RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP53 (Homo sapiens)

Ensembl gene IDs: ENSG00000145390

Ensembl transcript IDs: ENST00000274030.10, ENST00000450251.5, ENST00000507906.5, ENST00000509769.5, ENST00000514305.5, ENST00000514665.1

Found 363 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTAGTTCTGGTTGGCAAAATGCATCAATGGCACCTGAGTTTGCCTaGAAATCGTTAGTTGAGGAGCTGGATGGACAGTTTGGTGTGTTG +
Preference number: 1 (lower is better)
Translates to: SSSGWQNASMAPEFA*KSLVEELDGQFGVL
Trigger: CAACACACCAAACTGTCCATCCAGCTCCTCAACTAACGATTTTCAGGCAAACTCAGGTGCCATTGATGCATTTTGCCAACCAGAACTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR TCA 90 bp TACAGGCTTTTCACATCCCATATTTTCTGCAACAGATTTGTAATGTaGCCAGCTGATGACCTGCCTGAGTGCATCCTCAGTAGAAACTGC +
Preference number: 1 (lower is better)
Translates to: YRLFTSHIFCNRFVM*PADDLPECILSRNC
Trigger: GCAGTTTCTACTGAGGATGCACTCAGGCAGGTCATCAGCTGGTCACATTACAAATCTGTTGCAGAAAATATGGGATGTGAAAAGCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR TCA 90 bp CCATCGATAACAGGTGAGTCCAAATTAGTAGAACCATTACTGATGTaGTCACTGCTTTCATATCCAGACTCAGTCCTTTGCATCTGCCAA +
Preference number: 1 (lower is better)
Translates to: PSITGESKLVEPLLM*SLLSYPDSVLCICQ
Trigger: TTGGCAGATGCAAAGGACTGAGTCTGGATATGAAAGCAGTGATCACATCAGTAATGGTTCTACTAATTTGGACTCACCTGTTATCGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR TCA 90 bp AAACACCTCTGTAAGTTTGACATCAGGTGTAGATTCGCTTTTCTCTaGCTGTGGCACACTGGTTATAGCATATTTCTTTGGTGGCAAAGG +
Preference number: 1 (lower is better)
Translates to: KHLCKFDIRCRFAFL*LWHTGYSIFLWWQR
Trigger: CCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTCAGAGAAAAGCGAATCTACACCTGATGTCAAACTTACAGAGGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR CCA 90 bp TTCCCATGTTGTTTAAAACCATTTGGGGCAGGAGGTGATCCAGATTaGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCT +
Preference number: 1 (lower is better)
Translates to: FPCCLKPFGAGGDPD*KCERSSSTKSLCRP
Trigger: AGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCCAATCTGGATCACCTCCTGCCCCAAATGGTTTTAAACAACATGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR GCA 90 bp CTTTCATATCCAGACTCAGTCCTTTGCATCTGCCAATTATCACCATaGACTTTACCCTCTACAAGGCCTTTATTTTTCTCTGCTCCTTTT +
Preference number: 1 (lower is better)
Translates to: LSYPDSVLCICQLSP*TLPSTRPLFFSAPF
Trigger: AAAAGGAGCAGAGAAAAATAAAGGCCTTGTAGAGGGTAAAGTGCATGGTGATAATTGGCAGATGCAAAGGACTGAGTCTGGATATGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR TCA 90 bp AACACCACTGATATCCATTACTGTACCATTTCCATCGATAACAGGTaGGTCCAAATTAGTAGAACCATTACTGATGTGATCACTGCTTTC +
Preference number: 1 (lower is better)
Translates to: NTTDIHYCTISIDNR*VQISRTITDVITAF
Trigger: GAAAGCAGTGATCACATCAGTAATGGTTCTACTAATTTGGACTCACCTGTTATCGATGGAAATGGTACAGTAATGGATATCAGTGGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR GCA 90 bp ATTATCACCATGCACTTTACCCTCTACAAGGCCTTTATTTTTCTCTaGTCCTTTTCCATTAGATTCAAGGGAACTTCTGCTTCCTATTTC +
Preference number: 1 (lower is better)
Translates to: IITMHFTLYKAFIFL*SFSIRFKGTSASYF
Trigger: GAAATAGGAAGCAGAAGTTCCCTTGAATCTAATGGAAAAGGAGCAGAGAAAAATAAAGGCCTTGTAGAGGGTAAAGTGCATGGTGATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR CCA 90 bp TCTGTTCATCTGACTGGTGGATATGTTCTCTTGCATTATGGTCCTTaGGTATTTGTAGACTGGATGAAGGAAATAACTTTCCATTGTCTT +
Preference number: 1 (lower is better)
Translates to: SVHLTGGYVLLHYGP*VFVDWMKEITFHCL
Trigger: AAGACAATGGAAAGTTATTTCCTTCATCCAGTCTACAAATACCCAAGGACCATAATGCAAGAGAACATATCCACCAGTCAGATGAACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR CCA 90 bp TCAAGTTTCTGTTCATCTGACTGGTGGATATGTTCTCTTGCATTATaGTCCTTGGGTATTTGTAGACTGGATGAAGGAAATAACTTTCCA +
Preference number: 1 (lower is better)
Translates to: SSFCSSDWWICSLAL*SLGICRLDEGNNFP
Trigger: TGGAAAGTTATTTCCTTCATCCAGTCTACAAATACCCAAGGACCATAATGCAAGAGAACATATCCACCAGTCAGATGAACAGAAACTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR TCA 90 bp CTCAGAAAATTTGCATTCATTCGGTTTTTCAAGTTTCTGTTCATCTaGCTGGTGGATATGTTCTCTTGCATTATGGTCCTTGGGTATTTG +
Preference number: 1 (lower is better)
Translates to: LRKFAFIRFFKFLFI*LVDMFSCIMVLGYL
Trigger: CAAATACCCAAGGACCATAATGCAAGAGAACATATCCACCAGTCAGATGAACAGAAACTTGAAAAACCGAATGAATGCAAATTTTCTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR CCA 90 bp TTAAAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATaGGTGAAGCCCTTTTCTGGTTACCCATTAGAAAGTGCTTCTTCA +
Preference number: 1 (lower is better)
Translates to: LKGSYAVTIIEVKNK*VKPFSGYPLESASS
Trigger: TGAAGAAGCACTTTCTAATGGGTAACCAGAAAAGGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
3UTR TCA 90 bp ATCACCTGGTACTTTTCAATTAGCATAGTTTATAATCTCCATACATaGGTACTGGTTAGTTTAATACTTCCCAGTCTACTGGCCACAAAA +
Preference number: 1 (lower is better)
Translates to: ITWYFSISIVYNLHT*VLVSLILPSLLATK
Trigger: TTTTGTGGCCAGTAGACTGGGAAGTATTAAACTAACCAGTACTCATGTATGGAGATTATAAACTATGCTAATTGAAAAGTACCAGGTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
3UTR GCA 90 bp GCTCCTTTTCCATTAGATTCAAGGGAACTTCTGCTTCCTATTTCCTaGTTCATTTCATCTTCATATATGGTCATTAAACCTTTTTGCTTT +
Preference number: 1 (lower is better)
Translates to: APFPLDSRELLLPIS*FISSSYMVIKPFCF
Trigger: AAAGCAAAAAGGTTTAATGACCATATATGAAGATGAAATGAAGCAGGAAATAGGAAGCAGAAGTTCCCTTGAATCTAATGGAAAAGGAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR GCA 90 bp GACTGTGGCACACTGGTTATAGCATATTTCTTTGGTGGCAAAGGGGGTGGTAGAGACCAGCTGATGACCTaGCTGAGTGCATCCTCAGTA +
Preference number: 2 (lower is better)
Translates to: DCGTLVIAYFFGGKGGGRDQLMT*LSASSV
Trigger: TACTGAGGATGCACTCAGGCAGGTCATCAGCTGGTC...TCTACCACCCCCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR TCA 90 bp GACTGTGGCACACTGGTTATAGCATATTTCTTTGGTGGCAAAGGGGGTGGTAGAAACAGATTTGTAATGTaGCCAGCTGATGACCTGCCT +
Preference number: 2 (lower is better)
Translates to: DCGTLVIAYFFGGKGGGRNRFVM*PADDLP
Trigger: AGGCAGGTCATCAGCTGGTCACATTACAAATCTGTT...TCTACCACCCCCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR TCA 90 bp GACTGTGGCACACTGGTTATAGCATATTTCTTTGGTGGCAAAGGGGGTGGTAGATATTTTGTTGCTGGATaGGAGGAGCAGTTTCTGGCT +
Preference number: 2 (lower is better)
Translates to: DCGTLVIAYFFGGKGGGRYFVAG*EEQFLA
Trigger: AGCCAGAAACTGCTCCTCTCATCCAGCAACAAAATA...TCTACCACCCCCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR CAA 90 bp GCTTTTACTGCTGCTATCACAGCTGTTTCCTCTATCCCTAGAATCTaGGCTGCTGTCTGTGTCATATCCAGTGCCATTGTCACTCTTAAC +
Preference number: 2 (lower is better)
Translates to: AFTAAITAVSSIPRI*AAVCVISSAIVTLN
Trigger: GTTAAGAGTGACAATGGCACTGGATATGACACAGACAGCAGCCAAGATTCTAGGGATAGAGGAAACAGCTGTGATAGCAGCAGTAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR TCA 90 bp GACTGTGGCACACTGGTTATAGCATATTTCTTTGGTGGCAAAGGGGGTGGTAGAATCAGATCTGCTGGCTaGCCGAATTATACATTCTGT +
Preference number: 2 (lower is better)
Translates to: DCGTLVIAYFFGGKGGGRIRSAG*PNYTFC
Trigger: ACAGAATGTATAATTCGGTCAGCCAGCAGATCTGAT...TCTACCACCCCCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR CCA 90 bp GACTGTGGCACACTGGTTATAGCATATTTCTTTGGTGGCAAAGGGGGTGGTAGACTATCCCTAGAATCTTaGCTGCTGTCTGTGTCATAT +
Preference number: 2 (lower is better)
Translates to: DCGTLVIAYFFGGKGGGRLSLES*LLSVSY
Trigger: ATATGACACAGACAGCAGCCAAGATTCTAGGGATAG...TCTACCACCCCCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR TCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCTTCCCTACACCTGTGTaGCTGTGGCTCCGATTAGAT +
Preference number: 2 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPFPTPV*LWLRLD
Trigger: ATCTAATCGGAGCCACAGTCACACAGGTGTAGGGAA...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR TCA 90 bp GACTGTGGCACACTGGTTATAGCATATTTCTTTGGTGGCAAAGGGGGTGGTAGATCCAGATTGGAAATGTaGAAGGTCTTCATCAACCAA +
Preference number: 2 (lower is better)
Translates to: DCGTLVIAYFFGGKGGGRSRLEM*KVFINQ
Trigger: TTGGTTGATGAAGACCTTTCACATTTCCAATCTGGA...TCTACCACCCCCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR GCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCGATGACCTGCCTGAGTaGATCCTCAGTAGAAACTGC +
Preference number: 2 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPDDLPE*ILSRNC
Trigger: GCAGTTTCTACTGAGGATGCACTCAGGCAGGTCATC...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR CAA 90 bp TGGCTGCTGTCTGTGTCATATCCAGTGCCATTGTCACTCTTAACTTaGCCAGTTATTTTCTCTCCTGGAGCAAGAATCTGGGATTTACTT +
Preference number: 2 (lower is better)
Translates to: WLLSVSYPVPLSLLT*PVIFSPGARIWDLL
Trigger: AAGTAAATCCCAGATTCTTGCTCCAGGAGAGAAAATAACTGGCAAAGTTAAGAGTGACAATGGCACTGGATATGACACAGACAGCAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR TCA 90 bp GACTGTGGCACACTGGTTATAGCATATTTCTTTGGTGGCAAAGGGGGTGGTAGATCAAAGCACTCTTCATaGAAAGTAGTTGGGGTAAAA +
Preference number: 2 (lower is better)
Translates to: DCGTLVIAYFFGGKGGGRSKHSS*KVVGVK
Trigger: TTTTACCCCAACTACTTTTCATGAAGAGTGCTTTGA...TCTACCACCCCCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR GCA 90 bp GACTGTGGCACACTGGTTATAGCATATTTCTTTGGTGGCAAAGGGGGTGGTAGAATGAGATTTATAGCCTaGTTCCAAATTCCTGAGTTC +
Preference number: 2 (lower is better)
Translates to: DCGTLVIAYFFGGKGGGRMRFIA*FQIPEF
Trigger: GAACTCAGGAATTTGGAAGCAGGCTATAAATCTCAT...TCTACCACCCCCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR CCA 90 bp TGGATGAGAGGAGCAGTTTCTGGCTTTAACCCAACAGTTCTTAGGTGTGAAGACCTTTGGATTCTCTTTTaGCCAATTACTAAAACTCGG +
Preference number: 2 (lower is better)
Translates to: WMRGAVSGFNPTVLRCEDLWILF*PITKTR
Trigger: CCGAGTTTTAGTAATTGGCCAAAAGAGAATCCAAAG...GTCTTCACACCTAAGAACTGTTGGGTTAAAGCCAGAAACTGCTCCTCTCATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR TCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCTCAAAAACAAATGGGTaGAGCCCTTTTCTGGTTACC +
Preference number: 2 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPSKTNG*SPFLVT
Trigger: GGTAACCAGAAAAGGGCTTCACCCATTTGTTTTTGA...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
3UTR-3UTR TCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGATGCATCAATGGCACCTaGGTTTGCCTGAAAATCGTT +
Preference number: 2 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGCINGT*VCLKIV
Trigger: AACGATTTTCAGGCAAACTCAGGTGCCATTGATGCA...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR TCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCGAGAGCTTGGGCCTCTaGTGGTATTTCAATCTATAT +
Preference number: 2 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPESLGL*WYFNLY
Trigger: ATATAGATTGAAATACCATCAGAGGCCCAAGCTCTC...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR GCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCTCAGTCCTTTGCATCTaGCAATTATCACCATGCACT +
Preference number: 2 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPSVLCI*QLSPCT
Trigger: AGTGCATGGTGATAATTGGCAGATGCAAAGGACTGA...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR GCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCTTCCCAATAAGAGGGTaGCCTACATTAATTCCTAAC +
Preference number: 2 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPFPIRG*PTLIPN
Trigger: GTTAGGAATTAATGTAGGGCACCCTCTTATTGGGAA...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
3UTR-3UTR GCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAATCCTCAGTAGAAACTaGTGTGCCATCTGGGTTTGC +
Preference number: 2 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKILSRN*CAIWVC
Trigger: GCAAACCCAGATGGCACAGCAGTTTCTACTGAGGAT...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR CCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCTTGCTTGTCGTAATCTaGTCACTGAAGCATACTGTT +
Preference number: 2 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPLLVVI*SLKHTV
Trigger: AACAGTATGCTTCAGTGACCAGATTACGACAAGCAA...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR CCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAACCCATCAGATCTGCTaGCTGACCGAATTATACATT +
Preference number: 2 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGTHQIC*LTELYI
Trigger: AATGTATAATTCGGTCAGCCAGCAGATCTGATGGGT...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR CAA 90 bp TTCTGTTCATCTGACTGGTGGATATGTTCTCTTGCATTATGGTCCTaGGGTATTTGTAGACTGGATGAAGGAAATAACTTTCCATTGTCT +
Preference number: 2 (lower is better)
Translates to: FCSSDWWICSLALWS*GICRLDEGNNFPLS
Trigger: AGACAATGGAAAGTTATTTCCTTCATCCAGTCTACAAATACCCAAGGACCATAATGCAAGAGAACATATCCACCAGTCAGATGAACAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR TCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCTATTTAAATGGCCTCTaGGAAGTAAAAGTTGGTCAG +
Preference number: 2 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPYLNGL*EVKVGQ
Trigger: CTGACCAACTTTTACTTCTCAGAGGCCATTTAAATA...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
3UTR-3UTR TCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCTCAAAGCACTCTTCATaGAAAGTAGTTGGGGTAAAA +
Preference number: 2 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPSKHSS*KVVGVK
Trigger: TTTTACCCCAACTACTTTTCATGAAGAGTGCTTTGA...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
