Pregenerated sensors for USP5 (Homo sapiens)
Ensembl gene IDs: ENSG00000111667Ensembl transcript IDs: ENST00000229268.13, ENST00000389231.9, ENST00000535080.1, ENST00000537267.5, ENST00000541969.1, ENST00000542087.1, ENST00000542371.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | AGGGGAGGCACAGGTGATCGCTCCACTGGGAGAGGATaGACAAAGCTACACCCACGCGCACAAACGAGACCC | + |
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Preference number: 3 (lower is better) Translates to: RGGTGDRSTGRG*TKLHPRAQTRP Trigger: GGGTCTCGTTTGTGCGCGTGGGTGTAGCTTTGTGCATCCTCTCCCAGTGGAGCGATCACCTGTGCCTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229268.13 ENST00000389231.9 |
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| CDS CCA 90 bp | TCCGCCTTCAACACCAATAGCCAGCCGCGTGGGCTTCTTCCGGGGTaGGTCTCCAGTGCCTGTAGCAGGGTCCTCCTCTTTCGGGCGCCG | + |
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Preference number: 5 (lower is better) Translates to: SAFNTNSQPRGLLPG*VSSACSRVLLFRAP Trigger: CGGCGCCCGAAAGAGGAGGACCCTGCTACAGGCACTGGAGACCCACCCCGGAAGAAGCCCACGCGGCTGGCTATTGGTGTTGAAGGCGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000542087.1 |
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| CDS GCA 90 bp | TGCTTAGACACCTGCCGTACTTCCCCATCCCATGCCTGCACCTCCTaGTTGCGGGAGGCTGAGTCGGCCGACAGTAGGGCCTCCACTGCA | + |
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Preference number: 5 (lower is better) Translates to: CLDTCRTSPSHACTS*LREAESADSRASTA Trigger: TGCAGTGGAGGCCCTACTGTCGGCCGACTCAGCCTCCCGCAAGCAGGAGGTGCAGGCATGGGATGGGGAAGTACGGCAGGTGTCTAAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229268.13 ENST00000389231.9 |
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| CDS GCA 90 bp | CTGAAGGCATGCTTAGACACCTGCCGTACTTCCCCATCCCATGCCTaGACCTCCTGCTTGCGGGAGGCTGAGTCGGCCGACAGTAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: LKACLDTCRTSPSHA*TSCLREAESADSRA Trigger: GGCCCTACTGTCGGCCGACTCAGCCTCCCGCAAGCAGGAGGTGCAGGCATGGGATGGGGAAGTACGGCAGGTGTCTAAGCATGCCTTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229268.13 ENST00000389231.9 |
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| CDS CCA 90 bp | GGCCTCCAGGCAAGAGCTGAAGGGCACCTGGGCCCGAACCAGTTCTaGCAGTGCCATCTTCTCCTCTTCGGCTTGCCGCTTCTTCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: GLQARAEGHLGPNQF*QCHLLLFGLPLLLL Trigger: GAGGAGAAGAAGCGGCAAGCCGAAGAGGAGAAGATGGCACTGCCAGAACTGGTTCGGGCCCAGGTGCCCTTCAGCTCTTGCCTGGAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000537267.5 ENST00000541969.1 |
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| CDS GCA 90 bp | CTAACGGGTAGCCTGTCTCTCGGTAGTGCTCCACAGCGTGGTTGTTaGCCCCACTGCCATCGAAGTAGCGTCGCCCACAGAGGATGGAGC | + |
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Preference number: 5 (lower is better) Translates to: LTGSLSLGSAPQRGC*PHCHRSSVAHRGWS Trigger: GCTCCATCCTCTGTGGGCGACGCTACTTCGATGGCAGTGGGGGCAACAACCACGCTGTGGAGCACTACCGAGAGACAGGCTACCCGTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229268.13 ENST00000389231.9 |
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| CDS GCA 90 bp | GGGAATGAGGCAAATCGTGTGGTCTTGACAGCTACTGACTTGGCCTaGAGGGCCGTGCTCCAGAAGTCATCGACCTGCTCAGGGGCCCCG | + |
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Preference number: 5 (lower is better) Translates to: GNEANRVVLTATDLA*RAVLQKSSTCSGAP Trigger: CGGGGCCCCTGAGCAGGTCGATGACTTCTGGAGCACGGCCCTGCAGGCCAAGTCAGTAGCTGTCAAGACCACACGATTTGCCTCATTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000537267.5 ENST00000541969.1 |
