCGGGACGGGCTTTCCATCCAAGAGTCAGTGTTGCTGTGAGATTTGACGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CAA 72 bp AAGCCATGCATGGCATGTTTAGGGCCTGAGAAGAGTTaGACCAGGGCCCAGAAGGCATCTTCCTCGTTCATA +
Preference number: 6 (lower is better)
Translates to: KPCMACLGPEKS*TRAQKASSSFI
Trigger: TATGAACGAGGAAGATGCCTTCTGGGCCCTGGTCAAACTCTTCTCAGGCCCTAAACATGCCATGCATGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CAA 72 bp GGCGTTGCTATTTTGGTTGGCAGCTGCGTGATTATATaGCCTGGAACTGTCCTGTGGACCCGATGGGAGTTT +
Preference number: 6 (lower is better)
Translates to: GVAILVGSCVII*PGTVLWTRWEF
Trigger: AAACTCCCATCGGGTCCACAGGACAGTTCCAGGCAATATAATCACGCAGCTGCCAACCAAAATAGCAACGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CCA 72 bp GGCAGCTGCGTGATTATATTGCCTGGAACTGTCCTGTaGACCCGATGGGAGTTTTCTTTGAAAATCTGCCTC +
Preference number: 6 (lower is better)
Translates to: GSCVIILPGTVL*TRWEFSLKICL
Trigger: GAGGCAGATTTTCAAAGAAAACTCCCATCGGGTCCACAGGACAGTTCCAGGCAATATAATCACGCAGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CCA 72 bp ATTCATTGCAAGGGGTTAGGGAAGTGCAGGGAGGTGTaGGAAGGGTATGATAGAAAGGGCATAGCGTTAAGG +
Preference number: 6 (lower is better)
Translates to: IHCKGLGKCREV*EGYDRKGIALR
Trigger: CCTTAACGCTATGCCCTTTCTATCATACCCTTCCCACACCTCCCTGCACTTCCCTAACCCCTTGCAATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443016.1
CDS CAA 90 bp GACAGGGCAAGACTCCGTCTTCCTTCACTGTGGCTGCTTTTTGCCTaGATGGTGTCACCAGCTCCTTTACAATCTGCAAGACTTGAATCA +
Preference number: 6 (lower is better)
Translates to: DRARLRLPSLWLLFA*MVSPAPLQSARLES
Trigger: TGATTCAAGTCTTGCAGATTGTAAAGGAGCTGGTGACACCATCAAGGCAAAAAGCAGCCACAGTGAAGGAAGACGGAGTCTTGCCCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS TCA 72 bp TTTGAAGTGGCGTTGCTATTTTGGTTGGCAGCTGCGTaGTTATATTGCCTGGAACTGTCCTGTGGACCCGAT +
Preference number: 6 (lower is better)
Translates to: FEVALLFWLAAA*LYCLELSCGPD
Trigger: ATCGGGTCCACAGGACAGTTCCAGGCAATATAATCACGCAGCTGCCAACCAAAATAGCAACGCCACTTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS TCA 72 bp CGGGCTTCCCCATCTAGCTGGGACGGATATCGTGCATaGCTTGGAGGCTGTACTTTAAAAGTAAACTTGTTG +
Preference number: 6 (lower is better)
Translates to: RASPSSWDGYRA*LGGCTLKVNLL
Trigger: CAACAAGTTTACTTTTAAAGTACAGCCTCCAAGTCATGCACGATATCCGTCCCAGCTAGATGGGGAAGCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS TCA 72 bp TGGATATCCAGATGGACTGGCATCTTCTGCGGCCGGTaGAGCTTTATATCTCACGGGACTATCTACAGAAAC +
Preference number: 6 (lower is better)
Translates to: WISRWTGIFCGR*SFISHGTIYRN
Trigger: GTTTCTGTAGATAGTCCCGTGAGATATAAAGCTTCACCGGCCGCAGAAGATGCCAGTCCATCTGGATATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CAA 90 bp CCTCTGTCATATTTAGCAACTATTTCAGCTCGCTCCTGGGCAAGTTaGAGTGCTACATCCTGGTCTGAATCTTCCTTCACTGTGGCTGCT +
Preference number: 6 (lower is better)
Translates to: PLSYLATISARSWAS*SATSWSESSFTVAA