3UTR-3UTR TCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGATCAGTTGGAAATTTCTaGTTTTCTCTCTGCTTTGCC +
Preference number: 2 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGSVGNF*FSLCFA
Trigger: GGCAAAGCAGAGAGAAAATCAGAAATTTCCAACTGA...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR GCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTCAAGGGAACTTCTaGTTCCTATTTCCTGCTTCA +
Preference number: 2 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGIQGNF*FLFPAS
Trigger: TGAAGCAGGAAATAGGAAGCAGAAGTTCCCTTGAAT...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR GCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAGTGGATATGTTCTCTTaGATTATGGTCCTTGGGTAT +
Preference number: 2 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGVDMFS*IMVLGY
Trigger: ATACCCAAGGACCATAATGCAAGAGAACATATCCAC...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR CCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCCCAAGACTTGGTAACTaGGTGAAGTTAGACTTTTAT +
Preference number: 2 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPPRLGN*VKLDFY
Trigger: ATAAAAGTCTAACTTCACCCAGTTACCAAGTCTTGG...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000450251.5
3UTR-3UTR CCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCTGTTCTCTTGCATTATaGTCCTTGGGTATTTGTAGA +
Preference number: 2 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPCSLAL*SLGICR
Trigger: TCTACAAATACCCAAGGACCATAATGCAAGAGAACA...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR CCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGATTCTGTTCATCTGACTaGTGGATATGTTCTCTTGCA +
Preference number: 2 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGFCSSD*WICSLA
Trigger: TGCAAGAGAACATATCCACCAGTCAGATGAACAGAA...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR TCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGATATTTAAATGGCCTCTaGGAAGTAAAAGTTGGTCAG +
Preference number: 2 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGYLNGL*EVKVGQ
Trigger: CTGACCAACTTTTACTTCTCAGAGGCCATTTAAATA...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
3UTR-3UTR TCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAACAACTCAACTGAGTTaGAAAGACAAATGTCTGAGA +
Preference number: 2 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGTTQLS*KDKCLR
Trigger: TCTCAGACATTTGTCTTTTCAACTCAGTTGAGTTGT...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450251.5
3UTR-3UTR TCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAAACAAAAGTAGTGGCTaGAAGTGGCATCGAATGCAT +
Preference number: 2 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKNKSSG*KWHRMH
Trigger: ATGCATTCGATGCCACTTTCAGCCACTACTTTTGTT...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR GCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCCTTAAAGGGATCATATaGAGTGACTATCATAGAAGT +
Preference number: 2 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPLKGII*SDYHRS
Trigger: ACTTCTATGATAGTCACTGCATATGATCCCTTTAAG...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
3UTR-3UTR CCA 90 bp GGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCAACTGCTGTGCCATCTaGGTTTGCATAAAACAAAAG +
Preference number: 2 (lower is better)
Translates to: GNVKGLHQPNLYVVLNLFNCCAI*VCIKQK
Trigger: CTTTTGTTTTATGCAAACCCAGATGGCACAGCAGTT...GAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR CCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAAGTTATTTTCTCTCCTaGAGCAAGAATCTGGGATTT +
Preference number: 2 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGSYFLS*SKNLGF
Trigger: AAATCCCAGATTCTTGCTCCAGGAGAGAAAATAACT...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR GCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGACTTAAAGGGATCATATaGAGTGACTATCATAGAAGT +
Preference number: 2 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGLKGII*SDYHRS
Trigger: ACTTCTATGATAGTCACTGCATATGATCCCTTTAAG...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
3UTR-3UTR CCA 90 bp GGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCCTGAGAAGTAAAAGTTaGTCAGTTTTACCAGTTATC +
Preference number: 2 (lower is better)
Translates to: GNVKGLHQPNLYVVLNLFLRSKS*SVLPVI
Trigger: GATAACTGGTAAAACTGACCAACTTTTACTTCTCAG...GAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR CAA 90 bp GACTGTGGCACACTGGTTATAGCATATTTCTTTGGTGGCAAAGGGGGTGGTAGAATGTGGATTCCCATGTaGTTTAAAACCATTTGGGGC +
Preference number: 3 (lower is better)
Translates to: DCGTLVIAYFFGGKGGGRMWIPM*FKTIWG
Trigger: GCCCCAAATGGTTTTAAACAACATGGGAATCCACAT...TCTACCACCCCCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR CAA 90 bp GACTGTGGCACACTGGTTATAGCATATTTCTTTGGTGGCAAAGGGGGTGGTAGACTTGCATTATGGTCCTaGGGTATTTGTAGACTGGAT +
Preference number: 3 (lower is better)
Translates to: DCGTLVIAYFFGGKGGGRLALWS*GICRLD
Trigger: ATCCAGTCTACAAATACCCAAGGACCATAATGCAAG...TCTACCACCCCCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR CAA 90 bp GACTGTGGCACACTGGTTATAGCATATTTCTTTGGTGGCAAAGGGGGTGGTAGAATCCATGATATTTTGTaGCTGGATGAGAGGAGCAGT +
Preference number: 3 (lower is better)
Translates to: DCGTLVIAYFFGGKGGGRIHDIL*LDERSS
Trigger: ACTGCTCCTCTCATCCAGCAACAAAATATCATGGAT...TCTACCACCCCCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR GCA 72 bp TCACTGCTTTCATATCCAGACTCAGTCCTTTGCATCTaGCAATTATCACCATGCACTTTACCCTCTACAAGG +
Preference number: 3 (lower is better)
Translates to: SLLSYPDSVLCI*QLSPCTLPSTR
Trigger: CCTTGTAGAGGGTAAAGTGCATGGTGATAATTGGCAGATGCAAAGGACTGAGTCTGGATATGAAAGCAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR TCA 72 bp ACAGGTGAGTCCAAATTAGTAGAACCATTACTGATGTaGTCACTGCTTTCATATCCAGACTCAGTCCTTTGC +
Preference number: 3 (lower is better)
Translates to: TGESKLVEPLLM*SLLSYPDSVLC
Trigger: GCAAAGGACTGAGTCTGGATATGAAAGCAGTGATCACATCAGTAATGGTTCTACTAATTTGGACTCACCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR GCA 72 bp TTTCACTCTAAGATAGTGAATTATTACAAAAGCCACTaGTCTCTGGAAAAGAGAGCTTGGGCCTCTGATGGT +
Preference number: 3 (lower is better)
Translates to: FHSKIVNYYKSH*SLEKRAWASDG
Trigger: ACCATCAGAGGCCCAAGCTCTCTTTTCCAGAGAGCAGTGGCTTTTGTAATAATTCACTATCTTAGAGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR CAA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCGTTCAGAAGGGCAGCTaGAACCAAGATTATTATGTA +
Preference number: 3 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPVQKGS*NQDYYV
Trigger: TACATAATAATCTTGGTTCAAGCTGCCCTTCTGAAC...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
3UTR-3UTR CAA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGACTGTGCCATCTGGGTTaGCATAAAACAAAAGTAGTG +
Preference number: 3 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGLCHLG*HKTKVV
Trigger: CACTACTTTTGTTTTATGCAAACCCAGATGGCACAG...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR TCA 72 bp TGTAAGTTTGACATCAGGTGTAGATTCGCTTTTCTCTaGCTGTGGCACACTGGTTATAGCATATTTCTTTGG +
Preference number: 3 (lower is better)
Translates to: CKFDIRCRFAFL*LWHTGYSIFLW
Trigger: CCAAAGAAATATGCTATAACCAGTGTGCCACAGTCAGAGAAAAGCGAATCTACACCTGATGTCAAACTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR CAA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCTACAACTCAACTGAGTaGAAAAGACAAATGTCTGAG +
Preference number: 3 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPYNSTE*KRQMSE
Trigger: CTCAGACATTTGTCTTTTCAACTCAGTTGAGTTGTA...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450251.5
3UTR-3UTR CAA 90 bp GGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCTTTGTCCCTTCTTATGTATCACTAGGTTaGGTCAGTAGGTTCCTATTA +
Preference number: 3 (lower is better)
Translates to: GLHQPNLYVVLNLFFVPSYVSLG*VSRFLL
Trigger: TAATAGGAACCTACTGACCAAACCTAGTGATACATA...AGAAGGGACAAAGAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR CAA 90 bp TGGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTTGGCATCGAATGCATTaGGAGACAACATCTTTCCAT +
Preference number: 3 (lower is better)
Translates to: WKCERSSSTKSLCRPKSFWHRMH*ETTSFH
Trigger: ATGGAAAGATGTTGTCTCCAAATGCATTCGATGCCA...AAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR CAA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGATACTCACTTCTAAACTaGGTTCTGAAGCTGTACTTA +
Preference number: 3 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGYSLLN*VLKLYL
Trigger: TAAGTACAGCTTCAGAACCAAGTTTAGAAGTGAGTA...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR TCA 72 bp GATATCCATTACTGTACCATTTCCATCGATAACAGGTaGGTCCAAATTAGTAGAACCATTACTGATGTGATC +
Preference number: 3 (lower is better)
Translates to: DIHYCTISIDNR*VQISRTITDVI
Trigger: GATCACATCAGTAATGGTTCTACTAATTTGGACTCACCTGTTATCGATGGAAATGGTACAGTAATGGATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR-3UTR CAA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGTATGTATCACTAGGTTaGGTCAGTAGGTTCCTATTA +
Preference number: 3 (lower is better)
Translates to: TIYAISQVATFTSLLNMRYVSLG*VSRFLL
Trigger: TAATAGGAACCTACTGACCAAACCTAGTGATACATA...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
3UTR GCA 72 bp CCATTAGATTCAAGGGAACTTCTGCTTCCTATTTCCTaGTTCATTTCATCTTCATATATGGTCATTAAACCT +
Preference number: 3 (lower is better)
Translates to: PLDSRELLLPIS*FISSSYMVIKP
Trigger: AGGTTTAATGACCATATATGAAGATGAAATGAAGCAGGAAATAGGAAGCAGAAGTTCCCTTGAATCTAATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR CCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGATGGAGCACAGGCGGCTaGTCTCCGCCGCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGWSTGG*SPPPRA
Trigger: GGCTCTGGGCGGCGGAGACCAGCCGCCTGTGCTCCA...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274030.10
CDS-3UTR TCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCCAGAGCCCGACCCTGTaGGCGGAGCATGCGCATACG +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPQSPTL*AEHAHT
Trigger: CGTATGCGCATGCTCCGCTCACAGGGTCGGGCTCTG...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274030.10
CDS-3UTR GCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAGAGCTCTACCCTCCTTaGGCGAGGAGCGTGCGGTCC +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGELYPP*ARSVRS
Trigger: GGACCGCACGCTCCTCGCGCAAGGAGGGTAGAGCTC...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274030.10
CDS-3UTR CCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCAGGCTCACCGGGAACTaGAGCACAGGCGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPRLTGN*STGGWS
Trigger: AGACCAGCCGCCTGTGCTCCAGTTCCCGGTGAGCCT...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274030.10
CDS-3UTR TCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCACCCGCCAGACACACTaGCTGCTGCCACAGTACCGA +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPTRQTH*LLPQYR
Trigger: TCGGTACTGTGGCAGCAGTCAGTGTGTCTGGCGGGT...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274030.10
3UTR CAA 72 bp GCTGCTATCACAGCTGTTTCCTCTATCCCTAGAATCTaGGCTGCTGTCTGTGTCATATCCAGTGCCATTGTC +
Preference number: 4 (lower is better)
Translates to: AAITAVSSIPRI*AAVCVISSAIV
Trigger: GACAATGGCACTGGATATGACACAGACAGCAGCCAAGATTCTAGGGATAGAGGAAACAGCTGTGATAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR TCA 90 bp GACTGTGGCACACTGGTTATAGCATATTTCTTTGGTGGCAAAGGGGGTGGTAGACTGTGCTTCGGAAGATaGGAGGTAGCTTTAAACACC +
Preference number: 4 (lower is better)
Translates to: DCGTLVIAYFFGGKGGGRLCFGR*EVALNT
Trigger: GGTGTTTAAAGCTACCTCTCATCTTCCGAAGCACAG...TCTACCACCCCCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR GCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCAGACACACTGACTGCTaGCACAGTACCGAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPRHTDC*HSTEAH
Trigger: GTGAGCCTCGGTACTGTGGCAGCAGTCAGTGTGTCT...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274030.10
CDS-3UTR GCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAGCCAGACACACTGACTaGTGCCACAGTACCGAGGCT +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGARHTD*CHSTEA
Trigger: AGCCTCGGTACTGTGGCAGCAGTCAGTGTGTCTGGC...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274030.10
CDS-3UTR CCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGACACTGCACTCCAGCCTaGGTGGCAGCAAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGHCTPA*VAARCC
Trigger: ACAGCATCTTGCTGCCACCCAGGCTGGAGTGCAGTG...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274030.10
CDS-3UTR GCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAACCTGTGAGCGGAGCATaGGCATACGCCCCAATACCC +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKPVSGA*AYAPIP
Trigger: GGGTATTGGGGCGTATGCGCATGCTCCGCTCACAGG...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000274030.10
CDS-3UTR GCA 90 bp GACTGTGGCACACTGGTTATAGCATATTTCTTTGGTGGCAAAGGGGGTGGTAGACTTTCTGCAAGAGCATaGCTTATGTTATCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: DCGTLVIAYFFGGKGGGRLSARA*LMLSEG
