RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP47 (Homo sapiens)

Ensembl gene IDs: ENSG00000170242

Ensembl transcript IDs: ENST00000305481.10, ENST00000339865.9, ENST00000399455.2, ENST00000525078.1, ENST00000525257.1, ENST00000525367.1, ENST00000527733.7, ENST00000529813.1, ENST00000530041.5, ENST00000530369.1, ENST00000531513.5

Found 914 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TATGGTGCTCAGGAAGCGACATTTGGCTCTGGGGCAGCCATCTGGTaGTCATGTGATCAACAGGGCTGCATTCCTCTGGAGGCTCTGGGG +
Preference number: 1 (lower is better)
Translates to: YGAQEATFGSGAAIW*SCDQQGCIPLEALG
Trigger: CCCCAGAGCCTCCAGAGGAATGCAGCCCTGTTGATCACATGATCACCAGATGGCTGCCCCAGAGCCAAATGTCGCTTCCTGAGCACCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR TCA 90 bp CTCAACAGCTGTTCTCAGTCCCTCCAGCAGCTAGGGCTGGCCCCATaGCCCAGGAAATGTAAGGGGAGGGCTCCCAGAGTTTCTGGAATT +
Preference number: 1 (lower is better)
Translates to: LNSCSQSLQQLGLAP*PRKCKGRAPRVSGI
Trigger: AATTCCAGAAACTCTGGGAGCCCTCCCCTTACATTTCCTGGGTCATGGGGCCAGCCCTAGCTGCTGGAGGGACTGAGAACAGCTGTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR GCA 90 bp TGCTGCTCTCTCCCAAAGCCAGAGTTCCTGCCAAGCCATGGCAGATaGCGTCAGGTAAACTGCTCAACAGCTGTTCTCAGTCCCTCCAGC +
Preference number: 1 (lower is better)
Translates to: CCSLPKPEFLPSHGR*RQVNCSTAVLSPSS
Trigger: GCTGGAGGGACTGAGAACAGCTGTTGAGCAGTTTACCTGACGGCATCTGCCATGGCTTGGCAGGAACTCTGGCTTTGGGAGAGAGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR GCA 90 bp CCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAGTCCAATCAGTaGTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGC +
Preference number: 1 (lower is better)
Translates to: PLGTELLIGVGQSNQ*WCHWVTPTMSGQNG
Trigger: GCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTGATTGGACTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CCA 90 bp GAGCTTCTGATTGGTGTAGGGCAGTCCAATCAGTGCTGGTGTCACTaGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCCAGTGG +
Preference number: 1 (lower is better)
Translates to: ELLIGVGQSNQCWCH*VTPTMSGQNGTTQW
Trigger: CCACTGGGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTGATTGGACTGCCCTACACCAATCAGAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR GCA 90 bp GTCACTGGCATTCCTTGGCTCATGGGCCCCTTCATCTTCAAATCCTaGAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTT +
Preference number: 1 (lower is better)
Translates to: VTGIPWLMGPFIFKS*NDSSVLLRCQLSGF
Trigger: AAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGAGCCAAGGAATGCCAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CCA 90 bp ACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGGTaGGAAAGGTTCTCCACTTCTGGGGACCCATGTGATCAAATTGCG +
Preference number: 1 (lower is better)
Translates to: TVLSFSGASSLAFYR*ERFSTSGDPCDQIA
Trigger: CGCAATTTGATCACATGGGTCCCCAGAAGTGGAGAACCTTTCCCACCTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR TCA 90 bp AGTGCACAACATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTaGGCTTCTGATTGGTGTAGGGCAGTCCAATCAGTGCTGGTGTCA +
Preference number: 1 (lower is better)
Translates to: SAQHDSESKQWPIGH*ASDWCRAVQSVLVS
Trigger: TGACACCAGCACTGATTGGACTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCATGTTGTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR TCA 90 bp GAAACCACAGCTTTTGTTTCTTTGGCCAGAATGCACCCCTCACCTTaGGTGCCCGCCTTAGAAACACAGGTACTTGGTTCTCACAGGGTG +
Preference number: 1 (lower is better)
Translates to: ETTAFVSLARMHPSP*VPALETQVLGSHRV
Trigger: CACCCTGTGAGAACCAAGTACCTGTGTTTCTAAGGCGGGCACTCAAGGTGAGGGGTGCATTCTGGCCAAAGAAACAAAAGCTGTGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR TCA 90 bp CTTACATACACGTCCCGTACAGATCAGCTACACACGGCATGGTCCTaGAACCACAGCTTTTGTTTCTTTGGCCAGAATGCACCCCTCACC +
Preference number: 1 (lower is better)
Translates to: LTYTSRTDQLHTAWS*NHSFCFFGQNAPLT
Trigger: GGTGAGGGGTGCATTCTGGCCAAAGAAACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACGTGTATGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR TCA 90 bp TGGCATTCCTTGGCTCATGGGCCCCTTCATCTTCAAATCCTGCAATaGCAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACA +
Preference number: 1 (lower is better)
Translates to: WHSLAHGPLHLQILQ*QFCPSQVPALWLST
Trigger: TGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGAGCCAAGGAATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR GCA 90 bp CCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTaGCAGCTCTCTGGCTTTCTACAGGTGGGAAAGGTTCTCCACTTC +
Preference number: 1 (lower is better)
Translates to: PFIFKSCNDSSVLLR*QLSGFLQVGKVLHF
Trigger: GAAGTGGAGAACCTTTCCCACCTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CCA 90 bp GGGATAGTGGTATTCACTGCAGAGAAGTGTCTGCCAGCAGGAGGCTaGCAAGACACTGTCAAATTTCATGAGGGAGCACCAATGCTGTTA +
Preference number: 1 (lower is better)
Translates to: GIVVFTAEKCLPAGG*QDTVKFHEGAPMLL
Trigger: TAACAGCATTGGTGCTCCCTCATGAAATTTGACAGTGTCTTGCCAGCCTCCTGCTGGCAGACACTTCTCTGCAGTGAATACCACTATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CCA 90 bp AAGATCAAATTGAGGGTTGAAGACTTGGTAGGGACTAGTGCAGCATaGGATAGTGGTATTCACTGCAGAGAAGTGTCTGCCAGCAGGAGG +
Preference number: 1 (lower is better)
Translates to: KIKLRVEDLVGTSAA*DSGIHCREVSASRR
Trigger: CCTCCTGCTGGCAGACACTTCTCTGCAGTGAATACCACTATCCCATGCTGCACTAGTCCCTACCAAGTCTTCAACCCTCAATTTGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR TCA 90 bp CTAAACCTAGGTGGCCACAAGCTTCATTTGGGCCATGAACTCCTTTaGAACCCTCATAAAAACTGTCCTACTATCTCCCTGGTAAATCGC +
Preference number: 1 (lower is better)
Translates to: LNLGGHKLHLGHELL*NPHKNCPTISLVNR
Trigger: GCGATTTACCAGGGAGATAGTAGGACAGTTTTTATGAGGGTTTCAAAGGAGTTCATGGCCCAAATGAAGCTTGTGGCCACCTAGGTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR GCA 90 bp TCTAGTGTGAAGGCTGCTTCACACACTGTTCTTATCTATCATGATTaGTCTTCCTTACATACACGTCCCGTACAGATCAGCTACACACGG +
Preference number: 1 (lower is better)
Translates to: SSVKAASHTVLIYHD*SSLHTRPVQISYTR