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| CDS TCA 90 bp | CTTCGTTGCCATAGAAACCAAGGCTACCTTTGGGCTCATCCGGAGTaGCCAGGGGTGGGGCAATGTCTGGCAGCTCCTCCTCTCCGGGCT | + |
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Preference number: 5 (lower is better) Translates to: LRCHRNQGYLWAHPE*PGVGQCLAAPPLRA Trigger: AGCCCGGAGAGGAGGAGCTGCCAGACATTGCCCCACCCCTGGTCACTCCGGATGAGCCCAAAGGTAGCCTTGGTTTCTATGGCAACGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229268.13 ENST00000541969.1 |
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| CDS GCA 90 bp | AGCCTGTCTCTCGGTAGTGCTCCACAGCGTGGTTGTTGCCCCCACTaGCATCGAAGTAGCGTCGCCCACAGAGGATGGAGCCATCAGTCA | + |
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Preference number: 5 (lower is better) Translates to: SLSLGSAPQRGCCPH*HRSSVAHRGWSHQS Trigger: TGACTGATGGCTCCATCCTCTGTGGGCGACGCTACTTCGATGGCAGTGGGGGCAACAACCACGCTGTGGAGCACTACCGAGAGACAGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000229268.13 ENST00000389231.9 |
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| CDS CCA 90 bp | CTGTGCCCCTCAACTGGGAGATGTCGAGCTCCTCTGGCATCTCGATaGACACATCTGTGGGAAAAGGGTCACCTCAGCAGCTCCCGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LCPSTGRCRAPLASR*THLWEKGHLSSSRR Trigger: CCTCCGGGAGCTGCTGAGGTGACCCTTTTCCCACAGATGTGTCCATCGAGATGCCAGAGGAGCTCGACATCTCCCAGTTGAGGGGCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541969.1 |
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| CDS CCA 90 bp | GGGCTGCAGCCCTGTGCCCCTCAACTGGGAGATGTCGAGCTCCTCTaGCATCTCGATGGACACATCTGTGGGAAAAGGGTCACCTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GLQPCAPQLGDVELL*HLDGHICGKRVTSA Trigger: TGCTGAGGTGACCCTTTTCCCACAGATGTGTCCATCGAGATGCCAGAGGAGCTCGACATCTCCCAGTTGAGGGGCACAGGGCTGCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541969.1 |
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| CDS GCA 90 bp | GGAGGGATTCGAGCAGGGTTGTCCAACTGCTTGAGGCTGAAGGCATaGTTAGACACCTGCCGTACTTCCCCATCCCATGCCTGCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: GGIRAGLSNCLRLKA*LDTCRTSPSHACTS Trigger: GGAGGTGCAGGCATGGGATGGGGAAGTACGGCAGGTGTCTAAGCATGCCTTCAGCCTCAAGCAGTTGGACAACCCTGCTCGAATCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229268.13 ENST00000389231.9 |
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| CDS CCA 90 bp | GCCCGTTCTAAACTATTGTTCGTGGCCCGCAGCGCTTTCAAGGCCTaGTCCCGGGAGAAGCCCATGGAGACAATGGTGGTCACACAGTCC | + |
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Preference number: 5 (lower is better) Translates to: ARSKLLFVARSAFKA*SREKPMETMVVTQS Trigger: GGACTGTGTGACCACCATTGTCTCCATGGGCTTCTCCCGGGACCAGGCCTTGAAAGCGCTGCGGGCCACGAACAATAGTTTAGAACGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000537267.5 ENST00000542371.1 |
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| CDS GCA 90 bp | GAGCACTTCCAGCCACAGGGAGGGATTCGAGCAGGGTTGTCCAACTaGTTGAGGCTGAAGGCATGCTTAGACACCTGCCGTACTTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: EHFQPQGGIRAGLSN*LRLKACLDTCRTSP Trigger: TGGGGAAGTACGGCAGGTGTCTAAGCATGCCTTCAGCCTCAAGCAGTTGGACAACCCTGCTCGAATCCCTCCCTGTGGCTGGAAGTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229268.13 ENST00000389231.9 |
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| CDS CCA 90 bp | ACTGGGAGATGTCGAGCTCCTCTGGCATCTCGATGGACACATCTGTaGGAAAAGGGTCACCTCAGCAGCTCCCGGAGGCCTACCCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: TGRCRAPLASRWTHL*EKGHLSSSRRPTQF Trigger: AAACTGGGTAGGCCTCCGGGAGCTGCTGAGGTGACCCTTTTCCCACAGATGTGTCCATCGAGATGCCAGAGGAGCTCGACATCTCCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541969.1 |
