RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP48 (Homo sapiens)

Ensembl gene IDs: ENSG00000090686

Ensembl transcript IDs: ENST00000308271.14, ENST00000374730.2, ENST00000374732.7, ENST00000400301.5, ENST00000421625.6, ENST00000464577.1, ENST00000471752.1, ENST00000479177.1, ENST00000487880.2, ENST00000489108.1, ENST00000526044.5, ENST00000527823.5, ENST00000529637.5, ENST00000532737.1, ENST00000534705.5

Found 529 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTGCTTACGCATCTCAGCCATTTCAATACACCACTCCTCAAATTTaGAATTATCCCGATCTACCAGCTCTTGAAGAAAGGCTGGAACTT +
Preference number: 1 (lower is better)
Translates to: FAYASQPFQYTTPQI*NYPDLPALEERLEL
Trigger: AAGTTCCAGCCTTTCTTCAAGAGCTGGTAGATCGGGATAATTCCAAATTTGAGGAGTGGTGTATTGAAATGGCTGAGATGCGTAAGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374730.2
3UTR GCA 90 bp AGTGTTGGGCTTTTCTTGAGTTTGCAGTCTATAAACCAACATATATaGATTTCGAGAGCAATGAGTTCCTTTGCCACACTTGGGTTTACG +
Preference number: 1 (lower is better)
Translates to: SVGLFLSLQSINQHI*ISRAMSSFATLGFT
Trigger: CGTAAACCCAAGTGTGGCAAAGGAACTCATTGCTCTCGAAATGCATATATGTTGGTTTATAGACTGCAAACTCAAGAAAAGCCCAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374730.2
3UTR TCA 90 bp AAATGTTCTCCATCCTTTCTGAAATGCACCAAAGCAAAAAGCCTCTaGAGTCAAAACATGAGACATAATTCCTTGCTCATTGCAGGAGAC +
Preference number: 1 (lower is better)
Translates to: KCSPSFLKCTKAKSL*SQNMRHNSLLIAGD
Trigger: GTCTCCTGCAATGAGCAAGGAATTATGTCTCATGTTTTGACTTCAGAGGCTTTTTGCTTTGGTGCATTTCAGAAAGGATGGAGAACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
3UTR CCA 90 bp TGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACGCATCTaGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCC +
Preference number: 1 (lower is better)
Translates to: CCPIYLIQSFMDQRI*YETRARKYNRTLFP
Trigger: GGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR TCA 90 bp TCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTaGTACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAG +
Preference number: 1 (lower is better)
Translates to: SKITFRSEQNVVPST*YNPLWTNASGMKLE
Trigger: CTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR-3UTR CCA 90 bp GCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACAGACGGCCATGGACCAACGCATCTaGTATGAAACTCGAGCAAGG +
Preference number: 2 (lower is better)
Translates to: AGDMQVPPPLPNTKRQTAMDQRI*YETRAR
Trigger: CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCAT...GGCCGTCTGTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
3UTR-3UTR GCA 90 bp CGGTTACGTGTTGCTAAGAATGATAATCCTGAGTTGGATGGACAGCACATCCATCAGGAGACATGCAGGTaGCCCCTCCTTTACCCAATA +
Preference number: 2 (lower is better)
Translates to: RLRVAKNDNPELDGQHIHQETCR*PLLYPI
Trigger: TATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTG...ATGGATGTGCTGTCCATCCAACTCAGGATTATCATTCTTAGCAACACGTAACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
3UTR-3UTR GCA 90 bp TACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGTGTTCCGTCTTTACTTaGCCCCTCCCACCCACCACC +
Preference number: 2 (lower is better)
Translates to: YFSFRAECCPIYLIQSFMCSVFT*PLPPTT
Trigger: GGTGGTGGGTGGGAGGGGGCAAGTAAAGACGGAACA...CATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR-3UTR TCA 90 bp CGGTTACGTGTTGCTAAGAATGATAATCCTGAGTTGGATGGACAGCACATCCATCATTTCCTTCAAGTCTaGTGTCCATCAGTGCAATCT +
Preference number: 2 (lower is better)
Translates to: RLRVAKNDNPELDGQHIHHFLQV*CPSVQS
Trigger: AGATTGCACTGATGGACATCAGACTTGAAGGAAATG...ATGGATGTGCTGTCCATCCAACTCAGGATTATCATTCTTAGCAACACGTAACCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
3UTR-3UTR TCA 90 bp CATCTCAGCCATTTCAATACACCACTCCTCAAATTTGGAATTATCCCGATCTACGCATTTCGAGAGCAATaGGTTCCTTTGCCACACTTG +
Preference number: 2 (lower is better)
Translates to: HLSHFNTPLLKFGIIPIYAFREQ*VPLPHL
Trigger: CAAGTGTGGCAAAGGAACTCATTGCTCTCGAAATGC...GTAGATCGGGATAATTCCAAATTTGAGGAGTGGTGTATTGAAATGGCTGAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374730.2
3UTR-3UTR CCA 90 bp TCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTTTGAATACTCCTCTTCCCCTCTaGTCATTTCTTAGCAGTCAG +
Preference number: 2 (lower is better)
Translates to: SVQSALFDIRHLGQSRLNTPLPL*SFLSSQ
Trigger: CTGACTGCTAAGAAATGACCAGAGGGGAAGAGGAGT...ATTCAAACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR-3UTR TCA 90 bp TTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTGGGACAGTCACGTTTaGATGGATTTCTGCCTTTTG +
Preference number: 2 (lower is better)
Translates to: FMDQRIWYETRARKYNRTWDSHV*MDFCLL
Trigger: CAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCA...AGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR-3UTR CCA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACTGGATTTCTGCCTTTTaGAAGGGGCATGTAATGGTT +
Preference number: 2 (lower is better)
Translates to: IWYETRARKYNRTLFPSHWISAF*KGHVMV
Trigger: AACCATTACATGCCCCTTCCAAAAGGCAGAAATCCA...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR CAA 90 bp CTCTTGAAGAAAGGCTGGAACTTGAACAGTAGTGTTGGGCTTTTCTaGAGTTTGCAGTCTATAAACCAACATATATGCATTTCGAGAGCA +
Preference number: 2 (lower is better)
Translates to: LLKKGWNLNSSVGLF*SLQSINQHICISRA
Trigger: TGCTCTCGAAATGCATATATGTTGGTTTATAGACTGCAAACTCAAGAAAAGCCCAACACTACTGTTCAAGTTCCAGCCTTTCTTCAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374730.2
3UTR-3UTR TCA 90 bp TACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGTGGGACAGTCACGTTTaGATGGATTTCTGCCTTTTG +
Preference number: 2 (lower is better)
Translates to: YFSFRAECCPIYLIQSFMWDSHV*MDFCLL
Trigger: CAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCA...CATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR-3UTR CCA 90 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACTCCTCTTCCCCTCTaGTCATTTCTTAGCAGTCAG +
Preference number: 2 (lower is better)
Translates to: MSLKLLFVQSRMLSHLLDTPLPL*SFLSSQ
Trigger: CTGACTGCTAAGAAATGACCAGAGGGGAAGAGGAGT...ATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR-3UTR CCA 90 bp TTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTGGATTTCTGCCTTTTaGAAGGGGCATGTAATGGTT +
Preference number: 2 (lower is better)
Translates to: FMDQRIWYETRARKYNRTWISAF*KGHVMV
Trigger: AACCATTACATGCCCCTTCCAAAAGGCAGAAATCCA...AGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR-3UTR CCA 90 bp ATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGATGGACCAACGCATCTaGTATGAAACTCGAGCAAGG +
Preference number: 2 (lower is better)
Translates to: IGKQVMSLKLLFVQSRMLMDQRI*YETRAR
Trigger: CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCAT...CAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR CAA 90 bp AAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTaGTCCCATCTACTTGATACAATCCTTTATGGACCAACGCATCTG +
Preference number: 2 (lower is better)
Translates to: KQVMSLKLLFVQSRM*SHLLDTILYGPTHL
Trigger: CAGATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACATAACCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR CAA 90 bp AAGAAAGGCTGGAACTTGAACAGTAGTGTTGGGCTTTTCTTGAGTTaGCAGTCTATAAACCAACATATATGCATTTCGAGAGCAATGAGT +
Preference number: 2 (lower is better)
Translates to: KKGWNLNSSVGLFLS*QSINQHICISRAMS
Trigger: ACTCATTGCTCTCGAAATGCATATATGTTGGTTTATAGACTGCAAACTCAAGAAAAGCCCAACACTACTGTTCAAGTTCCAGCCTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374730.2
3UTR-3UTR TCA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATTGGGACAGTCACGTTTaGATGGATTTCTGCCTTTTG +
Preference number: 2 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYWDSHV*MDFCLL
Trigger: CAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCA...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR-3UTR TCA 90 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATCCAACGCATCTGGTATaGAACTCGAGCAAGGAAATA +
Preference number: 2 (lower is better)
Translates to: MSLKLLFVQSRMLSHLLDPTHLV*NSSKEI
Trigger: TATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGG...ATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR-3UTR GCA 90 bp AAAGGGATAAGCTGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGATTAGGTCACAAAGTATaGAAAGAAACAGAACAGGCA +
Preference number: 2 (lower is better)
Translates to: KGISWIMWDISKKSGVSRLGHKV*KETEQA
Trigger: TGCCTGTTCTGTTTCTTTGCATACTTTGTGACCTAA...TCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
3UTR-3UTR GCA 90 bp TTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTCTGATGTCCATCAGTaGAATCTGCTTTATTTGACA +
Preference number: 2 (lower is better)
Translates to: FMDQRIWYETRARKYNRTSDVHQ*NLLYLT
Trigger: TGTCAAATAAAGCAGATTGCACTGATGGACATCAGA...AGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR-3UTR CCA 90 bp CTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCTGGATTTCTGCCTTTTaGAAGGGGCATGTAATGGTT +
Preference number: 2 (lower is better)
Translates to: LKLLFVQSRMLSHLLDTIWISAF*KGHVMV
Trigger: AACCATTACATGCCCCTTCCAAAAGGCAGAAATCCA...GATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR-3UTR CCA 90 bp AGAATGTCTGTTAAAACTGTTAGGTCACAAAGTATGCAAAGAAACAGAACAGGCTATCTACAATACTCATaGATGCAGAGTGCTGACCTA +
Preference number: 2 (lower is better)
Translates to: RMSVKTVRSQSMQRNRTGYLQYS*MQSADL
Trigger: TAGGTCAGCACTCTGCATCCATGAGTATTGTAGATA...GCCTGTTCTGTTTCTTTGCATACTTTGTGACCTAACAGTTTTAACAGACATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
3UTR-3UTR GCA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGTCTGATGTCCATCAGTaGAATCTGCTTTATTTGACA +
Preference number: 2 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQSDVHQ*NLLYLT
Trigger: TGTCAAATAAAGCAGATTGCACTGATGGACATCAGA...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR-3UTR GCA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTACAGAACAGGCAAGTTaGTTTTTCCATAGTAATCCA +
Preference number: 2 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGTEQAS*FFHSNP
Trigger: TGGATTACTATGGAAAAAGCAACTTGCCTGTTCTGT...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421625.6
3UTR-3UTR TCA 90 bp ACCCCTTCAATATTCTTAAGAATATTGCTTCGGTTACGTGTTGCTAAGAATGATTCTGAAGTCAAAACATaGGACATAATTCCTTGCTCA +
Preference number: 2 (lower is better)
Translates to: TPSIFLRILLRLRVAKNDSEVKT*DIIPCS
Trigger: TGAGCAAGGAATTATGTCTCATGTTTTGACTTCAGA...ATCATTCTTAGCAACACGTAACCGAAGCAATATTCTTAAGAATATTGAAGGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
3UTR-3UTR TCA 90 bp ACCCCTTCAATATTCTTAAGAATATTGCTTCGGTTACGTGTTGCTAAGAATGATTACATTTCCCACTTTTaGATAACAGCAAAACCGGAA +
Preference number: 2 (lower is better)
Translates to: TPSIFLRILLRLRVAKNDYISHF*ITAKPE
Trigger: TTCCGGTTTTGCTGTTATTCAAAAGTGGGAAATGTA...ATCATTCTTAGCAACACGTAACCGAAGCAATATTCTTAAGAATATTGAAGGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
3UTR GCA 72 bp GACATAATTCCTTGCTCATTGCAGGAGACATGCAGGTaGCCCCTCCTTTACCCAATACCAAGAGACAGACGG +
Preference number: 3 (lower is better)
Translates to: DIIPCSLQETCR*PLLYPIPRDRR
Trigger: CCGTCTGTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGCAATGAGCAAGGAATTATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
3UTR-3UTR CAA 90 bp TGCTCATTGCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACTTGGGACAGTCACGTTaGAATGGATTTCTGCCTTTT +
Preference number: 3 (lower is better)
Translates to: CSLQETCRCPLLYPIPRDLGQSR*NGFLPF
Trigger: AAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAA...GTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGCAATGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
3UTR-3UTR CAA 90 bp TCCTTTATCCACACTTTGCTTACGCATCTCAGCCATTTCAATACACCACTCCTCCCGATCTACCAGCTCTaGAAGAAAGGCTGGAACTTG +
Preference number: 3 (lower is better)
Translates to: SFIHTLLTHLSHFNTPLLPIYQL*KKGWNL
Trigger: CAAGTTCCAGCCTTTCTTCAAGAGCTGGTAGATCGG...GAGGAGTGGTGTATTGAAATGGCTGAGATGCGTAAGCAAAGTGTGGATAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374730.2
3UTR-3UTR CAA 90 bp CGGTTACGTGTTGCTAAGAATGATAATCCTGAGTTGGATGGACAGCACATCCATGTTCAGAGCAGAATGTaGTCCCATCTACTTGATACA +
Preference number: 3 (lower is better)
Translates to: RLRVAKNDNPELDGQHIHVQSRM*SHLLDT
Trigger: TGTATCAAGTAGATGGGACAACATTCTGCTCTGAAC...ATGGATGTGCTGTCCATCCAACTCAGGATTATCATTCTTAGCAACACGTAACCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
3UTR TCA 72 bp ACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTaGTACAATCCTTTATGGACCAACGCATCTGGTATG +
Preference number: 3 (lower is better)
Translates to: TFRSEQNVVPST*YNPLWTNASGM
Trigger: CATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR TCA 72 bp AATGCACCAAAGCAAAAAGCCTCTGAAGTCAAAACATaGGACATAATTCCTTGCTCATTGCAGGAGACATGC +
Preference number: 3 (lower is better)
Translates to: NAPKQKASEVKT*DIIPCSLQETC
Trigger: GCATGTCTCCTGCAATGAGCAAGGAATTATGTCTCATGTTTTGACTTCAGAGGCTTTTTGCTTTGGTGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
3UTR-3UTR CAA 90 bp CCTCAAATTTGGAATTATCCCGATCTACCAGCTCTTGAAGAAAGGCTGGAACTTAGTGTTGGGCTTTTCTaGAGTTTGCAGTCTATAAAC +
Preference number: 3 (lower is better)
Translates to: PQIWNYPDLPALEERLELSVGLF*SLQSIN
Trigger: GTTTATAGACTGCAAACTCAAGAAAAGCCCAACACT...AAGTTCCAGCCTTTCTTCAAGAGCTGGTAGATCGGGATAATTCCAAATTTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374730.2
3UTR-3UTR CAA 90 bp TACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGATGGATTTCTGCCTTTaGGAAGGGGCATGTAATGGT +
Preference number: 3 (lower is better)
Translates to: YFSFRAECCPIYLIQSFMMDFCL*EGACNG
Trigger: ACCATTACATGCCCCTTCCAAAAGGCAGAAATCCAT...CATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR-3UTR CAA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACTTTGACATAAGGCATTaGGGACAGTCACGTTTGAAT +
Preference number: 3 (lower is better)
Translates to: IWYETRARKYNRTLFPSHFDIRH*GQSRLN
Trigger: ATTCAAACGTGACTGTCCCAAATGCCTTATGTCAAA...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR-3UTR CAA 90 bp AAATTTGGAATTATCCCGATCTACCAGCTCTTGAAGAAAGGCTGGAACTTGAACGGGCTTTTCTTGAGTTaGCAGTCTATAAACCAACAT +
Preference number: 3 (lower is better)
Translates to: KFGIIPIYQLLKKGWNLNGLFLS*QSINQH
Trigger: ATGTTGGTTTATAGACTGCAAACTCAAGAAAAGCCC...GTTCAAGTTCCAGCCTTTCTTCAAGAGCTGGTAGATCGGGATAATTCCAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374730.2
3UTR GCA 72 bp CTTTTCTTGAGTTTGCAGTCTATAAACCAACATATATaGATTTCGAGAGCAATGAGTTCCTTTGCCACACTT +
Preference number: 3 (lower is better)
Translates to: LFLSLQSINQHI*ISRAMSSFATL
Trigger: AAGTGTGGCAAAGGAACTCATTGCTCTCGAAATGCATATATGTTGGTTTATAGACTGCAAACTCAAGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374730.2
3UTR CCA 72 bp ATCTACTTGATACAATCCTTTATGGACCAACGCATCTaGTATGAAACTCGAGCAAGGAAATATAACAGAACT +
Preference number: 3 (lower is better)
Translates to: IYLIQSFMDQRI*YETRARKYNRT
Trigger: AGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR-3UTR CAA 90 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATTTTGACATAAGGCATTaGGGACAGTCACGTTTGAAT +
Preference number: 3 (lower is better)
Translates to: MSLKLLFVQSRMLSHLLDFDIRH*GQSRLN
Trigger: ATTCAAACGTGACTGTCCCAAATGCCTTATGTCAAA...ATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR CCA 72 bp ATAAACATATACAGAAAAGGGATAAGCTGGATTATGTaGGATATTTCTAAGAAATCAGGGGTCAGCAGAAAG +
Preference number: 3 (lower is better)
Translates to: INIYRKGISWIM*DISKKSGVSRK
Trigger: CTTTCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTTTCTGTATATGTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CCA 90 bp TACCCAATACCAAGAGACAGACGGCCGGGCAGGTGTAAGGCGGGTGGCGCTGCATGTTCAAGAGCTAGCTaGCGCCAACTCCGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: YPIPRDRRPGRCKAGGAACSRAS*RQLRKE
Trigger: CTCCTTGCGGAGTTGGCGCCAGCTAGCTCTTGAACA...TGCAGCGCCACCCGCCTTACACCTGCCCGGCCGTCTGTCTCTTGGTATTGGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp TACCCAATACCAAGAGACAGACGGCCGGGCAGGTGTAAGGCGGGTGGCGCTGCACAGGAGACATGCAGGTaGCCCCTCCTTTACCCAATA +
Preference number: 4 (lower is better)
Translates to: YPIPRDRRPGRCKAGGAAQETCR*PLLYPI
Trigger: TATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTG...TGCAGCGCCACCCGCCTTACACCTGCCCGGCCGTCTGTCTCTTGGTATTGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp TACCCAATACCAAGAGACAGACGGCCGGGCAGGTGTAAGGCGGGTGGCGCTGCATCATTGCAGGAGACATaGAGGTGCCCCCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: YPIPRDRRPGRCKAGGAASLQET*RCPLLY
Trigger: GTAAAGGAGGGGGCACCTGCATGTCTCCTGCAATGA...TGCAGCGCCACCCGCCTTACACCTGCCCGGCCGTCTGTCTCTTGGTATTGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp CTATTACTGCTACTAAACTTGTTCCGTCTTTACTTGCCCCCTCCCACCCACCACGCACCGCCGCCCCAATaGGCTTCGCCACCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLLLLNLFRLYLPPPTHHAPPPQ*ASPPAS
Trigger: GCTGGCAGGTGGCGAAGCCCATTGGGGCGGCGGTGC...GTGGTGGGTGGGAGGGGGCAAGTAAAGACGGAACAAGTTTAGTAGCAGTAATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp GCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACAGACGGCCAGGTCCCTCTGCTGCTaGCACAATAAGCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: AGDMQVPPPLPNTKRQTARSLCC*HNKPSL
Trigger: CAGAGAAGGCTTATTGTGTCAGCAGCAGAGGGACCT...GGCCGTCTGTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp GCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACAGACGGCCGCCTTTGGAAAGTACTaGTGCAGTTTGCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: AGDMQVPPPLPNTKRQTAAFGKY*CSLLQA
Trigger: GGCTTGGAGCAAACTGCAGCAGTACTTTCCAAAGGC...GGCCGTCTGTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp TGCTCATTGCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACGGGTGGCGCTGCAGCTaGCATGGAGAAGAGTCTAAA +
Preference number: 4 (lower is better)
Translates to: CSLQETCRCPLLYPIPRDGWRCS*HGEESK
Trigger: TTTAGACTCTTCTCCATGTCAGCTGCAGCGCCACCC...GTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGCAATGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACGCAGCCGCGGGGCCATaGCCTTGGCCCCAGGAACGC +
Preference number: 4 (lower is better)
Translates to: IWYETRARKYNRTLFPSHAAAGP*PWPQER
Trigger: GCGTTCCTGGGGCCAAGGCCATGGCCCCGCGGCTGC...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp TGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACGACTCCCCGCCGCGCTaGGCGCATGCGCGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: WIMWDISKKSGVSRKLFYDSPPR*AHARSQ
Trigger: CTGGGAACGCGCATGCGCTCAGCGCGGCGGGGAGTC...GTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR GCA 90 bp TACCCAATACCAAGAGACAGACGGCCGGGCAGGTGTAAGGCGGGTGGCGCTGCATTCTTATGTCCAGTTTaGCTGTCAAAGACAAAACGC +
Preference number: 4 (lower is better)
Translates to: YPIPRDRRPGRCKAGGAAFLCPV*LSKTKR
Trigger: GCGTTTTGTCTTTGACAGGCAAACTGGACATAAGAA...TGCAGCGCCACCCGCCTTACACCTGCCCGGCCGTCTGTCTCTTGGTATTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp TACCCAATACCAAGAGACAGACGGCCGGGCAGGTGTAAGGCGGGTGGCGCTGCACATTGCAGCATAATCTaGAATTGGTTCATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: YPIPRDRRPGRCKAGGAAHCSII*NWFISL
Trigger: AAGGCTGATGAACCAATTGCAGATTATGCTGCAATG...TGCAGCGCCACCCGCCTTACACCTGCCCGGCCGTCTGTCTCTTGGTATTGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp CTATTACTGCTACTAAACTTGTTCCGTCTTTACTTGCCCCCTCCCACCCACCACTGTTCCGTCTTTACTTaGCCCCTCCCACCCACCACC +
Preference number: 4 (lower is better)
Translates to: LLLLLNLFRLYLPPPTHHCSVFT*PLPPTT
Trigger: GGTGGTGGGTGGGAGGGGGCAAGTAAAGACGGAACA...GTGGTGGGTGGGAGGGGGCAAGTAAAGACGGAACAAGTTTAGTAGCAGTAATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp TACCCAATACCAAGAGACAGACGGCCGGGCAGGTGTAAGGCGGGTGGCGCTGCACTTTATGGACATAGATaGTGGCTTGAGTGTATTCAC +
Preference number: 4 (lower is better)
Translates to: YPIPRDRRPGRCKAGGAALYGHR*WLECIH
Trigger: GTGAATACACTCAAGCCACCATCTATGTCCATAAAG...TGCAGCGCCACCCGCCTTACACCTGCCCGGCCGTCTGTCTCTTGGTATTGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp AAAGGGATAAGCTGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGACCAGTCAATCACCTGTaGGCGCCACTGCCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: KGISWIMWDISKKSGVSRPVNHL*APLPPR
Trigger: GCGCGGCGGCAGTGGCGCGCACAGGTGATTGACTGG...TCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR GCA 90 bp GCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACAGACGGCCCCTTTATCCACACTTTaGTTACGCATCTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: AGDMQVPPPLPNTKRQTAPLSTL*LRISAI
Trigger: AATGGCTGAGATGCGTAAGCAAAGTGTGGATAAAGG...GGCCGTCTGTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp AAAGGGATAAGCTGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAGTTCCCAGCAGCCTCTaGGCCTCCCGCGCCCCTAAC +
Preference number: 4 (lower is better)
Translates to: KGISWIMWDISKKSGVSRVPSSL*ASRAPN
Trigger: GTTAGGGGCGCGGGAGGCGCAGAGGCTGCTGGGAAC...TCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CCA 90 bp TGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACGCACCGCCGCCCCAATaGGCTTCGCCACCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: WIMWDISKKSGVSRKLFYAPPPQ*ASPPAS
Trigger: GCTGGCAGGTGGCGAAGCCCATTGGGGCGGCGGTGC...GTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CCA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTGCAGCCGCGGGGCCATaGCCTTGGCCCCAGGAACGC +