Trigger: CCGTGTGTAGCTGATCTGTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGAAGCAGCCTTCACACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CCA 90 bp CCGCTGAACAGAGAAACCTCATTAACAAGGGCAACGACAATCCTATaGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTTACATA +
Preference number: 1 (lower is better)
Translates to: PLNRETSLTRATTIL*DLALRNLTEDYIYI
Trigger: TATGTAAATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTCTCTGTTCAGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CCA 90 bp ATTCCCTTGGCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATaGAAGATCAAATTGAGGGTTGAAGACTTGGTAGGGACTAGTGCA +
Preference number: 1 (lower is better)
Translates to: IPLAETSEGNFLRHS*KIKLRVEDLVGTSA
Trigger: TGCACTAGTCCCTACCAAGTCTTCAACCCTCAATTTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR TCA 90 bp CATAACTTAAGTACAATCAGTTATAATTACAACACTGCAGCAATCTaGGCTGCCACCTGCTGGGATCGGTCTAAGGGAAACGTTCTGATG +
Preference number: 1 (lower is better)
Translates to: HNLSTISYNYNTAAI*AATCWDRSKGNVLM
Trigger: CATCAGAACGTTTCCCTTAGACCGATCCCAGCAGGTGGCAGCTCAGATTGCTGCAGTGTTGTAATTATAACTGATTGTACTTAAGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR TCA 90 bp AAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTaGGGATTACATTTACATAGATTGCTATACTTCTCAATGTACACA +
Preference number: 1 (lower is better)
Translates to: KGNDNPMGPSTEEPH*GLHLHRLLYFSMYT
Trigger: TGTGTACATTGAGAAGTATAGCAATCTATGTAAATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR GCA 90 bp AAACCCAATCAGACCAAACTCCAAAGCCCATTGTGTTTACAAGTCTaGCTCTTTTGTGTGATAGCAAGTCAGTCCTTTAAAGCAGAAACC +
Preference number: 1 (lower is better)
Translates to: KPNQTKLQSPLCLQV*LFCVIASQSFKAET
Trigger: GGTTTCTGCTTTAAAGGACTGACTTGCTATCACACAAAAGAGGCAGACTTGTAAACACAATGGGCTTTGGAGTTTGGTCTGATTGGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR TCA 90 bp ATTGTCTTAATAATGCAAAATGACTTAAAAGTCACAGGATTGCACTaGGCACTTGATAAGCCCACTGCCCAGTGGGTAACTGCATTTGAC +
Preference number: 1 (lower is better)
Translates to: IVLIMQNDLKVTGLH*ALDKPTAQWVTAFD
Trigger: GTCAAATGCAGTTACCCACTGGGCAGTGGGCTTATCAAGTGCTCAGTGCAATCCTGTGACTTTTAAGTCATTTTGCATTATTAAGACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR GCA 90 bp CCATACATTCACAGGTCACTTCCAGATTTAGTAACAACACTGCAATaGTATGATGCTGTGCGGTCATTTAGCTTAAACCACAGTGTAAGT +
Preference number: 1 (lower is better)
Translates to: PYIHRSLPDLVTTLQ*YDAVRSFSLNHSVS
Trigger: ACTTACACTGTGGTTTAAGCTAAATGACCGCACAGCATCATAGCATTGCAGTGTTGTTACTAAATCTGGAAGTGACCTGTGAATGTATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CCA 90 bp CTCTTGGCCTCTAGATGTATCACAATACAATTCCTAACTGTGGCCTaGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACA +
Preference number: 1 (lower is better)
Translates to: LLASRCITIQFLTVA*QPMLISLDYFLTGT
Trigger: TGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGTGATACATCTAGAGGCCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CCA 90 bp AAATGCAATTCAACTATTTGGAGATTACTTTTTGATAGCTATGCTTaGTTTCTAAATGCAGCTAGGCCCCTGCACACAGGGCTTGCTGAA +
Preference number: 1 (lower is better)
Translates to: KCNSTIWRLLFDSYA*FLNAARPLHTGLAE
Trigger: TTCAGCAAGCCCTGTGTGCAGGGGCCTAGCTGCATTTAGAAACCAAGCATAGCTATCAAAAAGTAATCTCCAAATAGTTGAATTGCATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CCA 90 bp TGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTaGGACATGAGTTCATCGCATCTTCCCAGAATTTTAAAGTACCTT +
Preference number: 1 (lower is better)
Translates to: CGLATNAYFIGLFSD*DMSSSHLPRILKYL
Trigger: AAGGTACTTTAAAATTCTGGGAAGATGCGATGAACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR TCA 90 bp AATTCATTCATTCATGGCCTTTGCACAGCTTTTATTATTAAGCTATaGGCATCCTGTTTGAGGCTAGTTTTACTAGCGGCTATGTGCACA +
Preference number: 1 (lower is better)
Translates to: NSFIHGLCTAFIIKL*ASCLRLVLLAAMCT
Trigger: TGTGCACATAGCCGCTAGTAAAACTAGCCTCAAACAGGATGCTCATAGCTTAATAATAAAAGCTGTGCAAAGGCCATGAATGAATGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR GCA 90 bp GACCTAGCACTGAGGAACCTCACTGAGGATTACATTTACATAGATTaGTATACTTCTCAATGTACACAAATGTACAGAATGAATGATACG +
Preference number: 1 (lower is better)
Translates to: DLALRNLTEDYIYID*YTSQCTQMYRMNDT
Trigger: CGTATCATTCATTCTGTACATTTGTGTACATTGAGAAGTATAGCAATCTATGTAAATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR TCA 90 bp TTTCATTGTGGATTCCAGGAGACTTTTAAGACATGGAATTCTCGGTaGTTATATTCAAATGGCAGAGCCACATTTGCTAACAGTATTTTC +
Preference number: 1 (lower is better)
Translates to: FHCGFQETFKTWNSR*LYSNGRATFANSIF
Trigger: GAAAATACTGTTAGCAAATGTGGCTCTGCCATTTGAATATAATCACCGAGAATTCCATGTCTTAAAAGTCTCCTGGAATCCACAATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CAA 90 bp CGCTCTTCCTGGCCTCTTCCACCACCAGTCAAGCTGGTGCAGGAGTaGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCAGGGG +
Preference number: 2 (lower is better)
Translates to: RSSWPLPPPVKLVQE*AGTAHLGGTMEVQG
Trigger: CCCCTGAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTGCCAACTCCTGCACCAGCTTGACTGGTGGTGGAAGAGGCCAGGAAGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR GCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGTGCAGCAATCTGAGCTaGCACCTGCTGGGATCGGTC +
Preference number: 2 (lower is better)
Translates to: PGSGNLIHIARALPVRLWCSNLS*HLLGSV
Trigger: GACCGATCCCAGCAGGTGGCAGCTCAGATTGCTGCA...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGTGGCCCATTGGGCACTaGGCTTCTGATTGGTGTAGG +
Preference number: 2 (lower is better)
Translates to: PGSGNLIHIARALPVRLWWPIGH*ASDWCR
Trigger: CCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCA...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGGGGCAGTCCAATCAGTaGTGGTGTCACTGGGTTACC +
Preference number: 2 (lower is better)
Translates to: PGSGNLIHIARALPVRLWGQSNQ*WCHWVT
Trigger: GGTAACCCAGTGACACCAGCACTGATTGGACTGCCC...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CAA 90 bp AAGATAAGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTaGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGATGCTC +