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| CDS TCA 90 bp | GCAGGCGTCCATAGGGAATCCCATCTCCACCAGCTGGATGATGACTaGTTCATCCAGCATGGGCGATGTCGGAGAGGAGAAGTGAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: AGVHRESHLHQLDDD*FIQHGRCRRGEVRG Trigger: TCCCCTCACTTCTCCTCTCCGACATCGCCCATGCTGGATGAATCAGTCATCATCCAGCTGGTGGAGATGGGATTCCCTATGGACGCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000229268.13 ENST00000541969.1 ENST00000542371.1 |
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| CDS GCA 90 bp | ACTCAGTCATCGTCTTGTCTGTCTTCTGCATCTTCAGCATGTCGATaGCGAAGTGGGACAGGTGCTCAGCCAGGCTGGGGTCCAGGACCA | + |
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Preference number: 5 (lower is better) Translates to: TQSSSCLSSASSACR*RSGTGAQPGWGPGP Trigger: TGGTCCTGGACCCCAGCCTGGCTGAGCACCTGTCCCACTTCGGCATCGACATGCTGAAGATGCAGAAGACAGACAAGACGATGACTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000535080.1 ENST00000537267.5 |
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| CDS CCA 90 bp | ATCGTCTTGTCTGTCTTCTGCATCTTCAGCATGTCGATGCCGAAGTaGGACAGGTGCTCAGCCAGGCTGGGGTCCAGGACCATGTCATCC | + |
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Preference number: 5 (lower is better) Translates to: IVLSVFCIFSMSMPK*DRCSARLGSRTMSS Trigger: GGATGACATGGTCCTGGACCCCAGCCTGGCTGAGCACCTGTCCCACTTCGGCATCGACATGCTGAAGATGCAGAAGACAGACAAGACGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000535080.1 ENST00000537267.5 |
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| CDS GCA 90 bp | TGGGCCCGAACCAGTTCTGGCAGTGCCATCTTCTCCTCTTCGGCTTaGCGCTTCTTCTCCTCGTACTCCAGAAGCTCCTCTTTGTTAAGG | + |
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Preference number: 5 (lower is better) Translates to: WARTSSGSAIFSSSA*RFFSSYSRSSSLLR Trigger: CCTTAACAAAGAGGAGCTTCTGGAGTACGAGGAGAAGAAGCGGCAAGCCGAAGAGGAGAAGATGGCACTGCCAGAACTGGTTCGGGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000537267.5 ENST00000541969.1 |
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| CDS CCA 90 bp | TCTTCAGCATGTCGATGCCGAAGTGGGACAGGTGCTCAGCCAGGCTaGGGTCCAGGACCATGTCATCCTCATCATATGAGTACACGTCAG | + |
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Preference number: 5 (lower is better) Translates to: SSACRCRSGTGAQPG*GPGPCHPHHMSTRQ Trigger: CTGACGTGTACTCATATGATGAGGATGACATGGTCCTGGACCCCAGCCTGGCTGAGCACCTGTCCCACTTCGGCATCGACATGCTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000535080.1 |
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| CDS CCA 90 bp | GCCACCTGGGTGCTGAAATCCTGGGTAGGGTCCGTCGGGGCATTCTaGAAGATCTTCTCCAGCTTATCCACATACTTCCTCTGGAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: ATWVLKSWVGSVGAF*KIFSSLSTYFLWKS Trigger: TGACTTCCAGAGGAAGTATGTGGATAAGCTGGAGAAGATCTTCCAGAATGCCCCGACGGACCCTACCCAGGATTTCAGCACCCAGGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000537267.5 |
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| CDS CCA 90 bp | TCTTCAGCATGTCGATGCCGAAGTGGGACAGGTGCTCAGCCAGGCTaGGGTCCAGGACCATGTCATCCTCATCATATGAGTACACGTCTA | + |
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Preference number: 5 (lower is better) Translates to: SSACRCRSGTGAQPG*GPGPCHPHHMSTRL Trigger: TAGACGTGTACTCATATGATGAGGATGACATGGTCCTGGACCCCAGCCTGGCTGAGCACCTGTCCCACTTCGGCATCGACATGCTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537267.5 |