Preference number: 4 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGAAAGP*PWPQER
Trigger: GCGTTCCTGGGGCCAAGGCCATGGCCCCGCGGCTGC...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR TCA 90 bp GCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACAGACGGCCGTTCTCCATCCTTTCTaGAATGCACCAAAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: AGDMQVPPPLPNTKRQTAVLHPF*NAPKQK
Trigger: TTTTTGCTTTGGTGCATTTCAGAAAGGATGGAGAAC...GGCCGTCTGTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp GCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACAGACGGCCGTCAAAAGGAGCAACTaGAAATGCATGCATGATTTG +
Preference number: 4 (lower is better)
Translates to: AGDMQVPPPLPNTKRQTAVKRSN*KCMHDL
Trigger: CAAATCATGCATGCATTTTCAGTTGCTCCTTTTGAC...GGCCGTCTGTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400301.5
CDS-3UTR GCA 90 bp AGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACGCATCATGGGCTTCGCCACCTaGCAGCAAGGAGGACCTGGC +
Preference number: 4 (lower is better)
Translates to: RAECCPIYLIQSFMDQRIMGFAT*QQGGPG
Trigger: GCCAGGTCCTCCTTGCTGGCAGGTGGCGAAGCCCAT...GATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp AAAGGGATAAGCTGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAGTCTCGATGTGCTCCTaGGACACCTCCTCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: KGISWIMWDISKKSGVSRVSMCS*DTSSGR
Trigger: GCGGCCCGAGGAGGTGTCGCAGGAGCACATCGAGAC...TCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR GCA 90 bp TACTTGATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGTGCACACGCCGCGAATaGAGGGCTCCAGCCAGATGC +
Preference number: 4 (lower is better)
Translates to: YLIQSFMDQRIWYETRARCTRRE*RAPARC
Trigger: GCATCTGGCTGGAGCCCTGCATTCGCGGCGTGTGCA...CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp TGTCCATCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTCCAGCAAGGAGGACCTaGCGCTCCTTCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: CPSVQSALFDIRHLGQSRPARRT*RSFRQL
Trigger: CAGCTGCCTGAAGGAGCGCCAGGTCCTCCTTGCTGG...ACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGATGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp ATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGGCAGCCGCGGGGCCATaGCCTTGGCCCCAGGAACGC +
Preference number: 4 (lower is better)
Translates to: IGKQVMSLKLLFVQSRMLAAAGP*PWPQER
Trigger: GCGTTCCTGGGGCCAAGGCCATGGCCCCGCGGCTGC...CAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp GCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACAGACGGCCTTCTCCTCTCACAGTTaGGATCATCGATGTTATGAA +
Preference number: 4 (lower is better)
Translates to: AGDMQVPPPLPNTKRQTAFSSHS*DHRCYE
Trigger: TTCATAACATCGATGATCCCAACTGTGAGAGGAGAA...GGCCGTCTGTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp CTATTACTGCTACTAAACTTGTTCCGTCTTTACTTGCCCCCTCCCACCCACCACGACATCCGTATCCTCTaGCCAGTTACTGAGACACGG +
Preference number: 4 (lower is better)
Translates to: LLLLLNLFRLYLPPPTHHDIRIL*PVTETR
Trigger: CCGTGTCTCAGTAACTGGCCAGAGGATACGGATGTC...GTGGTGGGTGGGAGGGGGCAAGTAAAGACGGAACAAGTTTAGTAGCAGTAATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp TGCTCATTGCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACACTCCTCTTCCCCTCTaGTCATTTCTTAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: CSLQETCRCPLLYPIPRDTPLPL*SFLSSQ
Trigger: CTGACTGCTAAGAAATGACCAGAGGGGAAGAGGAGT...GTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGCAATGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp TGCTCATTGCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACATGGACCAACGCATCTaGTATGAAACTCGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: CSLQETCRCPLLYPIPRDMDQRI*YETRAR
Trigger: CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCAT...GTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGCAATGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp ATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATGTCTCGATGTGCTCCTaGGACACCTCCTCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: IQSFMDQRIWYETRARKYVSMCS*DTSSGR
Trigger: GCGGCCCGAGGAGGTGTCGCAGGAGCACATCGAGAC...ATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp TGCTCATTGCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACTCATCCAACCACTTTTaGAGCCATTCCAGAGAGACA +
Preference number: 4 (lower is better)
Translates to: CSLQETCRCPLLYPIPRDSSNHF*SHSRET
Trigger: TGTCTCTCTGGAATGGCTGCAAAAGTGGTTGGATGA...GTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGCAATGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTGCCGCGCTGAGCGCATaGGCGTTCCCAGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGAALSA*AFPAAS
Trigger: AGAGGCTGCTGGGAACGCGCATGCGCTCAGCGCGGC...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CCA 90 bp ATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGGCACCGCCGCCCCAATaGGCTTCGCCACCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: IGKQVMSLKLLFVQSRMLAPPPQ*ASPPAS
Trigger: GCTGGCAGGTGGCGAAGCCCATTGGGGCGGCGGTGC...CAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp CATAAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGTGTTCAAGAGCTAGCTaGCGCCAACTCCGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: HKAFGTVTFEWISAFWKGCSRAS*RQLRKE
Trigger: CTCCTTGCGGAGTTGGCGCCAGCTAGCTCTTGAACA...CCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp TGCTCATTGCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACGGCTTTAACAAATCCTaGTGGATCAATGTATCGCCT +
Preference number: 4 (lower is better)
Translates to: CSLQETCRCPLLYPIPRDGFNKS*WINVSP
Trigger: AGGCGATACATTGATCCATCAGGATTTGTTAAAGCC...GTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGCAATGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp AAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGCATAGGTCCCTCTGCTGCTaGCACAATAAGCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: KAFGTVTFEWISAFWKGHRSLCC*HNKPSL
Trigger: CAGAGAAGGCTTATTGTGTCAGCAGCAGAGGGACCT...ATGCCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp CTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCCAGTCAATCACCTGTaGGCGCCACTGCCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: LKLLFVQSRMLSHLLDTIPVNHL*APLPPR
Trigger: GCGCGGCGGCAGTGGCGCGCACAGGTGATTGACTGG...GATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp TGTCCATCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTAGGGCTCCAGCCAGATaGGGTAAGCGGTCTCGATGT +
Preference number: 4 (lower is better)
Translates to: CPSVQSALFDIRHLGQSRRAPAR*GKRSRC
Trigger: ACATCGAGACCGCTTACCGCATCTGGCTGGAGCCCT...ACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGATGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp ATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACGACTATATGCACACGCCGCGAATaGAGGGCTCCAGCCAGATGC +
Preference number: 4 (lower is better)
Translates to: MKLEQGNITELYSPPTTICTRRE*RAPARC
Trigger: GCATCTGGCTGGAGCCCTGCATTCGCGGCGTGTGCA...TATAGTCGTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp AAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGCATTCATTGCAGGAGACATaGAGGTGCCCCCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: KAFGTVTFEWISAFWKGHSLQET*RCPLLY
Trigger: GTAAAGGAGGGGGCACCTGCATGTCTCCTGCAATGA...ATGCCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp AGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACGCATCGCTCCTTCAGGCAGCTaGCCAGTCAATCACCTGTGC +
Preference number: 4 (lower is better)
Translates to: RAECCPIYLIQSFMDQRIAPSGS*PVNHLC
Trigger: GCACAGGTGATTGACTGGCCAGCTGCCTGAAGGAGC...GATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp AAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGCATGACATCCGTATCCTCTaGCCAGTTACTGAGACACGG +
Preference number: 4 (lower is better)
Translates to: KAFGTVTFEWISAFWKGHDIRIL*PVTETR
Trigger: CCGTGTCTCAGTAACTGGCCAGAGGATACGGATGTC...ATGCCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp CTATTACTGCTACTAAACTTGTTCCGTCTTTACTTGCCCCCTCCCACCCACCACGATATTTTATCCGGGTaGAGCTTGTCATGGGAACAC +
Preference number: 4 (lower is better)
Translates to: LLLLLNLFRLYLPPPTHHDILSG*SLSWEH
Trigger: GTGTTCCCATGACAAGCTTCACCCGGATAAAATATC...GTGGTGGGTGGGAGGGGGCAAGTAAAGACGGAACAAGTTTAGTAGCAGTAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp AGAATGTCTGTTAAAACTGTTAGGTCACAAAGTATGCAAAGAAACAGAACAGGCATGGGCTTCGCCACCTaGCAGCAAGGAGGACCTGGC +
Preference number: 4 (lower is better)
Translates to: RMSVKTVRSQSMQRNRTGMGFAT*QQGGPG
Trigger: GCCAGGTCCTCCTTGCTGGCAGGTGGCGAAGCCCAT...GCCTGTTCTGTTTCTTTGCATACTTTGTGACCTAACAGTTTTAACAGACATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR GCA 90 bp CTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCGTCTCGATGTGCTCCTaGGACACCTCCTCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: LKLLFVQSRMLSHLLDTIVSMCS*DTSSGR
Trigger: GCGGCCCGAGGAGGTGTCGCAGGAGCACATCGAGAC...GATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp AGAATGTCTGTTAAAACTGTTAGGTCACAAAGTATGCAAAGAAACAGAACAGGCTGCACACGCCGCGAATaGAGGGCTCCAGCCAGATGC +
Preference number: 4 (lower is better)
Translates to: RMSVKTVRSQSMQRNRTGCTRRE*RAPARC
Trigger: GCATCTGGCTGGAGCCCTGCATTCGCGGCGTGTGCA...GCCTGTTCTGTTTCTTTGCATACTTTGTGACCTAACAGTTTTAACAGACATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR GCA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTCGTCCGAGGCGGTCTTaGCACGTCCTCACTGGCACT +
Preference number: 4 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGRPRRS*HVLTGT
Trigger: AGTGCCAGTGAGGACGTGGCAAGACCGCCTCGGACG...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CCA 90 bp AAAGGGATAAGCTGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAGCTCCTTCAGGCAGCTaGCCAGTCAATCACCTGTGC +
Preference number: 4 (lower is better)
Translates to: KGISWIMWDISKKSGVSRAPSGS*PVNHLC
Trigger: GCACAGGTGATTGACTGGCCAGCTGCCTGAAGGAGC...TCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CCA 90 bp TGCTCATTGCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACCTTTATGGACATAGATaGTGGCTTGAGTGTATTCAC +
Preference number: 4 (lower is better)
Translates to: CSLQETCRCPLLYPIPRDLYGHR*WLECIH
Trigger: GTGAATACACTCAAGCCACCATCTATGTCCATAAAG...GTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGCAATGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTGGCCCGCCCAGACTGTaGAGCGGGACCTGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGGPPRL*SGTCLE
Trigger: CTCTAAACAGGTCCCGCTCCACAGTCTGGGCGGGCC...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR TCA 90 bp AAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGCATGCATTTCGAGAGCAATaGGTTCCTTTGCCACACTTG +
Preference number: 4 (lower is better)
Translates to: KAFGTVTFEWISAFWKGHAFREQ*VPLPHL
Trigger: CAAGTGTGGCAAAGGAACTCATTGCTCTCGAAATGC...ATGCCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp CATAAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGCCTCTGGCCAGTTACTaGGACACGGTCTGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: HKAFGTVTFEWISAFWKGPLASY*DTVCFY
Trigger: ATAAAAACAGACCGTGTCTCAGTAACTGGCCAGAGG...CCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp AAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGCATCCTCTGGCCAGTTACTaGGACACGGTCTGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: KAFGTVTFEWISAFWKGHPLASY*DTVCFY
Trigger: ATAAAAACAGACCGTGTCTCAGTAACTGGCCAGAGG...ATGCCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp TGTCCATCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTAGGTCCCTCTGCTGCTaGCACAATAAGCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: CPSVQSALFDIRHLGQSRRSLCC*HNKPSL
Trigger: CAGAGAAGGCTTATTGTGTCAGCAGCAGAGGGACCT...ACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGATGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp CTATTACTGCTACTAAACTTGTTCCGTCTTTACTTGCCCCCTCCCACCCACCACGTTGTCCCATCTACTTaGTACAATCCTTTATGGACC +
Preference number: 4 (lower is better)
Translates to: LLLLLNLFRLYLPPPTHHVVPST*YNPLWT
Trigger: GGTCCATAAAGGATTGTATCAAGTAGATGGGACAAC...GTGGTGGGTGGGAGGGGGCAAGTAAAGACGGAACAAGTTTAGTAGCAGTAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp TCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAAGGGTGGCGCTGCAGCTaGCATGGAGAAGAGTCTAAA +
Preference number: 4 (lower is better)
Translates to: SFRAECCPIYLIQSFMDQGWRCS*HGEESK
Trigger: TTTAGACTCTTCTCCATGTCAGCTGCAGCGCCACCC...TTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp TGCTCATTGCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACAAAGCAAAAAGCCTCTaGAGTCAAAACATGAGACAT +
Preference number: 4 (lower is better)
Translates to: CSLQETCRCPLLYPIPRDKAKSL*SQNMRH
Trigger: ATGTCTCATGTTTTGACTTCAGAGGCTTTTTGCTTT...GTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGCAATGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp CATAAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGACGCAAAGCCCATTGTaGCCAGTTTTATACTCCCCA +
Preference number: 4 (lower is better)
Translates to: HKAFGTVTFEWISAFWKGTQSPL*PVLYSP
Trigger: TGGGGAGTATAAAACTGGTCACAATGGGCTTTGCGT...CCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS-3UTR TCA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTCCTAACCCGACGGGCTaGGGTAGAGGAAGCGTACGT +
Preference number: 4 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGPNPTG*GRGSVR
Trigger: ACGTACGCTTCCTCTACCTCAGCCCGTCGGGTTAGG...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR GCA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATATGGGCTTCGCCACCTaGCAGCAAGGAGGACCTGGC +
Preference number: 4 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYMGFAT*QQGGPG
Trigger: GCCAGGTCCTCCTTGCTGGCAGGTGGCGAAGCCCAT...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp ATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACGACTATAAGGGCTCCAGCCAGATaGGGTAAGCGGTCTCGATGT +
Preference number: 4 (lower is better)
Translates to: MKLEQGNITELYSPPTTIRAPAR*GKRSRC
Trigger: ACATCGAGACCGCTTACCGCATCTGGCTGGAGCCCT...TATAGTCGTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp ATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATTGTTCCGTCTTTACTTaGCCCCTCCCACCCACCACC +
Preference number: 4 (lower is better)
Translates to: IQSFMDQRIWYETRARKYCSVFT*PLPPTT
Trigger: GGTGGTGGGTGGGAGGGGGCAAGTAAAGACGGAACA...ATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp TGTCCATCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTCAGGAGACATGCAGGTaGCCCCTCCTTTACCCAATA +
Preference number: 4 (lower is better)
Translates to: CPSVQSALFDIRHLGQSRQETCR*PLLYPI
Trigger: TATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTG...ACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGATGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATCCAGCAAGGAGGACCTaGCGCTCCTTCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYPARRT*RSFRQL
Trigger: CAGCTGCCTGAAGGAGCGCCAGGTCCTCCTTGCTGG...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp TACTTGATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGGACATCCGTATCCTCTaGCCAGTTACTGAGACACGG +
Preference number: 4 (lower is better)
Translates to: YLIQSFMDQRIWYETRARDIRIL*PVTETR
Trigger: CCGTGTCTCAGTAACTGGCCAGAGGATACGGATGTC...CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp CATAAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGAGAAAGGCTGGAACTTaGACAGTAGTGTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: HKAFGTVTFEWISAFWKGRKAGT*TVVLGF
Trigger: AAAGCCCAACACTACTGTTCAAGTTCCAGCCTTTCT...CCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp CTATTACTGCTACTAAACTTGTTCCGTCTTTACTTGCCCCCTCCCACCCACCACAATATACTGTGTTTCTaGAGGGTTTACATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LLLLLNLFRLYLPPPTHHNILCF*RVYISH
Trigger: GTGGGAGATGTAAACCCTTCAGAAACACAGTATATT...GTGGTGGGTGGGAGGGGGCAAGTAAAGACGGAACAAGTTTAGTAGCAGTAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp AGAATGTCTGTTAAAACTGTTAGGTCACAAAGTATGCAAAGAAACAGAACAGGCAGGGCTCCAGCCAGATaGGGTAAGCGGTCTCGATGT +
Preference number: 4 (lower is better)
Translates to: RMSVKTVRSQSMQRNRTGRAPAR*GKRSRC
Trigger: ACATCGAGACCGCTTACCGCATCTGGCTGGAGCCCT...GCCTGTTCTGTTTCTTTGCATACTTTGTGACCTAACAGTTTTAACAGACATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR GCA 90 bp AAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGCATTCTGCATCACCATCTTaGTCATCCAGCTGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: KAFGTVTFEWISAFWKGHSASPS*SSSCSR
Trigger: TCTTGAACAGCTGGATGAGCAAGATGGTGATGCAGA...ATGCCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp CATAAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGTCCGTTGCTTTGTTCTaGATCACCATCTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: HKAFGTVTFEWISAFWKGSVALF*ITILLI
Trigger: GATGAGCAAGATGGTGATGCAGAACAAAGCAACGGA...CCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGGCTCCTTCAGGCAGCTaGCCAGTCAATCACCTGTGC +
Preference number: 4 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQAPSGS*PVNHLC
Trigger: GCACAGGTGATTGACTGGCCAGCTGCCTGAAGGAGC...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp ATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAACATGAGGCCCCCGTaGGGACACAAAAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: IQSFMDQRIWYETRARKYNMRPP*GHKRAL
Trigger: CAGTGCTCTTTTGTGTCCCCACGGGGGCCTCATGTT...ATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp ATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACGACTATAAACATGAGGCCCCCGTaGGGACACAAAAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: MKLEQGNITELYSPPTTINMRPP*GHKRAL
Trigger: CAGTGCTCTTTTGTGTCCCCACGGGGGCCTCATGTT...TATAGTCGTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp TGTCCATCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTGCATTTCGAGAGCAATaGGTTCCTTTGCCACACTTG +
Preference number: 4 (lower is better)
Translates to: CPSVQSALFDIRHLGQSRAFREQ*VPLPHL
Trigger: CAAGTGTGGCAAAGGAACTCATTGCTCTCGAAATGC...ACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGATGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp CATAAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGGTCAAAAGGAGCAACTaGAAATGCATGCATGATCTG +
Preference number: 4 (lower is better)
Translates to: HKAFGTVTFEWISAFWKGVKRSN*KCMHDL
Trigger: CAGATCATGCATGCATTTTCAGTTGCTCCTTTTGAC...CCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308271.14
CDS-3UTR TCA 90 bp TCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAAAAACCTCACCGACTATaGCCACACTTCAGAAGACGC +
Preference number: 4 (lower is better)
Translates to: SFRAECCPIYLIQSFMDQKPHRL*PHFRRR
Trigger: GCGTCTTCTGAAGTGTGGTCATAGTCGGTGAGGTTT...TTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS-3UTR TCA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACAGCACAGCAGAGCTTTaGTCAGGACACCCATGTTTG +
Preference number: 4 (lower is better)
Translates to: IWYETRARKYNRTLFPSHSTAEL*SGHPCL
Trigger: CAAACATGGGTGTCCTGATCAAAGCTCTGCTGTGCT...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS-3UTR GCA 90 bp AAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGCATATCGCTGCCCTTTACTaGTGCTTTCAGCAGATTATT +
Preference number: 4 (lower is better)
Translates to: KAFGTVTFEWISAFWKGHIAALY*CFQQII
Trigger: AATAATCTGCTGAAAGCAGCAGTAAAGGGCAGCGAT...ATGCCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp AAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGCATCGTTCATCTTTCCGTTaGTTTGTTCTGCATCACCAT +
Preference number: 4 (lower is better)
Translates to: KAFGTVTFEWISAFWKGHRSSFR*FVLHHH
Trigger: ATGGTGATGCAGAACAAAGCAACGGAAAGATGAACG...ATGCCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACGCCTTTGGAAAGTACTaGTGCAGTTTGCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: IWYETRARKYNRTLFPSHAFGKY*CSLLQA
Trigger: GGCTTGGAGCAAACTGCAGCAGTACTTTCCAAAGGC...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp CATAAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGACAATAAGCCTTCTCTaGATTCTGGACAGAGTTTGG +
Preference number: 4 (lower is better)
Translates to: HKAFGTVTFEWISAFWKGTISLL*ILDRVW
Trigger: CCAAACTCTGTCCAGAATGCAGAGAAGGCTTATTGT...CCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp ACCCCTTCAATATTCTTAAGAATATTGCTTCGGTTACGTGTTGCTAAGAATGATTGTTCCGTCTTTACTTaGCCCCTCCCACCCACCACC +
Preference number: 4 (lower is better)
Translates to: TPSIFLRILLRLRVAKNDCSVFT*PLPPTT
Trigger: GGTGGTGGGTGGGAGGGGGCAAGTAAAGACGGAACA...ATCATTCTTAGCAACACGTAACCGAAGCAATATTCTTAAGAATATTGAAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp AAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGCATCAAGTCATGCTCCATTaGTGCCTCACAAATAACACA +
Preference number: 4 (lower is better)
Translates to: KAFGTVTFEWISAFWKGHQVMLH*CLTNNT
Trigger: TGTGTTATTTGTGAGGCAGCAATGGAGCATGACTTG...ATGCCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS-3UTR CCA 90 bp CATAAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGAAACTCAGGAGCCTTTaGAAAGTACTGCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: HKAFGTVTFEWISAFWKGKLRSL*KVLLQF
Trigger: AAACTGCAGCAGTACTTTCCAAAGGCTCCTGAGTTT...CCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp AAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGCATTATGGACATAGATGGTaGCTTGAGTGTATTCACGCA +