Preference number: 2 (lower is better)
Translates to: KIRDHEAPPPPGSGN*IHIARALPVRLWML
Trigger: GAGCATCCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCTTATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CAA 90 bp CCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTaGTTTCTTTGGCCAGAATGCACCCCTCACCTTGAGTGCCCGCCT +
Preference number: 2 (lower is better)
Translates to: PYRSATHGMVLKPQL*FLWPECTPHLECPP
Trigger: AGGCGGGCACTCAAGGTGAGGGGTGCATTCTGGCCAAAGAAACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CAA 90 bp CACCACCAGTCAAGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTaGGAGGCACTATGGAGGTTCAGGGGAGCTTTGAATGAAACCACT +
Preference number: 2 (lower is better)
Translates to: HHQSSWCRSWQGQHI*EALWRFRGALNETT
Trigger: AGTGGTTTCATTCAAAGCTCCCCTGAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTGCCAACTCCTGCACCAGCTTGACTGGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR TCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTGCTCACCTGACTCTCTaGAGCAGAGGGAGGCTGACA +
Preference number: 2 (lower is better)
Translates to: RPVQISYTRHGPETTAFVAHLTL*SRGRLT
Trigger: TGTCAGCCTCCCTCTGCTTCAGAGAGTCAGGTGAGC...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTTGCAGCAATCTGAGCTaGCACCTGCTGGGATCGGTC +
Preference number: 2 (lower is better)
Translates to: RPVQISYTRHGPETTAFVCSNLS*HLLGSV
Trigger: GACCGATCCCAGCAGGTGGCAGCTCAGATTGCTGCA...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CCA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGCACCACCAGTCAAGCTaGTGCAGGAGTTGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQHHQSS*CRSWQG
Trigger: TCCCTGCCAACTCCTGCACCAGCTTGACTGGTGGTG...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTGAAGCAGAGGGAGGCTaGCACAGATTAGCTTTTATT +
Preference number: 2 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAEAEGG*HRLAFI
Trigger: AATAAAAGCTAATCTGTGTCAGCCTCCCTCTGCTTC...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTCAGGGTGTGCATGGTTaGCACAAGTTCATCTGCCCC +
Preference number: 2 (lower is better)
Translates to: RPVQISYTRHGPETTAFVQGVHG*HKFICP
Trigger: GGGGCAGATGAACTTGTGTCAACCATGCACACCCTG...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTCTGTTAGGTTATGGATaGTCACCTGACTCTCTGAAG +
Preference number: 2 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIALLGYG*SPDSLK
Trigger: CTTCAGAGAGTCAGGTGAGCATCCATAACCTAACAG...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTTTCACAATTCCTTACTaGGTTACGGCTGGTTCCAAG +
Preference number: 2 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAFTIPY*VTAGSK
Trigger: CTTGGAACCAGCCGTAACCCAGTAAGGAATTGTGAA...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGCATCAGTCTGTACCATaGCCTGACCTCATTAGCAAG +
Preference number: 2 (lower is better)
Translates to: PGSGNLIHIARALPVRLWHQSVP*PDLISK
Trigger: CTTGCTAATGAGGTCAGGTCATGGTACAGACTGATG...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp TCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTCTTGGTGCCCACCTGTaGGGCAAGGTTTTAGGGTCC +
Preference number: 2 (lower is better)
Translates to: SWAPSSSNPAMTVLSFSGLGAHL*GKVLGS
Trigger: GGACCCTAAAACCTTGCCTCACAGGTGGGCACCAAG...ACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTCTTCTGAATTGTCAATaGGGTAATGTGTGCATCAGT +
Preference number: 2 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIALLNCQ*GNVCIS
Trigger: ACTGATGCACACATTACCTCATTGACAATTCAGAAG...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTACTGAGGAACCTCACTaGGGATTACATTTACATAGA +
Preference number: 2 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIATEEPH*GLHLHR
Trigger: TCTATGTAAATGTAATCCTCAGTGAGGTTCCTCAGT...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTTTTCCAATTTTCTTCTaGGAACATCACCAATCCCAC +
Preference number: 2 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAFPIFF*EHHQSH
Trigger: GTGGGATTGGTGATGTTCTCAGAAGAAAATTGGAAA...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp TCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTCAGGGTGTGCATGGTTaGCACAAGTTCATCTGCCCC +
Preference number: 2 (lower is better)
Translates to: SWAPSSSNPAMTVLSFSGQGVHG*HKFICP
Trigger: GGGGCAGATGAACTTGTGTCAACCATGCACACCCTG...ACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR TCA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGCCAAACACTCTAGTGTaGAGGCTGCTTCACACACTG +
Preference number: 2 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQPNTLV*RLLHTL
Trigger: CAGTGTGTGAAGCAGCCTTCACACTAGAGTGTTTGG...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR GCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTACATCGCTAGGGCTCTaGCTGTTAGGTTATGGATGC +
Preference number: 2 (lower is better)
Translates to: RPVQISYTRHGPETTAFVTSLGL*LLGYGC
Trigger: GCATCCATAACCTAACAGGCAGAGCCCTAGCGATGT...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp AGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCCTTCTGAATTGTCAATaGGGTAATGTGTGCATCAGT +
Preference number: 2 (lower is better)
Translates to: SWCRSWQGQHILEALWRFLLNCQ*GNVCIS
Trigger: ACTGATGCACACATTACCTCATTGACAATTCAGAAG...GAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTGCCAACTCCTGCACCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR TCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTCATCAGTCTGTACCATaGCCTGACCTCATTAGCAAG +
Preference number: 2 (lower is better)
Translates to: RPVQISYTRHGPETTAFVHQSVP*PDLISK
Trigger: CTTGCTAATGAGGTCAGGTCATGGTACAGACTGATG...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTACATGGAATTCTCGGTaGTTATATTCAAATGGCAGA +
Preference number: 2 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIATWNSR*LYSNGR
Trigger: TCTGCCATTTGAATATAATCACCGAGAATTCCATGT...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCGGGCTCAGGAAACTTaGTCCACATCGCTAGGGCTC +
Preference number: 2 (lower is better)
