RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP54 (Homo sapiens)

Ensembl gene IDs: ENSG00000166348

Ensembl transcript IDs: ENST00000339859.8, ENST00000413442.5, ENST00000418501.5, ENST00000422491.7, ENST00000424265.5, ENST00000433394.1, ENST00000451492.5, ENST00000461520.5, ENST00000464635.1, ENST00000466048.6, ENST00000474929.1, ENST00000480210.1, ENST00000481991.1, ENST00000492357.1, ENST00000497106.5, ENST00000498143.5, ENST00000498213.1, ENST00000680396.1, ENST00000681793.1

Found 1947 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCTGGAGTAGTCAGGAATCTGGTCCCAATATGCTGGTTGGTCTCTaGCCAGGGTGCCCAGGAGTTGTCTGTTCTGGAGCGATGGGGGAG +
Preference number: 1 (lower is better)
Translates to: PWSSQESGPNMLVGL*PGCPGVVCSGAMGE
Trigger: CTCCCCCATCGCTCCAGAACAGACAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCTGACTACTCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR CCA 90 bp TCCTCTGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTaGGAAACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTT +
Preference number: 1 (lower is better)
Translates to: SSGTAQPENGQAPLC*ETLAYRSPHCLCPL
Trigger: AAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CCA 90 bp CCTGCTGCCCCCATCCAGAACAGCCAGCTTGAGAAGCCTGAAGACTaGCCTGATACAGAGACTCCAATTCTGAGGTCTCCTGCTCTGTGT +
Preference number: 1 (lower is better)
Translates to: PAAPIQNSQLEKPED*PDTETPILRSPALC
Trigger: ACACAGAGCAGGAGACCTCAGAATTGGAGTCTCTGTATCAGGCCAGTCTTCAGGCTTCTCAAGCTGGCTGTTCTGGATGGGGGCAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR TCA 90 bp GGGAAGAAACCGGAGCTTCCTCCCTCTCTGAGACAACGGTGCCACTaGGACTGCGTGAGATGCGACGTAAATTCTCTGCACTGTACTGCT +
Preference number: 1 (lower is better)
Translates to: GKKPELPPSLRQRCH*DCVRCDVNSLHCTA
Trigger: AGCAGTACAGTGCAGAGAATTTACGTCGCATCTCACGCAGTCTCAGTGGCACCGTTGTCTCAGAGAGGGAGGAAGCTCCGGTTTCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466048.6
3UTR GCA 90 bp ACCCCTCTCCCACTGTTCTCCTGTGTCCAGAGTGGGAGGCATAACTaGTTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAG +
Preference number: 1 (lower is better)
Translates to: TPLPLFSCVQSGRHN*FASSHHLGAYLLFE
Trigger: CTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAAGCAGTTATGCCTCCCACTCTGGACACAGGAGAACAGTGGGAGAGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR CCA 90 bp AGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTaGAGGGCACAGGGAATGCTGACAGGCCATAATACCTGGGCAGGG +
Preference number: 1 (lower is better)
Translates to: RVNVMLAAPHSRPKV*RAQGMLTGHNTWAG
Trigger: CCCTGCCCAGGTATTATGGCCTGTCAGCATTCCCTGTGCCCTCCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR CCA 90 bp TCCTTGAAACCTGTACTATCCCTCATGGAGACACCCTGCATCCTCTaGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGA +
Preference number: 1 (lower is better)
Translates to: SLKPVLSLMETPCIL*NCSARERTSPFVLG
Trigger: TCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCAGAGGATGCAGGGTGTCTCCATGAGGGATAGTACAGGTTTCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR GCA 90 bp AAACCTGTACTATCCCTCATGGAGACACCCTGCATCCTCTGGAACTaGTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCT +
Preference number: 1 (lower is better)
Translates to: KPVLSLMETPCILWN*SARERTSPFVLGNS
Trigger: AGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCAGAGGATGCAGGGTGTCTCCATGAGGGATAGTACAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CCA 90 bp GTTGTCACACCTAGAGCCTTGCAGCTTACCCTCTGGGGCATCCAATaGCTCCCAACTATGATGAGAATTCTTCTCAGTCCACCCTGGTGC +
Preference number: 1 (lower is better)
Translates to: VVTPRALQLTLWGIQ*LPTMMRILLSPPWC
Trigger: GCACCAGGGTGGACTGAGAAGAATTCTCATCATAGTTGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CCA 90 bp CCATGCTCCATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATaGGCTGAGTGCAACCTCCTCCCCATGCCATCTGCAGAGCCTGTT +
Preference number: 1 (lower is better)
Translates to: PCSISAVEVFERPGS*AECNLLPMPSAEPV
Trigger: AACAGGCTCTGCAGATGGCATGGGGAGGAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAATGGAGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR TCA 90 bp GCTAGATGGTGGGTACACAGGATGAACAATGGGAGGGTGGGAGGGTaGATGGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAG +
Preference number: 1 (lower is better)
Translates to: ARWWVHRMNNGRVGG*MEKITPGLSVRNLK
Trigger: CTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCCATTCACCCTCCCACCCTCCCATTGTTCATCCTGTGTACCCACCATCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR GCA 90 bp TTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACTaGTGGACACTCCTTGAAGTTCCTGAGAAGTACGCACTGTTCTGG +
Preference number: 1 (lower is better)
Translates to: LAPWEVSPLSHIARN*WTLLEVPEKYALFW
Trigger: CCAGAACAGTGCGTACTTCTCAGGAACTTCAAGGAGTGTCCAGCAGTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422491.7
3UTR GCA 90 bp GAAGGGTCATGGATGACAGGGAGGGAAGAGGAGCTGGAACAACGGTaGCCGGTTTCCAAAGGCTTCCTCACGTTTGATGAATCAAAACTG +
Preference number: 1 (lower is better)
Translates to: EGSWMTGREEELEQR*PVSKGFLTFDESKL
Trigger: CAGTTTTGATTCATCAAACGTGAGGAAGCCTTTGGAAACCGGGCACCGTTGTTCCAGCTCCTCTTCCCTCCCTGTCATCCATGACCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
3UTR GCA 90 bp AACATCTCTCACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTaGCAACCTGGGCTGTCCTCCGCTAGAAGTTTCACCATTAGGCAG +
Preference number: 1 (lower is better)
Translates to: NISHLGQLLLVYVWL*QPGLSSARSFTIRQ
Trigger: CTGCCTAATGGTGAAACTTCTAGCGGAGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGTGAGAGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CCA 90 bp TGCTGTGGGGCAGATGACTCTGGAGATAGTGATGAGTGTGACTCATaGCAGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCT +
Preference number: 1 (lower is better)
Translates to: CCGADDSGDSDECDS*QEAGEWKKELAPNS
Trigger: AGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCTGCCATGAGTCACACTCATCACTATCTCCAGAGTCATCTGCCCCACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CCA 90 bp TGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTaGGGGAGCTGTGCTGTGGGGCAGATGACTCTGGAGATAGTGATG +
Preference number: 1 (lower is better)
Translates to: CCLLQPKSEASRQIY*GSCAVGQMTLEIVM
Trigger: CATCACTATCTCCAGAGTCATCTGCCCCACAGCACAGCTCCCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CCA 90 bp GCTGCAACTGCTGTTGTCACACCTAGAGCCTTGCAGCTTACCCTCTaGGGCATCCAATGGCTCCCAACTATGATGAGAATTCTTCTCAGT +
Preference number: 1 (lower is better)
Translates to: AATAVVTPRALQLTL*GIQWLPTMMRILLS
Trigger: ACTGAGAAGAATTCTCATCATAGTTGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGACAACAGCAGTTGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTaGGCTGAGCTGATGAATTTGAAGGACTACAGCCTAGGCTGTGTT +
Preference number: 1 (lower is better)
Translates to: KQQALWGGRFYTGEG*AELMNLKDYSLGCV
Trigger: AACACAGCCTAGGCTGTAGTCCTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CCA 90 bp AAGTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTaGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGC +
Preference number: 1 (lower is better)
Translates to: KSVLLPRSLDLTSLT*DSFSWYMSGSANLG
Trigger: GCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR GCA 90 bp AAACTTCTATCCTTGAAACCTGTACTATCCCTCATGGAGACACCCTaGATCCTCTGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTT +
Preference number: 1 (lower is better)
Translates to: KLLSLKPVLSLMETP*ILWNCSARERTSPF
Trigger: AAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCAGAGGATGCAGGGTGTCTCCATGAGGGATAGTACAGGTTTCAAGGATAGAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR GCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTaGTTCTTTCTGGTAGTGTGGCAGTGTAGGTTAGTTGAGGATTGC +
Preference number: 1 (lower is better)
Translates to: GKDHSRTECEEPEGP*FFLVVWQCRLVEDC
Trigger: GCAATCCTCAACTAACCTACACTGCCACACTACCAGAAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR CCA 90 bp TCTGGAGATAGTGATGAGTGTGACTCATGGCAGGAAGCAGGTGAATaGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGATTCC +
Preference number: 1 (lower is better)
Translates to: SGDSDECDSWQEAGE*KKELAPNSVSMPDS
Trigger: GGAATCCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCTGCCATGAGTCACACTCATCACTATCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CCA 90 bp CTTTTCTTGGAACAGCTGTTCTTGAGCAATGCCTCTTCCTTCTTGTaGAGGGAGCTTGCTGCAACTGCTGTTGTCACACCTAGAGCCTTG +
Preference number: 1 (lower is better)
Translates to: LFLEQLFLSNASSFL*RELAATAVVTPRAL
Trigger: CAAGGCTCTAGGTGTGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGCATTGCTCAAGAACAGCTGTTCCAAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CCA 90 bp AGACCTAACATCTCTCACTTGGGACAGCTTCTCTTGGTATATGTCTaGCTCTGCCAACCTGGGCTGTCCTCCGCTAGAAGTTTCACCATT +
Preference number: 1 (lower is better)
Translates to: RPNISHLGQLLLVYV*LCQPGLSSARSFTI
Trigger: AATGGTGAAACTTCTAGCGGAGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGTGAGAGATGTTAGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR TCA 90 bp AGCTTGAGAAGCCTGAAGACTGGCCTGATACAGAGACTCCAATTCTaGGGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAG +
Preference number: 1 (lower is better)
Translates to: SLRSLKTGLIQRLQF*GLLLCVLVPMWMQK
Trigger: CTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACCTCAGAATTGGAGTCTCTGTATCAGGCCAGTCTTCAGGCTTCTCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR GCA 90 bp ACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGCCTAGGTaGCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCAC +
Preference number: 1 (lower is better)
Translates to: TRMGIMRGGLHSWPR*PMLKLRITEPCDIH
Trigger: GTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CCA 90 bp ATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTaGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGT +
Preference number: 1 (lower is better)
Translates to: IGYTRMGIMRGGLHS*PRCPMLKLRITEPC
Trigger: ACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR TCA 90 bp AAGAAAGGTGTAGCTCCAGGAAAGGAAAGGAATAACCTTTACCATTaGCTGTGCTGCAGGACTCTAGCCCTGATCTGCTCTCTTCTGGGA +
Preference number: 1 (lower is better)
Translates to: KKGVAPGKERNNLYH*LCCRTLALICSLLG
Trigger: TCCCAGAAGAGAGCAGATCAGGGCTAGAGTCCTGCAGCACAGTCAATGGTAAAGGTTATTCCTTTCCTTTCCTGGAGCTACACCTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR CCA 90 bp TGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTCTCTaGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCAT +
Preference number: 1 (lower is better)
Translates to: CVLVPMWMQKDVISL*IGYTRMGIMRGGLH
Trigger: ATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAGAGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATGCACAACCATGGCAGTaGTGCAGGGTACCAACGCTG +
Preference number: 2 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHAQPWQ*CRVPTL
Trigger: CAGCGTTGGTACCCTGCATCACTGCCATGGTTGTGC...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGGGCACAGGGAATGCTaGCAGGCCATAATACCTGGG +
Preference number: 2 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRGHREC*QAIIPG
Trigger: CCCAGGTATTATGGCCTGTCAGCATTCCCTGTGCCC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGGGCTCAGGTGGAGGTaGGGACATAAAGCATCCAGG +
Preference number: 2 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRGLRWR*GHKASR
Trigger: CCTGGATGCTTTATGTCCCCACCTCCACCTGAGCCC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTCTGCAGAGCCTGTTTaGCTAAGTGGGTGCCAGGCG +
Preference number: 2 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRSAEPV*LSGCQA
Trigger: CGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCATGCATCCTCTGGAACTaGTCAGCCAGAGAACGGACA +
Preference number: 2 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPCILWN*SARERT
Trigger: TGTCCGTTCTCTGGCTGAGCAGTTCCAGAGGATGCA...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCATCCAGAGAGGATTGTTaGTTTGCCCATGGCCAGTGG +
Preference number: 2 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPSREDC*FAHGQW
Trigger: CCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGA...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCTCTTCCCAGGAAAGTaGTCTATCCCCACCCTCCAG +
Preference number: 2 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHLFPGK*SIPTLQ
Trigger: CTGGAGGGTGGGGATAGACCACTTTCCTGGGAAGAG...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGGCACAACCATGGCAGTaGTGCAGGGTACCAACGCTG +
Preference number: 2 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLAQPWQ*CRVPTL
Trigger: CAGCGTTGGTACCCTGCATCACTGCCATGGTTGTGC...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCAGCCCCATGCTTAAGCTaGGAATCACAGAACCTTGTG +
Preference number: 2 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPAPCLS*ESQNLV
Trigger: CACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGC...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATGGACAAGCCCCTTTGTaGTGGGAAACTCTGGCCTAT +
Preference number: 2 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHGQAPL*WETLAY
Trigger: ATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCC...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATTCCAGAGAGGATTGTTaGTTTGCCCATGGCCAGTGG +
Preference number: 2 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHSREDC*FAHGQW
Trigger: CCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGA...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCAGCCTTCCGAGTAGTTaGGACTACAGGCACGCACCG +
Preference number: 2 (lower is better)
Translates to: WNCSARERTSPFVLGNSGSLPSS*DYRHAP
Trigger: CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCT...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CAA 90 bp CCTGCATCCTCTGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTaGTGCTGGGAAACTCTGGCCTATAGGTCTCCTCACTGCCTCTGT +
Preference number: 2 (lower is better)
Translates to: PASSGTAQPENGQAP*CWETLAYRSPHCLC
Trigger: ACAGAGGCAGTGAGGAGACCTATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCAGAGGATGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCCAAACTCTGTATCCATaGCGGATTCCAGTTGGGCCT +
Preference number: 2 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRQTLYP*RIPVGP
Trigger: AGGCCCAACTGGAATCCGGCATGGATACAGAGTTTG...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGTTGCAGCTTACCCTCTaGGGCATCCAATGGCTCCCA +
Preference number: 2 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRLQLTL*GIQWLP
Trigger: TGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAA...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGTCTGCAGAGCCTGTTTaGCTAAGTGGGTGCCAGGCG +
Preference number: 2 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKSAEPV*LSGCQA
Trigger: CGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CAA 90 bp GGATTGCACCCTGGAGTAGTCAGGAATCTGGTCCCAATATGCTGGTaGGTCTCTGACCAGGGTGCCCAGGAGTTGTCTGTTCTGGAGCGA +
Preference number: 2 (lower is better)
Translates to: GLHPGVVRNLVPICW*VSDQGAQELSVLER
Trigger: TCGCTCCAGAACAGACAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCTGACTACTCCAGGGTGCAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR TCA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGGCACAACCATGGCAGTaGTGCAGGGTACCAACGCTG +
Preference number: 2 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKAQPWQ*CRVPTL
Trigger: CAGCGTTGGTACCCTGCATCACTGCCATGGTTGTGC...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp GGAGCTTCCTCCCTCTCTGAGACAACGGTGCCACTGAGACTGCGTGAGATGCGAATGTCATCAGAACCATaGCCACAGGGCTACATGTCC +
Preference number: 2 (lower is better)
Translates to: GASSLSETTVPLRLREMRMSSEP*PQGYMS
Trigger: GGACATGTAGCCCTGTGGTCATGGTTCTGATGACAT...TCGCATCTCACGCAGTCTCAGTGGCACCGTTGTCTCAGAGAGGGAGGAAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466048.6
3UTR-3UTR TCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGTGGGTACACAGGATaGACAATGGGAGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFGGYTG*TMGGWE
Trigger: CTCCCACCCTCCCATTGTTCATCCTGTGTACCCACC...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR CCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTAGGGCTCAGGTGGAGGTaGGGACATAAAGCATCCAGG +
Preference number: 2 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVGLRWR*GHKASR
Trigger: CCTGGATGCTTTATGTCCCCACCTCCACCTGAGCCC...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACTCAAGGCAGATCTACTaGGGGAGCTGTGCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNSRQIY*GSCAVG
Trigger: CCCCACAGCACAGCTCCCCCAGTAGATCTGCCTTGA...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCGCCTCTTCCTTCTTGTaGAGGGAGCTTGCTGCAACT +
Preference number: 2 (lower is better)
Translates to: WNCSARERTSPFVLGNSGASSFL*RELAAT
Trigger: AGTTGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGC...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp GGAGCTTCCTCCCTCTCTGAGACAACGGTGCCACTGAGACTGCGTGAGATGCGATGTGCTGGGAAACTCTaGCCTATAGGTCTCCTCACT +
Preference number: 2 (lower is better)
Translates to: GASSLSETTVPLRLREMRCAGKL*PIGLLT
Trigger: AGTGAGGAGACCTATAGGCCAGAGTTTCCCAGCACA...TCGCATCTCACGCAGTCTCAGTGGCACCGTTGTCTCAGAGAGGGAGGAAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466048.6
3UTR-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGGGGCATCAGGACATCTaGGGACAGGAACTGTGGTTG +
Preference number: 2 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKGHQDI*GQELWL
Trigger: CAACCACAGTTCCTGTCCCCAGATGTCCTGATGCCC...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTGCTCCCCTGCCATGGTaGGCATCAGGACATCTGGGG +
Preference number: 2 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFAPLPW*ASGHLG
Trigger: CCCCAGATGTCCTGATGCCCACCATGGCAGGGGAGC...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
3UTR CAA 90 bp TTGTGGAGGGAGCTTGCTGCAACTGCTGTTGTCACACCTAGAGCCTaGCAGCTTACCCTCTGGGGCATCCAATGGCTCCCAACTATGATG +
Preference number: 2 (lower is better)
Translates to: LWRELAATAVVTPRA*QLTLWGIQWLPTMM
Trigger: CATCATAGTTGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGACAACAGCAGTTGCAGCAAGCTCCCTCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CAA 90 bp GCAATGCCTCTTCCTTCTTGTGGAGGGAGCTTGCTGCAACTGCTGTaGTCACACCTAGAGCCTTGCAGCTTACCCTCTGGGGCATCCAAT +
Preference number: 2 (lower is better)
Translates to: AMPLPSCGGSLLQLL*SHLEPCSLPSGASN
Trigger: ATTGGATGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CAA 90 bp GGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTaGAAGGACTACAGCCTAGGCTGTGTTCATCACCCCTCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: GGRFYTGEGWAELMN*KDYSLGCVHHPSQR
Trigger: CCTCTGAGAGGGGTGATGAACACAGCCTAGGCTGTAGTCCTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CAA 90 bp CTCTCCCACTGTTCTCCTGTGTCCAGAGTGGGAGGCATAACTGCTTaGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACC +
Preference number: 2 (lower is better)
Translates to: LSHCSPVSRVGGITA*PPVIIWGHIYSSRT
Trigger: GGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAAGCAGTTATGCCTCCCACTCTGGACACAGGAGAACAGTGGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR TCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCAATCTGTTCAAAAGGGTaGATGTTATGTTGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPICSKG*MLCWQL
Trigger: GAGCTGCCAACATAACATTCACCCTTTTGAACAGAT...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATGTTTACATTGACGACTaGGCAAGTGGCAATAATGGC +
Preference number: 2 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHVYIDD*ASGNNG
Trigger: GCCATTATTGCCACTTGCTCAGTCGTCAATGTAAAC...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGACCTTGCCTGTGGAATaGAGAGGGTTCAATGTTGTC +
Preference number: 2 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLTLPVE*RGFNVV
Trigger: GACAACATTGAACCCTCTGCATTCCACAGGCAAGGT...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp GGAGCTTCCTCCCTCTCTGAGACAACGGTGCCACTGAGACTGCGTGAGATGCGAACCTTGCCTGTGGAATaGAGAGGGTTCAATGTTGTC +
Preference number: 2 (lower is better)
Translates to: GASSLSETTVPLRLREMRTLPVE*RGFNVV
Trigger: GACAACATTGAACCCTCTGCATTCCACAGGCAAGGT...TCGCATCTCACGCAGTCTCAGTGGCACCGTTGTCTCAGAGAGGGAGGAAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466048.6
3UTR-3UTR GCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATAATTCTGAGGTCTCCTaGTCTGTGTCTTGGTTCCAA +
Preference number: 2 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHNSEVS*SVSWFQ
Trigger: TTGGAACCAAGACACAGAGCAGGAGACCTCAGAATT...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGGATGAGTGTGACTCATaGCAGGAAGCAGGTGAATGG +
Preference number: 2 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLDECDS*QEAGEW
Trigger: CCATTCACCTGCTTCCTGCCATGAGTCACACTCATC...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACTTGCAGCTTACCCTCTaGGGCATCCAATGGCTCCCA +
Preference number: 2 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNLQLTL*GIQWLP
Trigger: TGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAA...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCAAGCAACAGGCATTATaGGGTGGCAGGTTCTATACA +
Preference number: 2 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRKQQAL*GGRFYT
Trigger: TGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACCTCTTCCCAGGAAAGTaGTCTATCCCCACCCTCCAG +
Preference number: 2 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNLFPGK*SIPTLQ
Trigger: CTGGAGGGTGGGGATAGACCACTTTCCTGGGAAGAG...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGAGAAGAATGTTCAGTaGACTCTTCCCAGGAAAGTG +
Preference number: 2 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSREKNVQ*TLPRKV
Trigger: CACTTTCCTGGGAAGAGTCCACTGAACATTCTTCTC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTAGAGAGACCAGGATCATaGGCTGAGTGCAACCTCCTC +
Preference number: 2 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVERPGS*AECNLL
Trigger: GAGGAGGTTGCACTCAGCCCATGATCCTGGTCTCTC...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCTCCCAATATGCTGGTTaGTCTCTGACCAGGGTGCCC +
Preference number: 2 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFSQYAG*SLTRVP
Trigger: GGGCACCCTGGTCAGAGACCAACCAGCATATTGGGA...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCATGAAGACTGCTAGATaGTGGGTACACAGGATGAAC +
Preference number: 2 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRMKTAR*WVHRMN
Trigger: GTTCATCCTGTGTACCCACCATCTAGCAGTCTTCAT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR CAA 90 bp GCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTCTCTaGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTCCGCTAGA +
Preference number: 2 (lower is better)
Translates to: AQILRPNISHLGQLL*VYVWLCQPGLSSAR
Trigger: TCTAGCGGAGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCCCACCAATTCTATGTTaGGATGAGAATAGCACAACC +
Preference number: 2 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRPPILC*DENSTT
Trigger: GGTTGTGCTATTCTCATCTCAACATAGAATTGGTGG...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR TCA 90 bp GGAGCTTCCTCCCTCTCTGAGACAACGGTGCCACTGAGACTGCGTGAGATGCGAGTTTACATTGACGACTaGGCAAGTGGCAATAATGGC +
Preference number: 2 (lower is better)
Translates to: GASSLSETTVPLRLREMRVYIDD*ASGNNG
Trigger: GCCATTATTGCCACTTGCTCAGTCGTCAATGTAAAC...TCGCATCTCACGCAGTCTCAGTGGCACCGTTGTCTCAGAGAGGGAGGAAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466048.6
3UTR-3UTR TCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTAGGGGAAGGCTGGGCTaGGCTGATGAATTTGAAGGA +
Preference number: 2 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPRGRLG*ADEFEG
Trigger: TCCTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCT...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCAGGGGAAGGCTGGGCTaGGCTGATGAATTTGAAGGA +
Preference number: 2 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFRGRLG*ADEFEG
Trigger: TCCTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCT...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGCTTGTGGAGGGAGCTTaGTGCAACTGCTGTTGTCAC +
Preference number: 2 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKLVEGA*CNCCCH
Trigger: GTGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAG...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGGGGGTTTCACCATGTTaGCCAGGATGGTCTCAATCT +
Preference number: 2 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKGVSPC*PGWSQS
Trigger: AGATTGAGACCATCCTGGCCAACATGGTGAAACCCC...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR CCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGAGCCTTCCGAGTAGTTaGGACTACAGGCACGCACCG +
Preference number: 2 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWSLPSS*DYRHAP
Trigger: CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCT...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTTCAAGGCAGATCTACTaGGGGAGCTGTGCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: VSTAAQILRPNISHLGQLSRQIY*GSCAVG
Trigger: CCCCACAGCACAGCTCCCCCAGTAGATCTGCCTTGA...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCGGTAAACCTTGCCTGTaGAATGCAGAGGGTTCAATG +
Preference number: 2 (lower is better)
Translates to: WNCSARERTSPFVLGNSGGKPCL*NAEGSM
Trigger: CATTGAACCCTCTGCATTCCACAGGCAAGGTTTACC...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTAGCCTCTTCCTTCTTGTaGAGGGAGCTTGCTGCAACT +
Preference number: 2 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVASSFL*RELAAT
Trigger: AGTTGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGC...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACGCCTCTTCCTTCTTGTaGAGGGAGCTTGCTGCAACT +
Preference number: 2 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNASSFL*RELAAT
Trigger: AGTTGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGC...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGCACCCCTCTCAGAGGTaGCTATTCCAGGCATCACCG +
Preference number: 2 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWHPSQR*LFQASP
Trigger: CGGTGATGCCTGGAATAGCCACCTCTGAGAGGGGTG...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCCAAGCCCCTTTGTGCTaGGAAACTCTGGCCTATAGG +
Preference number: 2 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFQAPLC*ETLAYR
Trigger: CCTATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTG...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTACACCCTGCATCCTCTaGAACTGCTCAGCCAGAGAA +
Preference number: 2 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPTPCIL*NCSARE
Trigger: TTCTCTGGCTGAGCAGTTCCAGAGGATGCAGGGTGT...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGTTGTTGCTTTGCCCATaGCCAGTGGCCTTTCTCTTG +
Preference number: 2 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKLLLCP*PVAFLL
Trigger: CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAA...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGCTCCCCTGCCATGGTaGGCATCAGGACATCTGGGG +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCAPLPW*ASGHLG
Trigger: CCCCAGATGTCCTGATGCCCACCATGGCAGGGGAGC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCATGTCATCAGAACCATaGCCACAGGGCTACATGTCC +
Preference number: 2 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFMSSEP*PQGYMS
Trigger: GGACATGTAGCCCTGTGGTCATGGTTCTGATGACAT...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR TCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTACACGTATGGGAATCATaGGGGGAGGACTTCATTCCT +
Preference number: 2 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVHVWES*GEDFIP
Trigger: AGGAATGAAGTCCTCCCCTCATGATTCCCATACGTG...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCCAAACTCTGTATCCATaGCGGATTCCAGTTGGGCCT +
Preference number: 2 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFQTLYP*RIPVGP
Trigger: AGGCCCAACTGGAATCCGGCATGGATACAGAGTTTG...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGGCTTTAGGTAAACCTTaGCTGTGGAATGCAGAGGGT +
Preference number: 2 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKALGKP*LWNAEG
Trigger: ACCCTCTGCATTCCACAGGCAAGGTTTACCTAAAGC...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp AGATGCGACGTAAATTCTCTGCACTGTACTGCTCATCCTCCCCACACTCCCTGCAGAGGATTGTTGCTTTaGCCATGGCCAGTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: RCDVNSLHCTAHPPHTPCRGLLL*PWPVAF
Trigger: AAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCT...GCAGGGAGTGTGGGGAGGATGAGCAGTACAGTGCAGAGAATTTACGTCGCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
3UTR-3UTR CCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACGATGAGTGTGACTCATaGCAGGAAGCAGGTGAATGG +
Preference number: 2 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNDECDS*QEAGEW
Trigger: CCATTCACCTGCTTCCTGCCATGAGTCACACTCATC...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGTTGAGGCTTTGGCCTTaGAGGCATTGGTTAGTTTTC +
Preference number: 2 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLLRLWP*RHWLVF
Trigger: GAAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAA...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACTTGTTGCTTTGCCCATaGCCAGTGGCCTTTCTCTTG +
Preference number: 2 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNLLLCP*PVAFLL
Trigger: CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAA...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTAGAGAAGCCTGAAGACTaGCCTGATACAGAGACTCCA +
Preference number: 2 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVEKPED*PDTETP
Trigger: TGGAGTCTCTGTATCAGGCCAGTCTTCAGGCTTCTC...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCTCCTTCCTGTGTACTTaGCCCCTTGGGAAGTTTCAC +
Preference number: 2 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFSFLCT*PLGKFH
Trigger: GTGAAACTTCCCAAGGGGCCAAGTACACAGGAAGGA...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGTTGAGGATTGCACCCTaGAGTAGTCAGGAATCTGGT +
Preference number: 2 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKLRIAP*SSQESG
Trigger: ACCAGATTCCTGACTACTCCAGGGTGCAATCCTCAA...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR CCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCCCTCCAGTCATCATCTaGGGGCATATCTACTCTTCG +
Preference number: 2 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFPPVII*GHIYSS
Trigger: CGAAGAGTAGATATGCCCCCAGATGATGACTGGAGG...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR CAA 90 bp TACGCACTGTTCTGGCTTCATGGAGACCATGCTCCATTTCTGCTGTaGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCC +
Preference number: 2 (lower is better)
Translates to: YALFWLHGDHAPFLL*KSLRDQDHGLSATS
Trigger: GGAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAATGGAGCATGGTCTCCATGAAGCCAGAACAGTGCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTGCACAACCATGGCAGTaGTGCAGGGTACCAACGCTG +
Preference number: 2 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISAQPWQ*CRVPTL
Trigger: CAGCGTTGGTACCCTGCATCACTGCCATGGTTGTGC...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCCCACCAATTCTATGTTaGGATGAGAATAGCACAACC +
Preference number: 2 (lower is better)
Translates to: WNCSARERTSPFVLGNSGPPILC*DENSTT
Trigger: GGTTGTGCTATTCTCATCTCAACATAGAATTGGTGG...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTGGGCACAGGGAATGCTaGCAGGCCATAATACCTGGG +
Preference number: 2 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISGHREC*QAIIPG
Trigger: CCCAGGTATTATGGCCTGTCAGCATTCCCTGTGCCC...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGGGCACAGGGAATGCTaGCAGGCCATAATACCTGGG +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCGHREC*QAIIPG
Trigger: CCCAGGTATTATGGCCTGTCAGCATTCCCTGTGCCC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR TCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGGTTTACATTGACGACTaGGCAAGTGGCAATAATGGC +
Preference number: 2 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKVYIDD*ASGNNG
Trigger: GCCATTATTGCCACTTGCTCAGTCGTCAATGTAAAC...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR TCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTAGGGGAAGGCTGGGCTaGGCTGATGAATTTGAAGGA +
Preference number: 2 (lower is better)
Translates to: VSTAAQILRPNISHLGQLRGRLG*ADEFEG
Trigger: TCCTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCT...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGACAGGATCAGGACAGTaGAGCACAAATGAAGAAGCA +
Preference number: 2 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKTGSGQ*STNEEA
Trigger: TGCTTCTTCATTTGTGCTTCACTGTCCTGATCCTGT...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCCAGTGGCCTTTCTCTTaGCCCTGTGAGAAAGGAGGC +
Preference number: 2 (lower is better)
Translates to: ISAVEVFERPGSWAECNLQWPFS*PCEKGG
Trigger: GCCTCCTTTCTCACAGGGTCAAGAGAAAGGCCACTG...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCACAGTGGCCTTTCTCTTaGCCCTGTGAGAAAGGAGGC +
Preference number: 2 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPQWPFS*PCEKGG
Trigger: GCCTCCTTTCTCACAGGGTCAAGAGAAAGGCCACTG...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTACCAGGATCATGGGCTaGGTGCAACCTCCTCCCCAT +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCTRIMG*VQPPPH
Trigger: ATGGGGAGGAGGTTGCACTCAGCCCATGATCCTGGT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGGCAGGGTACCAACGCTaGCACAGTAGTTTATTTTGT +
Preference number: 2 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKAGYQR*HSSLFC
Trigger: ACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGC...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR GCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTCTATTGGGCTCCCCTaGCATGGTGGGCATCAGGAC +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCSIGLP*HGGHQD
Trigger: GTCCTGATGCCCACCATGGCAGGGGAGCCCAATAGA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGAGCCTTCCGAGTAGTTaGGACTACAGGCACGCACCG +
Preference number: 2 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWSLPSS*DYRHAP
Trigger: CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGGGCTCAGGTGGAGGTaGGGACATAAAGCATCCAGG +
Preference number: 2 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWGLRWR*GHKASR
Trigger: CCTGGATGCTTTATGTCCCCACCTCCACCTGAGCCC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGGGCTCAGGTGGAGGTaGGGACATAAAGCATCCAGG +
Preference number: 2 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVGLRWR*GHKASR
Trigger: CCTGGATGCTTTATGTCCCCACCTCCACCTGAGCCC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR CCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACTATACAGGGGAAGGCTaGGCTGAGCTGATGAATTTG +
Preference number: 2 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNYTGEG*AELMNL
Trigger: CAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATA...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGACACCCTGCATCCTCTaGAACTGCTCAGCCAGAGAA +
Preference number: 2 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWTPCIL*NCSARE
Trigger: TTCTCTGGCTGAGCAGTTCCAGAGGATGCAGGGTGT...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGCCTGTTTGGCTAAGTaGGTGCCAGGCGGTATCCTG +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCACLAK*VPGGIL
Trigger: CAGGATACCGCCTGGCACCCACTTAGCCAAACAGGC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGACTGTTCTGGCTTCATaGAGACCATGCTCCATTTCT +
Preference number: 2 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKTVLAS*RPCSIS
Trigger: AGAAATGGAGCATGGTCTCCATGAAGCCAGAACAGT...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCTTGAGGATTGCACCCTaGAGTAGTCAGGAATCTGGT +
Preference number: 2 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFLRIAP*SSQESG
Trigger: ACCAGATTCCTGACTACTCCAGGGTGCAATCCTCAA...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR CAA 90 bp CTTCTTTTCTTGGAACAGCTGTTCTTGAGCAATGCCTCTTCCTTCTaGTGGAGGGAGCTTGCTGCAACTGCTGTTGTCACACCTAGAGCC +
Preference number: 2 (lower is better)
Translates to: LLFLEQLFLSNASSF*WRELAATAVVTPRA
Trigger: GGCTCTAGGTGTGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGCATTGCTCAAGAACAGCTGTTCCAAGAAAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGATCTGTTCAAAAGGGTaGATGTTATGTTGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKICSKG*MLCWQL
Trigger: GAGCTGCCAACATAACATTCACCCTTTTGAACAGAT...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR TCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTAACAGGATCAGGACAGTaGAGCACAAATGAAGAAGCA +
Preference number: 2 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVTGSGQ*STNEEA
Trigger: TGCTTCTTCATTTGTGCTTCACTGTCCTGATCCTGT...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp AGATGCGACGTAAATTCTCTGCACTGTACTGCTCATCCTCCCCACACTCCCTGCACAGGATCAGGACAGTaGAGCACAAATGAAGAAGCA +
Preference number: 2 (lower is better)
Translates to: RCDVNSLHCTAHPPHTPCTGSGQ*STNEEA
Trigger: TGCTTCTTCATTTGTGCTTCACTGTCCTGATCCTGT...GCAGGGAGTGTGGGGAGGATGAGCAGTACAGTGCAGAGAATTTACGTCGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
3UTR-3UTR TCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTATTTCTCTTGACCCTGTaGGAAAGGAGGCTTAGAATC +
Preference number: 2 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVFLLTL*ERRLRI
Trigger: GATTCTAAGCCTCCTTTCTCACAGGGTCAAGAGAAA...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTCAGTGGCCTTTCTCTTaGCCCTGTGAGAAAGGAGGC +
Preference number: 2 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISQWPFS*PCEKGG
Trigger: GCCTCCTTTCTCACAGGGTCAAGAGAAAGGCCACTG...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTAACGTTTGATGAATCCTaGGAAGTACGCACTGTTCTG +
Preference number: 2 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVTFDES*EVRTVL
Trigger: CAGAACAGTGCGTACTTCTCAGGATTCATCAAACGT...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418501.5
ENST00000424265.5
3UTR-3UTR TCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGACCTCAGGGGTACATaGAGACTGCTAGATGGTGGG +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCDLRGT*RLLDGG
Trigger: CCCACCATCTAGCAGTCTTCATGTACCCCTGAGGTC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR GCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTGCAGGGTACCAACGCTaGCACAGTAGTTTATTTTGT +
Preference number: 2 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPAGYQR*HSSLFC
Trigger: ACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGC...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTAAGGCTGTGTTAGTGTaGCTGACTCCATCTGTTCAA +
Preference number: 2 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPKAVLV*LTPSVQ
Trigger: TTGAACAGATGGAGTCAGGCACACTAACACAGCCTT...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTTGCATCCTCTGGAACTaGTCAGCCAGAGAACGGACA +
Preference number: 2 (lower is better)
Translates to: SWPRCPMLKLRITEPCDICILWN*SARERT
Trigger: TGTCCGTTCTCTGGCTGAGCAGTTCCAGAGGATGCA...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCTGCATCCTCTGGAACTaGTCAGCCAGAGAACGGACA +
Preference number: 2 (lower is better)
Translates to: ISAVEVFERPGSWAECNLCILWN*SARERT
Trigger: TGTCCGTTCTCTGGCTGAGCAGTTCCAGAGGATGCA...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTAGAGGATTGTTGCTTTaGCCATGGCCAGTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFRGLLL*PWPVAF
Trigger: AAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCT...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTAGAGGATTGTTGCTTTaGCCATGGCCAGTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: VSTAAQILRPNISHLGQLRGLLL*PWPVAF
Trigger: AAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCT...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGTATATGTCTGGCTCTaGCAACCTGGGCTGTCCTCC +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCVYVWL*QPGLSS
Trigger: GGAGGACAGCCCAGGTTGGCAGAGCCAGACATATAC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTGTATATGTCTGGCTCTaGCAACCTGGGCTGTCCTCC +
Preference number: 2 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISVYVWL*QPGLSS
Trigger: GGAGGACAGCCCAGGTTGGCAGAGCCAGACATATAC...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTCCTCCCCATGCCATCTaGAGAGCCTGTTTGGCTAAG +
Preference number: 2 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVPPHAI*RACLAK
Trigger: CTTAGCCAAACAGGCTCTGCAGATGGCATGGGGAGG...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGAGCTGGAACAACGGTaGCCGGTTTCCAAAGGCTTC +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCELEQR*PVSKGF
Trigger: GAAGCCTTTGGAAACCGGGCACCGTTGTTCCAGCTC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAAGCCTTCCGAGTAGTTaGGACTACAGGCACGCACCG +
Preference number: 2 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPSLPSS*DYRHAP
Trigger: CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR CCA 90 bp GTTTCCAAAGGCTTCCTCACGTTTGATGAATCAAAACTGTGGGAAGAAACCGGAAGCCTTCCGAGTAGTTaGGACTACAGGCACGCACCG +
Preference number: 2 (lower is better)
Translates to: VSKGFLTFDESKLWEETGSLPSS*DYRHAP
Trigger: CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCT...TCCGGTTTCTTCCCACAGTTTTGATTCATCAAACGTGAGGAAGCCTTTGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
3UTR-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGAGGGGGAATGGAAGTTaGAATTTCAAATATCCCCTC +
Preference number: 2 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKRGNGS*NFKYPL
Trigger: GAGGGGATATTTGAAATTCCAACTTCCATTCCCCCT...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGGGCTCAGGTGGAGGTaGGGACATAAAGCATCCAGG +
Preference number: 2 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWGLRWR*GHKASR
Trigger: CCTGGATGCTTTATGTCCCCACCTCCACCTGAGCCC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGTCAAGGCAGATCTACTaGGGGAGCTGTGCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWSRQIY*GSCAVG
Trigger: CCCCACAGCACAGCTCCCCCAGTAGATCTGCCTTGA...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTCTCTGGGGCATCCAATaGCTCCCAACTATGATGAGA +
Preference number: 2 (lower is better)
Translates to: VSTAAQILRPNISHLGQLLWGIQ*LPTMMR
Trigger: TCTCATCATAGTTGGGAGCCATTGGATGCCCCAGAG...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGCACCCCTCTCAGAGGTaGCTATTCCAGGCATCACCG +
Preference number: 2 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWHPSQR*LFQASP
Trigger: CGGTGATGCCTGGAATAGCCACCTCTGAGAGGGGTG...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTTTGAGGCTTTGGCCTTaGAGGCATTGGTTAGTTTTC +
Preference number: 2 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPLRLWP*RHWLVF
Trigger: GAAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAA...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCCAAGCCCCTTTGTGCTaGGAAACTCTGGCCTATAGG +
Preference number: 2 (lower is better)
Translates to: ISAVEVFERPGSWAECNLQAPLC*ETLAYR
Trigger: CCTATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTG...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCAACACCCTGCATCCTCTaGAACTGCTCAGCCAGAGAA +
Preference number: 2 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPTPCIL*NCSARE
Trigger: TTCTCTGGCTGAGCAGTTCCAGAGGATGCAGGGTGT...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTCTGTACTATCCCTCATaGAGACACCCTGCATCCTCT +
Preference number: 2 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFLYYPS*RHPASS
Trigger: AGAGGATGCAGGGTGTCTCCATGAGGGATAGTACAG...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp AGATGCGACGTAAATTCTCTGCACTGTACTGCTCATCCTCCCCACACTCCCTGCGAGAAGAATGTTCAGTaGACTCTTCCCAGGAAAGTG +
Preference number: 2 (lower is better)
Translates to: RCDVNSLHCTAHPPHTPCEKNVQ*TLPRKV
Trigger: CACTTTCCTGGGAAGAGTCCACTGAACATTCTTCTC...GCAGGGAGTGTGGGGAGGATGAGCAGTACAGTGCAGAGAATTTACGTCGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
3UTR-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTCCCAATATGCTGGTTaGTCTCTGACCAGGGTGCCC +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCSQYAG*SLTRVP
Trigger: GGGCACCCTGGTCAGAGACCAACCAGCATATTGGGA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTCCCAATATGCTGGTTaGTCTCTGACCAGGGTGCCC +
Preference number: 2 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVSQYAG*SLTRVP
Trigger: GGGCACCCTGGTCAGAGACCAACCAGCATATTGGGA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGTTCTTTCTGGTAGTGTaGCAGTGTAGGTTAGTTGAG +
Preference number: 2 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKFFLVV*QCRLVE
Trigger: CTCAACTAACCTACACTGCCACACTACCAGAAAGAA...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR CCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCATGAAGACTGCTAGATaGTGGGTACACAGGATGAAC +
Preference number: 2 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFMKTAR*WVHRMN
Trigger: GTTCATCCTGTGTACCCACCATCTAGCAGTCTTCAT...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR TCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACATCTGTTCAAAAGGGTaGATGTTATGTTGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNICSKG*MLCWQL
Trigger: GAGCTGCCAACATAACATTCACCCTTTTGAACAGAT...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCATCTGTTCAAAAGGGTaGATGTTATGTTGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFICSKG*MLCWQL
Trigger: GAGCTGCCAACATAACATTCACCCTTTTGAACAGAT...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR TCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGTGGAACAGCTGTTCTTaGGCAATGCCTCTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWWNSCS*AMPLPS
Trigger: AGAAGGAAGAGGCATTGCTCAAGAACAGCTGTTCCA...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCAATCACAGAACCTTGTaGTATTCACCCAGGAATCCA +
Preference number: 2 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFNHRTL*YSPRNP
Trigger: TGGATTCCTGGGTGAATATCACAAGGTTCTGTGATT...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCGCCCCATGCTTAAGCTaGGAATCACAGAACCTTGTG +
Preference number: 2 (lower is better)
Translates to: ISAVEVFERPGSWAECNLAPCLS*ESQNLV
Trigger: CACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGC...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTGCTTTAGGTAAACCTTaGCTGTGGAATGCAGAGGGT +
Preference number: 2 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFALGKP*LWNAEG
Trigger: ACCCTCTGCATTCCACAGGCAAGGTTTACCTAAAGC...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGTCACACCTAGAGCCTTaGAGCTTACCCTCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWSHLEP*SLPSGA
Trigger: TGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGA...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATCACACCTAGAGCCTTaGAGCTTACCCTCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPSHLEP*SLPSGA
Trigger: TGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTCTTGTGGAGGGAGCTTaGTGCAACTGCTGTTGTCAC +
Preference number: 2 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISLVEGA*CNCCCH
Trigger: GTGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAG...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGGACAAGCCCCTTTGTaGTGGGAAACTCTGGCCTAT +
Preference number: 2 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWGQAPL*WETLAY
Trigger: ATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCGGGGTTTCACCATGTTaGCCAGGATGGTCTCAATCT +
Preference number: 2 (lower is better)
Translates to: ISAVEVFERPGSWAECNLGVSPC*PGWSQS
Trigger: AGATTGAGACCATCCTGGCCAACATGGTGAAACCCC...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTAGGGGGAATGGAAGTTaGAATTTCAAATATCCCCTC +
Preference number: 2 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPRGNGS*NFKYPL
Trigger: GAGGGGATATTTGAAATTCCAACTTCCATTCCCCCT...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTGATGAGTGTGACTCATaGCAGGAAGCAGGTGAATGG +
Preference number: 2 (lower is better)
Translates to: SWPRCPMLKLRITEPCDIDECDS*QEAGEW
Trigger: CCATTCACCTGCTTCCTGCCATGAGTCACACTCATC...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTGGTAAACCTTGCCTGTaGAATGCAGAGGGTTCAATG +
Preference number: 2 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFGKPCL*NAEGSM
Trigger: CATTGAACCCTCTGCATTCCACAGGCAAGGTTTACC...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCTCTGGGGCATCCAATaGCTCCCAACTATGATGAGA +
Preference number: 2 (lower is better)
Translates to: SWPRCPMLKLRITEPCDILWGIQ*LPTMMR
Trigger: TCTCATCATAGTTGGGAGCCATTGGATGCCCCAGAG...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATTGCAGCTTACCCTCTaGGGCATCCAATGGCTCCCA +
Preference number: 2 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPLQLTL*GIQWLP
Trigger: TGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTTGTGCTGGGAAACTCTaGCCTATAGGTCTCCTCACT +
Preference number: 2 (lower is better)
Translates to: SWPRCPMLKLRITEPCDICAGKL*PIGLLT
Trigger: AGTGAGGAGACCTATAGGCCAGAGTTTCCCAGCACA...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCAAGCCCCTTTGTGCTaGGAAACTCTGGCCTATAGG +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCQAPLC*ETLAYR
Trigger: CCTATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCTCTTGGTATATGTCTaGCTCTGCCAACCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCLLVYV*LCQPGL
Trigger: CAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCCTAACATCTCTCACTTaGGACAGCTTCTCTTGGTAT +
Preference number: 2 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFLTSLT*DSFSWY
Trigger: ATACCAAGAGAAGCTGTCCCAAGTGAGAGATGTTAG...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp AGATGCGACGTAAATTCTCTGCACTGTACTGCTCATCCTCCCCACACTCCCTGCCTAACATCTCTCACTTaGGACAGCTTCTCTTGGTAT +
Preference number: 2 (lower is better)
Translates to: RCDVNSLHCTAHPPHTPCLTSLT*DSFSWY
Trigger: ATACCAAGAGAAGCTGTCCCAAGTGAGAGATGTTAG...GCAGGGAGTGTGGGGAGGATGAGCAGTACAGTGCAGAGAATTTACGTCGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
3UTR-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTCTGGTCCCAATATGCTaGTTGGTCTCTGACCAGGGT +
Preference number: 2 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVLVPIC*LVSDQG
Trigger: ACCCTGGTCAGAGACCAACCAGCATATTGGGACCAG...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCTGGTCCCAATATGCTaGTTGGTCTCTGACCAGGGT +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCLVPIC*LVSDQG
Trigger: ACCCTGGTCAGAGACCAACCAGCATATTGGGACCAG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR CCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCTTCTTTCTGGTAGTGTaGCAGTGTAGGTTAGTTGAG +
Preference number: 2 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFFFLVV*QCRLVE
Trigger: CTCAACTAACCTACACTGCCACACTACCAGAAAGAA...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGGGTGGGAGGGTGAATaGAAAAGATCACTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVGWEGE*KRSLQD
Trigger: GTCCTGGAGTGATCTTTTCCATTCACCCTCCCACCC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGGGTGGGAGGGTGAATaGAAAAGATCACTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCGWEGE*KRSLQD
Trigger: GTCCTGGAGTGATCTTTTCCATTCACCCTCCCACCC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR CAA 90 bp GAAGGGGAAGAGTTCTTCCTTAGACTACCTGACAAACTTCTATCCTaGAAACCTGTACTATCCCTCATGGAGACACCCTGCATCCTCTGG +
Preference number: 2 (lower is better)
Translates to: EGEEFFLRLPDKLLS*KPVLSLMETPCILW
Trigger: CCAGAGGATGCAGGGTGTCTCCATGAGGGATAGTACAGGTTTCAAGGATAGAAGTTTGTCAGGTAGTCTAAGGAAGAACTCTTCCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGGCACAACCATGGCAGTaGTGCAGGGTACCAACGCTG +
Preference number: 2 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGAQPWQ*CRVPTL
Trigger: CAGCGTTGGTACCCTGCATCACTGCCATGGTTGTGC...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTATGTCATCAGAACCATaGCCACAGGGCTACATGTCC +
Preference number: 2 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVMSSEP*PQGYMS
Trigger: GGACATGTAGCCCTGTGGTCATGGTTCTGATGACAT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR TCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTATGTCATCAGAACCATaGCCACAGGGCTACATGTCC +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCMSSEP*PQGYMS
Trigger: GGACATGTAGCCCTGTGGTCATGGTTCTGATGACAT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR TCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTTTTCTCTTGACCCTGTaGGAAAGGAGGCTTAGAATC +
Preference number: 2 (lower is better)
Translates to: VSTAAQILRPNISHLGQLFLLTL*ERRLRI
Trigger: GATTCTAAGCCTCCTTTCTCACAGGGTCAAGAGAAA...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTGCTTTAGGTAAACCTTaGCTGTGGAATGCAGAGGGT +
Preference number: 2 (lower is better)
Translates to: SWPRCPMLKLRITEPCDIALGKP*LWNAEG
Trigger: ACCCTCTGCATTCCACAGGCAAGGTTTACCTAAAGC...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGCTCATGGAGACACCCTaGATCCTCTGGAACTGCTCA +
Preference number: 2 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWLMETP*ILWNCS
Trigger: TGAGCAGTTCCAGAGGATGCAGGGTGTCTCCATGAG...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTAGAGGATTGTTGCTTTaGCCATGGCCAGTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVRGLLL*PWPVAF
Trigger: AAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGGGGTTTCACCATGTTaGCCAGGATGGTCTCAATCT +
Preference number: 2 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWGVSPC*PGWSQS
Trigger: AGATTGAGACCATCCTGGCCAACATGGTGAAACCCC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR CCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTGGGGTTTCACCATGTTaGCCAGGATGGTCTCAATCT +
Preference number: 2 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISGVSPC*PGWSQS
Trigger: AGATTGAGACCATCCTGGCCAACATGGTGAAACCCC...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGGGGTTTCACCATGTTaGCCAGGATGGTCTCAATCT +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCGVSPC*PGWSQS
Trigger: AGATTGAGACCATCCTGGCCAACATGGTGAAACCCC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGAGCCTTCCGAGTAGTTaGGACTACAGGCACGCACCG +
Preference number: 2 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGSLPSS*DYRHAP
Trigger: CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGATGAGTGTGACTCATaGCAGGAAGCAGGTGAATGG +
Preference number: 2 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWDECDS*QEAGEW
Trigger: CCATTCACCTGCTTCCTGCCATGAGTCACACTCATC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTCAAGGCAGATCTACTaGGGGAGCTGTGCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGSRQIY*GSCAVG
Trigger: CCCCACAGCACAGCTCCCCCAGTAGATCTGCCTTGA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCGGTAAACCTTGCCTGTaGAATGCAGAGGGTTCAATG +
Preference number: 2 (lower is better)
Translates to: ISAVEVFERPGSWAECNLGKPCL*NAEGSM
Trigger: CATTGAACCCTCTGCATTCCACAGGCAAGGTTTACC...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCTCTGGGGCATCCAATaGCTCCCAACTATGATGAGA +
Preference number: 2 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWLWGIQ*LPTMMR
Trigger: TCTCATCATAGTTGGGAGCCATTGGATGCCCCAGAG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGCCTCTTCCTTCTTGTaGAGGGAGCTTGCTGCAACT +
Preference number: 2 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWASSFL*RELAAT
Trigger: AGTTGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TGCCCGGTTTCCAAAGGCTTCCTCACGTTTGATGAATCAAAACTGTGGGAAGAAACAGGCATTATGGGGTaGCAGGTTCTATACAGGGGA +
Preference number: 2 (lower is better)
Translates to: CPVSKGFLTFDESKLWEETGIMG*QVLYRG
Trigger: TCCCCTGTATAGAACCTGCCACCCCATAATGCCTGT...TTCTTCCCACAGTTTTGATTCATCAAACGTGAGGAAGCCTTTGGAAACCGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000466048.6
3UTR-3UTR CCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTAAGCAACAGGCATTATaGGGTGGCAGGTTCTATACA +
Preference number: 2 (lower is better)
Translates to: VSTAAQILRPNISHLGQLKQQAL*GGRFYT
Trigger: TGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTAAGCAACAGGCATTATaGGGTGGCAGGTTCTATACA +
Preference number: 2 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFKQQAL*GGRFYT
Trigger: TGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTGAAGTTTTGAGGCTTTaGCCTTGGAGGCATTGGTTA +
Preference number: 2 (lower is better)
Translates to: VSTAAQILRPNISHLGQLEVLRL*PWRHWL
Trigger: TAACCAATGCCTCCAAGGCCAAAGCCTCAAAACTTC...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGCAAGCCCCTTTGTGCTaGGAAACTCTGGCCTATAGG +
Preference number: 2 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWQAPLC*ETLAYR
Trigger: CCTATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTG...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTCTGTACTATCCCTCATaGAGACACCCTGCATCCTCT +
Preference number: 2 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISLYYPS*RHPASS
Trigger: AGAGGATGCAGGGTGTCTCCATGAGGGATAGTACAG...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTCTGTACTATCCCTCATaGAGACACCCTGCATCCTCT +
Preference number: 2 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVLYYPS*RHPASS
Trigger: AGAGGATGCAGGGTGTCTCCATGAGGGATAGTACAG...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CAA 90 bp GGTGCTTTAGGTAAACCTTGCCTGTGGAATGCAGAGGGTTCAATGTaGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTG +
Preference number: 2 (lower is better)
Translates to: GALGKPCLWNAEGSM*STSTEVRSFKADLL
Trigger: CAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGAACCCTCTGCATTCCACAGGCAAGGTTTACCTAAAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTGGAACAGCTGTTCTTaGGCAATGCCTCTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVWNSCS*AMPLPS
Trigger: AGAAGGAAGAGGCATTGCTCAAGAACAGCTGTTCCA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCAACAGGATCAGGACAGTaGAGCACAAATGAAGAAGCA +
Preference number: 2 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPTGSGQ*STNEEA
Trigger: TGCTTCTTCATTTGTGCTTCACTGTCCTGATCCTGT...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCGCAGGGTACCAACGCTaGCACAGTAGTTTATTTTGT +
Preference number: 2 (lower is better)
Translates to: ISAVEVFERPGSWAECNLAGYQR*HSSLFC
Trigger: ACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGC...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTAAGGCTGTGTTAGTGTaGCTGACTCCATCTGTTCAA +
Preference number: 2 (lower is better)
Translates to: SWPRCPMLKLRITEPCDIKAVLV*LTPSVQ
Trigger: TTGAACAGATGGAGTCAGGCACACTAACACAGCCTT...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTGCTGTTCTTGAGCAATaGCTCTTCCTTCTTGTGGAG +
Preference number: 2 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISAVLEQ*LFLLVE
Trigger: CTCCACAAGAAGGAAGAGGCATTGCTCAAGAACAGC...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTAGTGGGAGGCATAACTaGTTTGCCTCCAGTCATCAT +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCSGRHN*FASSHH
Trigger: ATGATGACTGGAGGCAAAGCAGTTATGCCTCCCACT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR CCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTAGGGGGAATGGAAGTTaGAATTTCAAATATCCCCTC +
Preference number: 2 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFRGNGS*NFKYPL
Trigger: GAGGGGATATTTGAAATTCCAACTTCCATTCCCCCT...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGGTAAACCTTGCCTGTaGAATGCAGAGGGTTCAATG +
Preference number: 2 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVGKPCL*NAEGSM
Trigger: CATTGAACCCTCTGCATTCCACAGGCAAGGTTTACC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTATACAGGGGAAGGCTaGGCTGAGCTGATGAATTTG +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCYTGEG*AELMNL
Trigger: CAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGTATACAGGGGAAGGCTaGGCTGAGCTGATGAATTTG +
Preference number: 2 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKYTGEG*AELMNL