Trigger: TCCCTCAGATAACATAAGGCATGCTCTTGCAGAAAG...TCTACCACCCCCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR GCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCGACCAGCTGATGACCTaGCTGAGTGCATCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPDQLMT*LSASSV
Trigger: TACTGAGGATGCACTCAGGCAGGTCATCAGCTGGTC...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAGACCAGCTGATGACCTaGCTGAGTGCATCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGDQLMT*LSASSV
Trigger: TACTGAGGATGCACTCAGGCAGGTCATCAGCTGGTC...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp TGGATGAGAGGAGCAGTTTCTGGCTTTAACCCAACAGTTCTTAGGTGTGAAGACTCAGTCCTTTGCATCTaGCAATTATCACCATGCACT +
Preference number: 4 (lower is better)
Translates to: WMRGAVSGFNPTVLRCEDSVLCI*QLSPCT
Trigger: AGTGCATGGTGATAATTGGCAGATGCAAAGGACTGA...GTCTTCACACCTAAGAACTGTTGGGTTAAAGCCAGAAACTGCTCCTCTCATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR GCA 90 bp GACTGTGGCACACTGGTTATAGCATATTTCTTTGGTGGCAAAGGGGGTGGTAGATTCCCAATAAGAGGGTaGCCTACATTAATTCCTAAC +
Preference number: 4 (lower is better)
Translates to: DCGTLVIAYFFGGKGGGRFPIRG*PTLIPN
Trigger: GTTAGGAATTAATGTAGGGCACCCTCTTATTGGGAA...TCTACCACCCCCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR CCA 90 bp TGGATGAGAGGAGCAGTTTCTGGCTTTAACCCAACAGTTCTTAGGTGTGAAGACCCCATTTGGAACTTTTaGTGTGAAATGCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: WMRGAVSGFNPTVLRCEDPIWNF*CEMQRH
Trigger: GTGCCTTTGCATTTCACACCAAAAGTTCCAAATGGG...GTCTTCACACCTAAGAACTGTTGGGTTAAAGCCAGAAACTGCTCCTCTCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR TCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGATTCCCTACACCTGTGTaGCTGTGGCTCCGATTAGAT +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGFPTPV*LWLRLD
Trigger: ATCTAATCGGAGCCACAGTCACACAGGTGTAGGGAA...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp GGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCTTTGTCCCTTCTTTCCCTACACCTGTGTaGCTGTGGCTCCGATTAGAT +
Preference number: 4 (lower is better)
Translates to: GLHQPNLYVVLNLFFVPSFPTPV*LWLRLD
Trigger: ATCTAATCGGAGCCACAGTCACACAGGTGTAGGGAA...AGAAGGGACAAAGAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507906.5
ENST00000509769.5
CDS-3UTR GCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCTCGGTCAAGTCAGAATaGTCGGAGTCCCAGACTAAA +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPSVKSE*SESQTK
Trigger: TTTAGTCTGGGACTCCGAGCATTCTGACTTGACCGA...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAGACCAGCTGATGACCTaGCTGAGTGCATCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRDQLMT*LSASSV
Trigger: TACTGAGGATGCACTCAGGCAGGTCATCAGCTGGTC...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp TGGATGAGAGGAGCAGTTTCTGGCTTTAACCCAACAGTTCTTAGGTGTGAAGACGTGGATATGTTCTCTTaGATTATGGTCCTTGGGTAT +
Preference number: 4 (lower is better)
Translates to: WMRGAVSGFNPTVLRCEDVDMFS*IMVLGY
Trigger: ATACCCAAGGACCATAATGCAAGAGAACATATCCAC...GTCTTCACACCTAAGAACTGTTGGGTTAAAGCCAGAAACTGCTCCTCTCATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR GCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCGACACCCATCAGATCTaGTGGCTGACCGAATTATAC +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPDTHQI*WLTELY
Trigger: GTATAATTCGGTCAGCCAGCAGATCTGATGGGTGTC...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp GACTGTGGCACACTGGTTATAGCATATTTCTTTGGTGGCAAAGGGGGTGGTAGACTTTGGATTCTCTTTTaGCCAATTACTAAAACTCGG +
Preference number: 4 (lower is better)
Translates to: DCGTLVIAYFFGGKGGGRLWILF*PITKTR
Trigger: CCGAGTTTTAGTAATTGGCCAAAAGAGAATCCAAAG...TCTACCACCCCCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR TCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAGCAGAAGCTCGACTCTaGGGTACAACTCGGTCATGT +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKAEARL*GTTRSC
Trigger: ACATGACCGAGTTGTACCTCAGAGTCGAGCTTCTGC...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGGCAGAAGCTCGACTCTaGGGTACAACTCGGTCATGT +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRAEARL*GTTRSC
Trigger: ACATGACCGAGTTGTACCTCAGAGTCGAGCTTCTGC...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR TCA 90 bp TGGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTGCAGAAGCTCGACTCTaGGGTACAACTCGGTCATGT +
Preference number: 4 (lower is better)
Translates to: WKCERSSSTKSLCRPKSFAEARL*GTTRSC
Trigger: ACATGACCGAGTTGTACCTCAGAGTCGAGCTTCTGC...AAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR TCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCAGATTCGCTTTTCTCTaGCTGTGGCACACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPRFAFL*LWHTGY
Trigger: ATAACCAGTGTGCCACAGTCAGAGAAAAGCGAATCT...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp TGGATGAGAGGAGCAGTTTCTGGCTTTAACCCAACAGTTCTTAGGTGTGAAGACTCAAAGCACTCTTCATaGAAAGTAGTTGGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: WMRGAVSGFNPTVLRCEDSKHSS*KVVGVK
Trigger: TTTTACCCCAACTACTTTTCATGAAGAGTGCTTTGA...GTCTTCACACCTAAGAACTGTTGGGTTAAAGCCAGAAACTGCTCCTCTCATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR GCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAAGGACGAAGGGTCTTTaGTTAGACCATCATCACGGA +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGRTKGL*LDHHHG
Trigger: TCCGTGATGATGGTCTAAGCAAAGACCCTTCGTCCT...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274030.10
CDS-3UTR GCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGATCGGTCAAGTCAGAATaGTCGGAGTCCCAGACTAAA +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGSVKSE*SESQTK
Trigger: TTTAGTCTGGGACTCCGAGCATTCTGACTTGACCGA...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp GGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCTTTGTCCCTTCTATCCTCAGTAGAAACTaGTGTGCCATCTGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GLHQPNLYVVLNLFFVPSILSRN*CAIWVC
Trigger: GCAAACCCAGATGGCACAGCAGTTTCTACTGAGGAT...AGAAGGGACAAAGAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507906.5
ENST00000509769.5
CDS-3UTR GCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAGATGACCTGCCTGAGTaGATCCTCAGTAGAAACTGC +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRDDLPE*ILSRNC
Trigger: GCAGTTTCTACTGAGGATGCACTCAGGCAGGTCATC...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAGACACCCATCAGATCTaGTGGCTGACCGAATTATAC +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGDTHQI*WLTELY
Trigger: GTATAATTCGGTCAGCCAGCAGATCTGATGGGTGTC...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCGCTGGATGGACAGTTTaGTGTGTTGCCAAAACATTC +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPAGWTV*CVAKTF
Trigger: GAATGTTTTGGCAACACACCAAACTGTCCATCCAGC...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCGGCAAAATGCATCAATaGCACCTGAGTTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPGKMHQ*HLSLPE
Trigger: TTCAGGCAAACTCAGGTGCCATTGATGCATTTTGCC...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCCTGGAAAAGAGAGCTTaGGCCTCTGATGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPLEKRA*ASDGIS
Trigger: TGAAATACCATCAGAGGCCCAAGCTCTCTTTTCCAG...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp GACTGTGGCACACTGGTTATAGCATATTTCTTTGGTGGCAAAGGGGGTGGTAGAAGGCTATGTATCACCTaGTACTTTTCAATTAGCATA +
Preference number: 4 (lower is better)
Translates to: DCGTLVIAYFFGGKGGGRRLCIT*YFSISI
Trigger: TATGCTAATTGAAAAGTACCAGGTGATACATAGCCT...TCTACCACCCCCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR TCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCATCGCTGCTCATCTTTaGAACTTTCTGCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPIAAHL*NFLQEH
Trigger: ATGCTCTTGCAGAAAGTTTCAAAGATGAGCAGCGAT...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGATCCATAAGGCCAAGTTaGAATCGCTGCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGSIRPS*NRCSSL
Trigger: CAAAGATGAGCAGCGATTTCAACTTGGCCTTATGGA...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCAACAAAAGTAGTGGCTaGAAGTGGCATCGAATGCAT +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPNKSSG*KWHRMH
Trigger: ATGCATTCGATGCCACTTTCAGCCACTACTTTTGTT...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp TGGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTTTCCCTACACCTGTGTaGCTGTGGCTCCGATTAGAT +
Preference number: 4 (lower is better)
Translates to: WKCERSSSTKSLCRPKSFFPTPV*LWLRLD
Trigger: ATCTAATCGGAGCCACAGTCACACAGGTGTAGGGAA...AAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCCA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000507906.5
ENST00000509769.5
CDS-3UTR TCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGATATTTTGTTGCTGGATaGGAGGAGCAGTTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGYFVAG*EEQFLA
Trigger: AGCCAGAAACTGCTCCTCTCATCCAGCAACAAAATA...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAAGATTCGCTTTTCTCTaGCTGTGGCACACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGRFAFL*LWHTGY
Trigger: ATAACCAGTGTGCCACAGTCAGAGAAAAGCGAATCT...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGACTGTGCTTCGGAAGATaGGAGGTAGCTTTAAACACC +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRLCFGR*EVALNT
Trigger: GGTGTTTAAAGCTACCTCTCATCTTCCGAAGCACAG...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCTTGTGTAGTAGTACATaGGTCAGGAGGTTTCAACTG +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPLCSST*VRRFQL
Trigger: CAGTTGAAACCTCCTGACTCATGTACTACTACACAA...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450251.5
CDS-3UTR GCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCCTTTCTGCAAGAGCATaGCTTATGTTATCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPLSARA*LMLSEG
Trigger: TCCCTCAGATAACATAAGGCATGCTCTTGCAGAAAG...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAATCCTCAGTAGAAACTaGTGTGCCATCTGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRILSRN*CAIWVC
Trigger: GCAAACCCAGATGGCACAGCAGTTTCTACTGAGGAT...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAGATGACCTGCCTGAGTaGATCCTCAGTAGAAACTGC +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKDDLPE*ILSRNC
Trigger: GCAGTTTCTACTGAGGATGCACTCAGGCAGGTCATC...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCTGCCAATTATCACCATaGACTTTACCCTCTACAAGG +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPCQLSP*TLPSTR
Trigger: CCTTGTAGAGGGTAAAGTGCATGGTGATAATTGGCA...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCCCCATTTGGAACTTTTaGTGTGAAATGCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPPIWNF*CEMQRH
Trigger: GTGCCTTTGCATTTCACACCAAAAGTTCCAAATGGG...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCACCCATCAGATCTGCTaGCTGACCGAATTATACATT +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPTHQIC*LTELYI
Trigger: AATGTATAATTCGGTCAGCCAGCAGATCTGATGGGT...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAGGCAAAATGCATCAATaGCACCTGAGTTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGGKMHQ*HLSLPE
Trigger: TTCAGGCAAACTCAGGTGCCATTGATGCATTTTGCC...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCTCAGGAGGTTTCAACTaGACAGTACTTAAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPSGGFN*TVLKRG
Trigger: GCCTCTTTTAAGTACTGTCCAGTTGAAACCTCCTGA...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450251.5
CDS-3UTR TCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCAGTTGGCATTTGGCATaGTTCCTTTGGTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPSWHLA*FLWLFV
Trigger: AACAAACAACCAAAGGAATCATGCCAAATGCCAACT...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR TCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAATACAGGCATCTCCCTaGCAAACATGTCCAGTCAAA +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRIQASP*QTCPVK
Trigger: TTTGACTGGACATGTTTGTCAGGGAGATGCCTGTAT...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp GGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCTTTGTCCCTTCTATGCCTTATGTTATCTaGGGGAAGTGCTTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: GLHQPNLYVVLNLFFVPSMPYVI*GKCFFS
Trigger: CGAGAAAAAGCACTTCCCTCAGATAACATAAGGCAT...AGAAGGGACAAAGAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR TCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGATCCATAAGGCCAAGTTaGAATCGCTGCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRSIRPS*NRCSSL
Trigger: CAAAGATGAGCAGCGATTTCAACTTGGCCTTATGGA...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAAACAAAAGTAGTGGCTaGAAGTGGCATCGAATGCAT +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGNKSSG*KWHRMH
Trigger: ATGCATTCGATGCCACTTTCAGCCACTACTTTTGTT...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp GGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCTTTGTCCCTTCTAACAAAAGTAGTGGCTaGAAGTGGCATCGAATGCAT +
Preference number: 4 (lower is better)
Translates to: GLHQPNLYVVLNLFFVPSNKSSG*KWHRMH
Trigger: ATGCATTCGATGCCACTTTCAGCCACTACTTTTGTT...AGAAGGGACAAAGAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507906.5
ENST00000509769.5