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| CDS CCA 90 bp | AGTGGCACACCTGACTCCTGGATCAGCTCCCATTCACCAATCCGCTaGTTCATGTCTATCTCCAACTCAGTCATCGTCTTGTCTGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SGTPDSWISSHSPIR*FMSISNSVIVLSVF Trigger: GAAGACAGACAAGACGATGACTGAGTTGGAGATAGACATGAACCAGCGGATTGGTGAATGGGAGCTGATCCAGGAGTCAGGTGTGCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000535080.1 ENST00000537267.5 |
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| CDS GCA 72 bp | GGTGGGGCAATGTCTGGCAGCTCCTCCTCTCCGGGCTaGAGCCCTGTGCCCCTCAACTGGGAGATGTCGAGC | + |
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Preference number: 6 (lower is better) Translates to: GGAMSGSSSSPG*SPVPLNWEMSS Trigger: GCTCGACATCTCCCAGTTGAGGGGCACAGGGCTGCAGCCCGGAGAGGAGGAGCTGCCAGACATTGCCCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000537267.5 ENST00000541969.1 |
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| CDS TCA 72 bp | CCCACCCCAGCCTACCTGGATCATCCATGTGTGACATaGCCCAGTTCATGGCGGCCTCAGCCCCGCTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: PTPAYLDHPCVT*PSSWRPQPRCC Trigger: GCAACAGCGGGGCTGAGGCCGCCATGAACTGGGTCATGTCACACATGGATGATCCAGGTAGGCTGGGGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542371.1 |
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| CDS GCA 72 bp | CTCGGTAGTGCTCCACAGCGTGGTTGTTGCCCCCACTaGCATCGAAGTAGCGTCGCCCACAGAGGATGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LGSAPQRGCCPH*HRSSVAHRGWS Trigger: GCTCCATCCTCTGTGGGCGACGCTACTTCGATGGCAGTGGGGGCAACAACCACGCTGTGGAGCACTACCGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000229268.13 ENST00000389231.9 |
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| CDS CCA 72 bp | TGGGCATCCTGCTGCCGGTTGGTGGAGAATTCAGGGTaGCCCTTGCCGATGAGGGCCTTGAACATCCGAGGG | + |
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Preference number: 6 (lower is better) Translates to: WASCCRLVENSG*PLPMRALNIRG Trigger: CCCTCGGATGTTCAAGGCCCTCATCGGCAAGGGCCACCCTGAATTCTCCACCAACCGGCAGCAGGATGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000537267.5 |
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| CDS CCA 72 bp | GCAGCGCTTTCAAGGCCTGGTCCCGGGAGAAGCCCATaGAGACAATGGTGGTCACACAGTCCTCAGGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: AALSRPGPGRSP*RQWWSHSPQEG Trigger: CCCCTCCTGAGGACTGTGTGACCACCATTGTCTCCATGGGCTTCTCCCGGGACCAGGCCTTGAAAGCGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000537267.5 ENST00000542371.1 |
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| CDS GCA 72 bp | AGCCTGTCTCTCGGTAGTGCTCCACAGCGTGGTTGTTaGCCCCACTGCCATCGAAGTAGCGTCGCCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: SLSLGSAPQRGC*PHCHRSSVAHR Trigger: TCTGTGGGCGACGCTACTTCGATGGCAGTGGGGGCAACAACCACGCTGTGGAGCACTACCGAGAGACAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229268.13 ENST00000389231.9 |
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| CDS GCA 72 bp | GCTGAAGGGCACCTGGGCCCGAACCAGTTCTGGCAGTaGCATCTTCTCCTCTTCGGCTTGCCGCTTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: AEGHLGPNQFWQ*HLLLFGLPLLL Trigger: GAGAAGAAGCGGCAAGCCGAAGAGGAGAAGATGGCACTGCCAGAACTGGTTCGGGCCCAGGTGCCCTTCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000537267.5 ENST00000541969.1 |
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| CDS CCA 72 bp | AACACCAATAGCCAGCCGCGTGGGCTTCTTCCGGGGTaGGTCTCCAGTGCCTGTAGCAGGGTCCTCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: NTNSQPRGLLPG*VSSACSRVLLF Trigger: AAAGAGGAGGACCCTGCTACAGGCACTGGAGACCCACCCCGGAAGAAGCCCACGCGGCTGGCTATTGGTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000542087.1 |