Trigger: CAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATA...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCGAAGTTTTGAGGCTTTaGCCTTGGAGGCATTGGTTA +
Preference number: 2 (lower is better)
Translates to: ISAVEVFERPGSWAECNLEVLRL*PWRHWL
Trigger: TAACCAATGCCTCCAAGGCCAAAGCCTCAAAACTTC...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTAAGTACGCACTGTTCTaGCTTCATGGAGACCATGCT +
Preference number: 2 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVKYALF*LHGDHA
Trigger: AGCATGGTCTCCATGAAGCCAGAACAGTGCGTACTT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTTACATTGACGACTaGGCAAGTGGCAATAATGGC +
Preference number: 2 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVVYIDD*ASGNNG
Trigger: GCCATTATTGCCACTTGCTCAGTCGTCAATGTAAAC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGTTTACATTGACGACTaGGCAAGTGGCAATAATGGC +
Preference number: 2 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWVYIDD*ASGNNG
Trigger: GCCATTATTGCCACTTGCTCAGTCGTCAATGTAAAC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR TCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGAACAGCTGTTCTTaGGCAATGCCTCTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPWNSCS*AMPLPS
Trigger: AGAAGGAAGAGGCATTGCTCAAGAACAGCTGTTCCA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTACAGTGAAGCACAAATaGAGAAGCAACAGGCATTAT +
Preference number: 2 (lower is better)
Translates to: VSTAAQILRPNISHLGQLTVKHK*RSNRHY
Trigger: ATAATGCCTGTTGCTTCTTCATTTGTGCTTCACTGT...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGACAAACTTCTATCCTTaGAACCTGTACTATCCCTCA +
Preference number: 2 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWTNFYP*NLYYPS
Trigger: TGAGGGATAGTACAGGTTTCAAGGATAGAAGTTTGT...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGACCTTGCCTGTGGAATaGAGAGGGTTCAATGTTGTC +
Preference number: 2 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWTLPVE*RGFNVV
Trigger: GACAACATTGAACCCTCTGCATTCCACAGGCAAGGT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCAAGGGGGAATGGAAGTTaGAATTTCAAATATCCCCTC +
Preference number: 2 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPRGNGS*NFKYPL
Trigger: GAGGGGATATTTGAAATTCCAACTTCCATTCCCCCT...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTCACCCCTCTCAGAGGTaGCTATTCCAGGCATCACCG +
Preference number: 2 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPHPSQR*LFQASP
Trigger: CGGTGATGCCTGGAATAGCCACCTCTGAGAGGGGTG...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTATGAAGACTGCTAGATaGTGGGTACACAGGATGAAC +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCMKTAR*WVHRMN
Trigger: GTTCATCCTGTGTACCCACCATCTAGCAGTCTTCAT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR TCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGCCACCAATTCTATGTTaGGATGAGAATAGCACAACC +
Preference number: 2 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKPPILC*DENSTT
Trigger: GGTTGTGCTATTCTCATCTCAACATAGAATTGGTGG...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTATCTGTTCAAAAGGGTaGATGTTATGTTGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCICSKG*MLCWQL
Trigger: GAGCTGCCAACATAACATTCACCCTTTTGAACAGAT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTAATCACAGAACCTTGTaGTATTCACCCAGGAATCCA +
Preference number: 2 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVNHRTL*YSPRNP
Trigger: TGGATTCCTGGGTGAATATCACAAGGTTCTGTGATT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTAATCACAGAACCTTGTaGTATTCACCCAGGAATCCA +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCNHRTL*YSPRNP
Trigger: TGGATTCCTGGGTGAATATCACAAGGTTCTGTGATT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCAAACTCTGTATCCATaGCGGATTCCAGTTGGGCCT +
Preference number: 2 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGQTLYP*RIPVGP
Trigger: AGGCCCAACTGGAATCCGGCATGGATACAGAGTTTG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGACAGGCATTATGGGGTaGCAGGTTCTATACAGGGGA +
Preference number: 2 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGTGIMG*QVLYRG
Trigger: TCCCCTGTATAGAACCTGCCACCCCATAATGCCTGT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTTCTTTCTGGTAGTGTaGCAGTGTAGGTTAGTTGAG +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCFFLVV*QCRLVE
Trigger: CTCAACTAACCTACACTGCCACACTACCAGAAAGAA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR GCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTCTTGTGGAGGGAGCTTaGTGCAACTGCTGTTGTCAC +
Preference number: 2 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPLVEGA*CNCCCH
Trigger: GTGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAG...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGAGGGGGAATGGAAGTTaGAATTTCAAATATCCCCTC +
Preference number: 2 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWRGNGS*NFKYPL
Trigger: GAGGGGATATTTGAAATTCCAACTTCCATTCCCCCT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTACAAAGAGTAGAAGTTaGGAGTATAGTAGGGAACAG +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCTKSRS*EYSREQ
Trigger: CTGTTCCCTACTATACTCCCAACTTCTACTCTTTGT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGTCTTGGTTCCAATGTaGATGCAAAAGGATGTGATT +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCVLVPM*MQKDVI
Trigger: AATCACATCCTTTTGCATCCACATTGGAACCAAGAC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR GCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGGCAGGGTACCAACGCTaGCACAGTAGTTTATTTTGT +
Preference number: 2 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGAGYQR*HSSLFC
Trigger: ACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGC...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR GCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTCAAACTCTGTATCCATaGCGGATTCCAGTTGGGCCT +
Preference number: 2 (lower is better)
Translates to: WKLEFQISPPKESHLFRGQTLYP*RIPVGP
Trigger: AGGCCCAACTGGAATCCGGCATGGATACAGAGTTTG...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTACTCTGGGGCATCCAATaGCTCCCAACTATGATGAGA +
Preference number: 2 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVLWGIQ*LPTMMR
Trigger: TCTCATCATAGTTGGGAGCCATTGGATGCCCCAGAG...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTATGTGCTGGGAAACTCTaGCCTATAGGTCTCCTCACT +
Preference number: 2 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVCAGKL*PIGLLT
Trigger: AGTGAGGAGACCTATAGGCCAGAGTTTCCCAGCACA...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR TCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCCACCAATTCTATGTTaGGATGAGAATAGCACAACC +
Preference number: 2 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGPPILC*DENSTT
Trigger: GGTTGTGCTATTCTCATCTCAACATAGAATTGGTGG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR GCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGCTGTTCTTGAGCAATaGCTCTTCCTTCTTGTGGAG +
Preference number: 2 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPAVLEQ*LFLLVE
Trigger: CTCCACAAGAAGGAAGAGGCATTGCTCAAGAACAGC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGGTAATAGGGATAGGTaGATAAAACAAAGAGTAGAA +
Preference number: 2 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCGNRDR*IKQRVE
Trigger: TTCTACTCTTTGTTTTATCCACCTATCCCTATTACC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGGTAATAGGGATAGGTaGATAAAACAAAGAGTAGAA +
Preference number: 2 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWGNRDR*IKQRVE
Trigger: TTCTACTCTTTGTTTTATCCACCTATCCCTATTACC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR GCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGCAGGGTACCAACGCTaGCACAGTAGTTTATTTTGT +
Preference number: 2 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPAGYQR*HSSLFC
Trigger: ACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR TCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTACCACCAATTCTATGTTaGGATGAGAATAGCACAACC +
Preference number: 2 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVPPILC*DENSTT
Trigger: GGTTGTGCTATTCTCATCTCAACATAGAATTGGTGG...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR CAA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCATTGCTGCAACTGCTGTaGTCACACCTAGAGCCTTGC +
Preference number: 3 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPLLQLL*SHLEPC
Trigger: GCAAGGCTCTAGGTGTGACAACAGCAGTTGCAGCAA...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATAATGCCTCTTCCTTCTaGTGGAGGGAGCTTGCTGCA +
Preference number: 3 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHNASSF*WRELAA
Trigger: TGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGCATT...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGAACGGACAAGCCCCTTaGTGCTGGGAAACTCTGGCC +
Preference number: 3 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLNGQAP*CWETLA
Trigger: GGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTT...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp GGAGCTTCCTCCCTCTCTGAGACAACGGTGCCACTGAGACTGCGTGAGATGCGAACCCTCCAGAGAGGATaGTTGCTTTGCCCATGGCCA +
Preference number: 3 (lower is better)
Translates to: GASSLSETTVPLRLREMRTLQRG*LLCPWP
Trigger: TGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGT...TCGCATCTCACGCAGTCTCAGTGGCACCGTTGTCTCAGAGAGGGAGGAAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466048.6
3UTR GCA 72 bp CTGCGTGAGATGCGACGTAAATTCTCTGCACTGTACTaGTCATCCTCCCCACACTCCCTGCTGAGGCCTCGG +
Preference number: 3 (lower is better)
Translates to: LREMRRKFSALY*SSSPHSLLRPR
Trigger: CCGAGGCCTCAGCAGGGAGTGTGGGGAGGATGAGCAGTACAGTGCAGAGAATTTACGTCGCATCTCACGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
3UTR-3UTR CAA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGCGGGGTTTCACCATGTaGGCCAGGATGGTCTCAATC +
Preference number: 3 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRRGFTM*ARMVSI
Trigger: GATTGAGACCATCCTGGCCAACATGGTGAAACCCCG...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCCTCCTGCTCTGTGTCTaGGTTCCAATGTGGATGCAA +
Preference number: 3 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRLLLCV*VPMWMQ
Trigger: TTGCATCCACATTGGAACCAAGACACAGAGCAGGAG...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCCAGGGTGCCCAGGAGTaGTCTGTTCTGGAGCGATGG +
Preference number: 3 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFQGAQE*SVLERW
Trigger: CCATCGCTCCAGAACAGACAACTCCTGGGCACCCTG...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR TCA 72 bp CCGGAGCTTCCTCCCTCTCTGAGACAACGGTGCCACTaGGACTGCGTGAGATGCGACGTAAATTCTCTGCAC +
Preference number: 3 (lower is better)
Translates to: PELPPSLRQRCH*DCVRCDVNSLH
Trigger: GTGCAGAGAATTTACGTCGCATCTCACGCAGTCTCAGTGGCACCGTTGTCTCAGAGAGGGAGGAAGCTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466048.6
3UTR GCA 72 bp CTATCCCTCATGGAGACACCCTGCATCCTCTGGAACTaGTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTG +
Preference number: 3 (lower is better)
Translates to: LSLMETPCILWN*SARERTSPFVL
Trigger: CAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCAGAGGATGCAGGGTGTCTCCATGAGGGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CCA 72 bp ACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTaGGAAACTCTGGCCTATAGGTCTCCTCACTGCCTC +
Preference number: 3 (lower is better)
Translates to: TAQPENGQAPLC*ETLAYRSPHCL
Trigger: GAGGCAGTGAGGAGACCTATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATGCAGAGGGTTCAATGTaGTCTACTTCAACCGAAGTC +
Preference number: 3 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHAEGSM*STSTEV
Trigger: GACTTCGGTTGAAGTAGACAACATTGAACCCTCTGC...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCTTGCTGCAACTGCTGTaGTCACACCTAGAGCCTTGC +
Preference number: 3 (lower is better)
Translates to: WNCSARERTSPFVLGNSGLLQLL*SHLEPC
Trigger: GCAAGGCTCTAGGTGTGACAACAGCAGTTGCAGCAA...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR TCA 72 bp AGTCAGGAATCTGGTCCCAATATGCTGGTTGGTCTCTaGCCAGGGTGCCCAGGAGTTGTCTGTTCTGGAGCG +
Preference number: 3 (lower is better)
Translates to: SQESGPNMLVGL*PGCPGVVCSGA
Trigger: CGCTCCAGAACAGACAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR GCA 72 bp AGCTTGCTGCAACTGCTGTTGTCACACCTAGAGCCTTaGAGCTTACCCTCTGGGGCATCCAATGGCTCCCAA +
Preference number: 3 (lower is better)
Translates to: SLLQLLLSHLEP*SLPSGASNGSQ
Trigger: TTGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGACAACAGCAGTTGCAGCAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR GCA 72 bp TTGCACCCTGGAGTAGTCAGGAATCTGGTCCCAATATaGTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTG +
Preference number: 3 (lower is better)
Translates to: LHPGVVRNLVPI*WLVSDQGAQEL
Trigger: CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCTGACTACTCCAGGGTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR CAA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGCGGGGTTTCACCATGTaGGCCAGGATGGTCTCAATC +
Preference number: 3 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKRGFTM*ARMVSI
Trigger: GATTGAGACCATCCTGGCCAACATGGTGAAACCCCG...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCCGGGGTTTCACCATGTaGGCCAGGATGGTCTCAATC +
Preference number: 3 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFRGFTM*ARMVSI
Trigger: GATTGAGACCATCCTGGCCAACATGGTGAAACCCCG...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR CAA 90 bp AGATGCGACGTAAATTCTCTGCACTGTACTGCTCATCCTCCCCACACTCCCTGCTCCAGAACAGCCAGCTaGAGAAGCCTGAAGACTGGC +
Preference number: 3 (lower is better)
Translates to: RCDVNSLHCTAHPPHTPCSRTAS*RSLKTG
Trigger: GCCAGTCTTCAGGCTTCTCAAGCTGGCTGTTCTGGA...GCAGGGAGTGTGGGGAGGATGAGCAGTACAGTGCAGAGAATTTACGTCGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
3UTR-3UTR CAA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCTTGGGGAAGGTAGAGTaGGGGACCGAGGAGAAACAC +
Preference number: 3 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFLGKVE*GTEEKH
Trigger: GTGTTTCTCCTCGGTCCCCAACTCTACCTTCCCCAA...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
3UTR GCA 72 bp CACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTaGCAACCTGGGCTGTCCTCCGCTAGAAGTTTCACC +
Preference number: 3 (lower is better)
Translates to: HLGQLLLVYVWL*QPGLSSARSFT
Trigger: GGTGAAACTTCTAGCGGAGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGCAGAGGGTTCAATGTaGTCTACTTCAACCGAAGTC +
Preference number: 3 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRAEGSM*STSTEV
Trigger: GACTTCGGTTGAAGTAGACAACATTGAACCCTCTGC...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTATCTTGTGGAGGGAGCTaGCTGCAACTGCTGTTGTCA +
Preference number: 3 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVSCGGS*LQLLLS
Trigger: TGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAGA...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR GCA 72 bp TCCTTGAAACCTGTACTATCCCTCATGGAGACACCCTaGATCCTCTGGAACTGCTCAGCCAGAGAACGGACA +
Preference number: 3 (lower is better)
Translates to: SLKPVLSLMETP*ILWNCSARERT
Trigger: TGTCCGTTCTCTGGCTGAGCAGTTCCAGAGGATGCAGGGTGTCTCCATGAGGGATAGTACAGGTTTCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR GCA 72 bp CCACTGTTCTCCTGTGTCCAGAGTGGGAGGCATAACTaGTTTGCCTCCAGTCATCATCTGGGGGCATATCTA +
Preference number: 3 (lower is better)
Translates to: PLFSCVQSGRHN*FASSHHLGAYL
Trigger: TAGATATGCCCCCAGATGATGACTGGAGGCAAAGCAGTTATGCCTCCCACTCTGGACACAGGAGAACAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR CCA 72 bp ATCTCTCACTTGGGACAGCTTCTCTTGGTATATGTCTaGCTCTGCCAACCTGGGCTGTCCTCCGCTAGAAGT +
Preference number: 3 (lower is better)
Translates to: ISHLGQLLLVYV*LCQPGLSSARS
Trigger: ACTTCTAGCGGAGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGTGAGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CCA 72 bp GAGGAACCTGAAGGCCCTTGCTTCTTTCTGGTAGTGTaGCAGTGTAGGTTAGTTGAGGATTGCACCCTGGAG +
Preference number: 3 (lower is better)
Translates to: EEPEGPCFFLVV*QCRLVEDCTLE
Trigger: CTCCAGGGTGCAATCCTCAACTAACCTACACTGCCACACTACCAGAAAGAAGCAAGGGCCTTCAGGTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR CAA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGCGGGGTTTCACCATGTaGGCCAGGATGGTCTCAATC +
Preference number: 3 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWRGFTM*ARMVSI
Trigger: GATTGAGACCATCCTGGCCAACATGGTGAAACCCCG...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGGTCACACCTAGAGCCTaGCAGCTTACCCTCTGGGGC +
Preference number: 3 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKVTPRA*QLTLWG
Trigger: GCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGAC...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTAACGGACAAGCCCCTTaGTGCTGGGAAACTCTGGCC +
Preference number: 3 (lower is better)
Translates to: SWPRCPMLKLRITEPCDINGQAP*CWETLA
Trigger: GGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTT...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTACCCTCCAGAGAGGATaGTTGCTTTGCCCATGGCCA +
Preference number: 3 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFTLQRG*LLCPWP
Trigger: TGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGT...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACTTGGGACAGCTTCTCTaGGTATATGTCTGGCTCTGC +
Preference number: 3 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNLGQLL*VYVWLC
Trigger: GCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAA...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp AGATGCGACGTAAATTCTCTGCACTGTACTGCTCATCCTCCCCACACTCCCTGCCTCCTGCTCTGTGTCTaGGTTCCAATGTGGATGCAA +
Preference number: 3 (lower is better)
Translates to: RCDVNSLHCTAHPPHTPCLLLCV*VPMWMQ
Trigger: TTGCATCCACATTGGAACCAAGACACAGAGCAGGAG...GCAGGGAGTGTGGGGAGGATGAGCAGTACAGTGCAGAGAATTTACGTCGCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
3UTR-3UTR CAA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTCAGGGTGCCCAGGAGTaGTCTGTTCTGGAGCGATGG +
Preference number: 3 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVQGAQE*SVLERW
Trigger: CCATCGCTCCAGAACAGACAACTCCTGGGCACCCTG...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR-3UTR CAA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACGCAGAGGGTTCAATGTaGTCTACTTCAACCGAAGTC +
Preference number: 3 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNAEGSM*STSTEV
Trigger: GACTTCGGTTGAAGTAGACAACATTGAACCCTCTGC...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTTTGCTGCAACTGCTGTaGTCACACCTAGAGCCTTGC +
Preference number: 3 (lower is better)
Translates to: VSTAAQILRPNISHLGQLLLQLL*SHLEPC
Trigger: GCAAGGCTCTAGGTGTGACAACAGCAGTTGCAGCAA...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGTCTTGTGGAGGGAGCTaGCTGCAACTGCTGTTGTCA +
Preference number: 3 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWSCGGS*LQLLLS
Trigger: TGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAGA...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTAACGGACAAGCCCCTTaGTGCTGGGAAACTCTGGCC +
Preference number: 3 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCNGQAP*CWETLA
Trigger: GGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCAGAGAGGATTGTTGCTTaGCCCATGGCCAGTGGCCTT +
Preference number: 3 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPERIVA*PMASGL
Trigger: AAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTC...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTACCTAACATCTCTCACTaGGGACAGCTTCTCTTGGTA +
Preference number: 3 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVPNISH*GQLLLV
Trigger: TACCAAGAGAAGCTGTCCCAAGTGAGAGATGTTAGG...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGGACAGGAACTGTGGTaGGGGAAGGTAGAGTTGGGG +
Preference number: 3 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCGQELW*GKVELG
Trigger: CCCCAACTCTACCTTCCCCAACCACAGTTCCTGTCC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCCCAATATGCTGGTaGGTCTCTGACCAGGGTGCC +
Preference number: 3 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVVPICW*VSDQGA
Trigger: GGCACCCTGGTCAGAGACCAACCAGCATATTGGGAC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR TCA 72 bp AGAGTAGAAGTTGGGAGTATAGTAGGGAACAGAGGATaGGGGCTCAGGTGGAGGTGGGGACATAAAGCATCC +
Preference number: 3 (lower is better)
Translates to: RVEVGSIVGNRG*GLRWRWGHKAS
Trigger: GGATGCTTTATGTCCCCACCTCCACCTGAGCCCTCATCCTCTGTTCCCTACTATACTCCCAACTTCTACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR TCA 72 bp AGCCTGAAGACTGGCCTGATACAGAGACTCCAATTCTaGGGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGG +
Preference number: 3 (lower is better)
Translates to: SLKTGLIQRLQF*GLLLCVLVPMW
Trigger: CCACATTGGAACCAAGACACAGAGCAGGAGACCTCAGAATTGGAGTCTCTGTATCAGGCCAGTCTTCAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR GCA 72 bp CACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTaGTTCTTTCTGGTAGTGTGGCAGTGTAGGTTAGTT +
Preference number: 3 (lower is better)
Translates to: HSRTECEEPEGP*FFLVVWQCRLV
Trigger: AACTAACCTACACTGCCACACTACCAGAAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR CCA 72 bp CCTAGAGCCTTGCAGCTTACCCTCTGGGGCATCCAATaGCTCCCAACTATGATGAGAATTCTTCTCAGTCCA +
Preference number: 3 (lower is better)
Translates to: PRALQLTLWGIQ*LPTMMRILLSP
Trigger: TGGACTGAGAAGAATTCTCATCATAGTTGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAAGGCTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CCA 72 bp GCTGTTGTCACACCTAGAGCCTTGCAGCTTACCCTCTaGGGCATCCAATGGCTCCCAACTATGATGAGAATT +
Preference number: 3 (lower is better)
Translates to: AVVTPRALQLTL*GIQWLPTMMRI
Trigger: AATTCTCATCATAGTTGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGACAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CCA 72 bp GAACAGCTGTTCTTGAGCAATGCCTCTTCCTTCTTGTaGAGGGAGCTTGCTGCAACTGCTGTTGTCACACCT +
Preference number: 3 (lower is better)
Translates to: EQLFLSNASSFL*RELAATAVVTP
Trigger: AGGTGTGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGCATTGCTCAAGAACAGCTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CCA 72 bp GCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTaGGCTGAGCTGATGAATTTGAAGGACTACAGCCTA +
Preference number: 3 (lower is better)
Translates to: ALWGGRFYTGEG*AELMNLKDYSL
Trigger: TAGGCTGTAGTCCTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CCA 72 bp ACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTaGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACA +
Preference number: 3 (lower is better)
Translates to: TRMGIMRGGLHS*PRCPMLKLRIT
Trigger: TGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CCA 72 bp GAAGTTTCACCCCTGTCACACATAGCCAGAAACTGCTaGACACTCCTTGAAGTTCCTGGGAGTCTATTGGGC +
Preference number: 3 (lower is better)
Translates to: EVSPLSHIARNC*TLLEVPGSLLG
Trigger: GCCCAATAGACTCCCAGGAACTTCAAGGAGTGTCCAGCAGTTTCTGGCTATGTGTGACAGGGGTGAAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTCGGGGTTTCACCATGTaGGCCAGGATGGTCTCAATC +
Preference number: 3 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVRGFTM*ARMVSI
Trigger: GATTGAGACCATCCTGGCCAACATGGTGAAACCCCG...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR-3UTR CAA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTAGGGTGAATGTTATGTaGGCAGCTCCGCATTCTAGG +
Preference number: 3 (lower is better)
Translates to: VSTAAQILRPNISHLGQLRVNVM*AAPHSR
Trigger: CCTAGAATGCGGAGCTGCCAACATAACATTCACCCT...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTCCAGAACAGCCAGCTaGAGAAGCCTGAAGACTGGC +
Preference number: 3 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVSRTAS*RSLKTG
Trigger: GCCAGTCTTCAGGCTTCTCAAGCTGGCTGTTCTGGA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTGTGTACTTGGCCCCTaGGGAAGTTTCACCCCTGTC +
Preference number: 3 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVCVLGP*GSFTPV
Trigger: GACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR GCA 72 bp TGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACTaGTGGACACTCCTTGAAGTTCCTGGGAGTCTATTG +
Preference number: 3 (lower is better)
Translates to: WEVSPLSHIARN*WTLLEVPGSLL
Trigger: CAATAGACTCCCAGGAACTTCAAGGAGTGTCCAGCAGTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
3UTR GCA 72 bp TGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACTaGTGGACACTCCTTGAAGTTCCTGAGAAGTACGCA +
Preference number: 3 (lower is better)
Translates to: WEVSPLSHIARN*WTLLEVPEKYA
Trigger: TGCGTACTTCTCAGGAACTTCAAGGAGTGTCCAGCAGTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422491.7
3UTR CCA 72 bp GAAGTTTCACCCCTGTCACACATAGCCAGAAACTGCTaGACACTCCTTGAAGTTCCTGAGAAGTACGCACTG +
Preference number: 3 (lower is better)
Translates to: EVSPLSHIARNC*TLLEVPEKYAL
Trigger: CAGTGCGTACTTCTCAGGAACTTCAAGGAGTGTCCAGCAGTTTCTGGCTATGTGTGACAGGGGTGAAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422491.7
3UTR-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGGAGGCATAACTGCTTaGCCTCCAGTCATCATCTGG +
Preference number: 3 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCGGITA*PPVIIW
Trigger: CCAGATGATGACTGGAGGCAAAGCAGTTATGCCTCC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR TCA 72 bp GACTTCATTCCTGGCCTAGGTGCCCCATGCTTAAGCTaGGAATCACAGAACCTTGTGATATTCACCCAGGAA +
Preference number: 3 (lower is better)
Translates to: DFIPGLGAPCLS*ESQNLVIFTQE
Trigger: TTCCTGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGAATGAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR TCA 72 bp GTAGCTCCAGGAAAGGAAAGGAATAACCTTTACCATTaGCTGTGCTGCAGGACTCTAGCCCTGATCTGCTCT +
Preference number: 3 (lower is better)
Translates to: VAPGKERNNLYH*LCCRTLALICS
Trigger: AGAGCAGATCAGGGCTAGAGTCCTGCAGCACAGTCAATGGTAAAGGTTATTCCTTTCCTTTCCTGGAGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR CCA 72 bp TCAGTCCACCCTGGTGCTTTAGGTAAACCTTGCCTGTaGAATGCAGAGGGTTCAATGTTGTCTACTTCAACC +
Preference number: 3 (lower is better)
Translates to: SVHPGALGKPCL*NAEGSMLSTST
Trigger: GGTTGAAGTAGACAACATTGAACCCTCTGCATTCCACAGGCAAGGTTTACCTAAAGCACCAGGGTGGACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CCA 72 bp AAGAGAAGAATGTTCAGTGGACTCTTCCCAGGAAAGTaGTCTATCCCCACCCTCCAGAGAGGATTGTTGCTT +
Preference number: 3 (lower is better)
Translates to: KRRMFSGLFPGK*SIPTLQRGLLL
Trigger: AAGCAACAATCCTCTCTGGAGGGTGGGGATAGACCACTTTCCTGGGAAGAGTCCACTGAACATTCTTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATCTTGTGGAGGGAGCTaGCTGCAACTGCTGTTGTCA +
Preference number: 3 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPSCGGS*LQLLLS
Trigger: TGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAGA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAAATGCCTCTTCCTTCTaGTGGAGGGAGCTTGCTGCA +
Preference number: 3 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPNASSF*WRELAA
Trigger: TGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGCATT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGGCTGAGCTGATGAATTaGAAGGACTACAGCCTAGGC +
Preference number: 3 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKAELMN*KDYSLG
Trigger: GCCTAGGCTGTAGTCCTTCAAATTCATCAGCTCAGC...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTTGGCCTTGGAGGCATaGGTTAGTTTTCTGCACAGG +
Preference number: 3 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCLALEA*VSFLHR
Trigger: CCTGTGCAGAAAACTAACCAATGCCTCCAAGGCCAA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTTTTGAGGCTTTGGCCTaGGAGGCATTGGTTAGTTTT +
Preference number: 3 (lower is better)
Translates to: VSTAAQILRPNISHLGQLFEALA*EALVSF
Trigger: AAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAAA...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGTCACACCTAGAGCCTaGCAGCTTACCCTCTGGGGC +
Preference number: 3 (lower is better)
Translates to: WKLEFQISPPKESHLFRGVTPRA*QLTLWG
Trigger: GCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGAC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTTTTGAGGCTTTGGCCTaGGAGGCATTGGTTAGTTTT +
Preference number: 3 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISFEALA*EALVSF
Trigger: AAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAAA...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTTGGCCTTGGAGGCATaGGTTAGTTTTCTGCACAGG +
Preference number: 3 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGLALEA*VSFLHR
Trigger: CCTGTGCAGAAAACTAACCAATGCCTCCAAGGCCAA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTTGCTGCAACTGCTGTaGTCACACCTAGAGCCTTGC +
Preference number: 3 (lower is better)
Translates to: WKLEFQISPPKESHLFRGLLQLL*SHLEPC
Trigger: GCAAGGCTCTAGGTGTGACAACAGCAGTTGCAGCAA...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR-3UTR CAA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGCAGAGGGTTCAATGTaGTCTACTTCAACCGAAGTC +
Preference number: 3 (lower is better)
Translates to: WKLEFQISPPKESHLFRGAEGSM*STSTEV
Trigger: GACTTCGGTTGAAGTAGACAACATTGAACCCTCTGC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGTGAGAGCCTGGCCGTaGTGGGCCCCAGCGCTTGTA +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRVRAWP*WAPALV
Trigger: TACAAGCGCTGGGGCCCAGCACGGCCAGGCTCTCAC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCAGAGGCAGGTCCTGGGTaGAAACTGGGGTACCCTGGG +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPEAGPG*KLGYPG
Trigger: CCCAGGGTACCCCAGTTTCCACCCAGGACCTGCCTC...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR TCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCATGCTGCTCTAAAAGGTaGGAGCCTGGCCGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPCCSKR*EPGRAG
Trigger: CCCAGCACGGCCAGGCTCTCACCTTTTAGAGCAGCA...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTGTTGGGAGGCAGGCTaGGGGCTGCGACGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPCWEAG*GLRRLL
Trigger: CAGCAGCCGTCGCAGCCCTCAGCCTGCCTCCCAACA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCAAATCTCCTGACCTCGTaGTCCACCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPNLLTS*STRLSL
Trigger: GAGGCTGAGGCGGGTGGATCACGAGGTCAGGAGATT...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCAAGACAACGGTGCCACTaGGACTGCGTGAGATGCGAC +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPRQRCH*DCVRCD
Trigger: GTCGCATCTCACGCAGTCTCAGTGGCACCGTTGTCT...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR TCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCAGCACAACCATGGCAGTaGTGCAGGGTACCAACGCTG +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPAQPWQ*CRVPTL
Trigger: CAGCGTTGGTACCCTGCATCACTGCCATGGTTGTGC...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCAGGGCACAGGGAATGCTaGCAGGCCATAATACCTGGG +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPGHREC*QAIIPG
Trigger: CCCAGGTATTATGGCCTGTCAGCATTCCCTGTGCCC...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCGTGAGAGCCTGGCCGTaGTGGGCCCCAGCGCTTGTA +
Preference number: 4 (lower is better)
Translates to: WNCSARERTSPFVLGNSGVRAWP*WAPALV
Trigger: TACAAGCGCTGGGGCCCAGCACGGCCAGGCTCTCAC...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGTGAGAGCCTGGCCGTaGTGGGCCCCAGCGCTTGTA +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRVRAWP*WAPALV
Trigger: TACAAGCGCTGGGGCCCAGCACGGCCAGGCTCTCAC...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTGGTATCCCGAGGCCTaGGGCTCATCGCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRWYPEA*GSSPFL
Trigger: GAGGAAAGGCGATGAGCCCCAGGCCTCGGGATACCA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGAGAGCCTGGCCGTGCTaGGCCCCAGCGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPRAWPC*APALVL
Trigger: CAGTACAAGCGCTGGGGCCCAGCACGGCCAGGCTCT...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCATCAAGGCAGATCTACTaGGGGAGCTGTGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPSRQIY*GSCAVG
Trigger: CCCCACAGCACAGCTCCCCCAGTAGATCTGCCTTGA...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTGGGCTCCCCTGCCATaGTGGGCATCAGGACATCTG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRWAPLP*WASGHL
Trigger: CAGATGTCCTGATGCCCACCATGGCAGGGGAGCCCA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR TCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATCTCCTGACCTCGTaGTCCACCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLNLLTS*STRLSL
Trigger: GAGGCTGAGGCGGGTGGATCACGAGGTCAGGAGATT...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCTCCTCCTCTGCCCCTaGAGTGAGAGCCTACATTGG +
Preference number: 4 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHLLLCP*SESLHW
Trigger: CCAATGTAGGCTCTCACTGCAGGGGCAGAGGAGGAG...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCACTAGGGCTCTGCTGTaGGTGCTACAGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRTRALL*VLQLAP
Trigger: TGGTGCCAGCTGTAGCACGCACAGCAGAGCCCTAGT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGAGGCAGGCTGAGGGCTaGGACGGCTGCTGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRRQAEG*DGCCGD
Trigger: ATCACCACAGCAGCCGTCGCAGCCCTCAGCCTGCCT...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS-3UTR GCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCATCACACCTAGAGCCTTaGAGCTTACCCTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPSHLEP*SLPSGA
Trigger: TGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGA...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCAGTATATGTCTGGCTCTaGCAACCTGGGCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPVYVWL*QPGLSS
Trigger: GGAGGACAGCCCAGGTTGGCAGAGCCAGACATATAC...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGTTTGGCTAAGTGGGTaGCAGGCGGTATCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRVWLSG*QAVSCC
Trigger: GCAGCAGGATACCGCCTGGCACCCACTTAGCCAAAC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGATCCCCCATGGTGCTaGCATTCTGCAGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRDPPWC*HSAAAH
Trigger: GTGAGCTGCTGCAGAATGCCAGCACCATGGGGGATC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATTCCGCAGATCCCCCATaGTGCTGGCATTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHSADPP*CWHSAA
Trigger: TGCTGCAGAATGCCAGCACCATGGGGGATCTGCGGA...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCACTCTCCACAGTTGCTTaGACAGTTCCGCAGATCCCC +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPLSTVA*TVPQIP
Trigger: GGGGATCTGCGGAACTGTCCAAGCAACTGTGGAGAG...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTGGGGAGGCAGGTCCTaGGTGGAAACTGGGGTACCC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPWGGRS*VETGVP
Trigger: GGGTACCCCAGTTTCCACCCAGGACCTGCCTCCCCA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGTTTCTCCTTCACTGTaGTATCCCGAGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRVSPSL*YPEAWG
Trigger: GCCCCAGGCCTCGGGATACCACAGTGAAGGAGAAAC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCACTCTTCCCAGGAAAGTaGTCTATCCCCACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPLFPGK*SIPTLQ
Trigger: CTGGAGGGTGGGGATAGACCACTTTCCTGGGAAGAG...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCAGGAGGACTTCATTCCTaGCCTAGGTGCCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPGGLHS*PRCPML
Trigger: AAGCATGGGGCACCTAGGCCAGGAATGAAGTCCTCC...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATGCCTGTTTGGCTAAGTaGGTGCCAGGCGGTATCCTG +
Preference number: 4 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHACLAK*VPGGIL
Trigger: CAGGATACCGCCTGGCACCCACTTAGCCAAACAGGC...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGCATGTCCTGCTGTATaGCTGGAACTCAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRACPAV*LELSLG
Trigger: CCCCAAGCTGAGTTCCAGTCATACAGCAGGACATGC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTGCTGCTCTAAAAGGTaGGAGCCTGGCCGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPCCSKR*EPGRAG
Trigger: CCCAGCACGGCCAGGCTCTCACCTTTTAGAGCAGCA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCATGCGACTTTGGGATATaGCGCCAGGAAGGAACCAAC +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPCDFGI*RQEGTN
Trigger: GTTGGTTCCTTCCTGGCGTCATATCCCAAAGTCGCA...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGGGTGGGTACACAGGATaGACAATGGGAGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLGGYTG*TMGGWE
Trigger: CTCCCACCCTCCCATTGTTCATCCTGTGTACCCACC...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCATCAGCCTGTTGGTGCTaGTGGATGGTTTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPSACWC*WMVWRH
Trigger: ATGCCTCCAAACCATCCAGCAGCACCAACAGGCTGA...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGCTGGTCTCCTCCTCTaGCCCTGCAGTGAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPAGLLL*PCSESL
Trigger: TAGGCTCTCACTGCAGGGGCAGAGGAGGAGACCAGC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCGCTGGTCTCCTCCTCTaGCCCTGCAGTGAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: WNCSARERTSPFVLGNSGAGLLL*PCSESL
Trigger: TAGGCTCTCACTGCAGGGGCAGAGGAGGAGACCAGC...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTGTGAGAGCCTGGCCGTaGTGGGCCCCAGCGCTTGTA +
Preference number: 4 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPVRAWP*WAPALV
Trigger: TACAAGCGCTGGGGCCCAGCACGGCCAGGCTCTCAC...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGCCAGCCACCCATGGATaGTGTGGAGTCTACCTCCAG +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLPATHG*CGVYLQ
Trigger: CTGGAGGTAGACTCCACAGCATCCATGGGTGGCTGG...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCACTGACTCTGCCTCTTaGAGGGACCTCTCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRTDSAS*RDLSKP
Trigger: CGGCTTTGAGAGGTCCCTGCAAGAGGCAGAGTCAGT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGGGCTCTGCTGTGCGTaGTACAGCTGGCACCATGCA +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPGLCCA*YSWHHA
Trigger: TGCATGGTGCCAGCTGTAGCACGCACAGCAGAGCCC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTCACACCTAGAGCCTTaGAGCTTACCCTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRSHLEP*SLPSGA
Trigger: TGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGCAGGCGGTATCCTGCTaGCCCCATCCAGAACAGCCA +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRQAVSC*PHPEQP
Trigger: TGGCTGTTCTGGATGGGGGCAGCAGGATACCGCCTG...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTGCCAGGCGGTATCCTaGTGCCCCCATCCAGAACAG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPCQAVS*CPHPEQ
Trigger: CTGTTCTGGATGGGGGCAGCAGGATACCGCCTGGCA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGAGCTTCCTCCCTCTCTGAGACAACGGTGCCACTGAGACTGCGTGAGATGCGATCTATTGGGCTCCCCTaGCATGGTGGGCATCAGGAC +
Preference number: 4 (lower is better)
Translates to: GASSLSETTVPLRLREMRSIGLP*HGGHQD
Trigger: GTCCTGATGCCCACCATGGCAGGGGAGCCCAATAGA...TCGCATCTCACGCAGTCTCAGTGGCACCGTTGTCTCAGAGAGGGAGGAAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGTCCTGGGTGGAAACTaGGGTACCCTGGGGATCTGC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPVLGGN*GTLGIC
Trigger: GCAGATCCCCAGGGTACCCCAGTTTCCACCCAGGAC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGGAGGCAGGTCCTGGGTaGAAACTGGGGTACCCTGGG +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELEAGPG*KLGYPG
Trigger: CCCAGGGTACCCCAGTTTCCACCCAGGACCTGCCTC...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
CDS-3UTR CCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGTGGGGAGGCAGGTCCTaGGTGGAAACTGGGGTACCC +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELWGGRS*VETGVP
Trigger: GGGTACCCCAGTTTCCACCCAGGACCTGCCTCCCCA...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
CDS-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGTGGGGAGGCAGGTCCTaGGTGGAAACTGGGGTACCC +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKWGGRS*VETGVP
Trigger: GGGTACCCCAGTTTCCACCCAGGACCTGCCTCCCCA...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
CDS-3UTR CCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGTGGTATCCCGAGGCCTaGGGCTCATCGCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRWYPEA*GSSPFL
Trigger: GAGGAAAGGCGATGAGCCCCAGGCCTCGGGATACCA...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGAGAGCCTGGCCGTGCTaGGCCCCAGCGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKRAWPC*APALVL
Trigger: CAGTACAAGCGCTGGGGCCCAGCACGGCCAGGCTCT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCAGGCTGTTCACTTGTTaGCTGAGAGAGAGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRRLFTC*LRESPR
Trigger: GCGGGGACTCTCTCTCAGCCAACAAGTGAACAGCCT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGCACCCCTCTCAGAGGTaGCTATTCCAGGCATCACCG +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLHPSQR*LFQASP
Trigger: CGGTGATGCCTGGAATAGCCACCTCTGAGAGGGGTG...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGGGCATCAGGACATCTaGGGACAGGAACTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRGHQDI*GQELWL
Trigger: CAACCACAGTTCCTGTCCCCAGATGTCCTGATGCCC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCAGTGTACTTGGCCCCTTaGGAAGTTTCACCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPVYLAP*EVSPLS
Trigger: TGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACAC...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTGTTCGAGTGTCACTTaGGATGGAGGGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPCSSVT*DGGLPP
Trigger: GGGAGGGAGCCCTCCATCTCAAGTGACACTCGAACA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGATCCCTGTAGACATTTaGGCTCTCAGGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLIPVDI*ALRQGC
Trigger: GCAGCCCTGCCTGAGAGCTCAAATGTCTACAGGGAT...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATTGCGACTTTGGGATATaGCGCCAGGAAGGAACCAAC +
Preference number: 4 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHCDFGI*RQEGTN
Trigger: GTTGGTTCCTTCCTGGCGTCATATCCCAAAGTCGCA...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGCGACGGCTGCTGTGGTaGTTGCTGCTGCTGCATGCG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKRRLLW*LLLLHA
Trigger: CGCATGCAGCAGCAGCAATCACCACAGCAGCCGTCG...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTTGTTGGGAGGCAGGCTaGGGGCTGCGACGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFCWEAG*GLRRLL
Trigger: CAGCAGCCGTCGCAGCCCTCAGCCTGCCTCCCAACA...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGGTGGGTACACAGGATaGACAATGGGAGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPGGYTG*TMGGWE
Trigger: CTCCCACCCTCCCATTGTTCATCCTGTGTACCCACC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGATGGTCTCAATCTCCTaGCCTCGTGATCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLMVSIS*PRDPPA
Trigger: GGCGGGTGGATCACGAGGTCAGGAGATTGAGACCAT...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGCAGATCCCCCATGGTaGTGGCATTCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPADPPW*WHSAAA
Trigger: AGCTGCTGCAGAATGCCAGCACCATGGGGGATCTGC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATGACCAGAGCTCCTCTTaGGCTCTATCAGTGACCCTT +
Preference number: 4 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHDQSSS*ALSVTL
Trigger: AAGGGTCACTGATAGAGCGCAAGAGGAGCTCTGGTC...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
CDS-3UTR GCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGCCAGCCACCCATGGATaGTGTGGAGTCTACCTCCAG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPPATHG*CGVYLQ
Trigger: CTGGAGGTAGACTCCACAGCATCCATGGGTGGCTGG...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGGACAAGCCCCTTTGTaGTGGGAAACTCTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRGQAPL*WETLAY
Trigger: ATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCAGGCGGTATCCTGCTaGCCCCATCCAGAACAGCCA +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAEQAVSC*PHPEQP
Trigger: TGGCTGTTCTGGATGGGGGCAGCAGGATACCGCCTG...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGTTTGGCTAAGTGGGTaGCAGGCGGTATCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRVWLSG*QAVSCC
Trigger: GCAGCAGGATACCGCCTGGCACCCACTTAGCCAAAC...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGGTTTGGCTAAGTGGGTaGCAGGCGGTATCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLVWLSG*QAVSCC
Trigger: GCAGCAGGATACCGCCTGGCACCCACTTAGCCAAAC...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp GGAGCTTCCTCCCTCTCTGAGACAACGGTGCCACTGAGACTGCGTGAGATGCGAGAGCTGGAACAACGGTaGCCGGTTTCCAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: GASSLSETTVPLRLREMRELEQR*PVSKGF
Trigger: GAAGCCTTTGGAAACCGGGCACCGTTGTTCCAGCTC...TCGCATCTCACGCAGTCTCAGTGGCACCGTTGTCTCAGAGAGGGAGGAAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR GCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCAACTCTAGCCCTGATCTaGTCTCTTCTGGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPTLALI*SLLGAS
Trigger: AGATGCTCCCAGAAGAGAGCAGATCAGGGCTAGAGT...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGATCCCCCATGGTGCTaGCATTCTGCAGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPDPPWC*HSAAAH
Trigger: GTGAGCTGCTGCAGAATGCCAGCACCATGGGGGATC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGGTCCTGGGTGGAAACTaGGGTACCCTGGGGATCTGC +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKVLGGN*GTLGIC
Trigger: GCAGATCCCCAGGGTACCCCAGTTTCCACCCAGGAC...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGGAGGCAGGTCCTGGGTaGAAACTGGGGTACCCTGGG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKEAGPG*KLGYPG
Trigger: CCCAGGGTACCCCAGTTTCCACCCAGGACCTGCCTC...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGGACTGGAACTCAGCTTaGGGAGGCAGGTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKDWNSA*GGRSWV
Trigger: CACCCAGGACCTGCCTCCCCAAGCTGAGTTCCAGTC...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGTTTCTCCTTCACTGTaGTATCCCGAGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPVSPSL*YPEAWG
Trigger: GCCCCAGGCCTCGGGATACCACAGTGAAGGAGAAAC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTTGTCCAGCCACCCATaGATGCTGTGGAGTCTACCT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRLSSHP*MLWSLP
Trigger: AGGTAGACTCCACAGCATCCATGGGTGGCTGGACAA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTGTGCGTGCTACAGCTaGCACCATGCAGGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPCACYS*HHAGQV
Trigger: GACTTGCCCTGCATGGTGCCAGCTGTAGCACGCACA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGCACCCCTCTCAGAGGTaGCTATTCCAGGCATCACCG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPHPSQR*LFQASP
Trigger: CGGTGATGCCTGGAATAGCCACCTCTGAGAGGGGTG...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCACACCCTGCATCCTCTaGAACTGCTCAGCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRTPCIL*NCSARE
Trigger: TTCTCTGGCTGAGCAGTTCCAGAGGATGCAGGGTGT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCTCTTGGTATATGTCTaGCTCTGCCAACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHLLVYV*LCQPGL
Trigger: CAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAG...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGCCTGTTTGGCTAAGTaGGTGCCAGGCGGTATCCTG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPACLAK*VPGGIL
Trigger: CAGGATACCGCCTGGCACCCACTTAGCCAAACAGGC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACGCTCCCCTGCCATGGTaGGCATCAGGACATCTGGGG +
Preference number: 4 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNAPLPW*ASGHLG
Trigger: CCCCAGATGTCCTGATGCCCACCATGGCAGGGGAGC...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGGCTCCCCTGCCATGGTaGGCATCAGGACATCTGGGG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKAPLPW*ASGHLG
Trigger: CCCCAGATGTCCTGATGCCCACCATGGCAGGGGAGC...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCACCTCCAGTCATCATCTaGGGGCATATCTACTCTTCG +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPPPVII*GHIYSS
Trigger: CGAAGAGTAGATATGCCCCCAGATGATGACTGGAGG...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGAGCCTTCCGAGTAGTTaGGACTACAGGCACGCACCG +
Preference number: 4 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLSLPSS*DYRHAP
Trigger: CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCT...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGAGCCTTCCGAGTAGTTaGGACTACAGGCACGCACCG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPSLPSS*DYRHAP
Trigger: CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCT...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGGGCTCAGGTGGAGGTaGGGACATAAAGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPGLRWR*GHKASR
Trigger: CCTGGATGCTTTATGTCCCCACCTCCACCTGAGCCC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGGTCATCCGTCACTCTaGAAAACAGATCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRGHPSL*KTDHPA
Trigger: AGCTGGGTGATCTGTTTTTCAGAGTGACGGATGACC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGCATGTCCTGCTGTATaGCTGGAACTCAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPACPAV*LELSLG
Trigger: CCCCAAGCTGAGTTCCAGTCATACAGCAGGACATGC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGCATGTCCTGCTGTATaGCTGGAACTCAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRACPAV*LELSLG
Trigger: CCCCAAGCTGAGTTCCAGTCATACAGCAGGACATGC...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
CDS-3UTR TCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGGGAGGGCTCCCTCCCTaGATCTTCACTGTCGTAGCA +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELGGLPP*IFTVVA
Trigger: TGCTACGACAGTGAAGATTCAGGGAGGGAGCCCTCC...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
CDS-3UTR TCA 90 bp GGAGCTTCCTCCCTCTCTGAGACAACGGTGCCACTGAGACTGCGTGAGATGCGACAGAAGAGAAGTGACTaGCCACAGACTCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: GASSLSETTVPLRLREMRQKRSD*PQTHGG
Trigger: CCCACCATGAGTCTGTGGTCAGTCACTTCTCTTCTG...TCGCATCTCACGCAGTCTCAGTGGCACCGTTGTCTCAGAGAGGGAGGAAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR TCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATGTGTCCCGACTGCTCTaGGACATGGAATCATTTTCC +
Preference number: 4 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHVSRLL*DMESFS
Trigger: GGAAAATGATTCCATGTCTCAGAGCAGTCGGGACAC...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCCTTGCGCTCTATCAGTaGCCCTTTCTTGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRLALYQ*PFLGCV
Trigger: CACACATCCAAGAAAGGGTCACTGATAGAGCGCAAG...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGAGCCTACATTGGTCTaGGAAGCCAGGGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPEPTLV*EARDGL
Trigger: CAGACCATCCCTGGCTTCTCAGACCAATGTAGGCTC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCAGGAAGAACTGGATTTTaGCTCACTGCTGGTACTCTC +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPGRTGF*LTAGTL
Trigger: GAGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCC...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCATCCCTGTAGACATTTaGGCTCTCAGGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: WNCSARERTSPFVLGNSGIPVDI*ALRQGC
Trigger: GCAGCCCTGCCTGAGAGCTCAAATGTCTACAGGGAT...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCAGGAACCAACCCAGCTaGTCTCTTAGCACTTGGATC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRRNQPS*SLSTWI
Trigger: GATCCAAGTGCTAAGAGATCAGCTGGGTTGGTTCCT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCATGAAGCGGCTAGGATaGGGGTTAAACCCTTTCGCT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRMKRLG*GLNPFA
Trigger: AGCGAAAGGGTTTAACCCTCATCCTAGCCGCTTCAT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCCCGTCACTCCTCCCCTaGTTCTGCAGTTCATCCAAG +
Preference number: 4 (lower is better)
Translates to: WNCSARERTSPFVLGNSGPSLLP*FCSSSK
Trigger: CTTGGATGAACTGCAGAATCAGGGGAGGAGTGACGG...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGCCGTCACTCCTCCCCTaGTTCTGCAGTTCATCCAAG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPPSLLP*FCSSSK
Trigger: CTTGGATGAACTGCAGAATCAGGGGAGGAGTGACGG...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCACGTATGGGAATCATaGGGGGAGGACTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHHVWES*GEDFIP
Trigger: AGGAATGAAGTCCTCCCCTCATGATTCCCATACGTG...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGCAGAGACTCCAATTCTaGGGTCTCCTGCTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLQRLQF*GLLLCV
Trigger: GACACAGAGCAGGAGACCTCAGAATTGGAGTCTCTG...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGACCTCAGGGGTACATaGAGACTGCTAGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPDLRGT*RLLDGG
Trigger: CCCACCATCTAGCAGTCTTCATGTACCCCTGAGGTC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTAATCTCCTGACCTCGTaGTCCACCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPNLLTS*STRLSL
Trigger: GAGGCTGAGGCGGGTGGATCACGAGGTCAGGAGATT...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp AGATGCGACGTAAATTCTCTGCACTGTACTGCTCATCCTCCCCACACTCCCTGCAATCTCCTGACCTCGTaGTCCACCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RCDVNSLHCTAHPPHTPCNLLTS*STRLSL
Trigger: GAGGCTGAGGCGGGTGGATCACGAGGTCAGGAGATT...GCAGGGAGTGTGGGGAGGATGAGCAGTACAGTGCAGAGAATTTACGTCGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR GCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGCTCCTCCTCTGCCCCTaGAGTGAGAGCCTACATTGG +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKLLLCP*SESLHW
Trigger: CCAATGTAGGCTCTCACTGCAGGGGCAGAGGAGGAG...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGCTGGTCTCCTCCTCTaGCCCTGCAGTGAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFAGLLL*PCSESL
Trigger: TAGGCTCTCACTGCAGGGGCAGAGGAGGAGACCAGC...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCTCCAGGATGCTACTaGTGTGCGACTTTGGGATAT +
Preference number: 4 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHPPGCY*CATLGY
Trigger: ATATCCCAAAGTCGCACAGCAGTAGCATCCTGGAGG...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGCCAGCCACCCATGGATaGTGTGGAGTCTACCTCCAG +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELPATHG*CGVYLQ
Trigger: CTGGAGGTAGACTCCACAGCATCCATGGGTGGCTGG...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCACTGGCCACCTCTTCCTaGAATTCATCCAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPLATSS*NSSSSL
Trigger: AAGTGAACTGGATGAATTGCAGGAAGAGGTGGCCAG...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATACAGAGAGCCAAAGCTaGAGCACAGTCTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHTESQS*STVSFL
Trigger: CAGAAAGGAGACTGTGCTGCAGCTTTGGCTCTCTGT...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGATTGCTGCTGCTGCATaGGATCCTGCAGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELIAAAA*DPAGSV
Trigger: CACGGAGCCTGCAGGATCGCATGCAGCAGCAGCAAT...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS-3UTR GCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGCTTGTGGAGGGAGCTTaGTGCAACTGCTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLLVEGA*CNCCCH
Trigger: GTGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAG...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCAGAGGATTGTTGCTTTaGCCATGGCCAGTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRRGLLL*PWPVAF
Trigger: AAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCTGCCAGGCGGTATCCTaGTGCCCCCATCCAGAACAG +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFCQAVS*CPHPEQ
Trigger: CTGTTCTGGATGGGGGCAGCAGGATACCGCCTGGCA...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGAGCTGGAACAACGGTaGCCGGTTTCCAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPELEQR*PVSKGF
Trigger: GAAGCCTTTGGAAACCGGGCACCGTTGTTCCAGCTC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCACTCTAGCCCTGATCTaGTCTCTTCTGGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRTLALI*SLLGAS
Trigger: AGATGCTCCCAGAAGAGAGCAGATCAGGGCTAGAGT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGCTTTGCTGGGGGCTATaGAGGTTGAGCTTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPLCWGL*RLSFEV
Trigger: CACCTCGAAGCTCAACCTCCATAGCCCCCAGCAAAG...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGGATCCCCCATGGTGCTaGCATTCTGCAGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAEDPPWC*HSAAAH
Trigger: GTGAGCTGCTGCAGAATGCCAGCACCATGGGGGATC...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGTGGTATCCCGAGGCCTaGGGCTCATCGCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKWYPEA*GSSPFL
Trigger: GAGGAAAGGCGATGAGCCCCAGGCCTCGGGATACCA...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGCACCCATGGATGCTGTaGAGTCTACCTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPHPWML*SLPPGC
Trigger: GCATCCTGGAGGTAGACTCCACAGCATCCATGGGTG...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGCACCCATGGATGCTGTaGAGTCTACCTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLHPWML*SLPPGC
Trigger: GCATCCTGGAGGTAGACTCCACAGCATCCATGGGTG...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCACAGGCATTATGGGGTaGCAGGTTCTATACAGGGGA +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRTGIMG*QVLYRG
Trigger: TCCCCTGTATAGAACCTGCCACCCCATAATGCCTGT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCCTGTACTATCCCTCATaGAGACACCCTGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRLYYPS*RHPASS
Trigger: AGAGGATGCAGGGTGTCTCCATGAGGGATAGTACAG...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGCTCTTCCCAGGAAAGTaGTCTATCCCCACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPLFPGK*SIPTLQ
Trigger: CTGGAGGGTGGGGATAGACCACTTTCCTGGGAAGAG...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATGAGAAGCCTGAAGACTaGCCTGATACAGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHEKPED*PDTETP
Trigger: TGGAGTCTCTGTATCAGGCCAGTCTTCAGGCTTCTC...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGGTGTACTTGGCCCCTTaGGAAGTTTCACCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLVYLAP*EVSPLS
Trigger: TGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACAC...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTCCTTCCTGTGTACTTaGCCCCTTGGGAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRSFLCT*PLGKFH
Trigger: GTGAAACTTCCCAAGGGGCCAAGTACACAGGAAGGA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGAGGAGTTGTCTGTTCTaGAGCGATGGGGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLRSCLF*SDGGGS
Trigger: AGAGCCTCCCCCATCGCTCCAGAACAGACAACTCCT...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGAGGAGTTGTCTGTTCTaGAGCGATGGGGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRRSCLF*SDGGGS
Trigger: AGAGCCTCCCCCATCGCTCCAGAACAGACAACTCCT...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGAGGAGTTGTCTGTTCTaGAGCGATGGGGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPRSCLF*SDGGGS
Trigger: AGAGCCTCCCCCATCGCTCCAGAACAGACAACTCCT...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGTCCCAATATGCTGGTTaGTCTCTGACCAGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRSQYAG*SLTRVP
Trigger: GGGCACCCTGGTCAGAGACCAACCAGCATATTGGGA...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCTCCCAATATGCTGGTTaGTCTCTGACCAGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: WNCSARERTSPFVLGNSGSQYAG*SLTRVP
Trigger: GGGCACCCTGGTCAGAGACCAACCAGCATATTGGGA...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCCCAATATGCTGGTTaGTCTCTGACCAGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPSQYAG*SLTRVP
Trigger: GGGCACCCTGGTCAGAGACCAACCAGCATATTGGGA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGGGGTGGGAGGGTGAATaGAAAAGATCACTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLGWEGE*KRSLQD
Trigger: GTCCTGGAGTGATCTTTTCCATTCACCCTCCCACCC...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGAGCCTTCCGAGTAGTTaGGACTACAGGCACGCACCG +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELSLPSS*DYRHAP