CDS-3UTR TCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAAACAGATTTGTAATGTaGCCAGCTGATGACCTGCCT +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRNRFVM*PADDLP
Trigger: AGGCAGGTCATCAGCTGGTCACATTACAAATCTGTT...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCTCCAGATTGGAAATGTaGAAGGTCTTCATCAACCAA +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPSRLEM*KVFINQ
Trigger: TTGGTTGATGAAGACCTTTCACATTTCCAATCTGGA...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp GGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCTTTGTCCCTTCTTCCATCGATAACAGGTaGGTCCAAATTAGTAGAACC +
Preference number: 4 (lower is better)
Translates to: GLHQPNLYVVLNLFFVPSSIDNR*VQISRT
Trigger: GGTTCTACTAATTTGGACTCACCTGTTATCGATGGA...AGAAGGGACAAAGAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR TCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATCAGATCTGCTGGCTaGCCGAATTATACATTCTGT +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGIRSAG*PNYTFC
Trigger: ACAGAATGTATAATTCGGTCAGCCAGCAGATCTGAT...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAAAAAGTTTTGGCATCTaGCACCCATCAGATCTGCTG +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRKSFGI*HPSDLL
Trigger: CAGCAGATCTGATGGGTGTCAGATGCCAAAACTTTT...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp GGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCCTGAAAATCGTTAGTTaGGGAGCTGGATGGACAGTT +
Preference number: 4 (lower is better)
Translates to: GNVKGLHQPNLYVVLNLFLKIVS*GAGWTV
Trigger: AACTGTCCATCCAGCTCCTCAACTAACGATTTTCAG...GAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR GCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCACTGTGTTGGAACTGTaGAAATATCGTCTTCAATGC +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPTVLEL*KYRLQC
Trigger: GCATTGAAGACGATATTTGCACAGTTCCAACACAGT...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGACTTTCTGCAAGAGCATaGCTTATGTTATCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGLSARA*LMLSEG
Trigger: TCCCTCAGATAACATAAGGCATGCTCTTGCAGAAAG...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAAGAGGTACACATGTCTaGATCTCTGCTTGGCACTAT +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRRGTHV*ISAWHY
Trigger: ATAGTGCCAAGCAGAGATGCAGACATGTGTACCTCT...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGATCCTCAGTAGAAACTaGTGTGCCATCTGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRILSRN*CAIWVC
Trigger: GCAAACCCAGATGGCACAGCAGTTTCTACTGAGGAT...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR GCA 90 bp TGGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTATCCTCAGTAGAAACTaGTGTGCCATCTGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: WKCERSSSTKSLCRPKSFILSRN*CAIWVC
Trigger: GCAAACCCAGATGGCACAGCAGTTTCTACTGAGGAT...AAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507906.5
ENST00000509769.5
CDS-3UTR GCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGATGCCAATTATCACCATaGACTTTACCCTCTACAAGG +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGCQLSP*TLPSTR
Trigger: CCTTGTAGAGGGTAAAGTGCATGGTGATAATTGGCA...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCGTGGATATGTTCTCTTaGATTATGGTCCTTGGGTAT +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPVDMFS*IMVLGY
Trigger: ATACCCAAGGACCATAATGCAAGAGAACATATCCAC...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCTTTTCTCGACTGTGTTaGAACTGTGCAAATATCGTC +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPFSRLC*NCANIV
Trigger: GACGATATTTGCACAGTTCCAACACAGTCGAGAAAA...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCCACAATAATGTTGGCTaGTGTAGCAGATCATACCAA +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPHNNVG*CSRSYQ
Trigger: TTGGTATGATCTGCTACACCAGCCAACATTATTGTG...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGACTATCCCTAGAATCTTaGCTGCTGTCTGTGTCATAT +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGLSLES*LLSVSY
Trigger: ATATGACACAGACAGCAGCCAAGATTCTAGGGATAG...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp GGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCTTTGTCCCTTCTACCCATCAGATCTGCTaGCTGACCGAATTATACATT +
Preference number: 4 (lower is better)
Translates to: GLHQPNLYVVLNLFFVPSTHQIC*LTELYI
Trigger: AATGTATAATTCGGTCAGCCAGCAGATCTGATGGGT...AGAAGGGACAAAGAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR CCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAGCTGGATGGACAGTTTaGTGTGTTGCCAAAACATTC +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRAGWTV*CVAKTF
Trigger: GAATGTTTTGGCAACACACCAAACTGTCCATCCAGC...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAGAGTCTAGTTCTGGTTaGCAAAATGCATCAATGGCA +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGESSSG*QNASMA
Trigger: TGCCATTGATGCATTTTGCCAACCAGAACTAGACTC...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCGCAGAAGATAAAATTTaGCCAAGACTTGGTAACTGG +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPAEDKI*PRLGNW
Trigger: CCAGTTACCAAGTCTTGGCCAAATTTTATCTTCTGC...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450251.5
CDS-3UTR TCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAAGTTGGCATTTGGCATaGTTCCTTTGGTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGSWHLA*FLWLFV
Trigger: AACAAACAACCAAAGGAATCATGCCAAATGCCAACT...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR TCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAATGCCTTATGTTATCTaGGGGAAGTGCTTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRMPYVI*GKCFFS
Trigger: CGAGAAAAAGCACTTCCCTCAGATAACATAAGGCAT...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAATCGCTGCTCATCTTTaGAACTTTCTGCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRIAAHL*NFLQEH
Trigger: ATGCTCTTGCAGAAAGTTTCAAAGATGAGCAGCGAT...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAAACAGATTTGTAATGTaGCCAGCTGATGACCTGCCT +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKNRFVM*PADDLP
Trigger: AGGCAGGTCATCAGCTGGTCACATTACAAATCTGTT...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp GGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCTTTGTCCCTTCTTCAGTTGGAAATTTCTaGTTTTCTCTCTGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GLHQPNLYVVLNLFFVPSSVGNF*FSLCFA
Trigger: GGCAAAGCAGAGAGAAAATCAGAAATTTCCAACTGA...AGAAGGGACAAAGAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507906.5
ENST00000509769.5
CDS-3UTR TCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGTATTTTGTTGCTGGATaGGAGGAGCAGTTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRYFVAG*EEQFLA
Trigger: AGCCAGAAACTGCTCCTCTCATCCAGCAACAAAATA...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR TCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAATCAGATCTGCTGGCTaGCCGAATTATACATTCTGT +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRIRSAG*PNYTFC
Trigger: ACAGAATGTATAATTCGGTCAGCCAGCAGATCTGAT...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAAAAAGTTTTGGCATCTaGCACCCATCAGATCTGCTG +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKKSFGI*HPSDLL
Trigger: CAGCAGATCTGATGGGTGTCAGATGCCAAAACTTTT...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
39% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGAAAAGTTTTGGCATCTaGCACCCATCAGATCTGCTG +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRKSFGI*HPSDLL
Trigger: CAGCAGATCTGATGGGTGTCAGATGCCAAAACTTTT...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR TCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGCTGAAAATCGTTAGTTaGGGAGCTGGATGGACAGTT +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRLKIVS*GAGWTV
Trigger: AACTGTCCATCCAGCTCCTCAACTAACGATTTTCAG...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR TCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAACTGAAAATCGTTAGTTaGGGAGCTGGATGGACAGTT +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKLKIVS*GAGWTV
Trigger: AACTGTCCATCCAGCTCCTCAACTAACGATTTTCAG...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAATGCATCAATGGCACCTaGGTTTGCCTGAAAATCGTT +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKCINGT*VCLKIV
Trigger: AACGATTTTCAGGCAAACTCAGGTGCCATTGATGCA...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGATCAAAAACAAATGGGTaGAGCCCTTTTCTGGTTACC +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRSKTNG*SPFLVT
Trigger: GGTAACCAGAAAAGGGCTTCACCCATTTGTTTTTGA...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGTGGGTGGCAGCAAGATaGTGTCTCTTGTTCTACTTT +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRWVAAR*CLLFYF
Trigger: AAAGTAGAACAAGAGACAGCATCTTGCTGCCACCCA...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274030.10
CDS-3UTR GCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGACGGAATATATCCAATTaGCATAAAACCTGTACAGCG +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGRNISN*HKTCTA
Trigger: CGCTGTACAGGTTTTATGGCAATTGGATATATTCCG...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAACATGTCTGCATCTCTaGTTGGCACTATGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGTCLHL*LALCEN
Trigger: ATTTTCACATAGTGCCAAGCAGAGATGCAGACATGT...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAAGAGGTACACATGTCTaGATCTCTGCTTGGCACTAT +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKRGTHV*ISAWHY
Trigger: ATAGTGCCAAGCAGAGATGCAGACATGTGTACCTCT...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGAGAGGTACACATGTCTaGATCTCTGCTTGGCACTAT +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRRGTHV*ISAWHY
Trigger: ATAGTGCCAAGCAGAGATGCAGACATGTGTACCTCT...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR GCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGATCAGTCCTTTGCATCTaGCAATTATCACCATGCACT +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRSVLCI*QLSPCT
Trigger: AGTGCATGGTGATAATTGGCAGATGCAAAGGACTGA...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGATCCATGATATTTTGTTaGTGGATGAGAGGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGSMIFC*WMRGAV
Trigger: AACTGCTCCTCTCATCCAGCAACAAAATATCATGGA...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGACACAATAATGTTGGCTaGTGTAGCAGATCATACCAA +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGHNNVG*CSRSYQ
Trigger: TTGGTATGATCTGCTACACCAGCCAACATTATTGTG...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAAACTGCTGTGCCATCTaGGTTTGCATAAAACAAAAG +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGNCCAI*VCIKQK
Trigger: CTTTTGTTTTATGCAAACCCAGATGGCACAGCAGTT...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCCCTGGAGCAAGAATCTaGGATTTACTTGAACTTATT +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPPGARI*DLLELI
Trigger: AATAAGTTCAAGTAAATCCCAGATTCTTGCTCCAGG...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp GGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCCTATCCCTAGAATCTTaGCTGCTGTCTGTGTCATAT +
Preference number: 4 (lower is better)
Translates to: GNVKGLHQPNLYVVLNLFLSLES*LLSVSY
Trigger: ATATGACACAGACAGCAGCCAAGATTCTAGGGATAG...GAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR CCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCATGATATTTTGTTGCTaGATGAGAGGAGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPMIFCC*MRGAVS
Trigger: AGAAACTGCTCCTCTCATCCAGCAACAAAATATCAT...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGGCTGGATGGACAGTTTaGTGTGTTGCCAAAACATTC +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRAGWTV*CVAKTF
Trigger: GAATGTTTTGGCAACACACCAAACTGTCCATCCAGC...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAGGCAAAATGCATCAATaGCACCTGAGTTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKGKMHQ*HLSLPE
Trigger: TTCAGGCAAACTCAGGTGCCATTGATGCATTTTGCC...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp GGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCGAGTCTAGTTCTGGTTaGCAAAATGCATCAATGGCA +
Preference number: 4 (lower is better)
Translates to: GNVKGLHQPNLYVVLNLFESSSG*QNASMA
Trigger: TGCCATTGATGCATTTTGCCAACCAGAACTAGACTC...GAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR CCA 90 bp TGGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCTGGAAAAGAGAGCTTaGGCCTCTGATGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: WKCERSSSTKSLCRPKSFLEKRA*ASDGIS
Trigger: TGAAATACCATCAGAGGCCCAAGCTCTCTTTTCCAG...AAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509769.5
3UTR CAA 72 bp TCTGACTGGTGGATATGTTCTCTTGCATTATGGTCCTaGGGTATTTGTAGACTGGATGAAGGAAATAACTTT +
Preference number: 4 (lower is better)
Translates to: SDWWICSLALWS*GICRLDEGNNF
Trigger: AAAGTTATTTCCTTCATCCAGTCTACAAATACCCAAGGACCATAATGCAAGAGAACATATCCACCAGTCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR TCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGATGCCTTATGTTATCTaGGGGAAGTGCTTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRMPYVI*GKCFFS
Trigger: CGAGAAAAAGCACTTCCCTCAGATAACATAAGGCAT...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR TCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGATCAGTTGGAAATTTCTaGTTTTCTCTCTGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRSVGNF*FSLCFA