Trigger: AGCAGCCACAGTGAAGGAAGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAGTTGCTAAATATGACAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379237.6
CDS TCA 72 bp TCTTTAGCAAGTACACGTCAAATCTCACAGCAACACTaGCTCTTGGATGGAAAGCCCGTCCCGATTCCTGTA +
Preference number: 6 (lower is better)
Translates to: SLASTRQISQQH*LLDGKPVPIPV
Trigger: TACAGGAATCGGGACGGGCTTTCCATCCAAGAGTCAGTGTTGCTGTGAGATTTGACGTGTACTTGCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CCA 72 bp CCTCTGTCATATTTAGCAACTATTTCAGCTCGCTCCTaGGCAAGTTTGAGTGCTACATCCTGGTCTGAATCC +
Preference number: 6 (lower is better)
Translates to: PLSYLATISARS*ASLSATSWSES
Trigger: GGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAGTTGCTAAATATGACAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277575.5
CDS CCA 72 bp TGCTATTTTGGTTGGCAGCTGCGTGATTATATTGCCTaGAACTGTCCTGTGGACCCGATGGGAGTTTTCTTT +
Preference number: 6 (lower is better)
Translates to: CYFGWQLRDYIA*NCPVDPMGVFF
Trigger: AAAGAAAACTCCCATCGGGTCCACAGGACAGTTCCAGGCAATATAATCACGCAGCTGCCAACCAAAATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CAA 72 bp CTCTCTGTAGCTGAGACGTCTGACGGTTTATTCCATTaGGGCACAAACTCCTTCCTGATATTTGAAGTGGCG +
Preference number: 6 (lower is better)
Translates to: LSVAETSDGLFH*GTNSFLIFEVA
Trigger: CGCCACTTCAAATATCAGGAAGGAGTTTGTGCCCAAATGGAATAAACCGTCAGACGTCTCAGCTACAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CAA 90 bp CTACATCCTGGTCTGAATCTTCCTTCACTGTGGCTGCTTTTTGCCTaGATGGTGTCACCAGCTCCTTTACAATCTGCAAGACTTGAATCA +
Preference number: 6 (lower is better)
Translates to: LHPGLNLPSLWLLFA*MVSPAPLQSARLES
Trigger: TGATTCAAGTCTTGCAGATTGTAAAGGAGCTGGTGACACCATCAAGGCAAAAAGCAGCCACAGTGAAGGAAGATTCAGACCAGGATGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379237.6
CDS CCA 72 bp AAGAAGGAGGGCCCAGACTTCACCTCTGAGCTGGAGTaGTATTCCTTTGTAAATTCGCCTATGAAACTTTTC +
Preference number: 6 (lower is better)
Translates to: KKEGPDFTSELE*YSFVNSPMKLF
Trigger: GAAAAGTTTCATAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTGAAGTCTGGGCCCTCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CCA 72 bp CCTCTGTCATATTTAGCAACTATTTCAGCTCGCTCCTaGGCAAGTTTGAGTGCTACATCCTGGTCTGAATCT +
Preference number: 6 (lower is better)
Translates to: PLSYLATISARS*ASLSATSWSES
Trigger: AGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAGTTGCTAAATATGACAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379237.6
CDS CCA 72 bp CCTCTGTCATATTTAGCAACTATTTCAGCTCGCTCCTaGGCAAGTTTGAGTGCTACATCCTGGTCTGAATTC +
Preference number: 6 (lower is better)
Translates to: PLSYLATISARS*ASLSATSWSEF
Trigger: GAATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAGTTGCTAAATATGACAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS CAA 90 bp TTGGCAGTTCTCTCTGTAGCTGAGACGTCTGACGGTTTATTCCATTaGGGCACAAACTCCTTCCTGATATTTGAAGTGGCGTTGCTATTT +
Preference number: 6 (lower is better)
Translates to: LAVLSVAETSDGLFH*GTNSFLIFEVALLF