Trigger: CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCT...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGAGCCTTCCGAGTAGTTaGGACTACAGGCACGCACCG +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKSLPSS*DYRHAP
Trigger: CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCT...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGGGGCTCAGGTGGAGGTaGGGACATAAAGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAEGLRWR*GHKASR
Trigger: CCTGGATGCTTTATGTCCCCACCTCCACCTGAGCCC...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CAA 72 bp GAGCTTGCTGCAACTGCTGTTGTCACACCTAGAGCCTaGCAGCTTACCCTCTGGGGCATCCAATGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: ELAATAVVTPRA*QLTLWGIQWLP
Trigger: TGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGACAACAGCAGTTGCAGCAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTCTCCCATGCACTTGTaGGTTGTAAGCTGCCTAAAG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRSPMHL*VVSCLK
Trigger: CTTTAGGCAGCTTACAACTCACAAGTGCATGGGAGA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGCTGATAATGCCCCTTaGTGCATTTGGTCACCACAT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRADNAP*CIWSPH
Trigger: ATGTGGTGACCAAATGCATCAAGGGGCATTATCAGC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTGGAGGGCTCCCTCCCTaGATCTTCACTGTCGTAGCA +
Preference number: 4 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPGGLPP*IFTVVA
Trigger: TGCTACGACAGTGAAGATTCAGGGAGGGAGCCCTCC...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR TCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCTGTTCGAGTGTCACTTaGGATGGAGGGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFCSSVT*DGGLPP
Trigger: GGGAGGGAGCCCTCCATCTCAAGTGACACTCGAACA...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGCAGAAGAGAAGTGACTaGCCACAGACTCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPQKRSD*PQTHGG
Trigger: CCCACCATGAGTCTGTGGTCAGTCACTTCTCTTCTG...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGGAGCCTACATTGGTCTaGGAAGCCAGGGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKEPTLV*EARDGL
Trigger: CAGACCATCCCTGGCTTCTCAGACCAATGTAGGCTC...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGTGCTGCTCTAAAAGGTaGGAGCCTGGCCGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRCCSKR*EPGRAG
Trigger: CCCAGCACGGCCAGGCTCTCACCTTTTAGAGCAGCA...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTGCGACTTTGGGATATaGCGCCAGGAAGGAACCAAC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPCDFGI*RQEGTN
Trigger: GTTGGTTCCTTCCTGGCGTCATATCCCAAAGTCGCA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGCCGTCACTCCTCCCCTaGTTCTGCAGTTCATCCAAG +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKPSLLP*FCSSSK
Trigger: CTTGGATGAACTGCAGAATCAGGGGAGGAGTGACGG...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTGGAACAGCTGTTCTTaGGCAATGCCTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRWNSCS*AMPLPS
Trigger: AGAAGGAAGAGGCATTGCTCAAGAACAGCTGTTCCA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGAGGGGAAGGCTGGGCTaGGCTGATGAATTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPRGRLG*ADEFEG
Trigger: TCCTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCT...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCAGTGGCCTTTCTCTTaGCCCTGTGAGAAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAEQWPFS*PCEKGG
Trigger: GCCTCCTTTCTCACAGGGTCAAGAGAAAGGCCACTG...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACATGGTCTCAATCTCCTaGCCTCGTGATCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNMVSIS*PRDPPA
Trigger: GGCGGGTGGATCACGAGGTCAGGAGATTGAGACCAT...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGATGTCATCAGAACCATaGCCACAGGGCTACATGTCC +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLMSSEP*PQGYMS
Trigger: GGACATGTAGCCCTGTGGTCATGGTTCTGATGACAT...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTAGGGCACAGGGAATGCTaGCAGGCCATAATACCTGGG +
Preference number: 4 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVGHREC*QAIIPG
Trigger: CCCAGGTATTATGGCCTGTCAGCATTCCCTGTGCCC...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTGGGCACAGGGAATGCTaGCAGGCCATAATACCTGGG +
Preference number: 4 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPGHREC*QAIIPG
Trigger: CCCAGGTATTATGGCCTGTCAGCATTCCCTGTGCCC...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGGGGCACAGGGAATGCTaGCAGGCCATAATACCTGGG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKGHREC*QAIIPG
Trigger: CCCAGGTATTATGGCCTGTCAGCATTCCCTGTGCCC...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGCTCCTCCTCTGCCCCTaGAGTGAGAGCCTACATTGG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKLLLCP*SESLHW
Trigger: CCAATGTAGGCTCTCACTGCAGGGGCAGAGGAGGAG...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGGCTGGTCTCCTCCTCTaGCCCTGCAGTGAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRAGLLL*PCSESL
Trigger: TAGGCTCTCACTGCAGGGGCAGAGGAGGAGACCAGC...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AGATGCGACGTAAATTCTCTGCACTGTACTGCTCATCCTCCCCACACTCCCTGCCCAGCCACCCATGGATaGTGTGGAGTCTACCTCCAG +
Preference number: 4 (lower is better)
Translates to: RCDVNSLHCTAHPPHTPCPATHG*CGVYLQ
Trigger: CTGGAGGTAGACTCCACAGCATCCATGGGTGGCTGG...GCAGGGAGTGTGGGGAGGATGAGCAGTACAGTGCAGAGAATTTACGTCGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR GCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGACTAGGGCTCTGCTGTaGGTGCTACAGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKTRALL*VLQLAP
Trigger: TGGTGCCAGCTGTAGCACGCACAGCAGAGCCCTAGT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGCTTTAGGTAAACCTTaGCTGTGGAATGCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRALGKP*LWNAEG
Trigger: ACCCTCTGCATTCCACAGGCAAGGTTTACCTAAAGC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGTCACACCTAGAGCCTTaGAGCTTACCCTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELSHLEP*SLPSGA
Trigger: TGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGA...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGCTGTTCTTGAGCAATaGCTCTTCCTTCTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRAVLEQ*LFLLVE
Trigger: CTCCACAAGAAGGAAGAGGCATTGCTCAAGAACAGC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGGGACAAGCCCCTTTGTaGTGGGAAACTCTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLGQAPL*WETLAY
Trigger: ATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCC...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCCAGAGAGGATTGTTaGTTTGCCCATGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPSREDC*FAHGQW
Trigger: CCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTGTTTGGCTAAGTGGGTaGCAGGCGGTATCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPVWLSG*QAVSCC
Trigger: GCAGCAGGATACCGCCTGGCACCCACTTAGCCAAAC...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTATCTATTGGGCTCCCCTaGCATGGTGGGCATCAGGAC +
Preference number: 4 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVSIGLP*HGGHQD
Trigger: GTCCTGATGCCCACCATGGCAGGGGAGCCCAATAGA...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCAATCTGGTCCCAATATaGTGGTTGGTCTCTGACCAG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRNLVPI*WLVSDQ
Trigger: CTGGTCAGAGACCAACCAGCATATTGGGACCAGATT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCAGTGGGAGGCATAACTaGTTTGCCTCCAGTCATCAT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRSGRHN*FASSHH
Trigger: ATGATGACTGGAGGCAAAGCAGTTATGCCTCCCACT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGAGCTTCCTCCCTCTCTGAGACAACGGTGCCACTGAGACTGCGTGAGATGCGACTCCTGTGTCCCGACTaGTCTGAGACATGGAATCAT +
Preference number: 4 (lower is better)
Translates to: GASSLSETTVPLRLREMRLLCPD*SETWNH
Trigger: ATGATTCCATGTCTCAGAGCAGTCGGGACACAGGAG...TCGCATCTCACGCAGTCTCAGTGGCACCGTTGTCTCAGAGAGGGAGGAAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGTCCGCAGATCCCCCATaGTGCTGGCATTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKSADPP*CWHSAA
Trigger: TGCTGCAGAATGCCAGCACCATGGGGGATCTGCGGA...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGTCTGCTAAGTCTGAGTaGTCTGAGTCCCATACCAGC +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLSAKSE*SESHTS
Trigger: GCTGGTATGGGACTCAGACCACTCAGACTTAGCAGA...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGACAGTTCAGATTGCTTaGCCCGGTCATCCGTCACTC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPTVQIA*PGHPSL
Trigger: GAGTGACGGATGACCGGGCCAAGCAATCTGAACTGT...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGAGTGTCACTTGAGATaGAGGGCTCCCTCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRECHLR*RAPSLN
Trigger: ATTCAGGGAGGGAGCCCTCCATCTCAAGTGACACTC...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
CDS-3UTR CCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGCCTGTTGGTGCTGCTaGATGGTTTGGAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRACWCC*MVWRHF
Trigger: GAAATGCCTCCAAACCATCCAGCAGCACCAACAGGC...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGCCTGTTGGTGCTGCTaGATGGTTTGGAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPACWCC*MVWRHF
Trigger: GAAATGCCTCCAAACCATCCAGCAGCACCAACAGGC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTAGAGCCTGGCCGTGCTaGGCCCCAGCGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: SWPRCPMLKLRITEPCDIRAWPC*APALVL
Trigger: CAGTACAAGCGCTGGGGCCCAGCACGGCCAGGCTCT...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGTTGTCCAGCCACCCATaGATGCTGTGGAGTCTACCT +
Preference number: 4 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLLSSHP*MLWSLP
Trigger: AGGTAGACTCCACAGCATCCATGGGTGGCTGGACAA...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTCCAGTTGGGCCTCTTaGCTTAACAATACTTGGAGC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRSSWAS*LNNTWS
Trigger: GCTCCAAGTATTGTTAAGCCAAGAGGCCCAACTGGA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATTCCAGTTGGGCCTCTTaGCTTAACAATACTTGGAGC +
Preference number: 4 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHSSWAS*LNNTWS
Trigger: GCTCCAAGTATTGTTAAGCCAAGAGGCCCAACTGGA...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGTCAAGGCAGATCTACTaGGGGAGCTGTGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKSRQIY*GSCAVG
Trigger: CCCCACAGCACAGCTCCCCCAGTAGATCTGCCTTGA...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGCCTCTTCCTTCTTGTaGAGGGAGCTTGCTGCAACT +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPASSFL*RELAAT
Trigger: AGTTGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGACAGGCATTATGGGGTaGCAGGTTCTATACAGGGGA +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLTGIMG*QVLYRG
Trigger: TCCCCTGTATAGAACCTGCCACCCCATAATGCCTGT...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGCAAGCCCCTTTGTGCTaGGAAACTCTGGCCTATAGG +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRQAPLC*ETLAYR
Trigger: CCTATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTG...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGCAAGCCCCTTTGTGCTaGGAAACTCTGGCCTATAGG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPQAPLC*ETLAYR
Trigger: CCTATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTG...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCAGAGAAGAATGTTCAGTaGACTCTTCCCAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPEKNVQ*TLPRKV
Trigger: CACTTTCCTGGGAAGAGTCCACTGAACATTCTTCTC...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGCTCTTGGTATATGTCTaGCTCTGCCAACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRLLVYV*LCQPGL
Trigger: CAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAG...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGGGAGGACTTCATTCCTaGCCTAGGTGCCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKGGLHS*PRCPML
Trigger: AAGCATGGGGCACCTAGGCCAGGAATGAAGTCCTCC...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGGAGAAGCCTGAAGACTaGCCTGATACAGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLEKPED*PDTETP
Trigger: TGGAGTCTCTGTATCAGGCCAGTCTTCAGGCTTCTC...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGCCTGTTTGGCTAAGTaGGTGCCAGGCGGTATCCTG +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFACLAK*VPGGIL
Trigger: CAGGATACCGCCTGGCACCCACTTAGCCAAACAGGC...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTGCCTGTTTGGCTAAGTaGGTGCCAGGCGGTATCCTG +
Preference number: 4 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPACLAK*VPGGIL
Trigger: CAGGATACCGCCTGGCACCCACTTAGCCAAACAGGC...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCTCTGCAGAGCCTGTTTaGCTAAGTGGGTGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFSAEPV*LSGCQA
Trigger: CGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGTCTGCAGAGCCTGTTTaGCTAAGTGGGTGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKSAEPV*LSGCQA
Trigger: CGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGTGTACTTGGCCCCTTaGGAAGTTTCACCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPVYLAP*EVSPLS
Trigger: TGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACAC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGTCCTTCCTGTGTACTTaGCCCCTTGGGAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLSFLCT*PLGKFH
Trigger: GTGAAACTTCCCAAGGGGCCAAGTACACAGGAAGGA...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGCTGGTCCCAATATGCTaGTTGGTCTCTGACCAGGGT +
Preference number: 4 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLLVPIC*LVSDQG
Trigger: ACCCTGGTCAGAGACCAACCAGCATATTGGGACCAG...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGGGTGGGAGGGTGAATaGAAAAGATCACTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPGWEGE*KRSLQD
Trigger: GTCCTGGAGTGATCTTTTCCATTCACCCTCCCACCC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGAGCCTTCCGAGTAGTTaGGACTACAGGCACGCACCG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKSLPSS*DYRHAP
Trigger: CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGGGGCTCAGGTGGAGGTaGGGACATAAAGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKGLRWR*GHKASR
Trigger: CCTGGATGCTTTATGTCCCCACCTCCACCTGAGCCC...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR CAA 72 bp CTTCCTTCTTGTGGAGGGAGCTTGCTGCAACTGCTGTaGTCACACCTAGAGCCTTGCAGCTTACCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LPSCGGSLLQLL*SHLEPCSLPSG
Trigger: CCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAGAAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CAA 72 bp TCTGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTaGTGCTGGGAAACTCTGGCCTATAGGTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SGTAQPENGQAP*CWETLAYRSPH
Trigger: GTGAGGAGACCTATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CAA 72 bp GGAAAGTGGTCTATCCCCACCCTCCAGAGAGGATTGTaGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGACC +
Preference number: 4 (lower is better)
Translates to: GKWSIPTLQRGL*LCPWPVAFLLT
Trigger: GGTCAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGGGATAGACCACTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CAA 72 bp CCAGGAAAGTGGTCTATCCCCACCCTCCAGAGAGGATaGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PGKWSIPTLQRG*LLCPWPVAFLL
Trigger: CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGGGATAGACCACTTTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCACCAAACATGCTTGGTaGAGGTTTCTCTCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRTKHAW*RFLSSF
Trigger: GAAAGACGAGAGAAACCTTCACCAAGCATGTTTGGT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGTGTCCCGACTGCTCTaGGACATGGAATCATTTTCC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPVSRLL*DMESFS
Trigger: GGAAAATGATTCCATGTCTCAGAGCAGTCGGGACAC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGGGAAGAACTGGATTTTaGCTCACTGCTGGTACTCTC +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLGRTGF*LTAGTL
Trigger: GAGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCC...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTTGCTGCTCTAAAAGGTaGGAGCCTGGCCGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VSTAAQILRPNISHLGQLCCSKR*EPGRAG
Trigger: CCCAGCACGGCCAGGCTCTCACCTTTTAGAGCAGCA...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTTGCTGCTCTAAAAGGTaGGAGCCTGGCCGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFCCSKR*EPGRAG
Trigger: CCCAGCACGGCCAGGCTCTCACCTTTTAGAGCAGCA...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGTGCGACTTTGGGATATaGCGCCAGGAAGGAACCAAC +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKCDFGI*RQEGTN
Trigger: GTTGGTTCCTTCCTGGCGTCATATCCCAAAGTCGCA...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCCCGTCACTCCTCCCCTaGTTCTGCAGTTCATCCAAG +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFPSLLP*FCSSSK
Trigger: CTTGGATGAACTGCAGAATCAGGGGAGGAGTGACGG...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGAGGGGAAGGCTGGGCTaGGCTGATGAATTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKRGRLG*ADEFEG
Trigger: TCCTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCT...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCCAGTGGCCTTTCTCTTaGCCCTGTGAGAAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFQWPFS*PCEKGG
Trigger: GCCTCCTTTCTCACAGGGTCAAGAGAAAGGCCACTG...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGCACGTATGGGAATCATaGGGGGAGGACTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRHVWES*GEDFIP
Trigger: AGGAATGAAGTCCTCCCCTCATGATTCCCATACGTG...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGATGTCATCAGAACCATaGCCACAGGGCTACATGTCC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPMSSEP*PQGYMS
Trigger: GGACATGTAGCCCTGTGGTCATGGTTCTGATGACAT...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGTTTACATTGACGACTaGGCAAGTGGCAATAATGGC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRVYIDD*ASGNNG
Trigger: GCCATTATTGCCACTTGCTCAGTCGTCAATGTAAAC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGGCAGCTCACCAAACATaGTTGGTGAAGGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLAAHQT*LVKVSL
Trigger: GAGAGAAACCTTCACCAAGCATGTTTGGTGAGCTGC...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000680396.1
CDS-3UTR GCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGGACCAGAGCTCCTCTTaGGCTCTATCAGTGACCCTT +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKDQSSS*ALSVTL
Trigger: AAGGGTCACTGATAGAGCGCAAGAGGAGCTCTGGTC...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
CDS-3UTR GCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGTCAGCCTGTTGGTGCTaGTGGATGGTTTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAESACWC*WMVWRH
Trigger: ATGCCTCCAAACCATCCAGCAGCACCAACAGGCTGA...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGTCAGCCTGTTGGTGCTaGTGGATGGTTTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKSACWC*WMVWRH
Trigger: ATGCCTCCAAACCATCCAGCAGCACCAACAGGCTGA...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCAATGTGGGACGATACTTaGTGGAAGAACTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPMWDDT*WKNWIL
Trigger: CAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACAT...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGCCTCCAGGATGCTACTaGTGTGCGACTTTGGGATAT +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPPPGCY*CATLGY
Trigger: ATATCCCAAAGTCGCACAGCAGTAGCATCCTGGAGG...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGAGTCTACCTCCAGGATaGTACTGCTGTGCGACTTTG +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRSLPPG*YCCATL
Trigger: CAAAGTCGCACAGCAGTAGCATCCTGGAGGTAGACT...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGCTGGCCACCTCTTCCTaGAATTCATCCAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLLATSS*NSSSSL
Trigger: AAGTGAACTGGATGAATTGCAGGAAGAGGTGGCCAG...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCACTGACTCTGCCTCTTaGAGGGACCTCTCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFTDSAS*RDLSKP
Trigger: CGGCTTTGAGAGGTCCCTGCAAGAGGCAGAGTCAGT...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGCTTGTGGAGGGAGCTTaGTGCAACTGCTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELLVEGA*CNCCCH
Trigger: GTGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAG...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTCATGGAGACACCCTaGATCCTCTGGAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAELMETP*ILWNCS
Trigger: TGAGCAGTTCCAGAGGATGCAGGGTGTCTCCATGAG...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTTGCCAGGCGGTATCCTaGTGCCCCCATCCAGAACAG +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFCQAVS*CPHPEQ
Trigger: CTGTTCTGGATGGGGGCAGCAGGATACCGCCTGGCA...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGCCTCCCCATGCCATCTaGAGAGCCTGTTTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKPPHAI*RACLAK
Trigger: CTTAGCCAAACAGGCTCTGCAGATGGCATGGGGAGG...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGAACCTGAAGGCCCTTaGTTCTTTCTGGTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPEPEGP*FFLVVW
Trigger: CCACACTACCAGAAAGAAGCAAGGGCCTTCAGGTTC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGAACCTGAAGGCCCTTaGTTCTTTCTGGTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVREPEGP*FFLVVW
Trigger: CCACACTACCAGAAAGAAGCAAGGGCCTTCAGGTTC...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATAAGGCTGTGTTAGTGTaGCTGACTCCATCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHKAVLV*LTPSVQ
Trigger: TTGAACAGATGGAGTCAGGCACACTAACACAGCCTT...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGCTTTGCTGGGGGCTATaGAGGTTGAGCTTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKLCWGL*RLSFEV
Trigger: CACCTCGAAGCTCAACCTCCATAGCCCCCAGCAAAG...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGGAGTGTCACTTGAGATaGAGGGCTCCCTCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAEECHLR*RAPSLN
Trigger: ATTCAGGGAGGGAGCCCTCCATCTCAAGTGACACTC...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATAATGTCGTAAGAAGGTaGCTTGCTTGGTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHNVVRR*LAWFIW
Trigger: CCAGATGAACCAAGCAAGCCACCTTCTTACGACATT...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCAATGTCGTAAGAAGGTaGCTTGCTTGGTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRNVVRR*LAWFIW
Trigger: CCAGATGAACCAAGCAAGCCACCTTCTTACGACATT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTCCAGATTCCATTCGCTaGATTAGTCGGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPPDSIR*ISRGCC
Trigger: GCAGCACCCCCGACTAATCCAGCGAATGGAATCTGG...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTACACCCATGGATGCTGTaGAGTCTACCTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVHPWML*SLPPGC
Trigger: GCATCCTGGAGGTAGACTCCACAGCATCCATGGGTG...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGCACCCATGGATGCTGTaGAGTCTACCTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKHPWML*SLPPGC
Trigger: GCATCCTGGAGGTAGACTCCACAGCATCCATGGGTG...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGATGAGTGTGACTCATaGCAGGAAGCAGGTGAATGG +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRDECDS*QEAGEW
Trigger: CCATTCACCTGCTTCCTGCCATGAGTCACACTCATC...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGCTCTGGGGCATCCAATaGCTCCCAACTATGATGAGA +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPLWGIQ*LPTMMR
Trigger: TCTCATCATAGTTGGGAGCCATTGGATGCCCCAGAG...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATGAAGTTTTGAGGCTTTaGCCTTGGAGGCATTGGTTA +
Preference number: 4 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHEVLRL*PWRHWL
Trigger: TAACCAATGCCTCCAAGGCCAAAGCCTCAAAACTTC...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCTGTGCTGGGAAACTCTaGCCTATAGGTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: WNCSARERTSPFVLGNSGCAGKL*PIGLLT
Trigger: AGTGAGGAGACCTATAGGCCAGAGTTTCCCAGCACA...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTGTGCTGGGAAACTCTaGCCTATAGGTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPCAGKL*PIGLLT
Trigger: AGTGAGGAGACCTATAGGCCAGAGTTTCCCAGCACA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGCTGTACTATCCCTCATaGAGACACCCTGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRLYYPS*RHPASS
Trigger: AGAGGATGCAGGGTGTCTCCATGAGGGATAGTACAG...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTCTCTTCCCAGGAAAGTaGTCTATCCCCACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPLFPGK*SIPTLQ
Trigger: CTGGAGGGTGGGGATAGACCACTTTCCTGGGAAGAG...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTCTTGGTATATGTCTaGCTCTGCCAACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAELLVYV*LCQPGL
Trigger: CAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAG...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGGAGAGACCAGGATCATaGGCTGAGTGCAACCTCCTC +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKERPGS*AECNLL
Trigger: GAGGAGGTTGCACTCAGCCCATGATCCTGGTCTCTC...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGATGCGACGTAAATTCTCTGCACTGTACTGCTCATCCTCCCCACACTCCCTGCGGGCATCAGGACATCTaGGGACAGGAACTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: RCDVNSLHCTAHPPHTPCGHQDI*GQELWL
Trigger: CAACCACAGTTCCTGTCCCCAGATGTCCTGATGCCC...GCAGGGAGTGTGGGGAGGATGAGCAGTACAGTGCAGAGAATTTACGTCGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCATAGCCAGAAACTGCTaGACACTCCTTGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRIARNC*TLLEVP
Trigger: AGGAACTTCAAGGAGTGTCCAGCAGTTTCTGGCTAT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGTCCTTCCTGTGTACTTaGCCCCTTGGGAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRSFLCT*PLGKFH
Trigger: GTGAAACTTCCCAAGGGGCCAAGTACACAGGAAGGA...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGGGGTGGGAGGGTGAATaGAAAAGATCACTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELGWEGE*KRSLQD
Trigger: GTCCTGGAGTGATCTTTTCCATTCACCCTCCCACCC...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGCCTCCAGTCATCATCTaGGGGCATATCTACTCTTCG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPPPVII*GHIYSS
Trigger: CGAAGAGTAGATATGCCCCCAGATGATGACTGGAGG...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGAATGTACCATCTGGATaGAAGGCAGCGGATCAGAAG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPNVPSG*KAADQK
Trigger: CTTCTGATCCGCTGCCTTTCATCCAGATGGTACATT...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGACACACGGCGAATCCTaGTCCTCTCTCCACAGTTGC +
Preference number: 4 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRTHGES*SSLHSC
Trigger: GCAACTGTGGAGAGAGGATCAGGATTCGCCGTGTGT...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR TCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGTGTTCGAGTGTCACTTaGGATGGAGGGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWCSSVT*DGGLPP
Trigger: GGGAGGGAGCCCTCCATCTCAAGTGACACTCGAACA...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR TCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTAGGGATAGCTCTCCGTTaGGGAATCTGTTCGAGTGTC +
Preference number: 4 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVGIALR*GICSSV
Trigger: GACACTCGAACAGATTCCTCAACGGAGAGCTATCCC...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGGAAGAACTGGATTTTaGCTCACTGCTGGTACTCTC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPGRTGF*LTAGTL
Trigger: GAGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGATCCCTGTAGACATTTaGGCTCTCAGGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRIPVDI*ALRQGC
Trigger: GCAGCCCTGCCTGAGAGCTCAAATGTCTACAGGGAT...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCGACGGCTGCTGTGGTaGTTGCTGCTGCTGCATGCG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWRRLLW*LLLLHA
Trigger: CGCATGCAGCAGCAGCAATCACCACAGCAGCCGTCG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTGGAACAGCTGTTCTTaGGCAATGCCTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPWNSCS*AMPLPS
Trigger: AGAAGGAAGAGGCATTGCTCAAGAACAGCTGTTCCA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCAACAGTGAAGCACAAATaGAGAAGCAACAGGCATTAT +
Preference number: 4 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPTVKHK*RSNRHY
Trigger: ATAATGCCTGTTGCTTCTTCATTTGTGCTTCACTGT...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATAATCACAGAACCTTGTaGTATTCACCCAGGAATCCA +
Preference number: 4 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHNHRTL*YSPRNP
Trigger: TGGATTCCTGGGTGAATATCACAAGGTTCTGTGATT...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTACAGAGACTCCAATTCTaGGGTCTCCTGCTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVQRLQF*GLLLCV
Trigger: GACACAGAGCAGGAGACCTCAGAATTGGAGTCTCTG...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTACCAGGATCATGGGCTaGGTGCAACCTCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: VSTAAQILRPNISHLGQLTRIMG*VQPPPH
Trigger: ATGGGGAGGAGGTTGCACTCAGCCCATGATCCTGGT...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTGGTGGGTACACAGGATaGACAATGGGAGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFGGYTG*TMGGWE
Trigger: CTCCCACCCTCCCATTGTTCATCCTGTGTACCCACC...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGGACCTCAGGGGTACATaGAGACTGCTAGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRDLRGT*RLLDGG
Trigger: CCCACCATCTAGCAGTCTTCATGTACCCCTGAGGTC...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTATGGTCTCAATCTCCTaGCCTCGTGATCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFMVSIS*PRDPPA
Trigger: GGCGGGTGGATCACGAGGTCAGGAGATTGAGACCAT...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGGCACAACCATGGCAGTaGTGCAGGGTACCAACGCTG +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWAQPWQ*CRVPTL
Trigger: CAGCGTTGGTACCCTGCATCACTGCCATGGTTGTGC...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGATGTCATCAGAACCATaGCCACAGGGCTACATGTCC +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELMSSEP*PQGYMS
Trigger: GGACATGTAGCCCTGTGGTCATGGTTCTGATGACAT...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCATCTGTTCAAAAGGGTaGATGTTATGTTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRICSKG*MLCWQL
Trigger: GAGCTGCCAACATAACATTCACCCTTTTGAACAGAT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGATCCTGGAAAGTCTTTaGCAGAGCACTGCGGAGAGT +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKILESL*QSTAES
Trigger: ACTCTCCGCAGTGCTCTGGCAAAGACTTTCCAGGAT...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000680396.1
CDS-3UTR GCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGCAGCTCACCAAACATaGTTGGTGAAGGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPAAHQT*LVKVSL
Trigger: GAGAGAAACCTTCACCAAGCATGTTTGGTGAGCTGC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGGCAGATCCCCCATGGTaGTGGCATTCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWADPPW*WHSAAA
Trigger: AGCTGCTGCAGAATGCCAGCACCATGGGGGATCTGC...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR GCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGAAGTACAGTTCAGATTaGTTGGCCCGGTCATCCGTC +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKKYSSD*LARSSV
Trigger: GACGGATGACCGGGCCAAGCAATCTGAACTGTACTT...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
CDS-3UTR GCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTGTCGTAGCATGTCCTaGTGTATGACTGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPCRSMS*CMTGTQ
Trigger: CTGAGTTCCAGTCATACAGCAGGACATGCTACGACA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGGACCAGAGCTCCTCTTaGGCTCTATCAGTGACCCTT +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKDQSSS*ALSVTL
Trigger: AAGGGTCACTGATAGAGCGCAAGAGGAGCTCTGGTC...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGTCAGCCTGTTGGTGCTaGTGGATGGTTTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKSACWC*WMVWRH
Trigger: ATGCCTCCAAACCATCCAGCAGCACCAACAGGCTGA...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTCTCCTCCTCTGCCCCTaGAGTGAGAGCCTACATTGG +
Preference number: 4 (lower is better)
Translates to: VSTAAQILRPNISHLGQLLLLCP*SESLHW
Trigger: CCAATGTAGGCTCTCACTGCAGGGGCAGAGGAGGAG...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCATGTGGGACGATACTTaGTGGAAGAACTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRMWDDT*WKNWIL
Trigger: CAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACAT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGTGAGAGCCTGGCCGTaGTGGGCCCCAGCGCTTGTA +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWVRAWP*WAPALV
Trigger: TACAAGCGCTGGGGCCCAGCACGGCCAGGCTCTCAC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCCTCCAGGATGCTACTaGTGTGCGACTTTGGGATAT +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAEPPGCY*CATLGY
Trigger: ATATCCCAAAGTCGCACAGCAGTAGCATCCTGGAGG...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGCCTCCAGGATGCTACTaGTGTGCGACTTTGGGATAT +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELPPGCY*CATLGY
Trigger: ATATCCCAAAGTCGCACAGCAGTAGCATCCTGGAGG...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGAGTCTACCTCCAGGATaGTACTGCTGTGCGACTTTG +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELSLPPG*YCCATL
Trigger: CAAAGTCGCACAGCAGTAGCATCCTGGAGGTAGACT...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGCTGGCCACCTCTTCCTaGAATTCATCCAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLLATSS*NSSSSL
Trigger: AAGTGAACTGGATGAATTGCAGGAAGAGGTGGCCAG...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGACTGACTCTGCCTCTTaGAGGGACCTCTCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRTDSAS*RDLSKP
Trigger: CGGCTTTGAGAGGTCCCTGCAAGAGGCAGAGTCAGT...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTAGGCAGGCTGAGGGCTaGGACGGCTGCTGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVRQAEG*DGCCGD
Trigger: ATCACCACAGCAGCCGTCGCAGCCCTCAGCCTGCCT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGCAAACTCTGTATCCATaGCGGATTCCAGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKQTLYP*RIPVGP
Trigger: AGGCCCAACTGGAATCCGGCATGGATACAGAGTTTG...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGCTTTAGGTAAACCTTaGCTGTGGAATGCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPALGKP*LWNAEG
Trigger: ACCCTCTGCATTCCACAGGCAAGGTTTACCTAAAGC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTCTTGTGGAGGGAGCTTaGTGCAACTGCTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPLVEGA*CNCCCH
Trigger: GTGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAG...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGGGACAAGCCCCTTTGTaGTGGGAAACTCTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKGQAPL*WETLAY
Trigger: ATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCC...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACTGCATCCTCTGGAACTaGTCAGCCAGAGAACGGACA +
Preference number: 4 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNCILWN*SARERT
Trigger: TGTCCGTTCTCTGGCTGAGCAGTTCCAGAGGATGCA...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGTGCATCCTCTGGAACTaGTCAGCCAGAGAACGGACA +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKCILWN*SARERT
Trigger: TGTCCGTTCTCTGGCTGAGCAGTTCCAGAGGATGCA...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGCTCATGGAGACACCCTaGATCCTCTGGAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKLMETP*ILWNCS
Trigger: TGAGCAGTTCCAGAGGATGCAGGGTGTCTCCATGAG...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCACAGGCGGTATCCTGCTaGCCCCATCCAGAACAGCCA +
Preference number: 4 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPQAVSC*PHPEQP
Trigger: TGGCTGTTCTGGATGGGGGCAGCAGGATACCGCCTG...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGCCTCCCCATGCCATCTaGAGAGCCTGTTTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRPPHAI*RACLAK
Trigger: CTTAGCCAAACAGGCTCTGCAGATGGCATGGGGAGG...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACTTCTCTGCACTGTACTaGTCATCCTCCCCACACTCC +
Preference number: 4 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNFSALY*SSSPHS
Trigger: GGAGTGTGGGGAGGATGAGCAGTACAGTGCAGAGAA...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR GCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGAATCTGGTCCCAATATaGTGGTTGGTCTCTGACCAG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPNLVPI*WLVSDQ
Trigger: CTGGTCAGAGACCAACCAGCATATTGGGACCAGATT...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGGAACCTGAAGGCCCTTaGTTCTTTCTGGTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAEEPEGP*FFLVVW
Trigger: CCACACTACCAGAAAGAAGCAAGGGCCTTCAGGTTC...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGCTCCTCACCCTCTATTaGCTTGTCTCATCATCCTCT +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPLLTLY*LVSSSS
Trigger: AGAGGATGATGAGACAAGGCAATAGAGGGTGAGGAG...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGGCAGCTGTTTTGCCCTaGCTCATTGCTGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKAAVLP*LIAEAF
Trigger: AAAGGCCTCAGCAATGAGCCAGGGCAAAACAGCTGC...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTGGGAAATGCAGTGTTaGGCAGTACATATATCCTCT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRWEMQC*AVHISS
Trigger: AGAGGATATATGTACTGCCCAACACTGCATTTCCCA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGTCTGCTAAGTCTGAGTaGTCTGAGTCCCATACCAGC +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAESAKSE*SESHTS
Trigger: GCTGGTATGGGACTCAGACCACTCAGACTTAGCAGA...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGAGGCAGGTCCTGGGTaGAAACTGGGGTACCCTGGG +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCEAGPG*KLGYPG
Trigger: CCCAGGGTACCCCAGTTTCCACCCAGGACCTGCCTC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCAGACTGGAACTCAGCTTaGGGAGGCAGGTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPDWNSA*GGRSWV
Trigger: CACCCAGGACCTGCCTCCCCAAGCTGAGTTCCAGTC...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGCCTGTTGGTGCTGCTaGATGGTTTGGAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFACWCC*MVWRHF
Trigger: GAAATGCCTCCAAACCATCCAGCAGCACCAACAGGC...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGGTTTGGGTCTCCATGTaGGACGATACTTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKVWVSM*DDTCWK
Trigger: CTTCCAGCAAGTATCGTCCCACATGGAGACCCAAAC...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCAGAGATTCTCGTTTaGGTCTCCATGTGGGACGAT +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPSEILV*VSMWDD
Trigger: ATCGTCCCACATGGAGACCCAAACGAGAATCTCTGA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCTCAGAGATTCTCGTTTaGGTCTCCATGTGGGACGAT +
Preference number: 4 (lower is better)
Translates to: WNCSARERTSPFVLGNSGSEILV*VSMWDD
Trigger: ATCGTCCCACATGGAGACCCAAACGAGAATCTCTGA...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTCCCCAGCGCTTGTACTaGGGGCTTGGTCCACCAAAT +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFPQRLY*GLGPPN
Trigger: ATTTGGTGGACCAAGCCCCCAGTACAAGCGCTGGGG...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAAGAGCCTGGCCGTGCTaGGCCCCAGCGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPRAWPC*APALVL
Trigger: CAGTACAAGCGCTGGGGCCCAGCACGGCCAGGCTCT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCACTGCTGTGCGACTTTaGGATATGACGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFTAVRL*DMTPGR
Trigger: CCTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGT...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGTTGTCCAGCCACCCATaGATGCTGTGGAGTCTACCT +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKLSSHP*MLWSLP
Trigger: AGGTAGACTCCACAGCATCCATGGGTGGCTGGACAA...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGGATGAGTGTGACTCATaGCAGGAAGCAGGTGAATGG +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELDECDS*QEAGEW
Trigger: CCATTCACCTGCTTCCTGCCATGAGTCACACTCATC...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp AGATGCGACGTAAATTCTCTGCACTGTACTGCTCATCCTCCCCACACTCCCTGCGCCTCTTCCTTCTTGTaGAGGGAGCTTGCTGCAACT +
Preference number: 4 (lower is better)
Translates to: RCDVNSLHCTAHPPHTPCASSFL*RELAAT
Trigger: AGTTGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGC...GCAGGGAGTGTGGGGAGGATGAGCAGTACAGTGCAGAGAATTTACGTCGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGGCCTCTTCCTTCTTGTaGAGGGAGCTTGCTGCAACT +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKASSFL*RELAAT
Trigger: AGTTGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGC...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTCACCCCTCTCAGAGGTaGCTATTCCAGGCATCACCG +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFHPSQR*LFQASP
Trigger: CGGTGATGCCTGGAATAGCCACCTCTGAGAGGGGTG...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGTATACAGGGGAAGGCTaGGCTGAGCTGATGAATTTG +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRYTGEG*AELMNL
Trigger: CAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATA...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGCTGTACTATCCCTCATaGAGACACCCTGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELLYYPS*RHPASS
Trigger: AGAGGATGCAGGGTGTCTCCATGAGGGATAGTACAG...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGTTGTTGCTTTGCCCATaGCCAGTGGCCTTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAELLLCP*PVAFLL
Trigger: CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAA...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGTTGTTGCTTTGCCCATaGCCAGTGGCCTTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELLLLCP*PVAFLL
Trigger: CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAA...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGGAGAAGCCTGAAGACTaGCCTGATACAGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAEEKPED*PDTETP
Trigger: TGGAGTCTCTGTATCAGGCCAGTCTTCAGGCTTCTC...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGTGGGGACAGGAACTGTaGTTGGGGAAGGTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKWGQEL*LGKVEL
Trigger: CAACTCTACCTTCCCCAACCACAGTTCCTGTCCCCA...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGGCTCCCCTGCCATGGTaGGCATCAGGACATCTGGGG +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGAPLPW*ASGHLG
Trigger: CCCCAGATGTCCTGATGCCCACCATGGCAGGGGAGC...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCTGGGCTCCCCTGCCATaGTGGGCATCAGGACATCTG +
Preference number: 4 (lower is better)
Translates to: ISAVEVFERPGSWAECNLWAPLP*WASGHL
Trigger: CAGATGTCCTGATGCCCACCATGGCAGGGGAGCCCA...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGCTGGTCCCAATATGCTaGTTGGTCTCTGACCAGGGT +
Preference number: 4 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKLVPIC*LVSDQG
Trigger: ACCCTGGTCAGAGACCAACCAGCATATTGGGACCAG...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGTTGAGGATTGCACCCTaGAGTAGTCAGGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLLRIAP*SSQESG
Trigger: ACCAGATTCCTGACTACTCCAGGGTGCAATCCTCAA...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTTGAGGATTGCACCCTaGAGTAGTCAGGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPLRIAP*SSQESG
Trigger: ACCAGATTCCTGACTACTCCAGGGTGCAATCCTCAA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTGGGCTCAGGTGGAGGTaGGGACATAAAGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: VSTAAQILRPNISHLGQLGLRWR*GHKASR
Trigger: CCTGGATGCTTTATGTCCCCACCTCCACCTGAGCCC...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGGGGCTCAGGTGGAGGTaGGGACATAAAGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWGLRWR*GHKASR
Trigger: CCTGGATGCTTTATGTCCCCACCTCCACCTGAGCCC...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGGTCATTGCAAATTTCTaGTGGGAAATGCAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLVIANF*WEMQCW
Trigger: CCAACACTGCATTTCCCATCAGAAATTTGCAATGAC...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000680396.1
CDS-3UTR TCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGGGTCATCCGTCACTCTaGAAAACAGATCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKGHPSL*KTDHPA
Trigger: AGCTGGGTGATCTGTTTTTCAGAGTGACGGATGACC...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTGGGCCCAATCTCCTTaGCATGAGCATCATCAAAAT +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPWAQSP*HEHHQN
Trigger: ATTTTGATGATGCTCATGTCAAGGAGATTGGGCCCA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGGCTGATAATGCCCCTTaGTGCATTTGGTCACCACAT +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKADNAP*CIWSPH
Trigger: ATGTGGTGACCAAATGCATCAAGGGGCATTATCAGC...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
CDS-3UTR TCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGGCATGTCCTGCTGTATaGCTGGAACTCAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWACPAV*LELSLG
Trigger: CCCCAAGCTGAGTTCCAGTCATACAGCAGGACATGC...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR TCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTAGTGTCCCGACTGCTCTaGGACATGGAATCATTTTCC +
Preference number: 4 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVVSRLL*DMESFS
Trigger: GGAAAATGATTCCATGTCTCAGAGCAGTCGGGACAC...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGCTTGCGCTCTATCAGTaGCCCTTTCTTGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKLALYQ*PFLGCV
Trigger: CACACATCCAAGAAAGGGTCACTGATAGAGCGCAAG...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
CDS-3UTR TCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGCTTGCGCTCTATCAGTaGCCCTTTCTTGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKLALYQ*PFLGCV
Trigger: CACACATCCAAGAAAGGGTCACTGATAGAGCGCAAG...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGAGGAACCAACCCAGCTaGTCTCTTAGCACTTGGATC +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKRNQPS*SLSTWI
Trigger: GATCCAAGTGCTAAGAGATCAGCTGGGTTGGTTCCT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGAGGGGAAGGCTGGGCTaGGCTGATGAATTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRRGRLG*ADEFEG
Trigger: TCCTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCT...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGACAGGATCAGGACAGTaGAGCACAAATGAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLTGSGQ*STNEEA
Trigger: TGCTTCTTCATTTGTGCTTCACTGTCCTGATCCTGT...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCACAAACTTCTATCCTTaGAACCTGTACTATCCCTCA +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRTNFYP*NLYYPS
Trigger: TGAGGGATAGTACAGGTTTCAAGGATAGAAGTTTGT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGTTTCTCTTGACCCTGTaGGAAAGGAGGCTTAGAATC +
Preference number: 4 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLFLLTL*ERRLRI
Trigger: GATTCTAAGCCTCCTTTCTCACAGGGTCAAGAGAAA...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGCACGTATGGGAATCATaGGGGGAGGACTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKHVWES*GEDFIP
Trigger: AGGAATGAAGTCCTCCCCTCATGATTCCCATACGTG...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCCTGCTGGACACTCCTTaGAGTTCCTGGGAGTCTATT +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFLLDTP*SSWESI
Trigger: AATAGACTCCCAGGAACTTCAAGGAGTGTCCAGCAG...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCGGTGGGTACACAGGATaGACAATGGGAGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: ISAVEVFERPGSWAECNLGGYTG*TMGGWE
Trigger: CTCCCACCCTCCCATTGTTCATCCTGTGTACCCACC...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGAATCTCCTGACCTCGTaGTCCACCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWNLLTS*STRLSL
Trigger: GAGGCTGAGGCGGGTGGATCACGAGGTCAGGAGATT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGATGTCATCAGAACCATaGCCACAGGGCTACATGTCC +
Preference number: 4 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKMSSEP*PQGYMS
Trigger: GGACATGTAGCCCTGTGGTCATGGTTCTGATGACAT...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGATCTGTTCAAAAGGGTaGATGTTATGTTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLICSKG*MLCWQL
Trigger: GAGCTGCCAACATAACATTCACCCTTTTGAACAGAT...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTCCTTCTATTTTTCTTaGACAGCCTCCATAAAGTCC +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRSFYFS*TASIKS
Trigger: GGACTTTATGGAGGCTGTTCAAGAAAAATAGAAGGA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTAAGTGCCACAAAACCTaGAGGGCACTGTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPKCHKT*RALLRK
Trigger: CTTCCTCAACAGTGCCCTGCAGGTTTTGTGGCACTT...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR GCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGAAGTGCCACAAAACCTaGAGGGCACTGTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKKCHKT*RALLRK
Trigger: CTTCCTCAACAGTGCCCTGCAGGTTTTGTGGCACTT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGAAGTACAGTTCAGATTaGTTGGCCCGGTCATCCGTC +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKKYSSD*LARSSV
Trigger: GACGGATGACCGGGCCAAGCAATCTGAACTGTACTT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACGTCCTGTGTCCCGACTaGTCTGAGACATGGAATCAT +
Preference number: 4 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNVLCPD*SETWNH
Trigger: ATGATTCCATGTCTCAGAGCAGTCGGGACACAGGAC...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR GCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGGCTGGTCTCCTCCTCTaGCCCTGCAGTGAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKAGLLL*PCSESL
Trigger: TAGGCTCTCACTGCAGGGGCAGAGGAGGAGACCAGC...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTGCTGTTCCTCTCACTaGTTTCATAGCCAGATTCCA +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPCCSSH*FHSQIP
Trigger: TGGAATCTGGCTATGAAAGCAGTGAGAGGAACAGCA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGCCTCCAGGATGCTACTaGTGTGCGACTTTGGGATAT +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKPPGCY*CATLGY
Trigger: ATATCCCAAAGTCGCACAGCAGTAGCATCCTGGAGG...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGCAAACTCTGTATCCATaGCGGATTCCAGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKQTLYP*RIPVGP
Trigger: AGGCCCAACTGGAATCCGGCATGGATACAGAGTTTG...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGACCTTGCCTGTGGAATaGAGAGGGTTCAATGTTGTC +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAETLPVE*RGFNVV
Trigger: GACAACATTGAACCCTCTGCATTCCACAGGCAAGGT...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGTCACACCTAGAGCCTTaGAGCTTACCCTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWSHLEP*SLPSGA
Trigger: TGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGA...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGAATTCTGAGGTCTCCTaGTCTGTGTCTTGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRNSEVS*SVSWFQ
Trigger: TTGGAACCAAGACACAGAGCAGGAGACCTCAGAATT...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGAATTCTGAGGTCTCCTaGTCTGTGTCTTGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPNSEVS*SVSWFQ
Trigger: TTGGAACCAAGACACAGAGCAGGAGACCTCAGAATT...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGCAGGCGGTATCCTGCTaGCCCCATCCAGAACAGCCA +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKQAVSC*PHPEQP
Trigger: TGGCTGTTCTGGATGGGGGCAGCAGGATACCGCCTG...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCAGGCGGTATCCTGCTaGCCCCATCCAGAACAGCCA +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCQAVSC*PHPEQP
Trigger: TGGCTGTTCTGGATGGGGGCAGCAGGATACCGCCTG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTGCCAGGCGGTATCCTaGTGCCCCCATCCAGAACAG +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCCQAVS*CPHPEQ
Trigger: CTGTTCTGGATGGGGGCAGCAGGATACCGCCTGGCA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGCACATAGCCAGAAACTaGTGGACACTCCTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLHIARN*WTLLEV
Trigger: AACTTCAAGGAGTGTCCAGCAGTTTCTGGCTATGTG...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGGAACCTGAAGGCCCTTaGTTCTTTCTGGTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKEPEGP*FFLVVW
Trigger: CCACACTACCAGAAAGAAGCAAGGGCCTTCAGGTTC...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACACTCTAGCCCTGATCTaGTCTCTTCTGGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNTLALI*SLLGAS
Trigger: AGATGCTCCCAGAAGAGAGCAGATCAGGGCTAGAGT...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCACTCTAGCCCTGATCTaGTCTCTTCTGGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFTLALI*SLLGAS
Trigger: AGATGCTCCCAGAAGAGAGCAGATCAGGGCTAGAGT...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGCAGGGTACCAACGCTaGCACAGTAGTTTATTTTGT +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPAGYQR*HSSLFC
Trigger: ACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGAAGGCTGTGTTAGTGTaGCTGACTCCATCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPKAVLV*LTPSVQ
Trigger: TTGAACAGATGGAGTCAGGCACACTAACACAGCCTT...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATAATCGTGATAATCTGTaGAGCATTCATCAACACACG +
Preference number: 4 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHNRDNL*SIHQHT
Trigger: CGTGTGTTGATGAATGCTCCACAGATTATCACGATT...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTTCTGCTAAGTCTGAGTaGTCTGAGTCCCATACCAGC +
Preference number: 4 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPSAKSE*SESHTS
Trigger: GCTGGTATGGGACTCAGACCACTCAGACTTAGCAGA...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGAGGCAGGTCCTGGGTaGAAACTGGGGTACCCTGGG +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWEAGPG*KLGYPG
Trigger: CCCAGGGTACCCCAGTTTCCACCCAGGACCTGCCTC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATTCAGTGACCCTTTCTTaGATGTGTGTTTCTGATTAC +
Preference number: 4 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHSVTLS*MCVSDY
Trigger: GTAATCAGAAACACACATCCAAGAAAGGGTCACTGA...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTTGGTATCCCGAGGCCTaGGGCTCATCGCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISWYPEA*GSSPFL
Trigger: GAGGAAAGGCGATGAGCCCCAGGCCTCGGGATACCA...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTGGTATCCCGAGGCCTaGGGCTCATCGCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWWYPEA*GSSPFL
Trigger: GAGGAAAGGCGATGAGCCCCAGGCCTCGGGATACCA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGGTTGGTGCTGCTGGATaGTTTGGAGGCATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKVGAAG*FGGISR
Trigger: CCTAGAAATGCCTCCAAACCATCCAGCAGCACCAAC...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GGAGCTTCCTCCCTCTCTGAGACAACGGTGCCACTGAGACTGCGTGAGATGCGACTGAGAAGCCAGGGATaGTCTGTTATGGATCATATT +
Preference number: 4 (lower is better)
Translates to: GASSLSETTVPLRLREMRLRSQG*SVMDHI
Trigger: AATATGATCCATAACAGACCATCCCTGGCTTCTCAG...TCGCATCTCACGCAGTCTCAGTGGCACCGTTGTCTCAGAGAGGGAGGAAGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCATTTTGACTCACTGCTaGTACTCTCTATTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRILTHC*YSLFPS
Trigger: ACTGGGAAATAGAGAGTACCAGCAGTGAGTCAAAAT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGGTTTGGGTCTCCATGTaGGACGATACTTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKVWVSM*DDTCWK
Trigger: CTTCCAGCAAGTATCGTCCCACATGGAGACCCAAAC...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGTCAGAGATTCTCGTTTaGGTCTCCATGTGGGACGAT +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAESEILV*VSMWDD
Trigger: ATCGTCCCACATGGAGACCCAAACGAGAATCTCTGA...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCACCCCAGCGCTTGTACTaGGGGCTTGGTCCACCAAAT +
Preference number: 4 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPPQRLY*GLGPPN
Trigger: ATTTGGTGGACCAAGCCCCCAGTACAAGCGCTGGGG...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGTTGTCCAGCCACCCATaGATGCTGTGGAGTCTACCT +
Preference number: 4 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRLSSHP*MLWSLP
Trigger: AGGTAGACTCCACAGCATCCATGGGTGGCTGGACAA...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTAGGCTGTTCACTTGTTaGCTGAGAGAGAGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFRLFTC*LRESPR
Trigger: GCGGGGACTCTCTCTCAGCCAACAAGTGAACAGCCT...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGTCCAGTTGGGCCTCTTaGCTTAACAATACTTGGAGC +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKSSWAS*LNNTWS
Trigger: GCTCCAAGTATTGTTAAGCCAAGAGGCCCAACTGGA...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCTCAAGGCAGATCTACTaGGGGAGCTGTGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: ISAVEVFERPGSWAECNLSRQIY*GSCAVG
Trigger: CCCCACAGCACAGCTCCCCCAGTAGATCTGCCTTGA...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGGGTAAACCTTGCCTGTaGAATGCAGAGGGTTCAATG +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELGKPCL*NAEGSM
Trigger: CATTGAACCCTCTGCATTCCACAGGCAAGGTTTACC...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACCTCTGGGGCATCCAATaGCTCCCAACTATGATGAGA +
Preference number: 4 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNLWGIQ*LPTMMR
Trigger: TCTCATCATAGTTGGGAGCCATTGGATGCCCCAGAG...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AGATGCGACGTAAATTCTCTGCACTGTACTGCTCATCCTCCCCACACTCCCTGCCTCTGGGGCATCCAATaGCTCCCAACTATGATGAGA +
Preference number: 4 (lower is better)
Translates to: RCDVNSLHCTAHPPHTPCLWGIQ*LPTMMR
Trigger: TCTCATCATAGTTGGGAGCCATTGGATGCCCCAGAG...GCAGGGAGTGTGGGGAGGATGAGCAGTACAGTGCAGAGAATTTACGTCGCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR CCA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGACAGGCATTATGGGGTaGCAGGTTCTATACAGGGGA +
Preference number: 4 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKTGIMG*QVLYRG
Trigger: TCCCCTGTATAGAACCTGCCACCCCATAATGCCTGT...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGAAGCAACAGGCATTATaGGGTGGCAGGTTCTATACA +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPKQQAL*GGRFYT
Trigger: TGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCAAGCAACAGGCATTATaGGGTGGCAGGTTCTATACA +
Preference number: 4 (lower is better)
Translates to: WNCSARERTSPFVLGNSGKQQAL*GGRFYT
Trigger: TGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGAAGTTTTGAGGCTTTaGCCTTGGAGGCATTGGTTA +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVREVLRL*PWRHWL
Trigger: TAACCAATGCCTCCAAGGCCAAAGCCTCAAAACTTC...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp AGATGCGACGTAAATTCTCTGCACTGTACTGCTCATCCTCCCCACACTCCCTGCTGTGCTGGGAAACTCTaGCCTATAGGTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: RCDVNSLHCTAHPPHTPCCAGKL*PIGLLT
Trigger: AGTGAGGAGACCTATAGGCCAGAGTTTCCCAGCACA...GCAGGGAGTGTGGGGAGGATGAGCAGTACAGTGCAGAGAATTTACGTCGCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGCTGTACTATCCCTCATaGAGACACCCTGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKLYYPS*RHPASS
Trigger: AGAGGATGCAGGGTGTCTCCATGAGGGATAGTACAG...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTTTGTTGCTTTGCCCATaGCCAGTGGCCTTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPLLLCP*PVAFLL
Trigger: CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAA...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGGAGAAGAATGTTCAGTaGACTCTTCCCAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLEKNVQ*TLPRKV
Trigger: CACTTTCCTGGGAAGAGTCCACTGAACATTCTTCTC...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGAGAAGAATGTTCAGTaGACTCTTCCCAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPEKNVQ*TLPRKV
Trigger: CACTTTCCTGGGAAGAGTCCACTGAACATTCTTCTC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGGGAGGACTTCATTCCTaGCCTAGGTGCCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWGGLHS*PRCPML