Preference number: 4 (lower is better)
Translates to: KAFGTVTFEWISAFWKGHYGHRW*LECIHA
Trigger: TGCGTGAATACACTCAAGCCACCATCTATGTCCATA...ATGCCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTCCTCACTGGCACTTCTaGAAAAGCAGCGTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGPHWHF*KSSVSA
Trigger: GGCTGAGACGCTGCTTTTCCAGAAGTGCCAGTGAGG...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR TCA 90 bp AACCAACATATATGCATTTCGAGAGCAATGAGTTCCTTTGCCACACTTGGGTTTGCATTTCGAGAGCAATaGGTTCCTTTGCCACACTTG +
Preference number: 4 (lower is better)
Translates to: NQHICISRAMSSFATLGFAFREQ*VPLPHL
Trigger: CAAGTGTGGCAAAGGAACTCATTGCTCTCGAAATGC...AAACCCAAGTGTGGCAAAGGAACTCATTGCTCTCGAAATGCATATATGTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374730.2
CDS-3UTR TCA 90 bp AAAGGGATAAGCTGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAGCATTTCGAGAGCAATaGGTTCCTTTGCCACACTTG +
Preference number: 4 (lower is better)
Translates to: KGISWIMWDISKKSGVSRAFREQ*VPLPHL
Trigger: CAAGTGTGGCAAAGGAACTCATTGCTCTCGAAATGC...TCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR TCA 90 bp AGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACGCATCGATATTTTATCCGGGTaGAGCTTGTCATGGGAACAC +
Preference number: 4 (lower is better)
Translates to: RAECCPIYLIQSFMDQRIDILSG*SLSWEH
Trigger: GTGTTCCCATGACAAGCTTCACCCGGATAAAATATC...GATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACCCTCTGGCCAGTTACTaGGACACGGTCTGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: IWYETRARKYNRTLFPSHPLASY*DTVCFY
Trigger: ATAAAAACAGACCGTGTCTCAGTAACTGGCCAGAGG...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp TACTTGATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGCCAACGCATCTGGTATaGAACTCGAGCAAGGAAATA +
Preference number: 4 (lower is better)
Translates to: YLIQSFMDQRIWYETRARPTHLV*NSSKEI
Trigger: TATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGG...CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp AAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGCATAATGAGAAGCCAAACTaGAATAAACCTCACCGACTA +
Preference number: 4 (lower is better)
Translates to: KAFGTVTFEWISAFWKGHNEKPN*NKPHRL
Trigger: TAGTCGGTGAGGTTTATTTCAGTTTGGCTTCTCATT...ATGCCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS-3UTR GCA 90 bp AGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACGCATCAATTCGGATTTCCTTTaGAGTTTCGTCTGCACACGC +
Preference number: 4 (lower is better)
Translates to: RAECCPIYLIQSFMDQRINSDFL*SFVCTR
Trigger: GCGTGTGCAGACGAAACTGCAAAGGAAATCCGAATT...GATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp CATAAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGTTCTTATGTCCAGTTTaGCTGTCAAAGACAAAACGC +
Preference number: 4 (lower is better)
Translates to: HKAFGTVTFEWISAFWKGFLCPV*LSKTKR
Trigger: GCGTTTTGTCTTTGACAGGCAAACTGGACATAAGAA...CCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp CTCAAATTTGGAATTATCCCGATCTACCAGCTCTTGAAGAAAGGCTGGAACTTGTCTGTGTATGAGGACTaGGCTGAGTTCATACACGTA +
Preference number: 4 (lower is better)
Translates to: LKFGIIPIYQLLKKGWNLSVYED*AEFIHV
Trigger: TACGTGTATGAACTCAGCGCAGTCCTCATACACAGA...CAAGTTCCAGCCTTTCTTCAAGAGCTGGTAGATCGGGATAATTCCAAATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374730.2
CDS-3UTR GCA 90 bp CGGTTACGTGTTGCTAAGAATGATAATCCTGAGTTGGATGGACAGCACATCCATCCTTTATCCACACTTTaGTTACGCATCTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: RLRVAKNDNPELDGQHIHPLSTL*LRISAI
Trigger: AATGGCTGAGATGCGTAAGCAAAGTGTGGATAAAGG...ATGGATGTGCTGTCCATCCAACTCAGGATTATCATTCTTAGCAACACGTAACCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp GCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGCATGTAGGGAGAGAAGTCTTTTaGTCGTTTGCAATCATCTTA +
Preference number: 4 (lower is better)
Translates to: AFGTVTFEWISAFWKGHVGREVF*SFAIIL
Trigger: TAAGATGATTGCAAACGAGCAAAAGACTTCTCTCCC...TACATGCCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp CGGTTACGTGTTGCTAAGAATGATAATCCTGAGTTGGATGGACAGCACATCCATAGCTTTTGTATCATTTaGCACTCACTGGGCCATATG +
Preference number: 4 (lower is better)
Translates to: RLRVAKNDNPELDGQHIHSFCII*HSLGHM
Trigger: CATATGGCCCAGTGAGTGGCAAATGATACAAAAGCT...ATGGATGTGCTGTCCATCCAACTCAGGATTATCATTCTTAGCAACACGTAACCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp CTATTACTGCTACTAAACTTGTTCCGTCTTTACTTGCCCCCTCCCACCCACCACTTTTATTTTCAAACGTaGCAGGTACATTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: LLLLLNLFRLYLPPPTHHFYFQT*QVHFPL
Trigger: AAGTGGGAAATGTACCTGGCACGTTTGAAAATAAAA...GTGGTGGGTGGGAGGGGGCAAGTAAAGACGGAACAAGTTTAGTAGCAGTAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp TGTCCATCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTGTTGACTACAAGTCATaGTCCATTGCTGCCTCACAA +
Preference number: 4 (lower is better)
Translates to: CPSVQSALFDIRHLGQSRVDYKS*SIAASQ
Trigger: TTGTGAGGCAGCAATGGAGCATGACTTGTAGTCAAC...ACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGATGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS-3UTR CCA 90 bp CATAAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGTTCTCCTCTCACAGTTaGGATCATCGATGTTATGAA +
Preference number: 4 (lower is better)
Translates to: HKAFGTVTFEWISAFWKGFSSHS*DHRCYE
Trigger: TTCATAACATCGATGATCCCAACTGTGAGAGGAGAA...CCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACCCAGCAGGTAACCTTTaGTACAGCTCCTTAACCTCT +
Preference number: 4 (lower is better)
Translates to: IWYETRARKYNRTLFPSHPAGNL*YSSLTS
Trigger: AGAGGTTAAGGAGCTGTACCAAAGGTTACCTGCTGG...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp AAAGGGATAAGCTGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGACCAGCAGGTAACCTTTaGTACAGCTCCTTAACCTCT +
Preference number: 4 (lower is better)
Translates to: KGISWIMWDISKKSGVSRPAGNL*YSSLTS
Trigger: AGAGGTTAAGGAGCTGTACCAAAGGTTACCTGCTGG...TCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CCA 90 bp CTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCTGTTCAAGAGCTAGCTaGCGCCAACTCCGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: LKLLFVQSRMLSHLLDTICSRAS*RQLRKE
Trigger: CTCCTTGCGGAGTTGGCGCCAGCTAGCTCTTGAACA...GATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp CTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCAACATGAGGCCCCCGTaGGGACACAAAAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: LKLLFVQSRMLSHLLDTINMRPP*GHKRAL
Trigger: CAGTGCTCTTTTGTGTCCCCACGGGGGCCTCATGTT...GATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp TCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAAACTCCTCTTCCCCTCTaGTCATTTCTTAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: SFRAECCPIYLIQSFMDQTPLPL*SFLSSQ
Trigger: CTGACTGCTAAGAAATGACCAGAGGGGAAGAGGAGT...TTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp TCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAAATGGACCAACGCATCTaGTATGAAACTCGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: SFRAECCPIYLIQSFMDQMDQRI*YETRAR
Trigger: CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCAT...TTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp AGAATGTCTGTTAAAACTGTTAGGTCACAAAGTATGCAAAGAAACAGAACAGGCTTGCCACGTCCTCACTaGCACTTCTGGAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: RMSVKTVRSQSMQRNRTGLPRPH*HFWKSS
Trigger: GCTGCTTTTCCAGAAGTGCCAGTGAGGACGTGGCAA...GCCTGTTCTGTTTCTTTGCATACTTTGTGACCTAACAGTTTTAACAGACATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR TCA 90 bp TCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACCACAGAACTGCTGTTaGACAATATTGCGCACATCT +
Preference number: 4 (lower is better)
Translates to: SFRAECCPIYLIQSFMDQPQNCC*TILRTS
Trigger: AGATGTGCGCAATATTGTTCAACAGCAGTTCTGTGG...TTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp AAAGGGATAAGCTGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGACCACAGAACTGCTGTTaGACAATATTGCGCACATCT +
Preference number: 4 (lower is better)
Translates to: KGISWIMWDISKKSGVSRPQNCC*TILRTS
Trigger: AGATGTGCGCAATATTGTTCAACAGCAGTTCTGTGG...TCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR TCA 90 bp AGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACGCATCAGGTTTGGTAGGTGTTaGTTCATCCAACCACTTTTG +
Preference number: 4 (lower is better)
Translates to: RAECCPIYLIQSFMDQRIRFGRC*FIQPLL
Trigger: CAAAAGTGGTTGGATGAATCAACACCTACCAAACCT...GATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp AGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACGCATCGAACACAGGCAAGCGTaGTTATCAATAGGTTTGGTA +
Preference number: 4 (lower is better)
Translates to: RAECCPIYLIQSFMDQRIEHRQA*LSIGLV
Trigger: TACCAAACCTATTGATAATCACGCTTGCCTGTGTTC...GATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp TGTCCATCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTGAACACAGGCAAGCGTaGTTATCAATAGGTTTGGTA +
Preference number: 4 (lower is better)
Translates to: CPSVQSALFDIRHLGQSREHRQA*LSIGLV
Trigger: TACCAAACCTATTGATAATCACGCTTGCCTGTGTTC...ACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGATGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACGATATTTTATCCGGGTaGAGCTTGTCATGGGAACAC +
Preference number: 4 (lower is better)
Translates to: IWYETRARKYNRTLFPSHDILSG*SLSWEH
Trigger: GTGTTCCCATGACAAGCTTCACCCGGATAAAATATC...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp AGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACGCATCCATTTCCTTCAAGTCTaGTGTCCATCAGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: RAECCPIYLIQSFMDQRIHFLQV*CPSVQS
Trigger: AGATTGCACTGATGGACATCAGACTTGAAGGAAATG...GATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACCCAACGCATCTGGTATaGAACTCGAGCAAGGAAATA +
Preference number: 4 (lower is better)
Translates to: IWYETRARKYNRTLFPSHPTHLV*NSSKEI
Trigger: TATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGG...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp AAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGCATTCTGAAGTCAAAACATaGGACATAATTCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: KAFGTVTFEWISAFWKGHSEVKT*DIIPCS
Trigger: TGAGCAAGGAATTATGTCTCATGTTTTGACTTCAGA...ATGCCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp CATAAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGAAAGCAAAAAGCCTCTaGAGTCAAAACATGAGACAT +
Preference number: 4 (lower is better)
Translates to: HKAFGTVTFEWISAFWKGKAKSL*SQNMRH
Trigger: ATGTCTCATGTTTTGACTTCAGAGGCTTTTTGCTTT...CCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp ATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACGACTATACCTTCTGATGAGATCTaGGGGACAGATACTTCAACG +
Preference number: 4 (lower is better)
Translates to: MKLEQGNITELYSPPTTIPSDEI*GTDTST
Trigger: CGTTGAAGTATCTGTCCCTCAGATCTCATCAGAAGG...TATAGTCGTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS-3UTR GCA 90 bp AAACCAACATATATGCATTTCGAGAGCAATGAGTTCCTTTGCCACACTTGGGTTAGCAATGAGTTCCTTTaGCACACTTGGGTTTACGTG +
Preference number: 4 (lower is better)
Translates to: KPTYMHFESNEFLCHTWVSNEFL*HTWVYV
Trigger: CACGTAAACCCAAGTGTGGCAAAGGAACTCATTGCT...AACCCAAGTGTGGCAAAGGAACTCATTGCTCTCGAAATGCATATATGTTGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374730.2
CDS-3UTR GCA 90 bp AAAGGGATAAGCTGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAAGCAATGAGTTCCTTTaGCACACTTGGGTTTACGTG +
Preference number: 4 (lower is better)
Translates to: KGISWIMWDISKKSGVSRSNEFL*HTWVYV
Trigger: CACGTAAACCCAAGTGTGGCAAAGGAACTCATTGCT...TCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR GCA 90 bp TGTCCATCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTCGTTCATCTTTCCGTTaGTTTGTTCTGCATCACCAT +
Preference number: 4 (lower is better)
Translates to: CPSVQSALFDIRHLGQSRRSSFR*FVLHHH
Trigger: ATGGTGATGCAGAACAAAGCAACGGAAAGATGAACG...ACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGATGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp TACTTGATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGCGTTCATCTTTCCGTTaGTTTGTTCTGCATCACCAT +
Preference number: 4 (lower is better)
Translates to: YLIQSFMDQRIWYETRARRSSFR*FVLHHH
Trigger: ATGGTGATGCAGAACAAAGCAACGGAAAGATGAACG...CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp AAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGCATCTCTTTCTAAAATCTTaGACTGTGAACAGCACTCTT +
Preference number: 4 (lower is better)
Translates to: KAFGTVTFEWISAFWKGHLFLKS*TVNSTL
Trigger: AAGAGTGCTGTTCACAGTGCAAGATTTTAGAAAGAG...ATGCCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp TACTTGATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAGCTTTTGTATCATTTaGCACTCACTGGGCCATATG +
Preference number: 4 (lower is better)
Translates to: YLIQSFMDQRIWYETRARSFCII*HSLGHM
Trigger: CATATGGCCCAGTGAGTGGCAAATGATACAAAAGCT...CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp TACTTGATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGACAATAAGCCTTCTCTaGATTCTGGACAGAGTTTGG +
Preference number: 4 (lower is better)
Translates to: YLIQSFMDQRIWYETRARTISLL*ILDRVW
Trigger: CCAAACTCTGTCCAGAATGCAGAGAAGGCTTATTGT...CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp TGTCCATCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTAAAGCTCCAGTTAAGTaGCACTCCTATGAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: CPSVQSALFDIRHLGQSRKAPVK*HSYEFK
Trigger: CTTGAACTCATAGGAGTGGCACTTAACTGGAGCTTT...ACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGATGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS-3UTR CCA 90 bp GCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGCATGTAAAGGCAAACAAGTACTaGAGATGCTCACAAATTGTT +
Preference number: 4 (lower is better)
Translates to: AFGTVTFEWISAFWKGHVKANKY*RCSQIV
Trigger: AACAATTTGTGAGCATCTCCAGTACTTGTTTGCCTT...TACATGCCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp CGGTTACGTGTTGCTAAGAATGATAATCCTGAGTTGGATGGACAGCACATCCATATTCTGGACAGAGTTTaGGCTCAGAAATATACTGTG +
Preference number: 4 (lower is better)
Translates to: RLRVAKNDNPELDGQHIHILDRV*AQKYTV
Trigger: CACAGTATATTTCTGAGCCCAAACTCTGTCCAGAAT...ATGGATGTGCTGTCCATCCAACTCAGGATTATCATTCTTAGCAACACGTAACCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp TTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTCAAGGGTGCCTAGGGTaGCACAGTCATCACTTAAAA +
Preference number: 4 (lower is better)
Translates to: FMDQRIWYETRARKYNRTQGCLG*HSHHLK
Trigger: TTTTAAGTGATGACTGTGCCACCCTAGGCACCCTTG...AGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp TGTCCATCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTTGGATTTCTGCCTTTTaGAAGGGGCATGTAATGGTT +
Preference number: 4 (lower is better)
Translates to: CPSVQSALFDIRHLGQSRWISAF*KGHVMV
Trigger: AACCATTACATGCCCCTTCCAAAAGGCAGAAATCCA...ACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGATGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTGCCGAAGCTCCAAGTTaGGAAACCACACTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGAEAPS*ETTLEE
Trigger: TTCTTCAAGTGTGGTTTCTCAACTTGGAGCTTCGGC...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR TCA 90 bp TATAAACCAACATATATGCATTTCGAGAGCAATGAGTTCCTTTGCCACACTTGGAGAAAGGCTGGAACTTaGACAGTAGTGTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: YKPTYMHFESNEFLCHTWRKAGT*TVVLGF
Trigger: AAAGCCCAACACTACTGTTCAAGTTCCAGCCTTTCT...CCAAGTGTGGCAAAGGAACTCATTGCTCTCGAAATGCATATATGTTGGTTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374730.2
CDS-3UTR TCA 90 bp AGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACGCATCAATATACTGTGTTTCTaGAGGGTTTACATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: RAECCPIYLIQSFMDQRINILCF*RVYISH
Trigger: GTGGGAGATGTAAACCCTTCAGAAACACAGTATATT...GATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp ATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACGACTATATGGGACAGTCACGTTTaGATGGATTTCTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: MKLEQGNITELYSPPTTIWDSHV*MDFCLL
Trigger: CAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCA...TATAGTCGTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp TTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTCCAACGCATCTGGTATaGAACTCGAGCAAGGAAATA +
Preference number: 4 (lower is better)
Translates to: FMDQRIWYETRARKYNRTPTHLV*NSSKEI
Trigger: TATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGG...AGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp TGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACAATTCGGATTTCCTTTaGAGTTTCGTCTGCACACGC +
Preference number: 4 (lower is better)
Translates to: WIMWDISKKSGVSRKLFYNSDFL*SFVCTR
Trigger: GCGTGTGCAGACGAAACTGCAAAGGAAATCCGAATT...GTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR GCA 90 bp TACTTGATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGTGTAGTCACTACAAGTaGTTGGACATAAGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: YLIQSFMDQRIWYETRARCSHYK*LDISRV
Trigger: CACTCTACTTATGTCCAAGCACTTGTAGTGACTACA...CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp ATCCACACTTTGCTTACGCATCTCAGCCATTTCAATACACCACTCCTCAAATTTCCTTTATCCACACTTTaGTTACGCATCTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: IHTLLTHLSHFNTPLLKFPLSTL*LRISAI
Trigger: AATGGCTGAGATGCGTAAGCAAAGTGTGGATAAAGG...AAATTTGAGGAGTGGTGTATTGAAATGGCTGAGATGCGTAAGCAAAGTGTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374730.2
CDS-3UTR GCA 90 bp TCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTTTGAATTCATCCAACCACTTTTaGAGCCATTCCAGAGAGACA +
Preference number: 4 (lower is better)
Translates to: SVQSALFDIRHLGQSRLNSSNHF*SHSRET
Trigger: TGTCTCTCTGGAATGGCTGCAAAAGTGGTTGGATGA...ATTCAAACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp ATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATTCCGTTGCTTTGTTCTaGATCACCATCTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: IQSFMDQRIWYETRARKYSVALF*ITILLI
Trigger: GATGAGCAAGATGGTGATGCAGAACAAAGCAACGGA...ATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATGCCTTTGGAAAGTACTaGTGCAGTTTGCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: MSLKLLFVQSRMLSHLLDAFGKY*CSLLQA
Trigger: GGCTTGGAGCAAACTGCAGCAGTACTTTCCAAAGGC...ATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACAGCAGAAACGAGAAGTaGTTTCTCACCACGAACTTT +
Preference number: 4 (lower is better)
Translates to: IWYETRARKYNRTLFPSHSRNEK*FLTTNF
Trigger: AAAGTTCGTGGTGAGAAAGCACTTCTCGTTTCTGCT...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308271.14
CDS-3UTR GCA 90 bp AGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACGCATCCATTGCAGCATAATCTaGAATTGGTTCATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: RAECCPIYLIQSFMDQRIHCSII*NWFISL
Trigger: AAGGCTGATGAACCAATTGCAGATTATGCTGCAATG...GATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp TGTCCATCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTTCTGGCATACAAACTTaGATGACATCATCCATTGCA +
Preference number: 4 (lower is better)
Translates to: CPSVQSALFDIRHLGQSRSGIQT*MTSSIA
Trigger: TGCAATGGATGATGTCATGCAAGTTTGTATGCCAGA...ACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGATGGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp TTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTGTCATGCTCCATTGCTaGCTCACAAATAACACAACC +
Preference number: 4 (lower is better)
Translates to: FMDQRIWYETRARKYNRTVMLHC*LTNNTT
Trigger: GGTTGTGTTATTTGTGAGGCAGCAATGGAGCATGAC...AGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS-3UTR GCA 90 bp TACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGAGTTCAAGGAGCTGTaGACCATAATGCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: YFSFRAECCPIYLIQSFMEFKEL*TIMLSL
Trigger: CAGACTCAGCATTATGGTGCACAGCTCCTTGAACTC...CATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS-3UTR GCA 90 bp AAAGGGATAAGCTGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGATCGAAAGCTATTTCTTaGCTCCGGTACTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: KGISWIMWDISKKSGVSRSKAIS*LRYFPF
Trigger: AAAAGGGAAGTACCGGAGGCAAGAAATAGCTTTCGA...TCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CCA 90 bp ACTCCTCAAATTTGGAATTATCCCGATCTACCAGCTCTTGAAGAAAGGCTGGAACTCTTGAAGAAAGGCTaGAACTTGAACAGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: TPQIWNYPDLPALEERLELLKKG*NLNSSV
Trigger: AACACTACTGTTCAAGTTCCAGCCTTTCTTCAAGAG...TTCCAGCCTTTCTTCAAGAGCTGGTAGATCGGGATAATTCCAAATTTGAGGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374730.2
CDS-3UTR CCA 90 bp ATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACGACTATAGCACTCTTTGTAACTTaGAAACTCAGGAGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: MKLEQGNITELYSPPTTIALFVT*KLRSLW
Trigger: CCAAAGGCTCCTGAGTTTCCAAGTTACAAAGAGTGC...TATAGTCGTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp TACTTGATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGATTCTGGACAGAGTTTaGGCTCAGAAATATACTGTG +
Preference number: 4 (lower is better)
Translates to: YLIQSFMDQRIWYETRARILDRV*AQKYTV