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| CDS CCA 72 bp | CCATGGCCCAGCTTGGCCACCTGGGTGCTGAAATCCTaGGTAGGGTCCGTCGGGGCATTCTGGAAGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: PWPSLATWVLKS*VGSVGAFWKIF Trigger: GAAGATCTTCCAGAATGCCCCGACGGACCCTACCCAGGATTTCAGCACCCAGGTGGCCAAGCTGGGCCATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000537267.5 |
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| CDS CCA 72 bp | GCAAGAGCTGAAGGGCACCTGGGCCCGAACCAGTTCTaGCAGTGCCATCTTCTCCTCTTCGGCTTGCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: ARAEGHLGPNQF*QCHLLLFGLPL Trigger: AAGCGGCAAGCCGAAGAGGAGAAGATGGCACTGCCAGAACTGGTTCGGGCCCAGGTGCCCTTCAGCTCTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000537267.5 ENST00000541969.1 |
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| CDS CAA 72 bp | TCCTGCTGCCGGTTGGTGGAGAATTCAGGGTGGCCCTaGCCGATGAGGGCCTTGAACATCCGAGGGGCAATG | + |
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Preference number: 6 (lower is better) Translates to: SCCRLVENSGWP*PMRALNIRGAM Trigger: CATTGCCCCTCGGATGTTCAAGGCCCTCATCGGCAAGGGCCACCCTGAATTCTCCACCAACCGGCAGCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000537267.5 |
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| CDS TCA 72 bp | CCAGGCCACCATCCCATCCCTTGCACAGAAGGGACTTaGGGGGACAGAAGGAGAGCCAGTAAGGTCCACCCT | + |
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Preference number: 6 (lower is better) Translates to: PGHHPIPCTEGT*GDRRRASKVHP Trigger: AGGGTGGACCTTACTGGCTCTCCTTCTGTCCCCTCAAGTCCCTTCTGTGCAAGGGATGGGATGGTGGCCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000537267.5 |
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| CDS CCA 72 bp | TGTCGAGCTCCTCTGGCATCTCGATGGACACATCTGTaGGAAAAGGGTCACCTCAGCAGCTCCCGGAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: CRAPLASRWTHL*EKGHLSSSRRP Trigger: AGGCCTCCGGGAGCTGCTGAGGTGACCCTTTTCCCACAGATGTGTCCATCGAGATGCCAGAGGAGCTCGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541969.1 |
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| CDS GCA 72 bp | CGAGCAGGGTTGTCCAACTGCTTGAGGCTGAAGGCATaGTTAGACACCTGCCGTACTTCCCCATCCCATGCC | + |
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Preference number: 6 (lower is better) Translates to: RAGLSNCLRLKA*LDTCRTSPSHA Trigger: GGCATGGGATGGGGAAGTACGGCAGGTGTCTAAGCATGCCTTCAGCCTCAAGCAGTTGGACAACCCTGCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229268.13 ENST00000389231.9 |
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| CDS GCA 72 bp | CAGCCACAGGGAGGGATTCGAGCAGGGTTGTCCAACTaGTTGAGGCTGAAGGCATGCTTAGACACCTGCCGT | + |
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Preference number: 6 (lower is better) Translates to: QPQGGIRAGLSN*LRLKACLDTCR Trigger: ACGGCAGGTGTCTAAGCATGCCTTCAGCCTCAAGCAGTTGGACAACCCTGCTCGAATCCCTCCCTGTGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229268.13 ENST00000389231.9 |
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| CDS CCA 72 bp | GGCCCAAACAGGGGCTTGAGTGGCACACCTGACTCCTaGATCAGCTCCCATTCACCAATCCGCTGGTTCATG | + |
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Preference number: 6 (lower is better) Translates to: GPNRGLSGTPDS*ISSHSPIRWFM Trigger: CATGAACCAGCGGATTGGTGAATGGGAGCTGATCCAGGAGTCAGGTGTGCCACTCAAGCCCCTGTTTGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000535080.1 ENST00000537267.5 |