Trigger: AAGCATGGGGCACCTAGGCCAGGAATGAAGTCCTCC...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGTCTTGGTTCCAATGTaGATGCAAAAGGATGTGATT +
Preference number: 4 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRVLVPM*MQKDVI
Trigger: AATCACATCCTTTTGCATCCACATTGGAACCAAGAC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGATGAATCAAAACTGTaGGAAGAAACCGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPDESKL*EETGAS
Trigger: GGAAGCTCCGGTTTCTTCCCACAGTTTTGATTCATC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339859.8
ENST00000466048.6
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGCTCCCCTGCCATGGTaGGCATCAGGACATCTGGGG +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPAPLPW*ASGHLG
Trigger: CCCCAGATGTCCTGATGCCCACCATGGCAGGGGAGC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGCTCCCCTGCCATGGTaGGCATCAGGACATCTGGGG +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWAPLPW*ASGHLG
Trigger: CCCCAGATGTCCTGATGCCCACCATGGCAGGGGAGC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp TGCCCGGTTTCCAAAGGCTTCCTCACGTTTGATGAATCAAAACTGTGGGAAGAATGGGCTCCCCTGCCATaGTGGGCATCAGGACATCTG +
Preference number: 4 (lower is better)
Translates to: CPVSKGFLTFDESKLWEEWAPLP*WASGHL
Trigger: CAGATGTCCTGATGCCCACCATGGCAGGGGAGCCCA...TTCTTCCCACAGTTTTGATTCATCAAACGTGAGGAAGCCTTTGGAAACCGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGATAGCCAGAAACTGCTaGACACTCCTTGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPIARNC*TLLEVP
Trigger: AGGAACTTCAAGGAGTGTCCAGCAGTTTCTGGCTAT...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCATGAAGACTGCTAGATaGTGGGTACACAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: WNCSARERTSPFVLGNSGMKTAR*WVHRMN
Trigger: GTTCATCCTGTGTACCCACCATCTAGCAGTCTTCAT...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGGGATTTGTGCCTTTTTaGCAGGAATTTCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLGFVPF*QEFLSA
Trigger: AGCAGACAGAAATTCCTGCCAAAAAGGCACAAATCC...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS-3UTR TCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCAATGTACCATCTGGATaGAAGGCAGCGGATCAGAAG +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFNVPSG*KAADQK
Trigger: CTTCTGATCCGCTGCCTTTCATCCAGATGGTACATT...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000680396.1
CDS-3UTR TCA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCAACACACGGCGAATCCTaGTCCTCTCTCCACAGTTGC +
Preference number: 4 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPTHGES*SSLHSC
Trigger: GCAACTGTGGAGAGAGGATCAGGATTCGCCGTGTGT...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGGAGGGCTCCCTCCCTaGATCTTCACTGTCGTAGCA +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVGGLPP*IFTVVA
Trigger: TGCTACGACAGTGAAGATTCAGGGAGGGAGCCCTCC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGCAGAAGAGAAGTGACTaGCCACAGACTCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWQKRSD*PQTHGG
Trigger: CCCACCATGAGTCTGTGGTCAGTCACTTCTCTTCTG...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTAGGAAGAACTGGATTTTaGCTCACTGCTGGTACTCTC +
Preference number: 4 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVGRTGF*LTAGTL
Trigger: GAGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCC...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGCTGCTCTAAAAGGTaGGAGCCTGGCCGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPCCSKR*EPGRAG
Trigger: CCCAGCACGGCCAGGCTCTCACCTTTTAGAGCAGCA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACTGGAACAGCTGTTCTTaGGCAATGCCTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNWNSCS*AMPLPS
Trigger: AGAAGGAAGAGGCATTGCTCAAGAACAGCTGTTCCA...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GGAGCTTCCTCCCTCTCTGAGACAACGGTGCCACTGAGACTGCGTGAGATGCGAACAGTGAAGCACAAATaGAGAAGCAACAGGCATTAT +
Preference number: 4 (lower is better)
Translates to: GASSLSETTVPLRLREMRTVKHK*RSNRHY
Trigger: ATAATGCCTGTTGCTTCTTCATTTGTGCTTCACTGT...TCGCATCTCACGCAGTCTCAGTGGCACCGTTGTCTCAGAGAGGGAGGAAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR TCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGACAGGATCAGGACAGTaGAGCACAAATGAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELTGSGQ*STNEEA
Trigger: TGCTTCTTCATTTGTGCTTCACTGTCCTGATCCTGT...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGAATCACAGAACCTTGTaGTATTCACCCAGGAATCCA +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPNHRTL*YSPRNP
Trigger: TGGATTCCTGGGTGAATATCACAAGGTTCTGTGATT...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTCAGAGACTCCAATTCTaGGGTCTCCTGCTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFQRLQF*GLLLCV
Trigger: GACACAGAGCAGGAGACCTCAGAATTGGAGTCTCTG...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGACCAGGATCATGGGCTaGGTGCAACCTCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWTRIMG*VQPPPH
Trigger: ATGGGGAGGAGGTTGCACTCAGCCCATGATCCTGGT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTACCAGGATCATGGGCTaGGTGCAACCTCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVTRIMG*VQPPPH
Trigger: ATGGGGAGGAGGTTGCACTCAGCCCATGATCCTGGT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGGGTGGGTACACAGGATaGACAATGGGAGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKGGYTG*TMGGWE
Trigger: CTCCCACCCTCCCATTGTTCATCCTGTGTACCCACC...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGATGGTCTCAATCTCCTaGCCTCGTGATCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKMVSIS*PRDPPA
Trigger: GGCGGGTGGATCACGAGGTCAGGAGATTGAGACCAT...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGCACAACCATGGCAGTaGTGCAGGGTACCAACGCTG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWAQPWQ*CRVPTL
Trigger: CAGCGTTGGTACCCTGCATCACTGCCATGGTTGTGC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGGGCACAGGGAATGCTaGCAGGCCATAATACCTGGG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVGHREC*QAIIPG
Trigger: CCCAGGTATTATGGCCTGTCAGCATTCCCTGTGCCC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGGGCACAGGGAATGCTaGCAGGCCATAATACCTGGG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWGHREC*QAIIPG
Trigger: CCCAGGTATTATGGCCTGTCAGCATTCCCTGTGCCC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGCAGATCCCCCATGGTaGTGGCATTCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWADPPW*WHSAAA
Trigger: AGCTGCTGCAGAATGCCAGCACCATGGGGGATCTGC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGAAGTACAGTTCAGATTaGTTGGCCCGGTCATCCGTC +
Preference number: 4 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRKYSSD*LARSSV
Trigger: GACGGATGACCGGGCCAAGCAATCTGAACTGTACTT...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR GCA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGTGTCGTAGCATGTCCTaGTGTATGACTGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKCRSMS*CMTGTQ
Trigger: CTGAGTTCCAGTCATACAGCAGGACATGCTACGACA...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR GCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCTGTCGTAGCATGTCCTaGTGTATGACTGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFCRSMS*CMTGTQ
Trigger: CTGAGTTCCAGTCATACAGCAGGACATGCTACGACA...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
CDS-3UTR GCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGCTCCTCCTCTGCCCCTaGAGTGAGAGCCTACATTGG +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGLLLCP*SESLHW
Trigger: CCAATGTAGGCTCTCACTGCAGGGGCAGAGGAGGAG...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCTCCTCCTCTGCCCCTaGAGTGAGAGCCTACATTGG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWLLLCP*SESLHW
Trigger: CCAATGTAGGCTCTCACTGCAGGGGCAGAGGAGGAG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGATGTGGGACGATACTTaGTGGAAGAACTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLMWDDT*WKNWIL
Trigger: CAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACAT...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCCAGCCACCCATGGATaGTGTGGAGTCTACCTCCAG +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCPATHG*CGVYLQ
Trigger: CTGGAGGTAGACTCCACAGCATCCATGGGTGGCTGG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCCAGCCACCCATGGATaGTGTGGAGTCTACCTCCAG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWPATHG*CGVYLQ
Trigger: CTGGAGGTAGACTCCACAGCATCCATGGGTGGCTGG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGCTGGCCACCTCTTCCTaGAATTCATCCAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKLATSS*NSSSSL
Trigger: AAGTGAACTGGATGAATTGCAGGAAGAGGTGGCCAG...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGGGCTCTGCTGTGCGTaGTACAGCTGGCACCATGCA +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPGLCCA*YSWHHA
Trigger: TGCATGGTGCCAGCTGTAGCACGCACAGCAGAGCCC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGATTGCTGCTGCTGCATaGGATCCTGCAGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWIAAAA*DPAGSV
Trigger: CACGGAGCCTGCAGGATCGCATGCAGCAGCAGCAAT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACACCTTGCCTGTGGAATaGAGAGGGTTCAATGTTGTC +
Preference number: 4 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNTLPVE*RGFNVV
Trigger: GACAACATTGAACCCTCTGCATTCCACAGGCAAGGT...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCACCTTGCCTGTGGAATaGAGAGGGTTCAATGTTGTC +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFTLPVE*RGFNVV
Trigger: GACAACATTGAACCCTCTGCATTCCACAGGCAAGGT...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTCTTGTGGAGGGAGCTTaGTGCAACTGCTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFLVEGA*CNCCCH
Trigger: GTGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAG...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGGCTGTTCTTGAGCAATaGCTCTTCCTTCTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKAVLEQ*LFLLVE
Trigger: CTCCACAAGAAGGAAGAGGCATTGCTCAAGAACAGC...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTAGCTGTTCTTGAGCAATaGCTCTTCCTTCTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVAVLEQ*LFLLVE
Trigger: CTCCACAAGAAGGAAGAGGCATTGCTCAAGAACAGC...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTCTCATGGAGACACCCTaGATCCTCTGGAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: VSTAAQILRPNISHLGQLLMETP*ILWNCS
Trigger: TGAGCAGTTCCAGAGGATGCAGGGTGTCTCCATGAG...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGAGAGGATTGTTGCTTTaGCCATGGCCAGTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRRGLLL*PWPVAF
Trigger: AAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCT...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGCAGGCGGTATCCTGCTaGCCCCATCCAGAACAGCCA +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWQAVSC*PHPEQP
Trigger: TGGCTGTTCTGGATGGGGGCAGCAGGATACCGCCTG...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGTTTGGCTAAGTGGGTaGCAGGCGGTATCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWVWLSG*QAVSCC
Trigger: GCAGCAGGATACCGCCTGGCACCCACTTAGCCAAAC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTTGGCTAAGTGGGTaGCAGGCGGTATCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVVWLSG*QAVSCC
Trigger: GCAGCAGGATACCGCCTGGCACCCACTTAGCCAAAC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTCTATTGGGCTCCCCTaGCATGGTGGGCATCAGGAC +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVSIGLP*HGGHQD
Trigger: GTCCTGATGCCCACCATGGCAGGGGAGCCCAATAGA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR GCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTCTATTGGGCTCCCCTaGCATGGTGGGCATCAGGAC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWSIGLP*HGGHQD
Trigger: GTCCTGATGCCCACCATGGCAGGGGAGCCCAATAGA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR GCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTAAGTGGGAGGCATAACTaGTTTGCCTCCAGTCATCAT +
Preference number: 4 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVSGRHN*FASSHH
Trigger: ATGATGACTGGAGGCAAAGCAGTTATGCCTCCCACT...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGAGTGGGAGGCATAACTaGTTTGCCTCCAGTCATCAT +
Preference number: 4 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKSGRHN*FASSHH
Trigger: ATGATGACTGGAGGCAAAGCAGTTATGCCTCCCACT...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGGCAGGGTACCAACGCTaGCACAGTAGTTTATTTTGT +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAEAGYQR*HSSLFC
Trigger: ACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGC...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTCTTAACCGCCGCGGCTaGTATAGCTACAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVLNRRG*YSYREP
Trigger: TGGCTCCCTGTAGCTATAGCAGCCGCGGCGGTTAAG...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGATCCCCCATGGTGCTaGCATTCTGCAGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWDPPWC*HSAAAH
Trigger: GTGAGCTGCTGCAGAATGCCAGCACCATGGGGGATC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGGATCCCCCATGGTGCTaGCATTCTGCAGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGDPPWC*HSAAAH
Trigger: GTGAGCTGCTGCAGAATGCCAGCACCATGGGGGATC...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTCCGCAGATCCCCCATaGTGCTGGCATTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVSADPP*CWHSAA
Trigger: TGCTGCAGAATGCCAGCACCATGGGGGATCTGCGGA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGACAGTTCAGATTGCTTaGCCCGGTCATCCGTCACTC +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWTVQIA*PGHPSL
Trigger: GAGTGACGGATGACCGGGCCAAGCAATCTGAACTGT...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTACAGTTCAGATTGCTTaGCCCGGTCATCCGTCACTC +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFTVQIA*PGHPSL
Trigger: GAGTGACGGATGACCGGGCCAAGCAATCTGAACTGT...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGTCCTGGGTGGAAACTaGGGTACCCTGGGGATCTGC +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPVLGGN*GTLGIC
Trigger: GCAGATCCCCAGGGTACCCCAGTTTCCACCCAGGAC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGACTGGAACTCAGCTTaGGGAGGCAGGTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWDWNSA*GGRSWV
Trigger: CACCCAGGACCTGCCTCCCCAAGCTGAGTTCCAGTC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGTTTCTCCTTCACTGTaGTATCCCGAGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWVSPSL*YPEAWG
Trigger: GCCCCAGGCCTCGGGATACCACAGTGAAGGAGAAAC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGTTTCTCCTTCACTGTaGTATCCCGAGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCVSPSL*YPEAWG
Trigger: GCCCCAGGCCTCGGGATACCACAGTGAAGGAGAAAC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGAGGGATGGTCTGTTATaGATCATATTGCTGACTGTC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPRDGLL*IILLTV
Trigger: GACAGTCAGCAATATGATCCATAACAGACCATCCCT...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGAGTGAGAGCCTACATTaGTCTGAGAAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRSESLH*SEKPGM
Trigger: CATCCCTGGCTTCTCAGACCAATGTAGGCTCTCACT...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTGGGACGATACTTGCTaGAAGAACTGGATTTTGACT +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPWDDTC*KNWILT
Trigger: AGTCAAAATCCAGTTCTTCCAGCAAGTATCGTCCCA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACTCAGAGATTCTCGTTTaGGTCTCCATGTGGGACGAT +
Preference number: 4 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNSEILV*VSMWDD
Trigger: ATCGTCCCACATGGAGACCCAAACGAGAATCTCTGA...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTTCAGAGATTCTCGTTTaGGTCTCCATGTGGGACGAT +
Preference number: 4 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPSEILV*VSMWDD
Trigger: ATCGTCCCACATGGAGACCCAAACGAGAATCTCTGA...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTTGTACTGGGGGCTTaGTCCACCAAATTTAATGTC +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAELVLGA*STKFNV
Trigger: GACATTAAATTTGGTGGACCAAGCCCCCAGTACAAG...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGCCCCAGCGCTTGTACTaGGGGCTTGGTCCACCAAAT +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKPQRLY*GLGPPN
Trigger: ATTTGGTGGACCAAGCCCCCAGTACAAGCGCTGGGG...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTACTGCTGTGCGACTTTaGGATATGACGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFTAVRL*DMTPGR
Trigger: CCTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGT...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGACTGCTGTGCGACTTTaGGATATGACGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWTAVRL*DMTPGR
Trigger: CCTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGT...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGTGGCTTAACAATACTTaGAGCGGGATAGGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELWLNNT*SGIGCS
Trigger: TGAACAGCCTATCCCGCTCCAAGTATTGTTAAGCCA...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCTCCAGTTGGGCCTCTTaGCTTAACAATACTTGGAGC +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFSSWAS*LNNTWS
Trigger: GCTCCAAGTATTGTTAAGCCAAGAGGCCCAACTGGA...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTCAAGGCAGATCTACTaGGGGAGCTGTGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVSRQIY*GSCAVG
Trigger: CCCCACAGCACAGCTCCCCCAGTAGATCTGCCTTGA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTCAAGGCAGATCTACTaGGGGAGCTGTGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWSRQIY*GSCAVG
Trigger: CCCCACAGCACAGCTCCCCCAGTAGATCTGCCTTGA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCTTGCAGCTTACCCTCTaGGGCATCCAATGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: ISAVEVFERPGSWAECNLLQLTL*GIQWLP
Trigger: TGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAA...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTTTGCAGCTTACCCTCTaGGGCATCCAATGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SWPRCPMLKLRITEPCDILQLTL*GIQWLP
Trigger: TGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAA...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGTTGAGGCTTTGGCCTTaGAGGCATTGGTTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKLRLWP*RHWLVF
Trigger: GAAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAA...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGCAAGCCCCTTTGTGCTaGGAAACTCTGGCCTATAGG +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWQAPLC*ETLAYR
Trigger: CCTATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTG...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGCTAACATCTCTCACTTaGGACAGCTTCTCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLLTSLT*DSFSWY
Trigger: ATACCAAGAGAAGCTGTCCCAAGTGAGAGATGTTAG...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GGAGCTTCCTCCCTCTCTGAGACAACGGTGCCACTGAGACTGCGTGAGATGCGAGTCTTGGTTCCAATGTaGATGCAAAAGGATGTGATT +
Preference number: 4 (lower is better)
Translates to: GASSLSETTVPLRLREMRVLVPM*MQKDVI
Trigger: AATCACATCCTTTTGCATCCACATTGGAACCAAGAC...TCGCATCTCACGCAGTCTCAGTGGCACCGTTGTCTCAGAGAGGGAGGAAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR CCA 90 bp TGCCCGGTTTCCAAAGGCTTCCTCACGTTTGATGAATCAAAACTGTGGGAAGAAGCCTGTTTGGCTAAGTaGGTGCCAGGCGGTATCCTG +
Preference number: 4 (lower is better)
Translates to: CPVSKGFLTFDESKLWEEACLAK*VPGGIL
Trigger: CAGGATACCGCCTGGCACCCACTTAGCCAAACAGGC...TTCTTCCCACAGTTTTGATTCATCAAACGTGAGGAAGCCTTTGGAAACCGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGCCTGTTTGGCTAAGTaGGTGCCAGGCGGTATCCTG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVACLAK*VPGGIL
Trigger: CAGGATACCGCCTGGCACCCACTTAGCCAAACAGGC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGTCTGCAGAGCCTGTTTaGCTAAGTGGGTGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGSAEPV*LSGCQA
Trigger: CGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTCTGCAGAGCCTGTTTaGCTAAGTGGGTGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCSAEPV*LSGCQA
Trigger: CGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCGAGAGACCAGGATCATaGGCTGAGTGCAACCTCCTC +
Preference number: 4 (lower is better)
Translates to: ISAVEVFERPGSWAECNLERPGS*AECNLL
Trigger: GAGGAGGTTGCACTCAGCCCATGATCCTGGTCTCTC...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGAAGTACGCACTGTTCTaGCTTCATGGAGACCATGCT +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKKYALF*LHGDHA
Trigger: AGCATGGTCTCCATGAAGCCAGAACAGTGCGTACTT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGATAGCCAGAAACTGCTaGACACTCCTTGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAEIARNC*TLLEVP
Trigger: AGGAACTTCAAGGAGTGTCCAGCAGTTTCTGGCTAT...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTAGGAGTTGTCTGTTCTaGAGCGATGGGGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SWPRCPMLKLRITEPCDIRSCLF*SDGGGS
Trigger: AGAGCCTCCCCCATCGCTCCAGAACAGACAACTCCT...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCTTCTTTCTGGTAGTGTaGCAGTGTAGGTTAGTTGAG +
Preference number: 4 (lower is better)
Translates to: WNCSARERTSPFVLGNSGFFLVV*QCRLVE
Trigger: CTCAACTAACCTACACTGCCACACTACCAGAAAGAA...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGGATTTGTGCCTTTTTaGCAGGAATTTCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPGFVPF*QEFLSA
Trigger: AGCAGACAGAAATTCCTGCCAAAAAGGCACAAATCC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
3UTR CAA 72 bp TTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTaGAAGGACTACAGCCTAGGCTGTGTTCATCACCCC +
Preference number: 4 (lower is better)
Translates to: FYTGEGWAELMN*KDYSLGCVHHP
Trigger: GGGGTGATGAACACAGCCTAGGCTGTAGTCCTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
3UTR CAA 72 bp TGTTCTCCTGTGTCCAGAGTGGGAGGCATAACTGCTTaGCCTCCAGTCATCATCTGGGGGCATATCTACTCT +
Preference number: 4 (lower is better)
Translates to: CSPVSRVGGITA*PPVIIWGHIYS
Trigger: AGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAAGCAGTTATGCCTCCCACTCTGGACACAGGAGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGTCTCCCATGCACTTGTaGGTTGTAAGCTGCCTAAAG +
Preference number: 4 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRSPMHL*VVSCLK
Trigger: CTTTAGGCAGCTTACAACTCACAAGTGCATGGGAGA...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGACACACGGCGAATCCTaGTCCTCTCTCCACAGTTGC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWTHGES*SSLHSC
Trigger: GCAACTGTGGAGAGAGGATCAGGATTCGCCGTGTGT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGGAGGGCTCCCTCCCTaGATCTTCACTGTCGTAGCA +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPGGLPP*IFTVVA
Trigger: TGCTACGACAGTGAAGATTCAGGGAGGGAGCCCTCC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGTTCGAGTGTCACTTaGGATGGAGGGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPCSSVT*DGGLPP
Trigger: GGGAGGGAGCCCTCCATCTCAAGTGACACTCGAACA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTGAGCCTACATTGGTCTaGGAAGCCAGGGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISEPTLV*EARDGL
Trigger: CAGACCATCCCTGGCTTCTCAGACCAATGTAGGCTC...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGAGCCTACATTGGTCTaGGAAGCCAGGGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVEPTLV*EARDGL
Trigger: CAGACCATCCCTGGCTTCTCAGACCAATGTAGGCTC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGAGCCTACATTGGTCTaGGAAGCCAGGGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWEPTLV*EARDGL
Trigger: CAGACCATCCCTGGCTTCTCAGACCAATGTAGGCTC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGAGCTTCCTCCCTCTCTGAGACAACGGTGCCACTGAGACTGCGTGAGATGCGATATAAATTCTTTAGCTaGATCCTCAGAAAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GASSLSETTVPLRLREMRYKFFS*ILRKGA
Trigger: AGCCCCTTTTCTGAGGATTCAGCTAAAGAATTTATA...TCGCATCTCACGCAGTCTCAGTGGCACCGTTGTCTCAGAGAGGGAGGAAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGATCCCTGTAGACATTTaGGCTCTCAGGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWIPVDI*ALRQGC
Trigger: GCAGCCCTGCCTGAGAGCTCAAATGTCTACAGGGAT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTATCCCTGTAGACATTTaGGCTCTCAGGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCIPVDI*ALRQGC
Trigger: GCAGCCCTGCCTGAGAGCTCAAATGTCTACAGGGAT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTAGGAACCAACCCAGCTaGTCTCTTAGCACTTGGATC +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFRNQPS*SLSTWI
Trigger: GATCCAAGTGCTAAGAGATCAGCTGGGTTGGTTCCT...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCCGTCACTCCTCCCCTaGTTCTGCAGTTCATCCAAG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWPSLLP*FCSSSK
Trigger: CTTGGATGAACTGCAGAATCAGGGGAGGAGTGACGG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGGTGCTTTTCGAATACTaGTTTGCAACTTCTTATCGA +
Preference number: 4 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLVLFEY*FATSYR
Trigger: TCGATAAGAAGTTGCAAATCAGTATTCGAAAAGCAC...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS-3UTR TCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTGTTGGGAGGCAGGCTaGGGGCTGCGACGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGCWEAG*GLRRLL
Trigger: CAGCAGCCGTCGCAGCCCTCAGCCTGCCTCCCAACA...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTGTTCACTTGTTGGCTaGGAGAGAGTCCCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCCSLVG*ERVPAC
Trigger: ACAGGCGGGGACTCTCTCTCAGCCAACAAGTGAACA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGACAGGATCAGGACAGTaGAGCACAAATGAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKTGSGQ*STNEEA
Trigger: TGCTTCTTCATTTGTGCTTCACTGTCCTGATCCTGT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCACAAACTTCTATCCTTaGAACCTGTACTATCCCTCA +
Preference number: 4 (lower is better)
Translates to: WNCSARERTSPFVLGNSGTNFYP*NLYYPS
Trigger: TGAGGGATAGTACAGGTTTCAAGGATAGAAGTTTGT...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCAGTGGCCTTTCTCTTaGCCCTGTGAGAAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCQWPFS*PCEKGG
Trigger: GCCTCCTTTCTCACAGGGTCAAGAGAAAGGCCACTG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGCAGTGGCCTTTCTCTTaGCCCTGTGAGAAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGQWPFS*PCEKGG
Trigger: GCCTCCTTTCTCACAGGGTCAAGAGAAAGGCCACTG...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCAGTGGCCTTTCTCTTaGCCCTGTGAGAAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWQWPFS*PCEKGG
Trigger: GCCTCCTTTCTCACAGGGTCAAGAGAAAGGCCACTG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGGCCCCATGCTTAAGCTaGGAATCACAGAACCTTGTG +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWAPCLS*ESQNLV
Trigger: CACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGC...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAACCAGGATCATGGGCTaGGTGCAACCTCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPTRIMG*VQPPPH
Trigger: ATGGGGAGGAGGTTGCACTCAGCCCATGATCCTGGT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGGTGGGTACACAGGATaGACAATGGGAGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWGGYTG*TMGGWE
Trigger: CTCCCACCCTCCCATTGTTCATCCTGTGTACCCACC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGACCTCAGGGGTACATaGAGACTGCTAGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVDLRGT*RLLDGG
Trigger: CCCACCATCTAGCAGTCTTCATGTACCCCTGAGGTC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTGACCTCAGGGGTACATaGAGACTGCTAGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISDLRGT*RLLDGG
Trigger: CCCACCATCTAGCAGTCTTCATGTACCCCTGAGGTC...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGATGGTCTCAATCTCCTaGCCTCGTGATCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWMVSIS*PRDPPA
Trigger: GGCGGGTGGATCACGAGGTCAGGAGATTGAGACCAT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGCACAACCATGGCAGTaGTGCAGGGTACCAACGCTG +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPAQPWQ*CRVPTL
Trigger: CAGCGTTGGTACCCTGCATCACTGCCATGGTTGTGC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGCCACCAATTCTATGTTaGGATGAGAATAGCACAACC +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKPPILC*DENSTT
Trigger: GGTTGTGCTATTCTCATCTCAACATAGAATTGGTGG...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGGTTTACATTGACGACTaGGCAAGTGGCAATAATGGC +
Preference number: 4 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKVYIDD*ASGNNG
Trigger: GCCATTATTGCCACTTGCTCAGTCGTCAATGTAAAC...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACGTTTACATTGACGACTaGGCAAGTGGCAATAATGGC +
Preference number: 4 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNVYIDD*ASGNNG
Trigger: GCCATTATTGCCACTTGCTCAGTCGTCAATGTAAAC...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGCAAAAACTCAAATTCTaGGCAACTGCAAAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRQKLKF*ATAKGS
Trigger: GGAACCTTTTGCAGTTGCTCAGAATTTGAGTTTTTG...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS-3UTR GCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGATTTCTGATGGGAAATaGAGTGTTGGGCAGTACATA +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRISDGK*SVGQYI
Trigger: TATGTACTGCCCAACACTGCATTTCCCATCAGAAAT...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000680396.1
CDS-3UTR GCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGGTCCTGTGTCCCGACTaGTCTGAGACATGGAATCAT +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWVLCPD*SETWNH
Trigger: ATGATTCCATGTCTCAGAGCAGTCGGGACACAGGAC...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR GCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGATGTGGGACGATACTTaGTGGAAGAACTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKMWDDT*WKNWIL
Trigger: CAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACAT...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTAGTCTACCTCCAGGATaGTACTGCTGTGCGACTTTG +
Preference number: 4 (lower is better)
Translates to: VSTAAQILRPNISHLGQLSLPPG*YCCATL
Trigger: CAAAGTCGCACAGCAGTAGCATCCTGGAGGTAGACT...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTAGTCTACCTCCAGGATaGTACTGCTGTGCGACTTTG +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFSLPPG*YCCATL
Trigger: CAAAGTCGCACAGCAGTAGCATCCTGGAGGTAGACT...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTACTGACTCTGCCTCTTaGAGGGACCTCTCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVTDSAS*RDLSKP
Trigger: CGGCTTTGAGAGGTCCCTGCAAGAGGCAGAGTCAGT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGACAGAGAGCCAAAGCTaGAGCACAGTCTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWTESQS*STVSFL
Trigger: CAGAAAGGAGACTGTGCTGCAGCTTTGGCTCTCTGT...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTATCGACTAGGGCTCTaGTGTGCGTGCTACAGCTGG +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCYRLGL*CACYSW
Trigger: CCAGCTGTAGCACGCACAGCAGAGCCCTAGTCGATA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTATCGACTAGGGCTCTaGTGTGCGTGCTACAGCTGG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVYRLGL*CACYSW
Trigger: CCAGCTGTAGCACGCACAGCAGAGCCCTAGTCGATA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGATCCTGCAGGCTCCGTaGTTTTCGAATACTGATTTG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKILQAP*FSNTDL
Trigger: CAAATCAGTATTCGAAAAGCACGGAGCCTGCAGGAT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGAGGCAGGCTGAGGGCTaGGACGGCTGCTGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGRQAEG*DGCCGD
Trigger: ATCACCACAGCAGCCGTCGCAGCCCTCAGCCTGCCT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTTCACACCTAGAGCCTTaGAGCTTACCCTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISSHLEP*SLPSGA
Trigger: TGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGA...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGGTATATGTCTGGCTCTaGCAACCTGGGCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGVYVWL*QPGLSS
Trigger: GGAGGACAGCCCAGGTTGGCAGAGCCAGACATATAC...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTATATGTCTGGCTCTaGCAACCTGGGCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVVYVWL*QPGLSS
Trigger: GGAGGACAGCCCAGGTTGGCAGAGCCAGACATATAC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCAATTCTGAGGTCTCCTaGTCTGTGTCTTGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFNSEVS*SVSWFQ
Trigger: TTGGAACCAAGACACAGAGCAGGAGACCTCAGAATT...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGTTTGGCTAAGTGGGTaGCAGGCGGTATCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPVWLSG*QAVSCC
Trigger: GCAGCAGGATACCGCCTGGCACCCACTTAGCCAAAC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTGAGCTGGAACAACGGTaGCCGGTTTCCAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISELEQR*PVSKGF
Trigger: GAAGCCTTTGGAAACCGGGCACCGTTGTTCCAGCTC...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGGCAGGGTACCAACGCTaGCACAGTAGTTTATTTTGT +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKAGYQR*HSSLFC
Trigger: ACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGC...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGAAGGCTGTGTTAGTGTaGCTGACTCCATCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKKAVLV*LTPSVQ
Trigger: TTGAACAGATGGAGTCAGGCACACTAACACAGCCTT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGAAACGTTGTTCATCCTaGAAAGTCTTTGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELKRCSS*KVFARA
Trigger: TGCTCTGGCAAAGACTTTCCAGGATGAACAACGTTT...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000680396.1
CDS-3UTR CCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTTCCATAATTCCCAGCTaGAAACGTTGTTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPSIIPS*KRCSSW
Trigger: CCAGGATGAACAACGTTTCCAGCTGGGAATTATGGA...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGATTGCAAAGGGAAGTaGTGGAGATATAATGTACCA +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPDCKGK*WRYNVP
Trigger: TGGTACATTATATCTCCACCACTTCCCTTTGCAATC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGCTCTCCACAGTTGCTTaGACAGTTCCGCAGATCCCC +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKLSTVA*TVPQIP
Trigger: GGGGATCTGCGGAACTGTCCAAGCAACTGTGGAGAG...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCTCTCCACAGTTGCTTaGACAGTTCCGCAGATCCCC +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCLSTVA*TVPQIP
Trigger: GGGGATCTGCGGAACTGTCCAAGCAACTGTGGAGAG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGAATCGTGATAATCTGTaGAGCATTCATCAACACACG +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPNRDNL*SIHQHT
Trigger: CGTGTGTTGATGAATGCTCCACAGATTATCACGATT...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTGGGGAGGCAGGTCCTaGGTGGAAACTGGGGTACCC +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGWGGRS*VETGVP
Trigger: GGGTACCCCAGTTTCCACCCAGGACCTGCCTCCCCA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGTTTCTCCTTCACTGTaGTATCCCGAGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPVSPSL*YPEAWG
Trigger: GCCCCAGGCCTCGGGATACCACAGTGAAGGAGAAAC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTGTTGGTGCTGCTGGATaGTTTGGAGGCATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFVGAAG*FGGISR
Trigger: CCTAGAAATGCCTCCAAACCATCCAGCAGCACCAAC...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCGCCTGTTGGTGCTGCTaGATGGTTTGGAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: ISAVEVFERPGSWAECNLACWCC*MVWRHF
Trigger: GAAATGCCTCCAAACCATCCAGCAGCACCAACAGGC...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGAGGGATGGTCTGTTATaGATCATATTGCTGACTGTC +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKRDGLL*IILLTV
Trigger: GACAGTCAGCAATATGATCCATAACAGACCATCCCT...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGATTTTGACTCACTGCTaGTACTCTCTATTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRILTHC*YSLFPS
Trigger: ACTGGGAAATAGAGAGTACCAGCAGTGAGTCAAAAT...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGTGGGACGATACTTGCTaGAAGAACTGGATTTTGACT +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKWDDTC*KNWILT
Trigger: AGTCAAAATCCAGTTCTTCCAGCAAGTATCGTCCCA...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTGTTTGGGTCTCCATGTaGGACGATACTTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VSTAAQILRPNISHLGQLVWVSM*DDTCWK
Trigger: CTTCCAGCAAGTATCGTCCCACATGGAGACCCAAAC...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCAGAAGGTGGCTTGCTTaGTTCATCTGGTATAAATTC +
Preference number: 4 (lower is better)
Translates to: WNCSARERTSPFVLGNSGRRWLA*FIWYKF
Trigger: GAATTTATACCAGATGAACCAAGCAAGCCACCTTCT...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACAATGTCGTAAGAAGGTaGCTTGCTTGGTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNNVVRR*LAWFIW
Trigger: CCAGATGAACCAAGCAAGCCACCTTCTTACGACATT...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCACCCCAGCGCTTGTACTaGGGGCTTGGTCCACCAAAT +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPPQRLY*GLGPPN
Trigger: ATTTGGTGGACCAAGCCCCCAGTACAAGCGCTGGGG...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCCAGATTCCATTCGCTaGATTAGTCGGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWPDSIR*ISRGCC
Trigger: GCAGCACCCCCGACTAATCCAGCGAATGGAATCTGG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTCCAGATTCCATTCGCTaGATTAGTCGGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISPDSIR*ISRGCC
Trigger: GCAGCACCCCCGACTAATCCAGCGAATGGAATCTGG...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTCCAGATTCCATTCGCTaGATTAGTCGGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVPDSIR*ISRGCC
Trigger: GCAGCACCCCCGACTAATCCAGCGAATGGAATCTGG...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGTGTGCGTGCTACAGCTaGCACCATGCAGGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWCACYS*HHAGQV
Trigger: GACTTGCCCTGCATGGTGCCAGCTGTAGCACGCACA...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGAGGCTGTTCACTTGTTaGCTGAGAGAGAGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWRLFTC*LRESPR
Trigger: GCGGGGACTCTCTCTCAGCCAACAAGTGAACAGCCT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGTGGCTTAACAATACTTaGAGCGGGATAGGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKWLNNT*SGIGCS
Trigger: TGAACAGCCTATCCCGCTCCAAGTATTGTTAAGCCA...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTGATGAGTGTGACTCATaGCAGGAAGCAGGTGAATGG +
Preference number: 4 (lower is better)
Translates to: VSTAAQILRPNISHLGQLDECDS*QEAGEW
Trigger: CCATTCACCTGCTTCCTGCCATGAGTCACACTCATC...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTTGCAGCTTACCCTCTaGGGCATCCAATGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWLQLTL*GIQWLP
Trigger: TGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTTGCAGCTTACCCTCTaGGGCATCCAATGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVLQLTL*GIQWLP
Trigger: TGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTTGCAGCTTACCCTCTaGGGCATCCAATGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCLQLTL*GIQWLP
Trigger: TGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTAAAGCAACAGGCATTATaGGGTGGCAGGTTCTATACA +
Preference number: 4 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVKQQAL*GGRFYT
Trigger: TGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTAGAAGTTTTGAGGCTTTaGCCTTGGAGGCATTGGTTA +
Preference number: 4 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVEVLRL*PWRHWL
Trigger: TAACCAATGCCTCCAAGGCCAAAGCCTCAAAACTTC...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGGAAGTTTTGAGGCTTTaGCCTTGGAGGCATTGGTTA +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKEVLRL*PWRHWL
Trigger: TAACCAATGCCTCCAAGGCCAAAGCCTCAAAACTTC...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTCTCTTCCCAGGAAAGTaGTCTATCCCCACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVLFPGK*SIPTLQ
Trigger: CTGGAGGGTGGGGATAGACCACTTTCCTGGGAAGAG...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTCTCTTCCCAGGAAAGTaGTCTATCCCCACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISLFPGK*SIPTLQ
Trigger: CTGGAGGGTGGGGATAGACCACTTTCCTGGGAAGAG...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCTCTTCCCAGGAAAGTaGTCTATCCCCACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCLFPGK*SIPTLQ
Trigger: CTGGAGGGTGGGGATAGACCACTTTCCTGGGAAGAG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTGAGAAGAATGTTCAGTaGACTCTTCCCAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPEKNVQ*TLPRKV
Trigger: CACTTTCCTGGGAAGAGTCCACTGAACATTCTTCTC...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCGATGTGATTTCTCTCTaGATAGGTTACACACGTATG +
Preference number: 4 (lower is better)
Translates to: WNCSARERTSPFVLGNSGDVISL*IGYTRM
Trigger: CATACGTGTGTAACCTATCCAGAGAGAAATCACATC...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGGAGAGACCAGGATCATaGGCTGAGTGCAACCTCCTC +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKERPGS*AECNLL
Trigger: GAGGAGGTTGCACTCAGCCCATGATCCTGGTCTCTC...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGACTGTTCTGGCTTCATaGAGACCATGCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKTVLAS*RPCSIS
Trigger: AGAAATGGAGCATGGTCTCCATGAAGCCAGAACAGT...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGACTGTTCTGGCTTCATaGAGACCATGCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKTVLAS*RPCSIS
Trigger: AGAAATGGAGCATGGTCTCCATGAAGCCAGAACAGT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTTGGGGACAGGAACTGTaGTTGGGGAAGGTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: SWPRCPMLKLRITEPCDIWGQEL*LGKVEL
Trigger: CAACTCTACCTTCCCCAACCACAGTTCCTGTCCCCA...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTAGGAGTTGTCTGTTCTaGAGCGATGGGGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVRSCLF*SDGGGS
Trigger: AGAGCCTCCCCCATCGCTCCAGAACAGACAACTCCT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGTCCCAATATGCTGGTTaGTCTCTGACCAGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKSQYAG*SLTRVP
Trigger: GGGCACCCTGGTCAGAGACCAACCAGCATATTGGGA...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCGGGTGGGAGGGTGAATaGAAAAGATCACTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ISAVEVFERPGSWAECNLGWEGE*KRSLQD
Trigger: GTCCTGGAGTGATCTTTTCCATTCACCCTCCCACCC...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGAAGACTGCTAGATGGTaGGTACACAGGATGAACAAT +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKKTARW*VHRMNN
Trigger: ATTGTTCATCCTGTGTACCCACCATCTAGCAGTCTT...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGATGAAGACTGCTAGATaGTGGGTACACAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKMKTAR*WVHRMN
Trigger: GTTCATCCTGTGTACCCACCATCTAGCAGTCTTCAT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGGGCTCAGGTGGAGGTaGGGACATAAAGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPGLRWR*GHKASR
Trigger: CCTGGATGCTTTATGTCCCCACCTCCACCTGAGCCC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGACTACCACGACCCCCTaGAAAATAATTTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKTTTTP*KIISLP
Trigger: TGGAAGAGAAATTATTTTTCAGGGGGTCGTGGTAGT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTTCTCCCATGCACTTGTaGGTTGTAAGCTGCCTAAAG +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFSPMHL*VVSCLK
Trigger: CTTTAGGCAGCTTACAACTCACAAGTGCATGGGAGA...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000680396.1
CDS-3UTR TCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGTCAGCAATGTGGAAGTaGATTCTCATCAGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKSAMWK*ILIRRF
Trigger: AAACCTCCTGATGAGAATTCACTTCCACATTGCTGA...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGGTCATTGCAAATTTCTaGTGGGAAATGCAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKVIANF*WEMQCW
Trigger: CCAACACTGCATTTCCCATCAGAAATTTGCAATGAC...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGACACACGGCGAATCCTaGTCCTCTCTCCACAGTTGC +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWTHGES*SSLHSC
Trigger: GCAACTGTGGAGAGAGGATCAGGATTCGCCGTGTGT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGGGATAGCTCTCCGTTaGGGAATCTGTTCGAGTGTC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWGIALR*GICSSV
Trigger: GACACTCGAACAGATTCCTCAACGGAGAGCTATCCC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGGGGATAGCTCTCCGTTaGGGAATCTGTTCGAGTGTC +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGGIALR*GICSSV
Trigger: GACACTCGAACAGATTCCTCAACGGAGAGCTATCCC...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGGGATAGCTCTCCGTTaGGGAATCTGTTCGAGTGTC +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCGIALR*GICSSV
Trigger: GACACTCGAACAGATTCCTCAACGGAGAGCTATCCC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCAGAAGAGAAGTGACTaGCCACAGACTCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCQKRSD*PQTHGG
Trigger: CCCACCATGAGTCTGTGGTCAGTCACTTCTCTTCTG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCAGAAGAGAAGTGACTaGCCACAGACTCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWQKRSD*PQTHGG
Trigger: CCCACCATGAGTCTGTGGTCAGTCACTTCTCTTCTG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTTGGATGTGTGTTTCTaGTTACATTCACTATCAGTC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPLDVCF*LHSLSV
Trigger: GACTGATAGTGAATGTAATCAGAAACACACATCCAA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGAGCCTACATTGGTCTaGGAAGCCAGGGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPEPTLV*EARDGL
Trigger: CAGACCATCCCTGGCTTCTCAGACCAATGTAGGCTC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGTATAAATTCTTTAGCTaGATCCTCAGAAAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRYKFFS*ILRKGA
Trigger: AGCCCCTTTTCTGAGGATTCAGCTAAAGAATTTATA...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAATCCCTGTAGACATTTaGGCTCTCAGGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPIPVDI*ALRQGC
Trigger: GCAGCCCTGCCTGAGAGCTCAAATGTCTACAGGGAT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTAGGAACCAACCCAGCTaGTCTCTTAGCACTTGGATC +
Preference number: 4 (lower is better)
Translates to: SWPRCPMLKLRITEPCDIRNQPS*SLSTWI
Trigger: GATCCAAGTGCTAAGAGATCAGCTGGGTTGGTTCCT...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTGCGACTTTGGGATATaGCGCCAGGAAGGAACCAAC +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCCDFGI*RQEGTN
Trigger: GTTGGTTCCTTCCTGGCGTCATATCCCAAAGTCGCA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCATGAAGCGGCTAGGATaGGGGTTAAACCCTTTCGCT +
Preference number: 4 (lower is better)
Translates to: ISAVEVFERPGSWAECNLMKRLG*GLNPFA
Trigger: AGCGAAAGGGTTTAACCCTCATCCTAGCCGCTTCAT...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGTGCTTTTCGAATACTaGTTTGCAACTTCTTATCGA +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPVLFEY*FATSYR
Trigger: TCGATAAGAAGTTGCAAATCAGTATTCGAAAAGCAC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGTTCACTTGTTGGCTaGGAGAGAGTCCCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPCSLVG*ERVPAC
Trigger: ACAGGCGGGGACTCTCTCTCAGCCAACAAGTGAACA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGACAAACTTCTATCCTTaGAACCTGTACTATCCCTCA +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKTNFYP*NLYYPS
Trigger: TGAGGGATAGTACAGGTTTCAAGGATAGAAGTTTGT...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTAAATAACCTTTACCATTaGCTGTGCTGCAGGACTCTA +
Preference number: 4 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVNNLYH*LCCRTL
Trigger: TAGAGTCCTGCAGCACAGTCAATGGTAAAGGTTATT...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGAATCTCCTGACCTCGTaGTCCACCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGNLLTS*STRLSL
Trigger: GAGGCTGAGGCGGGTGGATCACGAGGTCAGGAGATT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGTCCATAAAGTCCTGGTaGAGTGGATGTAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKSIKSW*SGCNSQ
Trigger: TTGAGAATTACATCCACTTCACCAGGACTTTATGGA...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS-3UTR TCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGTCCTTCTATTTTTCTTaGACAGCCTCCATAAAGTCC +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELSFYFS*TASIKS
Trigger: GGACTTTATGGAGGCTGTTCAAGAAAAATAGAAGGA...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCCTCCTAGATCAAGATaGCAGAGCCCTCCCTCACTT +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWPPRSR*QSPPSL
Trigger: AAGTGAGGGAGGGCTCTGTCATCTTGATCTAGGAGG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGGCTGGTCTCCTCCTCTaGCCCTGCAGTGAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGAGLLL*PCSESL
Trigger: TAGGCTCTCACTGCAGGGGCAGAGGAGGAGACCAGC...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGTGAGAGCCTGGCCGTaGTGGGCCCCAGCGCTTGTA +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPVRAWP*WAPALV
Trigger: TACAAGCGCTGGGGCCCAGCACGGCCAGGCTCTCAC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGCTGGCCACCTCTTCCTaGAATTCATCCAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWLATSS*NSSSSL
Trigger: AAGTGAACTGGATGAATTGCAGGAAGAGGTGGCCAG...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGACTGACTCTGCCTCTTaGAGGGACCTCTCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWTDSAS*RDLSKP
Trigger: CGGCTTTGAGAGGTCCCTGCAAGAGGCAGAGTCAGT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTACCTTGCCTGTGGAATaGAGAGGGTTCAATGTTGTC +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFTLPVE*RGFNVV
Trigger: GACAACATTGAACCCTCTGCATTCCACAGGCAAGGT...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR GCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGGCTTTAGGTAAACCTTaGCTGTGGAATGCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWALGKP*LWNAEG
Trigger: ACCCTCTGCATTCCACAGGCAAGGTTTACCTAAAGC...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCTTGTGGAGGGAGCTTaGTGCAACTGCTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWLVEGA*CNCCCH
Trigger: GTGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCTTGTGGAGGGAGCTTaGTGCAACTGCTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCLVEGA*CNCCCH
Trigger: GTGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGGCTGTTCTTGAGCAATaGCTCTTCCTTCTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWAVLEQ*LFLLVE
Trigger: CTCCACAAGAAGGAAGAGGCATTGCTCAAGAACAGC...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGGGACAAGCCCCTTTGTaGTGGGAAACTCTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKGQAPL*WETLAY
Trigger: ATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCC...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCTCATGGAGACACCCTaGATCCTCTGGAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCLMETP*ILWNCS
Trigger: TGAGCAGTTCCAGAGGATGCAGGGTGTCTCCATGAG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTCTCATGGAGACACCCTaGATCCTCTGGAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISLMETP*ILWNCS
Trigger: TGAGCAGTTCCAGAGGATGCAGGGTGTCTCCATGAG...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTCCAGAGAGGATTGTTaGTTTGCCCATGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCSREDC*FAHGQW
Trigger: CCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTCCAGAGAGGATTGTTaGTTTGCCCATGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWSREDC*FAHGQW
Trigger: CCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGTCCAGAGAGGATTGTTaGTTTGCCCATGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKSREDC*FAHGQW
Trigger: CCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGA...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTGCCAGGCGGTATCCTaGTGCCCCCATCCAGAACAG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGCQAVS*CPHPEQ
Trigger: CTGTTCTGGATGGGGGCAGCAGGATACCGCCTGGCA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGCCTCCCCATGCCATCTaGAGAGCCTGTTTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWPPHAI*RACLAK
Trigger: CTTAGCCAAACAGGCTCTGCAGATGGCATGGGGAGG...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTTCTCTGCACTGTACTaGTCATCCTCCCCACACTCC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWFSALY*SSSPHS
Trigger: GGAGTGTGGGGAGGATGAGCAGTACAGTGCAGAGAA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339859.8
ENST00000466048.6
CDS-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGAGCTGGAACAACGGTaGCCGGTTTCCAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWELEQR*PVSKGF
Trigger: GAAGCCTTTGGAAACCGGGCACCGTTGTTCCAGCTC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR GCA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGCACATAGCCAGAAACTaGTGGACACTCCTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRHIARN*WTLLEV
Trigger: AACTTCAAGGAGTGTCCAGCAGTTTCTGGCTATGTG...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGAGTGGGAGGCATAACTaGTTTGCCTCCAGTCATCAT +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWSGRHN*FASSHH
Trigger: ATGATGACTGGAGGCAAAGCAGTTATGCCTCCCACT...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCACTTTGCTGGGGGCTATaGAGGTTGAGCTTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPLCWGL*RLSFEV
Trigger: CACCTCGAAGCTCAACCTCCATAGCCCCCAGCAAAG...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGCAGCTGTTTTGCCCTaGCTCATTGCTGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVAAVLP*LIAEAF
Trigger: AAAGGCCTCAGCAATGAGCCAGGGCAAAACAGCTGC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCAAACGTTGTTCATCCTaGAAAGTCTTTGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFKRCSS*KVFARA
Trigger: TGCTCTGGCAAAGACTTTCCAGGATGAACAACGTTT...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000680396.1
CDS-3UTR CCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGTCAGTGACCCTTTCTTaGATGTGTGTTTCTGATTAC +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAESVTLS*MCVSDY
Trigger: GTAATCAGAAACACACATCCAAGAAAGGGTCACTGA...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGCCTGTTGGTGCTGCTaGATGGTTTGGAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCACWCC*MVWRHF
Trigger: GAAATGCCTCCAAACCATCCAGCAGCACCAACAGGC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGCCTGTTGGTGCTGCTaGATGGTTTGGAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWACWCC*MVWRHF
Trigger: GAAATGCCTCCAAACCATCCAGCAGCACCAACAGGC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGCCTGTTGGTGCTGCTaGATGGTTTGGAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVACWCC*MVWRHF
Trigger: GAAATGCCTCCAAACCATCCAGCAGCACCAACAGGC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTAGGGATGGTCTGTTATaGATCATATTGCTGACTGTC +
Preference number: 4 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPRDGLL*IILLTV
Trigger: GACAGTCAGCAATATGATCCATAACAGACCATCCCT...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGAGGGATGGTCTGTTATaGATCATATTGCTGACTGTC +
Preference number: 4 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKRDGLL*IILLTV
Trigger: GACAGTCAGCAATATGATCCATAACAGACCATCCCT...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTAGTGAGAGCCTACATTaGTCTGAGAAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: SWPRCPMLKLRITEPCDISESLH*SEKPGM
Trigger: CATCCCTGGCTTCTCAGACCAATGTAGGCTCTCACT...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGATTTTGACTCACTGCTaGTACTCTCTATTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKILTHC*YSLFPS
Trigger: ACTGGGAAATAGAGAGTACCAGCAGTGAGTCAAAAT...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTATGGGACGATACTTGCTaGAAGAACTGGATTTTGACT +
Preference number: 4 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVWDDTC*KNWILT
Trigger: AGTCAAAATCCAGTTCTTCCAGCAAGTATCGTCCCA...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGAATGTCGTAAGAAGGTaGCTTGCTTGGTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRNVVRR*LAWFIW
Trigger: CCAGATGAACCAAGCAAGCCACCTTCTTACGACATT...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCACCAGATTCCATTCGCTaGATTAGTCGGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPPDSIR*ISRGCC
Trigger: GCAGCACCCCCGACTAATCCAGCGAATGGAATCTGG...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGCCAGATTCCATTCGCTaGATTAGTCGGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWPDSIR*ISRGCC
Trigger: GCAGCACCCCCGACTAATCCAGCGAATGGAATCTGG...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTACTGCTGTGCGACTTTaGGATATGACGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVTAVRL*DMTPGR
Trigger: CCTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCACACCCATGGATGCTGTaGAGTCTACCTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPHPWML*SLPPGC
Trigger: GCATCCTGGAGGTAGACTCCACAGCATCCATGGGTG...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTTGTCCAGCCACCCATaGATGCTGTGGAGTCTACCT +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCLSSHP*MLWSLP
Trigger: AGGTAGACTCCACAGCATCCATGGGTGGCTGGACAA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTTCCAGTTGGGCCTCTTaGCTTAACAATACTTGGAGC +
Preference number: 4 (lower is better)
Translates to: VSTAAQILRPNISHLGQLSSWAS*LNNTWS
Trigger: GCTCCAAGTATTGTTAAGCCAAGAGGCCCAACTGGA...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTATGCCGGATTCCAGTTaGGCCTCTTGGCTTAACAAT +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFMPDSS*ASWLNN
Trigger: ATTGTTAAGCCAAGAGGCCCAACTGGAATCCGGCAT...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGATGCCGGATTCCAGTTaGGCCTCTTGGCTTAACAAT +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWMPDSS*ASWLNN
Trigger: ATTGTTAAGCCAAGAGGCCCAACTGGAATCCGGCAT...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGGGTAAACCTTGCCTGTaGAATGCAGAGGGTTCAATG +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWGKPCL*NAEGSM
Trigger: CATTGAACCCTCTGCATTCCACAGGCAAGGTTTACC...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGCCTCTTCCTTCTTGTaGAGGGAGCTTGCTGCAACT +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWASSFL*RELAAT
Trigger: AGTTGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTGCCTCTTCCTTCTTGTaGAGGGAGCTTGCTGCAACT +
Preference number: 4 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISASSFL*RELAAT
Trigger: AGTTGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGC...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGCCTCTTCCTTCTTGTaGAGGGAGCTTGCTGCAACT +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVASSFL*RELAAT
Trigger: AGTTGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCACAGGCATTATGGGGTaGCAGGTTCTATACAGGGGA +
Preference number: 4 (lower is better)
Translates to: ISAVEVFERPGSWAECNLTGIMG*QVLYRG
Trigger: TCCCCTGTATAGAACCTGCCACCCCATAATGCCTGT...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTACAGGCATTATGGGGTaGCAGGTTCTATACAGGGGA +
Preference number: 4 (lower is better)
Translates to: SWPRCPMLKLRITEPCDITGIMG*QVLYRG
Trigger: TCCCCTGTATAGAACCTGCCACCCCATAATGCCTGT...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGCAAGCCCCTTTGTGCTaGGAAACTCTGGCCTATAGG +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKQAPLC*ETLAYR
Trigger: CCTATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTG...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGACACCCTGCATCCTCTaGAACTGCTCAGCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWTPCIL*NCSARE
Trigger: TTCTCTGGCTGAGCAGTTCCAGAGGATGCAGGGTGT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCTTGTTGCTTTGCCCATaGCCAGTGGCCTTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: ISAVEVFERPGSWAECNLLLLCP*PVAFLL
Trigger: CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAA...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTCTCTTGGTATATGTCTaGCTCTGCCAACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVLLVYV*LCQPGL