Trigger: CACAGTATATTTCTGAGCCCAAACTCTGTCCAGAAT...CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp TACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGATGGACCAACGCATCTaGTATGAAACTCGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: YFSFRAECCPIYLIQSFMMDQRI*YETRAR
Trigger: CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCAT...CATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGCCGAAGCTCCAAGTTaGGAAACCACACTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYAEAPS*ETTLEE
Trigger: TTCTTCAAGTGTGGTTTCTCAACTTGGAGCTTCGGC...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp ATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGGCCGAAGCTCCAAGTTaGGAAACCACACTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: IGKQVMSLKLLFVQSRMLAEAPS*ETTLEE
Trigger: TTCTTCAAGTGTGGTTTCTCAACTTGGAGCTTCGGC...CAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp TTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTAGCTTTGAAAATTCTTaGGCATCCTGCTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: FMDQRIWYETRARKYNRTSFENS*ASCCCP
Trigger: TGGACAACAGCAGGATGCTCAAGAATTTTCAAAGCT...AGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGTTGGGTTTACGTGTCTaGGACTTAGAAGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQLGLRV*DLEGSA
Trigger: AGCAGAACCTTCTAAGTCTCAGACACGTAAACCCAA...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTTTGGGTTTACGTGTCTaGGACTTAGAAGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGLGLRV*DLEGSA
Trigger: AGCAGAACCTTCTAAGTCTCAGACACGTAAACCCAA...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR TCA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTAGAAAGGCTGGAACTTaGACAGTAGTGTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGRKAGT*TVVLGF
Trigger: AAAGCCCAACACTACTGTTCAAGTTCCAGCCTTTCT...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR TCA 90 bp ATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAGGTTTGGTAGGTGTTaGTTCATCCAACCACTTTTG +
Preference number: 4 (lower is better)
Translates to: IQSFMDQRIWYETRARKYRFGRC*FIQPLL
Trigger: CAAAAGTGGTTGGATGAATCAACACCTACCAAACCT...ATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp TTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTGCATACAAACTTGCATaGCATCATCCATTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: FMDQRIWYETRARKYNRTAYKLA*HHPLQH
Trigger: ATGCTGCAATGGATGATGTCATGCAAGTTTGTATGC...AGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp TCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTTTGAATGTTGTCCCATCTACTTaGTACAATCCTTTATGGACC +
Preference number: 4 (lower is better)
Translates to: SVQSALFDIRHLGQSRLNVVPST*YNPLWT
Trigger: GGTCCATAAAGGATTGTATCAAGTAGATGGGACAAC...ATTCAAACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp TATAAACCAACATATATGCATTTCGAGAGCAATGAGTTCCTTTGCCACACTTGGTTGGGTTTACGTGTCTaGGACTTAGAAGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: YKPTYMHFESNEFLCHTWLGLRV*DLEGSE
Trigger: TTCAGAACCTTCTAAGTCTCAGACACGTAAACCCAA...CCAAGTGTGGCAAAGGAACTCATTGCTCTCGAAATGCATATATGTTGGTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374730.2
CDS-3UTR TCA 90 bp TCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAAGACGCTTTTAACCACTaGACTTTCTTCATCCAAGAT +
Preference number: 4 (lower is better)
Translates to: SFRAECCPIYLIQSFMDQDAFNH*TFFIQD
Trigger: ATCTTGGATGAAGAAAGTTCAGTGGTTAAAAGCGTC...TTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS-3UTR TCA 90 bp CTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTGCACAGTGCCCTATaGGATCGGCTGGTATTATTA +
Preference number: 4 (lower is better)
Translates to: LKLLFVQSRMLSHLLDTILHSAL*DRLVLL
Trigger: TAATAATACCAGCCGATCTCATAGGGCACTGTGCAG...GATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS-3UTR GCA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAATTCGGATTTCCTTTaGAGTTTCGTCTGCACACGC +
Preference number: 4 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQNSDFL*SFVCTR
Trigger: GCGTGTGCAGACGAAACTGCAAAGGAAATCCGAATT...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp TCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAATGTAGTCACTACAAGTaGTTGGACATAAGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: SFRAECCPIYLIQSFMDQCSHYK*LDISRV
Trigger: CACTCTACTTATGTCCAAGCACTTGTAGTGACTACA...TTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp AAACCAACATATATGCATTTCGAGAGCAATGAGTTCCTTTGCCACACTTGGGTTTTCTTATGTCCAGTTTaGCTGTCAAAGACAAAACGC +
Preference number: 4 (lower is better)
Translates to: KPTYMHFESNEFLCHTWVFLCPV*LSKTKR
Trigger: GCGTTTTGTCTTTGACAGGCAAACTGGACATAAGAA...AACCCAAGTGTGGCAAAGGAACTCATTGCTCTCGAAATGCATATATGTTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374730.2
CDS-3UTR GCA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTTCTGTGTATGAGGACTaGGCTGAGTTCATACACGTA +
Preference number: 4 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGSVYED*AEFIHV
Trigger: TACGTGTATGAACTCAGCGCAGTCCTCATACACAGA...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR GCA 90 bp TCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTTTGAATTCTTCAGACGCAATATaGGACAACGTTCTACTACAC +
Preference number: 4 (lower is better)
Translates to: SVQSALFDIRHLGQSRLNSSDAI*DNVLLH
Trigger: GTGTAGTAGAACGTTGTCGCATATTGCGTCTGAAGA...ATTCAAACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp ATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACGACTATAGCTGCCCTTTACTGCTaGTTTCAGCAGATTATTAAC +
Preference number: 4 (lower is better)
Translates to: MKLEQGNITELYSPPTTIAALYC*FQQIIN
Trigger: GTTAATAATCTGCTGAAAGCAGCAGTAAAGGGCAGC...TATAGTCGTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGTCCGTTGCTTTGTTCTaGATCACCATCTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQSVALF*ITILLI
Trigger: GATGAGCAAGATGGTGATGCAGAACAAAGCAACGGA...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp TACTTGATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGCTCTTTCTAAAATCTTaGACTGTGAACAGCACTCTT +
Preference number: 4 (lower is better)
Translates to: YLIQSFMDQRIWYETRARLFLKS*TVNSTL
Trigger: AAGAGTGCTGTTCACAGTGCAAGATTTTAGAAAGAG...CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp TCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAAGGGAGAGAAGTCTTTTaGTCGTTTGCAATCATCTTA +
Preference number: 4 (lower is better)
Translates to: SFRAECCPIYLIQSFMDQGREVF*SFAIIL
Trigger: TAAGATGATTGCAAACGAGCAAAAGACTTCTCTCCC...TTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp ATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACGACTATAAGCTTTTGTATCATTTaGCACTCACTGGGCCATATG +
Preference number: 4 (lower is better)
Translates to: MKLEQGNITELYSPPTTISFCII*HSLGHM
Trigger: CATATGGCCCAGTGAGTGGCAAATGATACAAAAGCT...TATAGTCGTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp TTTTCCTTTATCCACACTTTGCTTACGCATCTCAGCCATTTCAATACACCACTCACCACTCCTCAAATTTaGAATTATCCCGATCTACCA +
Preference number: 4 (lower is better)
Translates to: FSFIHTLLTHLSHFNTPLTTPQI*NYPDLP
Trigger: TGGTAGATCGGGATAATTCCAAATTTGAGGAGTGGT...GAGTGGTGTATTGAAATGGCTGAGATGCGTAAGCAAAGTGTGGATAAAGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374730.2
CDS-3UTR CCA 90 bp ATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGCCAGCAGGTAACCTTTaGTACAGCTCCTTAACCTCT +
Preference number: 4 (lower is better)
Translates to: IGKQVMSLKLLFVQSRMLPAGNL*YSSLTS
Trigger: AGAGGTTAAGGAGCTGTACCAAAGGTTACCTGCTGG...CAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp TTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTAAACTCAGGAGCCTTTaGAAAGTACTGCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: FMDQRIWYETRARKYNRTKLRSL*KVLLQF
Trigger: AAACTGCAGCAGTACTTTCCAAAGGCTCCTGAGTTT...AGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGGCACTCTTTGTAACTTaGAAACTCAGGAGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQALFVT*KLRSLW
Trigger: CCAAAGGCTCCTGAGTTTCCAAGTTACAAAGAGTGC...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACATTCTGGACAGAGTTTaGGCTCAGAAATATACTGTG +
Preference number: 4 (lower is better)
Translates to: IWYETRARKYNRTLFPSHILDRV*AQKYTV
Trigger: CACAGTATATTTCTGAGCCCAAACTCTGTCCAGAAT...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp TCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTTTGAATTATGGACATAGATGGTaGCTTGAGTGTATTCACGCA +
Preference number: 4 (lower is better)
Translates to: SVQSALFDIRHLGQSRLNYGHRW*LECIHA
Trigger: TGCGTGAATACACTCAAGCCACCATCTATGTCCATA...ATTCAAACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp CGGTTACGTGTTGCTAAGAATGATAATCCTGAGTTGGATGGACAGCACATCCATTCAATTGACAAATTCTaGTCAAAAGGAGCAACTGAA +
Preference number: 4 (lower is better)
Translates to: RLRVAKNDNPELDGQHIHSIDKF*SKGATE
Trigger: TTCAGTTGCTCCTTTTGACCAGAATTTGTCAATTGA...ATGGATGTGCTGTCCATCCAACTCAGGATTATCATTCTTAGCAACACGTAACCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp CTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCAAGGGTGCCTAGGGTaGCACAGTCATCACTTAAAA +
Preference number: 4 (lower is better)
Translates to: LKLLFVQSRMLSHLLDTIQGCLG*HSHHLK
Trigger: TTTTAAGTGATGACTGTGCCACCCTAGGCACCCTTG...GATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATCAAGGGTGCCTAGGGTaGCACAGTCATCACTTAAAA +
Preference number: 4 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYQGCLG*HSHHLK
Trigger: TTTTAAGTGATGACTGTGCCACCCTAGGCACCCTTG...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp ATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGACTCCTCTTCCCCTCTaGTCATTTCTTAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: IGKQVMSLKLLFVQSRMLTPLPL*SFLSSQ
Trigger: CTGACTGCTAAGAAATGACCAGAGGGGAAGAGGAGT...CAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR CAA 72 bp CCATCAGTGCAATCTGCTTTATTTGACATAAGGCATTaGGGACAGTCACGTTTGAATGGATTTCTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: PSVQSALFDIRH*GQSRLNGFLPF
Trigger: AAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR CAA 72 bp TACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTaGATACAATCCTTTATGGACCAACGCATCTGGTAT +
Preference number: 4 (lower is better)
Translates to: YFSFRAECCPIY*IQSFMDQRIWY
Trigger: ATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGGGCTTTAACAAATCCTaGTGGATCAATGTATCGCCT +
Preference number: 4 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQGFNKS*WINVSP
Trigger: AGGCGATACATTGATCCATCAGGATTTGTTAAAGCC...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAGCTTTGAAAATTCTTaGGCATCCTGCTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQSFENS*ASCCCP
Trigger: TGGACAACAGCAGGATGCTCAAGAATTTTCAAAGCT...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp AGAATGTCTGTTAAAACTGTTAGGTCACAAAGTATGCAAAGAAACAGAACAGGCAGCTTTGAAAATTCTTaGGCATCCTGCTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: RMSVKTVRSQSMQRNRTGSFENS*ASCCCP
Trigger: TGGACAACAGCAGGATGCTCAAGAATTTTCAAAGCT...GCCTGTTCTGTTTCTTTGCATACTTTGTGACCTAACAGTTTTAACAGACATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR TCA 90 bp ACCCCTTCAATATTCTTAAGAATATTGCTTCGGTTACGTGTTGCTAAGAATGATCCACAGAACTGCTGTTaGACAATATTGCGCACATCT +
Preference number: 4 (lower is better)
Translates to: TPSIFLRILLRLRVAKNDPQNCC*TILRTS
Trigger: AGATGTGCGCAATATTGTTCAACAGCAGTTCTGTGG...ATCATTCTTAGCAACACGTAACCGAAGCAATATTCTTAAGAATATTGAAGGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATTTGGGTTTACGTGTCTaGGACTTAGAAGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYLGLRV*DLEGSA
Trigger: AGCAGAACCTTCTAAGTCTCAGACACGTAAACCCAA...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp CTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCAGAAAGGCTGGAACTTaGACAGTAGTGTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LKLLFVQSRMLSHLLDTIRKAGT*TVVLGF
Trigger: AAAGCCCAACACTACTGTTCAAGTTCCAGCCTTTCT...GATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGGCATACAAACTTGCATaGCATCATCCATTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQAYKLA*HHPLQH
Trigger: ATGCTGCAATGGATGATGTCATGCAAGTTTGTATGC...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp TACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGCATACAAACTTGCATaGCATCATCCATTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: YFSFRAECCPIYLIQSFMAYKLA*HHPLQH
Trigger: ATGCTGCAATGGATGATGTCATGCAAGTTTGTATGC...CATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp ATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTGGGACAGTCACGTTTaGATGGATTTCTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: IGKQVMSLKLLFVQSRMLWDSHV*MDFCLL
Trigger: CAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCA...CAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACTCTGAAGTCAAAACATaGGACATAATTCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: IWYETRARKYNRTLFPSHSEVKT*DIIPCS
Trigger: TGAGCAAGGAATTATGTCTCATGTTTTGACTTCAGA...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp ATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGAAACTCATAGGGCTCTaGGAAAGCAAGCATCGGAAA +
Preference number: 4 (lower is better)
Translates to: IGKQVMSLKLLFVQSRMLKLIGL*ESKHRK
Trigger: TTTCCGATGCTTGCTTTCTCAGAGCCCTATGAGTTT...CAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS-3UTR TCA 90 bp ATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATGTCAAAAGGAGCAACTaGAAATGCATGCATGATTTG +
Preference number: 4 (lower is better)
Translates to: IQSFMDQRIWYETRARKYVKRSN*KCMHDL
Trigger: CAAATCATGCATGCATTTTCAGTTGCTCCTTTTGAC...ATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp TGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTTCTTATGTCCAGTTTaGCTGTCAAAGACAAAACGC +
Preference number: 4 (lower is better)
Translates to: WIMWDISKKSGVSRKLFYFLCPV*LSKTKR
Trigger: GCGTTTTGTCTTTGACAGGCAAACTGGACATAAGAA...GTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR GCA 90 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATTCTGTGTATGAGGACTaGGCTGAGTTCATACACGTA +
Preference number: 4 (lower is better)
Translates to: MSLKLLFVQSRMLSHLLDSVYED*AEFIHV
Trigger: TACGTGTATGAACTCAGCGCAGTCCTCATACACAGA...ATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATAGCAATGAGTTCCTTTaGCACACTTGGGTTTACGTG +
Preference number: 4 (lower is better)
Translates to: MSLKLLFVQSRMLSHLLDSNEFL*HTWVYV
Trigger: CACGTAAACCCAAGTGTGGCAAAGGAACTCATTGCT...ATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp ACCCCTTCAATATTCTTAAGAATATTGCTTCGGTTACGTGTTGCTAAGAATGATAGCAATGAGTTCCTTTaGCACACTTGGGTTTACGTG +
Preference number: 4 (lower is better)
Translates to: TPSIFLRILLRLRVAKNDSNEFL*HTWVYV
Trigger: CACGTAAACCCAAGTGTGGCAAAGGAACTCATTGCT...ATCATTCTTAGCAACACGTAACCGAAGCAATATTCTTAAGAATATTGAAGGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTCCTTTATCCACACTTTaGTTACGCATCTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGPLSTL*LRISAI
Trigger: AATGGCTGAGATGCGTAAGCAAAGTGTGGATAAAGG...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR GCA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATTCATCCAACCACTTTTaGAGCCATTCCAGAGAGACA +
Preference number: 4 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYSSNHF*SHSRET
Trigger: TGTCTCTCTGGAATGGCTGCAAAAGTGGTTGGATGA...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGTCTTCAGACGCAATATaGGACAACGTTCTACTACAC +
Preference number: 4 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQSSDAI*DNVLLH
Trigger: GTGTAGTAGAACGTTGTCGCATATTGCGTCTGAAGA...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp TACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGCTGCCCTTTACTGCTaGTTTCAGCAGATTATTAAC +
Preference number: 4 (lower is better)
Translates to: YFSFRAECCPIYLIQSFMAALYC*FQQIIN
Trigger: GTTAATAATCTGCTGAAAGCAGCAGTAAAGGGCAGC...CATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp ATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCTGCATCACCATCTTaGTCATCCAGCTGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: IGKQVMSLKLLFVQSRMLSASPS*SSSCSR
Trigger: TCTTGAACAGCTGGATGAGCAAGATGGTGATGCAGA...CAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATTCTGCATCACCATCTTaGTCATCCAGCTGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: MSLKLLFVQSRMLSHLLDSASPS*SSSCSR
Trigger: TCTTGAACAGCTGGATGAGCAAGATGGTGATGCAGA...ATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp ATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACGACTATATCTGGCATACAAACTTaGATGACATCATCCATTGCA +
Preference number: 4 (lower is better)
Translates to: MKLEQGNITELYSPPTTISGIQT*MTSSIA
Trigger: TGCAATGGATGATGTCATGCAAGTTTGTATGCCAGA...TATAGTCGTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp ATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACGACTATAATCGCCCTTTACTGCTaGTTTCAGCAGATTATTAAC +
Preference number: 4 (lower is better)
Translates to: MKLEQGNITELYSPPTTIIALYC*FQQIIN
Trigger: GTTAATAATCTGCTGAAAGCAGCAGTAAAGGGCGAT...TATAGTCGTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS-3UTR GCA 90 bp AAAGGGATAAGCTGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAACAGAACAGGCAAGTTaGTTTTTCCATAGTAATCCA +
Preference number: 4 (lower is better)
Translates to: KGISWIMWDISKKSGVSRTEQAS*FFHSNP
Trigger: TGGATTACTATGGAAAAAGCAACTTGCCTGTTCTGT...TCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CCA 90 bp TGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTTCTCCTCTCACAGTTaGGATCATCGATGTTATGAA +
Preference number: 4 (lower is better)
Translates to: WIMWDISKKSGVSRKLFYFSSHS*DHRCYE
Trigger: TTCATAACATCGATGATCCCAACTGTGAGAGGAGAA...GTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CCA 90 bp AAAGGGATAAGCTGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAAAGGCAAACAAGTACTaGAGATGCTCACAAATTGTT +
Preference number: 4 (lower is better)
Translates to: KGISWIMWDISKKSGVSRKANKY*RCSQIV
Trigger: AACAATTTGTGAGCATCTCCAGTACTTGTTTGCCTT...TCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CCA 90 bp TGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACAACTGTTTGTGGCCTTaGATATTTAACTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: WIMWDISKKSGVSRKLFYNCLWP*IFNSSS
Trigger: TGAGCTGGAGTTAAATATCCAAGGCCACAAACAGTT...GTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CCA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACTCTGTTAACTGTTTGTaGCCTTGGATATTTAACTCC +
Preference number: 4 (lower is better)
Translates to: IWYETRARKYNRTLFPSHSVNCL*PWIFNS
Trigger: GGAGTTAAATATCCAAGGCCACAAACAGTTAACAGA...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp CTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCGCACTCTTTGTAACTTaGAAACTCAGGAGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: LKLLFVQSRMLSHLLDTIALFVT*KLRSLW
Trigger: CCAAAGGCTCCTGAGTTTCCAAGTTACAAAGAGTGC...GATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp TACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGTATGGACATAGATGGTaGCTTGAGTGTATTCACGCA +
Preference number: 4 (lower is better)
Translates to: YFSFRAECCPIYLIQSFMYGHRW*LECIHA
Trigger: TGCGTGAATACACTCAAGCCACCATCTATGTCCATA...CATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp TACTTGATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGTCAATTGACAAATTCTaGTCAAAAGGAGCAACTGAA +
Preference number: 4 (lower is better)
Translates to: YLIQSFMDQRIWYETRARSIDKF*SKGATE
Trigger: TTCAGTTGCTCCTTTTGACCAGAATTTGTCAATTGA...CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACTTTAAACCCTTCTTCTaGCATACAAACTTGCATGAC +
Preference number: 4 (lower is better)
Translates to: IWYETRARKYNRTLFPSHFKPFF*HTNLHD
Trigger: GTCATGCAAGTTTGTATGCCAGAAGAAGGGTTTAAA...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATAGGTTTGGTAGGTGTTaGTTCATCCAACCACTTTTG +
Preference number: 4 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYRFGRC*FIQPLL
Trigger: CAAAAGTGGTTGGATGAATCAACACCTACCAAACCT...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGAACACAGGCAAGCGTaGTTATCAATAGGTTTGGTA +
Preference number: 4 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYEHRQA*LSIGLV
Trigger: TACCAAACCTATTGATAATCACGCTTGCCTGTGTTC...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp TACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGAATATACTGTGTTTCTaGAGGGTTTACATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: YFSFRAECCPIYLIQSFMNILCF*RVYISH
Trigger: GTGGGAGATGTAAACCCTTCAGAAACACAGTATATT...CATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR TCA 90 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATCATTTCCTTCAAGTCTaGTGTCCATCAGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: MSLKLLFVQSRMLSHLLDHFLQV*CPSVQS
Trigger: AGATTGCACTGATGGACATCAGACTTGAAGGAAATG...ATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTTGTAGTCACTACAAGTaGTTGGACATAAGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGCSHYK*LDISRV
Trigger: CACTCTACTTATGTCCAAGCACTTGTAGTGACTACA...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR GCA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATTCTTCAGACGCAATATaGGACAACGTTCTACTACAC +
Preference number: 4 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYSSDAI*DNVLLH