Translates to: QFVACDLPQPQKIRDHEARAQET*STSLGL
Trigger: GAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGAGCTCCTGTTTTTGCTaGTTTCCAAGAGTCAACACA +
Preference number: 2 (lower is better)
Translates to: PGSGNLIHIARALPVRLWSSCFC*FPRVNT
Trigger: TGTGTTGACTCTTGGAAAGCAGCAAAAACAGGAGCT...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGTTCAGCTCCTGTTTTTaGTGCTTTCCAAGAGTCAAC +
Preference number: 2 (lower is better)
Translates to: PGSGNLIHIARALPVRLWFSSCF*CFPRVN
Trigger: GTTGACTCTTGGAAAGCAGCAAAAACAGGAGCTGAA...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGTTTGCTGATAGGACCTaGAGGGCATCTACCTTCATG +
Preference number: 2 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQFADRT*RASTFM
Trigger: CATGAAGGTAGATGCCCTGCAGGTCCTATCAGCAAA...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR CCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCAGTCCAATCAGTGCTaGTGTCACTGGGTTACCCCA +
Preference number: 2 (lower is better)
Translates to: ATTILWDLALRNLTEDYIQSNQC*CHWVTP
Trigger: TGGGGTAACCCAGTGACACCAGCACTGATTGGACTG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CAA 90 bp TTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCCCATaGGGCACTGAGCTTCTGATTGGTGTAGGGCAGTCCAATCAGTGC +
Preference number: 2 (lower is better)
Translates to: LTIVHNMIPSQNSGP*GTELLIGVGQSNQC
Trigger: GCACTGATTGGACTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CAA 90 bp CAGGGTTTAGGATGTGGCCCTACCACAGAAAGAGTCTTTGAGTCCTaGACATTGAGGAGGAAACCAATCCTGTTCTCCACCATCTCTGGA +
Preference number: 2 (lower is better)
Translates to: QGLGCGPTTERVFES*TLRRKPILFSTISG
Trigger: TCCAGAGATGGTGGAGAACAGGATTGGTTTCCTCCTCAATGTCAAGGACTCAAAGACTCTTTCTGTGGTAGGGCCACATCCTAAACCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTCGGGCTCAGGAAACTTaGTCCACATCGCTAGGGCTC +
Preference number: 2 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSRAQET*STSLGL
Trigger: GAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCG...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCGGGCTCAGGAAACTTaGTCCACATCGCTAGGGCTC +
Preference number: 2 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYRAQET*STSLGL
Trigger: GAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCG...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTAGATTCTTCCCCTCCCTaGCACTCCGTTGAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILDSSPP*HSVEGG
Trigger: TCCTCCCTCAACGGAGTGTCAGGGAGGGGAAGAATC...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR GCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTCTGTTAGGTTATGGATaGTCACCTGACTCTCTGAAG +
Preference number: 2 (lower is better)
Translates to: RPVQISYTRHGPETTAFVLLGYG*SPDSLK
Trigger: CTTCAGAGAGTCAGGTGAGCATCCATAACCTAACAG...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCAGTGCTGGTGTCACTaGGTTACCCCAACCATGTCC +
Preference number: 2 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAQCWCH*VTPTMS
Trigger: GGACATGGTTGGGGTAACCCAGTGACACCAGCACTG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTAGAAACACAGGTACTTaGTTCTCACAGGGTGTGCAT +
Preference number: 2 (lower is better)
Translates to: RPVQISYTRHGPETTAFVRNTGT*FSQGVH
Trigger: ATGCACACCCTGTGAGAACCAAGTACCTGTGTTTCT...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CCA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGCTCATTGCTAAGAAGTaGTTAGCACATGTCTTCCCC +
Preference number: 2 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQLIAKK*LAHVFP
Trigger: GGGGAAGACATGTGCTAACCACTTCTTAGCAATGAG...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CAA 90 bp TTAGGATGTGGCCCTACCACAGAAAGAGTCTTTGAGTCCTTGACATaGAGGAGGAAACCAATCCTGTTCTCCACCATCTCTGGACACCTT +
Preference number: 2 (lower is better)
Translates to: LGCGPTTERVFESLT*RRKPILFSTISGHL
Trigger: AAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTTTCCTCCTCAATGTCAAGGACTCAAAGACTCTTTCTGTGGTAGGGCCACATCCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTTGGCCCATTGGGCACTaGGCTTCTGATTGGTGTAGG +
Preference number: 2 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSWPIGH*ASDWCR
Trigger: CCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCA...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAGCTCACCTGACTCTCTaGAGCAGAGGGAGGCTGACA +
Preference number: 2 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVAHLTL*SRGRLT
Trigger: TGTCAGCCTCCCTCTGCTTCAGAGAGTCAGGTGAGC...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAAAAGATAAGAGATCATaGGGCTCCACCGCCCCCGGG +
Preference number: 2 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVKDKRS*GSTAPG
Trigger: CCCGGGGGCGGTGGAGCCTCATGATCTCTTATCTTT...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTAGGGCCTGCTGTAGTGTaGGGGACAAAGACAGGAAGA +
Preference number: 2 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILGPAVV*GTKTGR
Trigger: TCTTCCTGTCTTTGTCCCTCACACTACAGCAGGCCC...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR GCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACGGGCAGTCCAATCAGTaGTGGTGTCACTGGGTTACC +
Preference number: 2 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYGQSNQ*WCHWVT
Trigger: GGTAACCCAGTGACACCAGCACTGATTGGACTGCCC...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGTTCAGCTCCTGTTTTTaGTGCTTTCCAAGAGTCAAC +
Preference number: 2 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQFSSCF*CFPRVN
Trigger: GTTGACTCTTGGAAAGCAGCAAAAACAGGAGCTGAA...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR CCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCCAGTGCTGGTGTCACTaGGTTACCCCAACCATGTCC +
Preference number: 2 (lower is better)
Translates to: VIASQSFKAETPFTNPTSQCWCH*VTPTMS
Trigger: GGACATGGTTGGGGTAACCCAGTGACACCAGCACTG...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CCA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGGGAGATTGTGGTGTTTaGAAAACAGATTCTTCCCCT +