Trigger: CAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAG...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGGAGGACTTCATTCCTaGCCTAGGTGCCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPGGLHS*PRCPML
Trigger: AAGCATGGGGCACCTAGGCCAGGAATGAAGTCCTCC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGGTCTTGGTTCCAATGTaGATGCAAAAGGATGTGATT +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKVLVPM*MQKDVI
Trigger: AATCACATCCTTTTGCATCCACATTGGAACCAAGAC...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGAGAGACCAGGATCATaGGCTGAGTGCAACCTCCTC +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWERPGS*AECNLL
Trigger: GAGGAGGTTGCACTCAGCCCATGATCCTGGTCTCTC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GTTTCCAAAGGCTTCCTCACGTTTGATGAATCAAAACTGTGGGAAGAAACCGGAGAGAGACCAGGATCATaGGCTGAGTGCAACCTCCTC +
Preference number: 4 (lower is better)
Translates to: VSKGFLTFDESKLWEETGERPGS*AECNLL
Trigger: GAGGAGGTTGCACTCAGCCCATGATCCTGGTCTCTC...TCCGGTTTCTTCCCACAGTTTTGATTCATCAAACGTGAGGAAGCCTTTGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTGGGGACAGGAACTGTaGTTGGGGAAGGTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVWGQEL*LGKVEL
Trigger: CAACTCTACCTTCCCCAACCACAGTTCCTGTCCCCA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTGGGGACAGGAACTGTaGTTGGGGAAGGTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCWGQEL*LGKVEL
Trigger: CAACTCTACCTTCCCCAACCACAGTTCCTGTCCCCA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGGGCATCAGGACATCTaGGGACAGGAACTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPGHQDI*GQELWL
Trigger: CAACCACAGTTCCTGTCCCCAGATGTCCTGATGCCC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGGGCATCAGGACATCTaGGGACAGGAACTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWGHQDI*GQELWL
Trigger: CAACCACAGTTCCTGTCCCCAGATGTCCTGATGCCC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTGGGCTCCCCTGCCATaGTGGGCATCAGGACATCTG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGWAPLP*WASGHL
Trigger: CAGATGTCCTGATGCCCACCATGGCAGGGGAGCCCA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTTCCTTCCTGTGTACTTaGCCCCTTGGGAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: SWPRCPMLKLRITEPCDISFLCT*PLGKFH
Trigger: GTGAAACTTCCCAAGGGGCCAAGTACACAGGAAGGA...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAAGGAGTTGTCTGTTCTaGAGCGATGGGGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPRSCLF*SDGGGS
Trigger: AGAGCCTCCCCCATCGCTCCAGAACAGACAACTCCT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGTCCCAATATGCTGGTTaGTCTCTGACCAGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWSQYAG*SLTRVP
Trigger: GGGCACCCTGGTCAGAGACCAACCAGCATATTGGGA...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGCTGGTCCCAATATGCTaGTTGGTCTCTGACCAGGGT +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGLVPIC*LVSDQG
Trigger: ACCCTGGTCAGAGACCAACCAGCATATTGGGACCAG...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGTTCTTTCTGGTAGTGTaGCAGTGTAGGTTAGTTGAG +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKFFLVV*QCRLVE
Trigger: CTCAACTAACCTACACTGCCACACTACCAGAAAGAA...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGGGGTGGGAGGGTGAATaGAAAAGATCACTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKGWEGE*KRSLQD
Trigger: GTCCTGGAGTGATCTTTTCCATTCACCCTCCCACCC...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACAAGACTGCTAGATGGTaGGTACACAGGATGAACAAT +
Preference number: 4 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNKTARW*VHRMNN
Trigger: ATTGTTCATCCTGTGTACCCACCATCTAGCAGTCTT...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGAGGGGGAATGGAAGTTaGAATTTCAAATATCCCCTC +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKRGNGS*NFKYPL
Trigger: GAGGGGATATTTGAAATTCCAACTTCCATTCCCCCT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACAGGGGGAATGGAAGTTaGAATTTCAAATATCCCCTC +
Preference number: 4 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNRGNGS*NFKYPL
Trigger: GAGGGGATATTTGAAATTCCAACTTCCATTCCCCCT...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGACCAAACATGCTTGGTaGAGGTTTCTCTCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWTKHAW*RFLSSF
Trigger: GAAAGACGAGAGAAACCTTCACCAAGCATGTTTGGT...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGGTCATCCGTCACTCTaGAAAACAGATCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVGHPSL*KTDHPA
Trigger: AGCTGGGTGATCTGTTTTTCAGAGTGACGGATGACC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGGTCATCCGTCACTCTaGAAAACAGATCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCGHPSL*KTDHPA
Trigger: AGCTGGGTGATCTGTTTTTCAGAGTGACGGATGACC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCAGCTGATAATGCCCCTTaGTGCATTTGGTCACCACAT +
Preference number: 4 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPADNAP*CIWSPH
Trigger: ATGTGGTGACCAAATGCATCAAGGGGCATTATCAGC...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR TCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCACAGAAGAGAAGTGACTaGCCACAGACTCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPQKRSD*PQTHGG
Trigger: CCCACCATGAGTCTGTGGTCAGTCACTTCTCTTCTG...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGTCCCGACTGCTCTaGGACATGGAATCATTTTCC +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVVSRLL*DMESFS
Trigger: GGAAAATGATTCCATGTCTCAGAGCAGTCGGGACAC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGTGTCCCGACTGCTCTaGGACATGGAATCATTTTCC +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCVSRLL*DMESFS
Trigger: GGAAAATGATTCCATGTCTCAGAGCAGTCGGGACAC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCTTGCGCTCTATCAGTaGCCCTTTCTTGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCLALYQ*PFLGCV
Trigger: CACACATCCAAGAAAGGGTCACTGATAGAGCGCAAG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTAGGAACCAACCCAGCTaGTCTCTTAGCACTTGGATC +
Preference number: 4 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISRNQPS*SLSTWI
Trigger: GATCCAAGTGCTAAGAGATCAGCTGGGTTGGTTCCT...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGAGGAACCAACCCAGCTaGTCTCTTAGCACTTGGATC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWRNQPS*SLSTWI
Trigger: GATCCAAGTGCTAAGAGATCAGCTGGGTTGGTTCCT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGATGAAGCGGCTAGGATaGGGGTTAAACCCTTTCGCT +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGMKRLG*GLNPFA
Trigger: AGCGAAAGGGTTTAACCCTCATCCTAGCCGCTTCAT...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTATGAAGCGGCTAGGATaGGGGTTAAACCCTTTCGCT +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVMKRLG*GLNPFA
Trigger: AGCGAAAGGGTTTAACCCTCATCCTAGCCGCTTCAT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTCGACGGCTGCTGTGGTaGTTGCTGCTGCTGCATGCG +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPRRLLW*LLLLHA
Trigger: CGCATGCAGCAGCAGCAATCACCACAGCAGCCGTCG...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCATGGAACAGCTGTTCTTaGGCAATGCCTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPWNSCS*AMPLPS
Trigger: AGAAGGAAGAGGCATTGCTCAAGAACAGCTGTTCCA...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGACAGTGAAGCACAAATaGAGAAGCAACAGGCATTAT +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKTVKHK*RSNRHY
Trigger: ATAATGCCTGTTGCTTCTTCATTTGTGCTTCACTGT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGACAGGATCAGGACAGTaGAGCACAAATGAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWTGSGQ*STNEEA
Trigger: TGCTTCTTCATTTGTGCTTCACTGTCCTGATCCTGT...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTACAGGATCAGGACAGTaGAGCACAAATGAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: VSTAAQILRPNISHLGQLTGSGQ*STNEEA
Trigger: TGCTTCTTCATTTGTGCTTCACTGTCCTGATCCTGT...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGCCCCATGCTTAAGCTaGGAATCACAGAACCTTGTG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVAPCLS*ESQNLV
Trigger: CACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGGCCCCATGCTTAAGCTaGGAATCACAGAACCTTGTG +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKAPCLS*ESQNLV
Trigger: CACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGC...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGGCCCCATGCTTAAGCTaGGAATCACAGAACCTTGTG +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGAPCLS*ESQNLV
Trigger: CACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGC...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGCCCCATGCTTAAGCTaGGAATCACAGAACCTTGTG +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCAPCLS*ESQNLV
Trigger: CACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCACGTATGGGAATCATaGGGGGAGGACTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCHVWES*GEDFIP
Trigger: AGGAATGAAGTCCTCCCCTCATGATTCCCATACGTG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGCAGAGACTCCAATTCTaGGGTCTCCTGCTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWQRLQF*GLLLCV
Trigger: GACACAGAGCAGGAGACCTCAGAATTGGAGTCTCTG...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCTGCTGGACACTCCTTaGAGTTCCTGGGAGTCTATT +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWLLDTP*SSWESI
Trigger: AATAGACTCCCAGGAACTTCAAGGAGTGTCCAGCAG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR TCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTCTGCTGGACACTCCTTaGAGTTCCTGGGAGTCTATT +
Preference number: 4 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISLLDTP*SSWESI
Trigger: AATAGACTCCCAGGAACTTCAAGGAGTGTCCAGCAG...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGATGGTCTCAATCTCCTaGCCTCGTGATCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGMVSIS*PRDPPA
Trigger: GGCGGGTGGATCACGAGGTCAGGAGATTGAGACCAT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGCCACCAATTCTATGTTaGGATGAGAATAGCACAACC +
Preference number: 4 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRPPILC*DENSTT
Trigger: GGTTGTGCTATTCTCATCTCAACATAGAATTGGTGG...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGATGTCATCAGAACCATaGCCACAGGGCTACATGTCC +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKMSSEP*PQGYMS
Trigger: GGACATGTAGCCCTGTGGTCATGGTTCTGATGACAT...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTACGTTTGATGAATCCTaGGAAGTACGCACTGTTCTG +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFTFDES*EVRTVL
Trigger: CAGAACAGTGCGTACTTCTCAGGATTCATCAAACGT...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418501.5
ENST00000424265.5
CDS-3UTR TCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGCAAAAACTCAAATTCTaGGCAACTGCAAAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKQKLKF*ATAKGS
Trigger: GGAACCTTTTGCAGTTGCTCAGAATTTGAGTTTTTG...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTAAGTGCCACAAAACCTaGAGGGCACTGTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVKCHKT*RALLRK
Trigger: CTTCCTCAACAGTGCCCTGCAGGTTTTGTGGCACTT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTCTTTGCCAGAGCACTaGGGAGAGTGTCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVSLPEH*GECQME
Trigger: TTCCATCTGACACTCTCCGCAGTGCTCTGGCAAAGA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGCTAGTACATACACACTaGTCAAACAATGTCATTGCA +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELLVHTH*SNNVIA
Trigger: TGCAATGACATTGTTTGAGCAGTGTGTATGTACTAG...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000680396.1
CDS-3UTR GCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTAAGTACAGTTCAGATTaGTTGGCCCGGTCATCCGTC +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCKYSSD*LARSSV
Trigger: GACGGATGACCGGGCCAAGCAATCTGAACTGTACTT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGACCAGAGCTCCTCTTaGGCTCTATCAGTGACCCTT +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWDQSSS*ALSVTL
Trigger: AAGGGTCACTGATAGAGCGCAAGAGGAGCTCTGGTC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGACCAGAGCTCCTCTTaGGCTCTATCAGTGACCCTT +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPDQSSS*ALSVTL
Trigger: AAGGGTCACTGATAGAGCGCAAGAGGAGCTCTGGTC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGCCTCCAGGATGCTACTaGTGTGCGACTTTGGGATAT +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKPPGCY*CATLGY
Trigger: ATATCCCAAAGTCGCACAGCAGTAGCATCCTGGAGG...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCCTCCAGGATGCTACTaGTGTGCGACTTTGGGATAT +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWPPGCY*CATLGY
Trigger: ATATCCCAAAGTCGCACAGCAGTAGCATCCTGGAGG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGAGTCTACCTCCAGGATaGTACTGCTGTGCGACTTTG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWSLPPG*YCCATL
Trigger: CAAAGTCGCACAGCAGTAGCATCCTGGAGGTAGACT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCCAGCCACCCATGGATaGTGTGGAGTCTACCTCCAG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGPATHG*CGVYLQ
Trigger: CTGGAGGTAGACTCCACAGCATCCATGGGTGGCTGG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTACAGAGAGCCAAAGCTaGAGCACAGTCTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCTESQS*STVSFL
Trigger: CAGAAAGGAGACTGTGCTGCAGCTTTGGCTCTCTGT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTCAAACTCTGTATCCATaGCGGATTCCAGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVQTLYP*RIPVGP
Trigger: AGGCCCAACTGGAATCCGGCATGGATACAGAGTTTG...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCAACCTTGCCTGTGGAATaGAGAGGGTTCAATGTTGTC +
Preference number: 4 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPTLPVE*RGFNVV
Trigger: GACAACATTGAACCCTCTGCATTCCACAGGCAAGGT...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCAGCTTTAGGTAAACCTTaGCTGTGGAATGCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPALGKP*LWNAEG
Trigger: ACCCTCTGCATTCCACAGGCAAGGTTTACCTAAAGC...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGGACAAGCCCCTTTGTaGTGGGAAACTCTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWGQAPL*WETLAY
Trigger: ATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGCATCCTCTGGAACTaGTCAGCCAGAGAACGGACA +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPCILWN*SARERT
Trigger: TGTCCGTTCTCTGGCTGAGCAGTTCCAGAGGATGCA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTAGAGGATTGTTGCTTTaGCCATGGCCAGTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCRGLLL*PWPVAF
Trigger: AAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TGCCCGGTTTCCAAAGGCTTCCTCACGTTTGATGAATCAAAACTGTGGGAAGAAAGAGGATTGTTGCTTTaGCCATGGCCAGTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: CPVSKGFLTFDESKLWEERGLLL*PWPVAF
Trigger: AAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCT...TTCTTCCCACAGTTTTGATTCATCAAACGTGAGGAAGCCTTTGGAAACCGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGTCCAGAGAGGATTGTTaGTTTGCCCATGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWSREDC*FAHGQW
Trigger: CCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGA...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTTGCAAAGGGAAGTGGTaGAGATATAATGTACCATCT +
Preference number: 4 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPCKGKW*RYNVPS
Trigger: AGATGGTACATTATATCTCCACCACTTCCCTTTGCA...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAACAGTTCAGATTGCTTaGCCCGGTCATCCGTCACTC +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPTVQIA*PGHPSL
Trigger: GAGTGACGGATGACCGGGCCAAGCAATCTGAACTGT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTGGGGAGGCAGGTCCTaGGTGGAAACTGGGGTACCC +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPWGGRS*VETGVP
Trigger: GGGTACCCCAGTTTCCACCCAGGACCTGCCTCCCCA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGAGTGTCACTTGAGATaGAGGGCTCCCTCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPECHLR*RAPSLN
Trigger: ATTCAGGGAGGGAGCCCTCCATCTCAAGTGACACTC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGTCAGTGACCCTTTCTTaGATGTGTGTTTCTGATTAC +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKSVTLS*MCVSDY
Trigger: GTAATCAGAAACACACATCCAAGAAAGGGTCACTGA...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACTCAGTGACCCTTTCTTaGATGTGTGTTTCTGATTAC +
Preference number: 4 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNSVTLS*MCVSDY
Trigger: GTAATCAGAAACACACATCCAAGAAAGGGTCACTGA...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGGTTGGTGCTGCTGGATaGTTTGGAGGCATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKVGAAG*FGGISR
Trigger: CCTAGAAATGCCTCCAAACCATCCAGCAGCACCAAC...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTGGTGCTGCTGGATaGTTTGGAGGCATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVVGAAG*FGGISR
Trigger: CCTAGAAATGCCTCCAAACCATCCAGCAGCACCAAC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGTTGGTGCTGCTGGATaGTTTGGAGGCATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWVGAAG*FGGISR
Trigger: CCTAGAAATGCCTCCAAACCATCCAGCAGCACCAAC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTAGTGAGAGCCTACATTaGTCTGAGAAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVSESLH*SEKPGM
Trigger: CATCCCTGGCTTCTCAGACCAATGTAGGCTCTCACT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGAGTGAGAGCCTACATTaGTCTGAGAAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGSESLH*SEKPGM
Trigger: CATCCCTGGCTTCTCAGACCAATGTAGGCTCTCACT...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTAATTTTGACTCACTGCTaGTACTCTCTATTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVILTHC*YSLFPS
Trigger: ACTGGGAAATAGAGAGTACCAGCAGTGAGTCAAAAT...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCAGAAGGTGGCTTGCTTaGTTCATCTGGTATAAATTC +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFRRWLA*FIWYKF
Trigger: GAATTTATACCAGATGAACCAAGCAAGCCACCTTCT...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGAGAAGGTGGCTTGCTTaGTTCATCTGGTATAAATTC +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKRRWLA*FIWYKF
Trigger: GAATTTATACCAGATGAACCAAGCAAGCCACCTTCT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGCTTGTACTGGGGGCTTaGTCCACCAAATTTAATGTC +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWLVLGA*STKFNV
Trigger: GACATTAAATTTGGTGGACCAAGCCCCCAGTACAAG...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAACTGCTGTGCGACTTTaGGATATGACGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPTAVRL*DMTPGR
Trigger: CCTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGATGAGTGTGACTCATaGCAGGAAGCAGGTGAATGG +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCDECDS*QEAGEW
Trigger: CCATTCACCTGCTTCCTGCCATGAGTCACACTCATC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCTCTGGGGCATCCAATaGCTCCCAACTATGATGAGA +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCLWGIQ*LPTMMR
Trigger: TCTCATCATAGTTGGGAGCCATTGGATGCCCCAGAG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCACCCCTCTCAGAGGTaGCTATTCCAGGCATCACCG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGHPSQR*LFQASP
Trigger: CGGTGATGCCTGGAATAGCCACCTCTGAGAGGGGTG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCATATACAGGGGAAGGCTaGGCTGAGCTGATGAATTTG +
Preference number: 4 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPYTGEG*AELMNL
Trigger: CAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATA...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTTTGAGGCTTTGGCCTTaGAGGCATTGGTTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: VSTAAQILRPNISHLGQLLRLWP*RHWLVF
Trigger: GAAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAA...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTGTGCTGGGAAACTCTaGCCTATAGGTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWCAGKL*PIGLLT
Trigger: AGTGAGGAGACCTATAGGCCAGAGTTTCCCAGCACA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTTGTGCTGGGAAACTCTaGCCTATAGGTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISCAGKL*PIGLLT
Trigger: AGTGAGGAGACCTATAGGCCAGAGTTTCCCAGCACA...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCTGTACTATCCCTCATaGAGACACCCTGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWLYYPS*RHPASS
Trigger: AGAGGATGCAGGGTGTCTCCATGAGGGATAGTACAG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTTGTTGCTTTGCCCATaGCCAGTGGCCTTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWLLLCP*PVAFLL
Trigger: CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCACTCTTGGTATATGTCTaGCTCTGCCAACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPLLVYV*LCQPGL
Trigger: CAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAG...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGATGTGATTTCTCTCTaGATAGGTTACACACGTATG +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFDVISL*IGYTRM
Trigger: CATACGTGTGTAACCTATCCAGAGAGAAATCACATC...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGGTCTTGGTTCCAATGTaGATGCAAAAGGATGTGATT +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKVLVPM*MQKDVI
Trigger: AATCACATCCTTTTGCATCCACATTGGAACCAAGAC...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGGAGAAGCCTGAAGACTaGCCTGATACAGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGEKPED*PDTETP
Trigger: TGGAGTCTCTGTATCAGGCCAGTCTTCAGGCTTCTC...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTCTGCAGAGCCTGTTTaGCTAAGTGGGTGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGSAEPV*LSGCQA
Trigger: CGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTATAGCCAGAAACTGCTaGACACTCCTTGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFIARNC*TLLEVP
Trigger: AGGAACTTCAAGGAGTGTCCAGCAGTTTCTGGCTAT...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGTGTACTTGGCCCCTTaGGAAGTTTCACCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWVYLAP*EVSPLS
Trigger: TGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACAC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTCCTTCCTGTGTACTTaGCCCCTTGGGAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCSFLCT*PLGKFH
Trigger: GTGAAACTTCCCAAGGGGCCAAGTACACAGGAAGGA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGTCCTTCCTGTGTACTTaGCCCCTTGGGAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGSFLCT*PLGKFH
Trigger: GTGAAACTTCCCAAGGGGCCAAGTACACAGGAAGGA...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGGGTGGGAGGGTGAATaGAAAAGATCACTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWGWEGE*KRSLQD
Trigger: GTCCTGGAGTGATCTTTTCCATTCACCCTCCCACCC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTCCTCCAGTCATCATCTaGGGGCATATCTACTCTTCG +
Preference number: 4 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISPPVII*GHIYSS
Trigger: CGAAGAGTAGATATGCCCCCAGATGATGACTGGAGG...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCCTCCAGTCATCATCTaGGGGCATATCTACTCTTCG +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCPPVII*GHIYSS
Trigger: CGAAGAGTAGATATGCCCCCAGATGATGACTGGAGG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGGGGCTCAGGTGGAGGTaGGGACATAAAGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGGLRWR*GHKASR
Trigger: CCTGGATGCTTTATGTCCCCACCTCCACCTGAGCCC...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTCTCCCATGCACTTGTaGGTTGTAAGCTGCCTAAAG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWSPMHL*VVSCLK
Trigger: CTTTAGGCAGCTTACAACTCACAAGTGCATGGGAGA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGTTTTCACTACTACACTaGAACTGGTTAAAGATTCCC +
Preference number: 4 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKFSLLH*NWLKIP
Trigger: GGGAATCTTTAACCAGTTTCAGTGTAGTAGTGAAAA...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR TCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGACACACGGCGAATCCTaGTCCTCTCTCCACAGTTGC +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGTHGES*SSLHSC
Trigger: GCAACTGTGGAGAGAGGATCAGGATTCGCCGTGTGT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGGCTGATAATGCCCCTTaGTGCATTTGGTCACCACAT +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKADNAP*CIWSPH
Trigger: ATGTGGTGACCAAATGCATCAAGGGGCATTATCAGC...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR TCA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTATTGGATGTGTGTTTCTaGTTACATTCACTATCAGTC +
Preference number: 4 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVLDVCF*LHSLSV
Trigger: GACTGATAGTGAATGTAATCAGAAACACACATCCAA...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
CDS-3UTR TCA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTTTGGATGTGTGTTTCTaGTTACATTCACTATCAGTC +
Preference number: 4 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPLDVCF*LHSLSV
Trigger: GACTGATAGTGAATGTAATCAGAAACACACATCCAA...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
CDS-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGGAAGAACTGGATTTTaGCTCACTGCTGGTACTCTC +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVGRTGF*LTAGTL
Trigger: GAGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCTATAAATTCTTTAGCTaGATCCTCAGAAAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFYKFFS*ILRKGA
Trigger: AGCCCCTTTTCTGAGGATTCAGCTAAAGAATTTATA...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR TCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGAGGAACCAACCCAGCTaGTCTCTTAGCACTTGGATC +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWRNQPS*SLSTWI
Trigger: GATCCAAGTGCTAAGAGATCAGCTGGGTTGGTTCCT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAATGAAGCGGCTAGGATaGGGGTTAAACCCTTTCGCT +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPMKRLG*GLNPFA
Trigger: AGCGAAAGGGTTTAACCCTCATCCTAGCCGCTTCAT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTAATCTCCTGACCTCGTaGTCCACCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGNLLTS*STRLSL
Trigger: GAGGCTGAGGCGGGTGGATCACGAGGTCAGGAGATT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGATGTCATCAGAACCATaGCCACAGGGCTACATGTCC +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWMSSEP*PQGYMS
Trigger: GGACATGTAGCCCTGTGGTCATGGTTCTGATGACAT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAATGTCATCAGAACCATaGCCACAGGGCTACATGTCC +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPMSSEP*PQGYMS
Trigger: GGACATGTAGCCCTGTGGTCATGGTTCTGATGACAT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGATCCTGGAAAGTCTTTaGCAGAGCACTGCGGAGAGT +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWILESL*QSTAES
Trigger: ACTCTCCGCAGTGCTCTGGCAAAGACTTTCCAGGAT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGCTAGTACATACACACTaGTCAAACAATGTCATTGCA +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKLVHTH*SNNVIA
Trigger: TGCAATGACATTGTTTGAGCAGTGTGTATGTACTAG...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTGTCGTAGCATGTCCTaGTGTATGACTGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWCRSMS*CMTGTQ
Trigger: CTGAGTTCCAGTCATACAGCAGGACATGCTACGACA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGTCCTGTGTCCCGACTaGTCTGAGACATGGAATCAT +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPVLCPD*SETWNH
Trigger: ATGATTCCATGTCTCAGAGCAGTCGGGACACAGGAC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGTCCTGTGTCCCGACTaGTCTGAGACATGGAATCAT +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWVLCPD*SETWNH
Trigger: ATGATTCCATGTCTCAGAGCAGTCGGGACACAGGAC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGCTGGTCTCCTCCTCTaGCCCTGCAGTGAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVAGLLL*PCSESL
Trigger: TAGGCTCTCACTGCAGGGGCAGAGGAGGAGACCAGC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAAGTCTACCTCCAGGATaGTACTGCTGTGCGACTTTG +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPSLPPG*YCCATL
Trigger: CAAAGTCGCACAGCAGTAGCATCCTGGAGGTAGACT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTCTGGCCACCTCTTCCTaGAATTCATCCAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVLATSS*NSSSSL
Trigger: AAGTGAACTGGATGAATTGCAGGAAGAGGTGGCCAG...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGACAGAGAGCCAAAGCTaGAGCACAGTCTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWTESQS*STVSFL
Trigger: CAGAAAGGAGACTGTGCTGCAGCTTTGGCTCTCTGT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGGGCTCTGCTGTGCGTaGTACAGCTGGCACCATGCA +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPGLCCA*YSWHHA
Trigger: TGCATGGTGCCAGCTGTAGCACGCACAGCAGAGCCC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGCAAACTCTGTATCCATaGCGGATTCCAGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWQTLYP*RIPVGP
Trigger: AGGCCCAACTGGAATCCGGCATGGATACAGAGTTTG...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGCTTTAGGTAAACCTTaGCTGTGGAATGCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCALGKP*LWNAEG
Trigger: ACCCTCTGCATTCCACAGGCAAGGTTTACCTAAAGC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGCTGTTCTTGAGCAATaGCTCTTCCTTCTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVAVLEQ*LFLLVE
Trigger: CTCCACAAGAAGGAAGAGGCATTGCTCAAGAACAGC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGAGAGGATTGTTGCTTTaGCCATGGCCAGTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWRGLLL*PWPVAF
Trigger: AAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGGTATATGTCTGGCTCTaGCAACCTGGGCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGVYVWL*QPGLSS
Trigger: GGAGGACAGCCCAGGTTGGCAGAGCCAGACATATAC...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTAATTCTGAGGTCTCCTaGTCTGTGTCTTGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: SWPRCPMLKLRITEPCDINSEVS*SVSWFQ
Trigger: TTGGAACCAAGACACAGAGCAGGAGACCTCAGAATT...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTCAGGCGGTATCCTGCTaGCCCCATCCAGAACAGCCA +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGQAVSC*PHPEQP
Trigger: TGGCTGTTCTGGATGGGGGCAGCAGGATACCGCCTG...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCCTCCCCATGCCATCTaGAGAGCCTGTTTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGPPHAI*RACLAK
Trigger: CTTAGCCAAACAGGCTCTGCAGATGGCATGGGGAGG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGGAGCTGGAACAACGGTaGCCGGTTTCCAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGELEQR*PVSKGF
Trigger: GAAGCCTTTGGAAACCGGGCACCGTTGTTCCAGCTC...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR GCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGAATCTGGTCCCAATATaGTGGTTGGTCTCTGACCAG +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKNLVPI*WLVSDQ
Trigger: CTGGTCAGAGACCAACCAGCATATTGGGACCAGATT...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR GCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTAATCTGGTCCCAATATaGTGGTTGGTCTCTGACCAG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVNLVPI*WLVSDQ
Trigger: CTGGTCAGAGACCAACCAGCATATTGGGACCAGATT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGAACCTGAAGGCCCTTaGTTCTTTCTGGTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWEPEGP*FFLVVW
Trigger: CCACACTACCAGAAAGAAGCAAGGGCCTTCAGGTTC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGACTCTAGCCCTGATCTaGTCTCTTCTGGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWTLALI*SLLGAS
Trigger: AGATGCTCCCAGAAGAGAGCAGATCAGGGCTAGAGT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGTACATATATCCTCTTTaGTTTCATCAGCAATGTGGA +
Preference number: 4 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKYIYPL*FHQQCG
Trigger: TCCACATTGCTGATGAAACCAAAGAGGATATATGTA...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000680396.1
CDS-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGTCTGCTAAGTCTGAGTaGTCTGAGTCCCATACCAGC +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWSAKSE*SESHTS
Trigger: GCTGGTATGGGACTCAGACCACTCAGACTTAGCAGA...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGTCCTGGGTGGAAACTaGGGTACCCTGGGGATCTGC +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPVLGGN*GTLGIC
Trigger: GCAGATCCCCAGGGTACCCCAGTTTCCACCCAGGAC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGACTGGAACTCAGCTTaGGGAGGCAGGTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGDWNSA*GGRSWV
Trigger: CACCCAGGACCTGCCTCCCCAAGCTGAGTTCCAGTC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGACTGGAACTCAGCTTaGGGAGGCAGGTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVDWNSA*GGRSWV
Trigger: CACCCAGGACCTGCCTCCCCAAGCTGAGTTCCAGTC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTGGTATCCCGAGGCCTaGGGCTCATCGCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGWYPEA*GSSPFL
Trigger: GAGGAAAGGCGATGAGCCCCAGGCCTCGGGATACCA...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGTTGGTGCTGCTGGATaGTTTGGAGGCATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPVGAAG*FGGISR
Trigger: CCTAGAAATGCCTCCAAACCATCCAGCAGCACCAAC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTTGGGACGATACTTGCTaGAAGAACTGGATTTTGACT +
Preference number: 4 (lower is better)
Translates to: VSTAAQILRPNISHLGQLWDDTC*KNWILT
Trigger: AGTCAAAATCCAGTTCTTCCAGCAAGTATCGTCCCA...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGTTTGGGTCTCCATGTaGGACGATACTTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWVWVSM*DDTCWK
Trigger: CTTCCAGCAAGTATCGTCCCACATGGAGACCCAAAC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCACCCATGGATGCTGTaGAGTCTACCTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGHPWML*SLPPGC
Trigger: GCATCCTGGAGGTAGACTCCACAGCATCCATGGGTG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCATGGCTTAACAATACTTaGAGCGGGATAGGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPWLNNT*SGIGCS
Trigger: TGAACAGCCTATCCCGCTCCAAGTATTGTTAAGCCA...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCTGGCTTAACAATACTTaGAGCGGGATAGGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: ISAVEVFERPGSWAECNLWLNNT*SGIGCS
Trigger: TGAACAGCCTATCCCGCTCCAAGTATTGTTAAGCCA...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTCCAGTTGGGCCTCTTaGCTTAACAATACTTGGAGC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWSSWAS*LNNTWS
Trigger: GCTCCAAGTATTGTTAAGCCAAGAGGCCCAACTGGA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGATGCCGGATTCCAGTTaGGCCTCTTGGCTTAACAAT +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWMPDSS*ASWLNN
Trigger: ATTGTTAAGCCAAGAGGCCCAACTGGAATCCGGCAT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTATGCCGGATTCCAGTTaGGCCTCTTGGCTTAACAAT +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCMPDSS*ASWLNN
Trigger: ATTGTTAAGCCAAGAGGCCCAACTGGAATCCGGCAT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGATGAGTGTGACTCATaGCAGGAAGCAGGTGAATGG +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPDECDS*QEAGEW
Trigger: CCATTCACCTGCTTCCTGCCATGAGTCACACTCATC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGGTAAACCTTGCCTGTaGAATGCAGAGGGTTCAATG +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCGKPCL*NAEGSM
Trigger: CATTGAACCCTCTGCATTCCACAGGCAAGGTTTACC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTTGCAGCTTACCCTCTaGGGCATCCAATGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGLQLTL*GIQWLP
Trigger: TGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATTGTTGCTTTGCCCATaGCCAGTGGCCTTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPLLLCP*PVAFLL
Trigger: CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTCTAACATCTCTCACTTaGGACAGCTTCTCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: VSTAAQILRPNISHLGQLLTSLT*DSFSWY
Trigger: ATACCAAGAGAAGCTGTCCCAAGTGAGAGATGTTAG...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCAACTGTTCTGGCTTCATaGAGACCATGCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPTVLAS*RPCSIS
Trigger: AGAAATGGAGCATGGTCTCCATGAAGCCAGAACAGT...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGAAGTACGCACTGTTCTaGCTTCATGGAGACCATGCT +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWKYALF*LHGDHA
Trigger: AGCATGGTCTCCATGAAGCCAGAACAGTGCGTACTT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTAAGTACGCACTGTTCTaGCTTCATGGAGACCATGCT +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCKYALF*LHGDHA
Trigger: AGCATGGTCTCCATGAAGCCAGAACAGTGCGTACTT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGGGGCATCAGGACATCTaGGGACAGGAACTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGGHQDI*GQELWL
Trigger: CAACCACAGTTCCTGTCCCCAGATGTCCTGATGCCC...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTGGGCTCCCCTGCCATaGTGGGCATCAGGACATCTG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGWAPLP*WASGHL
Trigger: CAGATGTCCTGATGCCCACCATGGCAGGGGAGCCCA...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTTGAGGATTGCACCCTaGAGTAGTCAGGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCLRIAP*SSQESG
Trigger: ACCAGATTCCTGACTACTCCAGGGTGCAATCCTCAA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTTGAGGATTGCACCCTaGAGTAGTCAGGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWLRIAP*SSQESG
Trigger: ACCAGATTCCTGACTACTCCAGGGTGCAATCCTCAA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCAATGAAGACTGCTAGATaGTGGGTACACAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPMKTAR*WVHRMN
Trigger: GTTCATCCTGTGTACCCACCATCTAGCAGTCTTCAT...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGGGTAATAGGGATAGGTaGATAAAACAAAGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: KQQALWGGRFYTGEGWAEGNRDR*IKQRVE
Trigger: TTCTACTCTTTGTTTTATCCACCTATCCCTATTACC...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGGGTAATAGGGATAGGTaGATAAAACAAAGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: RNLVPICWLVSDQGAQELGNRDR*IKQRVE
Trigger: TTCTACTCTTTGTTTTATCCACCTATCCCTATTACC...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
3UTR CAA 72 bp GGTAAACCTTGCCTGTGGAATGCAGAGGGTTCAATGTaGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: GKPCLWNAEGSM*STSTEVRSFKA
Trigger: TGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGAACCCTCTGCATTCCACAGGCAAGGTTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCAACTACCACGACCCCCTaGAAAATAATTTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPTTTTP*KIISLP
Trigger: TGGAAGAGAAATTATTTTTCAGGGGGTCGTGGTAGT...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR TCA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTGTCATTGCAAATTTCTaGTGGGAAATGCAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SWPRCPMLKLRITEPCDIVIANF*WEMQCW
Trigger: CCAACACTGCATTTCCCATCAGAAATTTGCAATGAC...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR TCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAAATGTACCATCTGGATaGAAGGCAGCGGATCAGAAG +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPNVPSG*KAADQK
Trigger: CTTCTGATCCGCTGCCTTTCATCCAGATGGTACATT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTACCAAACATGCTTGGTaGAGGTTTCTCTCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVTKHAW*RFLSSF
Trigger: GAAAGACGAGAGAAACCTTCACCAAGCATGTTTGGT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGACCAAACATGCTTGGTaGAGGTTTCTCTCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWTKHAW*RFLSSF
Trigger: GAAAGACGAGAGAAACCTTCACCAAGCATGTTTGGT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTGGGCCCAATCTCCTTaGCATGAGCATCATCAAAAT +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCWAQSP*HEHHQN
Trigger: ATTTTGATGATGCTCATGTCAAGGAGATTGGGCCCA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGCTGATAATGCCCCTTaGTGCATTTGGTCACCACAT +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWADNAP*CIWSPH
Trigger: ATGTGGTGACCAAATGCATCAAGGGGCATTATCAGC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGGAAGAACTGGATTTTaGCTCACTGCTGGTACTCTC +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWGRTGF*LTAGTL
Trigger: GAGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGGAAGAACTGGATTTTaGCTCACTGCTGGTACTCTC +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPGRTGF*LTAGTL
Trigger: GAGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGAGGGGAAGGCTGGGCTaGGCTGATGAATTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGRGRLG*ADEFEG
Trigger: TCCTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTTTTCTCTTGACCCTGTaGGAAAGGAGGCTTAGAATC +
Preference number: 4 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISFLLTL*ERRLRI
Trigger: GATTCTAAGCCTCCTTTCTCACAGGGTCAAGAGAAA...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCAGAGACTCCAATTCTaGGGTCTCCTGCTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGQRLQF*GLLLCV
Trigger: GACACAGAGCAGGAGACCTCAGAATTGGAGTCTCTG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTAGACAACGGTGCCACTaGGACTGCGTGAGATGCGAC +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGRQRCH*DCVRCD
Trigger: GTCGCATCTCACGCAGTCTCAGTGGCACCGTTGTCT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339859.8
ENST00000466048.6
CDS-3UTR TCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGGTGGGTACACAGGATaGACAATGGGAGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGGGYTG*TMGGWE
Trigger: CTCCCACCCTCCCATTGTTCATCCTGTGTACCCACC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAATGGTCTCAATCTCCTaGCCTCGTGATCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVMVSIS*PRDPPA
Trigger: GGCGGGTGGATCACGAGGTCAGGAGATTGAGACCAT...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGCACAACCATGGCAGTaGTGCAGGGTACCAACGCTG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGAQPWQ*CRVPTL
Trigger: CAGCGTTGGTACCCTGCATCACTGCCATGGTTGTGC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCACAGGGAATGCTaGCAGGCCATAATACCTGGG +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVGHREC*QAIIPG
Trigger: CCCAGGTATTATGGCCTGTCAGCATTCCCTGTGCCC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTACGTTTGATGAATCCTaGGAAGTACGCACTGTTCTG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVTFDES*EVRTVL
Trigger: CAGAACAGTGCGTACTTCTCAGGATTCATCAAACGT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000681793.1
CDS-3UTR GCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGCAGATCCCCCATGGTaGTGGCATTCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPADPPW*WHSAAA
Trigger: AGCTGCTGCAGAATGCCAGCACCATGGGGGATCTGC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTGCTGTTCCTCTCACTaGTTTCATAGCCAGATTCCA +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVCCSSH*FHSQIP
Trigger: TGGAATCTGGCTATGAAAGCAGTGAGAGGAACAGCA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCACTACAGCTGGCACCATaGAGGGCAAGTCTTAGTTTA +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPLQLAP*RASLSL
Trigger: TAAACTAAGACTTGCCCTGCATGGTGCCAGCTGTAG...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTATTGCTGCTGCTGCATaGGATCCTGCAGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPIAAAA*DPAGSV
Trigger: CACGGAGCCTGCAGGATCGCATGCAGCAGCAGCAAT...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCTCATGGAGACACCCTaGATCCTCTGGAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGLMETP*ILWNCS
Trigger: TGAGCAGTTCCAGAGGATGCAGGGTGTCTCCATGAG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGAATTCTGAGGTCTCCTaGTCTGTGTCTTGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWNSEVS*SVSWFQ
Trigger: TTGGAACCAAGACACAGAGCAGGAGACCTCAGAATT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTCACATAGCCAGAAACTaGTGGACACTCCTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVHIARN*WTLLEV
Trigger: AACTTCAAGGAGTGTCCAGCAGTTTCTGGCTATGTG...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGAATCTGGTCCCAATATaGTGGTTGGTCTCTGACCAG +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWNLVPI*WLVSDQ
Trigger: CTGGTCAGAGACCAACCAGCATATTGGGACCAGATT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAAATCTGGTCCCAATATaGTGGTTGGTCTCTGACCAG +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPNLVPI*WLVSDQ
Trigger: CTGGTCAGAGACCAACCAGCATATTGGGACCAGATT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAAGTGGGAGGCATAACTaGTTTGCCTCCAGTCATCAT +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPSGRHN*FASSHH
Trigger: ATGATGACTGGAGGCAAAGCAGTTATGCCTCCCACT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGAGTGGGAGGCATAACTaGTTTGCCTCCAGTCATCAT +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWSGRHN*FASSHH
Trigger: ATGATGACTGGAGGCAAAGCAGTTATGCCTCCCACT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGAAGGCTGTGTTAGTGTaGCTGACTCCATCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWKAVLV*LTPSVQ
Trigger: TTGAACAGATGGAGTCAGGCACACTAACACAGCCTT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGAAGGCTGTGTTAGTGTaGCTGACTCCATCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKKAVLV*LTPSVQ
Trigger: TTGAACAGATGGAGTCAGGCACACTAACACAGCCTT...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGCGGAGAGTGTCAGATaGAAGCACTTTTTCACTACT +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWAESVR*KHFFTT
Trigger: AGTAGTGAAAAAGTGCTTCCATCTGACACTCTCCGC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGGCGGAGAGTGTCAGATaGAAGCACTTTTTCACTACT +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGAESVR*KHFFTT
Trigger: AGTAGTGAAAAAGTGCTTCCATCTGACACTCTCCGC...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGCGGAGAGTGTCAGATaGAAGCACTTTTTCACTACT +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCAESVR*KHFFTT
Trigger: AGTAGTGAAAAAGTGCTTCCATCTGACACTCTCCGC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTCCATAATTCCCAGCTaGAAACGTTGTTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWSIIPS*KRCSSW
Trigger: CCAGGATGAACAACGTTTCCAGCTGGGAATTATGGA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTCCGCAGATCCCCCATaGTGCTGGCATTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPSADPP*CWHSAA
Trigger: TGCTGCAGAATGCCAGCACCATGGGGGATCTGCGGA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGGAGTGTCACTTGAGATaGAGGGCTCCCTCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGECHLR*RAPSLN
Trigger: ATTCAGGGAGGGAGCCCTCCATCTCAAGTGACACTC...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCCTGAGAAGCCAGGGATaGTCTGTTATGGATCATATT +
Preference number: 4 (lower is better)
Translates to: ISAVEVFERPGSWAECNLLRSQG*SVMDHI
Trigger: AATATGATCCATAACAGACCATCCCTGGCTTCTCAG...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGAGAAGGTGGCTTGCTTaGTTCATCTGGTATAAATTC +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWRRWLA*FIWYKF
Trigger: GAATTTATACCAGATGAACCAAGCAAGCCACCTTCT...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTAATGTCGTAAGAAGGTaGCTTGCTTGGTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISNVVRR*LAWFIW
Trigger: CCAGATGAACCAAGCAAGCCACCTTCTTACGACATT...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGAATGTCGTAAGAAGGTaGCTTGCTTGGTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWNVVRR*LAWFIW
Trigger: CCAGATGAACCAAGCAAGCCACCTTCTTACGACATT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGCTTGTACTGGGGGCTTaGTCCACCAAATTTAATGTC +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKLVLGA*STKFNV
Trigger: GACATTAAATTTGGTGGACCAAGCCCCCAGTACAAG...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTACCCCAGCGCTTGTACTaGGGGCTTGGTCCACCAAAT +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVPQRLY*GLGPPN
Trigger: ATTTGGTGGACCAAGCCCCCAGTACAAGCGCTGGGG...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTTGTCCAGCCACCCATaGATGCTGTGGAGTCTACCT +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGLSSHP*MLWSLP
Trigger: AGGTAGACTCCACAGCATCCATGGGTGGCTGGACAA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGTGGCTTAACAATACTTaGAGCGGGATAGGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGWLNNT*SGIGCS
Trigger: TGAACAGCCTATCCCGCTCCAAGTATTGTTAAGCCA...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTGGCTTAACAATACTTaGAGCGGGATAGGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCWLNNT*SGIGCS
Trigger: TGAACAGCCTATCCCGCTCCAAGTATTGTTAAGCCA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCAAGGCAGATCTACTaGGGGAGCTGTGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGSRQIY*GSCAVG
Trigger: CCCCACAGCACAGCTCCCCCAGTAGATCTGCCTTGA...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTCACCCCTCTCAGAGGTaGCTATTCCAGGCATCACCG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGHPSQR*LFQASP
Trigger: CGGTGATGCCTGGAATAGCCACCTCTGAGAGGGGTG...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTACACCCCTCTCAGAGGTaGCTATTCCAGGCATCACCG +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVHPSQR*LFQASP
Trigger: CGGTGATGCCTGGAATAGCCACCTCTGAGAGGGGTG...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGAAGCAACAGGCATTATaGGGTGGCAGGTTCTATACA +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKKQQAL*GGRFYT
Trigger: TGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTTGAGGCTTTGGCCTTaGAGGCATTGGTTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWLRLWP*RHWLVF
Trigger: GAAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTTGAGGCTTTGGCCTTaGAGGCATTGGTTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVLRLWP*RHWLVF
Trigger: GAAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGAAGTTTTGAGGCTTTaGCCTTGGAGGCATTGGTTA +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWEVLRL*PWRHWL
Trigger: TAACCAATGCCTCCAAGGCCAAAGCCTCAAAACTTC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCAAGCCCCTTTGTGCTaGGAAACTCTGGCCTATAGG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGQAPLC*ETLAYR
Trigger: CCTATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGAGAAGAATGTTCAGTaGACTCTTCCCAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWEKNVQ*TLPRKV
Trigger: CACTTTCCTGGGAAGAGTCCACTGAACATTCTTCTC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGGATGTGATTTCTCTCTaGATAGGTTACACACGTATG +
Preference number: 4 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWDVISL*IGYTRM
Trigger: CATACGTGTGTAACCTATCCAGAGAGAAATCACATC...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGCCTGTTTGGCTAAGTaGGTGCCAGGCGGTATCCTG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGACLAK*VPGGIL
Trigger: CAGGATACCGCCTGGCACCCACTTAGCCAAACAGGC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTCTGCAGAGCCTGTTTaGCTAAGTGGGTGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPSAEPV*LSGCQA
Trigger: CGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGACTGTTCTGGCTTCATaGAGACCATGCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKTVLAS*RPCSIS
Trigger: AGAAATGGAGCATGGTCTCCATGAAGCCAGAACAGT...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTGATGAATCAAAACTGTaGGAAGAAACCGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISDESKL*EETGAS
Trigger: GGAAGCTCCGGTTTCTTCCCACAGTTTTGATTCATC...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTGGGGACAGGAACTGTaGTTGGGGAAGGTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGWGQEL*LGKVEL
Trigger: CAACTCTACCTTCCCCAACCACAGTTCCTGTCCCCA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTATAGCCAGAAACTGCTaGACACTCCTTGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISIARNC*TLLEVP
Trigger: AGGAACTTCAAGGAGTGTCCAGCAGTTTCTGGCTAT...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGGTGTACTTGGCCCCTTaGGAAGTTTCACCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGVYLAP*EVSPLS
Trigger: TGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACAC...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCTGGTCCCAATATGCTaGTTGGTCTCTGACCAGGGT +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGLVPIC*LVSDQG
Trigger: ACCCTGGTCAGAGACCAACCAGCATATTGGGACCAG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGTTGAGGATTGCACCCTaGAGTAGTCAGGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWLRIAP*SSQESG
Trigger: ACCAGATTCCTGACTACTCCAGGGTGCAATCCTCAA...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GTTTCCAAAGGCTTCCTCACGTTTGATGAATCAAAACTGTGGGAAGAAACCGGATTGAGGATTGCACCCTaGAGTAGTCAGGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: VSKGFLTFDESKLWEETGLRIAP*SSQESG
Trigger: ACCAGATTCCTGACTACTCCAGGGTGCAATCCTCAA...TCCGGTTTCTTCCCACAGTTTTGATTCATCAAACGTGAGGAAGCCTTTGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGATGAAGACTGCTAGATaGTGGGTACACAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWMKTAR*WVHRMN
Trigger: GTTCATCCTGTGTACCCACCATCTAGCAGTCTTCAT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTACAAAGAGTAGAAGTTaGGAGTATAGTAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: VSTAAQILRPNISHLGQLTKSRS*EYSREQ
Trigger: CTGTTCCCTACTATACTCCCAACTTCTACTCTTTGT...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGGGTAATAGGGATAGGTaGATAAAACAAAGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKGNRDR*IKQRVE
Trigger: TTCTACTCTTTGTTTTATCCACCTATCCCTATTACC...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
3UTR CAA 72 bp GAGTTCTTCCTTAGACTACCTGACAAACTTCTATCCTaGAAACCTGTACTATCCCTCATGGAGACACCCTGC +
Preference number: 4 (lower is better)
Translates to: EFFLRLPDKLLS*KPVLSLMETPC
Trigger: GCAGGGTGTCTCCATGAGGGATAGTACAGGTTTCAAGGATAGAAGTTTGTCAGGTAGTCTAAGGAAGAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTACTACCACGACCCCCTaGAAAATAATTTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVTTTTP*KIISLP
Trigger: TGGAAGAGAAATTATTTTTCAGGGGGTCGTGGTAGT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGGGGGCTATGGAGGTTaGGCTTCGAGGTGCAAACAT +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPGGYGG*ASRCKH
Trigger: ATGTTTGCACCTCGAAGCTCAACCTCCATAGCCCCC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGTCAGCAATGTGGAAGTaGATTCTCATCAGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGSAMWK*ILIRRF
Trigger: AAACCTCCTGATGAGAATTCACTTCCACATTGCTGA...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR TCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGCCCAATCTCCTTaGCATGAGCATCATCAAAAT +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPWAQSP*HEHHQN
Trigger: ATTTTGATGATGCTCATGTCAAGGAGATTGGGCCCA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGCATGTCCTGCTGTATaGCTGGAACTCAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVACPAV*LELSLG
Trigger: CCCCAAGCTGAGTTCCAGTCATACAGCAGGACATGC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGAGCCTACATTGGTCTaGGAAGCCAGGGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPEPTLV*EARDGL
Trigger: CAGACCATCCCTGGCTTCTCAGACCAATGTAGGCTC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTATCCCTGTAGACATTTaGGCTCTCAGGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGIPVDI*ALRQGC
Trigger: GCAGCCCTGCCTGAGAGCTCAAATGTCTACAGGGAT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGATGAAGCGGCTAGGATaGGGGTTAAACCCTTTCGCT +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGMKRLG*GLNPFA
Trigger: AGCGAAAGGGTTTAACCCTCATCCTAGCCGCTTCAT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTCCGTCACTCCTCCCCTaGTTCTGCAGTTCATCCAAG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGPSLLP*FCSSSK
Trigger: CTTGGATGAACTGCAGAATCAGGGGAGGAGTGACGG...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTGTTCACTTGTTGGCTaGGAGAGAGTCCCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGCSLVG*ERVPAC
Trigger: ACAGGCGGGGACTCTCTCTCAGCCAACAAGTGAACA...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCAACAAACTTCTATCCTTaGAACCTGTACTATCCCTCA +
Preference number: 4 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPTNFYP*NLYYPS
Trigger: TGAGGGATAGTACAGGTTTCAAGGATAGAAGTTTGT...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATTTCTCTTGACCCTGTaGGAAAGGAGGCTTAGAATC +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPFLLTL*ERRLRI
Trigger: GATTCTAAGCCTCCTTTCTCACAGGGTCAAGAGAAA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGAATCACAGAACCTTGTaGTATTCACCCAGGAATCCA +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWNHRTL*YSPRNP
Trigger: TGGATTCCTGGGTGAATATCACAAGGTTCTGTGATT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCACGTATGGGAATCATaGGGGGAGGACTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGHVWES*GEDFIP
Trigger: AGGAATGAAGTCCTCCCCTCATGATTCCCATACGTG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCTGCTGGACACTCCTTaGAGTTCCTGGGAGTCTATT +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGLLDTP*SSWESI
Trigger: AATAGACTCCCAGGAACTTCAAGGAGTGTCCAGCAG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR TCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGACCTCAGGGGTACATaGAGACTGCTAGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVDLRGT*RLLDGG
Trigger: CCCACCATCTAGCAGTCTTCATGTACCCCTGAGGTC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGAATAACCTTTACCATTaGCTGTGCTGCAGGACTCTA +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWNNLYH*LCCRTL
Trigger: TAGAGTCCTGCAGCACAGTCAATGGTAAAGGTTATT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTAATAACCTTTACCATTaGCTGTGCTGCAGGACTCTA +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVNNLYH*LCCRTL
Trigger: TAGAGTCCTGCAGCACAGTCAATGGTAAAGGTTATT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGCCACCAATTCTATGTTaGGATGAGAATAGCACAACC +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGPPILC*DENSTT
Trigger: GGTTGTGCTATTCTCATCTCAACATAGAATTGGTGG...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTCCACCAATTCTATGTTaGGATGAGAATAGCACAACC +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVPPILC*DENSTT
Trigger: GGTTGTGCTATTCTCATCTCAACATAGAATTGGTGG...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGATCTGTTCAAAAGGGTaGATGTTATGTTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWICSKG*MLCWQL
Trigger: GAGCTGCCAACATAACATTCACCCTTTTGAACAGAT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGATCCTGGAAAGTCTTTaGCAGAGCACTGCGGAGAGT +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGILESL*QSTAES
Trigger: ACTCTCCGCAGTGCTCTGGCAAAGACTTTCCAGGAT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTATGTGGGACGATACTTaGTGGAAGAACTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVMWDDT*WKNWIL
Trigger: CAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACAT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGCTGTTCCTCTCACTaGTTTCATAGCCAGATTCCA +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPCCSSH*FHSQIP
Trigger: TGGAATCTGGCTATGAAAGCAGTGAGAGGAACAGCA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGTGCTGTTCCTCTCACTaGTTTCATAGCCAGATTCCA +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWCCSSH*FHSQIP
Trigger: TGGAATCTGGCTATGAAAGCAGTGAGAGGAACAGCA...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTACTGACTCTGCCTCTTaGAGGGACCTCTCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPTDSAS*RDLSKP
Trigger: CGGCTTTGAGAGGTCCCTGCAAGAGGCAGAGTCAGT...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTATATCGACTAGGGCTCTaGTGTGCGTGCTACAGCTGG +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVYRLGL*CACYSW
Trigger: CCAGCTGTAGCACGCACAGCAGAGCCCTAGTCGATA...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTCACACCTAGAGCCTTaGAGCTTACCCTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPSHLEP*SLPSGA
Trigger: TGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGTATATGTCTGGCTCTaGCAACCTGGGCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVVYVWL*QPGLSS
Trigger: GGAGGACAGCCCAGGTTGGCAGAGCCAGACATATAC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGTATATGTCTGGCTCTaGCAACCTGGGCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGVYVWL*QPGLSS