Trigger: GGCAAAGCAGAGAGAAAATCAGAAATTTCCAACTGA...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGATCCAGATTGGAAATGTaGAAGGTCTTCATCAACCAA +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRSRLEM*KVFINQ
Trigger: TTGGTTGATGAAGACCTTTCACATTTCCAATCTGGA...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAATCCATCGATAACAGGTaGGTCCAAATTAGTAGAACC +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKSIDNR*VQISRT
Trigger: GGTTCTACTAATTTGGACTCACCTGTTATCGATGGA...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGTCCATCGATAACAGGTaGGTCCAAATTAGTAGAACC +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRSIDNR*VQISRT
Trigger: GGTTCTACTAATTTGGACTCACCTGTTATCGATGGA...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR TCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAATCAGATCTGCTGGCTaGCCGAATTATACATTCTGT +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKIRSAG*PNYTFC
Trigger: ACAGAATGTATAATTCGGTCAGCCAGCAGATCTGAT...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGGAGAGCTTGGGCCTCTaGTGGTATTTCAATCTATAT +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRESLGL*WYFNLY
Trigger: ATATAGATTGAAATACCATCAGAGGCCCAAGCTCTC...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR TCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAGAGAGCTTGGGCCTCTaGTGGTATTTCAATCTATAT +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKESLGL*WYFNLY
Trigger: ATATAGATTGAAATACCATCAGAGGCCCAAGCTCTC...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp TGGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTGAGAGCTTGGGCCTCTaGTGGTATTTCAATCTATAT +
Preference number: 4 (lower is better)
Translates to: WKCERSSSTKSLCRPKSFESLGL*WYFNLY
Trigger: ATATAGATTGAAATACCATCAGAGGCCCAAGCTCTC...AAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR TCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAATCAAAAACAAATGGGTaGAGCCCTTTTCTGGTTACC +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKSKTNG*SPFLVT
Trigger: GGTAACCAGAAAAGGGCTTCACCCATTTGTTTTTGA...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGATCAAAGCACTCTTCATaGAAAGTAGTTGGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGSKHSS*KVVGVK
Trigger: TTTTACCCCAACTACTTTTCATGAAGAGTGCTTTGA...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCACTTTTGGTGTGAAATaGAAAGGCACAATAATGTTG +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPTFGVK*KGTIML
Trigger: CAACATTATTGTGCCTTTGCATTTCACACCAAAAGT...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCCTGCTTCCTATTTCCTaGTTCATTTCATCTTCATAT +
Preference number: 4 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPLLPIS*FISSSY
Trigger: ATATGAAGATGAAATGAAGCAGGAAATAGGAAGCAG...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAATGCCAATTATCACCATaGACTTTACCCTCTACAAGG +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKCQLSP*TLPSTR
Trigger: CCTTGTAGAGGGTAAAGTGCATGGTGATAATTGGCA...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGATTCCCAATAAGAGGGTaGCCTACATTAATTCCTAAC +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRFPIRG*PTLIPN
Trigger: GTTAGGAATTAATGTAGGGCACCCTCTTATTGGGAA...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp TGGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTTTTTCACATCCTGAGTaGATCCTCAGTAGAAACTGC +
Preference number: 4 (lower is better)
Translates to: WKCERSSSTKSLCRPKSFFSHPE*ILSRNC
Trigger: GCAGTTTCTACTGAGGATGCACTCAGGATGTGAAAA...AAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCCA
38% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507906.5
CDS-3UTR CCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGATGTAGAGTTGGCATTTaGCATGATTCCTTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRCRVGI*HDSFGC
Trigger: ACAACCAAAGGAATCATGCCAAATGCCAACTCTACA...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGCCCATTTGGAACTTTTaGTGTGAAATGCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRPIWNF*CEMQRH
Trigger: GTGCCTTTGCATTTCACACCAAAAGTTCCAAATGGG...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CCA 90 bp TGGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCCCATTTGGAACTTTTaGTGTGAAATGCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: WKCERSSSTKSLCRPKSFPIWNF*CEMQRH
Trigger: GTGCCTTTGCATTTCACACCAAAAGTTCCAAATGGG...AAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507906.5
ENST00000509769.5
CDS-3UTR CCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAACTATCCCTAGAATCTTaGCTGCTGTCTGTGTCATAT +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKLSLES*LLSVSY
Trigger: ATATGACACAGACAGCAGCCAAGATTCTAGGGATAG...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGATGTTCTCTTGCATTATaGTCCTTGGGTATTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGCSLAL*SLGICR
Trigger: TCTACAAATACCCAAGGACCATAATGCAAGAGAACA...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGATGTTCATCTGACTGGTaGATATGTTCTCTTGCATTA +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGCSSDW*ICSLAL
Trigger: TAATGCAAGAGAACATATCCACCAGTCAGATGAACA...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGATTCTGTTCATCTGACTaGTGGATATGTTCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRFCSSD*WICSLA
Trigger: TGCAAGAGAACATATCCACCAGTCAGATGAACAGAA...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGACCCATCAGATCTGCTaGCTGACCGAATTATACATT +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRTHQIC*LTELYI
Trigger: AATGTATAATTCGGTCAGCCAGCAGATCTGATGGGT...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAGAGTCTAGTTCTGGTTaGCAAAATGCATCAATGGCA +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKESSSG*QNASMA
Trigger: TGCCATTGATGCATTTTGCCAACCAGAACTAGACTC...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
3UTR CAA 72 bp GTCTTTCATCATTCATATGTGTACTCACTTCTAAACTaGGTTCTGAAGCTGTACTTAAACTGTGCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: VFHHSYVYSLLN*VLKLYLNCASE
Trigger: TTCCGAAGCACAGTTTAAGTACAGCTTCAGAACCAAGTTTAGAAGTGAGTACACATATGAATGATGAAAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR TCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAATAGCAAACTTCTGGTaGGTGATACAAGATTTAGAG +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRIANFW*VIQDLE
Trigger: CTCTAAATCTTGTATCACTCACCAGAAGTTTGCTAT...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAATCAGTTGGAAATTTCTaGTTTTCTCTCTGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKSVGNF*FSLCFA
Trigger: GGCAAAGCAGAGAGAAAATCAGAAATTTCCAACTGA...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp TGGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTTCCAGATTGGAAATGTaGAAGGTCTTCATCAACCAA +
Preference number: 4 (lower is better)
Translates to: WKCERSSSTKSLCRPKSFSRLEM*KVFINQ
Trigger: TTGGTTGATGAAGACCTTTCACATTTCCAATCTGGA...AAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507906.5
ENST00000509769.5
CDS-3UTR TCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAATCCAGATTGGAAATGTaGAAGGTCTTCATCAACCAA +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKSRLEM*KVFINQ
Trigger: TTGGTTGATGAAGACCTTTCACATTTCCAATCTGGA...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAGAACCATTACTGATGTaGTCACTGCTTTCATATCCA +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKEPLLM*SLLSYP
Trigger: TGGATATGAAAGCAGTGATCACATCAGTAATGGTTC...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGGAACCATTACTGATGTaGTCACTGCTTTCATATCCA +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMREPLLM*SLLSYP
Trigger: TGGATATGAAAGCAGTGATCACATCAGTAATGGTTC...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR TCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAACAACTCAACTGAGTTaGAAAGACAAATGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRTTQLS*KDKCLR
Trigger: TCTCAGACATTTGTCTTTTCAACTCAGTTGAGTTGT...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450251.5
CDS-3UTR GCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGCGGAATATATCCAATTaGCATAAAACCTGTACAGCG +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRRNISN*HKTCTA
Trigger: CGCTGTACAGGTTTTATGGCAATTGGATATATTCCG...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR GCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAACGGAATATATCCAATTaGCATAAAACCTGTACAGCG +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKRNISN*HKTCTA
Trigger: CGCTGTACAGGTTTTATGGCAATTGGATATATTCCG...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGACTGTGTTGGAACTGTaGAAATATCGTCTTCAATGC +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRTVLEL*KYRLQC
Trigger: GCATTGAAGACGATATTTGCACAGTTCCAACACAGT...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR GCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAACTGTGTTGGAACTGTaGAAATATCGTCTTCAATGC +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKTVLEL*KYRLQC
Trigger: GCATTGAAGACGATATTTGCACAGTTCCAACACAGT...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAACATGTCTGCATCTCTaGTTGGCACTATGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKTCLHL*LALCEN
Trigger: ATTTTCACATAGTGCCAAGCAGAGATGCAGACATGT...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAGGTTTAAAGCGTTCATaGCTTTCCAACATTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRGLKRS*LSNILS
Trigger: TGAAAGAATGTTGGAAAGGCATGAACGCTTTAAACC...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp GGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCGGTTTAAAGCGTTCATaGCTTTCCAACATTCTTTCA +
Preference number: 4 (lower is better)
Translates to: GNVKGLHQPNLYVVLNLFGLKRS*LSNILS
Trigger: TGAAAGAATGTTGGAAAGGCATGAACGCTTTAAACC...GAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR GCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAACTTTTGGTGTGAAATaGAAAGGCACAATAATGTTG +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGTFGVK*KGTIML
Trigger: CAACATTATTGTGCCTTTGCATTTCACACCAAAAGT...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGACTGCTTCCTATTTCCTaGTTCATTTCATCTTCATAT +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGLLPIS*FISSSY
Trigger: ATATGAAGATGAAATGAAGCAGGAAATAGGAAGCAG...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGATTCAAGGGAACTTCTaGTTCCTATTTCCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRIQGNF*FLFPAS
Trigger: TGAAGCAGGAAATAGGAAGCAGAAGTTCCCTTGAAT...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR GCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAATGAGATTTATAGCCTaGTTCCAAATTCCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRMRFIA*FQIPEF
Trigger: GAACTCAGGAATTTGGAAGCAGGCTATAAATCTCAT...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAATCCATGATATTTTGTTaGTGGATGAGAGGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKSMIFC*WMRGAV
Trigger: AACTGCTCCTCTCATCCAGCAACAAAATATCATGGA...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp TGGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTTCCATGATATTTTGTTaGTGGATGAGAGGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: WKCERSSSTKSLCRPKSFSMIFC*WMRGAV
Trigger: AACTGCTCCTCTCATCCAGCAACAAAATATCATGGA...AAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR GCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGTTCCCAATAAGAGGGTaGCCTACATTAATTCCTAAC +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRFPIRG*PTLIPN
Trigger: GTTAGGAATTAATGTAGGGCACCCTCTTATTGGGAA...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGTGTAGAGTTGGCATTTaGCATGATTCCTTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRCRVGI*HDSFGC
Trigger: ACAACCAAAGGAATCATGCCAAATGCCAACTCTACA...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGTTTTCTCGACTGTGTTaGAACTGTGCAAATATCGTC +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRFSRLC*NCANIV
Trigger: GACGATATTTGCACAGTTCCAACACAGTCGAGAAAA...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CCA 90 bp TGGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTTTTTCTCGACTGTGTTaGAACTGTGCAAATATCGTC +
Preference number: 4 (lower is better)
Translates to: WKCERSSSTKSLCRPKSFFSRLC*NCANIV
Trigger: GACGATATTTGCACAGTTCCAACACAGTCGAGAAAA...AAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCCA
37% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR CCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAACACAATAATGTTGGCTaGTGTAGCAGATCATACCAA +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKHNNVG*CSRSYQ
Trigger: TTGGTATGATCTGCTACACCAGCCAACATTATTGTG...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAAACTGCTGTGCCATCTaGGTTTGCATAAAACAAAAG +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKNCCAI*VCIKQK
Trigger: CTTTTGTTTTATGCAAACCCAGATGGCACAGCAGTT...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp TGGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTAACTGCTGTGCCATCTaGGTTTGCATAAAACAAAAG +