Preference number: 2 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQGDCGV*KTDSSP
Trigger: AGGGGAAGAATCTGTTTTCCAAACACCACAATCTCC...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR TCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTTTTCCAATTTTCTTCTaGGAACATCACCAATCCCAC +
Preference number: 2 (lower is better)
Translates to: RPVQISYTRHGPETTAFVFPIFF*EHHQSH
Trigger: GTGGGATTGGTGATGTTCTCAGAAGAAAATTGGAAA...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTTTACTAGCGGCTATGTaGACATTTGTCCGCAATAAA +
Preference number: 2 (lower is better)
Translates to: RPVQISYTRHGPETTAFVLLAAM*TFVRNK
Trigger: TTTATTGCGGACAAATGTGCACATAGCCGCTAGTAA...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp TCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTGTAACAACACTGCAATaGTATGATGCTGTGCGGTCA +
Preference number: 2 (lower is better)
Translates to: SWAPSSSNPAMTVLSFSGVTTLQ*YDAVRS
Trigger: TGACCGCACAGCATCATAGCATTGCAGTGTTGTTAC...ACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR CCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACAGTGCTGGTGTCACTaGGTTACCCCAACCATGTCC +
Preference number: 2 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVQCWCH*VTPTMS
Trigger: GGACATGGTTGGGGTAACCCAGTGACACCAGCACTG...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTCAGTCCAATCAGTGCTaGTGTCACTGGGTTACCCCA +
Preference number: 2 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSQSNQC*CHWVTP
Trigger: TGGGGTAACCCAGTGACACCAGCACTGATTGGACTG...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTGCAACGACAATCCTATaGGACCTAGCACTGAGGAAC +
Preference number: 2 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAATTIL*DLALRN
Trigger: GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTTTATGGATGCTCACCTaGCTCTCTGAAGCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSLWMLT*LSEAEG
Trigger: TCCCTCTGCTTCAGAGAGTCAGGTGAGCATCCATAA...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCACACGGCATGGTCCTaGAACCACAGCTTTTGTTTC +
Preference number: 2 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYHTAWS*NHSFCF
Trigger: GAAACAAAAGCTGTGGTTTCAGGACCATGCCGTGTG...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGGGGCAGTCCAATCAGTaGTGGTGTCACTGGGTTACC +
Preference number: 2 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWGQSNQ*WCHWVT
Trigger: GGTAACCCAGTGACACCAGCACTGATTGGACTGCCC...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTAGCTCCTGTTTTTGCTaGTTTCCAAGAGTCAACACA +
Preference number: 2 (lower is better)
Translates to: ATTILWDLALRNLTEDYISSCFC*FPRVNT
Trigger: TGTGTTGACTCTTGGAAAGCAGCAAAAACAGGAGCT...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACACATCGCTAGGGCTCTaGCTGTTAGGTTATGGATGC +
Preference number: 2 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYTSLGL*LLGYGC
Trigger: GCATCCATAACCTAACAGGCAGAGCCCTAGCGATGT...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACGCAACGACAATCCTATaGGACCTAGCACTGAGGAAC +
Preference number: 2 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYATTIL*DLALRN
Trigger: GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CAA 90 bp GAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAAATaGAGGGTTGAAGACTTGGTAGGGACTAGTGCAGCATGGGATAGT +
Preference number: 2 (lower is better)
Translates to: ETSEGNFLRHSWKIK*RVEDLVGTSAAWDS
Trigger: ACTATCCCATGCTGCACTAGTCCCTACCAAGTCTTCAACCCTCAATTTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CAA 90 bp CCCACGTCAAGGTCCTTAACCTTAATTGCATCTGCAAAATCTCTTTaGCCCTGTCAGGTAAATAATCACAATCTTCCCACGTCAAGGTCC +
Preference number: 2 (lower is better)
Translates to: PTSRSLTLIASAKSL*PCQVNNHNLPTSRS
Trigger: GGACCTTGACGTGGGAAGATTGTGATTATTTACCTGACAGGGCAAAAGAGATTTTGCAGATGCAATTAAGGTTAAGGACCTTGACGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR TCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTGGTAAAAATCGGATCTaGAATACTGACAGGGTTCCC +
Preference number: 2 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAGKNRI*NTDRVP
Trigger: GGGAACCCTGTCAGTATTTCAGATCCGATTTTTACC...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTATTATGGATGCTCACCTaGCTCTCTGAAGCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVLWMLT*LSEAEG
Trigger: TCCCTCTGCTTCAGAGAGTCAGGTGAGCATCCATAA...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTATTCAAAACCTTTGCATaGCTTGTGGGGAGCAGGGTC +
Preference number: 2 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVFKTFA*LVGSRV
Trigger: GACCCTGCTCCCCACAAGTCATGCAAAGGTTTTGAA...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACACACGGCATGGTCCTaGAACCACAGCTTTTGTTTC +
Preference number: 2 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVHTAWS*NHSFCF
Trigger: GAAACAAAAGCTGTGGTTTCAGGACCATGCCGTGTG...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCTGTTAGGTTATGGATaGTCACCTGACTCTCTGAAG +
Preference number: 2 (lower is better)
Translates to: QFVACDLPQPQKIRDHEALLGYG*SPDSLK
Trigger: CTTCAGAGAGTCAGGTGAGCATCCATAACCTAACAG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACGCTCTTCAAAACCTTTaGATGACTTGTGGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYALQNL*MTCGEQ
Trigger: CTGCTCCCCACAAGTCATGCAAAGGTTTTGAAGAGC...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTGGTTCTCACAGGGTGTaGATGGTTGACACAAGTTCA +
Preference number: 2 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSGSHRV*MVDTSS
Trigger: TGAACTTGTGTCAACCATGCACACCCTGTGAGAACC...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCATGTCCGGCCAAAATaGCACTACCCAGTGGTAGTG +
Preference number: 2 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWHVRPK*HYPVVV
Trigger: CACTACCACTGGGTAGTGCCATTTTGGCCGGACATG...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CAA 90 bp AACTTTTTGAGACACTCATGGAAGATCAAATTGAGGGTTGAAGACTaGGTAGGGACTAGTGCAGCATGGGATAGTGGTATTCACTGCAGA +
Preference number: 2 (lower is better)
Translates to: NFLRHSWKIKLRVED*VGTSAAWDSGIHCR