Trigger: GGAGGACAGCCCAGGTTGGCAGAGCCAGACATATAC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTCCTCCCCATGCCATCTaGAGAGCCTGTTTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPPPHAI*RACLAK
Trigger: CTTAGCCAAACAGGCTCTGCAGATGGCATGGGGAGG...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGCACATAGCCAGAAACTaGTGGACACTCCTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWHIARN*WTLLEV
Trigger: AACTTCAAGGAGTGTCCAGCAGTTTCTGGCTATGTG...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTAAACGTTGTTCATCCTaGAAAGTCTTTGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCKRCSS*KVFARA
Trigger: TGCTCTGGCAAAGACTTTCCAGGATGAACAACGTTT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGTCCATAATTCCCAGCTaGAAACGTTGTTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWSIIPS*KRCSSW
Trigger: CCAGGATGAACAACGTTTCCAGCTGGGAATTATGGA...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTCTCTCCACAGTTGCTTaGACAGTTCCGCAGATCCCC +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPLSTVA*TVPQIP
Trigger: GGGGATCTGCGGAACTGTCCAAGCAACTGTGGAGAG...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTCTCTCCACAGTTGCTTaGACAGTTCCGCAGATCCCC +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGLSTVA*TVPQIP
Trigger: GGGGATCTGCGGAACTGTCCAAGCAACTGTGGAGAG...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGAGGGATGGTCTGTTATaGATCATATTGCTGACTGTC +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKRDGLL*IILLTV
Trigger: GACAGTCAGCAATATGATCCATAACAGACCATCCCT...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTCTGAGAAGCCAGGGATaGTCTGTTATGGATCATATT +
Preference number: 4 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISLRSQG*SVMDHI
Trigger: AATATGATCCATAACAGACCATCCCTGGCTTCTCAG...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCTGAGAAGCCAGGGATaGTCTGTTATGGATCATATT +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWLRSQG*SVMDHI
Trigger: AATATGATCCATAACAGACCATCCCTGGCTTCTCAG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGAGTGAGAGCCTACATTaGTCTGAGAAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGSESLH*SEKPGM
Trigger: CATCCCTGGCTTCTCAGACCAATGTAGGCTCTCACT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCATTTTGACTCACTGCTaGTACTCTCTATTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: ISAVEVFERPGSWAECNLILTHC*YSLFPS
Trigger: ACTGGGAAATAGAGAGTACCAGCAGTGAGTCAAAAT...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTGGGACGATACTTGCTaGAAGAACTGGATTTTGACT +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCWDDTC*KNWILT
Trigger: AGTCAAAATCCAGTTCTTCCAGCAAGTATCGTCCCA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCAGAAGGTGGCTTGCTTaGTTCATCTGGTATAAATTC +
Preference number: 4 (lower is better)
Translates to: ISAVEVFERPGSWAECNLRRWLA*FIWYKF
Trigger: GAATTTATACCAGATGAACCAAGCAAGCCACCTTCT...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGCTTAACAATACTTaGAGCGGGATAGGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPWLNNT*SGIGCS
Trigger: TGAACAGCCTATCCCGCTCCAAGTATTGTTAAGCCA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGGATGAGTGTGACTCATaGCAGGAAGCAGGTGAATGG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGDECDS*QEAGEW
Trigger: CCATTCACCTGCTTCCTGCCATGAGTCACACTCATC...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCTCTGGGGCATCCAATaGCTCCCAACTATGATGAGA +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGLWGIQ*LPTMMR
Trigger: TCTCATCATAGTTGGGAGCCATTGGATGCCCCAGAG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTTGCAGCTTACCCTCTaGGGCATCCAATGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPLQLTL*GIQWLP
Trigger: TGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGAAGCAACAGGCATTATaGGGTGGCAGGTTCTATACA +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWKQQAL*GGRFYT
Trigger: TGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGTTGAGGCTTTGGCCTTaGAGGCATTGGTTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWLRLWP*RHWLVF
Trigger: GAAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAA...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCTAACATCTCTCACTTaGGACAGCTTCTCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWLTSLT*DSFSWY
Trigger: ATACCAAGAGAAGCTGTCCCAAGTGAGAGATGTTAG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCTAACATCTCTCACTTaGGACAGCTTCTCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCLTSLT*DSFSWY
Trigger: ATACCAAGAGAAGCTGTCCCAAGTGAGAGATGTTAG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGAGGACTTCATTCCTaGCCTAGGTGCCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVGGLHS*PRCPML
Trigger: AAGCATGGGGCACCTAGGCCAGGAATGAAGTCCTCC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGAGAGACCAGGATCATaGGCTGAGTGCAACCTCCTC +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGERPGS*AECNLL
Trigger: GAGGAGGTTGCACTCAGCCCATGATCCTGGTCTCTC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAATAGCCAGAAACTGCTaGACACTCCTTGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPIARNC*TLLEVP
Trigger: AGGAACTTCAAGGAGTGTCCAGCAGTTTCTGGCTAT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTAGGAGTTGTCTGTTCTaGAGCGATGGGGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGRSCLF*SDGGGS
Trigger: AGAGCCTCCCCCATCGCTCCAGAACAGACAACTCCT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTTCTTTCTGGTAGTGTaGCAGTGTAGGTTAGTTGAG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVFFLVV*QCRLVE
Trigger: CTCAACTAACCTACACTGCCACACTACCAGAAAGAA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGAAGACTGCTAGATGGTaGGTACACAGGATGAACAAT +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWKTARW*VHRMNN
Trigger: ATTGTTCATCCTGTGTACCCACCATCTAGCAGTCTT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTAAGACTGCTAGATGGTaGGTACACAGGATGAACAAT +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVKTARW*VHRMNN
Trigger: ATTGTTCATCCTGTGTACCCACCATCTAGCAGTCTT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAATGAAGACTGCTAGATaGTGGGTACACAGGATGAAC +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPMKTAR*WVHRMN
Trigger: GTTCATCCTGTGTACCCACCATCTAGCAGTCTTCAT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCCTCCAGTCATCATCTaGGGGCATATCTACTCTTCG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGPPVII*GHIYSS
Trigger: CGAAGAGTAGATATGCCCCCAGATGATGACTGGAGG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTAGGGGGAATGGAAGTTaGAATTTCAAATATCCCCTC +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCRGNGS*NFKYPL
Trigger: GAGGGGATATTTGAAATTCCAACTTCCATTCCCCCT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGAGGGGGAATGGAAGTTaGAATTTCAAATATCCCCTC +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGRGNGS*NFKYPL
Trigger: GAGGGGATATTTGAAATTCCAACTTCCATTCCCCCT...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCACAAAGAGTAGAAGTTaGGAGTATAGTAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: ISAVEVFERPGSWAECNLTKSRS*EYSREQ
Trigger: CTGTTCCCTACTATACTCCCAACTTCTACTCTTTGT...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATCTGTTCTGGCTTCATaGAGACCATGCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPSVLAS*RPCSIS
Trigger: AGAAATGGAGCATGGTCTCCATGAAGCCAGAACAGA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS-3UTR TCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCCAATCTCCTTGACATaGGCATCATCAAAATACATC +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCPISLT*ASSKYI
Trigger: GATGTATTTTGATGATGCTCATGTCAAGGAGATTGG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTCCAATCTCCTTGACATaGGCATCATCAAAATACATC +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVPISLT*ASSKYI
Trigger: GATGTATTTTGATGATGCTCATGTCAAGGAGATTGG...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGATAGCTCTCCGTTaGGGAATCTGTTCGAGTGTC +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVGIALR*GICSSV
Trigger: GACACTCGAACAGATTCCTCAACGGAGAGCTATCCC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCTTGGATGTGTGTTTCTaGTTACATTCACTATCAGTC +
Preference number: 4 (lower is better)
Translates to: ISAVEVFERPGSWAECNLLDVCF*LHSLSV
Trigger: GACTGATAGTGAATGTAATCAGAAACACACATCCAA...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
CDS-3UTR TCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTATGCGACTTTGGGATATaGCGCCAGGAAGGAACCAAC +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVCDFGI*RQEGTN
Trigger: GTTGGTTCCTTCCTGGCGTCATATCCCAAAGTCGCA...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAAGGGGAAGGCTGGGCTaGGCTGATGAATTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVRGRLG*ADEFEG
Trigger: TCCTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCT...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGACAGTGAAGCACAAATaGAGAAGCAACAGGCATTAT +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGTVKHK*RSNRHY
Trigger: ATAATGCCTGTTGCTTCTTCATTTGTGCTTCACTGT...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGACAGTGAAGCACAAATaGAGAAGCAACAGGCATTAT +
Preference number: 4 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKTVKHK*RSNRHY
Trigger: ATAATGCCTGTTGCTTCTTCATTTGTGCTTCACTGT...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGACAGTGAAGCACAAATaGAGAAGCAACAGGCATTAT +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWTVKHK*RSNRHY
Trigger: ATAATGCCTGTTGCTTCTTCATTTGTGCTTCACTGT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTACAAACTTCTATCCTTaGAACCTGTACTATCCCTCA +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVTNFYP*NLYYPS
Trigger: TGAGGGATAGTACAGGTTTCAAGGATAGAAGTTTGT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGAATCACAGAACCTTGTaGTATTCACCCAGGAATCCA +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWNHRTL*YSPRNP
Trigger: TGGATTCCTGGGTGAATATCACAAGGTTCTGTGATT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTACAGAGACTCCAATTCTaGGGTCTCCTGCTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVQRLQF*GLLLCV
Trigger: GACACAGAGCAGGAGACCTCAGAATTGGAGTCTCTG...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GTTTCCAAAGGCTTCCTCACGTTTGATGAATCAAAACTGTGGGAAGAAACCGGAAATAACCTTTACCATTaGCTGTGCTGCAGGACTCTA +
Preference number: 4 (lower is better)
Translates to: VSKGFLTFDESKLWEETGNNLYH*LCCRTL
Trigger: TAGAGTCCTGCAGCACAGTCAATGGTAAAGGTTATT...TCCGGTTTCTTCCCACAGTTTTGATTCATCAAACGTGAGGAAGCCTTTGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR TCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGATCTGTTCAAAAGGGTaGATGTTATGTTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWICSKG*MLCWQL
Trigger: GAGCTGCCAACATAACATTCACCCTTTTGAACAGAT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGGATAGGCTGTTCACCTaGTTCTGCAGTTCATCCAAG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGDRLFT*FCSSSK
Trigger: CTTGGATGAACTGCAGAATCAGGTGAACAGCCTATC...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418501.5
CDS-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTCCATAAAGTCCTGGTaGAGTGGATGTAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVSIKSW*SGCNSQ
Trigger: TTGAGAATTACATCCACTTCACCAGGACTTTATGGA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTCCTCCTAGATCAAGATaGCAGAGCCCTCCCTCACTT +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPPPRSR*QSPPSL
Trigger: AAGTGAGGGAGGGCTCTGTCATCTTGATCTAGGAGG...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTGTCGTAGCATGTCCTaGTGTATGACTGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGCRSMS*CMTGTQ
Trigger: CTGAGTTCCAGTCATACAGCAGGACATGCTACGACA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCAGCCTGTTGGTGCTaGTGGATGGTTTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGSACWC*WMVWRH
Trigger: ATGCCTCCAAACCATCCAGCAGCACCAACAGGCTGA...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTATCAGCCTGTTGGTGCTaGTGGATGGTTTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVSACWC*WMVWRH
Trigger: ATGCCTCCAAACCATCCAGCAGCACCAACAGGCTGA...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTTTTCGAATACTGATTTaGAACTTCTTATCGACTAGG +
Preference number: 4 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFFRILI*NFLSTR
Trigger: CCTAGTCGATAAGAAGTTGCAAATCAGTATTCGAAA...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS-3UTR GCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGACCTTGCCTGTGGAATaGAGAGGGTTCAATGTTGTC +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGTLPVE*RGFNVV
Trigger: GACAACATTGAACCCTCTGCATTCCACAGGCAAGGT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGGCTGTTCTTGAGCAATaGCTCTTCCTTCTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGAVLEQ*LFLLVE
Trigger: CTCCACAAGAAGGAAGAGGCATTGCTCAAGAACAGC...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGGACAAGCCCCTTTGTaGTGGGAAACTCTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPGQAPL*WETLAY
Trigger: ATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGGACAAGCCCCTTTGTaGTGGGAAACTCTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGGQAPL*WETLAY
Trigger: ATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTATGCATCCTCTGGAACTaGTCAGCCAGAGAACGGACA +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVCILWN*SARERT
Trigger: TGTCCGTTCTCTGGCTGAGCAGTTCCAGAGGATGCA...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGAGTGGGAGGCATAACTaGTTTGCCTCCAGTCATCAT +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGSGRHN*FASSHH
Trigger: ATGATGACTGGAGGCAAAGCAGTTATGCCTCCCACT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTGCAAAGGGAAGTGGTaGAGATATAATGTACCATCT +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCCKGKW*RYNVPS
Trigger: AGATGGTACATTATATCTCCACCACTTCCCTTTGCA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGATTGCAAAGGGAAGTaGTGGAGATATAATGTACCA +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVDCKGK*WRYNVP
Trigger: TGGTACATTATATCTCCACCACTTCCCTTTGCAATC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGATTGCAAAGGGAAGTaGTGGAGATATAATGTACCA +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCDCKGK*WRYNVP
Trigger: TGGTACATTATATCTCCACCACTTCCCTTTGCAATC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTAATCGTGATAATCTGTaGAGCATTCATCAACACACG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVNRDNL*SIHQHT
Trigger: CGTGTGTTGATGAATGCTCCACAGATTATCACGATT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTAATCGTGATAATCTGTaGAGCATTCATCAACACACG +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCNRDNL*SIHQHT
Trigger: CGTGTGTTGATGAATGCTCCACAGATTATCACGATT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAACAGTTCAGATTGCTTaGCCCGGTCATCCGTCACTC +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVTVQIA*PGHPSL
Trigger: GAGTGACGGATGACCGGGCCAAGCAATCTGAACTGT...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGAGTGTCACTTGAGATaGAGGGCTCCCTCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPECHLR*RAPSLN
Trigger: ATTCAGGGAGGGAGCCCTCCATCTCAAGTGACACTC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTATTTTGACTCACTGCTaGTACTCTCTATTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCILTHC*YSLFPS
Trigger: ACTGGGAAATAGAGAGTACCAGCAGTGAGTCAAAAT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTCAGAGATTCTCGTTTaGGTCTCCATGTGGGACGAT +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGSEILV*VSMWDD
Trigger: ATCGTCCCACATGGAGACCCAAACGAGAATCTCTGA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGAGAAGGTGGCTTGCTTaGTTCATCTGGTATAAATTC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWRRWLA*FIWYKF
Trigger: GAATTTATACCAGATGAACCAAGCAAGCCACCTTCT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGATGCCGGATTCCAGTTaGGCCTCTTGGCTTAACAAT +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGMPDSS*ASWLNN
Trigger: ATTGTTAAGCCAAGAGGCCCAACTGGAATCCGGCAT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGGGTAAACCTTGCCTGTaGAATGCAGAGGGTTCAATG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGGKPCL*NAEGSM
Trigger: CATTGAACCCTCTGCATTCCACAGGCAAGGTTTACC...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTATACAGGGGAAGGCTaGGCTGAGCTGATGAATTTG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGYTGEG*AELMNL
Trigger: CAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTCAAGCCCCTTTGTGCTaGGAAACTCTGGCCTATAGG +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPQAPLC*ETLAYR
Trigger: CCTATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTG...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTACACCCTGCATCCTCTaGAACTGCTCAGCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPTPCIL*NCSARE
Trigger: TTCTCTGGCTGAGCAGTTCCAGAGGATGCAGGGTGT...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTACACCCTGCATCCTCTaGAACTGCTCAGCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGTPCIL*NCSARE
Trigger: TTCTCTGGCTGAGCAGTTCCAGAGGATGCAGGGTGT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTCTCTTGGTATATGTCTaGCTCTGCCAACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGLLVYV*LCQPGL
Trigger: CAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAG...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGATGTGATTTCTCTCTaGATAGGTTACACACGTATG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVDVISL*IGYTRM
Trigger: CATACGTGTGTAACCTATCCAGAGAGAAATCACATC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCTTGGTTCCAATGTaGATGCAAAAGGATGTGATT +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVVLVPM*MQKDVI
Trigger: AATCACATCCTTTTGCATCCACATTGGAACCAAGAC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGGTCTTGGTTCCAATGTaGATGCAAAAGGATGTGATT +
Preference number: 4 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGVLVPM*MQKDVI
Trigger: AATCACATCCTTTTGCATCCACATTGGAACCAAGAC...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGTGTACTTGGCCCCTTaGGAAGTTTCACCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGVYLAP*EVSPLS
Trigger: TGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACAC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGTGTACTTGGCCCCTTaGGAAGTTTCACCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVVYLAP*EVSPLS
Trigger: TGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACAC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTCTGGTCCCAATATGCTaGTTGGTCTCTGACCAGGGT +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGLVPIC*LVSDQG
Trigger: ACCCTGGTCAGAGACCAACCAGCATATTGGGACCAG...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTGGGAGGGTGAATaGAAAAGATCACTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVGWEGE*KRSLQD
Trigger: GTCCTGGAGTGATCTTTTCCATTCACCCTCCCACCC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGAAGACTGCTAGATGGTaGGTACACAGGATGAACAAT +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWKTARW*VHRMNN
Trigger: ATTGTTCATCCTGTGTACCCACCATCTAGCAGTCTT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGACAAAGAGTAGAAGTTaGGAGTATAGTAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWTKSRS*EYSREQ
Trigger: CTGTTCCCTACTATACTCCCAACTTCTACTCTTTGT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGCCCGGTTTCCAAAGGCTTCCTCACGTTTGATGAATCAAAACTGTGGGAAGAAACAAAGAGTAGAAGTTaGGAGTATAGTAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: CPVSKGFLTFDESKLWEETKSRS*EYSREQ
Trigger: CTGTTCCCTACTATACTCCCAACTTCTACTCTTTGT...TTCTTCCCACAGTTTTGATTCATCAAACGTGAGGAAGCCTTTGGAAACCGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAACATTTAGCAGCTCCTaGCGCCGCATACTTAACCGC +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVTFSSS*RRILNR
Trigger: GCGGTTAAGTATGCGGCGCCAGGAGCTGCTAAATGT...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR TCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGGTCATCCGTCACTCTaGAAAACAGATCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPGHPSL*KTDHPA
Trigger: AGCTGGGTGATCTGTTTTTCAGAGTGACGGATGACC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTTGGATGTGTGTTTCTaGTTACATTCACTATCAGTC +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWLDVCF*LHSLSV
Trigger: GACTGATAGTGAATGTAATCAGAAACACACATCCAA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTCTTGCGCTCTATCAGTaGCCCTTTCTTGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPLALYQ*PFLGCV
Trigger: CACACATCCAAGAAAGGGTCACTGATAGAGCGCAAG...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTCTTGCGCTCTATCAGTaGCCCTTTCTTGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGLALYQ*PFLGCV
Trigger: CACACATCCAAGAAAGGGTCACTGATAGAGCGCAAG...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTATAAATTCTTTAGCTaGATCCTCAGAAAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWYKFFS*ILRKGA
Trigger: AGCCCCTTTTCTGAGGATTCAGCTAAAGAATTTATA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAATGAAGCGGCTAGGATaGGGGTTAAACCCTTTCGCT +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVMKRLG*GLNPFA
Trigger: AGCGAAAGGGTTTAACCCTCATCCTAGCCGCTTCAT...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGACAGTGAAGCACAAATaGAGAAGCAACAGGCATTAT +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWTVKHK*RSNRHY
Trigger: ATAATGCCTGTTGCTTCTTCATTTGTGCTTCACTGT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGACAGGATCAGGACAGTaGAGCACAAATGAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGTGSGQ*STNEEA
Trigger: TGCTTCTTCATTTGTGCTTCACTGTCCTGATCCTGT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGACAAACTTCTATCCTTaGAACCTGTACTATCCCTCA +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWTNFYP*NLYYPS
Trigger: TGAGGGATAGTACAGGTTTCAAGGATAGAAGTTTGT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTTTCTCTTGACCCTGTaGGAAAGGAGGCTTAGAATC +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGFLLTL*ERRLRI
Trigger: GATTCTAAGCCTCCTTTCTCACAGGGTCAAGAGAAA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTCACGTATGGGAATCATaGGGGGAGGACTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPHVWES*GEDFIP
Trigger: AGGAATGAAGTCCTCCCCTCATGATTCCCATACGTG...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTACACGTATGGGAATCATaGGGGGAGGACTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVHVWES*GEDFIP
Trigger: AGGAATGAAGTCCTCCCCTCATGATTCCCATACGTG...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTATGCTTCTTATGGACTaGAGATTTTTCCAACTGGAA +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVMLLMD*RFFQLE
Trigger: TTCCAGTTGGAAAAATCTTCAGTCCATAAGAAGCAT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTAAGTGCCACAAAACCTaGAGGGCACTGTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGKCHKT*RALLRK
Trigger: CTTCCTCAACAGTGCCCTGCAGGTTTTGTGGCACTT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAATTTCTGATGGGAAATaGAGTGTTGGGCAGTACATA +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPISDGK*SVGQYI
Trigger: TATGTACTGCCCAACACTGCATTTCCCATCAGAAAT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCTAGTACATACACACTaGTCAAACAATGTCATTGCA +
Preference number: 4 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCLVHTH*SNNVIA
Trigger: TGCAATGACATTGTTTGAGCAGTGTGTATGTACTAG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCTAGTACATACACACTaGTCAAACAATGTCATTGCA +
Preference number: 4 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWLVHTH*SNNVIA
Trigger: TGCAATGACATTGTTTGAGCAGTGTGTATGTACTAG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTAAGTACAGTTCAGATTaGTTGGCCCGGTCATCCGTC +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPKYSSD*LARSSV
Trigger: GACGGATGACCGGGCCAAGCAATCTGAACTGTACTT...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGTCCTGTGTCCCGACTaGTCTGAGACATGGAATCAT +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPVLCPD*SETWNH
Trigger: ATGATTCCATGTCTCAGAGCAGTCGGGACACAGGAC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTGCTGTTCCTCTCACTaGTTTCATAGCCAGATTCCA +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGCCSSH*FHSQIP
Trigger: TGGAATCTGGCTATGAAAGCAGTGAGAGGAACAGCA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAACAGAGAGCCAAAGCTaGAGCACAGTCTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVTESQS*STVSFL
Trigger: CAGAAAGGAGACTGTGCTGCAGCTTTGGCTCTCTGT...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTACAGAGAGCCAAAGCTaGAGCACAGTCTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPTESQS*STVSFL
Trigger: CAGAAAGGAGACTGTGCTGCAGCTTTGGCTCTCTGT...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGAACCTGAAGGCCCTTaGTTCTTTCTGGTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVEPEGP*FFLVVW
Trigger: CCACACTACCAGAAAGAAGCAAGGGCCTTCAGGTTC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTACTCTAGCCCTGATCTaGTCTCTTCTGGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGTLALI*SLLGAS
Trigger: AGATGCTCCCAGAAGAGAGCAGATCAGGGCTAGAGT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTCCATAATTCCCAGCTaGAAACGTTGTTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGSIIPS*KRCSSW
Trigger: CCAGGATGAACAACGTTTCCAGCTGGGAATTATGGA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTCTGCTAAGTCTGAGTaGTCTGAGTCCCATACCAGC +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPSAKSE*SESHTS
Trigger: GCTGGTATGGGACTCAGACCACTCAGACTTAGCAGA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGTTGGTGCTGCTGGATaGTTTGGAGGCATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVVGAAG*FGGISR
Trigger: CCTAGAAATGCCTCCAAACCATCCAGCAGCACCAAC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTAGTGAGAGCCTACATTaGTCTGAGAAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGSESLH*SEKPGM
Trigger: CATCCCTGGCTTCTCAGACCAATGTAGGCTCTCACT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAAGTGAGAGCCTACATTaGTCTGAGAAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVSESLH*SEKPGM
Trigger: CATCCCTGGCTTCTCAGACCAATGTAGGCTCTCACT...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGTTTGGGTCTCCATGTaGGACGATACTTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVVWVSM*DDTCWK
Trigger: CTTCCAGCAAGTATCGTCCCACATGGAGACCCAAAC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCTTGTACTGGGGGCTTaGTCCACCAAATTTAATGTC +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGLVLGA*STKFNV
Trigger: GACATTAAATTTGGTGGACCAAGCCCCCAGTACAAG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAACAGGCATTATGGGGTaGCAGGTTCTATACAGGGGA +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVTGIMG*QVLYRG
Trigger: TCCCCTGTATAGAACCTGCCACCCCATAATGCCTGT...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTACAGGCATTATGGGGTaGCAGGTTCTATACAGGGGA +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGTGIMG*QVLYRG
Trigger: TCCCCTGTATAGAACCTGCCACCCCATAATGCCTGT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTGTGCTGGGAAACTCTaGCCTATAGGTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGCAGKL*PIGLLT
Trigger: AGTGAGGAGACCTATAGGCCAGAGTTTCCCAGCACA...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTCTGTACTATCCCTCATaGAGACACCCTGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGLYYPS*RHPASS
Trigger: AGAGGATGCAGGGTGTCTCCATGAGGGATAGTACAG...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTTGTTGCTTTGCCCATaGCCAGTGGCCTTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGLLLCP*PVAFLL
Trigger: CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAA...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGGATGTGATTTCTCTCTaGATAGGTTACACACGTATG +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWDVISL*IGYTRM
Trigger: CATACGTGTGTAACCTATCCAGAGAGAAATCACATC...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGAGAAGCCTGAAGACTaGCCTGATACAGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPEKPED*PDTETP
Trigger: TGGAGTCTCTGTATCAGGCCAGTCTTCAGGCTTCTC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGAGAAGCCTGAAGACTaGCCTGATACAGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGEKPED*PDTETP
Trigger: TGGAGTCTCTGTATCAGGCCAGTCTTCAGGCTTCTC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTCCTTCCTGTGTACTTaGCCCCTTGGGAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPSFLCT*PLGKFH
Trigger: GTGAAACTTCCCAAGGGGCCAAGTACACAGGAAGGA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTACCTCCAGTCATCATCTaGGGGCATATCTACTCTTCG +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVPPVII*GHIYSS
Trigger: CGAAGAGTAGATATGCCCCCAGATGATGACTGGAGG...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAACAAAGAGTAGAAGTTaGGAGTATAGTAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPTKSRS*EYSREQ
Trigger: CTGTTCCCTACTATACTCCCAACTTCTACTCTTTGT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGACTACCACGACCCCCTaGAAAATAATTTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGTTTTP*KIISLP
Trigger: TGGAAGAGAAATTATTTTTCAGGGGGTCGTGGTAGT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGTTTTCACTACTACACTaGAACTGGTTAAAGATTCCC +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWFSLLH*NWLKIP
Trigger: GGGAATCTTTAACCAGTTTCAGTGTAGTAGTGAAAA...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATTTTCACTACTACACTaGAACTGGTTAAAGATTCCC +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPFSLLH*NWLKIP
Trigger: GGGAATCTTTAACCAGTTTCAGTGTAGTAGTGAAAA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTCAGCAATGTGGAAGTaGATTCTCATCAGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGSAMWK*ILIRRF
Trigger: AAACCTCCTGATGAGAATTCACTTCCACATTGCTGA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTAATGTACCATCTGGATaGAAGGCAGCGGATCAGAAG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGNVPSG*KAADQK
Trigger: CTTCTGATCCGCTGCCTTTCATCCAGATGGTACATT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATTGGATGTGTGTTTCTaGTTACATTCACTATCAGTC +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPLDVCF*LHSLSV
Trigger: GACTGATAGTGAATGTAATCAGAAACACACATCCAA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGTATAAATTCTTTAGCTaGATCCTCAGAAAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWYKFFS*ILRKGA
Trigger: AGCCCCTTTTCTGAGGATTCAGCTAAAGAATTTATA...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTGGAACAGCTGTTCTTaGGCAATGCCTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPWNSCS*AMPLPS
Trigger: AGAAGGAAGAGGCATTGCTCAAGAACAGCTGTTCCA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGAATAACCTTTACCATTaGCTGTGCTGCAGGACTCTA +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGNNLYH*LCCRTL
Trigger: TAGAGTCCTGCAGCACAGTCAATGGTAAAGGTTATT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGCAGCTCACCAAACATaGTTGGTGAAGGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVAAHQT*LVKVSL
Trigger: GAGAGAAACCTTCACCAAGCATGTTTGGTGAGCTGC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGATGTGGGACGATACTTaGTGGAAGAACTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGMWDDT*WKNWIL
Trigger: CAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACAT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTCTGGCCACCTCTTCCTaGAATTCATCCAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGLATSS*NSSSSL
Trigger: AAGTGAACTGGATGAATTGCAGGAAGAGGTGGCCAG...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTCTACAGCTGGCACCATaGAGGGCAAGTCTTAGTTTA +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPLQLAP*RASLSL
Trigger: TAAACTAAGACTTGCCCTGCATGGTGCCAGCTGTAG...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTTTCGAATACTGATTTaGAACTTCTTATCGACTAGG +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVFRILI*NFLSTR
Trigger: CCTAGTCGATAAGAAGTTGCAAATCAGTATTCGAAA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTACCTTGCCTGTGGAATaGAGAGGGTTCAATGTTGTC +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGTLPVE*RGFNVV
Trigger: GACAACATTGAACCCTCTGCATTCCACAGGCAAGGT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGCTTTAGGTAAACCTTaGCTGTGGAATGCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGALGKP*LWNAEG
Trigger: ACCCTCTGCATTCCACAGGCAAGGTTTACCTAAAGC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTAATCTGGTCCCAATATaGTGGTTGGTCTCTGACCAG +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPNLVPI*WLVSDQ
Trigger: CTGGTCAGAGACCAACCAGCATATTGGGACCAGATT...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCAAATTCTGAGCAACTaGAAAAGGTTCCACAAAGCC +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGQILSN*KRFHKA
Trigger: GGCTTTGTGGAACCTTTTGCAGTTGCTCAGAATTTG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTACTCCTCACCCTCTATTaGCTTGTCTCATCATCCTCT +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVLLTLY*LVSSSS
Trigger: AGAGGATGATGAGACAAGGCAATAGAGGGTGAGGAG...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTGGGAAATGCAGTGTTaGGCAGTACATATATCCTCT +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGWEMQC*AVHISS
Trigger: AGAGGATATATGTACTGCCCAACACTGCATTTCCCA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTGGGACGATACTTGCTaGAAGAACTGGATTTTGACT +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGWDDTC*KNWILT
Trigger: AGTCAAAATCCAGTTCTTCCAGCAAGTATCGTCCCA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTCAGAGATTCTCGTTTaGGTCTCCATGTGGGACGAT +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPSEILV*VSMWDD
Trigger: ATCGTCCCACATGGAGACCCAAACGAGAATCTCTGA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTATGCCGGATTCCAGTTaGGCCTCTTGGCTTAACAAT +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPMPDSS*ASWLNN
Trigger: ATTGTTAAGCCAAGAGGCCCAACTGGAATCCGGCAT...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGGTAAACCTTGCCTGTaGAATGCAGAGGGTTCAATG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGGKPCL*NAEGSM
Trigger: CATTGAACCCTCTGCATTCCACAGGCAAGGTTTACC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTATATACAGGGGAAGGCTaGGCTGAGCTGATGAATTTG +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVYTGEG*AELMNL
Trigger: CAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATA...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAAAGTACGCACTGTTCTaGCTTCATGGAGACCATGCT +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVKYALF*LHGDHA
Trigger: AGCATGGTCTCCATGAAGCCAGAACAGTGCGTACTT...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTTGAGGATTGCACCCTaGAGTAGTCAGGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPLRIAP*SSQESG
Trigger: ACCAGATTCCTGACTACTCCAGGGTGCAATCCTCAA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGAAGACTGCTAGATGGTaGGTACACAGGATGAACAAT +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGKTARW*VHRMNN
Trigger: ATTGTTCATCCTGTGTACCCACCATCTAGCAGTCTT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGAGGGGGAATGGAAGTTaGAATTTCAAATATCCCCTC +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGRGNGS*NFKYPL
Trigger: GAGGGGATATTTGAAATTCCAACTTCCATTCCCCCT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGGTAATAGGGATAGGTaGATAAAACAAAGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVGNRDR*IKQRVE
Trigger: TTCTACTCTTTGTTTTATCCACCTATCCCTATTACC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTGGGCCCAATCTCCTTaGCATGAGCATCATCAAAAT +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGWAQSP*HEHHQN
Trigger: ATTTTGATGATGCTCATGTCAAGGAGATTGGGCCCA...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTACAGGATCAGGACAGTaGAGCACAAATGAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPTGSGQ*STNEEA
Trigger: TGCTTCTTCATTTGTGCTTCACTGTCCTGATCCTGT...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTTTCTCTTGACCCTGTaGGAAAGGAGGCTTAGAATC +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGFLLTL*ERRLRI
Trigger: GATTCTAAGCCTCCTTTCTCACAGGGTCAAGAGAAA...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGTTTACATTGACGACTaGGCAAGTGGCAATAATGGC +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPVYIDD*ASGNNG
Trigger: GCCATTATTGCCACTTGCTCAGTCGTCAATGTAAAC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGTTTACATTGACGACTaGGCAAGTGGCAATAATGGC +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGVYIDD*ASGNNG
Trigger: GCCATTATTGCCACTTGCTCAGTCGTCAATGTAAAC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGATTTCTGATGGGAAATaGAGTGTTGGGCAGTACATA +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGISDGK*SVGQYI
Trigger: TATGTACTGCCCAACACTGCATTTCCCATCAGAAAT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTATGCTGTTCCTCTCACTaGTTTCATAGCCAGATTCCA +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVCCSSH*FHSQIP
Trigger: TGGAATCTGGCTATGAAAGCAGTGAGAGGAACAGCA...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTATCCTGCAGGCTCCGTaGTTTTCGAATACTGATTTG +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPILQAP*FSNTDL
Trigger: CAAATCAGTATTCGAAAAGCACGGAGCCTGCAGGAT...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTACACATAGCCAGAAACTaGTGGACACTCCTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVHIARN*WTLLEV
Trigger: AACTTCAAGGAGTGTCCAGCAGTTTCTGGCTATGTG...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGCAGGGTACCAACGCTaGCACAGTAGTTTATTTTGT +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGAGYQR*HSSLFC
Trigger: ACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTAAGGCTGTGTTAGTGTaGCTGACTCCATCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGKAVLV*LTPSVQ
Trigger: TTGAACAGATGGAGTCAGGCACACTAACACAGCCTT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGCGGAGAGTGTCAGATaGAAGCACTTTTTCACTACT +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVAESVR*KHFFTT
Trigger: AGTAGTGAAAAAGTGCTTCCATCTGACACTCTCCGC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATACATATATCCTCTTTaGTTTCATCAGCAATGTGGA +
Preference number: 4 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPYIYPL*FHQQCG
Trigger: TCCACATTGCTGATGAAACCAAAGAGGATATATGTA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGTACATATATCCTCTTTaGTTTCATCAGCAATGTGGA +
Preference number: 4 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWYIYPL*FHQQCG
Trigger: TCCACATTGCTGATGAAACCAAAGAGGATATATGTA...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTCAGTGACCCTTTCTTaGATGTGTGTTTCTGATTAC +
Preference number: 4 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGSVTLS*MCVSDY
Trigger: GTAATCAGAAACACACATCCAAGAAAGGGTCACTGA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAAATGTCGTAAGAAGGTaGCTTGCTTGGTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVNVVRR*LAWFIW
Trigger: CCAGATGAACCAAGCAAGCCACCTTCTTACGACATT...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTCTTGTACTGGGGGCTTaGTCCACCAAATTTAATGTC +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPLVLGA*STKFNV
Trigger: GACATTAAATTTGGTGGACCAAGCCCCCAGTACAAG...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTACTTGTACTGGGGGCTTaGTCCACCAAATTTAATGTC +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVLVLGA*STKFNV
Trigger: GACATTAAATTTGGTGGACCAAGCCCCCAGTACAAG...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTTGAGGCTTTGGCCTTaGAGGCATTGGTTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPLRLWP*RHWLVF
Trigger: GAAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTATTGAGGCTTTGGCCTTaGAGGCATTGGTTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVLRLWP*RHWLVF
Trigger: GAAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAA...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGAAGTTTTGAGGCTTTaGCCTTGGAGGCATTGGTTA +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPEVLRL*PWRHWL
Trigger: TAACCAATGCCTCCAAGGCCAAAGCCTCAAAACTTC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGAAGTTTTGAGGCTTTaGCCTTGGAGGCATTGGTTA +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVEVLRL*PWRHWL
Trigger: TAACCAATGCCTCCAAGGCCAAAGCCTCAAAACTTC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGAGAAGAATGTTCAGTaGACTCTTCCCAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVEKNVQ*TLPRKV
Trigger: CACTTTCCTGGGAAGAGTCCACTGAACATTCTTCTC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAACTGTTCTGGCTTCATaGAGACCATGCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVTVLAS*RPCSIS
Trigger: AGAAATGGAGCATGGTCTCCATGAAGCCAGAACAGT...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTACTTGAAGTTCTGTTCTaGCTTCATGGAGACCATGCT +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVLEVLF*LHGDHA
Trigger: AGCATGGTCTCCATGAAGCCAGAACAGAACTTCAAG...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAATAGCCAGAAACTGCTaGACACTCCTTGAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVIARNC*TLLEVL
Trigger: CAGAACTTCAAGGAGTGTCCAGCAGTTTCTGGCTAT...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS-3UTR TCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCAGCAATGTGGAAGTaGATTCTCATCAGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGSAMWK*ILIRRF
Trigger: AAACCTCCTGATGAGAATTCACTTCCACATTGCTGA...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGTCATTGCAAATTTCTaGTGGGAAATGCAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPVIANF*WEMQCW
Trigger: CCAACACTGCATTTCCCATCAGAAATTTGCAATGAC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAAATCACAGAACCTTGTaGTATTCACCCAGGAATCCA +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVNHRTL*YSPRNP
Trigger: TGGATTCCTGGGTGAATATCACAAGGTTCTGTGATT...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTAATAACCTTTACCATTaGCTGTGCTGCAGGACTCTA +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGNNLYH*LCCRTL
Trigger: TAGAGTCCTGCAGCACAGTCAATGGTAAAGGTTATT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTCCACCAATTCTATGTTaGGATGAGAATAGCACAACC +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPPPILC*DENSTT
Trigger: GGTTGTGCTATTCTCATCTCAACATAGAATTGGTGG...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAATCTGTTCAAAAGGGTaGATGTTATGTTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVICSKG*MLCWQL
Trigger: GAGCTGCCAACATAACATTCACCCTTTTGAACAGAT...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTATGTGGGACGATACTTaGTGGAAGAACTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPMWDDT*WKNWIL
Trigger: CAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACAT...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTAAACGTTGTTCATCCTaGAAAGTCTTTGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGKRCSS*KVFARA
Trigger: TGCTCTGGCAAAGACTTTCCAGGATGAACAACGTTT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTATGGGAAATGCAGTGTTaGGCAGTACATATATCCTCT +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVWEMQC*AVHISS
Trigger: AGAGGATATATGTACTGCCCAACACTGCATTTCCCA...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTAGGGATGGTCTGTTATaGATCATATTGCTGACTGTC +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPRDGLL*IILLTV
Trigger: GACAGTCAGCAATATGATCCATAACAGACCATCCCT...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAAGGGATGGTCTGTTATaGATCATATTGCTGACTGTC +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVRDGLL*IILLTV
Trigger: GACAGTCAGCAATATGATCCATAACAGACCATCCCT...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTACTGAGAAGCCAGGGATaGTCTGTTATGGATCATATT +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVLRSQG*SVMDHI
Trigger: AATATGATCCATAACAGACCATCCCTGGCTTCTCAG...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTCTGAGAAGCCAGGGATaGTCTGTTATGGATCATATT +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPLRSQG*SVMDHI
Trigger: AATATGATCCATAACAGACCATCCCTGGCTTCTCAG...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTATTCTTTCTGGTAGTGTaGCAGTGTAGGTTAGTTGAG +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVFFLVV*QCRLVE
Trigger: CTCAACTAACCTACACTGCCACACTACCAGAAAGAA...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTTCTTTCTGGTAGTGTaGCAGTGTAGGTTAGTTGAG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGFFLVV*QCRLVE
Trigger: CTCAACTAACCTACACTGCCACACTACCAGAAAGAA...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTAAGACTGCTAGATGGTaGGTACACAGGATGAACAAT +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGKTARW*VHRMNN
Trigger: ATTGTTCATCCTGTGTACCCACCATCTAGCAGTCTT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTAGGGGGAATGGAAGTTaGAATTTCAAATATCCCCTC +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGRGNGS*NFKYPL
Trigger: GAGGGGATATTTGAAATTCCAACTTCCATTCCCCCT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTCCAATCTCCTTGACATaGGCATCATCAAAATACATC +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGPISLT*ASSKYI
Trigger: GATGTATTTTGATGATGCTCATGTCAAGGAGATTGG...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTCCAATCTCCTTGACATaGGCATCATCAAAATACATC +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPPISLT*ASSKYI
Trigger: GATGTATTTTGATGATGCTCATGTCAAGGAGATTGG...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAACAAACTTCTATCCTTaGAACCTGTACTATCCCTCA +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVTNFYP*NLYYPS
Trigger: TGAGGGATAGTACAGGTTTCAAGGATAGAAGTTTGT...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTATGCAAAGGGAAGTGGTaGAGATATAATGTACCATCT +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVCKGKW*RYNVPS
Trigger: AGATGGTACATTATATCTCCACCACTTCCCTTTGCA...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGATTGCAAAGGGAAGTaGTGGAGATATAATGTACCA +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGDCKGK*WRYNVP
Trigger: TGGTACATTATATCTCCACCACTTCCCTTTGCAATC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGATGTGATTTCTCTCTaGATAGGTTACACACGTATG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGDVISL*IGYTRM
Trigger: CATACGTGTGTAACCTATCCAGAGAGAAATCACATC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGTCTTGGTTCCAATGTaGATGCAAAAGGATGTGATT +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVVLVPM*MQKDVI
Trigger: AATCACATCCTTTTGCATCCACATTGGAACCAAGAC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTACAAAGAGTAGAAGTTaGGAGTATAGTAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGTKSRS*EYSREQ
Trigger: CTGTTCCCTACTATACTCCCAACTTCTACTCTTTGT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTATAAATTCTTTAGCTaGATCCTCAGAAAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPYKFFS*ILRKGA
Trigger: AGCCCCTTTTCTGAGGATTCAGCTAAAGAATTTATA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGTGCTTTTCGAATACTaGTTTGCAACTTCTTATCGA +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGVLFEY*FATSYR
Trigger: TCGATAAGAAGTTGCAAATCAGTATTCGAAAAGCAC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR TCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAATGCTTCTTATGGACTaGAGATTTTTCCAACTGGAA +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVMLLMD*RFFQLE
Trigger: TTCCAGTTGGAAAAATCTTCAGTCCATAAGAAGCAT...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS-3UTR GCA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTTTCGAATACTGATTTaGAACTTCTTATCGACTAGG +
Preference number: 4 (lower is better)
Translates to: WKLEFQISPPKESHLFRGFRILI*NFLSTR
Trigger: CCTAGTCGATAAGAAGTTGCAAATCAGTATTCGAAA...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTACATATATCCTCTTTaGTTTCATCAGCAATGTGGA +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPYIYPL*FHQQCG
Trigger: TCCACATTGCTGATGAAACCAAAGAGGATATATGTA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGTAATAGGGATAGGTaGATAAAACAAAGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVGNRDR*IKQRVE
Trigger: TTCTACTCTTTGTTTTATCCACCTATCCCTATTACC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CCA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGGTAATAGGGATAGGTaGATAAAACAAAGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPGNRDR*IKQRVE
Trigger: TTCTACTCTTTGTTTTATCCACCTATCCCTATTACC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS GCA 90 bp AGAGTCCCCGCCTGTGTTGGGAGGCAGGCTGAGGGCTGCGACGGCTaGTGTGGTGATTGCTGCTGCTGCATGCGATCCTGCAGGCTCCGT +
Preference number: 5 (lower is better)
Translates to: RVPACVGRQAEGCDG*CGDCCCCMRSCRLR
Trigger: ACGGAGCCTGCAGGATCGCATGCAGCAGCAGCAATCACCACAGCAGCCGTCGCAGCCCTCAGCCTGCCTCCCAACACAGGCGGGGACTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 90 bp GTTGGGAGGCAGGCTGAGGGCTGCGACGGCTGCTGTGGTGATTGCTaGTGCTGCATGCGATCCTGCAGGCTCCGTGCTTTTCGAATACTG +
Preference number: 5 (lower is better)
Translates to: VGRQAEGCDGCCGDC*CCMRSCRLRAFRIL
Trigger: CAGTATTCGAAAAGCACGGAGCCTGCAGGATCGCATGCAGCAGCAGCAATCACCACAGCAGCCGTCGCAGCCCTCAGCCTGCCTCCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 90 bp GGCTGGAGTGTGGCAGTGCCATCACGGCTCACTGCAGCCTTGACCTaGCGGGCTAACCGATTCTTCCACCCAAGCCTCCTAAGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: GWSVAVPSRLTAALT*RANRFFHPSLLSSW
Trigger: CCAGCTACTTAGGAGGCTTGGGTGGAAGAATCGGTTAGCCCGGCAGGTCAAGGCTGCAGTGAGCCGTGATGGCACTGCCACACTCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498143.5
CDS-3UTR CAA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCAATCTGCAGAGCCTGTTaGGCTAAGTGGGTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPICRAC*AKWVPG
Trigger: GCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGAT...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS GCA 90 bp GGGAGGCAGGCTGAGGGCTGCGACGGCTGCTGTGGTGATTGCTGCTaGTGCATGCGATCCTGCAGGCTCCGTGCTTTTCGAATACTGATT +
Preference number: 5 (lower is better)
Translates to: GRQAEGCDGCCGDCC*CMRSCRLRAFRILI
Trigger: AATCAGTATTCGAAAAGCACGGAGCCTGCAGGATCGCATGCAGCAGCAGCAATCACCACAGCAGCCGTCGCAGCCCTCAGCCTGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 90 bp TGTGTTGGGAGGCAGGCTGAGGGCTGCGACGGCTGCTGTGGTGATTaGTGCTGCTGCATGCGATCCTGCAGGCTCCGTGCTTTTCGAATA +
Preference number: 5 (lower is better)
Translates to: CVGRQAEGCDGCCGD*CCCMRSCRLRAFRI
Trigger: TATTCGAAAAGCACGGAGCCTGCAGGATCGCATGCAGCAGCAGCAATCACCACAGCAGCCGTCGCAGCCCTCAGCCTGCCTCCCAACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTTTTGCCCTGGCTCATaGCTGAGGCCTTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRFCPGS*LRPLLG
Trigger: CCCCAGCAAAGGCCTCAGCAATGAGCCAGGGCAAAA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCCGACCAGAGCTCCTCTaGCGCTCTATCAGTGACCCT +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRRPELL*RSISDP
Trigger: AGGGTCACTGATAGAGCGCAAGAGGAGCTCTGGTCG...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACGCTGGGCCCCAGCGCTaGTACTGGGGGCTTGGTCCA +
Preference number: 5 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNAGPQR*YWGLGP
Trigger: TGGACCAAGCCCCCAGTACAAGCGCTGGGGCCCAGC...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTGCTGGGCCCCAGCGCTaGTACTGGGGGCTTGGTCCA +
Preference number: 5 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPAGPQR*YWGLGP
Trigger: TGGACCAAGCCCCCAGTACAAGCGCTGGGGCCCAGC...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCATCTGCAGAGCCTGTTaGGCTAAGTGGGTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRICRAC*AKWVPG
Trigger: GCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGAT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGTCCCAATATGCTGGTaGGTCTCTGACCAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRVPICW*VSDQGA
Trigger: GGCACCCTGGTCAGAGACCAACCAGCATATTGGGAC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS GCA 90 bp AGGCAGGCTGAGGGCTGCGACGGCTGCTGTGGTGATTGCTGCTGCTaGATGCGATCCTGCAGGCTCCGTGCTTTTCGAATACTGATTTGC +
Preference number: 5 (lower is better)
Translates to: RQAEGCDGCCGDCCC*MRSCRLRAFRILIC
Trigger: GCAAATCAGTATTCGAAAAGCACGGAGCCTGCAGGATCGCATGCAGCAGCAGCAATCACCACAGCAGCCGTCGCAGCCCTCAGCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTCATTGCTGAGGCCTTaGCTGGGGGCTATGGAGGTT +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRSLLRP*LGAMEV
Trigger: AACCTCCATAGCCCCCAGCAAAGGCCTCAGCAATGA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGCTGTTCGAGTGTCACTaGAGATGGAGGGCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLLFECH*RWRAPS
Trigger: GGAGGGAGCCCTCCATCTCAAGTGACACTCGAACAG...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGCGACCAGAGCTCCTCTaGCGCTCTATCAGTGACCCT +
Preference number: 5 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLRPELL*RSISDP
Trigger: AGGGTCACTGATAGAGCGCAAGAGGAGCTCTGGTCG...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
CDS-3UTR CAA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCAAGAAAGGCTGACTCTTaGTCCAGCCACCCATGGATG +
Preference number: 5 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPRKADS*SSHPWM
Trigger: CATCCATGGGTGGCTGGACAAAGAGTCAGCCTTTCT...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCATCTTGTGGAGGGAGCTaGCTGCAACTGCTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPSCGGS*LQLLLS
Trigger: TGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAGA...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp GCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCAAATGCCTCTTCCTTCTaGTGGAGGGAGCTTGCTGCA +
Preference number: 5 (lower is better)
Translates to: AEPVWLSGCQAVSCCPHPNASSF*WRELAA
Trigger: TGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGCATT...TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGTTCCTGGGAGTCTATaGGGCTCCCCTGCCATGGTG +
Preference number: 5 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPVPGSL*GSPAMV
Trigger: CACCATGGCAGGGGAGCCCAATAGACTCCCAGGAAC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTGTGTACTTGGCCCCTaGGGAAGTTTCACCCCTGTC +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRCVLGP*GSFTPV
Trigger: GACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS TCA 90 bp TTGCCCTGGCTCATTGCTGAGGCCTTTGCTGGGGGCTATGGAGGTTaGGCTTCGAGGTGCAAACATCCCTTGTACACTACCACGACCCCC +
Preference number: 5 (lower is better)
Translates to: LPWLIAEAFAGGYGG*ASRCKHPLYTTTTP
Trigger: GGGGGTCGTGGTAGTGTACAAGGGATGTTTGCACCTCGAAGCTCAACCTCCATAGCCCCCAGCAAAGGCCTCAGCAATGAGCCAGGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000413442.5
ENST00000422491.7
ENST00000433394.1
ENST00000451492.5
ENST00000461520.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 90 bp AGATGGAGGGCTCCCTCCCTGAATCTTCACTGTCGTAGCATGTCCTaGTGTATGACTGGAACTCAGCTTGGGGAGGCAGGTCCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: RWRAPSLNLHCRSMS*CMTGTQLGEAGPGW
Trigger: CCACCCAGGACCTGCCTCCCCAAGCTGAGTTCCAGTCATACAGCAGGACATGCTACGACAGTGAAGATTCAGGGAGGGAGCCCTCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATTCTTGTGGAGGGAGCTaGCTGCAACTGCTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHSCGGS*LQLLLS
Trigger: TGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAGA...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTCTTGTGGAGGGAGCTaGCTGCAACTGCTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRSCGGS*LQLLLS
Trigger: TGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAGA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCAATGCCTCTTCCTTCTaGTGGAGGGAGCTTGCTGCA +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRNASSF*WRELAA
Trigger: TGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGCATT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGGACAGGAACTGTGGTaGGGGAAGGTAGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPGQELW*GKVELG
Trigger: CCCCAACTCTACCTTCCCCAACCACAGTTCCTGTCC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CAA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATGTCCTTCCTGTGTACTaGGCCCCTTGGGAAGTTTCA +
Preference number: 5 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHVLPVY*APWEVS
Trigger: TGAAACTTCCCAAGGGGCCAAGTACACAGGAAGGAC...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCGTCCCAATATGCTGGTaGGTCTCTGACCAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: WNCSARERTSPFVLGNSGVPICW*VSDQGA
Trigger: GGCACCCTGGTCAGAGACCAACCAGCATATTGGGAC...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGGAGGCATAACTGCTTaGCCTCCAGTCATCATCTGG +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRGGITA*PPVIIW
Trigger: CCAGATGATGACTGGAGGCAAAGCAGTTATGCCTCC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS GCA 90 bp TCCAGCCACCCATGGATGCTGTGGAGTCTACCTCCAGGATGCTACTaGTGTGCGACTTTGGGATATGACGCCAGGAAGGAACCAACCCAG +
Preference number: 5 (lower is better)
Translates to: SSHPWMLWSLPPGCY*CATLGYDARKEPTQ
Trigger: CTGGGTTGGTTCCTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGTAGCATCCTGGAGGTAGACTCCACAGCATCCATGGGTGGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 90 bp AAGAGCCTGGCTGCTCACCTGAATCTTCACTGTCGTAGCATGTCCTaGTGTATGACTGGAACTCAGCTTGGGGAGGCAGGTCCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: KSLAAHLNLHCRSMS*CMTGTQLGEAGPGW
Trigger: CCACCCAGGACCTGCCTCCCCAAGCTGAGTTCCAGTCATACAGCAGGACATGCTACGACAGTGAAGATTCAGGTGAGCAGCCAGGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461520.5
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGCTCACCAAACATGCTaGGTGAAGGTTTCTCTCGTC +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRAHQTC*VKVSLV
Trigger: GACGAGAGAAACCTTCACCAAGCATGTTTGGTGAGC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTGCCCCTTGATGCATTaGGTCACCACATCCTTCCAT +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRCPLMH*VTTSFH
Trigger: ATGGAAGGATGTGGTGACCAAATGCATCAAGGGGCA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCAGGGATAGCTCTCCGTaGAGGAATCTGTTCGAGTGT +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRRDSSP*RNLFEC
Trigger: ACACTCGAACAGATTCCTCAACGGAGAGCTATCCCT...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTGCTGGGCCCCAGCGCTaGTACTGGGGGCTTGGTCCA +
Preference number: 5 (lower is better)
Translates to: SWPRCPMLKLRITEPCDIAGPQR*YWGLGP
Trigger: TGGACCAAGCCCCCAGTACAAGCGCTGGGGCCCAGC...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCGAGAGGATTGTTGCTTaGCCCATGGCCAGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: WNCSARERTSPFVLGNSGERIVA*PMASGL
Trigger: AAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTC...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGATCTGCAGAGCCTGTTaGGCTAAGTGGGTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKICRAC*AKWVPG
Trigger: GCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGAT...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGCAGGGTGCCCAGGAGTaGTCTGTTCTGGAGCGATGG +
Preference number: 5 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKQGAQE*SVLERW
Trigger: CCATCGCTCCAGAACAGACAACTCCTGGGCACCCTG...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACCAGGGTGCCCAGGAGTaGTCTGTTCTGGAGCGATGG +
Preference number: 5 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNQGAQE*SVLERW
Trigger: CCATCGCTCCAGAACAGACAACTCCTGGGCACCCTG...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS GCA 90 bp CTCCTCACCAGAGAAAGGCTGACTCTTTGTCCAGCCACCCATGGATaGTGTGGAGTCTACCTCCAGGATGCTACTGCTGTGCGACTTTGG +
Preference number: 5 (lower is better)
Translates to: LLTRERLTLCPATHG*CGVYLQDATAVRLW
Trigger: CCAAAGTCGCACAGCAGTAGCATCCTGGAGGTAGACTCCACAGCATCCATGGGTGGCTGGACAAAGAGTCAGCCTTTCTCTGGTGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTCCCAGCTGGAAACGTaGTTCATCCTGGAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRSQLET*FILESL
Trigger: AAGACTTTCCAGGATGAACAACGTTTCCAGCTGGGA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGATCCTCTCTCCACAGTaGCTTGGACAGTTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLILSPQ*LGQFRR
Trigger: TCTGCGGAACTGTCCAAGCAACTGTGGAGAGAGGAT...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CAA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTACAGTTCAGATTGCTaGGCCCGGTCATCCGTCACT +