Trigger: GTGTAGTAGAACGTTGTCGCATATTGCGTCTGAAGA...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp ACCCCTTCAATATTCTTAAGAATATTGCTTCGGTTACGTGTTGCTAAGAATGATATCGCTGCCCTTTACTaGTGCTTTCAGCAGATTATT +
Preference number: 4 (lower is better)
Translates to: TPSIFLRILLRLRVAKNDIAALY*CFQQII
Trigger: AATAATCTGCTGAAAGCAGCAGTAAAGGGCAGCGAT...ATCATTCTTAGCAACACGTAACCGAAGCAATATTCTTAAGAATATTGAAGGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACTTTCATTTTCAGATATaGATAACTCACCATGTGGAC +
Preference number: 4 (lower is better)
Translates to: IWYETRARKYNRTLFPSHFHFQI*ITHHVD
Trigger: GTCCACATGGTGAGTTATGCATATCTGAAAATGAAA...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp TCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTTTGAATCTCTTTCTAAAATCTTaGACTGTGAACAGCACTCTT +
Preference number: 4 (lower is better)
Translates to: SVQSALFDIRHLGQSRLNLFLKS*TVNSTL
Trigger: AAGAGTGCTGTTCACAGTGCAAGATTTTAGAAAGAG...ATTCAAACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGGGGAGAGAAGTCTTTTaGTCGTTTGCAATCATCTTA +
Preference number: 4 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQGREVF*SFAIIL
Trigger: TAAGATGATTGCAAACGAGCAAAAGACTTCTCTCCC...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp CTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCACAATAAGCCTTCTCTaGATTCTGGACAGAGTTTGG +
Preference number: 4 (lower is better)
Translates to: LKLLFVQSRMLSHLLDTITISLL*ILDRVW
Trigger: CCAAACTCTGTCCAGAATGCAGAGAAGGCTTATTGT...GATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp ATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATTCTGATGTCCATCAGTaGAATCTGCTTTATTTGACA +
Preference number: 4 (lower is better)
Translates to: IQSFMDQRIWYETRARKYSDVHQ*NLLYLT
Trigger: TGTCAAATAAAGCAGATTGCACTGATGGACATCAGA...ATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTACTCTAACAAACCAGTaGCTCGAAAGCTATTTCTTG +
Preference number: 4 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGTLTNQ*LESYFL
Trigger: CAAGAAATAGCTTTCGAGGCACTGGTTTGTTAGAGT...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR GCA 90 bp TGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTTAGGTCACAAAGTATaGAAAGAAACAGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: WIMWDISKKSGVSRKLFYLGHKV*KETEQA
Trigger: TGCCTGTTCTGTTTCTTTGCATACTTTGTGACCTAA...GTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CCA 90 bp ATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAAGGCAAACAAGTACTaGAGATGCTCACAAATTGTT +
Preference number: 4 (lower is better)
Translates to: IQSFMDQRIWYETRARKYKANKY*RCSQIV
Trigger: AACAATTTGTGAGCATCTCCAGTACTTGTTTGCCTT...ATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp AGAATGTCTGTTAAAACTGTTAGGTCACAAAGTATGCAAAGAAACAGAACAGGCCTCTTGAAGAAAGGCTaGAACTTGAACAGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: RMSVKTVRSQSMQRNRTGLLKKG*NLNSSV
Trigger: AACACTACTGTTCAAGTTCCAGCCTTTCTTCAAGAG...GCCTGTTCTGTTTCTTTGCATACTTTGTGACCTAACAGTTTTAACAGACATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CCA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGACCACTCCTCAAATTTaGAATTATCCCGATCTACCA +
Preference number: 4 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQTTPQI*NYPDLP
Trigger: TGGTAGATCGGGATAATTCCAAATTTGAGGAGTGGT...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTACCACTCCTCAAATTTaGAATTATCCCGATCTACCA +
Preference number: 4 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGTTPQI*NYPDLP
Trigger: TGGTAGATCGGGATAATTCCAAATTTGAGGAGTGGT...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CCA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATAAACTCAGGAGCCTTTaGAAAGTACTGCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYKLRSL*KVLLQF
Trigger: AAACTGCAGCAGTACTTTCCAAAGGCTCCTGAGTTT...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp TACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGCTTTATGGACATAGATaGTGGCTTGAGTGTATTCAC +
Preference number: 4 (lower is better)
Translates to: YFSFRAECCPIYLIQSFMLYGHR*WLECIH
Trigger: GTGAATACACTCAAGCCACCATCTATGTCCATAAAG...CATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATTGGATTTCTGCCTTTTaGAAGGGGCATGTAATGGTT +
Preference number: 4 (lower is better)
Translates to: MSLKLLFVQSRMLSHLLDWISAF*KGHVMV
Trigger: AACCATTACATGCCCCTTCCAAAAGGCAGAAATCCA...ATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATTGGATTTCTGCCTTTTaGAAGGGGCATGTAATGGTT +
Preference number: 4 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYWISAF*KGHVMV
Trigger: AACCATTACATGCCCCTTCCAAAAGGCAGAAATCCA...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTCAAAGAAACCAGTGTTaGCTCTTTAGAGGGAGATTT +
Preference number: 4 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGQRNQC*LFRGRF
Trigger: AAATCTCCCTCTAAAGAGCCAACACTGGTTTCTTTG...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CCA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTTATCTACAATACTCATaGATGCAGAGTGCTGACCTA +
Preference number: 4 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGYLQYS*MQSADL
Trigger: TAGGTCAGCACTCTGCATCCATGAGTATTGTAGATA...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CCA 90 bp AAAGGGATAAGCTGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAAGAAAAGGGATAAGCTaGATTATGTGGGATATTTCT +
Preference number: 4 (lower is better)
Translates to: KGISWIMWDISKKSGVSRRKGIS*IMWDIS
Trigger: AGAAATATCCCACATAATCCAGCTTATCCCTTTTCT...TCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
3UTR CAA 72 bp AAAGGCTGGAACTTGAACAGTAGTGTTGGGCTTTTCTaGAGTTTGCAGTCTATAAACCAACATATATGCATT +
Preference number: 4 (lower is better)
Translates to: KGWNLNSSVGLF*SLQSINQHICI
Trigger: AATGCATATATGTTGGTTTATAGACTGCAAACTCAAGAAAAGCCCAACACTACTGTTCAAGTTCCAGCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374730.2
CDS-3UTR TCA 90 bp ATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGGTTCTCCATCCTTTCTaGAATGCACCAAAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: IGKQVMSLKLLFVQSRMLVLHPF*NAPKQK
Trigger: TTTTTGCTTTGGTGCATTTCAGAAAGGATGGAGAAC...CAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATCATTGCAGCATAATCTaGAATTGGTTCATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: MSLKLLFVQSRMLSHLLDHCSII*NWFISL
Trigger: AAGGCTGATGAACCAATTGCAGATTATGCTGCAATG...ATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATAACTGTTTGTGGCCTTaGATATTTAACTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: MSLKLLFVQSRMLSHLLDNCLWP*IFNSSS
Trigger: TGAGCTGGAGTTAAATATCCAAGGCCACAAACAGTT...ATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATAACTGTTTGTGGCCTTaGATATTTAACTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYNCLWP*IFNSSS
Trigger: TGAGCTGGAGTTAAATATCCAAGGCCACAAACAGTT...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTTCTGTTAACTGTTTGTaGCCTTGGATATTTAACTCC +
Preference number: 4 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGSVNCL*PWIFNS
Trigger: GGAGTTAAATATCCAAGGCCACAAACAGTTAACAGA...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CCA 90 bp CTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTCTTGAAGAAAGGCTaGAACTTGAACAGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: LKLLFVQSRMLSHLLDTILLKKG*NLNSSV
Trigger: AACACTACTGTTCAAGTTCCAGCCTTTCTTCAAGAG...GATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp ACCCCTTCAATATTCTTAAGAATATTGCTTCGGTTACGTGTTGCTAAGAATGATCTCTTGAAGAAAGGCTaGAACTTGAACAGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: TPSIFLRILLRLRVAKNDLLKKG*NLNSSV
Trigger: AACACTACTGTTCAAGTTCCAGCCTTTCTTCAAGAG...ATCATTCTTAGCAACACGTAACCGAAGCAATATTCTTAAGAATATTGAAGGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp ACCCCTTCAATATTCTTAAGAATATTGCTTCGGTTACGTGTTGCTAAGAATGATACCACTCCTCAAATTTaGAATTATCCCGATCTACCA +
Preference number: 4 (lower is better)
Translates to: TPSIFLRILLRLRVAKNDTTPQI*NYPDLP
Trigger: TGGTAGATCGGGATAATTCCAAATTTGAGGAGTGGT...ATCATTCTTAGCAACACGTAACCGAAGCAATATTCTTAAGAATATTGAAGGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR TCA 90 bp CTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCTACATTTCCCACTTTTaGATAACAGCAAAACCGGAA +
Preference number: 4 (lower is better)
Translates to: LKLLFVQSRMLSHLLDTIYISHF*ITAKPE
Trigger: TTCCGGTTTTGCTGTTATTCAAAAGTGGGAAATGTA...GATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR GCA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATTCTGATGTCCATCAGTaGAATCTGCTTTATTTGACA +
Preference number: 4 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYSDVHQ*NLLYLT
Trigger: TGTCAAATAAAGCAGATTGCACTGATGGACATCAGA...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp ATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCTGTTAACTGTTTGTaGCCTTGGATATTTAACTCC +
Preference number: 4 (lower is better)
Translates to: IGKQVMSLKLLFVQSRMLSVNCL*PWIFNS
Trigger: GGAGTTAAATATCCAAGGCCACAAACAGTTAACAGA...CAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CCA 90 bp TACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGTCAATTGACAAATTCTaGTCAAAAGGAGCAACTGAA +
Preference number: 4 (lower is better)
Translates to: YFSFRAECCPIYLIQSFMSIDKF*SKGATE
Trigger: TTCAGTTGCTCCTTTTGACCAGAATTTGTCAATTGA...CATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATTTTAAACCCTTCTTCTaGCATACAAACTTGCATGAC +
Preference number: 4 (lower is better)
Translates to: MSLKLLFVQSRMLSHLLDFKPFF*HTNLHD
Trigger: GTCATGCAAGTTTGTATGCCAGAAGAAGGGTTTAAA...ATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CCA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATTTTAAACCCTTCTTCTaGCATACAAACTTGCATGAC +
Preference number: 4 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYFKPFF*HTNLHD
Trigger: GTCATGCAAGTTTGTATGCCAGAAGAAGGGTTTAAA...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
3UTR CAA 72 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTaGTCCCATCTACTTGATACAATCCTTTATGGACCA +
Preference number: 4 (lower is better)
Translates to: MSLKLLFVQSRM*SHLLDTILYGP
Trigger: TGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATTTTCATTTTCAGATATaGATAACTCACCATGTGGAC +
Preference number: 4 (lower is better)
Translates to: MSLKLLFVQSRMLSHLLDFHFQI*ITHHVD
Trigger: GTCCACATGGTGAGTTATGCATATCTGAAAATGAAA...ATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp CTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCTTTCATTTTCAGATATaGATAACTCACCATGTGGAC +
Preference number: 4 (lower is better)
Translates to: LKLLFVQSRMLSHLLDTIFHFQI*ITHHVD
Trigger: GTCCACATGGTGAGTTATGCATATCTGAAAATGAAA...GATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR GCA 90 bp ACCCCTTCAATATTCTTAAGAATATTGCTTCGGTTACGTGTTGCTAAGAATGATTTTTATTTTCAAACGTaGCAGGTACATTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: TPSIFLRILLRLRVAKNDFYFQT*QVHFPL
Trigger: AAGTGGGAAATGTACCTGGCACGTTTGAAAATAAAA...ATCATTCTTAGCAACACGTAACCGAAGCAATATTCTTAAGAATATTGAAGGGGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS GCA 90 bp GGAGGACCTGGCGCTCCTTCAGGCAGCTGGCCAGTCAATCACCTGTaGGCGCCACTGCCGCCGCGCCCGCCCGCGCCCGACCCGCACGAC +
Preference number: 5 (lower is better)
Translates to: GGPGAPSGSWPVNHL*APLPPRPPAPDPHD
Trigger: GTCGTGCGGGTCGGGCGCGGGCGGGCGCGGCGGCAGTGGCGCGCACAGGTGATTGACTGGCCAGCTGCCTGAAGGAGCGCCAGGTCCTCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
ENST00000532737.1
CDS GCA 90 bp GCGCTCCTTCAGGCAGCTGGCCAGTCAATCACCTGTGCGCGCCACTaGCGCCGCGCCCGCCCGCGCCCGACCCGCACGACCGGCCGCAAA +
Preference number: 5 (lower is better)
Translates to: ALLQAAGQSITCARH*RRARPRPTRTTGRK
Trigger: TTTGCGGCCGGTCGTGCGGGTCGGGCGCGGGCGGGCGCGGCGGCAGTGGCGCGCACAGGTGATTGACTGGCCAGCTGCCTGAAGGAGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400301.5
ENST00000421625.6
ENST00000532737.1
CDS GCA 90 bp GCCGCCGCCGCGGTCTGCACCGCCGCCCCAATGGGCTTCGCCACCTaGCAGCAAGGAGGACCTGGCGCTCCTTCAGGCAGCTGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: AAAAVCTAAPMGFAT*QQGGPGAPSGSWPV
Trigger: GACTGGCCAGCTGCCTGAAGGAGCGCCAGGTCCTCCTTGCTGGCAGGTGGCGAAGCCCATTGGGGCGGCGGTGCAGACCGCGGCGGCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
ENST00000532737.1
CDS GCA 90 bp GCGCCCGCGGACGTTAAAGGTGGACTCCCCGCCGCGCTGAGCGCATaGGCGTTCCCAGCAGCCTCTGCGCCTCCCGCGCCCCTAACCCGA +
Preference number: 5 (lower is better)
Translates to: APADVKGGLPAALSA*AFPAASAPPAPLTR
Trigger: TCGGGTTAGGGGCGCGGGAGGCGCAGAGGCTGCTGGGAACGCGCATGCGCTCAGCGCGGCGGGGAGTCCACCTTTAACGTCCGCGGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS CCA 90 bp TTCGCCACCTGCCAGCAAGGAGGACCTGGCGCTCCTTCAGGCAGCTaGCCAGTCAATCACCTGTGCGCGCCACTGCCGCCGCGCCCGCCC +
Preference number: 5 (lower is better)
Translates to: FATCQQGGPGAPSGS*PVNHLCAPLPPRPP
Trigger: GGGCGGGCGCGGCGGCAGTGGCGCGCACAGGTGATTGACTGGCCAGCTGCCTGAAGGAGCGCCAGGTCCTCCTTGCTGGCAGGTGGCGAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
ENST00000532737.1
CDS TCA 90 bp GTTCCCAGCAGCCTCTGCGCCTCCCGCGCCCCTAACCCGACGGGCTaGGGTAGAGGAAGCGTACGTCCGAGGCGGTCTTGCCACGTCCTC +
Preference number: 5 (lower is better)
Translates to: VPSSLCASRAPNPTG*GRGSVRPRRSCHVL
Trigger: GAGGACGTGGCAAGACCGCCTCGGACGTACGCTTCCTCTACCTCAGCCCGTCGGGTTAGGGGCGCGGGAGGCGCAGAGGCTGCTGGGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS CCA 90 bp CACCGCCGCCCCAATGGGCTTCGCCACCTGCCAGCAAGGAGGACCTaGCGCTCCTTCAGGCAGCTGGCCAGTCAATCACCTGTGCGCGCC +
Preference number: 5 (lower is better)
Translates to: HRRPNGLRHLPARRT*RSFRQLASQSPVRA
Trigger: GGCGCGCACAGGTGATTGACTGGCCAGCTGCCTGAAGGAGCGCCAGGTCCTCCTTGCTGGCAGGTGGCGAAGCCCATTGGGGCGGCGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
ENST00000532737.1
CDS GCA 90 bp TGCAGTTTCGTCTGCACACGCCGCGAATGCAGGGCTCCAGCCAGATaGGGTAAGCGGTCTCGATGTGCTCCTGCGACACCTCCTCGGGCC +
Preference number: 5 (lower is better)
Translates to: CSFVCTRRECRAPAR*GKRSRCAPATPPRA
Trigger: GGCCCGAGGAGGTGTCGCAGGAGCACATCGAGACCGCTTACCGCATCTGGCTGGAGCCCTGCATTCGCGGCGTGTGCAGACGAAACTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
ENST00000489108.1
ENST00000529637.5
CDS GCA 90 bp TGCAGTTTCGTCTGCACACGCCGCGAATGCAGGGCTCCAGCCAGATaGGGTAAGCGGTCTCGATGTGCTCCTGCGACACCTCCCGAGCCA +
Preference number: 5 (lower is better)
Translates to: CSFVCTRRECRAPAR*GKRSRCAPATPPEP
Trigger: TGGCTCGGGAGGTGTCGCAGGAGCACATCGAGACCGCTTACCGCATCTGGCTGGAGCCCTGCATTCGCGGCGTGTGCAGACGAAACTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532737.1
CDS CCA 90 bp AAGCGTACGTCCGAGGCGGTCTTGCCACGTCCTCACTGGCACTTCTaGAAAAGCAGCGTCTCAGCCCCCGTTCAGGGCGGCGCACTACGT +
Preference number: 5 (lower is better)
Translates to: KRTSEAVLPRPHWHF*KSSVSAPVQGGALR
Trigger: ACGTAGTGCGCCGCCCTGAACGGGGGCTGAGACGCTGCTTTTCCAGAAGTGCCAGTGAGGACGTGGCAAGACCGCCTCGGACGTACGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CAA 90 bp TACCCAATACCAAGAGACAGACGGCCGGGCAGGTGTAAGGCGGGTGGCGCTGCAGACATAGATGGTGGCTaGAGTGTATTCACGCAGGTC +
Preference number: 5 (lower is better)
Translates to: YPIPRDRRPGRCKAGGAADIDGG*SVFTQV
Trigger: GACCTGCGTGAATACACTCAAGCCACCATCTATGTC...TGCAGCGCCACCCGCCTTACACCTGCCCGGCCGTCTGTCTCTTGGTATTGGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp AGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACGCATCCGCGGGGCCATGGCCTaGGCCCCAGGAACGCCTCCC +
Preference number: 5 (lower is better)
Translates to: RAECCPIYLIQSFMDQRIRGAMA*APGTPP
Trigger: GGGAGGCGTTCCTGGGGCCAAGGCCATGGCCCCGCG...GATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TACCCAATACCAAGAGACAGACGGCCGGGCAGGTGTAAGGCGGGTGGCGCTGCAATAATTCCTTGCTCATaGCAGGAGACATGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: YPIPRDRRPGRCKAGGAAIIPCS*QETCRC
Trigger: GCACCTGCATGTCTCCTGCAATGAGCAAGGAATTAT...TGCAGCGCCACCCGCCTTACACCTGCCCGGCCGTCTGTCTCTTGGTATTGGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp AAAGGGATAAGCTGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGACGCGGGGCCATGGCCTaGGCCCCAGGAACGCCTCCC +
Preference number: 5 (lower is better)
Translates to: KGISWIMWDISKKSGVSRRGAMA*APGTPP
Trigger: GGGAGGCGTTCCTGGGGCCAAGGCCATGGCCCCGCG...TCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS CCA 90 bp TGTTCTGCATCACCATCTTGCTCATCCAGCTGTTCAAGAGCTAGCTaGCGCCAACTCCGCAAGGAGGACTTCCCCACCCAAAATCCATCG +
Preference number: 5 (lower is better)
Translates to: CSASPSCSSSCSRAS*RQLRKEDFPTQNPS
Trigger: CGATGGATTTTGGGTGGGGAAGTCCTCCTTGCGGAGTTGGCGCCAGCTAGCTCTTGAACAGCTGGATGAGCAAGATGGTGATGCAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000487880.2
ENST00000529637.5
CDS-3UTR CAA 90 bp TACCCAATACCAAGAGACAGACGGCCGGGCAGGTGTAAGGCGGGTGGCGCTGCATGGGAGAGAAGTCTTTaGCTCGTTTGCAATCATCTT +
Preference number: 5 (lower is better)
Translates to: YPIPRDRRPGRCKAGGAAWERSL*LVCNHL
Trigger: AAGATGATTGCAAACGAGCAAAAGACTTCTCTCCCA...TGCAGCGCCACCCGCCTTACACCTGCCCGGCCGTCTGTCTCTTGGTATTGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TACCCAATACCAAGAGACAGACGGCCGGGCAGGTGTAAGGCGGGTGGCGCTGCAGTTCAGAGCAGAATGTaGTCCCATCTACTTGATACA +
Preference number: 5 (lower is better)
Translates to: YPIPRDRRPGRCKAGGAAVQSRM*SHLLDT
Trigger: TGTATCAAGTAGATGGGACAACATTCTGCTCTGAAC...TGCAGCGCCACCCGCCTTACACCTGCCCGGCCGTCTGTCTCTTGGTATTGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS GCA 90 bp GTGCTACCGTTCATCTTTCCGTTGCTTTGTTCTGCATCACCATCTTaGTCATCCAGCTGTTCAAGAGCTAGCTGGCGCCAACTCCGCAAG +
Preference number: 5 (lower is better)
Translates to: VLPFIFPLLCSASPS*SSSCSRASWRQLRK
Trigger: CTTGCGGAGTTGGCGCCAGCTAGCTCTTGAACAGCTGGATGAGCAAGATGGTGATGCAGAACAAAGCAACGGAAAGATGAACGGTAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000471752.1
ENST00000487880.2
ENST00000529637.5
CDS-3UTR CAA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATCGCGGGGCCATGGCCTaGGCCCCAGGAACGCCTCCC +
Preference number: 5 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYRGAMA*APGTPP
Trigger: GGGAGGCGTTCCTGGGGCCAAGGCCATGGCCCCGCG...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TACCCAATACCAAGAGACAGACGGCCGGGCAGGTGTAAGGCGGGTGGCGCTGCAGAAGTCGAATCTTTCTaGTTGCATTCTGTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: YPIPRDRRPGRCKAGGAAEVESF*LHSVCF
Trigger: AAAGCAAACAGAATGCAACAAGAAAGATTCGACTTC...TGCAGCGCCACCCGCCTTACACCTGCCCGGCCGTCTGTCTCTTGGTATTGGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp GCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACAGACGGCCGGAGATGCTCACAAATaGTTTGAGGCTCATAATCTT +
Preference number: 5 (lower is better)
Translates to: AGDMQVPPPLPNTKRQTAGDAHK*FEAHNL
Trigger: AAGATTATGAGCCTCAAACAATTTGTGAGCATCTCC...GGCCGTCTGTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp GCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACAGACGGCCTGTTGTCCCATCTACTaGATACAATCCTTTATGGAC +
Preference number: 5 (lower is better)
Translates to: AGDMQVPPPLPNTKRQTACCPIY*IQSFMD
Trigger: GTCCATAAAGGATTGTATCAAGTAGATGGGACAACA...GGCCGTCTGTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS CCA 90 bp GTTATTTTCTTGACTAGTTTCCCTGGAGAGAAATCCCTTCCCACCTaGGGGAGGGTAAGTAATGGGCTGCCCGAATTTGAGCAAAGGGCT +
Preference number: 5 (lower is better)
Translates to: VIFLTSFPGEKSLPT*GRVSNGLPEFEQRA
Trigger: AGCCCTTTGCTCAAATTCGGGCAGCCCATTACTTACCCTCCCCCAGGTGGGAAGGGATTTCTCTCCAGGGAAACTAGTCAAGAAAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464577.1
CDS-3UTR CAA 90 bp GCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACAGACGGCCGTTGAGAAACCACACTaGAAGAAATGTGTTGACATA +
Preference number: 5 (lower is better)
Translates to: AGDMQVPPPLPNTKRQTAVEKPH*KKCVDI
Trigger: TATGTCAACACATTTCTTCAAGTGTGGTTTCTCAAC...GGCCGTCTGTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TGCTCATTGCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACAGTCACTACAAGTGCTaGGACATAAGTAGAGTGCCT +
Preference number: 5 (lower is better)
Translates to: CSLQETCRCPLLYPIPRDSHYKC*DISRVP
Trigger: AGGCACTCTACTTATGTCCAAGCACTTGTAGTGACT...GTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGCAATGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TGCTCATTGCAGGAGACATGCAGGTGCCCCCTCCTTTACCCAATACCAAGAGACATGGATTTCTGCCTTTaGGAAGGGGCATGTAATGGT +
Preference number: 5 (lower is better)
Translates to: CSLQETCRCPLLYPIPRDMDFCL*EGACNG
Trigger: ACCATTACATGCCCCTTCCAAAAGGCAGAAATCCAT...GTCTCTTGGTATTGGGTAAAGGAGGGGGCACCTGCATGTCTCCTGCAATGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp CTATTACTGCTACTAAACTTGTTCCGTCTTTACTTGCCCCCTCCCACCCACCACCAATTCGGATTTCCTTaGCAGTTTCGTCTGCACACG +
Preference number: 5 (lower is better)
Translates to: LLLLLNLFRLYLPPPTHHQFGFP*QFRLHT
Trigger: CGTGTGCAGACGAAACTGCAAAGGAAATCCGAATTG...GTGGTGGGTGGGAGGGGGCAAGTAAAGACGGAACAAGTTTAGTAGCAGTAATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTACGTCCGAGGCGGTCTaGCCACGTCCTCACTGGCAC +
Preference number: 5 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGTSEAV*PRPHWH
Trigger: GTGCCAGTGAGGACGTGGCAAGACCGCCTCGGACGT...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS GCA 90 bp GATGTAGTGGCCAGAATAAGCACTCACTCCTCTGTGTATGAGGACTaGGCTGAGTTCATACACGTAGGACCCACCTTTATGTTCCACATA +
Preference number: 5 (lower is better)
Translates to: DVVARISTHSSVYED*AEFIHVGPTFMFHI