Trigger: AAATAGCAACGCCACTTCAAATATCAGGAAGGAGTTTGTGCCCAAATGGAATAAACCGTCAGACGTCTCAGCTACAGAGAGAACTGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS TCA 72 bp TTTATTCCATTTGGGCACAAACTCCTTCCTGATATTTaGAGTGGCGTTGCTATTTTGGTTGGCAGCTGCGTG +
Preference number: 6 (lower is better)
Translates to: FIPFGHKLLPDI*SGVAILVGSCV
Trigger: CACGCAGCTGCCAACCAAAATAGCAACGCCACTTCAAATATCAGGAAGGAGTTTGTGCCCAAATGGAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS TCA 72 bp CTGACGGTTTATTCCATTTGGGCACAAACTCCTTCCTaGTATTTGAAGTGGCGTTGCTATTTTGGTTGGCAG +
Preference number: 6 (lower is better)
Translates to: LTVYSIWAQTPS*YLKWRCYFGWQ
Trigger: CTGCCAACCAAAATAGCAACGCCACTTCAAATATCAGGAAGGAGTTTGTGCCCAAATGGAATAAACCGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CAA 72 bp TATTTAGCAACTATTTCAGCTCGCTCCTGGGCAAGTTaGAGTGCTACATCCTGGTCTGAATCCTTTGTGAGA +
Preference number: 6 (lower is better)
Translates to: YLATISARSWAS*SATSWSESFVR
Trigger: TCTCACAAAGGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAGTTGCTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277575.5
CDS CAA 72 bp TCACCAGCTCCTTTACAATCTGCAAGACTTGAATCATaGCTAGTTAACAAGCCAAAGACTCCAGCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: SPAPLQSARLES*LVNKPKTPAAS
Trigger: GGAAGCAGCTGGAGTCTTTGGCTTGTTAACTAGCAATGATTCAAGTCTTGCAGATTGTAAAGGAGCTGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379237.6
ENST00000609853.1
CDS CAA 72 bp TATTTAGCAACTATTTCAGCTCGCTCCTGGGCAAGTTaGAGTGCTACATCCTGGTCTGAATCTTCCTTCACT +
Preference number: 6 (lower is better)
Translates to: YLATISARSWAS*SATSWSESSFT
Trigger: AGTGAAGGAAGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAGTTGCTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379237.6
CDS CAA 72 bp TATTTAGCAACTATTTCAGCTCGCTCCTGGGCAAGTTaGAGTGCTACATCCTGGTCTGAATTCATGACTGGA +
Preference number: 6 (lower is better)
Translates to: YLATISARSWAS*SATSWSEFMTG
Trigger: TCCAGTCATGAATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAGTTGCTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609104.5
CDS CAA 90 bp AACCTTGGTTCTGATGACGGTTACACAAATCTACACATGATAAAATaGCCGAGGACCCACCACACACACACACACATACACACAAATGTC +
Preference number: 6 (lower is better)
Translates to: NLGSDDGYTNLHMIK*PRTHHTHTHIHTNV
Trigger: GACATTTGTGTGTATGTGTGTGTGTGTGTGGTGGGTCCTCGGCAATTTTATCATGTGTAGATTTGTGTAACCGTCATCAGAACCAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443016.1
CDS TCA 72 bp AAGCTCAAGCACGAACACAGTTCAACTTCAGAGAAATaGATGCTTTGCCTAGCTATCCATGAAGGCTCTGAA +
Preference number: 6 (lower is better)
Translates to: KLKHEHSSTSEK*MLCLAIHEGSE
Trigger: TTCAGAGCCTTCATGGATAGCTAGGCAAAGCATTCATTTCTCTGAAGTTGAACTGTGTTCGTGCTTGAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609853.1
CDS CCA 72 bp GTGATTATATTGCCTGGAACTGTCCTGTGGACCCGATaGGAGTTTTCTTTGAAAATCTGCCTCATCTTTAAG +