Preference number: 4 (lower is better)
Translates to: WKCERSSSTKSLCRPKSFNCCAI*VCIKQK
Trigger: CTTTTGTTTTATGCAAACCCAGATGGCACAGCAGTT...AAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507906.5
ENST00000509769.5
CDS-3UTR CCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGACCTGGAGCAAGAATCTaGGATTTACTTGAACTTATT +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRPGARI*DLLELI
Trigger: AATAAGTTCAAGTAAATCCCAGATTCTTGCTCCAGG...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGTTGCTTGTCGTAATCTaGTCACTGAAGCATACTGTT +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRLLVVI*SLKHTV
Trigger: AACAGTATGCTTCAGTGACCAGATTACGACAAGCAA...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CCA 90 bp TGGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTTTCTGTTCATCTGACTaGTGGATATGTTCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: WKCERSSSTKSLCRPKSFFCSSD*WICSLA
Trigger: TGCAAGAGAACATATCCACCAGTCAGATGAACAGAA...AAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCCA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR CCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAATGATATTTTGTTGCTaGATGAGAGGAGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRMIFCC*MRGAVS
Trigger: AGAAACTGCTCCTCTCATCCAGCAACAAAATATCAT...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp GGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCTTTGTCCCTTCTCTGAGAAGTAAAAGTTaGTCAGTTTTACCAGTTATC +
Preference number: 4 (lower is better)
Translates to: GLHQPNLYVVLNLFFVPSLRSKS*SVLPVI
Trigger: GATAACTGGTAAAACTGACCAACTTTTACTTCTCAG...AGAAGGGACAAAGAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR CCA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAAGGCTATGTATCACCTaGTACTTTTCAATTAGCATA +
Preference number: 4 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGRLCIT*YFSISI
Trigger: TATGCTAATTGAAAAGTACCAGGTGATACATAGCCT...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAATAGCAAACTTCTGGTaGGTGATACAAGATTTAGAG +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKIANFW*VIQDLE
Trigger: CTCTAAATCTTGTATCACTCACCAGAAGTTTGCTAT...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAATCGGTCATGTTTATATaGTCCTTTTCCTTGACTATG +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKSVMFI*SFSLTM
Trigger: CATAGTCAAGGAAAAGGATCATATAAACATGACCGA...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR TCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGTCAAAGCACTCTTCATaGAAAGTAGTTGGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRSKHSS*KVVGVK
Trigger: TTTTACCCCAACTACTTTTCATGAAGAGTGCTTTGA...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR GCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAACTTTTGGTGTGAAATaGAAAGGCACAATAATGTTG +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRTFGVK*KGTIML
Trigger: CAACATTATTGTGCCTTTGCATTTCACACCAAAAGT...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp GGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCGTCATTAAACCTTTTTaGTTTGGATTCTCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: GNVKGLHQPNLYVVLNLFVIKPF*FGFSFG
Trigger: GCCAAAAGAGAATCCAAAGCAAAAAGGTTTAATGAC...GAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR GCA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGACTTAAAGGGATCATATaGAGTGACTATCATAGAAGT +
Preference number: 4 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRLKGII*SDYHRS
Trigger: ACTTCTATGATAGTCACTGCATATGATCCCTTTAAG...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGCCTGGAGCAAGAATCTaGGATTTACTTGAACTTATT +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRPGARI*DLLELI
Trigger: AATAAGTTCAAGTAAATCCCAGATTCTTGCTCCAGG...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAAGTTATTTTCTCTCCTaGAGCAAGAATCTGGGATTT +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKSYFLS*SKNLGF
Trigger: AAATCCCAGATTCTTGCTCCAGGAGAGAAAATAACT...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp TGGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTAGTTATTTTCTCTCCTaGAGCAAGAATCTGGGATTT +
Preference number: 4 (lower is better)
Translates to: WKCERSSSTKSLCRPKSFSYFLS*SKNLGF
Trigger: AAATCCCAGATTCTTGCTCCAGGAGAGAAAATAACT...AAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR CCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAACTTTGGATTCTCTTTTaGCCAATTACTAAAACTCGG +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKLWILF*PITKTR
Trigger: CCGAGTTTTAGTAATTGGCCAAAAGAGAATCCAAAG...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAATGTTCATCTGACTGGTaGATATGTTCTCTTGCATTA +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKCSSDW*ICSLAL
Trigger: TAATGCAAGAGAACATATCCACCAGTCAGATGAACA...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGTGTTCATCTGACTGGTaGATATGTTCTCTTGCATTA +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRCSSDW*ICSLAL
Trigger: TAATGCAAGAGAACATATCCACCAGTCAGATGAACA...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAATGATATTTTGTTGCTaGATGAGAGGAGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKMIFCC*MRGAVS
Trigger: AGAAACTGCTCCTCTCATCCAGCAACAAAATATCAT...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGCCAAGACTTGGTAACTaGGTGAAGTTAGACTTTTAT +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRPRLGN*VKLDFY
Trigger: ATAAAAGTCTAACTTCACCCAGTTACCAAGTCTTGG...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450251.5
3UTR CAA 72 bp GGATTCTCTTTTGGCCAATTACTAAAACTCGGATCCTaGCTAGATTTAGGCTTATTACTGATATTTGGTTTA +
Preference number: 4 (lower is better)
Translates to: GFSFGQLLKLGS*LDLGLLLIFGL
Trigger: TAAACCAAATATCAGTAATAAGCCTAAATCTAGCAAGGATCCGAGTTTTAGTAATTGGCCAAAAGAGAATCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR GCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAGTCATTAAACCTTTTTaGTTTGGATTCTCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKVIKPF*FGFSFG
Trigger: GCCAAAAGAGAATCCAAAGCAAAAAGGTTTAATGAC...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR GCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGCTGCTTCCTATTTCCTaGTTCATTTCATCTTCATAT +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRLLPIS*FISSSY
Trigger: ATATGAAGATGAAATGAAGCAGGAAATAGGAAGCAG...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR GCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAACTTAAAGGGATCATATaGAGTGACTATCATAGAAGT +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKLKGII*SDYHRS
Trigger: ACTTCTATGATAGTCACTGCATATGATCCCTTTAAG...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGCTGAGAAGTAAAAGTTaGTCAGTTTTACCAGTTATC +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRLRSKS*SVLPVI
Trigger: GATAACTGGTAAAACTGACCAACTTTTACTTCTCAG...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGAGGCTATGTATCACCTaGTACTTTTCAATTAGCATA +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRRLCIT*YFSISI
Trigger: TATGCTAATTGAAAAGTACCAGGTGATACATAGCCT...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CCA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGACGCAATCAGTCAAGTaGCTACATTTACTAGTTTAT +
Preference number: 4 (lower is better)
Translates to: TIYAISQVATFTSLLNMRTQSVK*LHLLVY
Trigger: ATAAACTAGTAAATGTAGCCACTTGACTGATTGCGT...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CCA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAACGCAATCAGTCAAGTaGCTACATTTACTAGTTTAT +
Preference number: 4 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKTQSVK*LHLLVY
Trigger: ATAAACTAGTAAATGTAGCCACTTGACTGATTGCGT...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS CCA 90 bp CCAGACACACTGACTGCTGCCACAGTACCGAGGCTCACCGGGAACTaGAGCACAGGCGGCTGGTCTCCGCCGCCCAGAGCCCGACCCTGT +
Preference number: 5 (lower is better)
Translates to: PDTLTAATVPRLTGN*STGGWSPPPRARPC
Trigger: ACAGGGTCGGGCTCTGGGCGGCGGAGACCAGCCGCCTGTGCTCCAGTTCCCGGTGAGCCTCGGTACTGTGGCAGCAGTCAGTGTGTCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000514665.1
CDS TCA 90 bp TATCTGATTAGGTTCCTCATCCTTCACCATCCTCCAGGTGATGTCTaGTCACCCTGGCCTGCCTTCAACAAGAATCCTGTTAGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: YLIRFLILHHPPGDV*SPWPAFNKNPVRSV
Trigger: AACTGACCTAACAGGATTCTTGTTGAAGGCAGGCCAGGGTGATCAGACATCACCTGGAGGATGGTGAAGGATGAGGAACCTAATCAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS GCA 90 bp AAGGATGAAGCTGCAAGTCAAGGAACACCAAAGATGAACAGCCACTaGCAGAAGTTAGGAAGGGGCAAGGAAAGATTCTATTCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: KDEAASQGTPKMNSH*QKLGRGKERFYSEP
Trigger: GGGCTCTGAATAGAATCTTTCCTTGCCCCTTCCTAACTTCTGGCAGTGGCTGTTCATCTTTGGTGTTCCTTGACTTGCAGCTTCATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS-3UTR CAA 90 bp GACTGTGGCACACTGGTTATAGCATATTTCTTTGGTGGCAAAGGGGGTGGTAGAAGCTGGATGGACAGTTaGGTGTGTTGCCAAAACATT +
Preference number: 5 (lower is better)
Translates to: DCGTLVIAYFFGGKGGGRSWMDS*VCCQNI
Trigger: AATGTTTTGGCAACACACCAAACTGTCCATCCAGCT...TCTACCACCCCCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS GCA 90 bp AGATGTGTTGCTAGATTCCGAACAACAGCTTCGGTCAAGTCAGAATaGTCGGAGTCCCAGACTAAACCAATTGTAACAATCTCTGGGCAA +
Preference number: 5 (lower is better)
Translates to: RCVARFRTTASVKSE*SESQTKPIVTISGQ
Trigger: TTGCCCAGAGATTGTTACAATTGGTTTAGTCTGGGACTCCGAGCATTCTGACTTGACCGAAGCTGTTGTTCGGAATCTAGCAACACATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGACCATCATCACGGAACTaGAGCTCTACCCTCCTTGCG +
Preference number: 5 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRPSSRN*SSTLLA
Trigger: CGCAAGGAGGGTAGAGCTCAAGTTCCGTGATGATGG...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274030.10
CDS-3UTR CAA 90 bp TGGATGAGAGGAGCAGTTTCTGGCTTTAACCCAACAGTTCTTAGGTGTGAAGACATCCATGATATTTTGTaGCTGGATGAGAGGAGCAGT +
Preference number: 5 (lower is better)
Translates to: WMRGAVSGFNPTVLRCEDIHDIL*LDERSS
Trigger: ACTGCTCCTCTCATCCAGCAACAAAATATCATGGAT...GTCTTCACACCTAAGAACTGTTGGGTTAAAGCCAGAAACTGCTCCTCTCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS TCA 90 bp GCCAGCAATAACCTAACATTTATTTGCCTTGACAAAGCCCCAGACTaGACTCTTACTTTATCTATACCTTCCTCCCCATCTCAGCCAATG +
Preference number: 5 (lower is better)
Translates to: ASNNLTFICLDKAPD*TLTLSIPSSPSQPM
Trigger: CATTGGCTGAGATGGGGAGGAAGGTATAGATAAAGTAAGAGTTCAGTCTGGGGCTTTGTCAAGGCAAATAAATGTTAGGTTATTGCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS TCA 90 bp ACTAAGTCAAGTCAGCCATTCTCCTTATCTGATCATCCTCATATCTaGTTAGGTTCCTCATCCTTCACCATCCTCCAGGTGATGTCTGAT +
Preference number: 5 (lower is better)
Translates to: TKSSQPFSLSDHPHI*LGSSSFTILQVMSD
Trigger: ATCAGACATCACCTGGAGGATGGTGAAGGATGAGGAACCTAATCAGATATGAGGATGATCAGATAAGGAGAATGGCTGACTTGACTTAGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS-3UTR CAA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGACAGGACGAAGGGTCTTaGCTTAGACCATCATCACGG +
Preference number: 5 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRQDEGS*LRPSSR
Trigger: CCGTGATGATGGTCTAAGCAAAGACCCTTCGTCCTG...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274030.10
CDS-3UTR CAA 90 bp GACTGTGGCACACTGGTTATAGCATATTTCTTTGGTGGCAAAGGGGGTGGTAGAATTCTTTCAACCTCATaGCATAAGGCTGTTGTAGAA +
Preference number: 5 (lower is better)
Translates to: DCGTLVIAYFFGGKGGGRILSTS*HKAVVE
Trigger: TTCTACAACAGCCTTATGCAATGAGGTTGAAAGAAT...TCTACCACCCCCTTTGCCACCAAAGAAATATGCTATAACCAGTGTGCCACAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS TCA 90 bp CTACGACACACACACTGTTCATACAGAGTCATAGCAAACTTCTGGTaGGTGATACAAGATTTAGAGGTACACATGTCTGCATCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: LRHTHCSYRVIANFW*VIQDLEVHMSASLL
Trigger: AAGCAGAGATGCAGACATGTGTACCTCTAAATCTTGTATCACTCACCAGAAGTTTGCTATGACTCTGTATGAACAGTGTGTGTGTCGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCTCTATCCCTAGAATCTaGGCTGCTGTCTGTGTCATA +
Preference number: 5 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPSIPRI*AAVCVI
Trigger: TATGACACAGACAGCAGCCAAGATTCTAGGGATAGA...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCAGCTGGATGGACAGTTaGGTGTGTTGCCAAAACATT +
Preference number: 5 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPSWMDS*VCCQNI
Trigger: AATGTTTTGGCAACACACCAAACTGTCCATCCAGCT...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS TCA 90 bp CTGCTCATCTTTGAAACTTTCTGCAAGAGCATGCCTTATGTTATCTaGGGGAAGTGCTTTTTCTCGACTGTGTTGGAACTGTGCAAATAT +
Preference number: 5 (lower is better)
Translates to: LLIFETFCKSMPYVI*GKCFFSTVLELCKY
Trigger: ATATTTGCACAGTTCCAACACAGTCGAGAAAAAGCACTTCCCTCAGATAACATAAGGCATGCTCTTGCAGAAAGTTTCAAAGATGAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS TCA 90 bp AAGTCCCAGACCTATGAATGTCAATGTATTTGGCAACAGGGTATTTaGAAATGTTATCAGATTAAGATGAGGTCACTGGGGTGGACCCTA +
Preference number: 5 (lower is better)
Translates to: KSQTYECQCIWQQGI*KCYQIKMRSLGWTL