Trigger: TCTGCAGTGAATACCACTATCCCATGCTGCACTAGTCCCTACCAAGTCTTCAACCCTCAATTTGATCTTCCATGAGTGTCTCAAAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR GCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTTTCAGCTCCTGTTTTTaGTGCTTTCCAAGAGTCAAC +
Preference number: 2 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAFSSCF*CFPRVN
Trigger: GTTGACTCTTGGAAAGCAGCAAAAACAGGAGCTGAA...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAGGTTCTCACAGGGTGTaGATGGTTGACACAAGTTCA +
Preference number: 2 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVGSHRV*MVDTSS
Trigger: TGAACTTGTGTCAACCATGCACACCCTGTGAGAACC...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp TCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTTGGCCTGGCAACCAATaGTTATTTCATTGGATTATT +
Preference number: 2 (lower is better)
Translates to: SWAPSSSNPAMTVLSFSGWPGNQ*LFHWII
Trigger: AATAATCCAATGAAATAAGCATTGGTTGCCAGGCCA...ACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR GCA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTAGACACAGGAGCTATTTaGATGATGAACCATAGCCTG +
Preference number: 2 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILDTGAI*MMNHSL
Trigger: CAGGCTATGGTTCATCATGCAAATAGCTCCTGTGTC...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR CCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATCATGTCCGGCCAAAATaGCACTACCCAGTGGTAGTG +
Preference number: 2 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYHVRPK*HYPVVV
Trigger: CACTACCACTGGGTAGTGCCATTTTGGCCGGACATG...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCTTTGCATGACTTGTaGGGAGCAGGGTCACAATTT +
Preference number: 2 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVPLHDL*GAGSQF
Trigger: AAATTGTGACCCTGCTCCCCACAAGTCATGCAAAGG...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACAGCTTTTGTTTCTTTaGCCAGAATGCACCCCTCAC +
Preference number: 2 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVQLLFL*PECTPH
Trigger: GTGAGGGGTGCATTCTGGCCAAAGAAACAAAAGCTG...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CCA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTATACACTAAACCTAGGTaGCCACAAGCTTCATTTGGG +
Preference number: 2 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILYTKPR*PQASFG
Trigger: CCCAAATGAAGCTTGTGGCCACCTAGGTTTAGTGTA...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CAA 90 bp CCCACGTCAAGGTCCTTAACCTTAATTGCATCTGCAAAATCTCTTTaGCCCTGTCAGGTAAATAATCACAGGATACAGGGTTTAGGATGT +
Preference number: 2 (lower is better)
Translates to: PTSRSLTLIASAKSL*PCQVNNHRIQGLGC
Trigger: ACATCCTAAACCCTGTATCCTGTGATTATTTACCTGACAGGGCAAAAGAGATTTTGCAGATGCAATTAAGGTTAAGGACCTTGACGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR TCA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTAGCAATGAAATCATGTTaGCTGCATCAGTCTGTACCA +
Preference number: 2 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILAMKSC*LHQSVP
Trigger: TGGTACAGACTGATGCAGTCAACATGATTTCATTGC...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR TCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAGAAGCAGAGGGAGGCTaGCACAGATTAGCTTTTATT +
Preference number: 2 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVEAEGG*HRLAFI
Trigger: AATAAAAGCTAATCTGTGTCAGCCTCCCTCTGCTTC...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCCTTCTGAATTGTCAATaGGGTAATGTGTGCATCAGT +
Preference number: 2 (lower is better)
Translates to: VIASQSFKAETPFTNPTSLLNCQ*GNVCIS
Trigger: ACTGATGCACACATTACCTCATTGACAATTCAGAAG...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTACTGAGGAACCTCACTaGGGATTACATTTACATAGA +
Preference number: 2 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSTEEPH*GLHLHR
Trigger: TCTATGTAAATGTAATCCTCAGTGAGGTTCCTCAGT...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAGCAATGAAATCATGTTaGCTGCATCAGTCTGTACCA +
Preference number: 2 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVAMKSC*LHQSVP
Trigger: TGGTACAGACTGATGCAGTCAACATGATTTCATTGC...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACTTACTAGCGGCTATGTaGACATTTGTCCGCAATAAA +
Preference number: 2 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYLLAAM*TFVRNK
Trigger: TTTATTGCGGACAAATGTGCACATAGCCGCTAGTAA...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTTTGTGTTTACAAGTCTaGCTCTTTTGTGTGATAGCA +
Preference number: 2 (lower is better)
Translates to: QFVACDLPQPQKIRDHEALCLQV*LFCVIA
Trigger: TGCTATCACACAAAAGAGGCAGACTTGTAAACACAA...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATGCTCTTCAAAACCTTTaGATGACTTGTGGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYALQNL*MTCGEQ
Trigger: CTGCTCCCCACAAGTCATGCAAAGGTTTTGAAGAGC...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATCCTTTGCATGACTTGTaGGGAGCAGGGTCACAATTT +
Preference number: 2 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYPLHDL*GAGSQF
Trigger: AAATTGTGACCCTGCTCCCCACAAGTCATGCAAAGG...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCCGTTGGATTTACTTCTaGATTGTCAATGAGGTAATG +
Preference number: 2 (lower is better)
Translates to: VIASQSFKAETPFTNPTSRWIYF*IVNEVM
Trigger: CATTACCTCATTGACAATTCAGAAGTAAATCCAACG...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATGCAATGAAATCATGTTaGCTGCATCAGTCTGTACCA +
Preference number: 2 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYAMKSC*LHQSVP
Trigger: TGGTACAGACTGATGCAGTCAACATGATTTCATTGC...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAGCACAGTCTAAAGAGTaGGTATCAGAAGAATTTTAC +
Preference number: 2 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVAQSKE*VSEEFY
Trigger: GTAAAATTCTTCTGATACCCACTCTTTAGACTGTGC...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR TCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCCAATTTTCTTCTaGGAACATCACCAATCCCAC +
Preference number: 2 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYFPIFF*EHHQSH