Trigger: TATGTGGAACATAAAGGTGGGTCCTACGTGTATGAACTCAGCGCAGTCCTCATACACAGAGGAGTGAGTGCTTATTCTGGCCACTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308271.14
ENST00000374730.2
ENST00000400301.5
ENST00000421625.6
ENST00000529637.5
CDS-3UTR CAA 90 bp CTATTACTGCTACTAAACTTGTTCCGTCTTTACTTGCCCCCTCCCACCCACCACCACCACTCCTCAAATTaGGAATTATCCCGATCTACC +
Preference number: 5 (lower is better)
Translates to: LLLLLNLFRLYLPPPTHHHHSSN*ELSRST
Trigger: GGTAGATCGGGATAATTCCAAATTTGAGGAGTGGTG...GTGGTGGGTGGGAGGGGGCAAGTAAAGACGGAACAAGTTTAGTAGCAGTAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS TCA 90 bp TTCAAGGAGCTGTGCACCATAATGCTGAGTCTGCACAGTGCCCTATaGGATCGGCTGGTATTATTAACCACATTCTACAAGAGGCATCCA +
Preference number: 5 (lower is better)
Translates to: FKELCTIMLSLHSAL*DRLVLLTTFYKRHP
Trigger: TGGATGCCTCTTGTAGAATGTGGTTAATAATACCAGCCGATCTCATAGGGCACTGTGCAGACTCAGCATTATGGTGCACAGCTCCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS-3UTR CAA 90 bp GCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGCATGTACAATTCGGATTTCCTTaGCAGTTTCGTCTGCACACG +
Preference number: 5 (lower is better)
Translates to: AFGTVTFEWISAFWKGHVQFGFP*QFRLHT
Trigger: CGTGTGCAGACGAAACTGCAAAGGAAATCCGAATTG...TACATGCCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAATTGAGCATCCTGCTGTaGTCCAGTGTCCAGGCCCAA +
Preference number: 5 (lower is better)
Translates to: SFRAECCPIYLIQSFMDQLSILL*SSVQAQ
Trigger: TTGGGCCTGGACACTGGACAACAGCAGGATGCTCAA...TTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp AAAGGGATAAGCTGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGATTGAGCATCCTGCTGTaGTCCAGTGTCCAGGCCCAA +
Preference number: 5 (lower is better)
Translates to: KGISWIMWDISKKSGVSRLSILL*SSVQAQ
Trigger: TTGGGCCTGGACACTGGACAACAGCAGGATGCTCAA...TCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS TCA 90 bp CTCCCCTTCCTCCTCCCATTCCCAAGTTCTGGAAGGAGTCACTTTTaGCTCACACAGCAGCTTCTTCTGGTATTTAGCCTATTTCTAAAT +
Preference number: 5 (lower is better)
Translates to: LPFLLPFPSSGRSHF*LTQQLLLVFSLFLN
Trigger: ATTTAGAAATAGGCTAAATACCAGAAGAAGCTGCTGTGTGAGTCAAAAGTGACTCCTTCCAGAACTTGGGAATGGGAGGAGGAAGGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479177.1
CDS CCA 90 bp AGGGTAAGTAATGGGCTGCCCGAATTTGAGCAAAGGGCTAAGAGATaGTCTCCTATTTGGTATAGGCTTCGTTCCCACCTTTCTAGTTTA +
Preference number: 5 (lower is better)
Translates to: RVSNGLPEFEQRAKR*SPIWYRLRSHLSSL
Trigger: TAAACTAGAAAGGTGGGAACGAAGCCTATACCAAATAGGAGACCATCTCTTAGCCCTTTGCTCAAATTCGGGCAGCCCATTACTTACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464577.1
CDS-3UTR CAA 90 bp TTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTGAGCATCCTGCTGTaGTCCAGTGTCCAGGCCCAA +
Preference number: 5 (lower is better)
Translates to: FMDQRIWYETRARKYNRTLSILL*SSVQAQ
Trigger: TTGGGCCTGGACACTGGACAACAGCAGGATGCTCAA...AGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp CATAAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGTCCACAGAACTGCTGTaGAACAATATTGCGCACATC +
Preference number: 5 (lower is better)
Translates to: HKAFGTVTFEWISAFWKGSTELL*NNIAHI
Trigger: GATGTGCGCAATATTGTTCAACAGCAGTTCTGTGGA...CCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TACTTGATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGCCGATCTACCAGCTCTaGAAGAAAGGCTGGAACTTG +
Preference number: 5 (lower is better)
Translates to: YLIQSFMDQRIWYETRARPIYQL*KKGWNL
Trigger: CAAGTTCCAGCCTTTCTTCAAGAGCTGGTAGATCGG...CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp GCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGCATGTAGAGCTTTTGTATCATTaGCCACTCACTGGGCCATAT +
Preference number: 5 (lower is better)
Translates to: AFGTVTFEWISAFWKGHVELLYH*PLTGPY
Trigger: ATATGGCCCAGTGAGTGGCAAATGATACAAAAGCTC...TACATGCCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp CGGTTACGTGTTGCTAAGAATGATAATCCTGAGTTGGATGGACAGCACATCCATATAATTCCTTGCTCATaGCAGGAGACATGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: RLRVAKNDNPELDGQHIHIIPCS*QETCRC
Trigger: GCACCTGCATGTCTCCTGCAATGAGCAAGGAATTAT...ATGGATGTGCTGTCCATCCAACTCAGGATTATCATTCTTAGCAACACGTAACCG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS TCA 90 bp ATCCTGCTGTTGTCCAGTGTCCAGGCCCAAGGCTTTAACAAATCCTaGTGGATCAATGTATCGCCTATTACTGTTTTGCAACAAGGCAAA +
Preference number: 5 (lower is better)
Translates to: ILLLSSVQAQGFNKS*WINVSPITVLQQGK
Trigger: TTTGCCTTGTTGCAAAACAGTAATAGGCGATACATTGATCCATCAGGATTTGTTAAAGCCTTGGGCCTGGACACTGGACAACAGCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
ENST00000529637.5
CDS TCA 90 bp ATGGGAACACAGGCAAGCGTGATTATCAATAGGTTTGGTAGGTGTTaGTTCATCCAACCACTTTTGCAGCCATTCCAGAGAGACAAACTC +
Preference number: 5 (lower is better)
Translates to: MGTQASVIINRFGRC*FIQPLLQPFQRDKL
Trigger: GAGTTTGTCTCTCTGGAATGGCTGCAAAAGTGGTTGGATGAATCAACACCTACCAAACCTATTGATAATCACGCTTGCCTGTGTTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000487880.2
ENST00000526044.5
ENST00000529637.5
ENST00000534705.5
CDS CCA 90 bp TCCGTATCCTCTGGCCAGTTACTGAGACACGGTCTGTTTTTATCCTaGAACAAATTTGGGAGAGAAGTCTTTTGCTCGTTTGCAATCATC +
Preference number: 5 (lower is better)
Translates to: SVSSGQLLRHGLFLS*NKFGREVFCSFAII
Trigger: GATGATTGCAAACGAGCAAAAGACTTCTCTCCCAAATTTGTTCCAGGATAAAAACAGACCGTGTCTCAGTAACTGGCCAGAGGATACGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000529637.5
CDS CCA 90 bp GGGCTGCCCGAATTTGAGCAAAGGGCTAAGAGATGGTCTCCTATTTaGTATAGGCTTCGTTCCCACCTTTCTAGTTTAATTTTTCCAAGT +
Preference number: 5 (lower is better)
Translates to: GLPEFEQRAKRWSPI*YRLRSHLSSLIFPS
Trigger: ACTTGGAAAAATTAAACTAGAAAGGTGGGAACGAAGCCTATACCAAATAGGAGACCATCTCTTAGCCCTTTGCTCAAATTCGGGCAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464577.1
CDS-3UTR CAA 90 bp CGGTTACGTGTTGCTAAGAATGATAATCCTGAGTTGGATGGACAGCACATCCATAAGAAAGGCTGGAACTaGAACAGTAGTGTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: RLRVAKNDNPELDGQHIHKKGWN*NSSVGL
Trigger: AAGCCCAACACTACTGTTCAAGTTCCAGCCTTTCTT...ATGGATGTGCTGTCCATCCAACTCAGGATTATCATTCTTAGCAACACGTAACCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TGTCCATCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTTTCATCCAACCACTTTaGCAGCCATTCCAGAGAGAC +
Preference number: 5 (lower is better)
Translates to: CPSVQSALFDIRHLGQSRFIQPL*QPFQRD
Trigger: GTCTCTCTGGAATGGCTGCAAAAGTGGTTGGATGAA...ACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGATGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp AGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACGCATCTTCTGCATCACCATCTaGCTCATCCAGCTGTTCAAG +
Preference number: 5 (lower is better)
Translates to: RAECCPIYLIQSFMDQRIFCITI*LIQLFK
Trigger: CTTGAACAGCTGGATGAGCAAGATGGTGATGCAGAA...GATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp CATAAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGGTTCAGAGCAGAATGTaGTCCCATCTACTTGATACA +
Preference number: 5 (lower is better)
Translates to: HKAFGTVTFEWISAFWKGVQSRM*SHLLDT
Trigger: TGTATCAAGTAGATGGGACAACATTCTGCTCTGAAC...CCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACCATCCACATAGAGTCTaGCCGAATAGCACAGCAGAG +
Preference number: 5 (lower is better)
Translates to: IWYETRARKYNRTLFPSHHPHRV*PNSTAE
Trigger: CTCTGCTGTGCTATTCGGCAAGACTCTATGTGGATG...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS CCA 90 bp AATCCTTCATCACCTTTTTATTATCCACAACTTTATGGACATAGATaGTGGCTTGAGTGTATTCACGCAGGTCCCTCTGCTGCTGACACA +
Preference number: 5 (lower is better)
Translates to: NPSSPFYYPQLYGHR*WLECIHAGPSAADT
Trigger: TGTGTCAGCAGCAGAGGGACCTGCGTGAATACACTCAAGCCACCATCTATGTCCATAAAGTTGTGGATAATAAAAAGGTGATGAAGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000529637.5
CDS-3UTR CAA 90 bp CATAAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGTTTCTTATGTCCAGTTaGCCTGTCAAAGACAAAACG +
Preference number: 5 (lower is better)
Translates to: HKAFGTVTFEWISAFWKGFLMSS*PVKDKT
Trigger: CGTTTTGTCTTTGACAGGCAAACTGGACATAAGAAA...CCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp ACATATATGCATTTCGAGAGCAATGAGTTCCTTTGCCACACTTGGGTTTACGTGAAGAAAGGCTGGAACTaGAACAGTAGTGTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: TYMHFESNEFLCHTWVYVKKGWN*NSSVGL
Trigger: AAGCCCAACACTACTGTTCAAGTTCCAGCCTTTCTT...CACGTAAACCCAAGTGTGGCAAAGGAACTCATTGCTCTCGAAATGCATATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374730.2
CDS-3UTR CAA 90 bp AGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACGCATCTCCTTTATCCACACTTaGCTTACGCATCTCAGCCAT +
Preference number: 5 (lower is better)
Translates to: RAECCPIYLIQSFMDQRISFIHT*LTHLSH
Trigger: ATGGCTGAGATGCGTAAGCAAAGTGTGGATAAAGGA...GATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp CTCAGCCATTTCAATACACCACTCCTCAAATTTGGAATTATCCCGATCTACCAGTCCTTTATCCACACTTaGCTTACGCATCTCAGCCAT +
Preference number: 5 (lower is better)
Translates to: LSHFNTPLLKFGIIPIYQSFIHT*LTHLSH
Trigger: ATGGCTGAGATGCGTAAGCAAAGTGTGGATAAAGGA...CTGGTAGATCGGGATAATTCCAAATTTGAGGAGTGGTGTATTGAAATGGCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374730.2
CDS-3UTR CAA 90 bp AGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACGCATCCTTTCACAGTTAGTCTaGGACCTCCTCCATATCTAC +
Preference number: 5 (lower is better)
Translates to: RAECCPIYLIQSFMDQRILSQLV*DLLHIY
Trigger: GTAGATATGGAGGAGGTCCAAGACTAACTGTGAAAG...GATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACTTCTGCATCACCATCTaGCTCATCCAGCTGTTCAAG +
Preference number: 5 (lower is better)
Translates to: IWYETRARKYNRTLFPSHFCITI*LIQLFK
Trigger: CTTGAACAGCTGGATGAGCAAGATGGTGATGCAGAA...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp CATAAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGTCTCTTTCTAAAATCTaGCACTGTGAACAGCACTCT +
Preference number: 5 (lower is better)
Translates to: HKAFGTVTFEWISAFWKGSLSKI*HCEQHS
Trigger: AGAGTGCTGTTCACAGTGCAAGATTTTAGAAAGAGA...CCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp CGGTTACGTGTTGCTAAGAATGATAATCCTGAGTTGGATGGACAGCACATCCATTGGGAGAGAAGTCTTTaGCTCGTTTGCAATCATCTT +
Preference number: 5 (lower is better)
Translates to: RLRVAKNDNPELDGQHIHWERSL*LVCNHL
Trigger: AAGATGATTGCAAACGAGCAAAAGACTTCTCTCCCA...ATGGATGTGCTGTCCATCCAACTCAGGATTATCATTCTTAGCAACACGTAACCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp AAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGCATTGTTGTCCCATCTACTaGATACAATCCTTTATGGAC +
Preference number: 5 (lower is better)
Translates to: KAFGTVTFEWISAFWKGHCCPIY*IQSFMD
Trigger: GTCCATAAAGGATTGTATCAAGTAGATGGGACAACA...ATGCCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp AAAGGGATAAGCTGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGACTCGAAAGCTATTTCTaGCCTCCGGTACTTCCCTTT +
Preference number: 5 (lower is better)
Translates to: KGISWIMWDISKKSGVSRLESYF*PPVLPF
Trigger: AAAGGGAAGTACCGGAGGCAAGAAATAGCTTTCGAG...TCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS TCA 90 bp CAACCACTTTTGCAGCCATTCCAGAGAGACAAACTCATAGGGCTCTaGGAAAGCAAGCATCGGAAAGAGCCTATGTATTTTTACAGTTTT +
Preference number: 5 (lower is better)
Translates to: QPLLQPFQRDKLIGL*ESKHRKEPMYFYSF
Trigger: AAAACTGTAAAAATACATAGGCTCTTTCCGATGCTTGCTTTCTCAGAGCCCTATGAGTTTGTCTCTCTGGAATGGCTGCAAAAGTGGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS CCA 90 bp CTTTTCTATGTCTTCATCATTAAACTTATACCATTCACCAGACTGTaGATCTTTCACGTGGGCGATGTAGTGGCCAGAATAAGCACTCAC +
Preference number: 5 (lower is better)
Translates to: LFYVFIIKLIPFTRL*IFHVGDVVARISTH
Trigger: GTGAGTGCTTATTCTGGCCACTACATCGCCCACGTGAAAGATCCACAGTCTGGTGAATGGTATAAGTTTAATGATGAAGACATAGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308271.14
ENST00000374730.2
ENST00000400301.5
ENST00000421625.6
ENST00000529637.5
CDS CCA 90 bp ATGCAAACTCTGTCCAGAGTTAGCAGAATCAGAAGAATCATTGTCTaGGGGAAGATGTTTGATGAGTACGACACAAAGCTCCAGTTAAGT +
Preference number: 5 (lower is better)
Translates to: MQTLSRVSRIRRIIV*GKMFDEYDTKLQLS
Trigger: ACTTAACTGGAGCTTTGTGTCGTACTCATCAAACATCTTCCCCCAGACAATGATTCTTCTGATTCTGCTAACTCTGGACAGAGTTTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS-3UTR CAA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACAAGAAAGGCTGGAACTaGAACAGTAGTGTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: IWYETRARKYNRTLFPSHKKGWN*NSSVGL
Trigger: AAGCCCAACACTACTGTTCAAGTTCCAGCCTTTCTT...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp AAAGGGATAAGCTGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAAAGAAAGGCTGGAACTaGAACAGTAGTGTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: KGISWIMWDISKKSGVSRKKGWN*NSSVGL
Trigger: AAGCCCAACACTACTGTTCAAGTTCCAGCCTTTCTT...TCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CAA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTCCGATCTACCAGCTCTaGAAGAAAGGCTGGAACTTG +
Preference number: 5 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGPIYQL*KKGWNL
Trigger: CAAGTTCCAGCCTTTCTTCAAGAGCTGGTAGATCGG...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CAA 90 bp AAACCAACATATATGCATTTCGAGAGCAATGAGTTCCTTTGCCACACTTGGGTTCACCACTCCTCAAATTaGGAATTATCCCGATCTACC +
Preference number: 5 (lower is better)
Translates to: KPTYMHFESNEFLCHTWVHHSSN*ELSRST
Trigger: GGTAGATCGGGATAATTCCAAATTTGAGGAGTGGTG...AACCCAAGTGTGGCAAAGGAACTCATTGCTCTCGAAATGCATATATGTTGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374730.2
CDS-3UTR CAA 90 bp ATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACGACTATATTCTGCATCACCATCTaGCTCATCCAGCTGTTCAAG +
Preference number: 5 (lower is better)
Translates to: MKLEQGNITELYSPPTTIFCITI*LIQLFK
Trigger: CTTGAACAGCTGGATGAGCAAGATGGTGATGCAGAA...TATAGTCGTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACCATCTTTCCGTTGCTTaGTTCTGCATCACCATCTTG +
Preference number: 5 (lower is better)
Translates to: IWYETRARKYNRTLFPSHHLSVA*FCITIL
Trigger: CAAGATGGTGATGCAGAACAAAGCAACGGAAAGATG...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp ATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATCCGTTCATCTTTCCGTaGCTTTGTTCTGCATCACCA +
Preference number: 5 (lower is better)
Translates to: IQSFMDQRIWYETRARKYPFIFP*LCSASP
Trigger: TGGTGATGCAGAACAAAGCAACGGAAAGATGAACGG...ATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTCCGTTCATCTTTCCGTaGCTTTGTTCTGCATCACCA +
Preference number: 5 (lower is better)
Translates to: FMDQRIWYETRARKYNRTPFIFP*LCSASP
Trigger: TGGTGATGCAGAACAAAGCAACGGAAAGATGAACGG...AGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp CATAAGGCATTTGGGACAGTCACGTTTGAATGGATTTCTGCCTTTTGGAAGGGGAAGTCTTTTGCTCGTTaGCAATCATCTTATGTAAGG +
Preference number: 5 (lower is better)
Translates to: HKAFGTVTFEWISAFWKGKSFAR*QSSYVR
Trigger: CCTTACATAAGATGATTGCAAACGAGCAAAAGACTT...CCCCTTCCAAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAAATGCCTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAAGAGCTTTTGTATCATTaGCCACTCACTGGGCCATAT +
Preference number: 5 (lower is better)
Translates to: SFRAECCPIYLIQSFMDQELLYH*PLTGPY
Trigger: ATATGGCCCAGTGAGTGGCAAATGATACAAAAGCTC...TTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TGTCCATCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTCATTCTGGACAGAGTTaGGGCTCAGAAATATACTGT +
Preference number: 5 (lower is better)
Translates to: CPSVQSALFDIRHLGQSRHSGQS*GSEIYC
Trigger: ACAGTATATTTCTGAGCCCAAACTCTGTCCAGAATG...ACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGATGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGGACATAGATGGTGGCTaGAGTGTATTCACGCAGGTC +
Preference number: 5 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQDIDGG*SVFTQV
Trigger: GACCTGCGTGAATACACTCAAGCCACCATCTATGTC...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TGTCCATCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTTTGGGACAGTCACGTTaGAATGGATTTCTGCCTTTT +
Preference number: 5 (lower is better)
Translates to: CPSVQSALFDIRHLGQSRLGQSR*NGFLPF
Trigger: AAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAA...ACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGATGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp AGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACGCATCGTTCAGAGCAGAATGTaGTCCCATCTACTTGATACA +
Preference number: 5 (lower is better)
Translates to: RAECCPIYLIQSFMDQRIVQSRM*SHLLDT
Trigger: TGTATCAAGTAGATGGGACAACATTCTGCTCTGAAC...GATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TACTTGATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGTGCTTCGGTTACGTGTaGCTAAGAATGATAATCCTG +
Preference number: 5 (lower is better)
Translates to: YLIQSFMDQRIWYETRARCFGYV*LRMIIL
Trigger: CAGGATTATCATTCTTAGCAACACGTAACCGAAGCA...CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp AGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACGCATCTGCTTCGGTTACGTGTaGCTAAGAATGATAATCCTG +
Preference number: 5 (lower is better)
Translates to: RAECCPIYLIQSFMDQRICFGYV*LRMIIL
Trigger: CAGGATTATCATTCTTAGCAACACGTAACCGAAGCA...GATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp ATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACGACTATATCTGGGGGAAGATGTTaGATGAGTACGACACAAAGC +
Preference number: 5 (lower is better)
Translates to: MKLEQGNITELYSPPTTISGGRC*MSTTQS
Trigger: GCTTTGTGTCGTACTCATCAAACATCTTCCCCCAGA...TATAGTCGTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS-3UTR CAA 90 bp AGAATGTCTGTTAAAACTGTTAGGTCACAAAGTATGCAAAGAAACAGAACAGGCAGAGGGAGATTTAACTaGAGCCTAGACCGGTTCCGA +
Preference number: 5 (lower is better)
Translates to: RMSVKTVRSQSMQRNRTGRGRFN*SLDRFR
Trigger: TCGGAACCGGTCTAGGCTCAAGTTAAATCTCCCTCT...GCCTGTTCTGTTTCTTTGCATACTTTGTGACCTAACAGTTTTAACAGACATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS TCA 90 bp GGAGCCGAATCCTTCATCACTGGGCTCAGAAATATACTGTGTTTCTaGAGGGTTTACATCTCCCACTTCAATTCTCGTGATTTTAATTAC +
Preference number: 5 (lower is better)
Translates to: GAESFITGLRNILCF*RVYISHFNSRDFNY
Trigger: GTAATTAAAATCACGAGAATTGAAGTGGGAGATGTAAACCCTTCAGAAACACAGTATATTTCTGAGCCCAGTGATGAAGGATTCGGCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464577.1
CDS TCA 90 bp ATTTCCTTTGCAGTTTCGTTGTTAAAGTCAGATTTACCCTCCTTGTaGGACAGACGCCCAGAGCTTGGACTTATTCGTTTGCTTTATAGA +
Preference number: 5 (lower is better)
Translates to: ISFAVSLLKSDLPSL*DRRPELGLIRLLYR
Trigger: TCTATAAAGCAAACGAATAAGTCCAAGCTCTGGGCGTCTGTCTCACAAGGAGGGTAAATCTGACTTTAACAACGAAACTGCAAAGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527823.5
CDS GCA 90 bp AGCTCCTTAACCTCTTCGTGTTTTGCTTTTCCTTTATCCACACTTTaGTTACGCATCTCAGCCATTTCAATACACCACTCCTCAAATTTG +
Preference number: 5 (lower is better)
Translates to: SSLTSSCFAFPLSTL*LRISAISIHHSSNL
Trigger: CAAATTTGAGGAGTGGTGTATTGAAATGGCTGAGATGCGTAAGCAAAGTGTGGATAAAGGAAAAGCAAAACACGAAGAGGTTAAGGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
ENST00000526044.5
ENST00000529637.5
ENST00000534705.5
CDS-3UTR CAA 90 bp TTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTCCACAGAACTGCTGTaGAACAATATTGCGCACATC +
Preference number: 5 (lower is better)
Translates to: FMDQRIWYETRARKYNRTSTELL*NNIAHI
Trigger: GATGTGCGCAATATTGTTCAACAGCAGTTCTGTGGA...AGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TACTTGATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAGTGTTGGGCTTTTCTaGAGTTTGCAGTCTATAAAC +
Preference number: 5 (lower is better)
Translates to: YLIQSFMDQRIWYETRARSVGLF*SLQSIN
Trigger: GTTTATAGACTGCAAACTCAAGAAAAGCCCAACACT...CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TGTCCATCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTAGTGTTGGGCTTTTCTaGAGTTTGCAGTCTATAAAC +
Preference number: 5 (lower is better)
Translates to: CPSVQSALFDIRHLGQSRSVGLF*SLQSIN
Trigger: GTTTATAGACTGCAAACTCAAGAAAAGCCCAACACT...ACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGATGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp CTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCCGATCTACCAGCTCTaGAAGAAAGGCTGGAACTTG +
Preference number: 5 (lower is better)
Translates to: LKLLFVQSRMLSHLLDTIPIYQL*KKGWNL
Trigger: CAAGTTCCAGCCTTTCTTCAAGAGCTGGTAGATCGG...GATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp AGTAGTGTTGGGCTTTTCTTGAGTTTGCAGTCTATAAACCAACATATATGCATTCCGATCTACCAGCTCTaGAAGAAAGGCTGGAACTTG +
Preference number: 5 (lower is better)
Translates to: SSVGLFLSLQSINQHICIPIYQL*KKGWNL
Trigger: CAAGTTCCAGCCTTTCTTCAAGAGCTGGTAGATCGG...AATGCATATATGTTGGTTTATAGACTGCAAACTCAAGAAAAGCCCAACACTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374730.2
CDS-3UTR CAA 90 bp TCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTTTGAATCACCACTCCTCAAATTaGGAATTATCCCGATCTACC +
Preference number: 5 (lower is better)
Translates to: SVQSALFDIRHLGQSRLNHHSSN*ELSRST
Trigger: GGTAGATCGGGATAATTCCAAATTTGAGGAGTGGTG...ATTCAAACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACCACCACTCCTCAAATTaGGAATTATCCCGATCTACC +
Preference number: 5 (lower is better)
Translates to: WIMWDISKKSGVSRKLFYHHSSN*ELSRST
Trigger: GGTAGATCGGGATAATTCCAAATTTGAGGAGTGGTG...GTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CAA 90 bp TTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTCCTTTATCCACACTTaGCTTACGCATCTCAGCCAT +