Trigger: TAGGGTCCACCCCAGTGACCTCATCTTAATCTGATAACATTTTCAAATACCCTGTTGCCAAATACATTGACATTCATAGGTCTGGGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS GCA 90 bp AGCAAACTTCTGGTGAGTGATACAAGATTTAGAGGTACACATGTCTaGATCTCTGCTTGGCACTATGTGAAAATGAATCCTCTCCAACAT +
Preference number: 5 (lower is better)
Translates to: SKLLVSDTRFRGTHV*ISAWHYVKMNPLQH
Trigger: ATGTTGGAGAGGATTCATTTTCACATAGTGCCAAGCAGAGATGCAGACATGTGTACCTCTAAATCTTGTATCACTCACCAGAAGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGATCATTTAACAAGCCTTaGGTAGGGGCTAGTGATAGC +
Preference number: 5 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGSFNKP*VGASDS
Trigger: GCTATCACTAGCCCCTACCAAAGGCTTGTTAAATGA...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCATCCATAAGGCCAAGTaGAAATCGCTGCTCATCTTT +
Preference number: 5 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPIHKAK*KSLLIF
Trigger: AAAGATGAGCAGCGATTTCAACTTGGCCTTATGGAT...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCCTGTGCCATCTGGGTTaGCATAAAACAAAAGTAGTG +
Preference number: 5 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPLCHLG*HKTKVV
Trigger: CACTACTTTTGTTTTATGCAAACCCAGATGGCACAG...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGATCCAGACTCAGTCCTTaGCATCTGCCAATTATCACC +
Preference number: 5 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRSRLSP*HLPIIT
Trigger: GGTGATAATTGGCAGATGCAAAGGACTGAGTCTGGA...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCCTTGCATTATGGTCCTaGGGTATTTGTAGACTGGAT +
Preference number: 5 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPLALWS*GICRLD
Trigger: ATCCAGTCTACAAATACCCAAGGACCATAATGCAAG...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCATCCATGATATTTTGTaGCTGGATGAGAGGAGCAGT +
Preference number: 5 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPIHDIL*LDERSS
Trigger: ACTGCTCCTCTCATCCAGCAACAAAATATCATGGAT...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAGGACAGTTTGGTGTGTaGCCAAAACATTCTCTCACT +
Preference number: 5 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGGQFGV*PKHSLT
Trigger: AGTGAGAGAATGTTTTGGCAACACACCAAACTGTCC...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS GCA 90 bp GCTGCTTGTAGCAATTCTGCAAACATTTCAGGTTTAAAGCGTTCATaGCTTTCCAACATTCTTTCAACCTCATTGCATAAGGCTGTTGTA +
Preference number: 5 (lower is better)
Translates to: AACSNSANISGLKRS*LSNILSTSLHKAVV
Trigger: TACAACAGCCTTATGCAATGAGGTTGAAAGAATGTTGGAAAGGCATGAACGCTTTAAACCTGAAATGTTTGCAGAATTGCTACAAGCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCGCAAGATGCTGTCTCTaGTTCTACTTTTTCATTCCT +
Preference number: 5 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPARCCL*FYFFIP
Trigger: AGGAATGAAAAAGTAGAACAAGAGACAGCATCTTGC...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274030.10
CDS-3UTR CAA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGATCATTTAACAAGCCTTaGGTAGGGGCTAGTGATAGC +
Preference number: 5 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRSFNKP*VGASDS
Trigger: GCTATCACTAGCCCCTACCAAAGGCTTGTTAAATGA...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCTTTTTCTCGACTGTGTaGGAACTGTGCAAATATCGT +
Preference number: 5 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPFFSTV*ELCKYR
Trigger: ACGATATTTGCACAGTTCCAACACAGTCGAGAAAAA...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCAGTCATCTGTTGTATTaGCTGCTTGTAGCAATTCTG +
Preference number: 5 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPSHLLY*LLVAIL
Trigger: CAGAATTGCTACAAGCAGCAAATACAACAGATGACT...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCTCCTATAGTCATCTGTaGTATTTGCTGCTTGTAGCA +
Preference number: 5 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPSYSHL*YLLLVA
Trigger: TGCTACAAGCAGCAAATACAACAGATGACTATAGGA...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCGAAGATAAAGATGTGTaGCTAGATTCCGAACAACAG +
Preference number: 5 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPEDKDV*LDSEQQ
Trigger: CTGTTGTTCGGAATCTAGCAACACATCTTTATCTTC...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAAAAGGCACAATAATGTaGGCTGGTGTAGCAGATCAT +
Preference number: 5 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGKGTIM*AGVADH
Trigger: ATGATCTGCTACACCAGCCAACATTATTGTGCCTTT...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp GGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCTTTGTCCCTTCTTGGCATCGAATGCATTaGGAGACAACATCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: GLHQPNLYVVLNLFFVPSWHRMH*ETTSFH
Trigger: ATGGAAAGATGTTGTCTCCAAATGCATTCGATGCCA...AGAAGGGACAAAGAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507906.5
ENST00000509769.5
CDS-3UTR CAA 90 bp GGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCTTTGTCCCTTCTCTGTGCCATCTGGGTTaGCATAAAACAAAAGTAGTG +
Preference number: 5 (lower is better)
Translates to: GLHQPNLYVVLNLFFVPSLCHLG*HKTKVV
Trigger: CACTACTTTTGTTTTATGCAAACCCAGATGGCACAG...AGAAGGGACAAAGAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507906.5
ENST00000509769.5
CDS-3UTR CAA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAATCCAGACTCAGTCCTTaGCATCTGCCAATTATCACC +
Preference number: 5 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKSRLSP*HLPIIT
Trigger: GGTGATAATTGGCAGATGCAAAGGACTGAGTCTGGA...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGACTTGCATTATGGTCCTaGGGTATTTGTAGACTGGAT +
Preference number: 5 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGLALWS*GICRLD
Trigger: ATCCAGTCTACAAATACCCAAGGACCATAATGCAAG...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATCCATGATATTTTGTaGCTGGATGAGAGGAGCAGT +
Preference number: 5 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGIHDIL*LDERSS
Trigger: ACTGCTCCTCTCATCCAGCAACAAAATATCATGGAT...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp GGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCGGACAGTTTGGTGTGTaGCCAAAACATTCTCTCACT +
Preference number: 5 (lower is better)
Translates to: GNVKGLHQPNLYVVLNLFGQFGV*PKHSLT
Trigger: AGTGAGAGAATGTTTTGGCAACACACCAAACTGTCC...GAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS CCA 90 bp GTGAGTGATACAAGATTTAGAGGTACACATGTCTGCATCTCTGCTTaGCACTATGTGAAAATGAATCCTCTCCAACATATTTTCAAAGCA +
Preference number: 5 (lower is better)
Translates to: VSDTRFRGTHVCISA*HYVKMNPLQHIFKA
Trigger: TGCTTTGAAAATATGTTGGAGAGGATTCATTTTCACATAGTGCCAAGCAGAGATGCAGACATGTGTACCTCTAAATCTTGTATCACTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCACTGCTTATTCTTTATaGTCTCTTCTCCAAATCCAC +
Preference number: 5 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPTAYSL*SLLQIH
Trigger: GTGGATTTGGAGAAGAGACAATAAAGAATAAGCAGT...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274030.10
CDS-3UTR CAA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAATCCATAAGGCCAAGTaGAAATCGCTGCTCATCTTT +
Preference number: 5 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRIHKAK*KSLLIF
Trigger: AAAGATGAGCAGCGATTTCAACTTGGCCTTATGGAT...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGATGTCTGCATCTCTGCTaGGCACTATGTGAAAATGAA +
Preference number: 5 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRCLHLC*ALCENE
Trigger: TTCATTTTCACATAGTGCCAAGCAGAGATGCAGACA...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp GGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCTGTCTGCATCTCTGCTaGGCACTATGTGAAAATGAA +
Preference number: 5 (lower is better)
Translates to: GNVKGLHQPNLYVVLNLFCLHLC*ALCENE
Trigger: TTCATTTTCACATAGTGCCAAGCAGAGATGCAGACA...GAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR CAA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCATTCTTTCAACCTCATaGCATAAGGCTGTTGTAGAA +
Preference number: 5 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPILSTS*HKAVVE
Trigger: TTCTACAACAGCCTTATGCAATGAGGTTGAAAGAAT...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAAGTCATCTGTTGTATTaGCTGCTTGTAGCAATTCTG +
Preference number: 5 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGSHLLY*LLVAIL
Trigger: CAGAATTGCTACAAGCAGCAAATACAACAGATGACT...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGATCCTATAGTCATCTGTaGTATTTGCTGCTTGTAGCA +
Preference number: 5 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGSYSHL*YLLLVA
Trigger: TGCTACAAGCAGCAAATACAACAGATGACTATAGGA...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAGAAGATAAAGATGTGTaGCTAGATTCCGAACAACAG +
Preference number: 5 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGEDKDV*LDSEQQ
Trigger: CTGTTGTTCGGAATCTAGCAACACATCTTTATCTTC...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp GGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCTTTGTCCCTTCTGAAGATAAAGATGTGTaGCTAGATTCCGAACAACAG +
Preference number: 5 (lower is better)
Translates to: GLHQPNLYVVLNLFFVPSEDKDV*LDSEQQ
Trigger: CTGTTGTTCGGAATCTAGCAACACATCTTTATCTTC...AGAAGGGACAAAGAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR CAA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAAAAGGCACAATAATGTaGGCTGGTGTAGCAGATCAT +
Preference number: 5 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRKGTIM*AGVADH
Trigger: ATGATCTGCTACACCAGCCAACATTATTGTGCCTTT...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp GGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCTGGCATCGAATGCATTaGGAGACAACATCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: GNVKGLHQPNLYVVLNLFWHRMH*ETTSFH
Trigger: ATGGAAAGATGTTGTCTCCAAATGCATTCGATGCCA...GAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507906.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAATGTGGATTCCCATGTaGTTTAAAACCATTTGGGGC +
Preference number: 5 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRMWIPM*FKTIWG
Trigger: GCCCCAAATGGTTTTAAACAACATGGGAATCCACAT...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAATCTATCCCTAGAATCTaGGCTGCTGTCTGTGTCATA +
Preference number: 5 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKSIPRI*AAVCVI
Trigger: TATGACACAGACAGCAGCCAAGATTCTAGGGATAGA...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGACTTGCATTATGGTCCTaGGGTATTTGTAGACTGGAT +
Preference number: 5 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRLALWS*GICRLD
Trigger: ATCCAGTCTACAAATACCCAAGGACCATAATGCAAG...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGATTGATCCATGATATTTaGTTGCTGGATGAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRLIHDI*LLDERS
Trigger: GCTCCTCTCATCCAGCAACAAAATATCATGGATCAA...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAAACACCTCTGTAAGTTaGACATCAGGTGTAGATTCG +
Preference number: 5 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRNTSVS*TSGVDS
Trigger: CGAATCTACACCTGATGTCAAACTTACAGAGGTGTT...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAAGCTGGATGGACAGTTaGGTGTGTTGCCAAAACATT +
Preference number: 5 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKSWMDS*VCCQNI
Trigger: AATGTTTTGGCAACACACCAAACTGTCCATCCAGCT...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAGTTCAGAAGGGCAGCTaGAACCAAGATTATTATGTA +
Preference number: 5 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGVQKGS*NQDYYV
Trigger: TACATAATAATCTTGGTTCAAGCTGCCCTTCTGAAC...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp AAGGGATCATATGCAGTGACTATCATAGAAGTCAAAAACAAATGGGTGAAGCCCTATGTATCACTAGGTTaGGTCAGTAGGTTCCTATTA +
Preference number: 5 (lower is better)
Translates to: KGSYAVTIIEVKNKWVKPYVSLG*VSRFLL
Trigger: TAATAGGAACCTACTGACCAAACCTAGTGATACATA...GGGCTTCACCCATTTGTTTTTGACTTCTATGATAGTCACTGCATATGATCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TTATATCTCCCTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGACCAAGCATACCGAGTTaGTCTATTTGGAATTCTTAT +
Preference number: 5 (lower is better)
Translates to: LYLPDFLFFTARQDYSKGPSIPS*SIWNSY
Trigger: ATAAGAATTCCAAATAGACAAACTCGGTATGCTTGG...TCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAGGGAGATATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274030.10
CDS-3UTR CAA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGATTTTTCTCGACTGTGTaGGAACTGTGCAAATATCGT +
Preference number: 5 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRFFSTV*ELCKYR
Trigger: ACGATATTTGCACAGTTCCAACACAGTCGAGAAAAA...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAAATCGCTGCTCATCTTaGAAACTTTCTGCAAGAGCA +
Preference number: 5 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKNRCSS*KLSARA
Trigger: TGCTCTTGCAGAAAGTTTCAAAGATGAGCAGCGATT...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGAATCGCTGCTCATCTTaGAAACTTTCTGCAAGAGCA +
Preference number: 5 (lower is better)
Translates to: TIYAISQVATFTSLLNMRNRCSS*KLSARA
Trigger: TGCTCTTGCAGAAAGTTTCAAAGATGAGCAGCGATT...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CAA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAAATCCATAAGGCCAAGTaGAAATCGCTGCTCATCTTT +
Preference number: 5 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKIHKAK*KSLLIF