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| CDS CCA 72 bp | CCCTGTGCCCCTCAACTGGGAGATGTCGAGCTCCTCTaGCATCTCGATGGACACATCCAGTTTCTTGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: PCAPQLGDVELL*HLDGHIQFLGH Trigger: GTGCCCAAGAAACTGGATGTGTCCATCGAGATGCCAGAGGAGCTCGACATCTCCCAGTTGAGGGGCACAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000537267.5 |
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| CDS CCA 72 bp | CCCTGTGCCCCTCAACTGGGAGATGTCGAGCTCCTCTaGCATCTCGATGGACACATCTGTGGGAAAAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: PCAPQLGDVELL*HLDGHICGKRV Trigger: GACCCTTTTCCCACAGATGTGTCCATCGAGATGCCAGAGGAGCTCGACATCTCCCAGTTGAGGGGCACAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541969.1 |
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| CDS GCA 72 bp | TCGTCTTGTCTGTCTTCTGCATCTTCAGCATGTCGATaGCGAAGTGGGACAGGTGCTCAGCCAGGCTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: SSCLSSASSACR*RSGTGAQPGWG Trigger: ACCCCAGCCTGGCTGAGCACCTGTCCCACTTCGGCATCGACATGCTGAAGATGCAGAAGACAGACAAGACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000535080.1 ENST00000537267.5 |
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| CDS GCA 72 bp | GCAAATCGTGTGGTCTTGACAGCTACTGACTTGGCCTaGAGGGCCGTGCTCCAGAAGTCATCGACCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: ANRVVLTATDLA*RAVLQKSSTCS Trigger: TGAGCAGGTCGATGACTTCTGGAGCACGGCCCTGCAGGCCAAGTCAGTAGCTGTCAAGACCACACGATTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000537267.5 ENST00000541969.1 |
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| CDS CAA 72 bp | GAGCACTTCCAGCCACAGGGAGGGATTCGAGCAGGGTaGTCCAACTGCTTGAGGCTGAAGGCATGCTTAGAC | + |
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Preference number: 6 (lower is better) Translates to: EHFQPQGGIRAG*SNCLRLKACLD Trigger: GTCTAAGCATGCCTTCAGCCTCAAGCAGTTGGACAACCCTGCTCGAATCCCTCCCTGTGGCTGGAAGTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229268.13 ENST00000389231.9 |
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| CDS CAA 90 bp | CTGGGCCCGAACCAGTTCTGGCAGTGCCATCTTCTCCTCTTCGGCTaGCCGCTTCTTCTCCTCGTACTCCAGAAGCTCCTCTTTGTTAAG | + |
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Preference number: 6 (lower is better) Translates to: LGPNQFWQCHLLLFG*PLLLLVLQKLLFVK Trigger: CTTAACAAAGAGGAGCTTCTGGAGTACGAGGAGAAGAAGCGGCAAGCCGAAGAGGAGAAGATGGCACTGCCAGAACTGGTTCGGGCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000537267.5 ENST00000541969.1 |
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| CDS TCA 72 bp | CATAGGGAATCCCATCTCCACCAGCTGGATGATGACTaGTTCATCCAGCATGGGCGCTTTGGGCTCATCCGG | + |
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Preference number: 6 (lower is better) Translates to: HRESHLHQLDDD*FIQHGRFGLIR Trigger: CCGGATGAGCCCAAAGCGCCCATGCTGGATGAATCAGTCATCATCCAGCTGGTGGAGATGGGATTCCCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000389231.9 ENST00000537267.5 |
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| CDS CCA 72 bp | TCAACTGGGAGATGTCGAGCTCCTCTGGCATCTCGATaGACACATCTGTGGGAAAAGGGTCACCTCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: STGRCRAPLASR*THLWEKGHLSS Trigger: GCTGCTGAGGTGACCCTTTTCCCACAGATGTGTCCATCGAGATGCCAGAGGAGCTCGACATCTCCCAGTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541969.1 |
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| CDS CAA 72 bp | AATGAGGCAAATCGTGTGGTCTTGACAGCTACTGACTaGGCCTGCAGGGCCGTGCTCCAGAAGTCATCGACC | + |
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Preference number: 6 (lower is better) Translates to: NEANRVVLTATD*ACRAVLQKSST Trigger: GGTCGATGACTTCTGGAGCACGGCCCTGCAGGCCAAGTCAGTAGCTGTCAAGACCACACGATTTGCCTCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000537267.5 ENST00000541969.1 |