Trigger: GTGGGATTGGTGATGTTCTCAGAAGAAAATTGGAAA...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR GCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATTTGTGTTTACAAGTCTaGCTCTTTTGTGTGATAGCA +
Preference number: 2 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYLCLQV*LFCVIA
Trigger: TGCTATCACACAAAAGAGGCAGACTTGTAAACACAA...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR TCA 72 bp ATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTaGTCCACATCGCTAGGGCTCTGCCTGTTAGGTTAT +
Preference number: 3 (lower is better)
Translates to: IMRLHRPRAQET*STSLGLCLLGY
Trigger: ATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR GCA 72 bp ACTGAGCTTCTGATTGGTGTAGGGCAGTCCAATCAGTaGTGGTGTCACTGGGTTACCCCAACCATGTCCGGC +
Preference number: 3 (lower is better)
Translates to: TELLIGVGQSNQ*WCHWVTPTMSG
Trigger: GCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTGATTGGACTGCCCTACACCAATCAGAAGCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR GCA 72 bp TCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGATaGTCACCTGACTCTCTGAAGCAGAGGGAGGCTGAC +
Preference number: 3 (lower is better)
Translates to: STSLGLCLLGYG*SPDSLKQREAD
Trigger: GTCAGCCTCCCTCTGCTTCAGAGAGTCAGGTGAGCATCCATAACCTAACAGGCAGAGCCCTAGCGATGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CCA 72 bp CACGGCATGGTCCTGAAACCACAGCTTTTGTTTCTTTaGCCAGAATGCACCCCTCACCTTGAGTGCCCGCCT +
Preference number: 3 (lower is better)
Translates to: HGMVLKPQLLFL*PECTPHLECPP
Trigger: AGGCGGGCACTCAAGGTGAGGGGTGCATTCTGGCCAAAGAAACAAAAGCTGTGGTTTCAGGACCATGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CCA 72 bp ATTGGTGTAGGGCAGTCCAATCAGTGCTGGTGTCACTaGGTTACCCCAACCATGTCCGGCCAAAATGGCACT +
Preference number: 3 (lower is better)
Translates to: IGVGQSNQCWCH*VTPTMSGQNGT
Trigger: AGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTGATTGGACTGCCCTACACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CCA 72 bp TCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGGTaGGAAAGGTTCTCCACTTCTGGGGACCCATGTGAT +
Preference number: 3 (lower is better)
Translates to: SFSGASSLAFYR*ERFSTSGDPCD
Trigger: ATCACATGGGTCCCCAGAAGTGGAGAACCTTTCCCACCTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR TCA 72 bp TTGGCTCATGGGCCCCTTCATCTTCAAATCCTGCAATaGCAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGG +
Preference number: 3 (lower is better)
Translates to: LAHGPLHLQILQ*QFCPSQVPALW
Trigger: CCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR CAA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTTGCAATGAAATCATGTaGACTGCATCAGTCTGTACC +
Preference number: 3 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIACNEIM*TASVCT
Trigger: GGTACAGACTGATGCAGTCAACATGATTTCATTGCA...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTGAGCAGGGTCACAATTaGTTGCATGTGACCTGCCTC +
Preference number: 3 (lower is better)
Translates to: RPVQISYTRHGPETTAFVEQGHN*LHVTCL
Trigger: GAGGCAGGTCACATGCAACAAATTGTGACCCTGCTC...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp AGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCCACATACACAGAGTTTaGCCTTTCAGGACATATGGC +
Preference number: 3 (lower is better)
Translates to: SWCRSWQGQHILEALWRFHIHRV*PFRTYG
Trigger: GCCATATGTCCTGAAAGGCAAAACTCTGTGTATGTG...GAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTGCCAACTCCTGCACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR CAA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTCAAAACAGTGGCCCATaGGGCACTGAGCTTCTGATT +
Preference number: 3 (lower is better)
Translates to: RPVQISYTRHGPETTAFVQNSGP*GTELLI
Trigger: AATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTG...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR TCA 72 bp CATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTaGGCTTCTGATTGGTGTAGGGCAGTCCAATCAGTG +
Preference number: 3 (lower is better)
Translates to: HDSESKQWPIGH*ASDWCRAVQSV
Trigger: CACTGATTGGACTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR GCA 72 bp ATTCCTTGGCTCATGGGCCCCTTCATCTTCAAATCCTaGAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTC +
Preference number: 3 (lower is better)
Translates to: IPWLMGPFIFKS*NDSSVLLRCQL
Trigger: GAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGAGCCAAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR CAA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTAAGAGTCAACACACGTaGGATTTACTTCTGAATTGT +
Preference number: 3 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAKSQHT*DLLLNC
Trigger: ACAATTCAGAAGTAAATCCAACGTGTGTTGACTCTT...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCCGGGCTCAGGAAACTaGATCCACATCGCTAGGGCT +
Preference number: 3 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAPGSGN*IHIARA
Trigger: AGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR TCA 72 bp GCTTTTGTTTCTTTGGCCAGAATGCACCCCTCACCTTaGGTGCCCGCCTTAGAAACACAGGTACTTGGTTCT +
Preference number: 3 (lower is better)
Translates to: AFVSLARMHPSP*VPALETQVLGS
Trigger: AGAACCAAGTACCTGTGTTTCTAAGGCGGGCACTCAAGGTGAGGGGTGCATTCTGGCCAAAGAAACAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR TCA 72 bp ACGTCCCGTACAGATCAGCTACACACGGCATGGTCCTaGAACCACAGCTTTTGTTTCTTTGGCCAGAATGCA +
Preference number: 3 (lower is better)
Translates to: TSRTDQLHTAWS*NHSFCFFGQNA
Trigger: TGCATTCTGGCCAAAGAAACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CCA 72 bp TTGAGGGTTGAAGACTTGGTAGGGACTAGTGCAGCATaGGATAGTGGTATTCACTGCAGAGAAGTGTCTGCC +
Preference number: 3 (lower is better)
Translates to: LRVEDLVGTSAA*DSGIHCREVSA
Trigger: GGCAGACACTTCTCTGCAGTGAATACCACTATCCCATGCTGCACTAGTCCCTACCAAGTCTTCAACCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR CAA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTACAAGTCTGCCTCTTTaGTGTGATAGCAAGTCAGTC +
Preference number: 3 (lower is better)
Translates to: RPVQISYTRHGPETTAFVTSLPL*CDSKSV