Trigger: AAAGATGAGCAGCGATTTCAACTTGGCCTTATGGAT...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAATGTCTGCATCTCTGCTaGGCACTATGTGAAAATGAA +
Preference number: 5 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKCLHLC*ALCENE
Trigger: TTCATTTTCACATAGTGCCAAGCAGAGATGCAGACA...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAATGGCATCGAATGCATTaGGAGACAACATCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKWHRMH*ETTSFH
Trigger: ATGGAAAGATGTTGTCTCCAAATGCATTCGATGCCA...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGTGGCATCGAATGCATTaGGAGACAACATCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: TIYAISQVATFTSLLNMRWHRMH*ETTSFH
Trigger: ATGGAAAGATGTTGTCTCCAAATGCATTCGATGCCA...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CAA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAACTGTGCCATCTGGGTTaGCATAAAACAAAAGTAGTG +
Preference number: 5 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKLCHLG*HKTKVV
Trigger: CACTACTTTTGTTTTATGCAAACCCAGATGGCACAG...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TGGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCTGTGCCATCTGGGTTaGCATAAAACAAAAGTAGTG +
Preference number: 5 (lower is better)
Translates to: WKCERSSSTKSLCRPKSFLCHLG*HKTKVV
Trigger: CACTACTTTTGTTTTATGCAAACCCAGATGGCACAG...AAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507906.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TGGAAATGTGAAAGGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTATGTGGATTCCCATGTaGTTTAAAACCATTTGGGGC +
Preference number: 5 (lower is better)
Translates to: WKCERSSSTKSLCRPKSFMWIPM*FKTIWG
Trigger: GCCCCAAATGGTTTTAAACAACATGGGAATCCACAT...AAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR CAA 90 bp GGTCTTCATCAACCAAATCTCTATGTCGTCCTAAATCTTTTCTTTGTCCCTTCTAGCCACTCAGAAAATTaGCATTCATTCGGTTTTTCA +
Preference number: 5 (lower is better)
Translates to: GLHQPNLYVVLNLFFVPSSHSEN*HSFGFS
Trigger: TGAAAAACCGAATGAATGCAAATTTTCTGAGTGGCT...AGAAGGGACAAAGAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509769.5
CDS-3UTR CAA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGAACACCTCTGTAAGTTaGACATCAGGTGTAGATTCG +
Preference number: 5 (lower is better)
Translates to: TIYAISQVATFTSLLNMRNTSVS*TSGVDS
Trigger: CGAATCTACACCTGATGTCAAACTTACAGAGGTGTT...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CAA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGTTTTTCTCGACTGTGTaGGAACTGTGCAAATATCGT +
Preference number: 5 (lower is better)
Translates to: TIYAISQVATFTSLLNMRFFSTV*ELCKYR
Trigger: ACGATATTTGCACAGTTCCAACACAGTCGAGAAAAA...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CAA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGAGTCATCTGTTGTATTaGCTGCTTGTAGCAATTCTG +
Preference number: 5 (lower is better)
Translates to: TIYAISQVATFTSLLNMRSHLLY*LLVAIL
Trigger: CAGAATTGCTACAAGCAGCAAATACAACAGATGACT...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CAA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGAAGCCACTCAGAAAATTaGCATTCATTCGGTTTTTCA +
Preference number: 5 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRSHSEN*HSFGFS
Trigger: TGAAAAACCGAATGAATGCAAATTTTCTGAGTGGCT...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGATACTCACTTCTAAACTaGGTTCTGAAGCTGTACTTA +
Preference number: 5 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRYSLLN*VLKLYL
Trigger: TAAGTACAGCTTCAGAACCAAGTTTAGAAGTGAGTA...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGGTTCAGAAGGGCAGCTaGAACCAAGATTATTATGTA +
Preference number: 5 (lower is better)
Translates to: TIYAISQVATFTSLLNMRVQKGS*NQDYYV
Trigger: TACATAATAATCTTGGTTCAAGCTGCCCTTCTGAAC...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CAA 90 bp TTACAATGTATGCTAGGTTTATATCTTTGTTCAGAAGGGCAGCTTGAACCAAGATATGTATCACTAGGTTaGGTCAGTAGGTTCCTATTA +
Preference number: 5 (lower is better)
Translates to: LQCMLGLYLCSEGQLEPRYVSLG*VSRFLL
Trigger: TAATAGGAACCTACTGACCAAACCTAGTGATACATA...TCTTGGTTCAAGCTGCCCTTCTGAACAAAGATATAAACCTAGCATACATTGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGATTCTTTCAACCTCATaGCATAAGGCTGTTGTAGAA +
Preference number: 5 (lower is better)
Translates to: TIYAISQVATFTSLLNMRILSTS*HKAVVE
Trigger: TTCTACAACAGCCTTATGCAATGAGGTTGAAAGAAT...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CAA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAACTAAAACTCGGATCCTaGCTAGATTTAGGCTTATTA +
Preference number: 5 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKLKLGS*LDLGLL
Trigger: TAATAAGCCTAAATCTAGCAAGGATCCGAGTTTTAG...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS-3UTR CAA 90 bp ACGATTTACGCAATCAGTCAAGTGGCTACATTTACTAGTTTATTGAATATGAGGCTAAAACTCGGATCCTaGCTAGATTTAGGCTTATTA +
Preference number: 5 (lower is better)
Translates to: TIYAISQVATFTSLLNMRLKLGS*LDLGLL
Trigger: TAATAAGCCTAAATCTAGCAAGGATCCGAGTTTTAG...CCTCATATTCAATAAACTAGTAAATGTAGCCACTTGACTGATTGCGTAAATCGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000450251.5
CDS-3UTR CAA 90 bp CTGATTTTCTATTTTTCACGGCACGCCAAGACTATTCAAAGGGAATTTCTAAAATACTCACTTCTAAACTaGGTTCTGAAGCTGTACTTA +
Preference number: 5 (lower is better)
Translates to: LIFYFSRHAKTIQREFLKYSLLN*VLKLYL
Trigger: TAAGTACAGCTTCAGAACCAAGTTTAGAAGTGAGTA...TTTTAGAAATTCCCTTTGAATAGTCTTGGCGTGCCGTGAAAAATAGAAAATCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS CCA 72 bp CTGACTGCTGCCACAGTACCGAGGCTCACCGGGAACTaGAGCACAGGCGGCTGGTCTCCGCCGCCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: LTAATVPRLTGN*STGGWSPPPRA
Trigger: GGCTCTGGGCGGCGGAGACCAGCCGCCTGTGCTCCAGTTCCCGGTGAGCCTCGGTACTGTGGCAGCAGTCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274030.10
ENST00000514665.1
CDS TCA 72 bp AGGTTCCTCATCCTTCACCATCCTCCAGGTGATGTCTaGTCACCCTGGCCTGCCTTCAACAAGAATCCTGTT +
Preference number: 6 (lower is better)
Translates to: RFLILHHPPGDV*SPWPAFNKNPV
Trigger: AACAGGATTCTTGTTGAAGGCAGGCCAGGGTGATCAGACATCACCTGGAGGATGGTGAAGGATGAGGAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS CCA 72 bp TGGCCTGCCTTCAACAAGAATCCTGTTAGGTCAGTTTaGCCAGAATCCTCTCTTATTCCTAATGTTGCCCCC +
Preference number: 6 (lower is better)
Translates to: WPAFNKNPVRSV*PESSLIPNVAP
Trigger: GGGGGCAACATTAGGAATAAGAGAGGATTCTGGCCAAACTGACCTAACAGGATTCTTGTTGAAGGCAGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS CAA 72 bp GGTCAGTTTGGCCAGAATCCTCTCTTATTCCTAATGTaGCCCCCTAGTAATTTTCCATCCACCAACCACACC +
Preference number: 6 (lower is better)
Translates to: GQFGQNPLLFLM*PPSNFPSTNHT
Trigger: GGTGTGGTTGGTGGATGGAAAATTACTAGGGGGCAACATTAGGAATAAGAGAGGATTCTGGCCAAACTGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS CAA 90 bp ATCCTGTTAGGTCAGTTTGGCCAGAATCCTCTCTTATTCCTAATGTaGCCCCCTAGTAATTTTCCATCCACCAACCACACCCACATCCTT +
Preference number: 6 (lower is better)
Translates to: ILLGQFGQNPLLFLM*PPSNFPSTNHTHIL
Trigger: AAGGATGTGGGTGTGGTTGGTGGATGGAAAATTACTAGGGGGCAACATTAGGAATAAGAGAGGATTCTGGCCAAACTGACCTAACAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS TCA 72 bp AGTCAGCCATTCTCCTTATCTGATCATCCTCATATCTaGTTAGGTTCCTCATCCTTCACCATCCTCCAGGTG +
Preference number: 6 (lower is better)
Translates to: SQPFSLSDHPHI*LGSSSFTILQV
Trigger: CACCTGGAGGATGGTGAAGGATGAGGAACCTAATCAGATATGAGGATGATCAGATAAGGAGAATGGCTGACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS GCA 72 bp GCTAGATTCCGAACAACAGCTTCGGTCAAGTCAGAATaGTCGGAGTCCCAGACTAAACCAATTGTAACAATC +
Preference number: 6 (lower is better)
Translates to: ARFRTTASVKSE*SESQTKPIVTI
Trigger: GATTGTTACAATTGGTTTAGTCTGGGACTCCGAGCATTCTGACTTGACCGAAGCTGTTGTTCGGAATCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS GCA 72 bp CTGCACACTATACAAACTTCTGTTCTCTATATTGTTTaGACTGGCCATTCCCCTGCCTGGAATACATTCCCC +
Preference number: 6 (lower is better)
Translates to: LHTIQTSVLYIV*TGHSPAWNTFP
Trigger: GGGGAATGTATTCCAGGCAGGGGAATGGCCAGTGCAAACAATATAGAGAACAGAAGTTTGTATAGTGTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS CAA 72 bp CCTGCACACTATACAAACTTCTGTTCTCTATATTGTTaGCACTGGCCATTCCCCTGCCTGGAATACATTCCC +
Preference number: 6 (lower is better)
Translates to: PAHYTNFCSLYC*HWPFPCLEYIP
Trigger: GGGAATGTATTCCAGGCAGGGGAATGGCCAGTGCAAACAATATAGAGAACAGAAGTTTGTATAGTGTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS CAA 72 bp CATTCCTGCACACTATACAAACTTCTGTTCTCTATATaGTTTGCACTGGCCATTCCCCTGCCTGGAATACAT +
Preference number: 6 (lower is better)
Translates to: HSCTLYKLLFSI*FALAIPLPGIH
Trigger: ATGTATTCCAGGCAGGGGAATGGCCAGTGCAAACAATATAGAGAACAGAAGTTTGTATAGTGTGCAGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS GCA 72 bp AATCGCTGCTCATCTTTGAAACTTTCTGCAAGAGCATaGCTTATGTTATCTGAGGGAAGTGCTTTTTCTCGA +
Preference number: 6 (lower is better)
Translates to: NRCSSLKLSARA*LMLSEGSAFSR
Trigger: TCGAGAAAAAGCACTTCCCTCAGATAACATAAGGCATGCTCTTGCAGAAAGTTTCAAAGATGAGCAGCGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS GCA 72 bp CTGGTGAGTGATACAAGATTTAGAGGTACACATGTCTaGATCTCTGCTTGGCACTATGTGAAAATGAATCCT +
Preference number: 6 (lower is better)
Translates to: LVSDTRFRGTHV*ISAWHYVKMNP
Trigger: AGGATTCATTTTCACATAGTGCCAAGCAGAGATGCAGACATGTGTACCTCTAAATCTTGTATCACTCACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS CAA 90 bp GCAAACCATCACAATCTCTACCACGCTTTCCAAATTCCTCTTACCTaGTTCTACTTTTTCATTCCTCCTTGGCACTTTTCTCCTTCTAAA +
Preference number: 6 (lower is better)
Translates to: ANHHNLYHAFQIPLT*FYFFIPPWHFSPSK
Trigger: TTTAGAAGGAGAAAAGTGCCAAGGAGGAATGAAAAAGTAGAACAAGGTAAGAGGAATTTGGAAAGCGTGGTAGAGATTGTGATGGTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS TCA 72 bp ACACACTGTTCATACAGAGTCATAGCAAACTTCTGGTaGGTGATACAAGATTTAGAGGTACACATGTCTGCA +
Preference number: 6 (lower is better)
Translates to: THCSYRVIANFW*VIQDLEVHMSA
Trigger: TGCAGACATGTGTACCTCTAAATCTTGTATCACTCACCAGAAGTTTGCTATGACTCTGTATGAACAGTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274030.10
ENST00000450251.5
ENST00000509769.5
CDS TCA 72 bp AACCTAACATTTATTTGCCTTGACAAAGCCCCAGACTaGACTCTTACTTTATCTATACCTTCCTCCCCATCT +
Preference number: 6 (lower is better)
Translates to: NLTFICLDKAPD*TLTLSIPSSPS
Trigger: AGATGGGGAGGAAGGTATAGATAAAGTAAGAGTTCAGTCTGGGGCTTTGTCAAGGCAAATAAATGTTAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS CAA 90 bp TTTCAACTATTCCTCAACTTTTGGACTTCCTTGTTTGTCTCTACGTaGTCCAATTTTAGCAAGAGTCCTACTAAGTCAAGTCAGCCATTC +
Preference number: 6 (lower is better)
Translates to: FQLFLNFWTSLFVST*SNFSKSPTKSSQPF
Trigger: GAATGGCTGACTTGACTTAGTAGGACTCTTGCTAAAATTGGACAACGTAGAGACAAACAAGGAAGTCCAAAAGTTGAGGAATAGTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS CAA 72 bp TTCCTCAACTTTTGGACTTCCTTGTTTGTCTCTACGTaGTCCAATTTTAGCAAGAGTCCTACTAAGTCAAGT +
Preference number: 6 (lower is better)
Translates to: FLNFWTSLFVST*SNFSKSPTKSS
Trigger: ACTTGACTTAGTAGGACTCTTGCTAAAATTGGACAACGTAGAGACAAACAAGGAAGTCCAAAAGTTGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS TCA 72 bp ACCTATGAATGTCAATGTATTTGGCAACAGGGTATTTaGAAATGTTATCAGATTAAGATGAGGTCACTGGGG +
Preference number: 6 (lower is better)
Translates to: TYECQCIWQQGI*KCYQIKMRSLG
Trigger: CCCCAGTGACCTCATCTTAATCTGATAACATTTTCAAATACCCTGTTGCCAAATACATTGACATTCATAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS CAA 90 bp ATAGGCAACCAATACCAATGTCTTATGCGTCCCTTCAGAATTCATTaGTGCAGTTATAAACATATATCCACATTTGCCTTGTTCTACTTT +
Preference number: 6 (lower is better)
Translates to: IGNQYQCLMRPFRIH*CSYKHISTFALFYF
Trigger: AAAGTAGAACAAGGCAAATGTGGATATATGTTTATAACTGCACAAATGAATTCTGAAGGGACGCATAAGACATTGGTATTGGTTGCCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514305.5
CDS CAA 90 bp ACTTTATCTTTCCAGTTGCTGAGAACAAATATCTTGATGTCATCTTaGACTCCTTTTTCTGTCATATTTCAGGATCTGACCACTTTTCAC +
Preference number: 6 (lower is better)
Translates to: TLSFQLLRTNILMSS*TPFSVIFQDLTTFH
Trigger: GTGAAAAGTGGTCAGATCCTGAAATATGACAGAAAAAGGAGTCAAAGATGACATCAAGATATTTGTTCTCAGCAACTGGAAAGATAAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS CAA 90 bp ATAGGCAACCAATACCAATGTCTTATGCGTCCCTTCAGAATTCATTaGTGCAGTTATAAACATATATCCACATTTGCCTGTAAAATAAGG +
Preference number: 6 (lower is better)
Translates to: IGNQYQCLMRPFRIH*CSYKHISTFACKIR
Trigger: CCTTATTTTACAGGCAAATGTGGATATATGTTTATAACTGCACAAATGAATTCTGAAGGGACGCATAAGACATTGGTATTGGTTGCCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS CAA 72 bp TACAGGTGTCAGAAAATATTGACAAAGATTCTCTCATaGATCAAACTCCACTCGAGCTATTCCATGTTCTTT +
Preference number: 6 (lower is better)
Translates to: YRCQKILTKILS*IKLHSSYSMFF
Trigger: AAAGAACATGGAATAGCTCGAGTGGAGTTTGATCAATGAGAGAATCTTTGTCAATATTTTCTGACACCTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514665.1
CDS CAA 72 bp AAAAGTCACTTAAATGAGGCCTACACTTATTTAAAATaGCAAACCATCACAATCTCTACCACGCTTTCCAAA +
Preference number: 6 (lower is better)
Translates to: KSHLNEAYTYLK*QTITISTTLSK
Trigger: TTTGGAAAGCGTGGTAGAGATTGTGATGGTTTGCAATTTTAAATAAGTGTAGGCCTCATTTAAGTGACTTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514665.1