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| CDS CAA 90 bp | GAGGGGACAGAAGGAGAGCCAGTAAGGTCCACCCTCTTGGTTCCCTaGAATATGAGTAATATGAGTGCGGTCATGGCCCTTCTGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: EGTEGEPVRSTLLVP*NMSNMSAVMALLGL Trigger: CAGCCCCAGAAGGGCCATGACCGCACTCATATTACTCATATTCAAGGGAACCAAGAGGGTGGACCTTACTGGCTCTCCTTCTGTCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537267.5 |
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| CDS TCA 72 bp | CATAGGGAATCCCATCTCCACCAGCTGGATGATGACTaGTTCATCCAGCATGGGCGATGTCGGAGAGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: HRESHLHQLDDD*FIQHGRCRRGE Trigger: TTCTCCTCTCCGACATCGCCCATGCTGGATGAATCAGTCATCATCCAGCTGGTGGAGATGGGATTCCCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000229268.13 ENST00000541969.1 ENST00000542371.1 |
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| CDS CCA 72 bp | GTGCTGAAATCCTGGGTAGGGTCCGTCGGGGCATTCTaGAAGATCTTCTCCAGCTTATCCACATACTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VLKSWVGSVGAF*KIFSSLSTYFL Trigger: GAGGAAGTATGTGGATAAGCTGGAGAAGATCTTCCAGAATGCCCCGACGGACCCTACCCAGGATTTCAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000537267.5 |
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| CDS CAA 72 bp | CGCTGGGTGTACTTCACCTTCTCTGTGGCCAGGCACTaGATCTTTTCCTCCACCAAGAAGCGGAACACTTCA | + |
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Preference number: 6 (lower is better) Translates to: RWVYFTFSVARH*IFSSTKKRNTS Trigger: TGAAGTGTTCCGCTTCTTGGTGGAGGAAAAGATCAAGTGCCTGGCCACAGAGAAGGTGAAGTACACCCAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000537267.5 ENST00000541969.1 |
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| CDS TCA 72 bp | GCTGGGTGTACTTCACCTTCTCTGTGGCCAGGCACTTaGTCTTTTCCTCCACCAAGAAGCGGAACACTTCAT | + |
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Preference number: 6 (lower is better) Translates to: AGCTSPSLWPGT*SFPPPRSGTLH Trigger: ATGAAGTGTTCCGCTTCTTGGTGGAGGAAAAGATCAAGTGCCTGGCCACAGAGAAGGTGAAGTACACCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000537267.5 ENST00000541969.1 |
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| CDS CCA 72 bp | CCTGACTCCTGGATCAGCTCCCATTCACCAATCCGCTaGTTCATGTCTATCTCCAACTCAGTCATCGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: PDSWISSHSPIR*FMSISNSVIVL Trigger: CAAGACGATGACTGAGTTGGAGATAGACATGAACCAGCGGATTGGTGAATGGGAGCTGATCCAGGAGTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000229268.13 ENST00000389231.9 ENST00000535080.1 ENST00000537267.5 |
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| CDS CAA 72 bp | GAGGGGACAGAAGGAGAGCCAGTAAGGTCCACCCTCTaGGTTCCCTTGAATATGAGTAATATGAGTGCGGTC | + |
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Preference number: 6 (lower is better) Translates to: EGTEGEPVRSTL*VPLNMSNMSAV Trigger: GACCGCACTCATATTACTCATATTCAAGGGAACCAAGAGGGTGGACCTTACTGGCTCTCCTTCTGTCCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537267.5 |
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| CDS CAA 72 bp | GAAGGAGAGCCAGTAAGGTCCACCCTCTTGGTTCCCTaGAATATGAGTAATATGAGTGCGGTCATGGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: EGEPVRSTLLVP*NMSNMSAVMAL Trigger: AAGGGCCATGACCGCACTCATATTACTCATATTCAAGGGAACCAAGAGGGTGGACCTTACTGGCTCTCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537267.5 |
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