Preference number: 5 (lower is better)
Translates to: FMDQRIWYETRARKYNRTSFIHT*LTHLSH
Trigger: ATGGCTGAGATGCGTAAGCAAAGTGTGGATAAAGGA...AGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGTTCATCCAACCACTTTaGCAGCCATTCCAGAGAGAC +
Preference number: 5 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQFIQPL*QPFQRD
Trigger: GTCTCTCTGGAATGGCTGCAAAAGTGGTTGGATGAA...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGTTCATCCAACCACTTTaGCAGCCATTCCAGAGAGAC +
Preference number: 5 (lower is better)
Translates to: YFSFRAECCPIYLIQSFMFIQPL*QPFQRD
Trigger: GTCTCTCTGGAATGGCTGCAAAAGTGGTTGGATGAA...CATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp ATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACGACTATAAAGTACTGCTGCAGTTaGCTCCAAGCCTCTTTAGAA +
Preference number: 5 (lower is better)
Translates to: MKLEQGNITELYSPPTTIKYCCS*LQASLE
Trigger: TTCTAAAGAGGCTTGGAGCAAACTGCAGCAGTACTT...TATAGTCGTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTAGCACTCTTTGTAACTaGGAAACTCAGGAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: FMDQRIWYETRARKYNRTSTLCN*ETQEPL
Trigger: CAAAGGCTCCTGAGTTTCCAAGTTACAAAGAGTGCT...AGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp ATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAGCACTCTTTGTAACTaGGAAACTCAGGAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: IQSFMDQRIWYETRARKYSTLCN*ETQEPL
Trigger: CAAAGGCTCCTGAGTTTCCAAGTTACAAAGAGTGCT...ATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp CGGTTACGTGTTGCTAAGAATGATAATCCTGAGTTGGATGGACAGCACATCCATAAGTCTTTTGCTCGTTaGCAATCATCTTATGTAAGG +
Preference number: 5 (lower is better)
Translates to: RLRVAKNDNPELDGQHIHKSFAR*QSSYVR
Trigger: CCTTACATAAGATGATTGCAAACGAGCAAAAGACTT...ATGGATGTGCTGTCCATCCAACTCAGGATTATCATTCTTAGCAACACGTAACCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TACTTGATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGCACAACAAAGAGCTTTaGTATCATTTGCCACTCACT +
Preference number: 5 (lower is better)
Translates to: YLIQSFMDQRIWYETRARHNKEL*YHLPLT
Trigger: AGTGAGTGGCAAATGATACAAAAGCTCTTTGTTGTG...CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACATTCTGGACAGAGTTaGGGCTCAGAAATATACTGT +
Preference number: 5 (lower is better)
Translates to: SFRAECCPIYLIQSFMDQHSGQS*GSEIYC
Trigger: ACAGTATATTTCTGAGCCCAAACTCTGTCCAGAATG...TTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp ACCCCTTCAATATTCTTAAGAATATTGCTTCGGTTACGTGTTGCTAAGAATGATGACATAGATGGTGGCTaGAGTGTATTCACGCAGGTC +
Preference number: 5 (lower is better)
Translates to: TPSIFLRILLRLRVAKNDDIDGG*SVFTQV
Trigger: GACCTGCGTGAATACACTCAAGCCACCATCTATGTC...ATCATTCTTAGCAACACGTAACCGAAGCAATATTCTTAAGAATATTGAAGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTTTGAATATGGATTTCTGCCTTTaGGAAGGGGCATGTAATGGT +
Preference number: 5 (lower is better)
Translates to: SVQSALFDIRHLGQSRLNMDFCL*EGACNG
Trigger: ACCATTACATGCCCCTTCCAAAAGGCAGAAATCCAT...ATTCAAACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTATGGATTTCTGCCTTTaGGAAGGGGCATGTAATGGT +
Preference number: 5 (lower is better)
Translates to: FMDQRIWYETRARKYNRTMDFCL*EGACNG
Trigger: ACCATTACATGCCCCTTCCAAAAGGCAGAAATCCAT...AGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TGTCCATCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTTTTGACATAAGGCATTaGGGACAGTCACGTTTGAAT +
Preference number: 5 (lower is better)
Translates to: CPSVQSALFDIRHLGQSRFDIRH*GQSRLN
Trigger: ATTCAAACGTGACTGTCCCAAATGCCTTATGTCAAA...ACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGATGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp AGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACGCATCTTTGACATAAGGCATTaGGGACAGTCACGTTTGAAT +
Preference number: 5 (lower is better)
Translates to: RAECCPIYLIQSFMDQRIFDIRH*GQSRLN
Trigger: ATTCAAACGTGACTGTCCCAAATGCCTTATGTCAAA...GATGCGTTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS TCA 90 bp GAAGGGTTTACATCTCCCACTTCAATTCTCGTGATTTTAATTACATaGTCCACAACAAAGAGCTTTTGTATCATTTGCCACTCACTGGGC +
Preference number: 5 (lower is better)
Translates to: EGFTSPTSILVILIT*STTKSFCIICHSLG
Trigger: GCCCAGTGAGTGGCAAATGATACAAAAGCTCTTTGTTGTGGATCATGTAATTAAAATCACGAGAATTGAAGTGGGAGATGTAAACCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000464577.1
ENST00000529637.5
CDS-3UTR CAA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTAGTCACTACAAGTGCTaGGACATAAGTAGAGTGCCT +
Preference number: 5 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGSHYKC*DISRVP
Trigger: AGGCACTCTACTTATGTCCAAGCACTTGTAGTGACT...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CAA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTTCCACAGAACTGCTGTaGAACAATATTGCGCACATC +
Preference number: 5 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGSTELL*NNIAHI
Trigger: GATGTGCGCAATATTGTTCAACAGCAGTTCTGTGGA...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CAA 90 bp TCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAAGGGCTTTTCTTGAGTTaGCAGTCTATAAACCAACAT +
Preference number: 5 (lower is better)
Translates to: SFRAECCPIYLIQSFMDQGLFLS*QSINQH
Trigger: ATGTTGGTTTATAGACTGCAAACTCAAGAAAAGCCC...TTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TGCTTTTCCTTTATCCACACTTTGCTTACGCATCTCAGCCATTTCAATACACCAGGGCTTTTCTTGAGTTaGCAGTCTATAAACCAACAT +
Preference number: 5 (lower is better)
Translates to: CFSFIHTLLTHLSHFNTPGLFLS*QSINQH
Trigger: ATGTTGGTTTATAGACTGCAAACTCAAGAAAAGCCC...TGGTGTATTGAAATGGCTGAGATGCGTAAGCAAAGTGTGGATAAAGGAAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374730.2
CDS-3UTR CAA 90 bp AAAGGGATAAGCTGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAGGGCTTTTCTTGAGTTaGCAGTCTATAAACCAACAT +
Preference number: 5 (lower is better)
Translates to: KGISWIMWDISKKSGVSRGLFLS*QSINQH
Trigger: ATGTTGGTTTATAGACTGCAAACTCAAGAAAAGCCC...TCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CAA 90 bp GCATCTCAGCCATTTCAATACACCACTCCTCAAATTTGGAATTATCCCGATCTAAGTGTTGGGCTTTTCTaGAGTTTGCAGTCTATAAAC +
Preference number: 5 (lower is better)
Translates to: ASQPFQYTTPQIWNYPDLSVGLF*SLQSIN
Trigger: GTTTATAGACTGCAAACTCAAGAAAAGCCCAACACT...TAGATCGGGATAATTCCAAATTTGAGGAGTGGTGTATTGAAATGGCTGAGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374730.2
CDS-3UTR CAA 90 bp AGAATGTCTGTTAAAACTGTTAGGTCACAAAGTATGCAAAGAAACAGAACAGGCTCCTTTATCCACACTTaGCTTACGCATCTCAGCCAT +
Preference number: 5 (lower is better)
Translates to: RMSVKTVRSQSMQRNRTGSFIHT*LTHLSH
Trigger: ATGGCTGAGATGCGTAAGCAAAGTGTGGATAAAGGA...GCCTGTTCTGTTTCTTTGCATACTTTGTGACCTAACAGTTTTAACAGACATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CAA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGCTTTCACAGTTAGTCTaGGACCTCCTCCATATCTAC +
Preference number: 5 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQLSQLV*DLLHIY
Trigger: GTAGATATGGAGGAGGTCCAAGACTAACTGTGAAAG...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGCATCTTTCCGTTGCTTaGTTCTGCATCACCATCTTG +
Preference number: 5 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQHLSVA*FCITIL
Trigger: CAAGATGGTGATGCAGAACAAAGCAACGGAAAGATG...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATCCGTTCATCTTTCCGTaGCTTTGTTCTGCATCACCA +
Preference number: 5 (lower is better)
Translates to: MSLKLLFVQSRMLSHLLDPFIFP*LCSASP
Trigger: TGGTGATGCAGAACAAAGCAACGGAAAGATGAACGG...ATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAAGTACTGCTGCAGTTaGCTCCAAGCCTCTTTAGAA +
Preference number: 5 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQKYCCS*LQASLE
Trigger: TTCTAAAGAGGCTTGGAGCAAACTGCAGCAGTACTT...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TACTTGATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAGTCTTTTGCTCGTTaGCAATCATCTTATGTAAGG +
Preference number: 5 (lower is better)
Translates to: YLIQSFMDQRIWYETRARKSFAR*QSSYVR
Trigger: CCTTACATAAGATGATTGCAAACGAGCAAAAGACTT...CCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTATCAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGGAGCTTTTGTATCATTaGCCACTCACTGGGCCATAT +
Preference number: 5 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQELLYH*PLTGPY
Trigger: ATATGGCCCAGTGAGTGGCAAATGATACAAAAGCTC...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp ATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACGACTATATTGATGGGATATCTTTaGCCGCTTTGTTCCACCATT +
Preference number: 5 (lower is better)
Translates to: MKLEQGNITELYSPPTTILMGYL*PLCSTI
Trigger: AATGGTGGAACAAAGCGGCAAAAGATATCCCATCAA...TATAGTCGTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308271.14
CDS-3UTR CAA 90 bp TCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTTTGAATTTCTGGCATACAAACTaGCATGACATCATCCATTGC +
Preference number: 5 (lower is better)
Translates to: SVQSALFDIRHLGQSRLNFWHTN*HDIIHC
Trigger: GCAATGGATGATGTCATGCAAGTTTGTATGCCAGAA...ATTCAAACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp ATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATTTCTGGCATACAAACTaGCATGACATCATCCATTGC +
Preference number: 5 (lower is better)
Translates to: IQSFMDQRIWYETRARKYFWHTN*HDIIHC
Trigger: GCAATGGATGATGTCATGCAAGTTTGTATGCCAGAA...ATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp ATACAATCCTTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAATGATAATCCTGAGTaGGATGGACAGCACATCCAT +
Preference number: 5 (lower is better)
Translates to: IQSFMDQRIWYETRARKYNDNPE*DGQHIH
Trigger: ATGGATGTGCTGTCCATCCAACTCAGGATTATCATT...ATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAAGGATTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACACCCATGTTTGTaGACTACAAGTCATGCTCCA +
Preference number: 5 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYGHPCL*TTSHAP
Trigger: TGGAGCATGACTTGTAGTCAACAAACATGGGTGTCC...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS TCA 90 bp TCTGCATTCTGGACAGAGTTTGGGCTCAGAAATATACTGTGTTTCTaGAGGGTTTACATCTCCCACTTCAATTCTCGTGATTTTAATTAC +
Preference number: 5 (lower is better)
Translates to: SAFWTEFGLRNILCF*RVYISHFNSRDFNY
Trigger: GTAATTAAAATCACGAGAATTGAAGTGGGAGATGTAAACCCTTCAGAAACACAGTATATTTCTGAGCCCAAACTCTGTCCAGAATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000529637.5
CDS-3UTR CAA 90 bp AAAGGGATAAGCTGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAGTTGAGAAACCACACTaGAAGAAATGTGTTGACATA +
Preference number: 5 (lower is better)
Translates to: KGISWIMWDISKKSGVSRVEKPH*KKCVDI
Trigger: TATGTCAACACATTTCTTCAAGTGTGGTTTCTCAAC...TCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CAA 90 bp ACCCCTTCAATATTCTTAAGAATATTGCTTCGGTTACGTGTTGCTAAGAATGATAGTCACTACAAGTGCTaGGACATAAGTAGAGTGCCT +
Preference number: 5 (lower is better)
Translates to: TPSIFLRILLRLRVAKNDSHYKC*DISRVP
Trigger: AGGCACTCTACTTATGTCCAAGCACTTGTAGTGACT...ATCATTCTTAGCAACACGTAACCGAAGCAATATTCTTAAGAATATTGAAGGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTTTGAATGGAGATGCTCACAAATaGTTTGAGGCTCATAATCTT +
Preference number: 5 (lower is better)
Translates to: SVQSALFDIRHLGQSRLNGDAHK*FEAHNL
Trigger: AAGATTATGAGCCTCAAACAATTTGTGAGCATCTCC...ATTCAAACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGACCAACAATCTGTTAACTGTTaGTGGCCTTGGATATTTAAC +
Preference number: 5 (lower is better)
Translates to: SFRAECCPIYLIQSFMDQQSVNC*WPWIFN
Trigger: GTTAAATATCCAAGGCCACAAACAGTTAACAGATTG...TTGGTCCATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp ATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTTTATTCCCCTCCCACTGCATTCTGTTTGCTTaGACAGTTCTCGCAAAAATA +
Preference number: 5 (lower is better)
Translates to: IWYETRARKYNRTLFPSHCILFA*TVLAKI
Trigger: TATTTTTGCGAGAACTGTCAAAGCAAACAGAATGCA...GTGGGAGGGGAATAAAGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TTTATGGACCAACGCATCTGGTATGAAACTCGAGCAAGGAAATATAACAGAACTGTCGAATCTTTCTTGTaGCATTCTGTTTGCTTTGAC +
Preference number: 5 (lower is better)
Translates to: FMDQRIWYETRARKYNRTVESFL*HSVCFD
Trigger: GTCAAAGCAAACAGAATGCAACAAGAAAGATTCGAC...AGTTCTGTTATATTTCCTTGCTCGAGTTTCATACCAGATGCGTTGGTCCATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp GTCTATAAACCAACATATATGCATTTCGAGAGCAATGAGTTCCTTTGCCACACTTTTCTTATGTCCAGTTaGCCTGTCAAAGACAAAACG +
Preference number: 5 (lower is better)
Translates to: VYKPTYMHFESNEFLCHTFLMSS*PVKDKT
Trigger: CGTTTTGTCTTTGACAGGCAAACTGGACATAAGAAA...AGTGTGGCAAAGGAACTCATTGCTCTCGAAATGCATATATGTTGGTTTATAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374730.2
CDS-3UTR CAA 90 bp TGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTTTCTTATGTCCAGTTaGCCTGTCAAAGACAAAACG +
Preference number: 5 (lower is better)
Translates to: WIMWDISKKSGVSRKLFYFLMSS*PVKDKT
Trigger: CGTTTTGTCTTTGACAGGCAAACTGGACATAAGAAA...GTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CAA 90 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATCTTTCACAGTTAGTCTaGGACCTCCTCCATATCTAC +
Preference number: 5 (lower is better)
Translates to: MSLKLLFVQSRMLSHLLDLSQLV*DLLHIY
Trigger: GTAGATATGGAGGAGGTCCAAGACTAACTGTGAAAG...ATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATCATCTTTCCGTTGCTTaGTTCTGCATCACCATCTTG +
Preference number: 5 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYHLSVA*FCITIL
Trigger: CAAGATGGTGATGCAGAACAAAGCAACGGAAAGATG...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATAAGTACTGCTGCAGTTaGCTCCAAGCCTCTTTAGAA +
Preference number: 5 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYKYCCS*LQASLE
Trigger: TTCTAAAGAGGCTTGGAGCAAACTGCAGCAGTACTT...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTTTGAATTCTCTTTCTAAAATCTaGCACTGTGAACAGCACTCT +
Preference number: 5 (lower is better)
Translates to: SVQSALFDIRHLGQSRLNSLSKI*HCEQHS
Trigger: AGAGTGCTGTTCACAGTGCAAGATTTTAGAAAGAGA...ATTCAAACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGCATTCTGGACAGAGTTaGGGCTCAGAAATATACTGT +
Preference number: 5 (lower is better)
Translates to: YFSFRAECCPIYLIQSFMHSGQS*GSEIYC
Trigger: ACAGTATATTTCTGAGCCCAAACTCTGTCCAGAATG...CATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGTTGGGACAGTCACGTTaGAATGGATTTCTGCCTTTT +
Preference number: 5 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQLGQSR*NGFLPF
Trigger: AAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAA...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTTTGAATTGTTGTCCCATCTACTaGATACAATCCTTTATGGAC +
Preference number: 5 (lower is better)
Translates to: SVQSALFDIRHLGQSRLNCCPIY*IQSFMD
Trigger: GTCCATAAAGGATTGTATCAAGTAGATGGGACAACA...ATTCAAACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTTTGAATGTACATTTCCCACTTTaGAATAACAGCAAAACCGGA +
Preference number: 5 (lower is better)
Translates to: SVQSALFDIRHLGQSRLNVHFPL*NNSKTG
Trigger: TCCGGTTTTGCTGTTATTCAAAAGTGGGAAATGTAC...ATTCAAACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAATGATAATCCTGAGTaGGATGGACAGCACATCCAT +
Preference number: 5 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQNDNPE*DGQHIH
Trigger: ATGGATGTGCTGTCCATCCAACTCAGGATTATCATT...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TCAGTGCAATCTGCTTTATTTGACATAAGGCATTTGGGACAGTCACGTTTGAATGATAAAGGGCCAGCTTaGATTACTTACAAAGATCTC +
Preference number: 5 (lower is better)
Translates to: SVQSALFDIRHLGQSRLNDKGPA*ITYKDL
Trigger: GAGATCTTTGTAAGTAATCAAAGCTGGCCCTTTATC...ATTCAAACGTGACTGTCCCAAATGCCTTATGTCAAATAAAGCAGATTGCACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS-3UTR CAA 90 bp TACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGAATCAGAAGAATCATaGTCTGGGGGAAGATGTTTG +
Preference number: 5 (lower is better)
Translates to: YFSFRAECCPIYLIQSFMESEES*SGGRCL
Trigger: CAAACATCTTCCCCCAGACAATGATTCTTCTGATTC...CATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS TCA 90 bp AACCTAATCAGCAGATTCCTAAAACAAATTCATCTTTACCTTGCATaGCATCATCCATTGCAGCATAATCTGCAATTGGTTCATCAGCCT +
Preference number: 5 (lower is better)
Translates to: NLISRFLKQIHLYLA*HHPLQHNLQLVHQP
Trigger: AGGCTGATGAACCAATTGCAGATTATGCTGCAATGGATGATGTCATGCAAGGTAAAGATGAATTTGTTTTAGGAATCTGCTGATTAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464577.1
CDS-3UTR CAA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTGGAGATGCTCACAAATaGTTTGAGGCTCATAATCTT +
Preference number: 5 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGGDAHK*FEAHNL
Trigger: AAGATTATGAGCCTCAAACAATTTGTGAGCATCTCC...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CAA 90 bp TGGATTATGTGGGATATTTCTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACCAATCTGTTAACTGTTaGTGGCCTTGGATATTTAAC +
Preference number: 5 (lower is better)
Translates to: WIMWDISKKSGVSRKLFYQSVNC*WPWIFN
Trigger: GTTAAATATCCAAGGCCACAAACAGTTAACAGATTG...GTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CAA 90 bp AGAATGTCTGTTAAAACTGTTAGGTCACAAAGTATGCAAAGAAACAGAACAGGCGTCGAATCTTTCTTGTaGCATTCTGTTTGCTTTGAC +
Preference number: 5 (lower is better)
Translates to: RMSVKTVRSQSMQRNRTGVESFL*HSVCFD
Trigger: GTCAAAGCAAACAGAATGCAACAAGAAAGATTCGAC...GCCTGTTCTGTTTCTTTGCATACTTTGTGACCTAACAGTTTTAACAGACATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CAA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTAGTGTTGGGCTTTTCTaGAGTTTGCAGTCTATAAAC +
Preference number: 5 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGSVGLF*SLQSIN
Trigger: GTTTATAGACTGCAAACTCAAGAAAAGCCCAACACT...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CAA 90 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATTGGGAGAGAAGTCTTTaGCTCGTTTGCAATCATCTT +
Preference number: 5 (lower is better)
Translates to: MSLKLLFVQSRMLSHLLDWERSL*LVCNHL
Trigger: AAGATGATTGCAAACGAGCAAAAGACTTCTCTCCCA...ATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TCAAAGACAGGCATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGATATCTTTTGCCGCTTaGTTCCACCATTGCTTTGAT +
Preference number: 5 (lower is better)
Translates to: SKTGIGKQVMSLKLLFVQISFAA*FHHCFD
Trigger: ATCAAAGCAATGGTGGAACAAAGCGGCAAAAGATAT...CTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAATGCCTGTCTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308271.14
CDS-3UTR CAA 90 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATTTGGGACAGTCACGTTaGAATGGATTTCTGCCTTTT +
Preference number: 5 (lower is better)
Translates to: MSLKLLFVQSRMLSHLLDLGQSR*NGFLPF
Trigger: AAAAGGCAGAAATCCATTCAAACGTGACTGTCCCAA...ATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp TACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGTTGAGAAACCACACTaGAAGAAATGTGTTGACATA +
Preference number: 5 (lower is better)
Translates to: YFSFRAECCPIYLIQSFMVEKPH*KKCVDI
Trigger: TATGTCAACACATTTCTTCAAGTGTGGTTTCTCAAC...CATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp CTAAGAAATCAGGGGTCAGCAGAAAGCTTTTCTACTCTTAGCATAATATTTGGTTGCATTCTGTTTGCTTaGACAGTTCTCGCAAAAATA +
Preference number: 5 (lower is better)
Translates to: LRNQGSAESFSTLSIIFGCILFA*TVLAKI
Trigger: TATTTTTGCGAGAACTGTCAAAGCAAACAGAATGCA...ACCAAATATTATGCTAAGAGTAGAAAAGCTTTCTGCTGACCCCTGATTTCTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CAA 90 bp ACCCCTTCAATATTCTTAAGAATATTGCTTCGGTTACGTGTTGCTAAGAATGATGTCGAATCTTTCTTGTaGCATTCTGTTTGCTTTGAC +
Preference number: 5 (lower is better)
Translates to: TPSIFLRILLRLRVAKNDVESFL*HSVCFD
Trigger: GTCAAAGCAAACAGAATGCAACAAGAAAGATTCGAC...ATCATTCTTAGCAACACGTAACCGAAGCAATATTCTTAAGAATATTGAAGGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp AGAATGTCTGTTAAAACTGTTAGGTCACAAAGTATGCAAAGAAACAGAACAGGCGAAGTCGAATCTTTCTaGTTGCATTCTGTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: RMSVKTVRSQSMQRNRTGEVESF*LHSVCF
Trigger: AAAGCAAACAGAATGCAACAAGAAAGATTCGACTTC...GCCTGTTCTGTTTCTTTGCATACTTTGTGACCTAACAGTTTTAACAGACATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS-3UTR CAA 90 bp ATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTTTCTTATGTCCAGTTaGCCTGTCAAAGACAAAACG +
Preference number: 5 (lower is better)
Translates to: IGKQVMSLKLLFVQSRMLFLMSS*PVKDKT
Trigger: CGTTTTGTCTTTGACAGGCAAACTGGACATAAGAAA...CAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp TTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATACAATCCTTTATGGGCTTTTCTTGAGTTaGCAGTCTATAAACCAACAT +
Preference number: 5 (lower is better)
Translates to: LLFVQSRMLSHLLDTILYGLFLS*QSINQH
Trigger: ATGTTGGTTTATAGACTGCAAACTCAAGAAAAGCCC...ATAAAGGATTGTATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATTCTCTTTCTAAAATCTaGCACTGTGAACAGCACTCT +
Preference number: 5 (lower is better)
Translates to: MSLKLLFVQSRMLSHLLDSLSKI*HCEQHS
Trigger: AGAGTGCTGTTCACAGTGCAAGATTTTAGAAAGAGA...ATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp ATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTCCCATCTACTTGATCACAACAAAGAGCTTTaGTATCATTTGCCACTCACT +
Preference number: 5 (lower is better)
Translates to: MSLKLLFVQSRMLSHLLDHNKEL*YHLPLT
Trigger: AGTGAGTGGCAAATGATACAAAAGCTCTTTGTTGTG...ATCAAGTAGATGGGACAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