Preference number: 5 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPYSSDC*ARSSVT
Trigger: AGTGACGGATGACCGGGCCAAGCAATCTGAACTGTA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGCTGTTCGAGTGTCACTaGAGATGGAGGGCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKLFECH*RWRAPS
Trigger: GGAGGGAGCCCTCCATCTCAAGTGACACTCGAACAG...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGTTCAGAGATTCTCGTTaGGGTCTCCATGTGGGACGA +
Preference number: 5 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLFRDSR*GLHVGR
Trigger: TCGTCCCACATGGAGACCCAAACGAGAATCTCTGAA...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGTACTGCTGTGCGACTTaGGGATATGACGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRYCCAT*GYDARK
Trigger: CTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGTA...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCAGAAAGGCTGACTCTTaGTCCAGCCACCCATGGATG +
Preference number: 5 (lower is better)
Translates to: WNCSARERTSPFVLGNSGRKADS*SSHPWM
Trigger: CATCCATGGGTGGCTGGACAAAGAGTCAGCCTTTCT...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGAGTCCCCGCCTGTGTaGGGAGGCAGGCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWESPPV*GGRLRA
Trigger: AGCCCTCAGCCTGCCTCCCAACACAGGCGGGGACTC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTTGCTGCAACTGCTGTaGTCACACCTAGAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPLLQLL*SHLEPC
Trigger: GCAAGGCTCTAGGTGTGACAACAGCAGTTGCAGCAA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCTTGTGGAGGGAGCTaGCTGCAACTGCTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPSCGGS*LQLLLS
Trigger: TGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAGA...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGACCCTCCAGAGAGGATaGTTGCTTTGCCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: RNLVPICWLVSDQGAQELTLQRG*LLCPWP
Trigger: TGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGT...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp TCTGCAGAGCCTGTTTGGCTAAGTGGGTGCCAGGCGGTATCCTGCTGCCCCCATCCTAACATCTCTCACTaGGGACAGCTTCTCTTGGTA +
Preference number: 5 (lower is better)
Translates to: SAEPVWLSGCQAVSCCPHPNISH*GQLLLV
Trigger: TACCAAGAGAAGCTGTCCCAAGTGAGAGATGTTAGG...ATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCATCTGCAGAGCCTGTTaGGCTAAGTGGGTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFICRAC*AKWVPG
Trigger: GCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGAT...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCGCTCCATTTCTGCTGTaGAAGTCTTTGAGAGACCAG +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRAPFLL*KSLRDQ
Trigger: CTGGTCTCTCAAAGACTTCAACAGCAGAAATGGAGC...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGTTGGGGAAGGTAGAGTaGGGGACCGAGGAGAAACAC +
Preference number: 5 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKLGKVE*GTEEKH
Trigger: GTGTTTCTCCTCGGTCCCCAACTCTACCTTCCCCAA...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTGGACAGGAACTGTGGTaGGGGAAGGTAGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPGQELW*GKVELG
Trigger: CCCCAACTCTACCTTCCCCAACCACAGTTCCTGTCC...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGTGTGTACTTGGCCCCTaGGGAAGTTTCACCCCTGTC +
Preference number: 5 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKCVLGP*GSFTPV
Trigger: GACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACA...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGGTCCTTCCTGTGTACTaGGCCCCTTGGGAAGTTTCA +
Preference number: 5 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPVLPVY*APWEVS
Trigger: TGAAACTTCCCAAGGGGCCAAGTACACAGGAAGGAC...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS GCA 90 bp TCTTTGTCCAGCCACCCATGGATGCTGTGGAGTCTACCTCCAGGATaGTACTGCTGTGCGACTTTGGGATATGACGCCAGGAAGGAACCA +
Preference number: 5 (lower is better)
Translates to: SLSSHPWMLWSLPPG*YCCATLGYDARKEP
Trigger: TGGTTCCTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGTAGCATCCTGGAGGTAGACTCCACAGCATCCATGGGTGGCTGGACAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 90 bp GGCTGCGACGGCTGCTGTGGTGATTGCTGCTGCTGCATGCGATCCTaGAGGCTCCGTGCTTTTCGAATACTGATTTGCAACTTCTTATCG +
Preference number: 5 (lower is better)
Translates to: GCDGCCGDCCCCMRS*RLRAFRILICNFLS
Trigger: CGATAAGAAGTTGCAAATCAGTATTCGAAAAGCACGGAGCCTGCAGGATCGCATGCAGCAGCAGCAATCACCACAGCAGCCGTCGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 90 bp CACTATCAGTCAGGTGTCCTGAATCTTCACTGTCGTAGCATGTCCTaGTGTATGACTGGAACTCAGCTTGGGGAGGCAGGTCCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: HYQSGVLNLHCRSMS*CMTGTQLGEAGPGW
Trigger: CCACCCAGGACCTGCCTCCCCAAGCTGAGTTCCAGTCATACAGCAGGACATGCTACGACAGTGAAGATTCAGGACACCTGACTGATAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497106.5
CDS-3UTR CAA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGTGGGGGCTATGGAGGTaGAGCTTCGAGGTGCAAACA +
Preference number: 5 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKWGLWR*SFEVQT
Trigger: TGTTTGCACCTCGAAGCTCAACCTCCATAGCCCCCA...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTGGTTAAAGATTCCCTaGAGAGCGCAAAAGATGCAG +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRWLKIP*RAQKMQ
Trigger: CTGCATCTTTTGCGCTCTCAAGGGAATCTTTAACCA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGTGCCCCTTGATGCATTaGGTCACCACATCCTTCCAT +
Preference number: 5 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRCPLMH*VTTSFH
Trigger: ATGGAAGGATGTGGTGACCAAATGCATCAAGGGGCA...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
CDS-3UTR CAA 90 bp AGATGCGACGTAAATTCTCTGCACTGTACTGCTCATCCTCCCCACACTCCCTGCGTGCTGCTGGATGGTTaGGAGGCATTTCTAGGAGCC +
Preference number: 5 (lower is better)
Translates to: RCDVNSLHCTAHPPHTPCVLLDG*EAFLGA
Trigger: GGCTCCTAGAAATGCCTCCAAACCATCCAGCAGCAC...GCAGGGAGTGTGGGGAGGATGAGCAGTACAGTGCAGAGAATTTACGTCGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR CAA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGAAATCTCTCAGCCTGTaGGTGCTGCTGGATGGTTTG +
Preference number: 5 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRKSLSL*VLLDGL
Trigger: CAAACCATCCAGCAGCACCAACAGGCTGAGAGATTT...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTGGAAGAACTGGATTTaGACTCACTGCTGGTACTCT +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRWKNWI*THCWYS
Trigger: AGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCCA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCCATGTGGGACGATACTaGCTGGAAGAACTGGATTTT +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRHVGRY*LEELDF
Trigger: AAAATCCAGTTCTTCCAGCAAGTATCGTCCCACATG...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGCTGGGCCCCAGCGCTaGTACTGGGGGCTTGGTCCA +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPAGPQR*YWGLGP
Trigger: TGGACCAAGCCCCCAGTACAAGCGCTGGGGCCCAGC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACGATCCCTGTAGACATTaGAGCTCTCAGGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNDPCRH*SSQAGL
Trigger: CAGCCCTGCCTGAGAGCTCAAATGTCTACAGGGATC...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTGATCCCTGTAGACATTaGAGCTCTCAGGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPDPCRH*SSQAGL
Trigger: CAGCCCTGCCTGAGAGCTCAAATGTCTACAGGGATC...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGTACTGCTGTGCGACTTaGGGATATGACGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: KQQALWGGRFYTGEGWAEYCCAT*GYDARK
Trigger: CTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGTA...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTGTCACACCTAGAGCCTaGCAGCTTACCCTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFVTPRA*QLTLWG
Trigger: GCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGAC...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGTTGCTGCAACTGCTGTaGTCACACCTAGAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKLLQLL*SHLEPC
Trigger: GCAAGGCTCTAGGTGTGACAACAGCAGTTGCAGCAA...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGTTGCTGCAACTGCTGTaGTCACACCTAGAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: KQQALWGGRFYTGEGWAELLQLL*SHLEPC
Trigger: GCAAGGCTCTAGGTGTGACAACAGCAGTTGCAGCAA...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGGCTGAGCTGATGAATTaGAAGGACTACAGCCTAGGC +
Preference number: 5 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLAELMN*KDYSLG
Trigger: GCCTAGGCTGTAGTCCTTCAAATTCATCAGCTCAGC...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCTTTGAGGCTTTGGCCTaGGAGGCATTGGTTAGTTTT +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRFEALA*EALVSF
Trigger: AAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAAA...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTGAGAGGATTGTTGCTTaGCCCATGGCCAGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPERIVA*PMASGL
Trigger: AAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTC...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGACCCTCCAGAGAGGATaGTTGCTTTGCCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKTLQRG*LLCPWP
Trigger: TGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCTTGGGACAGCTTCTCTaGGTATATGTCTGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: WNCSARERTSPFVLGNSGLGQLL*VYVWLC
Trigger: GCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAA...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp AAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGCTCCTGCTCTGTGTCTaGGTTCCAATGTGGATGCAA +
Preference number: 5 (lower is better)
Translates to: KQFSCLSLPSSWDYRHAPLLLCV*VPMWMQ
Trigger: TTGCATCCACATTGGAACCAAGACACAGAGCAGGAG...CGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAATTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGCTCCTGCTCTGTGTCTaGGTTCCAATGTGGATGCAA +
Preference number: 5 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRLLLCV*VPMWMQ
Trigger: TTGCATCCACATTGGAACCAAGACACAGAGCAGGAG...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGTCCAGAACAGCCAGCTaGAGAAGCCTGAAGACTGGC +
Preference number: 5 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKSRTAS*RSLKTG
Trigger: GCCAGTCTTCAGGCTTCTCAAGCTGGCTGTTCTGGA...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTATTGGGGAAGGTAGAGTaGGGGACCGAGGAGAAACAC +
Preference number: 5 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVLGKVE*GTEEKH
Trigger: GTGTTTCTCCTCGGTCCCCAACTCTACCTTCCCCAA...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp GTCTGTTCTGGAGCGATGGGGGAGGCTCTGGTAGTTCAAAGTCCTTCCTGTGTATGTGTACTTGGCCCCTaGGGAAGTTTCACCCCTGTC +
Preference number: 5 (lower is better)
Translates to: VCSGAMGEALVVQSPSCVCVLGP*GSFTPV
Trigger: GACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACA...TACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGTCACCCTCTATTGCCTaGTCTCATCATCCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLSPSIA*SHHPLK
Trigger: CTTCAGAGGATGATGAGACAAGGCAATAGAGGGTGA...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS TCA 90 bp GTGGAGTCTACCTCCAGGATGCTACTGCTGTGCGACTTTGGGATATaGCGCCAGGAAGGAACCAACCCAGCTGATCTCTTAGCACTTGGA +
Preference number: 5 (lower is better)
Translates to: VESTSRMLLLCDFGI*RQEGTNPADLLALG
Trigger: TCCAAGTGCTAAGAGATCAGCTGGGTTGGTTCCTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGTAGCATCCTGGAGGTAGACTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS TCA 90 bp GCTGCTGCTGCATGCGATCCTGCAGGCTCCGTGCTTTTCGAATACTaGTTTGCAACTTCTTATCGACTAGGGCTCTGCTGTGCGTGCTAC +
Preference number: 5 (lower is better)
Translates to: AAAACDPAGSVLFEY*FATSYRLGLCCACY
Trigger: GTAGCACGCACAGCAGAGCCCTAGTCGATAAGAAGTTGCAAATCAGTATTCGAAAAGCACGGAGCCTGCAGGATCGCATGCAGCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 90 bp CAGTTGCTTGGACAGTTCCGCAGATCCCCCATGGTGCTGGCATTCTaGAGCAGCTCACCAAACATGCTTGGTGAAGGTTTCTCTCGTCTT +
Preference number: 5 (lower is better)
Translates to: QLLGQFRRSPMVLAF*SSSPNMLGEGFSRL
Trigger: AAGACGAGAGAAACCTTCACCAAGCATGTTTGGTGAGCTGCTGCAGAATGCCAGCACCATGGGGGATCTGCGGAACTGTCCAAGCAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000461520.5
ENST00000492357.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 90 bp TCTCTCCACAGTTGCTTGGACAGTTCCGCAGATCCCCCATGGTGCTaGCATTCTGCAGCAGCTCACCAAACATGCTTGGTGAAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: SLHSCLDSSADPPWC*HSAAAHQTCLVKVS
Trigger: AGAAACCTTCACCAAGCATGTTTGGTGAGCTGCTGCAGAATGCCAGCACCATGGGGGATCTGCGGAACTGTCCAAGCAACTGTGGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000461520.5
ENST00000492357.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 90 bp CACCAGAGAAAGGCTGACTCTTTGTCCAGCCACCCATGGATGCTGTaGAGTCTACCTCCAGGATGCTACTGCTGTGCGACTTTGGGATAT +
Preference number: 5 (lower is better)
Translates to: HQRKADSLSSHPWML*SLPPGCYCCATLGY
Trigger: ATATCCCAAAGTCGCACAGCAGTAGCATCCTGGAGGTAGACTCCACAGCATCCATGGGTGGCTGGACAAAGAGTCAGCCTTTCTCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 90 bp ATATCTCCTCACCAGAGAAAGGCTGACTCTTTGTCCAGCCACCCATaGATGCTGTGGAGTCTACCTCCAGGATGCTACTGCTGTGCGACT +
Preference number: 5 (lower is better)
Translates to: ISPHQRKADSLSSHP*MLWSLPPGCYCCAT
Trigger: AGTCGCACAGCAGTAGCATCCTGGAGGTAGACTCCACAGCATCCATGGGTGGCTGGACAAAGAGTCAGCCTTTCTCTGGTGAGGAGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 90 bp CTGGCCCCAAACTCTGTATCCATGCCGGATTCCAGTTGGGCCTCTTaGCTTAACAATACTTGGAGCGGGATAGGCTGTTCACTTGTTGGC +
Preference number: 5 (lower is better)
Translates to: LAPNSVSMPDSSWAS*LNNTWSGIGCSLVG
Trigger: GCCAACAAGTGAACAGCCTATCCCGCTCCAAGTATTGTTAAGCCAAGAGGCCCAACTGGAATCCGGCATGGATACAGAGTTTGGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGTACAGTTCAGATTGCTaGGCCCGGTCATCCGTCACT +
Preference number: 5 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKYSSDC*ARSSVT
Trigger: AGTGACGGATGACCGGGCCAAGCAATCTGAACTGTA...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGACCACATCCTTCCATTaGGGCCCAATCTCCTTGACA +
Preference number: 5 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKTTSFH*GPISLT
Trigger: TGTCAAGGAGATTGGGCCCAAATGGAAGGATGTGGT...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
CDS-3UTR CAA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGCTGTTCGAGTGTCACTaGAGATGGAGGGCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWLFECH*RWRAPS
Trigger: GGAGGGAGCCCTCCATCTCAAGTGACACTCGAACAG...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGGTCCTAGGAGGTTTTTaGTCAGGCTGGTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKVLGGF*SGWSPP
Trigger: AGGAGGAGACCAGCCTGACAAAAAACCTCCTAGGAC...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGTCCTAGGAGGTTTTTaGTCAGGCTGGTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFVLGGF*SGWSPP
Trigger: AGGAGGAGACCAGCCTGACAAAAAACCTCCTAGGAC...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp GGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGTGGAAGAACTGGATTTaGACTCACTGCTGGTACTCT +
Preference number: 5 (lower is better)
Translates to: GAYLLFEDQGFGTLEQDLWKNWI*THCWYS
Trigger: AGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCCA...CAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGTTGCTGCAACTGCTGTaGTCACACCTAGAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKLLQLL*SHLEPC
Trigger: GCAAGGCTCTAGGTGTGACAACAGCAGTTGCAGCAA...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGTCTTGTGGAGGGAGCTaGCTGCAACTGCTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKSCGGS*LQLLLS
Trigger: TGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAGA...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGGAGAGGATTGTTGCTTaGCCCATGGCCAGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRERIVA*PMASGL
Trigger: AAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTC...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TGGAACTGCTCAGCCAGAGAACGGACAAGCCCCTTTGTGCTGGGAAACTCTGGCCCTAACATCTCTCACTaGGGACAGCTTCTCTTGGTA +
Preference number: 5 (lower is better)
Translates to: WNCSARERTSPFVLGNSGPNISH*GQLLLV
Trigger: TACCAAGAGAAGCTGTCCCAAGTGAGAGATGTTAGG...GCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGCCTAACATCTCTCACTaGGGACAGCTTCTCTTGGTA +
Preference number: 5 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLPNISH*GQLLLV
Trigger: TACCAAGAGAAGCTGTCCCAAGTGAGAGATGTTAGG...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGTCCAGAACAGCCAGCTaGAGAAGCCTGAAGACTGGC +
Preference number: 5 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRSRTAS*RSLKTG
Trigger: GCCAGTCTTCAGGCTTCTCAAGCTGGCTGTTCTGGA...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGCTGCTGTTGAAGTCTTaGAGAGACCAGGATCATGGG +
Preference number: 5 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKLLLKS*RDQDHG
Trigger: CCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAG...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGCTGCTGTTGAAGTCTTaGAGAGACCAGGATCATGGG +
Preference number: 5 (lower is better)
Translates to: RNLVPICWLVSDQGAQELLLLKS*RDQDHG
Trigger: CCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAG...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGCTCCATTTCTGCTGTaGAAGTCTTTGAGAGACCAG +
Preference number: 5 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRAPFLL*KSLRDQ
Trigger: CTGGTCTCTCAAAGACTTCAACAGCAGAAATGGAGC...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGACTGCTGGACACTCCTaGAAGTTCCTGGGAGTCTAT +
Preference number: 5 (lower is better)
Translates to: RNLVPICWLVSDQGAQELTAGHS*KFLGVY
Trigger: ATAGACTCCCAGGAACTTCAAGGAGTGTCCAGCAGT...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGACTGCTGGACACTCCTaGAAGTTCCTGGGAGTCTAT +
Preference number: 5 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKTAGHS*KFLGVY
Trigger: ATAGACTCCCAGGAACTTCAAGGAGTGTCCAGCAGT...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTGTCCTTCCTGTGTACTaGGCCCCTTGGGAAGTTTCA +
Preference number: 5 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPVLPVY*APWEVS
Trigger: TGAAACTTCCCAAGGGGCCAAGTACACAGGAAGGAC...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTGTCCCAATATGCTGGTaGGTCTCTGACCAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFVPICW*VSDQGA
Trigger: GGCACCCTGGTCAGAGACCAACCAGCATATTGGGAC...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTGTCCCAATATGCTGGTaGGTCTCTGACCAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: VSTAAQILRPNISHLGQLVPICW*VSDQGA
Trigger: GGCACCCTGGTCAGAGACCAACCAGCATATTGGGAC...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGGGAGGCATAACTGCTTaGCCTCCAGTCATCATCTGG +
Preference number: 5 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKGGITA*PPVIIW
Trigger: CCAGATGATGACTGGAGGCAAAGCAGTTATGCCTCC...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGAGGGTGAATGTTATGTaGGCAGCTCCGCATTCTAGG +
Preference number: 5 (lower is better)
Translates to: RNLVPICWLVSDQGAQELRVNVM*AAPHSR
Trigger: CCTAGAATGCGGAGCTGCCAACATAACATTCACCCT...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS GCA 90 bp TGCTGCATGCGATCCTGCAGGCTCCGTGCTTTTCGAATACTGATTTaGAACTTCTTATCGACTAGGGCTCTGCTGTGCGTGCTACAGCTG +
Preference number: 5 (lower is better)
Translates to: CCMRSCRLRAFRILI*NFLSTRALLCVLQL
Trigger: CAGCTGTAGCACGCACAGCAGAGCCCTAGTCGATAAGAAGTTGCAAATCAGTATTCGAAAAGCACGGAGCCTGCAGGATCGCATGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 90 bp CTGGCCCCAAACTCTGTATCCATGCCGGATTCCAGTTGGGCCTCTTaGCTTAACAATACTTGGAGCGGGATAGGCTGTTCACCTGATTCT +
Preference number: 5 (lower is better)
Translates to: LAPNSVSMPDSSWAS*LNNTWSGIGCSPDS
Trigger: AGAATCAGGTGAACAGCCTATCCCGCTCCAAGTATTGTTAAGCCAAGAGGCCCAACTGGAATCCGGCATGGATACAGAGTTTGGGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418501.5
ENST00000497106.5
CDS-3UTR CAA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTTCATTGCTGAGGCCTTaGCTGGGGGCTATGGAGGTT +
Preference number: 5 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFSLLRP*LGAMEV
Trigger: AACCTCCATAGCCCCCAGCAAAGGCCTCAGCAATGA...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000680396.1
CDS-3UTR CAA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTCATCCTGGAAAGTCTTaGCCAGAGCACTGCGGAGAG +
Preference number: 5 (lower is better)
Translates to: VSTAAQILRPNISHLGQLHPGKS*PEHCGE
Trigger: CTCTCCGCAGTGCTCTGGCAAAGACTTTCCAGGATG...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR CAA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGACCACATCCTTCCATTaGGGCCCAATCTCCTTGACA +
Preference number: 5 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKTTSFH*GPISLT
Trigger: TGTCAAGGAGATTGGGCCCAAATGGAAGGATGTGGT...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CAA 90 bp ACTTGGGACAGCTTCTCTTGGTATATGTCTGGCTCTGCCAACCTGGGCTGTCCTTGCCCCTTGATGCATTaGGTCACCACATCCTTCCAT +
Preference number: 5 (lower is better)
Translates to: TWDSFSWYMSGSANLGCPCPLMH*VTTSFH
Trigger: ATGGAAGGATGTGGTGACCAAATGCATCAAGGGGCA...AGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CAA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGAGGGATAGCTCTCCGTaGAGGAATCTGTTCGAGTGT +
Preference number: 5 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKRDSSP*RNLFEC
Trigger: ACACTCGAACAGATTCCTCAACGGAGAGCTATCCCT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGCATGTGGGACGATACTaGCTGGAAGAACTGGATTTT +
Preference number: 5 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRHVGRY*LEELDF
Trigger: AAAATCCAGTTCTTCCAGCAAGTATCGTCCCACATG...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCTTCAGAGATTCTCGTTaGGGTCTCCATGTGGGACGA +
Preference number: 5 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFFRDSR*GLHVGR
Trigger: TCGTCCCACATGGAGACCCAAACGAGAATCTCTGAA...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGTTCAGAGATTCTCGTTaGGGTCTCCATGTGGGACGA +
Preference number: 5 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKFRDSR*GLHVGR
Trigger: TCGTCCCACATGGAGACCCAAACGAGAATCTCTGAA...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGTCACACCTAGAGCCTaGCAGCTTACCCTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWVTPRA*QLTLWG
Trigger: GCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGAC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTGTCACACCTAGAGCCTaGCAGCTTACCCTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISVTPRA*QLTLWG
Trigger: GCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGAC...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGAATGCCTCTTCCTTCTaGTGGAGGGAGCTTGCTGCA +
Preference number: 5 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRNASSF*WRELAA
Trigger: TGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGCATT...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGCTGAGCTGATGAATTaGAAGGACTACAGCCTAGGC +
Preference number: 5 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFAELMN*KDYSLG
Trigger: GCCTAGGCTGTAGTCCTTCAAATTCATCAGCTCAGC...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGGCTGAGCTGATGAATTaGAAGGACTACAGCCTAGGC +
Preference number: 5 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKAELMN*KDYSLG
Trigger: GCCTAGGCTGTAGTCCTTCAAATTCATCAGCTCAGC...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGTTGGCCTTGGAGGCATaGGTTAGTTTTCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKLALEA*VSFLHR
Trigger: CCTGTGCAGAAAACTAACCAATGCCTCCAAGGCCAA...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGTTGGCCTTGGAGGCATaGGTTAGTTTTCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKLALEA*VSFLHR
Trigger: CCTGTGCAGAAAACTAACCAATGCCTCCAAGGCCAA...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGTTTGAGGCTTTGGCCTaGGAGGCATTGGTTAGTTTT +
Preference number: 5 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRFEALA*EALVSF
Trigger: AAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAAA...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCATCTGCAGAGCCTGTTaGGCTAAGTGGGTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: ISAVEVFERPGSWAECNLICRAC*AKWVPG
Trigger: GCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGAT...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCGGACAGGAACTGTGGTaGGGGAAGGTAGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: ISAVEVFERPGSWAECNLGQELW*GKVELG
Trigger: CCCCAACTCTACCTTCCCCAACCACAGTTCCTGTCC...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTGTTCCTGGGAGTCTATaGGGCTCCCCTGCCATGGTG +
Preference number: 5 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISVPGSL*GSPAMV
Trigger: CACCATGGCAGGGGAGCCCAATAGACTCCCAGGAAC...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TGCCCGGTTTCCAAAGGCTTCCTCACGTTTGATGAATCAAAACTGTGGGAAGAAGTTCCTGGGAGTCTATaGGGCTCCCCTGCCATGGTG +
Preference number: 5 (lower is better)
Translates to: CPVSKGFLTFDESKLWEEVPGSL*GSPAMV
Trigger: CACCATGGCAGGGGAGCCCAATAGACTCCCAGGAAC...TTCTTCCCACAGTTTTGATTCATCAAACGTGAGGAAGCCTTTGGAAACCGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR CAA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGACTGCTGGACACTCCTaGAAGTTCCTGGGAGTCTAT +
Preference number: 5 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKTAGHS*KFLGVY
Trigger: ATAGACTCCCAGGAACTTCAAGGAGTGTCCAGCAGT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCAGGGTGCCCAGGAGTaGTCTGTTCTGGAGCGATGG +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCQGAQE*SVLERW
Trigger: CCATCGCTCCAGAACAGACAACTCCTGGGCACCCTG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGCAGGGTGCCCAGGAGTaGTCTGTTCTGGAGCGATGG +
Preference number: 5 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKQGAQE*SVLERW
Trigger: CCATCGCTCCAGAACAGACAACTCCTGGGCACCCTG...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCAGGGTGCCCAGGAGTaGTCTGTTCTGGAGCGATGG +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWQGAQE*SVLERW
Trigger: CCATCGCTCCAGAACAGACAACTCCTGGGCACCCTG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGGGAGGCATAACTGCTTaGCCTCCAGTCATCATCTGG +
Preference number: 5 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRGGITA*PPVIIW
Trigger: CCAGATGATGACTGGAGGCAAAGCAGTTATGCCTCC...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGAGGGTGAATGTTATGTaGGCAGCTCCGCATTCTAGG +
Preference number: 5 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKRVNVM*AAPHSR
Trigger: CCTAGAATGCGGAGCTGCCAACATAACATTCACCCT...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGAGGGTGAATGTTATGTaGGCAGCTCCGCATTCTAGG +
Preference number: 5 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKRVNVM*AAPHSR
Trigger: CCTAGAATGCGGAGCTGCCAACATAACATTCACCCT...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCAGGGTGAATGTTATGTaGGCAGCTCCGCATTCTAGG +
Preference number: 5 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFRVNVM*AAPHSR
Trigger: CCTAGAATGCGGAGCTGCCAACATAACATTCACCCT...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGAAGGCTTCCTCACGTTaGATGAATCCTGAGAAGTAC +
Preference number: 5 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRKASSR*MNPEKY
Trigger: GTACTTCTCAGGATTCATCAAACGTGAGGAAGCCTT...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418501.5
ENST00000424265.5
CDS-3UTR CAA 90 bp TTCTCCTGCCTCAGCCTTCCGAGTAGTTGGGACTACAGGCACGCACCGTCACGCCATCTGAGGTTTTTGTaGATGTTCTTGCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: FSCLSLPSSWDYRHAPSRHLRFL*MFLLLL
Trigger: AAGAAGCAGCAAGAACATCAACAAAAACCTCAGATG...GCGTGACGGTGCGTGCCTGTAGTCCCAACTACTCGGAAGGCTGAGGCAGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS GCA 90 bp TTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACTaGTGGACACTCCTTGAAGTTCTGTTCTGGCTTCATGGAGACCAT +
Preference number: 5 (lower is better)
Translates to: LAPWEVSPLSHIARN*WTLLEVLFWLHGDH
Trigger: ATGGTCTCCATGAAGCCAGAACAGAACTTCAAGGAGTGTCCAGCAGTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS CCA 90 bp AGGCAGGTTCCCAGGCTGTGGATAACATCTTCTGCTAAGTCTGAGTaGTCTGAGTCCCATACCAGCCCAATCGTGATAATCTGTGGAGCA +
Preference number: 5 (lower is better)
Translates to: RQVPRLWITSSAKSE*SESHTSPIVIICGA
Trigger: TGCTCCACAGATTATCACGATTGGGCTGGTATGGGACTCAGACCACTCAGACTTAGCAGAAGATGTTATCCACAGCCTGGGAACCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000461520.5
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTAGGTGCAAACATCCCTaGTACACTACCACGACCCCC +
Preference number: 5 (lower is better)
Translates to: SWPRCPMLKLRITEPCDIRCKHP*YTTTTP
Trigger: GGGGGTCGTGGTAGTGTACAAGGGATGTTTGCACCT...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR CAA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCATCATTGCTGAGGCCTTaGCTGGGGGCTATGGAGGTT +
Preference number: 5 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPSLLRP*LGAMEV
Trigger: AACCTCCATAGCCCCCAGCAAAGGCCTCAGCAATGA...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTTTTGCCCTGGCTCATaGCTGAGGCCTTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCFCPGS*LRPLLG
Trigger: CCCCAGCAAAGGCCTCAGCAATGAGCCAGGGCAAAA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCTGTTCGAGTGTCACTaGAGATGGAGGGCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCLFECH*RWRAPS
Trigger: GGAGGGAGCCCTCCATCTCAAGTGACACTCGAACAG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGCGACCAGAGCTCCTCTaGCGCTCTATCAGTGACCCT +
Preference number: 5 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGRPELL*RSISDP
Trigger: AGGGTCACTGATAGAGCGCAAGAGGAGCTCTGGTCG...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCGACCAGAGCTCCTCTaGCGCTCTATCAGTGACCCT +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCRPELL*RSISDP
Trigger: AGGGTCACTGATAGAGCGCAAGAGGAGCTCTGGTCG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCGTGCTGCTGGATGGTTaGGAGGCATTTCTAGGAGCC +
Preference number: 5 (lower is better)
Translates to: ISAVEVFERPGSWAECNLVLLDG*EAFLGA
Trigger: GGCTCCTAGAAATGCCTCCAAACCATCCAGCAGCAC...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGAAATCTCTCAGCCTGTaGGTGCTGCTGGATGGTTTG +
Preference number: 5 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRKSLSL*VLLDGL
Trigger: CAAACCATCCAGCAGCACCAACAGGCTGAGAGATTT...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTGTCCTAGGAGGTTTTTaGTCAGGCTGGTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFVLGGF*SGWSPP
Trigger: AGGAGGAGACCAGCCTGACAAAAAACCTCCTAGGAC...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp CCCACCCTCCAGAGAGGATTGTTGCTTTGCCCATGGCCAGTGGCCTTTCTCTTGCCACAGTGCTTCCTTTaGTCCTTACTAAAGATACTG +
Preference number: 5 (lower is better)
Translates to: PTLQRGLLLCPWPVAFLLPQCFL*SLLKIL
Trigger: CAGTATCTTTAGTAAGGACAAAAGGAAGCACTGTGG...CAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTGATCCCTGTAGACATTaGAGCTCTCAGGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: SWPRCPMLKLRITEPCDIDPCRH*SSQAGL
Trigger: CAGCCCTGCCTGAGAGCTCAAATGTCTACAGGGATC...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGAGAAAGGCTGACTCTTaGTCCAGCCACCCATGGATG +
Preference number: 5 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWRKADS*SSHPWM
Trigger: CATCCATGGGTGGCTGGACAAAGAGTCAGCCTTTCT...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTAGAAAGGCTGACTCTTaGTCCAGCCACCCATGGATG +
Preference number: 5 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFRKADS*SSHPWM
Trigger: CATCCATGGGTGGCTGGACAAAGAGTCAGCCTTTCT...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGTCACACCTAGAGCCTaGCAGCTTACCCTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPVTPRA*QLTLWG
Trigger: GCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGAC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGAACGGACAAGCCCCTTaGTGCTGGGAAACTCTGGCC +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWNGQAP*CWETLA
Trigger: GGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTACCCTCCAGAGAGGATaGTTGCTTTGCCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: SWPRCPMLKLRITEPCDITLQRG*LLCPWP
Trigger: TGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGT...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCACCCTCCAGAGAGGATaGTTGCTTTGCCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: ISAVEVFERPGSWAECNLTLQRG*LLCPWP
Trigger: TGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGT...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGCCTAACATCTCTCACTaGGGACAGCTTCTCTTGGTA +
Preference number: 5 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKPNISH*GQLLLV
Trigger: TACCAAGAGAAGCTGTCCCAAGTGAGAGATGTTAGG...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTATCTGCAGAGCCTGTTaGGCTAAGTGGGTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVICRAC*AKWVPG
Trigger: GCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGAT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCTGATGAATTTGAAGGCTCCATTTCTGCTGTaGAAGTCTTTGAGAGACCAG +
Preference number: 5 (lower is better)
Translates to: WGGRFYTGEGWAELMNLKAPFLL*KSLRDQ
Trigger: CTGGTCTCTCAAAGACTTCAACAGCAGAAATGGAGC...CTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCATGTGTACTTGGCCCCTaGGGAAGTTTCACCCCTGTC +
Preference number: 5 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPCVLGP*GSFTPV
Trigger: GACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACA...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCTGTGTACTTGGCCCCTaGGGAAGTTTCACCCCTGTC +
Preference number: 5 (lower is better)
Translates to: ISAVEVFERPGSWAECNLCVLGP*GSFTPV
Trigger: GACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACA...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGTCCCAATATGCTGGTaGGTCTCTGACCAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCVPICW*VSDQGA
Trigger: GGCACCCTGGTCAGAGACCAACCAGCATATTGGGAC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTCCTCCTCACCCTCTATaGCCTTGTCTCATCATCCTC +
Preference number: 5 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFPPHPL*PCLIIL
Trigger: GAGGATGATGAGACAAGGCAATAGAGGGTGAGGAGG...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS-3UTR CAA 90 bp CTACTCTTCGAGGACCAGGGGTTCGGGACCCTGGAACAGGATCTGAATTCCAAGAGGATTTGTGCCTTTTaGGCAGGAATTTCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: LLFEDQGFGTLEQDLNSKRICAF*AGISVC
Trigger: GCAGACAGAAATTCCTGCCAAAAAGGCACAAATCCT...CTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS TCA 90 bp AGAGATAATAGCAAAGGCCATCCCTCCACTTGTCTCAGCCATGCCTaGAAGCCCCAAGTAGGTGGCTCACATTGCTGCAAGAGACAATGT +
Preference number: 5 (lower is better)
Translates to: RDNSKGHPSTCLSHA*KPQVGGSHCCKRQC
Trigger: ACATTGTCTCTTGCAGCAATGTGAGCCACCTACTTGGGGCTTTCAGGCATGGCTGAGACAAGTGGAGGGATGGCCTTTGCTATTATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480210.1
CDS CCA 90 bp AAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGATTCCAGTTaGGCCTCTTGGCTTAACAATACTTGGAGCGGGATAGGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: KKELAPNSVSMPDSS*ASWLNNTWSGIGCS
Trigger: TGAACAGCCTATCCCGCTCCAAGTATTGTTAAGCCAAGAGGCCCAACTGGAATCCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 90 bp GTATCCATGCCGGATTCCAGTTGGGCCTCTTGGCTTAACAATACTTaGAGCGGGATAGGCTGTTCACCTGATTCTGCAGTTCATCCAAGT +
Preference number: 5 (lower is better)
Translates to: VSMPDSSWASWLNNT*SGIGCSPDSAVHPS
Trigger: ACTTGGATGAACTGCAGAATCAGGTGAACAGCCTATCCCGCTCCAAGTATTGTTAAGCCAAGAGGCCCAACTGGAATCCGGCATGGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418501.5
ENST00000497106.5
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTAGGTGCAAACATCCCTaGTACACTACCACGACCCCC +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCRCKHP*YTTTTP
Trigger: GGGGGTCGTGGTAGTGTACAAGGGATGTTTGCACCT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTCATTGCTGAGGCCTTaGCTGGGGGCTATGGAGGTT +
Preference number: 5 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVSLLRP*LGAMEV
Trigger: AACCTCCATAGCCCCCAGCAAAGGCCTCAGCAATGA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGTTTTGCCCTGGCTCATaGCTGAGGCCTTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWFCPGS*LRPLLG
Trigger: CCCCAGCAAAGGCCTCAGCAATGAGCCAGGGCAAAA...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTGCTCACCAAACATGCTaGGTGAAGGTTTCTCTCGTC +
Preference number: 5 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFAHQTC*VKVSLV
Trigger: GACGAGAGAAACCTTCACCAAGCATGTTTGGTGAGC...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000680396.1
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTCTCTCCACAGTTGCTaGGACAGTTCCGCAGATCCC +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCSLHSC*DSSADP
Trigger: GGGATCTGCGGAACTGTCCAAGCAACTGTGGAGAGA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTTCTCTCCACAGTTGCTaGGACAGTTCCGCAGATCCC +
Preference number: 5 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISSLHSC*DSSADP
Trigger: GGGATCTGCGGAACTGTCCAAGCAACTGTGGAGAGA...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CAA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTCTCTCCACAGTTGCTaGGACAGTTCCGCAGATCCC +
Preference number: 5 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVSLHSC*DSSADP
Trigger: GGGATCTGCGGAACTGTCCAAGCAACTGTGGAGAGA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTAGGGATAGCTCTCCGTaGAGGAATCTGTTCGAGTGT +
Preference number: 5 (lower is better)
Translates to: VSTAAQILRPNISHLGQLRDSSP*RNLFEC
Trigger: ACACTCGAACAGATTCCTCAACGGAGAGCTATCCCT...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGCTGCTGGATGGTTaGGAGGCATTTCTAGGAGCC +
Preference number: 5 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVVLLDG*EAFLGA
Trigger: GGCTCCTAGAAATGCCTCCAAACCATCCAGCAGCAC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGGTGCTGCTGGATGGTTaGGAGGCATTTCTAGGAGCC +
Preference number: 5 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKVLLDG*EAFLGA
Trigger: GGCTCCTAGAAATGCCTCCAAACCATCCAGCAGCAC...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp GTCAGTACTGCTGCCCAGATCCTTAGACCTAACATCTCTCACTTGGGACAGCTTAAATCTCTCAGCCTGTaGGTGCTGCTGGATGGTTTG +
Preference number: 5 (lower is better)
Translates to: VSTAAQILRPNISHLGQLKSLSL*VLLDGL
Trigger: CAAACCATCCAGCAGCACCAACAGGCTGAGAGATTT...AAGCTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACTGGAAGAACTGGATTTaGACTCACTGCTGGTACTCT +
Preference number: 5 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNWKNWI*THCWYS
Trigger: AGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCCA...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp CCTGTGTACTTGGCCCCTTGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACCATGTGGGACGATACTaGCTGGAAGAACTGGATTTT +
Preference number: 5 (lower is better)
Translates to: PVYLAPWEVSPLSHIARNHVGRY*LEELDF
Trigger: AAAATCCAGTTCTTCCAGCAAGTATCGTCCCACATG...GTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp AAGCAACAGGCATTATGGGGTGGCAGGTTCTATACAGGGGAAGGCTGGGCTGAGCCACAGTGCTTCCTTTaGTCCTTACTAAAGATACTG +
Preference number: 5 (lower is better)
Translates to: KQQALWGGRFYTGEGWAEPQCFL*SLLKIL
Trigger: CAGTATCTTTAGTAAGGACAAAAGGAAGCACTGTGG...CTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp AGGAATCTGGTCCCAATATGCTGGTTGGTCTCTGACCAGGGTGCCCAGGAGTTGCCACAGTGCTTCCTTTaGTCCTTACTAAAGATACTG +
Preference number: 5 (lower is better)
Translates to: RNLVPICWLVSDQGAQELPQCFL*SLLKIL
Trigger: CAGTATCTTTAGTAAGGACAAAAGGAAGCACTGTGG...CAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGCTGGGCCCCAGCGCTaGTACTGGGGGCTTGGTCCA +
Preference number: 5 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPAGPQR*YWGLGP
Trigger: TGGACCAAGCCCCCAGTACAAGCGCTGGGGCCCAGC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGCTGGGCCCCAGCGCTaGTACTGGGGGCTTGGTCCA +
Preference number: 5 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVAGPQR*YWGLGP
Trigger: TGGACCAAGCCCCCAGTACAAGCGCTGGGGCCCAGC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGATCCCTGTAGACATTaGAGCTCTCAGGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVDPCRH*SSQAGL
Trigger: CAGCCCTGCCTGAGAGCTCAAATGTCTACAGGGATC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCTACTGCTGTGCGACTTaGGGATATGACGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: ISAVEVFERPGSWAECNLYCCAT*GYDARK
Trigger: CTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGTA...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGAGTCCCCGCCTGTGTaGGGAGGCAGGCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPESPPV*GGRLRA
Trigger: AGCCCTCAGCCTGCCTCCCAACACAGGCGGGGACTC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339859.8
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTTCTTGTGGAGGGAGCTaGCTGCAACTGCTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: SWPRCPMLKLRITEPCDISCGGS*LQLLLS
Trigger: TGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAGA...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTGCTGAGCTGATGAATTaGAAGGACTACAGCCTAGGC +
Preference number: 5 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFAELMN*KDYSLG
Trigger: GCCTAGGCTGTAGTCCTTCAAATTCATCAGCTCAGC...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGAACGGACAAGCCCCTTaGTGCTGGGAAACTCTGGCC +
Preference number: 5 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWNGQAP*CWETLA
Trigger: GGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAAACGGACAAGCCCCTTaGTGCTGGGAAACTCTGGCC +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPNGQAP*CWETLA
Trigger: GGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGAGAGGATTGTTGCTTaGCCCATGGCCAGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWERIVA*PMASGL
Trigger: AAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGAGAGGATTGTTGCTTaGCCCATGGCCAGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCERIVA*PMASGL
Trigger: AAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTACCCTCCAGAGAGGATaGTTGCTTTGCCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCTLQRG*LLCPWP
Trigger: TGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGTTGGGACAGCTTCTCTaGGTATATGTCTGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWLGQLL*VYVWLC
Trigger: GCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAA...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTCCAGAACAGCCAGCTaGAGAAGCCTGAAGACTGGC +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWSRTAS*RSLKTG
Trigger: GCCAGTCTTCAGGCTTCTCAAGCTGGCTGTTCTGGA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGCCCGGTTTCCAAAGGCTTCCTCACGTTTGATGAATCAAAACTGTGGGAAGAATCCAGAACAGCCAGCTaGAGAAGCCTGAAGACTGGC +
Preference number: 5 (lower is better)
Translates to: CPVSKGFLTFDESKLWEESRTAS*RSLKTG
Trigger: GCCAGTCTTCAGGCTTCTCAAGCTGGCTGTTCTGGA...TTCTTCCCACAGTTTTGATTCATCAAACGTGAGGAAGCCTTTGGAAACCGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTCCAGAACAGCCAGCTaGAGAAGCCTGAAGACTGGC +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCSRTAS*RSLKTG
Trigger: GCCAGTCTTCAGGCTTCTCAAGCTGGCTGTTCTGGA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTTGGGGAAGGTAGAGTaGGGGACCGAGGAGAAACAC +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWLGKVE*GTEEKH
Trigger: GTGTTTCTCCTCGGTCCCCAACTCTACCTTCCCCAA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGGACAGGAACTGTGGTaGGGGAAGGTAGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPGQELW*GKVELG
Trigger: CCCCAACTCTACCTTCCCCAACCACAGTTCCTGTCC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CAA 90 bp TCCTGGCCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTGTCCTTCCTGTGTACTaGGCCCCTTGGGAAGTTTCA +
Preference number: 5 (lower is better)
Translates to: SWPRCPMLKLRITEPCDIVLPVY*APWEVS
Trigger: TGAAACTTCCCAAGGGGCCAAGTACACAGGAAGGAC...AATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCAGGAGGCATAACTGCTTaGCCTCCAGTCATCATCTGG +
Preference number: 5 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPGGITA*PPVIIW
Trigger: CCAGATGATGACTGGAGGCAAAGCAGTTATGCCTCC...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTAGGGTGAATGTTATGTaGGCAGCTCCGCATTCTAGG +
Preference number: 5 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFRVNVM*AAPHSR
Trigger: CCTAGAATGCGGAGCTGCCAACATAACATTCACCCT...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS TCA 90 bp CTCCTCTTGCGCTCTATCAGTGACCCTTTCTTGGATGTGTGTTTCTaGTTACATTCACTATCAGTCAGGTGTCCTGTGTCCCGACTGCTC +
Preference number: 5 (lower is better)
Translates to: LLLRSISDPFLDVCF*LHSLSVRCPVSRLL
Trigger: GAGCAGTCGGGACACAGGACACCTGACTGATAGTGAATGTAATCAGAAACACACATCCAAGAAAGGGTCACTGATAGAGCGCAAGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 90 bp ATGTGGGACGATACTTGCTGGAAGAACTGGATTTTGACTCACTGCTaGTACTCTCTATTTCCCAGTCACGAGAGTGTAAAGGCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: MWDDTCWKNWILTHC*YSLFPSHESVKAGS
Trigger: GGACCCTGCCTTTACACTCTCGTGACTGGGAAATAGAGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000480210.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGAGGTGCAAACATCCCTaGTACACTACCACGACCCCC +
Preference number: 5 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWRCKHP*YTTTTP
Trigger: GGGGGTCGTGGTAGTGTACAAGGGATGTTTGCACCT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCACATCCTGGAAAGTCTTaGCCAGAGCACTGCGGAGAG +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPHPGKS*PEHCGE
Trigger: CTCTCCGCAGTGCTCTGGCAAAGACTTTCCAGGATG...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCGGGCTCAAACAATGTCATaGCAAATTTCTGATGGGAAA +
Preference number: 5 (lower is better)
Translates to: CLQSSSGGISTLRGPGVRAQTMS*QISDGK
Trigger: TTTCCCATCAGAAATTTGCAATGACATTGTTTGAGC...CCGAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000680396.1
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTATCCTCTCTCCACAGTaGCTTGGACAGTTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCILSPQ*LGQFRR
Trigger: TCTGCGGAACTGTCCAAGCAACTGTGGAGAGAGGAT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGTACAGTTCAGATTGCTaGGCCCGGTCATCCGTCACT +
Preference number: 5 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKYSSDC*ARSSVT
Trigger: AGTGACGGATGACCGGGCCAAGCAATCTGAACTGTA...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CAA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCACCACATCCTTCCATTaGGGCCCAATCTCCTTGACA +
Preference number: 5 (lower is better)
Translates to: ISAVEVFERPGSWAECNLTTSFH*GPISLT
Trigger: TGTCAAGGAGATTGGGCCCAAATGGAAGGATGTGGT...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CAA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCTGCCCCTTGATGCATTaGGTCACCACATCCTTCCAT +
Preference number: 5 (lower is better)
Translates to: ISAVEVFERPGSWAECNLCPLMH*VTTSFH
Trigger: ATGGAAGGATGTGGTGACCAAATGCATCAAGGGGCA...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000424265.5
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGTGCTGCTGGATGGTTaGGAGGCATTTCTAGGAGCC +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPVLLDG*EAFLGA
Trigger: GGCTCCTAGAAATGCCTCCAAACCATCCAGCAGCAC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCAAAATCTCTCAGCCTGTaGGTGCTGCTGGATGGTTTG +
Preference number: 5 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPKSLSL*VLLDGL
Trigger: CAAACCATCCAGCAGCACCAACAGGCTGAGAGATTT...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCCTAGGAGGTTTTTaGTCAGGCTGGTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVVLGGF*SGWSPP
Trigger: AGGAGGAGACCAGCCTGACAAAAAACCTCCTAGGAC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTTGCCTCCAGTCATCATCTGGGGGCATATCTACTCTTCGAGGACCAGGGGTTCCCACAGTGCTTCCTTTaGTCCTTACTAAAGATACTG +
Preference number: 5 (lower is better)
Translates to: FASSHHLGAYLLFEDQGFPQCFL*SLLKIL
Trigger: CAGTATCTTTAGTAAGGACAAAAGGAAGCACTGTGG...GAACCCCTGGTCCTCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTACTGCTGTGCGACTTaGGGATATGACGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCYCCAT*GYDARK
Trigger: CTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGTA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTAGAAAGGCTGACTCTTaGTCCAGCCACCCATGGATG +
Preference number: 5 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVRKADS*SSHPWM
Trigger: CATCCATGGGTGGCTGGACAAAGAGTCAGCCTTTCT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGAGAAAGGCTGACTCTTaGTCCAGCCACCCATGGATG +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWRKADS*SSHPWM
Trigger: CATCCATGGGTGGCTGGACAAAGAGTCAGCCTTTCT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGTTGCTGCAACTGCTGTaGTCACACCTAGAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKLLQLL*SHLEPC
Trigger: GCAAGGCTCTAGGTGTGACAACAGCAGTTGCAGCAA...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGTTGCTGCAACTGCTGTaGTCACACCTAGAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGLLQLL*SHLEPC
Trigger: GCAAGGCTCTAGGTGTGACAACAGCAGTTGCAGCAA...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTTGCTGCAACTGCTGTaGTCACACCTAGAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWLLQLL*SHLEPC
Trigger: GCAAGGCTCTAGGTGTGACAACAGCAGTTGCAGCAA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTCTTGTGGAGGGAGCTaGCTGCAACTGCTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVSCGGS*LQLLLS
Trigger: TGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAGA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGAATGCCTCTTCCTTCTaGTGGAGGGAGCTTGCTGCA +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWNASSF*WRELAA
Trigger: TGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGCATT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGAATGCCTCTTCCTTCTaGTGGAGGGAGCTTGCTGCA +
Preference number: 5 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGNASSF*WRELAA
Trigger: TGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGCATT...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCATTGGCCTTGGAGGCATaGGTTAGTTTTCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPLALEA*VSFLHR
Trigger: CCTGTGCAGAAAACTAACCAATGCCTCCAAGGCCAA...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGTTTGAGGCTTTGGCCTaGGAGGCATTGGTTAGTTTT +
Preference number: 5 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRFEALA*EALVSF
Trigger: AAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAAA...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCATTGGGACAGCTTCTCTaGGTATATGTCTGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPLGQLL*VYVWLC
Trigger: GCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAA...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATCCAGAACAGCCAGCTaGAGAAGCCTGAAGACTGGC +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPSRTAS*RSLKTG
Trigger: GCCAGTCTTCAGGCTTCTCAAGCTGGCTGTTCTGGA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGGCTCCATTTCTGCTGTaGAAGTCTTTGAGAGACCAG +
Preference number: 5 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWAPFLL*KSLRDQ
Trigger: CTGGTCTCTCAAAGACTTCAACAGCAGAAATGGAGC...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp AGGAAGCAGGTGAATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATGCCGGAAGGCTTCCTCACGTTaGATGAATCAAAACTGTGGG +
Preference number: 5 (lower is better)
Translates to: RKQVNGRKNWPQTLYPCRKASSR*MNQNCG
Trigger: CCCACAGTTTTGATTCATCAAACGTGAGGAAGCCTT...CCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466048.6
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATTGGGGAAGGTAGAGTaGGGGACCGAGGAGAAACAC +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPLGKVE*GTEEKH
Trigger: GTGTTTCTCCTCGGTCCCCAACTCTACCTTCCCCAA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGTGTACTTGGCCCCTaGGGAAGTTTCACCCCTGTC +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPCVLGP*GSFTPV
Trigger: GACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGTCCTTCCTGTGTACTaGGCCCCTTGGGAAGTTTCA +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCVLPVY*APWEVS
Trigger: TGAAACTTCCCAAGGGGCCAAGTACACAGGAAGGAC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGGTCCTTCCTGTGTACTaGGCCCCTTGGGAAGTTTCA +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWVLPVY*APWEVS
Trigger: TGAAACTTCCCAAGGGGCCAAGTACACAGGAAGGAC...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGGGAGGCATAACTGCTTaGCCTCCAGTCATCATCTGG +
Preference number: 5 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKGGITA*PPVIIW
Trigger: CCAGATGATGACTGGAGGCAAAGCAGTTATGCCTCC...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS TCA 90 bp ATTCCCTTGAGAGCGCAAAAGATGCAGGAATCTCCCATGCACTTGTaGGTTGTAAGCTGCCTAAAGCTACGTCGGAAGATATCCAAGTGC +
Preference number: 5 (lower is better)
Translates to: IPLRAQKMQESPMHL*VVSCLKLRRKISKC
Trigger: GCACTTGGATATCTTCCGACGTAGCTTTAGGCAGCTTACAACTCACAAGTGCATGGGAGATTCCTGCATCTTTTGCGCTCTCAAGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000413442.5
ENST00000422491.7
ENST00000451492.5
ENST00000461520.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS TCA 90 bp GCCTTTCCTCCTAACCCGACCAGAGCTCCTCTTGCGCTCTATCAGTaGCCCTTTCTTGGATGTGTGTTTCTGATTACATTCACTATCAGT +
Preference number: 5 (lower is better)
Translates to: AFPPNPTRAPLALYQ*PFLGCVFLITFTIS
Trigger: ACTGATAGTGAATGTAATCAGAAACACACATCCAAGAAAGGGTCACTGATAGAGCGCAAGAGGAGCTCTGGTCGGGTTAGGAGGAAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 90 bp CCAGCTGGAAACGTTGTTCATCCTGGAAAGTCTTTGCCAGAGCACTaGGGAGAGTGTCAGATGGAAGCACTTTTTCACTACTACACTGAA +
Preference number: 5 (lower is better)
Translates to: PAGNVVHPGKSLPEH*GECQMEALFHYYTE
Trigger: TTCAGTGTAGTAGTGAAAAAGTGCTTCCATCTGACACTCTCCGCAGTGCTCTGGCAAAGACTTTCCAGGATGAACAACGTTTCCAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339859.8
ENST00000413442.5
ENST00000422491.7
ENST00000451492.5
ENST00000461520.5
ENST00000481991.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 90 bp TTTCGAATACTGATTTGCAACTTCTTATCGACTAGGGCTCTGCTGTaGGTGCTACAGCTGGCACCATGCAGGGCAAGTCTTAGTTTAGAG +
Preference number: 5 (lower is better)
Translates to: FRILICNFLSTRALL*VLQLAPCRASLSLE
Trigger: CTCTAAACTAAGACTTGCCCTGCATGGTGCCAGCTGTAGCACGCACAGCAGAGCCCTAGTCGATAAGAAGTTGCAAATCAGTATTCGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 90 bp GAGGACTCCTCTCTCCCCTTCAGTCGCCAAGACAATGAGAGCTCTTaGTACAGAATACTCATGGTCATTTCTTCCCCTGGCATTCATAAA +
Preference number: 5 (lower is better)
Translates to: EDSSLPFSRQDNESS*YRILMVISSPGIHK
Trigger: TTTATGAATGCCAGGGGAAGAAATGACCATGAGTATTCTGTAGCAAGAGCTCTCATTGTCTTGGCGACTGAAGGGGAGAGAGGAGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498143.5
CDS CCA 90 bp ATTCTCGTTTGGGTCTCCATGTGGGACGATACTTGCTGGAAGAACTaGATTTTGACTCACTGCTGGTACTCTCTATTTCCCAGTCACGAG +
Preference number: 5 (lower is better)
Translates to: ILVWVSMWDDTCWKN*ILTHCWYSLFPSHE
Trigger: CTCGTGACTGGGAAATAGAGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACATGGAGACCCAAACGAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000480210.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ATTTCTGCTGTTGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCTCCCAGCTGGAAACGTaGTTCATCCTGGAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: ISAVEVFERPGSWAECNLSQLET*FILESL
Trigger: AAGACTTTCCAGGATGAACAACGTTTCCAGCTGGGA...GAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR CAA 90 bp GGAAAAGATCACTCCAGGACTGAGTGTGAGGAACCTGAAGGCCCTTGCTTCTTTATGGGAAATGCAGTGTaGGGCAGTACATATATCCTC +
Preference number: 5 (lower is better)
Translates to: GKDHSRTECEEPEGPCFFMGNAV*GSTYIL
Trigger: GAGGATATATGTACTGCCCAACACTGCATTTCCCAT...AAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTGGAGTGATCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422491.7
ENST00000680396.1
CDS-3UTR CAA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGCTCACCAAACATGCTaGGTGAAGGTTTCTCTCGTC +
Preference number: 5 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVAHQTC*VKVSLV
Trigger: GACGAGAGAAACCTTCACCAAGCATGTTTGGTGAGC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAATCCTCTCTCCACAGTaGCTTGGACAGTTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPILSPQ*LGQFRR
Trigger: TCTGCGGAACTGTCCAAGCAACTGTGGAGAGAGGAT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATACAGTTCAGATTGCTaGGCCCGGTCATCCGTCACT +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPYSSDC*ARSSVT
Trigger: AGTGACGGATGACCGGGCCAAGCAATCTGAACTGTA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTACCACATCCTTCCATTaGGGCCCAATCTCCTTGACA +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCTTSFH*GPISLT
Trigger: TGTCAAGGAGATTGGGCCCAAATGGAAGGATGTGGT...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTGCCCCTTGATGCATTaGGTCACCACATCCTTCCAT +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWCPLMH*VTTSFH
Trigger: ATGGAAGGATGTGGTGACCAAATGCATCAAGGGGCA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGAGGGATAGCTCTCCGTaGAGGAATCTGTTCGAGTGT +
Preference number: 5 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGRDSSP*RNLFEC
Trigger: ACACTCGAACAGATTCCTCAACGGAGAGCTATCCCT...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCGACCAGAGCTCCTCTaGCGCTCTATCAGTGACCCT +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGRPELL*RSISDP
Trigger: AGGGTCACTGATAGAGCGCAAGAGGAGCTCTGGTCG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTAAATCTCTCAGCCTGTaGGTGCTGCTGGATGGTTTG +
Preference number: 5 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVKSLSL*VLLDGL
Trigger: CAAACCATCCAGCAGCACCAACAGGCTGAGAGATTT...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp CTCTGGATAGGTTACACACGTATGGGAATCATGAGGGGAGGACTTCATTCCTGGTGGAAGAACTGGATTTaGACTCACTGCTGGTACTCT +
Preference number: 5 (lower is better)
Translates to: LWIGYTRMGIMRGGLHSWWKNWI*THCWYS
Trigger: AGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCCA...CCAGGAATGAAGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGTTCAGAGATTCTCGTTaGGGTCTCCATGTGGGACGA +
Preference number: 5 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKFRDSR*GLHVGR
Trigger: TCGTCCCACATGGAGACCCAAACGAGAATCTCTGAA...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTTCAGAGATTCTCGTTaGGGTCTCCATGTGGGACGA +
Preference number: 5 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVFRDSR*GLHVGR
Trigger: TCGTCCCACATGGAGACCCAAACGAGAATCTCTGAA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTTCAGAGATTCTCGTTaGGGTCTCCATGTGGGACGA +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWFRDSR*GLHVGR
Trigger: TCGTCCCACATGGAGACCCAAACGAGAATCTCTGAA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATACTGCTGTGCGACTTaGGGATATGACGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPYCCAT*GYDARK
Trigger: CTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGTA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGTACTGCTGTGCGACTTaGGGATATGACGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWYCCAT*GYDARK
Trigger: CTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGTA...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGTTGGCCTTGGAGGCATaGGTTAGTTTTCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKLALEA*VSFLHR
Trigger: CCTGTGCAGAAAACTAACCAATGCCTCCAAGGCCAA...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTTGGGACAGCTTCTCTaGGTATATGTCTGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWLGQLL*VYVWLC
Trigger: GCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTTGGGACAGCTTCTCTaGGTATATGTCTGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCLGQLL*VYVWLC