Preference number: 6 (lower is better)
Translates to: VIILPGTVLWTR*EFSLKICLIFK
Trigger: CTTAAAGATGAGGCAGATTTTCAAAGAAAACTCCCATCGGGTCCACAGGACAGTTCCAGGCAATATAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS CAA 90 bp TTGATGGTGTCACCAGCTCCTTTACAATCTGCAAGACTTGAATCATaGCTAGTTAACAAGCCAAAGACTCCAGCTGCTTCCTCTAGAAAT +
Preference number: 6 (lower is better)
Translates to: LMVSPAPLQSARLES*LVNKPKTPAASSRN
Trigger: ATTTCTAGAGGAAGCAGCTGGAGTCTTTGGCTTGTTAACTAGCAATGATTCAAGTCTTGCAGATTGTAAAGGAGCTGGTGACACCATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379237.6
ENST00000609853.1
CDS TCA 72 bp ACAGGGCAAGACTCCGTTCATGACTGGAAATGGGTCTaGATGTTGTCCCAATCAGATATTAAACCAAAATCT +
Preference number: 6 (lower is better)
Translates to: TGQDSVHDWKWV*MLSQSDIKPKS
Trigger: AGATTTTGGTTTAATATCTGATTGGGACAACATTCAGACCCATTTCCAGTCATGAACGGAGTCTTGCCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606752.1
CDS CCA 72 bp TGTTGCTTAACACCATATCTGTCTCTAAACATAATGTaGTCCCGAAATGTGCGGTTGACATCCAGGTCTATT +
Preference number: 6 (lower is better)
Translates to: CCLTPYLSLNIM*SRNVRLTSRSI
Trigger: AATAGACCTGGATGTCAACCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277575.5
ENST00000379237.6
ENST00000609104.5
CDS TCA 72 bp GCAGATGTTCAGGTAACAGTCATTAAAAGCGCTCCATaGCTAAGTAGCATAATGACCTTTATTAATCACTGC +
Preference number: 6 (lower is better)
Translates to: ADVQVTVIKSAP*LSSIMTFINHC
Trigger: GCAGTGATTAATAAAGGTCATTATGCTACTTAGTCATGGAGCGCTTTTAATGACTGTTACCTGAACATCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443016.1
CDS GCA 72 bp CACAGCATGTATATTTTGTTAGATGTTTCTGGTAACTaGCATCGTGAATCTAGCAGATGTTCAGGTAACAGT +
Preference number: 6 (lower is better)
Translates to: HSMYILLDVSGN*HRESSRCSGNS
Trigger: ACTGTTACCTGAACATCTGCTAGATTCACGATGGCAGTTACCAGAAACATCTAACAAAATATACATGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443016.1
CDS GCA 72 bp CCCATAATTAATATACCCATTCTCTGCTTTTCAACTTaGTCCCTGCAGAGTCTAGGTAAAGTTTTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: PIINIPILCFST*SLQSLGKVFPS
Trigger: AGAAGGAAAAACTTTACCTAGACTCTGCAGGGAGCAAGTTGAAAAGCAGAGAATGGGTATATTAATTATGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443016.1
CDS CCA 72 bp CTAAGTAGCATAATGACCTTTATTAATCACTGCATCTaGTGTTTGCCAAATGGGAGAGAAACAATACTCAAG +
Preference number: 6 (lower is better)
Translates to: LSSIMTFINHCI*CLPNGRETILK
Trigger: CTTGAGTATTGTTTCTCTCCCATTTGGCAAACACCAGATGCAGTGATTAATAAAGGTCATTATGCTACTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443016.1
CDS CAA 90 bp TTTAGATTAGTCCAAGCCAGATTTTCAAAGCACAGCATGTATATTTaGTTAGATGTTTCTGGTAACTGCCATCGTGAATCTAGCAGATGT +
Preference number: 6 (lower is better)
Translates to: FRLVQARFSKHSMYI*LDVSGNCHRESSRC
Trigger: ACATCTGCTAGATTCACGATGGCAGTTACCAGAAACATCTAACAAAATATACATGCTGTGCTTTGAAAATCTGGCTTGGACTAATCTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443016.1