CDS-3UTR CAA 90 bp ACCCCTTCAATATTCTTAAGAATATTGCTTCGGTTACGTGTTGCTAAGAATGATCACAACAAAGAGCTTTaGTATCATTTGCCACTCACT +
Preference number: 5 (lower is better)
Translates to: TPSIFLRILLRLRVAKNDHNKEL*YHLPLT
Trigger: AGTGAGTGGCAAATGATACAAAAGCTCTTTGTTGTG...ATCATTCTTAGCAACACGTAACCGAAGCAATATTCTTAAGAATATTGAAGGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp ATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGCAATCTGTTAACTGTTaGTGGCCTTGGATATTTAAC +
Preference number: 5 (lower is better)
Translates to: IGKQVMSLKLLFVQSRMLQSVNC*WPWIFN
Trigger: GTTAAATATCCAAGGCCACAAACAGTTAACAGATTG...CAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp ATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGTGCATTCTGTTTGCTTaGACAGTTCTCGCAAAAATA +
Preference number: 5 (lower is better)
Translates to: IGKQVMSLKLLFVQSRMLCILFA*TVLAKI
Trigger: TATTTTTGCGAGAACTGTCAAAGCAAACAGAATGCA...CAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp ACCCCTTCAATATTCTTAAGAATATTGCTTCGGTTACGTGTTGCTAAGAATGATGAAGTCGAATCTTTCTaGTTGCATTCTGTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: TPSIFLRILLRLRVAKNDEVESF*LHSVCF
Trigger: AAAGCAAACAGAATGCAACAAGAAAGATTCGACTTC...ATCATTCTTAGCAACACGTAACCGAAGCAATATTCTTAAGAATATTGAAGGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308271.14
ENST00000400301.5
CDS-3UTR CAA 90 bp ATTGGTAAGCAGGTTATGTCTCTAAAATTACTTTTCGTTCAGAGCAGAATGTTGACTTCGGCGAATAACTaGCTTTTGATAGGCTATATA +
Preference number: 5 (lower is better)
Translates to: IGKQVMSLKLLFVQSRMLTSANN*LLIGYI
Trigger: TATATAGCCTATCAAAAGCAAGTTATTCGCCGAAGT...CAACATTCTGCTCTGAACGAAAAGTAATTTTAGAGACATAACCTGCTTACCAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308271.14
CDS CCA 72 bp GCCAGGCCGCCTTCTCCAGCTGCAGCCGCGGGGCCATaGCCTTGGCCCCAGGAACGCCTCCCGAGCCAGACC +
Preference number: 6 (lower is better)
Translates to: ARPPSPAAAAGP*PWPQERLPSQT
Trigger: GGTCTGGCTCGGGAGGCGTTCCTGGGGCCAAGGCCATGGCCCCGCGGCTGCAGCTGGAGAAGGCGGCCTGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
CDS GCA 72 bp GCGGTCTGCACCGCCGCCCCAATGGGCTTCGCCACCTaGCAGCAAGGAGGACCTGGCGCTCCTTCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: AVCTAAPMGFAT*QQGGPGAPSGS
Trigger: GCTGCCTGAAGGAGCGCCAGGTCCTCCTTGCTGGCAGGTGGCGAAGCCCATTGGGGCGGCGGTGCAGACCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
ENST00000532737.1
CDS CCA 72 bp TCCGAGGCGGTCTTGCCACGTCCTCACTGGCACTTCTaGAAAAGCAGCGTCTCAGCCCCCGTTCAGGGCGGC +
Preference number: 6 (lower is better)
Translates to: SEAVLPRPHWHF*KSSVSAPVQGG
Trigger: GCCGCCCTGAACGGGGGCTGAGACGCTGCTTTTCCAGAAGTGCCAGTGAGGACGTGGCAAGACCGCCTCGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS GCA 72 bp GTCTGCACACGCCGCGAATGCAGGGCTCCAGCCAGATaGGGTAAGCGGTCTCGATGTGCTCCTGCGACACCT +
Preference number: 6 (lower is better)
Translates to: VCTRRECRAPAR*GKRSRCAPATP
Trigger: AGGTGTCGCAGGAGCACATCGAGACCGCTTACCGCATCTGGCTGGAGCCCTGCATTCGCGGCGTGTGCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
ENST00000489108.1
ENST00000529637.5
ENST00000532737.1
CDS CCA 72 bp CCCAATGGGCTTCGCCACCTGCCAGCAAGGAGGACCTaGCGCTCCTTCAGGCAGCTGGCCAGTCAATCACCT +
Preference number: 6 (lower is better)
Translates to: PNGLRHLPARRT*RSFRQLASQSP
Trigger: AGGTGATTGACTGGCCAGCTGCCTGAAGGAGCGCCAGGTCCTCCTTGCTGGCAGGTGGCGAAGCCCATTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
ENST00000532737.1
CDS CCA 72 bp AAGCGTACGTCCGAGGCGGTCTTGCCACGTCCTCACTaGCACTTCTGGAAAAGCAGCGTCTCAGCCCCCGTT +
Preference number: 6 (lower is better)
Translates to: KRTSEAVLPRPH*HFWKSSVSAPV
Trigger: AACGGGGGCTGAGACGCTGCTTTTCCAGAAGTGCCAGTGAGGACGTGGCAAGACCGCCTCGGACGTACGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS GCA 72 bp GATTTCCTTTGCAGTTTCGTCTGCACACGCCGCGAATaGAGGGCTCCAGCCAGATGCGGTAAGCGGTCTCGA +
Preference number: 6 (lower is better)
Translates to: DFLCSFVCTRRE*RAPARCGKRSR
Trigger: TCGAGACCGCTTACCGCATCTGGCTGGAGCCCTGCATTCGCGGCGTGTGCAGACGAAACTGCAAAGGAAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
ENST00000489108.1
ENST00000529637.5
ENST00000532737.1
CDS CCA 72 bp TCACCATCTTGCTCATCCAGCTGTTCAAGAGCTAGCTaGCGCCAACTCCGCAAGGAGGACTTCCCCACCCAA +
Preference number: 6 (lower is better)
Translates to: SPSCSSSCSRAS*RQLRKEDFPTQ
Trigger: TTGGGTGGGGAAGTCCTCCTTGCGGAGTTGGCGCCAGCTAGCTCTTGAACAGCTGGATGAGCAAGATGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000487880.2
ENST00000529637.5
CDS GCA 72 bp GGCGGCGCACTACGTACCACTACTCTAACAAACCAGTaGCTCGAAAGCTATTTCTTGCCTCCGGTACTTCCC +
Preference number: 6 (lower is better)
Translates to: GGALRTTTLTNQ*LESYFLPPVLP
Trigger: GGGAAGTACCGGAGGCAAGAAATAGCTTTCGAGGCACTGGTTTGTTAGAGTAGTGGTACGTAGTGCGCCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS GCA 72 bp CTTGGATGCCGTCTCCCAGCATGTAGTCACTACAAGTaGTTGGACATAAGTAGAGTGCCTGCCGAAGCTCCA +
Preference number: 6 (lower is better)
Translates to: LGCRLPACSHYK*LDISRVPAEAP
Trigger: TGGAGCTTCGGCAGGCACTCTACTTATGTCCAAGCACTTGTAGTGACTACATGCTGGGAGACGGCATCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
ENST00000527823.5
ENST00000529637.5
ENST00000532737.1
CDS CCA 72 bp TTGACTAGTTTCCCTGGAGAGAAATCCCTTCCCACCTaGGGGAGGGTAAGTAATGGGCTGCCCGAATTTGAG +
Preference number: 6 (lower is better)
Translates to: LTSFPGEKSLPT*GRVSNGLPEFE
Trigger: CTCAAATTCGGGCAGCCCATTACTTACCCTCCCCCAGGTGGGAAGGGATTTCTCTCCAGGGAAACTAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464577.1
CDS CAA 72 bp TGCTCACCAATACCAACCAAGCAATTCGGATTTCCTTaGCAGTTTCGTCTGCACACGCCGCGAATGCAGGGC +
Preference number: 6 (lower is better)
Translates to: CSPIPTKQFGFP*QFRLHTPRMQG
Trigger: GCCCTGCATTCGCGGCGTGTGCAGACGAAACTGCAAAGGAAATCCGAATTGCTTGGTTGGTATTGGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
ENST00000489108.1
ENST00000529637.5
ENST00000532737.1
CDS CAA 72 bp GGATGCCGTCTCCCAGCATGTAGTCACTACAAGTGCTaGGACATAAGTAGAGTGCCTGCCGAAGCTCCAAGT +
Preference number: 6 (lower is better)
Translates to: GCRLPACSHYKC*DISRVPAEAPS
Trigger: ACTTGGAGCTTCGGCAGGCACTCTACTTATGTCCAAGCACTTGTAGTGACTACATGCTGGGAGACGGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
ENST00000527823.5
ENST00000529637.5
ENST00000532737.1
CDS CAA 72 bp GTGTGCCTGTCTGGGGCACTGCAATCTGACTTAGTTTaGCTTCTTGTTGACCTCCTCCACAGGCAGAGCTCA +
Preference number: 6 (lower is better)
Translates to: VCLSGALQSDLV*LLVDLLHRQSS
Trigger: TGAGCTCTGCCTGTGGAGGAGGTCAACAAGAAGCAAAACTAAGTCAGATTGCAGTGCCCCAGACAGGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464577.1
CDS CAA 72 bp AGAAACCAGTGTTGGCTCTTTAGAGGGAGATTTAACTaGAGCCTAGACCGGTTCCGAACCCCTTTCCCGAGC +
Preference number: 6 (lower is better)
Translates to: RNQCWLFRGRFN*SLDRFRTPFPS
Trigger: GCTCGGGAAAGGGGTTCGGAACCGGTCTAGGCTCAAGTTAAATCTCCCTCTAAAGAGCCAACACTGGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421625.6
CDS GCA 72 bp GCCAGAATAAGCACTCACTCCTCTGTGTATGAGGACTaGGCTGAGTTCATACACGTAGGACCCACCTTTATG +
Preference number: 6 (lower is better)
Translates to: ARISTHSSVYED*AEFIHVGPTFM
Trigger: CATAAAGGTGGGTCCTACGTGTATGAACTCAGCGCAGTCCTCATACACAGAGGAGTGAGTGCTTATTCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308271.14
ENST00000374730.2
ENST00000400301.5
ENST00000421625.6
ENST00000529637.5
CDS GCA 72 bp TTCATCTTTCCGTTGCTTTGTTCTGCATCACCATCTTaGTCATCCAGCTGTTCAAGAGCTAGCTGGCGCCAA +
Preference number: 6 (lower is better)
Translates to: FIFPLLCSASPS*SSSCSRASWRQ
Trigger: TTGGCGCCAGCTAGCTCTTGAACAGCTGGATGAGCAAGATGGTGATGCAGAACAAAGCAACGGAAAGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000471752.1
ENST00000487880.2
ENST00000529637.5
CDS CCA 72 bp AATGGGCTGCCCGAATTTGAGCAAAGGGCTAAGAGATaGTCTCCTATTTGGTATAGGCTTCGTTCCCACCTT +
Preference number: 6 (lower is better)
Translates to: NGLPEFEQRAKR*SPIWYRLRSHL
Trigger: AAGGTGGGAACGAAGCCTATACCAAATAGGAGACCATCTCTTAGCCCTTTGCTCAAATTCGGGCAGCCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464577.1
CDS TCA 72 bp CTCCTCCCATTCCCAAGTTCTGGAAGGAGTCACTTTTaGCTCACACAGCAGCTTCTTCTGGTATTTAGCCTA +
Preference number: 6 (lower is better)
Translates to: LLPFPSSGRSHF*LTQQLLLVFSL
Trigger: TAGGCTAAATACCAGAAGAAGCTGCTGTGTGAGTCAAAAGTGACTCCTTCCAGAACTTGGGAATGGGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479177.1
CDS TCA 72 bp CGATGTAGAGGACATCCGTATCCTCTGGCCAGTTACTaGGACACGGTCTGTTTTTATCCTGGAACAAATTTG +
Preference number: 6 (lower is better)
Translates to: RCRGHPYPLASY*DTVCFYPGTNL
Trigger: CAAATTTGTTCCAGGATAAAAACAGACCGTGTCTCAGTAACTGGCCAGAGGATACGGATGTCCTCTACATCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000529637.5
CDS TCA 72 bp CTGTGCACCATAATGCTGAGTCTGCACAGTGCCCTATaGGATCGGCTGGTATTATTAACCACATTCTACAAG +
Preference number: 6 (lower is better)
Translates to: LCTIMLSLHSAL*DRLVLLTTFYK
Trigger: CTTGTAGAATGTGGTTAATAATACCAGCCGATCTCATAGGGCACTGTGCAGACTCAGCATTATGGTGCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS TCA 72 bp GCAGTTTCGTTGTTAAAGTCAGATTTACCCTCCTTGTaGGACAGACGCCCAGAGCTTGGACTTATTCGTTTG +
Preference number: 6 (lower is better)
Translates to: AVSLLKSDLPSL*DRRPELGLIRL
Trigger: CAAACGAATAAGTCCAAGCTCTGGGCGTCTGTCTCACAAGGAGGGTAAATCTGACTTTAACAACGAAACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527823.5
CDS CCA 72 bp ACAGCACTCTTTGTAACTTGGAAACTCAGGAGCCTTTaGAAAGTACTGCTGCAGTTTGCTCCAAGCCTCTTT +
Preference number: 6 (lower is better)
Translates to: TALFVTWKLRSL*KVLLQFAPSLF
Trigger: AAAGAGGCTTGGAGCAAACTGCAGCAGTACTTTCCAAAGGCTCCTGAGTTTCCAAGTTACAAAGAGTGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000529637.5
CDS CAA 72 bp GGAAACTCAGGAGCCTTTGGAAAGTACTGCTGCAGTTaGCTCCAAGCCTCTTTAGAAACAAGCCTTCTTTCA +
Preference number: 6 (lower is better)
Translates to: GNSGAFGKYCCS*LQASLETSLLS
Trigger: TGAAAGAAGGCTTGTTTCTAAAGAGGCTTGGAGCAAACTGCAGCAGTACTTTCCAAAGGCTCCTGAGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000529637.5
CDS TCA 72 bp CAGGCAAGCGTGATTATCAATAGGTTTGGTAGGTGTTaGTTCATCCAACCACTTTTGCAGCCATTCCAGAGA +
Preference number: 6 (lower is better)
Translates to: QASVIINRFGRC*FIQPLLQPFQR
Trigger: TCTCTGGAATGGCTGCAAAAGTGGTTGGATGAATCAACACCTACCAAACCTATTGATAATCACGCTTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000487880.2
ENST00000526044.5
ENST00000529637.5
ENST00000534705.5
CDS TCA 72 bp TTGCAGCCATTCCAGAGAGACAAACTCATAGGGCTCTaGGAAAGCAAGCATCGGAAAGAGCCTATGTATTTT +
Preference number: 6 (lower is better)
Translates to: LQPFQRDKLIGL*ESKHRKEPMYF
Trigger: AAAATACATAGGCTCTTTCCGATGCTTGCTTTCTCAGAGCCCTATGAGTTTGTCTCTCTGGAATGGCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS CAA 72 bp CTGGGCCATATGAGAGCTATAAGTTTAGAATCTTCTTaGGTCATGGAAGCAAATGTAAACATGAGGCCCCCG +
Preference number: 6 (lower is better)
Translates to: LGHMRAISLESS*VMEANVNMRPP
Trigger: CGGGGGCCTCATGTTTACATTTGCTTCCATGACCAAAGAAGATTCTAAACTTATAGCTCTCATATGGCCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000529637.5
CDS CAA 72 bp TTTATTATCCACAACTTTATGGACATAGATGGTGGCTaGAGTGTATTCACGCAGGTCCCTCTGCTGCTGACA +
Preference number: 6 (lower is better)
Translates to: FIIHNFMDIDGG*SVFTQVPLLLT
Trigger: TGTCAGCAGCAGAGGGACCTGCGTGAATACACTCAAGCCACCATCTATGTCCATAAAGTTGTGGATAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000529637.5
CDS CAA 90 bp CTTCTCTTTCTAAAATCTTGCACTGTGAACAGCACTCTTTGTAACTaGGAAACTCAGGAGCCTTTGGAAAGTACTGCTGCAGTTTGCTCC +
Preference number: 6 (lower is better)
Translates to: LLFLKSCTVNSTLCN*ETQEPLESTAAVCS
Trigger: GGAGCAAACTGCAGCAGTACTTTCCAAAGGCTCCTGAGTTTCCAAGTTACAAAGAGTGCTGTTCACAGTGCAAGATTTTAGAAAGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000529637.5
CDS CAA 90 bp AGACAATGCAAACTCTGTCCAGAGTTAGCAGAATCAGAAGAATCATaGTCTGGGGGAAGATGTTTGATGAGTACGACACAAAGCTCCAGT +
Preference number: 6 (lower is better)
Translates to: RQCKLCPELAESEES*SGGRCLMSTTQSSS
Trigger: ACTGGAGCTTTGTGTCGTACTCATCAAACATCTTCCCCCAGACAATGATTCTTCTGATTCTGCTAACTCTGGACAGAGTTTGCATTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS TCA 72 bp TTGTCCAGTGTCCAGGCCCAAGGCTTTAACAAATCCTaGTGGATCAATGTATCGCCTATTACTGTTTTGCAA +
Preference number: 6 (lower is better)
Translates to: LSSVQAQGFNKS*WINVSPITVLQ
Trigger: TTGCAAAACAGTAATAGGCGATACATTGATCCATCAGGATTTGTTAAAGCCTTGGGCCTGGACACTGGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
ENST00000529637.5
CDS CCA 72 bp TCACCTTTTTATTATCCACAACTTTATGGACATAGATaGTGGCTTGAGTGTATTCACGCAGGTCCCTCTGCT +
Preference number: 6 (lower is better)
Translates to: SPFYYPQLYGHR*WLECIHAGPSA
Trigger: AGCAGAGGGACCTGCGTGAATACACTCAAGCCACCATCTATGTCCATAAAGTTGTGGATAATAAAAAGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000529637.5
CDS CAA 72 bp CTAAAATCTTGCACTGTGAACAGCACTCTTTGTAACTaGGAAACTCAGGAGCCTTTGGAAAGTACTGCTGCA +
Preference number: 6 (lower is better)
Translates to: LKSCTVNSTLCN*ETQEPLESTAA
Trigger: TGCAGCAGTACTTTCCAAAGGCTCCTGAGTTTCCAAGTTACAAAGAGTGCTGTTCACAGTGCAAGATTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000529637.5
CDS TCA 72 bp TGGACAGAGTTTGGGCTCAGAAATATACTGTGTTTCTaGAGGGTTTACATCTCCCACTTCAATTCTCGTGAT +
Preference number: 6 (lower is better)
Translates to: WTEFGLRNILCF*RVYISHFNSRD
Trigger: ATCACGAGAATTGAAGTGGGAGATGTAAACCCTTCAGAAACACAGTATATTTCTGAGCCCAAACTCTGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000529637.5
CDS TCA 72 bp TCCTTCATCACTGGGCTCAGAAATATACTGTGTTTCTaGAGGGTTTACATCTCCCACTTCAATTCTCGTGAT +
Preference number: 6 (lower is better)
Translates to: SFITGLRNILCF*RVYISHFNSRD
Trigger: ATCACGAGAATTGAAGTGGGAGATGTAAACCCTTCAGAAACACAGTATATTTCTGAGCCCAGTGATGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464577.1
CDS CAA 90 bp CAGCTCCTTAACCTCTTCGTGTTTTGCTTTTCCTTTATCCACACTTaGCTTACGCATCTCAGCCATTTCAATACACCACTCCTCAAATTT +
Preference number: 6 (lower is better)
Translates to: QLLNLFVFCFSFIHT*LTHLSHFNTPLLKF
Trigger: AAATTTGAGGAGTGGTGTATTGAAATGGCTGAGATGCGTAAGCAAAGTGTGGATAAAGGAAAAGCAAAACACGAAGAGGTTAAGGAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
ENST00000526044.5
ENST00000529637.5
ENST00000534705.5
CDS CAA 90 bp TCCAGGTGGAGATGGGGAAGTGACAAGGATGTGAAAGGTAGAGAGTaGTCTAACTGCTTCTTATACAGTTTTCCAAACAAGTATCATGTT +
Preference number: 6 (lower is better)
Translates to: SRWRWGSDKDVKGRE*SNCFLYSFPNKYHV
Trigger: AACATGATACTTGTTTGGAAAACTGTATAAGAAGCAGTTAGACAACTCTCTACCTTTCACATCCTTGTCACTTCCCCATCTCCACCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464577.1
CDS TCA 72 bp GACTATGACCACACTTCAGAAGACGCTTTTAACCACTaGACTTTCTTCATCCAAGATGATACTGATGGCAAT +
Preference number: 6 (lower is better)
Translates to: DYDHTSEDAFNH*TFFIQDDTDGN
Trigger: ATTGCCATCAGTATCATCTTGGATGAAGAAAGTTCAGTGGTTAAAAGCGTCTTCTGAAGTGTGGTCATAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS GCA 72 bp AATCCTGATGGATCAATGTATCGCCTATTACTGTTTTaGAACAAGGCAAACAAGTACTGGAGATGCTCACAA +
Preference number: 6 (lower is better)
Translates to: NPDGSMYRLLLF*NKANKYWRCSQ
Trigger: TTGTGAGCATCTCCAGTACTTGTTTGCCTTGTTGCAAAACAGTAATAGGCGATACATTGATCCATCAGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
ENST00000527823.5
ENST00000529637.5
CDS GCA 72 bp TTCTTCTGGCATACAAACTTGCATGACATCATCCATTaGAGCATAATCTGCAATTGGTTCATCAGCCTTCAA +
Preference number: 6 (lower is better)
Translates to: FFWHTNLHDIIH*SIICNWFISLQ
Trigger: TTGAAGGCTGATGAACCAATTGCAGATTATGCTGCAATGGATGATGTCATGCAAGTTTGTATGCCAGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000529637.5
CDS CCA 72 bp ACTGAGACACGGTCTGTTTTTATCCTGGAACAAATTTaGGAGAGAAGTCTTTTGCTCGTTTGCAATCATCTT +
Preference number: 6 (lower is better)
Translates to: TETRSVFILEQI*ERSLLLVCNHL
Trigger: AAGATGATTGCAAACGAGCAAAAGACTTCTCTCCCAAATTTGTTCCAGGATAAAAACAGACCGTGTCTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000529637.5
CDS CAA 72 bp CCTGGAACAAATTTGGGAGAGAAGTCTTTTGCTCGTTaGCAATCATCTTATGTAAGGCTTCATTTTCTTCCC +
Preference number: 6 (lower is better)
Translates to: PGTNLGEKSFAR*QSSYVRLHFLP
Trigger: GGGAAGAAAATGAAGCCTTACATAAGATGATTGCAAACGAGCAAAAGACTTCTCTCCCAAATTTGTTCCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000529637.5
CDS CAA 72 bp AATTACATGATCCACAACAAAGAGCTTTTGTATCATTaGCCACTCACTGGGCCATATGAGAGCTATACTGTG +
Preference number: 6 (lower is better)
Translates to: NYMIHNKELLYH*PLTGPYESYTV
Trigger: CACAGTATAGCTCTCATATGGCCCAGTGAGTGGCAAATGATACAAAAGCTCTTTGTTGTGGATCATGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464577.1
CDS CAA 90 bp CTGGTTGCAAACAGTTACATAGGCATATTCTCCACAGAACTGCTGTaGAACAATATTGCGCACATCTGGATTCTTTTGTTTAGACAAAGT +
Preference number: 6 (lower is better)
Translates to: LVANSYIGIFSTELL*NNIAHIWILLFRQS
Trigger: ACTTTGTCTAAACAAAAGAATCCAGATGTGCGCAATATTGTTCAACAGCAGTTCTGTGGAGAATATGCCTATGTAACTGTTTGCAACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
ENST00000529637.5
CDS GCA 72 bp TATAATCTTCATTTAGTTGGTTCTTCAGACGCAATATaGGACAACGTTCTACTACACATTCCTTACACAGGG +
Preference number: 6 (lower is better)
Translates to: YNLHLVGSSDAI*DNVLLHIPYTG
Trigger: CCCTGTGTAAGGAATGTGTAGTAGAACGTTGTCGCATATTGCGTCTGAAGAACCAACTAAATGAAGATTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000487880.2
ENST00000529637.5
CDS CAA 72 bp AAGAAGTCGAATCTTTCTTGTTGCATTCTGTTTGCTTaGACAGTTCTCGCAAAAATAGCGATTGTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: KKSNLSCCILFA*TVLAKIAIVSF
Trigger: GAAGGAGACAATCGCTATTTTTGCGAGAACTGTCAAAGCAAACAGAATGCAACAAGAAAGATTCGACTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000400301.5
ENST00000421625.6
ENST00000529637.5
CDS CAA 90 bp TCGCATACTTCGGCGAATAACTTGCTTTTGATAGGCTATATAATTTaGATGGGATATCTTTTGCCGCTTTGTTCCACCATTGCTTTGATT +
Preference number: 6 (lower is better)
Translates to: SHTSANNLLLIGYII*MGYLLPLCSTIALI
Trigger: AATCAAAGCAATGGTGGAACAAAGCGGCAAAAGATATCCCATCAAAATTATATAGCCTATCAAAAGCAAGTTATTCGCCGAAGTATGCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000464577.1
ENST00000529637.5
CDS CAA 90 bp TTCAATTCTCGTGATTTTAATTACATGATCCACAACAAAGAGCTTTaGTATCATTTGCCACTCACTGGGCCATATGAGAGCTATACTGTG +
Preference number: 6 (lower is better)
Translates to: FNSRDFNYMIHNKEL*YHLPLTGPYESYTV
Trigger: CACAGTATAGCTCTCATATGGCCCAGTGAGTGGCAAATGATACAAAAGCTCTTTGTTGTGGATCATGTAATTAAAATCACGAGAATTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464577.1
CDS CAA 72 bp AATTACATGATCCACAACAAAGAGCTTTTGTATCATTaGCCACTCACTGGGCCATATGAGAGCTATAAGTTT +
Preference number: 6 (lower is better)
Translates to: NYMIHNKELLYH*PLTGPYESYKF
Trigger: AAACTTATAGCTCTCATATGGCCCAGTGAGTGGCAAATGATACAAAAGCTCTTTGTTGTGGATCATGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000529637.5
CDS CAA 72 bp TCGGCGAATAACTTGCTTTTGATAGGCTATATAATTTaGATGGGATATCTTTTGCCGCTTTGTTCCACCATT +
Preference number: 6 (lower is better)
Translates to: SANNLLLIGYII*MGYLLPLCSTI
Trigger: AATGGTGGAACAAAGCGGCAAAAGATATCCCATCAAAATTATATAGCCTATCAAAAGCAAGTTATTCGCCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308271.14
ENST00000464577.1
ENST00000529637.5
CDS CAA 72 bp GAACTTTCTTCATCCAAGATGATACTGATGGCAATTTaGAAAAGGTATTTAATTCCCCCACCCAAATCCAAG +
Preference number: 6 (lower is better)
Translates to: ELSSSKMILMAI*KRYLIPPPKSK
Trigger: CTTGGATTTGGGTGGGGGAATTAAATACCTTTTCAAAATTGCCATCAGTATCATCTTGGATGAAGAAAGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374732.7
CDS CAA 90 bp CGTGATTTTAATTACATGATCCACAACAAAGAGCTTTTGTATCATTaGCCACTCACTGGGCCATATGAGAGCTATAAGTTTAGAATCTTC +
Preference number: 6 (lower is better)
Translates to: RDFNYMIHNKELLYH*PLTGPYESYKFRIF
Trigger: GAAGATTCTAAACTTATAGCTCTCATATGGCCCAGTGAGTGGCAAATGATACAAAAGCTCTTTGTTGTGGATCATGTAATTAAAATCACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000529637.5
CDS CAA 90 bp TTCAATTCTCGTGATTTTAATTACATGATCCACAACAAAGAGCTTTaGTATCATTTGCCACTCACTGGGCCATATGAGAGCTATAAGTTT +
Preference number: 6 (lower is better)
Translates to: FNSRDFNYMIHNKEL*YHLPLTGPYESYKF
Trigger: AAACTTATAGCTCTCATATGGCCCAGTGAGTGGCAAATGATACAAAAGCTCTTTGTTGTGGATCATGTAATTAAAATCACGAGAATTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000529637.5
CDS TCA 72 bp ACATCTCCCACTTCAATTCTCGTGATTTTAATTACATaGTCCACAACAAAGAGCTTTTGTATCATTTGCCAC +
Preference number: 6 (lower is better)
Translates to: TSPTSILVILIT*STTKSFCIICH
Trigger: GTGGCAAATGATACAAAAGCTCTTTGTTGTGGATCATGTAATTAAAATCACGAGAATTGAAGTGGGAGATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308271.14
ENST00000374732.7
ENST00000400301.5
ENST00000464577.1
ENST00000529637.5
CDS GCA 72 bp AGTGACAAGGATGTGAAAGGTAGAGAGTTGTCTAACTaGTTCTTATACAGTTTTCCAAACAAGTATCATGTT +
Preference number: 6 (lower is better)
Translates to: SDKDVKGRELSN*FLYSFPNKYHV
Trigger: AACATGATACTTGTTTGGAAAACTGTATAAGAAGCAGTTAGACAACTCTCTACCTTTCACATCCTTGTCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464577.1
CDS TCA 72 bp TTTATGTTCCACATAAGGCTCCATATCCAAAATTTCTaGGAAGCCAATGTAGGTATTCAGCTTTTTCTTATG +
Preference number: 6 (lower is better)
Translates to: FMFHIRLHIQNF*EANVGIQLFLM
Trigger: CATAAGAAAAAGCTGAATACCTACATTGGCTTCTCAGAAATTTTGGATATGGAGCCTTATGTGGAACATAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308271.14
ENST00000374730.2
ENST00000400301.5
ENST00000421625.6
ENST00000529637.5