Trigger: GCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGCTCCTGCTCTGTGTCTaGGTTCCAATGTGGATGCAA +
Preference number: 5 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKLLLCV*VPMWMQ
Trigger: TTGCATCCACATTGGAACCAAGACACAGAGCAGGAG...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGATCTGCAGAGCCTGTTaGGCTAAGTGGGTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGICRAC*AKWVPG
Trigger: GCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGAT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCTGCTGTTGAAGTCTTaGAGAGACCAGGATCATGGG +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWLLLKS*RDQDHG
Trigger: CCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp CCTAGGTGCCCCATGCTTAAGCTGAGAATCACAGAACCTTGTGATATTCACCCAGCTCCATTTCTGCTGTaGAAGTCTTTGAGAGACCAG +
Preference number: 5 (lower is better)
Translates to: PRCPMLKLRITEPCDIHPAPFLL*KSLRDQ
Trigger: CTGGTCTCTCAAAGACTTCAACAGCAGAAATGGAGC...TGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGACTGCTGGACACTCCTaGAAGTTCCTGGGAGTCTAT +
Preference number: 5 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKTAGHS*KFLGVY
Trigger: ATAGACTCCCAGGAACTTCAAGGAGTGTCCAGCAGT...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGGTCCCAATATGCTGGTaGGTCTCTGACCAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGVPICW*VSDQGA
Trigger: GGCACCCTGGTCAGAGACCAACCAGCATATTGGGAC...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGAGGGTGAATGTTATGTaGGCAGCTCCGCATTCTAGG +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWRVNVM*AAPHSR
Trigger: CCTAGAATGCGGAGCTGCCAACATAACATTCACCCT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGCAAGAAGAAGCCTGTTaGAATCATCTGAGGTTTTTG +
Preference number: 5 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKQEEAC*NHLRFL
Trigger: CAAAAACCTCAGATGATTCAAACAGGCTTCTTCTTG...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGACTGCTGGACACTCCTaGAAGTTCCTGAGAAGTACG +
Preference number: 5 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKTAGHS*KFLRST
Trigger: CGTACTTCTCAGGAACTTCAAGGAGTGTCCAGCAGT...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGACTGCTGGACACTCCTaGAAGTTCTGTTCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWTAGHS*KFCSGF
Trigger: GAAGCCAGAACAGAACTTCAAGGAGTGTCCAGCAGT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS CCA 90 bp TCTGCCCCTGCAGTGAGAGCCTACATTGGTCTGAGAAGCCAGGGATaGTCTGTTATGGATCATATTGCTGACTGTCTCTTTAAAATCTCT +
Preference number: 5 (lower is better)
Translates to: SAPAVRAYIGLRSQG*SVMDHIADCLFKIS
Trigger: AGAGATTTTAAAGAGACAGTCAGCAATATGATCCATAACAGACCATCCCTGGCTTCTCAGACCAATGTAGGCTCTCACTGCAGGGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCATCCTGGAAAGTCTTaGCCAGAGCACTGCGGAGAG +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGHPGKS*PEHCGE
Trigger: CTCTCCGCAGTGCTCTGGCAAAGACTTTCCAGGATG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTCCCAGCTGGAAACGTaGTTCATCCTGGAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCSQLET*FILESL
Trigger: AAGACTTTCCAGGATGAACAACGTTTCCAGCTGGGA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACCGCGCCCGGCCCACAGTACAGTTTTACAAAGAAAGGTGTAGCTCCAGGAAAGGCTCAAACAATGTCATaGCAAATTTCTGATGGGAAA +
Preference number: 5 (lower is better)
Translates to: TAPGPQYSFTKKGVAPGKAQTMS*QISDGK
Trigger: TTTCCCATCAGAAATTTGCAATGACATTGTTTGAGC...CTTTCCTGGAGCTACACCTTTCTTTGTAAAACTGTACTGTGGGCCGGGCGCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGCTCACCAAACATGCTaGGTGAAGGTTTCTCTCGTC +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPAHQTC*VKVSLV
Trigger: GACGAGAGAAACCTTCACCAAGCATGTTTGGTGAGC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAACCACATCCTTCCATTaGGGCCCAATCTCCTTGACA +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPTTSFH*GPISLT
Trigger: TGTCAAGGAGATTGGGCCCAAATGGAAGGATGTGGT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGGTGCTGCTGGATGGTTaGGAGGCATTTCTAGGAGCC +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGVLLDG*EAFLGA
Trigger: GGCTCCTAGAAATGCCTCCAAACCATCCAGCAGCAC...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGAAATCTCTCAGCCTGTaGGTGCTGCTGGATGGTTTG +
Preference number: 5 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWKSLSL*VLLDGL
Trigger: CAAACCATCCAGCAGCACCAACAGGCTGAGAGATTT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGTCTCCTGCTCTGTGTCTTGGTTCCAATGTGGATGCAAAAGGATGTGATTTCTGCAGAGGGTTCAATGTaGTCTACTTCAACCGAAGTC +
Preference number: 5 (lower is better)
Translates to: GLLLCVLVPMWMQKDVISAEGSM*STSTEV
Trigger: GACTTCGGTTGAAGTAGACAACATTGAACCCTCTGC...AGAAATCACATCCTTTTGCATCCACATTGGAACCAAGACACAGAGCAGGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGCAGAGGGTTCAATGTaGTCTACTTCAACCGAAGTC +
Preference number: 5 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVAEGSM*STSTEV
Trigger: GACTTCGGTTGAAGTAGACAACATTGAACCCTCTGC...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGTCACACCTAGAGCCTaGCAGCTTACCCTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPVTPRA*QLTLWG
Trigger: GCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGAC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGTTGGCCTTGGAGGCATaGGTTAGTTTTCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWLALEA*VSFLHR
Trigger: CCTGTGCAGAAAACTAACCAATGCCTCCAAGGCCAA...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGGAGAGGATTGTTGCTTaGCCCATGGCCAGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGERIVA*PMASGL
Trigger: AAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTC...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATTGGGACAGCTTCTCTaGGTATATGTCTGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPLGQLL*VYVWLC
Trigger: GCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCCTAACATCTCTCACTaGGGACAGCTTCTCTTGGTA +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCPNISH*GQLLLV
Trigger: TACCAAGAGAAGCTGTCCCAAGTGAGAGATGTTAGG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTCCAGAACAGCCAGCTaGAGAAGCCTGAAGACTGGC +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGSRTAS*RSLKTG
Trigger: GCCAGTCTTCAGGCTTCTCAAGCTGGCTGTTCTGGA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGCTGCTGTTGAAGTCTTaGAGAGACCAGGATCATGGG +
Preference number: 5 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWLLLKS*RDQDHG
Trigger: CCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAG...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCACTGCTGTTGAAGTCTTaGAGAGACCAGGATCATGGG +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPLLLKS*RDQDHG
Trigger: CCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAG...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTGCTCCATTTCTGCTGTaGAAGTCTTTGAGAGACCAG +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCAPFLL*KSLRDQ
Trigger: CTGGTCTCTCAAAGACTTCAACAGCAGAAATGGAGC...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGTTCCTGGGAGTCTATaGGGCTCCCCTGCCATGGTG +
Preference number: 5 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPVPGSL*GSPAMV
Trigger: CACCATGGCAGGGGAGCCCAATAGACTCCCAGGAAC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAACTGCTGGACACTCCTaGAAGTTCCTGGGAGTCTAT +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPTAGHS*KFLGVY
Trigger: ATAGACTCCCAGGAACTTCAAGGAGTGTCCAGCAGT...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CAA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTCAGGGTGCCCAGGAGTaGTCTGTTCTGGAGCGATGG +
Preference number: 5 (lower is better)
Translates to: WKLEFQISPPKESHLFRGQGAQE*SVLERW
Trigger: CCATCGCTCCAGAACAGACAACTCCTGGGCACCCTG...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTGCCCCAAACTTCTATaGTCCCATCCAGATCTTCAG +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCCPKLL*SHPDLQ
Trigger: CTGAAGATCTGGATGGGACAATAGAAGTTTGGGGCA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS TCA 90 bp CTCCTCTTGCGCTCTATCAGTGACCCTTTCTTGGATGTGTGTTTCTaGTTACATTCACTATCAGTCAGGTGTCCTGAATCTTCACTGTCG +
Preference number: 5 (lower is better)
Translates to: LLLRSISDPFLDVCF*LHSLSVRCPESSLS
Trigger: CGACAGTGAAGATTCAGGACACCTGACTGATAGTGAATGTAATCAGAAACACACATCCAAGAAAGGGTCACTGATAGAGCGCAAGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497106.5
CDS CCA 90 bp TATTCAGAGATTCTCGTTTGGGTCTCCATGTGGGACGATACTTGCTaGAAGAACTGGATTTTGACTCACTGCTGGTACTCTCTATTTCCC +
Preference number: 5 (lower is better)
Translates to: YSEILVWVSMWDDTC*KNWILTHCWYSLFP
Trigger: GGGAAATAGAGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACATGGAGACCCAAACGAGAATCTCTGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000480210.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTTTTGCCCTGGCTCATaGCTGAGGCCTTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPFCPGS*LRPLLG
Trigger: CCCCAGCAAAGGCCTCAGCAATGAGCCAGGGCAAAA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTGGTTAAAGATTCCCTaGAGAGCGCAAAAGATGCAG +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWWLKIP*RAQKMQ
Trigger: CTGCATCTTTTGCGCTCTCAAGGGAATCTTTAACCA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGATGGGAAATGCAGTGTaGGGCAGTACATATATCCTC +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWMGNAV*GSTYIL
Trigger: GAGGATATATGTACTGCCCAACACTGCATTTCCCAT...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGATCCTCTCTCCACAGTaGCTTGGACAGTTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGILSPQ*LGQFRR
Trigger: TCTGCGGAACTGTCCAAGCAACTGTGGAGAGAGGAT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTACAGTTCAGATTGCTaGGCCCGGTCATCCGTCACT +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGYSSDC*ARSSVT
Trigger: AGTGACGGATGACCGGGCCAAGCAATCTGAACTGTA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTACTGTTCGAGTGTCACTaGAGATGGAGGGCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVLFECH*RWRAPS
Trigger: GGAGGGAGCCCTCCATCTCAAGTGACACTCGAACAG...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTTGGAAGAACTGGATTTaGACTCACTGCTGGTACTCT +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCWKNWI*THCWYS
Trigger: AGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCCA...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TCAATGTTGTCTACTTCAACCGAAGTCAGAAGCTTCAAGGCAGATCTACTGGGGCATGTGGGACGATACTaGCTGGAAGAACTGGATTTT +
Preference number: 5 (lower is better)
Translates to: SMLSTSTEVRSFKADLLGHVGRY*LEELDF
Trigger: AAAATCCAGTTCTTCCAGCAAGTATCGTCCCACATG...CCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
CDS-3UTR CAA 90 bp AACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTGTCATGTGGGACGATACTaGCTGGAAGAACTGGATTTT +
Preference number: 5 (lower is better)
Translates to: NHGSDAGYQRCHSSLFCCHVGRY*LEELDF
Trigger: AAAATCCAGTTCTTCCAGCAAGTATCGTCCCACATG...ACAACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTACTGCTGTGCGACTTaGGGATATGACGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGYCCAT*GYDARK
Trigger: CTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGTA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGTTTGAGGCTTTGGCCTaGGAGGCATTGGTTAGTTTT +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWFEALA*EALVSF
Trigger: AAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAAA...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTTTTGAGGCTTTGGCCTaGGAGGCATTGGTTAGTTTT +
Preference number: 5 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVFEALA*EALVSF
Trigger: AAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAAA...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTAACGGACAAGCCCCTTaGTGCTGGGAAACTCTGGCC +
Preference number: 5 (lower is better)
Translates to: WKLEFQISPPKESHLFRGNGQAP*CWETLA
Trigger: GGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGCCTAACATCTCTCACTaGGGACAGCTTCTCTTGGTA +
Preference number: 5 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWPNISH*GQLLLV
Trigger: TACCAAGAGAAGCTGTCCCAAGTGAGAGATGTTAGG...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGTCCCAATATGCTGGTaGGTCTCTGACCAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPVPICW*VSDQGA
Trigger: GGCACCCTGGTCAGAGACCAACCAGCATATTGGGAC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGGGAGGCATAACTGCTTaGCCTCCAGTCATCATCTGG +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGGGITA*PPVIIW
Trigger: CCAGATGATGACTGGAGGCAAAGCAGTTATGCCTCC...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCCTCCTCACCCTCTATaGCCTTGTCTCATCATCCTC +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGPPHPL*PCLIIL
Trigger: GAGGATGATGAGACAAGGCAATAGAGGGTGAGGAGG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS CCA 90 bp TTCATCCTGGAAAGTCTTTGCCAGAGCACTGCGGAGAGTGTCAGATaGAAGCACTTTTTCACTACTACACTGAAACTGGTTAAAGATTCC +
Preference number: 5 (lower is better)
Translates to: FILESLCQSTAESVR*KHFFTTTLKLVKDS
Trigger: GGAATCTTTAACCAGTTTCAGTGTAGTAGTGAAAAAGTGCTTCCATCTGACACTCTCCGCAGTGCTCTGGCAAAGACTTTCCAGGATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339859.8
ENST00000413442.5
ENST00000422491.7
ENST00000451492.5
ENST00000461520.5
ENST00000481991.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTCATCCTGGAAAGTCTTaGCCAGAGCACTGCGGAGAG +
Preference number: 5 (lower is better)
Translates to: WKLEFQISPPKESHLFRGHPGKS*PEHCGE
Trigger: CTCTCCGCAGTGCTCTGGCAAAGACTTTCCAGGATG...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTCTCTCCACAGTTGCTaGGACAGTTCCGCAGATCCC +
Preference number: 5 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPSLHSC*DSSADP
Trigger: GGGATCTGCGGAACTGTCCAAGCAACTGTGGAGAGA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGAAATCTCTCAGCCTGTaGGTGCTGCTGGATGGTTTG +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGKSLSL*VLLDGL
Trigger: CAAACCATCCAGCAGCACCAACAGGCTGAGAGATTT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCACATGTGGGACGATACTaGCTGGAAGAACTGGATTTT +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPHVGRY*LEELDF
Trigger: AAAATCCAGTTCTTCCAGCAAGTATCGTCCCACATG...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACAACCATGGCAGTGATGCAGGGTACCAACGCTGCCACAGTAGTTTATTTTGTTCCACAGTGCTTCCTTTaGTCCTTACTAAAGATACTG +
Preference number: 5 (lower is better)
Translates to: TTMAVMQGTNAATVVYFVPQCFL*SLLKIL
Trigger: CAGTATCTTTAGTAAGGACAAAAGGAAGCACTGTGG...AACAAAATAAACTACTGTGGCAGCGTTGGTACCCTGCATCACTGCCATGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCCACAGTGCTTCCTTTaGTCCTTACTAAAGATACTG +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWPQCFL*SLLKIL
Trigger: CAGTATCTTTAGTAAGGACAAAAGGAAGCACTGTGG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGATCCCTGTAGACATTaGAGCTCTCAGGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: WKLEFQISPPKESHLFRGDPCRH*SSQAGL
Trigger: CAGCCCTGCCTGAGAGCTCAAATGTCTACAGGGATC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGGCTGAGCTGATGAATTaGAAGGACTACAGCCTAGGC +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGAELMN*KDYSLG
Trigger: GCCTAGGCTGTAGTCCTTCAAATTCATCAGCTCAGC...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGTTTGAGGCTTTGGCCTaGGAGGCATTGGTTAGTTTT +
Preference number: 5 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWFEALA*EALVSF
Trigger: AAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAAA...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATTTGAGGCTTTGGCCTaGGAGGCATTGGTTAGTTTT +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPFEALA*EALVSF
Trigger: AAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAAA...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGAGAGGATTGTTGCTTaGCCCATGGCCAGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: WKLEFQISPPKESHLFRGERIVA*PMASGL
Trigger: AAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTACCCTCCAGAGAGGATaGTTGCTTTGCCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPTLQRG*LLCPWP
Trigger: TGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGT...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAACCCTCCAGAGAGGATaGTTGCTTTGCCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVTLQRG*LLCPWP
Trigger: TGGCCATGGGCAAAGCAACAATCCTCTCTGGAGGGT...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCTCCTGCTCTGTGTCTaGGTTCCAATGTGGATGCAA +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGLLLCV*VPMWMQ
Trigger: TTGCATCCACATTGGAACCAAGACACAGAGCAGGAG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTATTGGGGAAGGTAGAGTaGGGGACCGAGGAGAAACAC +
Preference number: 5 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVLGKVE*GTEEKH
Trigger: GTGTTTCTCCTCGGTCCCCAACTCTACCTTCCCCAA...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000424265.5
ENST00000466048.6
ENST00000681793.1
CDS-3UTR CAA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTGTGTACTTGGCCCCTaGGGAAGTTTCACCCCTGTC +
Preference number: 5 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPCVLGP*GSFTPV
Trigger: GACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGAGGATTTGTGCCTTTTaGGCAGGAATTTCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWRICAF*AGISVC
Trigger: GCAGACAGAAATTCCTGCCAAAAAGGCACAAATCCT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS GCA 90 bp CAATATTCAGAGATTCTCGTTTGGGTCTCCATGTGGGACGATACTTaGTGGAAGAACTGGATTTTGACTCACTGCTGGTACTCTCTATTT +
Preference number: 5 (lower is better)
Translates to: QYSEILVWVSMWDDT*WKNWILTHCWYSLF
Trigger: AAATAGAGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACATGGAGACCCAAACGAGAATCTCTGAATATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000480210.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTATCCTCTCTCCACAGTaGCTTGGACAGTTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: WKLEFQISPPKESHLFRGILSPQ*LGQFRR
Trigger: TCTGCGGAACTGTCCAAGCAACTGTGGAGAGAGGAT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGTCCTAGGAGGTTTTTaGTCAGGCTGGTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVVLGGF*SGWSPP
Trigger: AGGAGGAGACCAGCCTGACAAAAAACCTCCTAGGAC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGGCAGAGGGTTCAATGTaGTCTACTTCAACCGAAGTC +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGAEGSM*STSTEV
Trigger: GACTTCGGTTGAAGTAGACAACATTGAACCCTCTGC...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTAATGCCTCTTCCTTCTaGTGGAGGGAGCTTGCTGCA +
Preference number: 5 (lower is better)
Translates to: WKLEFQISPPKESHLFRGNASSF*WRELAA
Trigger: TGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGCATT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGTCCTTCCTGTGTACTaGGCCCCTTGGGAAGTTTCA +
Preference number: 5 (lower is better)
Translates to: WKLEFQISPPKESHLFRGVLPVY*APWEVS
Trigger: TGAAACTTCCCAAGGGGCCAAGTACACAGGAAGGAC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TTCAAAAGGGTGAATGTTATGTTGGCAGCTCCGCATTCTAGGCCTAAGGTTTGGCATCTGAGGTTTTTGTaGATGTTCTTGCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: FKRVNVMLAAPHSRPKVWHLRFL*MFLLLL
Trigger: AAGAAGCAGCAAGAACATCAACAAAAACCTCAGATG...CCAAACCTTAGGCCTAGAATGCGGAGCTGCCAACATAACATTCACCCTTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGAGAGCCCTCCCTCACTaGTTCCAAACAATCTCCAAA +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGRALPH*FQTISK
Trigger: TTTGGAGATTGTTTGGAACAAGTGAGGGAGGGCTCT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS TCA 90 bp TTACTGCTAAATCAAACATTAATGTACATTCCTAACTCACACATTTaGCTTTCTTCCTCTGCCCCCTATACCAAAGCCCCTGACCAGGCT +
Preference number: 5 (lower is better)
Translates to: LLLNQTLMYIPNSHI*LSSSAPYTKAPDQA
Trigger: AGCCTGGTCAGGGGCTTTGGTATAGGGGGCAGAGGAAGAAAGTCAAATGTGTGAGTTAGGAATGTACATTAATGTTTGATTTAGCAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492357.1
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGTGGTTAAAGATTCCCTaGAGAGCGCAAAAGATGCAG +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGWLKIP*RAQKMQ
Trigger: CTGCATCTTTTGCGCTCTCAAGGGAATCTTTAACCA...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACTCTGGCCTATAGGTCTCCTCACTGCCTCTGTCCACTTTTAAAGTCAATGAAGGCTCAAACAATGTCATaGCAAATTTCTGATGGGAAA +
Preference number: 5 (lower is better)
Translates to: TLAYRSPHCLCPLLKSMKAQTMS*QISDGK
Trigger: TTTCCCATCAGAAATTTGCAATGACATTGTTTGAGC...CTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR CAA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTAGGGATAGCTCTCCGTaGAGGAATCTGTTCGAGTGT +
Preference number: 5 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPRDSSP*RNLFEC
Trigger: ACACTCGAACAGATTCCTCAACGGAGAGCTATCCCT...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTAGGGATAGCTCTCCGTaGAGGAATCTGTTCGAGTGT +
Preference number: 5 (lower is better)
Translates to: WKLEFQISPPKESHLFRGRDSSP*RNLFEC
Trigger: ACACTCGAACAGATTCCTCAACGGAGAGCTATCCCT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTTCAGAGATTCTCGTTaGGGTCTCCATGTGGGACGA +
Preference number: 5 (lower is better)
Translates to: WKLEFQISPPKESHLFRGFRDSR*GLHVGR
Trigger: TCGTCCCACATGGAGACCCAAACGAGAATCTCTGAA...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTGCTGAGCTGATGAATTaGAAGGACTACAGCCTAGGC +
Preference number: 5 (lower is better)
Translates to: WKLEFQISPPKESHLFRGAELMN*KDYSLG
Trigger: GCCTAGGCTGTAGTCCTTCAAATTCATCAGCTCAGC...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTTGGGACAGCTTCTCTaGGTATATGTCTGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPLGQLL*VYVWLC
Trigger: GCAGAGCCAGACATATACCAAGAGAAGCTGTCCCAA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTCTCCTGCTCTGTGTCTaGGTTCCAATGTGGATGCAA +
Preference number: 5 (lower is better)
Translates to: WKLEFQISPPKESHLFRGLLLCV*VPMWMQ
Trigger: TTGCATCCACATTGGAACCAAGACACAGAGCAGGAG...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTAGGGTGAATGTTATGTaGGCAGCTCCGCATTCTAGG +
Preference number: 5 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPRVNVM*AAPHSR
Trigger: CCTAGAATGCGGAGCTGCCAACATAACATTCACCCT...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGTGTTCTTCAGGCTTGTaGATAATGCTTCTTATGGAC +
Preference number: 5 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWCSSGL*IMLLMD
Trigger: GTCCATAAGAAGCATTATCAACAAGCCTGAAGAACA...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS TCA 90 bp TTCCCTCTTAATTACAGGCAGCCTTCCTCATACACACTGAGAATCTaGATGCATTCAGAATGGCCTCTGACTACATCTTCTTTATTCTCT +
Preference number: 5 (lower is better)
Translates to: FPLNYRQPSSYTLRI*MHSEWPLTTSSLFS
Trigger: AGAGAATAAAGAAGATGTAGTCAGAGGCCATTCTGAATGCATTCAGATTCTCAGTGTGTATGAGGAAGGCTGCCTGTAATTAAGAGGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497106.5
CDS-3UTR CAA 90 bp GACACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCAGCTCAAACAATGTCATaGCAAATTTCTGATGGGAAA +
Preference number: 5 (lower is better)
Translates to: DTLRRTHQFYVEMRIAQPAQTMS*QISDGK
Trigger: TTTCCCATCAGAAATTTGCAATGACATTGTTTGAGC...TGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTGCAGAGGGTTCAATGTaGTCTACTTCAACCGAAGTC +
Preference number: 5 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPAEGSM*STSTEV
Trigger: GACTTCGGTTGAAGTAGACAACATTGAACCCTCTGC...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGCTCCATTTCTGCTGTaGAAGTCTTTGAGAGACCAG +
Preference number: 5 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVAPFLL*KSLRDQ
Trigger: CTGGTCTCTCAAAGACTTCAACAGCAGAAATGGAGC...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTGCCCCAAACTTCTATaGTCCCATCCAGATCTTCAG +
Preference number: 5 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPCPKLL*SHPDLQ
Trigger: CTGAAGATCTGGATGGGACAATAGAAGTTTGGGGCA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTCACCCTCTATTGCCTaGTCTCATCATCCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPSPSIA*SHHPLK
Trigger: CTTCAGAGGATGATGAGACAAGGCAATAGAGGGTGA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp ACCCTTAGGAGAACCCACCAATTCTATGTTGAGATGAGAATAGCACAACCATGGATGTGTTCTTCAGGCTaGTTGATAATGCTTCTTATG +
Preference number: 5 (lower is better)
Translates to: TLRRTHQFYVEMRIAQPWMCSSG*LIMLLM
Trigger: CATAAGAAGCATTATCAACAAGCCTGAAGAACACAT...CCATGGTTGTGCTATTCTCATCTCAACATAGAATTGGTGGGTTCTCCTAAGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAAGAGCCCTCCCTCACTaGTTCCAAACAATCTCCAAA +
Preference number: 5 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVRALPH*FQTISK
Trigger: TTTGGAGATTGTTTGGAACAAGTGAGGGAGGGCTCT...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS TCA 90 bp CAGCTAGTACATACACACTGCTCAAACAATGTCATTGCAAATTTCTaGTGGGAAATGCAGTGTTGGGCAGTACATATATCCTCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: QLVHTHCSNNVIANF*WEMQCWAVHISSLV
Trigger: AACCAAAGAGGATATATGTACTGCCCAACACTGCATTTCCCATCAGAAATTTGCAATGACATTGTTTGAGCAGTGTGTATGTACTAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000461520.5
ENST00000481991.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 90 bp ATTTCTGATGGGAAATGCAGTGTTGGGCAGTACATATATCCTCTTTaGTTTCATCAGCAATGTGGAAGTGAATTCTCATCAGGAGGTTTT +
Preference number: 5 (lower is better)
Translates to: ISDGKCSVGQYIYPL*FHQQCGSEFSSGGF
Trigger: AAAACCTCCTGATGAGAATTCACTTCCACATTGCTGATGAAACCAAAGAGGATATATGTACTGCCCAACACTGCATTTCCCATCAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000461520.5
ENST00000481991.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTATGGGAAATGCAGTGTaGGGCAGTACATATATCCTC +
Preference number: 5 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPMGNAV*GSTYIL
Trigger: GAGGATATATGTACTGCCCAACACTGCATTTCCCAT...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTGGAAGAACTGGATTTaGACTCACTGCTGGTACTCT +
Preference number: 5 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPWKNWI*THCWYS
Trigger: AGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCCA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTACATGTGGGACGATACTaGCTGGAAGAACTGGATTTT +
Preference number: 5 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVHVGRY*LEELDF
Trigger: AAAATCCAGTTCTTCCAGCAAGTATCGTCCCACATG...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTAAGGCTTCCTCACGTTaGATGAATCAAAACTGTGGG +
Preference number: 5 (lower is better)
Translates to: WKLEFQISPPKESHLFRGKASSR*MNQNCG
Trigger: CCCACAGTTTTGATTCATCAAACGTGAGGAAGCCTT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339859.8
ENST00000466048.6
CDS-3UTR CAA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTAAGGCTTCCTCACGTTaGATGAATCCTGAGAAGTAC +
Preference number: 5 (lower is better)
Translates to: WKLEFQISPPKESHLFRGKASSR*MNPEKY
Trigger: GTACTTCTCAGGATTCATCAAACGTGAGGAAGCCTT...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418501.5
ENST00000424265.5
ENST00000681793.1
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGCAAGAAGAAGCCTGTTaGAATCATCTGAGGTTTTTG +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGQEEAC*NHLRFL
Trigger: CAAAAACCTCAGATGATTCAAACAGGCTTCTTCTTG...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS GCA 90 bp ATACACACTGCTCAAACAATGTCATTGCAAATTTCTGATGGGAAATaGAGTGTTGGGCAGTACATATATCCTCTTTGGTTTCATCAGCAA +
Preference number: 5 (lower is better)
Translates to: IHTAQTMSLQISDGK*SVGQYIYPLWFHQQ
Trigger: TTGCTGATGAAACCAAAGAGGATATATGTACTGCCCAACACTGCATTTCCCATCAGAAATTTGCAATGACATTGTTTGAGCAGTGTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000461520.5
ENST00000481991.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 90 bp ACCCATGGGAAATGTGGACAAATGGTCTTATTATGCTGTACTTTTTaGATCCTAGGAATTATTAAGATAAGGACCAGCAGTACAATGAGC +
Preference number: 5 (lower is better)
Translates to: THGKCGQMVLLCCTF*ILGIIKIRTSSTMS
Trigger: GCTCATTGTACTGCTGGTCCTTATCTTAATAATTCCTAGGATGCAAAAAGTACAGCATAATAAGACCATTTGTCCACATTTCCCATGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498143.5
CDS-3UTR CAA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTCCACAGTGCTTCCTTTaGTCCTTACTAAAGATACTG +
Preference number: 5 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPPQCFL*SLLKIL
Trigger: CAGTATCTTTAGTAAGGACAAAAGGAAGCACTGTGG...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp GGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTAGGGATGTGTTCTTCAGGCTaGTTGATAATGCTTCTTATG +
Preference number: 5 (lower is better)
Translates to: GNRDRWIKQRVEVGSIVGMCSSG*LIMLLM
Trigger: CATAAGAAGCATTATCAACAAGCCTGAAGAACACAT...CCCTACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS-3UTR CAA 90 bp TCAGGTAATAGGGATAGGTGGATAAAACAAAGAGTAGAAGTTGGGAGTATAGTATCTTCCAAGACATTATaGTTCACATTTAGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: SGNRDRWIKQRVEVGSIVSSKTL*FTFSPP
Trigger: AGGAGGGCTAAATGTGAACAATAATGTCTTGGAAGA...TACTATACTCCCAACTTCTACTCTTTGTTTTATCCACCTATCCCTATTACCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339859.8
CDS-3UTR CAA 90 bp AGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTCCTTCTTCCAAGACATTATaGTTCACATTTAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SWNFKYPLPKNHIFLEVPSSKTL*FTFSSS
Trigger: GGAGCTGCTAAATGTGAACAATAATGTCTTGGAAGA...AGGAACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS-3UTR CAA 90 bp TGGAAGTTGGAATTTCAAATATCCCCTCCCAAAGAATCACATCTTTTTAGAGGTTGTTCTTCAGGCTTGTaGATAATGCTTCTTATGGAC +
Preference number: 5 (lower is better)
Translates to: WKLEFQISPPKESHLFRGCSSGL*IMLLMD
Trigger: GTCCATAAGAAGCATTATCAACAAGCCTGAAGAACA...ACCTCTAAAAAGATGTGATTCTTTGGGAGGGGATATTTGAAATTCCAACTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680396.1
ENST00000681793.1
CDS GCA 72 bp GCCTGTGTTGGGAGGCAGGCTGAGGGCTGCGACGGCTaGTGTGGTGATTGCTGCTGCTGCATGCGATCCTGC +
Preference number: 6 (lower is better)
Translates to: ACVGRQAEGCDG*CGDCCCCMRSC
Trigger: GCAGGATCGCATGCAGCAGCAGCAATCACCACAGCAGCCGTCGCAGCCCTCAGCCTGCCTCCCAACACAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS TCA 72 bp GGAGTGTGGCAGTGCCATCACGGCTCACTGCAGCCTTaGCCTGCCGGGCTAACCGATTCTTCCACCCAAGCC +
Preference number: 6 (lower is better)
Translates to: GVWQCHHGSLQP*PAGLTDSSTQA
Trigger: GGCTTGGGTGGAAGAATCGGTTAGCCCGGCAGGTCAAGGCTGCAGTGAGCCGTGATGGCACTGCCACACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498143.5
CDS CAA 90 bp TTCCCAAGCACTACCTTGTTGGCTGAGAGAGAGTCCCCGCCTGTGTaGGGAGGCAGGCTGAGGGCTGCGACGGCTGCTGTGGTGATTGCT +
Preference number: 6 (lower is better)
Translates to: FPSTTLLAERESPPV*GGRLRAATAAVVIA
Trigger: AGCAATCACCACAGCAGCCGTCGCAGCCCTCAGCCTGCCTCCCAACACAGGCGGGGACTCTCTCTCAGCCAACAAGGTAGTGCTTGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498143.5
CDS GCA 72 bp GTGGCAGTGCCATCACGGCTCACTGCAGCCTTGACCTaGCGGGCTAACCGATTCTTCCACCCAAGCCTCCTA +
Preference number: 6 (lower is better)
Translates to: VAVPSRLTAALT*RANRFFHPSLL
Trigger: TAGGAGGCTTGGGTGGAAGAATCGGTTAGCCCGGCAGGTCAAGGCTGCAGTGAGCCGTGATGGCACTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498143.5
CDS CAA 72 bp TGGAGTGTGGCAGTGCCATCACGGCTCACTGCAGCCTaGACCTGCCGGGCTAACCGATTCTTCCACCCAAGC +
Preference number: 6 (lower is better)
Translates to: WSVAVPSRLTAA*TCRANRFFHPS
Trigger: GCTTGGGTGGAAGAATCGGTTAGCCCGGCAGGTCAAGGCTGCAGTGAGCCGTGATGGCACTGCCACACTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498143.5
CDS GCA 72 bp GAGGGCTGCGACGGCTGCTGTGGTGATTGCTGCTGCTaGATGCGATCCTGCAGGCTCCGTGCTTTTCGAATA +
Preference number: 6 (lower is better)
Translates to: EGCDGCCGDCCC*MRSCRLRAFRI
Trigger: TATTCGAAAAGCACGGAGCCTGCAGGATCGCATGCAGCAGCAGCAATCACCACAGCAGCCGTCGCAGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 72 bp AGCCACCCATGGATGCTGTGGAGTCTACCTCCAGGATaGTACTGCTGTGCGACTTTGGGATATGACGCCAGG +
Preference number: 6 (lower is better)
Translates to: SHPWMLWSLPPG*YCCATLGYDAR
Trigger: CCTGGCGTCATATCCCAAAGTCGCACAGCAGTAGCATCCTGGAGGTAGACTCCACAGCATCCATGGGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 72 bp CTCCACAGTTGCTTGGACAGTTCCGCAGATCCCCCATaGTGCTGGCATTCTGCAGCAGCTCACCAAACATGC +
Preference number: 6 (lower is better)
Translates to: LHSCLDSSADPP*CWHSAAAHQTC
Trigger: GCATGTTTGGTGAGCTGCTGCAGAATGCCAGCACCATGGGGGATCTGCGGAACTGTCCAAGCAACTGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000461520.5
ENST00000492357.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 72 bp TTCAGTGTTTCTCCTTCACTGTGGTATCCCGAGGCCTaGGGCTCATCGCCTTTCCTCCTAACCCGACCAGAG +
Preference number: 6 (lower is better)
Translates to: FSVSPSLWYPEA*GSSPFLLTRPE
Trigger: CTCTGGTCGGGTTAGGAGGAAAGGCGATGAGCCCCAGGCCTCGGGATACCACAGTGAAGGAGAAACACTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CAA 90 bp TCCCCTGGCATTCATAAACTAACATGGTTCCCAAGCACTACCTTGTaGGCTGAGAGAGAGTCCCCGCCTGTGTTGGGAGGCAGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: SPGIHKLTWFPSTTL*AERESPPVLGGRLR
Trigger: CCTCAGCCTGCCTCCCAACACAGGCGGGGACTCTCTCTCAGCCAACAAGGTAGTGCTTGGGAACCATGTTAGTTTATGAATGCCAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498143.5
CDS TCA 72 bp AGCAAAGGCCATCCCTCCACTTGTCTCAGCCATGCCTaGAAGCCCCAAGTAGGTGGCTCACATTGCTGCAAG +
Preference number: 6 (lower is better)
Translates to: SKGHPSTCLSHA*KPQVGGSHCCK
Trigger: CTTGCAGCAATGTGAGCCACCTACTTGGGGCTTTCAGGCATGGCTGAGACAAGTGGAGGGATGGCCTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480210.1
CDS GCA 72 bp GGACAGTTCCGCAGATCCCCCATGGTGCTGGCATTCTaGAGCAGCTCACCAAACATGCTTGGTGAAGGTTTC +
Preference number: 6 (lower is better)
Translates to: GQFRRSPMVLAF*SSSPNMLGEGF
Trigger: GAAACCTTCACCAAGCATGTTTGGTGAGCTGCTGCAGAATGCCAGCACCATGGGGGATCTGCGGAACTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000461520.5
ENST00000492357.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 72 bp GCTCCCTCCCTGAATCTTCACTGTCGTAGCATGTCCTaGTGTATGACTGGAACTCAGCTTGGGGAGGCAGGT +
Preference number: 6 (lower is better)
Translates to: APSLNLHCRSMS*CMTGTQLGEAG
Trigger: ACCTGCCTCCCCAAGCTGAGTTCCAGTCATACAGCAGGACATGCTACGACAGTGAAGATTCAGGGAGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 72 bp AGTTGCTTGGACAGTTCCGCAGATCCCCCATGGTGCTaGCATTCTGCAGCAGCTCACCAAACATGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: SCLDSSADPPWC*HSAAAHQTCLV
Trigger: CACCAAGCATGTTTGGTGAGCTGCTGCAGAATGCCAGCACCATGGGGGATCTGCGGAACTGTCCAAGCAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000461520.5
ENST00000492357.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 72 bp GGTCTCCTCCTCTGCCCCTGCAGTGAGAGCCTACATTaGTCTGAGAAGCCAGGGATGGTCTGTTATGGATCA +
Preference number: 6 (lower is better)
Translates to: GLLLCPCSESLH*SEKPGMVCYGS
Trigger: TGATCCATAACAGACCATCCCTGGCTTCTCAGACCAATGTAGGCTCTCACTGCAGGGGCAGAGGAGGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 72 bp AAGGCTGACTCTTTGTCCAGCCACCCATGGATGCTGTaGAGTCTACCTCCAGGATGCTACTGCTGTGCGACT +
Preference number: 6 (lower is better)
Translates to: KADSLSSHPWML*SLPPGCYCCAT
Trigger: AGTCGCACAGCAGTAGCATCCTGGAGGTAGACTCCACAGCATCCATGGGTGGCTGGACAAAGAGTCAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 72 bp CACCAGAGAAAGGCTGACTCTTTGTCCAGCCACCCATaGATGCTGTGGAGTCTACCTCCAGGATGCTACTGC +
Preference number: 6 (lower is better)
Translates to: HQRKADSLSSHP*MLWSLPPGCYC
Trigger: GCAGTAGCATCCTGGAGGTAGACTCCACAGCATCCATGGGTGGCTGGACAAAGAGTCAGCCTTTCTCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CAA 72 bp TGGAGTCTACCTCCAGGATGCTACTGCTGTGCGACTTaGGGATATGACGCCAGGAAGGAACCAACCCAGCTG +
Preference number: 6 (lower is better)
Translates to: WSLPPGCYCCAT*GYDARKEPTQL
Trigger: CAGCTGGGTTGGTTCCTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGTAGCATCCTGGAGGTAGACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CAA 90 bp TCTTCCCCTGGCATTCATAAACTAACATGGTTCCCAAGCACTACCTaGTTGGCTGAGAGAGAGTCCCCGCCTGTGTTGGGAGGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: SSPGIHKLTWFPSTT*LAERESPPVLGGRL
Trigger: CAGCCTGCCTCCCAACACAGGCGGGGACTCTCTCTCAGCCAACAAGGTAGTGCTTGGGAACCATGTTAGTTTATGAATGCCAGGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498143.5
CDS TCA 72 bp CTCATTGCTGAGGCCTTTGCTGGGGGCTATGGAGGTTaGGCTTCGAGGTGCAAACATCCCTTGTACACTACC +
Preference number: 6 (lower is better)
Translates to: LIAEAFAGGYGG*ASRCKHPLYTT
Trigger: GGTAGTGTACAAGGGATGTTTGCACCTCGAAGCTCAACCTCCATAGCCCCCAGCAAAGGCCTCAGCAATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000413442.5
ENST00000422491.7
ENST00000433394.1
ENST00000451492.5
ENST00000461520.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS TCA 72 bp GTGTCAGAGAGCTGTAGTCCCAGCCAATCAGGAGGCTaGGGTGGGAAGGAATTACTTGAGCCTAGGAGTTCG +
Preference number: 6 (lower is better)
Translates to: VSESCSPSQSGG*GGKELLEPRSS
Trigger: CGAACTCCTAGGCTCAAGTAATTCCTTCCCACCTCAGCCTCCTGATTGGCTGGGACTACAGCTCTCTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433394.1
CDS GCA 72 bp CCATGGATGCTGTGGAGTCTACCTCCAGGATGCTACTaGTGTGCGACTTTGGGATATGACGCCAGGAAGGAA +
Preference number: 6 (lower is better)
Translates to: PWMLWSLPPGCY*CATLGYDARKE
Trigger: TTCCTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGTAGCATCCTGGAGGTAGACTCCACAGCATCCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 72 bp AGAGAAAGGCTGACTCTTTGTCCAGCCACCCATGGATaGTGTGGAGTCTACCTCCAGGATGCTACTGCTGTG +
Preference number: 6 (lower is better)
Translates to: RERLTLCPATHG*CGVYLQDATAV
Trigger: CACAGCAGTAGCATCCTGGAGGTAGACTCCACAGCATCCATGGGTGGCTGGACAAAGAGTCAGCCTTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 72 bp GGCTGCTGTGGTGATTGCTGCTGCTGCATGCGATCCTaGAGGCTCCGTGCTTTTCGAATACTGATTTGCAAC +
Preference number: 6 (lower is better)
Translates to: GCCGDCCCCMRS*RLRAFRILICN
Trigger: GTTGCAAATCAGTATTCGAAAAGCACGGAGCCTGCAGGATCGCATGCAGCAGCAGCAATCACCACAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 72 bp GCTGCTCACCTGAATCTTCACTGTCGTAGCATGTCCTaGTGTATGACTGGAACTCAGCTTGGGGAGGCAGGT +
Preference number: 6 (lower is better)
Translates to: AAHLNLHCRSMS*CMTGTQLGEAG
Trigger: ACCTGCCTCCCCAAGCTGAGTTCCAGTCATACAGCAGGACATGCTACGACAGTGAAGATTCAGGTGAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461520.5
CDS TCA 72 bp CTGCATAAAGCAGCAGCAGGGGCTGATAATGCCCCTTaGTGCATTTGGTCACCACATCCTTCCATTTGGGCC +
Preference number: 6 (lower is better)
Translates to: LHKAAAGADNAP*CIWSPHPSIWA
Trigger: GGCCCAAATGGAAGGATGTGGTGACCAAATGCATCAAGGGGCATTATCAGCCCCTGCTGCTGCTTTATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000461520.5
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS TCA 72 bp ACCTCCAGGATGCTACTGCTGTGCGACTTTGGGATATaGCGCCAGGAAGGAACCAACCCAGCTGATCTCTTA +
Preference number: 6 (lower is better)
Translates to: TSRMLLLCDFGI*RQEGTNPADLL
Trigger: TAAGAGATCAGCTGGGTTGGTTCCTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGTAGCATCCTGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 72 bp CTGATTTGCAACTTCTTATCGACTAGGGCTCTGCTGTaGGTGCTACAGCTGGCACCATGCAGGGCAAGTCTT +
Preference number: 6 (lower is better)
Translates to: LICNFLSTRALL*VLQLAPCRASL
Trigger: AAGACTTGCCCTGCATGGTGCCAGCTGTAGCACGCACAGCAGAGCCCTAGTCGATAAGAAGTTGCAAATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 72 bp TCAGGTGTCCTGAATCTTCACTGTCGTAGCATGTCCTaGTGTATGACTGGAACTCAGCTTGGGGAGGCAGGT +
Preference number: 6 (lower is better)
Translates to: SGVLNLHCRSMS*CMTGTQLGEAG
Trigger: ACCTGCCTCCCCAAGCTGAGTTCCAGTCATACAGCAGGACATGCTACGACAGTGAAGATTCAGGACACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497106.5
CDS CCA 72 bp TCTCCGTTGAGGAATCTGTTCGAGTGTCACTTGAGATaGAGGGCTCCCTCCCTGAATCTTCACTGTCGTAGC +
Preference number: 6 (lower is better)
Translates to: SPLRNLFECHLR*RAPSLNLHCRS
Trigger: GCTACGACAGTGAAGATTCAGGGAGGGAGCCCTCCATCTCAAGTGACACTCGAACAGATTCCTCAACGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 72 bp CTGGCCCCAAACTCTGTATCCATGCCGGATTCCAGTTaGGCCTCTTGGCTTAACAATACTTGGAGCGGGATA +
Preference number: 6 (lower is better)
Translates to: LAPNSVSMPDSS*ASWLNNTWSGI
Trigger: TATCCCGCTCCAAGTATTGTTAAGCCAAGAGGCCCAACTGGAATCCGGCATGGATACAGAGTTTGGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000680396.1
ENST00000681793.1
CDS CAA 72 bp TCATCGCCTTTCCTCCTAACCCGACCAGAGCTCCTCTaGCGCTCTATCAGTGACCCTTTCTTGGATGTGTGT +
Preference number: 6 (lower is better)
Translates to: SSPFLLTRPELL*RSISDPFLDVC
Trigger: ACACACATCCAAGAAAGGGTCACTGATAGAGCGCAAGAGGAGCTCTGGTCGGGTTAGGAGGAAAGGCGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 72 bp TTTGCAACTTCTTATCGACTAGGGCTCTGCTGTGCGTaGTACAGCTGGCACCATGCAGGGCAAGTCTTAGTT +
Preference number: 6 (lower is better)
Translates to: FATSYRLGLCCA*YSWHHAGQVLV
Trigger: AACTAAGACTTGCCCTGCATGGTGCCAGCTGTAGCACGCACAGCAGAGCCCTAGTCGATAAGAAGTTGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 72 bp CGATCCTGCAGGCTCCGTGCTTTTCGAATACTGATTTaGAACTTCTTATCGACTAGGGCTCTGCTGTGCGTG +
Preference number: 6 (lower is better)
Translates to: RSCRLRAFRILI*NFLSTRALLCV
Trigger: CACGCACAGCAGAGCCCTAGTCGATAAGAAGTTGCAAATCAGTATTCGAAAAGCACGGAGCCTGCAGGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 72 bp CCGGATTCCAGTTGGGCCTCTTGGCTTAACAATACTTaGAGCGGGATAGGCTGTTCACCTGATTCTGCAGTT +
Preference number: 6 (lower is better)
Translates to: PDSSWASWLNNT*SGIGCSPDSAV
Trigger: AACTGCAGAATCAGGTGAACAGCCTATCCCGCTCCAAGTATTGTTAAGCCAAGAGGCCCAACTGGAATCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418501.5
ENST00000497106.5
CDS CAA 72 bp GGCATTCATAAACTAACATGGTTCCCAAGCACTACCTaGTTGGCTGAGAGAGAGTCCCCGCCTGTGTTGGGA +
Preference number: 6 (lower is better)
Translates to: GIHKLTWFPSTT*LAERESPPVLG
Trigger: TCCCAACACAGGCGGGGACTCTCTCTCAGCCAACAAGGTAGTGCTTGGGAACCATGTTAGTTTATGAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498143.5
CDS CAA 90 bp GAAGTTCTGTTCTGGCTTCATGGAGACCATGCTCCATTTCTGCTGTaGAAGTCTTTGAGAGACCAGGATCATGGGCTGAGTGCAACCTCC +
Preference number: 6 (lower is better)
Translates to: EVLFWLHGDHAPFLL*KSLRDQDHGLSATS
Trigger: GGAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAATGGAGCATGGTCTCCATGAAGCCAGAACAGAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS TCA 72 bp TTCTGCAGTTCATCCAAGTCCATGAAGCGGCTAGGATaGGGGTTAAACCCTTTCGCTGCCTCTAACTCCTTC +
Preference number: 6 (lower is better)
Translates to: FCSSSKSMKRLG*GLNPFAASNSF
Trigger: GAAGGAGTTAGAGGCAGCGAAAGGGTTTAACCCTCATCCTAGCCGCTTCATGGACTTGGATGAACTGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS TCA 72 bp GCATGCGATCCTGCAGGCTCCGTGCTTTTCGAATACTaGTTTGCAACTTCTTATCGACTAGGGCTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: ACDPAGSVLFEY*FATSYRLGLCC
Trigger: ACAGCAGAGCCCTAGTCGATAAGAAGTTGCAAATCAGTATTCGAAAAGCACGGAGCCTGCAGGATCGCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 72 bp ACTAGGGCTCTGCTGTGCGTGCTACAGCTGGCACCATaGAGGGCAAGTCTTAGTTTAGAGATAGCTTCATTA +
Preference number: 6 (lower is better)
Translates to: TRALLCVLQLAP*RASLSLEIASL
Trigger: TAATGAAGCTATCTCTAAACTAAGACTTGCCCTGCATGGTGCCAGCTGTAGCACGCACAGCAGAGCCCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339859.8
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 72 bp TCTCTCCCCTTCAGTCGCCAAGACAATGAGAGCTCTTaGTACAGAATACTCATGGTCATTTCTTCCCCTGGC +
Preference number: 6 (lower is better)
Translates to: SLPFSRQDNESS*YRILMVISSPG
Trigger: GCCAGGGGAAGAAATGACCATGAGTATTCTGTAGCAAGAGCTCTCATTGTCTTGGCGACTGAAGGGGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498143.5
CDS CCA 72 bp CCCAGGCTGTGGATAACATCTTCTGCTAAGTCTGAGTaGTCTGAGTCCCATACCAGCCCAATCGTGATAATC +
Preference number: 6 (lower is better)
Translates to: PRLWITSSAKSE*SESHTSPIVII
Trigger: GATTATCACGATTGGGCTGGTATGGGACTCAGACCACTCAGACTTAGCAGAAGATGTTATCCACAGCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000461520.5
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 72 bp AACTCTGTATCCATGCCGGATTCCAGTTGGGCCTCTTaGCTTAACAATACTTGGAGCGGGATAGGCTGTTCA +
Preference number: 6 (lower is better)
Translates to: NSVSMPDSSWAS*LNNTWSGIGCS
Trigger: TGAACAGCCTATCCCGCTCCAAGTATTGTTAAGCCAAGAGGCCCAACTGGAATCCGGCATGGATACAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000680396.1
ENST00000681793.1
CDS TCA 72 bp GCTGGCATTCTGCAGCAGCTCACCAAACATGCTTGGTaGAGGTTTCTCTCGTCTTTCCAGCATACAAATAGC +
Preference number: 6 (lower is better)
Translates to: AGILQQLTKHAW*RFLSSFQHTNS
Trigger: GCTATTTGTATGCTGGAAAGACGAGAGAAACCTTCACCAAGCATGTTTGGTGAGCTGCTGCAGAATGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000461520.5
ENST00000492357.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS TCA 72 bp CCTAACCCGACCAGAGCTCCTCTTGCGCTCTATCAGTaGCCCTTTCTTGGATGTGTGTTTCTGATTACATTC +
Preference number: 6 (lower is better)
Translates to: PNPTRAPLALYQ*PFLGCVFLITF
Trigger: GAATGTAATCAGAAACACACATCCAAGAAAGGGTCACTGATAGAGCGCAAGAGGAGCTCTGGTCGGGTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS TCA 72 bp CCATGTGGGACGATACTTGCTGGAAGAACTGGATTTTaGCTCACTGCTGGTACTCTCTATTTCCCAGTCACG +
Preference number: 6 (lower is better)
Translates to: PCGTILAGRTGF*LTAGTLYFPVT
Trigger: CGTGACTGGGAAATAGAGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000480210.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS TCA 72 bp GTAGTCAAGGGACTCAGGTATCCTCCTAGATCAAGATaGCAGAGCCCTCCCTCACTTGTTCCAAACAATCTC +
Preference number: 6 (lower is better)
Translates to: VVKGLRYPPRSR*QSPPSLVPNNL
Trigger: GAGATTGTTTGGAACAAGTGAGGGAGGGCTCTGTCATCTTGATCTAGGAGGATACCTGAGTCCCTTGACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000498143.5
ENST00000498213.1
ENST00000680396.1
ENST00000681793.1
CDS GCA 72 bp GAGATTCTCGTTTGGGTCTCCATGTGGGACGATACTTaGTGGAAGAACTGGATTTTGACTCACTGCTGGTAC +
Preference number: 6 (lower is better)
Translates to: EILVWVSMWDDT*WKNWILTHCWY
Trigger: GTACCAGCAGTGAGTCAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACATGGAGACCCAAACGAGAATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000480210.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 72 bp TGGGAAGTTTCACCCCTGTCACACATAGCCAGAAACTaGTGGACACTCCTTGAAGTTCTGTTCTGGCTTCAT +
Preference number: 6 (lower is better)
Translates to: WEVSPLSHIARN*WTLLEVLFWLH
Trigger: ATGAAGCCAGAACAGAACTTCAAGGAGTGTCCAGCAGTTTCTGGCTATGTGTGACAGGGGTGAAACTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680396.1
CDS CCA 72 bp TCATCCATAATTCCCAGCTGGAAACGTTGTTCATCCTaGAAAGTCTTTGCCAGAGCACTGCGGAGAGTGTCA +
Preference number: 6 (lower is better)
Translates to: SSIIPSWKRCSS*KVFARALRRVS
Trigger: TGACACTCTCCGCAGTGCTCTGGCAAAGACTTTCCAGGATGAACAACGTTTCCAGCTGGGAATTATGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339859.8
ENST00000413442.5
ENST00000422491.7
ENST00000451492.5
ENST00000461520.5
ENST00000481991.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CAA 72 bp TGGTGCTGGCATTCTGCAGCAGCTCACCAAACATGCTaGGTGAAGGTTTCTCTCGTCTTTCCAGCATACAAA +
Preference number: 6 (lower is better)
Translates to: WCWHSAAAHQTC*VKVSLVFPAYK
Trigger: TTTGTATGCTGGAAAGACGAGAGAAACCTTCACCAAGCATGTTTGGTGAGCTGCTGCAGAATGCCAGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000461520.5
ENST00000492357.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CAA 72 bp ACTCATGGTGGGAATGTTTGTAGGGATAGCTCTCCGTaGAGGAATCTGTTCGAGTGTCACTTGAGATGGAGG +
Preference number: 6 (lower is better)
Translates to: THGGNVCRDSSP*RNLFECHLRWR
Trigger: CCTCCATCTCAAGTGACACTCGAACAGATTCCTCAACGGAGAGCTATCCCTACAAACATTCCCACCATGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CAA 90 bp GTTTGGGTCTCCATGTGGGACGATACTTGCTGGAAGAACTGGATTTaGACTCACTGCTGGTACTCTCTATTTCCCAGTCACGAGAGTGTA +
Preference number: 6 (lower is better)
Translates to: VWVSMWDDTCWKNWI*THCWYSLFPSHESV
Trigger: TACACTCTCGTGACTGGGAAATAGAGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACATGGAGACCCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000480210.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CAA 90 bp ACTGTCTCTTTAAAATCTCTCAGCCTGTTGGTGCTGCTGGATGGTTaGGAGGCATTTCTAGGAGCCTGCTTCTCTTTCAGTGTTTCTCCT +
Preference number: 6 (lower is better)
Translates to: TVSLKSLSLLVLLDG*EAFLGACFSFSVSP
Trigger: AGGAGAAACACTGAAAGAGAAGCAGGCTCCTAGAAATGCCTCCAAACCATCCAGCAGCACCAACAGGCTGAGAGATTTTAAAGAGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS TCA 72 bp AGAGCGCAAAAGATGCAGGAATCTCCCATGCACTTGTaGGTTGTAAGCTGCCTAAAGCTACGTCGGAAGATA +
Preference number: 6 (lower is better)
Translates to: RAQKMQESPMHL*VVSCLKLRRKI
Trigger: TATCTTCCGACGTAGCTTTAGGCAGCTTACAACTCACAAGTGCATGGGAGATTCCTGCATCTTTTGCGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000413442.5
ENST00000422491.7
ENST00000433394.1
ENST00000451492.5
ENST00000461520.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 72 bp AACGTTGTTCATCCTGGAAAGTCTTTGCCAGAGCACTaGGGAGAGTGTCAGATGGAAGCACTTTTTCACTAC +
Preference number: 6 (lower is better)
Translates to: NVVHPGKSLPEH*GECQMEALFHY
Trigger: GTAGTGAAAAAGTGCTTCCATCTGACACTCTCCGCAGTGCTCTGGCAAAGACTTTCCAGGATGAACAACGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339859.8
ENST00000413442.5
ENST00000422491.7
ENST00000451492.5
ENST00000461520.5
ENST00000481991.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS GCA 72 bp AATGGAAGAAAGAACTGGCCCCAAACTCTGTATCCATaGCGGATTCCAGTTGGGCCTCTTGGCTTAACAATA +
Preference number: 6 (lower is better)
Translates to: NGRKNWPQTLYP*RIPVGPLGLTI
Trigger: TATTGTTAAGCCAAGAGGCCCAACTGGAATCCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 72 bp GCAGTGAGAGCCTACATTGGTCTGAGAAGCCAGGGATaGTCTGTTATGGATCATATTGCTGACTGTCTCTTT +
Preference number: 6 (lower is better)
Translates to: AVRAYIGLRSQG*SVMDHIADCLF
Trigger: AAAGAGACAGTCAGCAATATGATCCATAACAGACCATCCCTGGCTTCTCAGACCAATGTAGGCTCTCACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 72 bp ATTCTCGTTTGGGTCTCCATGTGGGACGATACTTGCTaGAAGAACTGGATTTTGACTCACTGCTGGTACTCT +
Preference number: 6 (lower is better)
Translates to: ILVWVSMWDDTC*KNWILTHCWYS
Trigger: AGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACATGGAGACCCAAACGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000480210.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CAA 72 bp TTAAAATCTCTCAGCCTGTTGGTGCTGCTGGATGGTTaGGAGGCATTTCTAGGAGCCTGCTTCTCTTTCAGT +
Preference number: 6 (lower is better)
Translates to: LKSLSLLVLLDG*EAFLGACFSFS
Trigger: ACTGAAAGAGAAGCAGGCTCCTAGAAATGCCTCCAAACCATCCAGCAGCACCAACAGGCTGAGAGATTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CAA 72 bp TCCATGTGGGACGATACTTGCTGGAAGAACTGGATTTaGACTCACTGCTGGTACTCTCTATTTCCCAGTCAC +
Preference number: 6 (lower is better)
Translates to: SMWDDTCWKNWI*THCWYSLFPSH
Trigger: GTGACTGGGAAATAGAGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000480210.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CAA 72 bp AGAGATTCTCGTTTGGGTCTCCATGTGGGACGATACTaGCTGGAAGAACTGGATTTTGACTCACTGCTGGTA +
Preference number: 6 (lower is better)
Translates to: RDSRLGLHVGRY*LEELDFDSLLV
Trigger: TACCAGCAGTGAGTCAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACATGGAGACCCAAACGAGAATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000480210.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CAA 90 bp TTATGGATCATATTGCTGACTGTCTCTTTAAAATCTCTCAGCCTGTaGGTGCTGCTGGATGGTTTGGAGGCATTTCTAGGAGCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: LWIILLTVSLKSLSL*VLLDGLEAFLGACF
Trigger: GAAGCAGGCTCCTAGAAATGCCTCCAAACCATCCAGCAGCACCAACAGGCTGAGAGATTTTAAAGAGACAGTCAGCAATATGATCCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS TCA 72 bp CGCTCTATCAGTGACCCTTTCTTGGATGTGTGTTTCTaGTTACATTCACTATCAGTCAGGTGTCCTGTGTCC +
Preference number: 6 (lower is better)
Translates to: RSISDPFLDVCF*LHSLSVRCPVS
Trigger: GGACACAGGACACCTGACTGATAGTGAATGTAATCAGAAACACACATCCAAGAAAGGGTCACTGATAGAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 72 bp GAAAGTCTTTGCCAGAGCACTGCGGAGAGTGTCAGATaGAAGCACTTTTTCACTACTACACTGAAACTGGTT +
Preference number: 6 (lower is better)
Translates to: ESLCQSTAESVR*KHFFTTTLKLV
Trigger: AACCAGTTTCAGTGTAGTAGTGAAAAAGTGCTTCCATCTGACACTCTCCGCAGTGCTCTGGCAAAGACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339859.8
ENST00000413442.5
ENST00000422491.7
ENST00000451492.5
ENST00000461520.5
ENST00000481991.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 72 bp ACTTATGGTTTTCCCACAGACAGTATCCTCAGGGTATaGGAAAGAGTAGGGGAAGACTCAGTAGTAATAGAC +
Preference number: 6 (lower is better)
Translates to: TYGFPTDSILRV*ERVGEDSVVID
Trigger: GTCTATTACTACTGAGTCTTCCCCTACTCTTTCCCATACCCTGAGGATACTGTCTGTGGGAAAACCATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464635.1
CDS CAA 72 bp CCAAGTAGGTGGCTCACATTGCTGCAAGAGACAATGTaGCTGTTCAAAGGCCAAACAATACCTGTAGACATT +
Preference number: 6 (lower is better)
Translates to: PSRWLTLLQETM*LFKGQTIPVDI
Trigger: AATGTCTACAGGTATTGTTTGGCCTTTGAACAGCAACATTGTCTCTTGCAGCAATGTGAGCCACCTACTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480210.1
CDS CAA 90 bp TCAATATTCAGAGATTCTCGTTTGGGTCTCCATGTGGGACGATACTaGCTGGAAGAACTGGATTTTGACTCACTGCTGGTACTCTCTATT +
Preference number: 6 (lower is better)
Translates to: SIFRDSRLGLHVGRY*LEELDFDSLLVLSI
Trigger: AATAGAGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACATGGAGACCCAAACGAGAATCTCTGAATATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000480210.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS TCA 72 bp AGAGTGTCAGATGGAAGCACTTTTTCACTACTACACTaGAACTGGTTAAAGATTCCCATGTTGTCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: RVSDGSTFSLLH*NWLKIPMLSRL
Trigger: CAGCCTGGACAACATGGGAATCTTTAACCAGTTTCAGTGTAGTAGTGAAAAAGTGCTTCCATCTGACACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481991.1
CDS TCA 72 bp CGCTCTATCAGTGACCCTTTCTTGGATGTGTGTTTCTaGTTACATTCACTATCAGTCAGGTGTCCTGAATCT +
Preference number: 6 (lower is better)
Translates to: RSISDPFLDVCF*LHSLSVRCPES
Trigger: AGATTCAGGACACCTGACTGATAGTGAATGTAATCAGAAACACACATCCAAGAAAGGGTCACTGATAGAGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497106.5
CDS CCA 72 bp TGTCAATATTCAGAGATTCTCGTTTGGGTCTCCATGTaGGACGATACTTGCTGGAAGAACTGGATTTTGACT +
Preference number: 6 (lower is better)
Translates to: CQYSEILVWVSM*DDTCWKNWILT
Trigger: AGTCAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACATGGAGACCCAAACGAGAATCTCTGAATATTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000480210.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 72 bp GGGGCTTGGTCCACCAAATTTAATGTCGTAAGAAGGTaGCTTGCTTGGTTCATCTGGTATAAATTCTTTAGC +
Preference number: 6 (lower is better)
Translates to: GAWSTKFNVVRR*LAWFIWYKFFS
Trigger: GCTAAAGAATTTATACCAGATGAACCAAGCAAGCCACCTTCTTACGACATTAAATTTGGTGGACCAAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339859.8
ENST00000418501.5
ENST00000422491.7
ENST00000424265.5
ENST00000466048.6
ENST00000480210.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CAA 72 bp TCTTGCTGCTTCTTTTTAATGTGCCCCAAACTTCTATaGTCCCATCCAGATCTTCAGCAAGTCTCTCCTCTT +
Preference number: 6 (lower is better)
Translates to: SCCFFLMCPKLL*SHPDLQQVSPL
Trigger: AAGAGGAGAGACTTGCTGAAGATCTGGATGGGACAATAGAAGTTTGGGGCACATTAAAAAGAAGCAGCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000433394.1
ENST00000474929.1
ENST00000498143.5
ENST00000498213.1
ENST00000680396.1
ENST00000681793.1
CDS CAA 72 bp GACCCCCTGAAAAATAATTTCTCTTCCAAGACATTATaGTTCACATTTAGCAGCTCCTGGCGCCGCATACTT +
Preference number: 6 (lower is better)
Translates to: DPLKNNFSSKTL*FTFSSSWRRIL
Trigger: AAGTATGCGGCGCCAGGAGCTGCTAAATGTGAACAATAATGTCTTGGAAGAGAAATTATTTTTCAGGGGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000422491.7
CDS TCA 72 bp AGAGTGTCAGATGGAAGCACTTTTTCACTACTACACTaGAACTGGTTAAAGATTCCCTTGAGAGCGCAAAAG +
Preference number: 6 (lower is better)
Translates to: RVSDGSTFSLLH*NWLKIPLRAQK
Trigger: CTTTTGCGCTCTCAAGGGAATCTTTAACCAGTTTCAGTGTAGTAGTGAAAAAGTGCTTCCATCTGACACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000413442.5
ENST00000422491.7
ENST00000451492.5
ENST00000461520.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS TCA 72 bp ACCACATCCTTCCATTTGGGCCCAATCTCCTTGACATaGGCATCATCAAAATACATCCATTTGCGAATCTTT +
Preference number: 6 (lower is better)
Translates to: TTSFHLGPISLT*ASSKYIHLRIF
Trigger: AAAGATTCGCAAATGGATGTATTTTGATGATGCTCATGTCAAGGAGATTGGGCCCAAATGGAAGGATGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000424265.5
ENST00000461520.5
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CCA 72 bp GGGAAATGCAGTGTTGGGCAGTACATATATCCTCTTTaGTTTCATCAGCAATGTGGAAGTGAATTCTCATCA +
Preference number: 6 (lower is better)
Translates to: GKCSVGQYIYPL*FHQQCGSEFSS
Trigger: TGATGAGAATTCACTTCCACATTGCTGATGAAACCAAAGAGGATATATGTACTGCCCAACACTGCATTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000413442.5
ENST00000422491.7
ENST00000461520.5
ENST00000481991.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS CAA 72 bp GACCCCCTGAAAAATAATTTCTCTTCCAAGACATTATaGTTCACATTTAGCCAGACAGCACAGTCAACCTCC +
Preference number: 6 (lower is better)
Translates to: DPLKNNFSSKTL*FTFSQTAQSTS
Trigger: GGAGGTTGACTGTGCTGTCTGGCTAAATGTGAACAATAATGTCTTGGAAGAGAAATTATTTTTCAGGGGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000413442.5
ENST00000451492.5
CDS CAA 90 bp CTGCTCAAACAATGTCATTGCAAATTTCTGATGGGAAATGCAGTGTaGGGCAGTACATATATCCTCTTTGGTTTCATCAGCAATGTGGAA +
Preference number: 6 (lower is better)
Translates to: LLKQCHCKFLMGNAV*GSTYILFGFISNVE
Trigger: TTCCACATTGCTGATGAAACCAAAGAGGATATATGTACTGCCCAACACTGCATTTCCCATCAGAAATTTGCAATGACATTGTTTGAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000461520.5
ENST00000481991.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS TCA 72 bp CATATATCCTCTTTGGTTTCATCAGCAATGTGGAAGTaGATTCTCATCAGGAGGTTTTCAAAGCACTCTGCA +
Preference number: 6 (lower is better)
Translates to: HISSLVSSAMWK*ILIRRFSKHSA
Trigger: TGCAGAGTGCTTTGAAAACCTCCTGATGAGAATTCACTTCCACATTGCTGATGAAACCAAAGAGGATATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339859.8
ENST00000413442.5
ENST00000422491.7
ENST00000461520.5
ENST00000481991.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS TCA 72 bp CATACACACTGCTCAAACAATGTCATTGCAAATTTCTaGTGGGAAATGCAGTGTTGGGCAGTACATATATCC +
Preference number: 6 (lower is better)
Translates to: HTHCSNNVIANF*WEMQCWAVHIS
Trigger: GGATATATGTACTGCCCAACACTGCATTTCCCATCAGAAATTTGCAATGACATTGTTTGAGCAGTGTGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000461520.5
ENST00000481991.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1
CDS TCA 72 bp TTGTCTCATCATCCTCTGAAGCAAAAACTCAAATTCTaGGCAACTGCAAAAGGTTCCACAAAGCCAAGAAGA +
Preference number: 6 (lower is better)
Translates to: LSHHPLKQKLKF*ATAKGSTKPRR
Trigger: TCTTCTTGGCTTTGTGGAACCTTTTGCAGTTGCTCAGAATTTGAGTTTTTGCTTCAGAGGATGATGAGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000433394.1
ENST00000498143.5
ENST00000498213.1
ENST00000680396.1
ENST00000681793.1
CDS TCA 72 bp AATCAAACATTAATGTACATTCCTAACTCACACATTTaGCTTTCTTCCTCTGCCCCCTATACCAAAGCCCCT +
Preference number: 6 (lower is better)
Translates to: NQTLMYIPNSHI*LSSSAPYTKAP
Trigger: AGGGGCTTTGGTATAGGGGGCAGAGGAAGAAAGTCAAATGTGTGAGTTAGGAATGTACATTAATGTTTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492357.1
CDS CAA 72 bp CAATGTCATTGCAAATTTCTGATGGGAAATGCAGTGTaGGGCAGTACATATATCCTCTTTGGTTTCATCAGC +
Preference number: 6 (lower is better)
Translates to: QCHCKFLMGNAV*GSTYILFGFIS
Trigger: GCTGATGAAACCAAAGAGGATATATGTACTGCCCAACACTGCATTTCCCATCAGAAATTTGCAATGACATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339859.8
ENST00000422491.7
ENST00000461520.5
ENST00000481991.1
ENST00000497106.5
ENST00000498143.5
ENST00000680396.1
ENST00000681793.1