Trigger: GACTGACTTGCTATCACACAAAAGAGGCAGACTTGT...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR TCA 72 bp AACACAGGTACTTGGTTCTCACAGGGTGTGCATGGTTaGCACAAGTTCATCTGCCCCACGGTAAAAGCTCTT +
Preference number: 3 (lower is better)
Translates to: NTGTWFSQGVHG*HKFICPTVKAL
Trigger: AAGAGCTTTTACCGTGGGGCAGATGAACTTGTGTCAACCATGCACACCCTGTGAGAACCAAGTACCTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR GCA 72 bp TTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTaGCAGCTCTCTGGCTTTCTACAGGTGGGAAAGGTT +
Preference number: 3 (lower is better)
Translates to: FKSCNDSSVLLR*QLSGFLQVGKV
Trigger: AACCTTTCCCACCTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CCA 72 bp GTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATaGCACTACCCAGTGGTAGTGAACCATCTAATTAAA +
Preference number: 3 (lower is better)
Translates to: VSLGYPNHVRPK*HYPVVVNHLIK
Trigger: TTTAATTAGATGGTTCACTACCACTGGGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGCACTTTACAGTACATTaGACTATAGTGCACAACATG +
Preference number: 3 (lower is better)
Translates to: PGSGNLIHIARALPVRLWHFTVH*TIVHNM
Trigger: CATGTTGTGCACTATAGTCAAATGTACTGTAAAGTG...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTACAGGGACAGCACATCTaGGAGGCACTATGGAGGTTC +
Preference number: 3 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILQGQHI*EALWRF
Trigger: GAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTG...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR CAA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCAAAACAGTGGCCCATaGGGCACTGAGCTTCTGATT +
Preference number: 3 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAQNSGP*GTELLI
Trigger: AATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTGAGCAGGGTCACAATTaGTTGCATGTGACCTGCCTC +
Preference number: 3 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSEQGHN*LHVTCL
Trigger: GAGGCAGGTCACATGCAACAAATTGTGACCCTGCTC...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACACAGGGTGTGCATGGTaGACACAAGTTCATCTGCCC +
Preference number: 3 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYTGCAW*TQVHLP
Trigger: GGGCAGATGAACTTGTGTCAACCATGCACACCCTGT...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR TCA 72 bp GGGTTTAGGATGTGGCCCTACCACAGAAAGAGTCTTTaGGTCCTTGACATTGAGGAGGAAACCAATCCTGTT +
Preference number: 3 (lower is better)
Translates to: GFRMWPYHRKSL*VLDIEEETNPV
Trigger: AACAGGATTGGTTTCCTCCTCAATGTCAAGGACTCAAAGACTCTTTCTGTGGTAGGGCCACATCCTAAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CCA 72 bp AGAGAAACCTCATTAACAAGGGCAACGACAATCCTATaGGACCTAGCACTGAGGAACCTCACTGAGGATTAC +
Preference number: 3 (lower is better)
Translates to: RETSLTRATTIL*DLALRNLTEDY
Trigger: GTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CCA 72 bp CACGGTAAAAGCTCTTCAAAACCTTTGCATGACTTGTaGGGAGCAGGGTCACAATTTGTTGCATGTGACCTG +
Preference number: 3 (lower is better)
Translates to: HGKSSSKPLHDL*GAGSQFVACDL
Trigger: CAGGTCACATGCAACAAATTGTGACCCTGCTCCCCACAAGTCATGCAAAGGTTTTGAAGAGCTTTTACCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CCA 72 bp TTTAGCCTCTATAGGTCACTGGCATTCCTTGGCTCATaGGCCCCTTCATCTTCAAATCCTGCAATGACAGTT +
Preference number: 3 (lower is better)
Translates to: FSLYRSLAFLGS*APSSSNPAMTV
Trigger: AACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGAGCCAAGGAATGCCAGTGACCTATAGAGGCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR CAA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTATGGCAGAGCCACATTaGCTAACAGTATTTTCTAAT +
Preference number: 3 (lower is better)
Translates to: RPVQISYTRHGPETTAFVMAEPH*LTVFSN
Trigger: ATTAGAAAATACTGTTAGCAAATGTGGCTCTGCCAT...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATCCGGGCTCAGGAAACTaGATCCACATCGCTAGGGCT +
Preference number: 3 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYPGSGN*IHIARA
Trigger: AGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACAAACCTTTGCATGACTaGTGGGGAGCAGGGTCACAA +
Preference number: 3 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYKPLHD*WGAGSQ
Trigger: TTGTGACCCTGCTCCCCACAAGTCATGCAAAGGTTT...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTACTCTCTCCTGCTCTCTaGGCCTCTAGATGTATCACA +
Preference number: 3 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILLSPAL*ASRCIT
Trigger: TGTGATACATCTAGAGGCCAAGAGAGCAGGAGAGAG...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR TCA 72 bp AGTACAATCAGTTATAATTACAACACTGCAGCAATCTaGGCTGCCACCTGCTGGGATCGGTCTAAGGGAAAC +
Preference number: 3 (lower is better)
Translates to: STISYNYNTAAI*AATCWDRSKGN
Trigger: GTTTCCCTTAGACCGATCCCAGCAGGTGGCAGCTCAGATTGCTGCAGTGTTGTAATTATAACTGATTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR TCA 72 bp GCACAATTGCCCTGTATAAAGATGACCAAGGGAGGGTaGAATCCCCTTTTGGGAGATTGTGGTGTTTGGAAA +
Preference number: 3 (lower is better)
Translates to: AQLPCIKMTKGG*NPLLGDCGVWK
Trigger: TTTCCAAACACCACAATCTCCCAAAAGGGGATTTCACCCTCCCTTGGTCATCTTTATACAGGGCAATTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR CAA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAAAACCTTTGCATGACTaGTGGGGAGCAGGGTCACAA +
Preference number: 3 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVKPLHD*WGAGSQ
Trigger: TTGTGACCCTGCTCCCCACAAGTCATGCAAAGGTTT...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTACAGCTTTTGTTTCTTaGGCCAGAATGCACCCCTCA +
Preference number: 3 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSTAFVS*ARMHPS
Trigger: TGAGGGGTGCATTCTGGCCAAAGAAACAAAAGCTGT...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR GCA 72 bp AAGGCTGCTTCACACACTGTTCTTATCTATCATGATTaGTCTTCCTTACATACACGTCCCGTACAGATCAGC +
Preference number: 3 (lower is better)
Translates to: KAASHTVLIYHD*SSLHTRPVQIS
Trigger: GCTGATCTGTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGAAGCAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR GCA 72 bp TTGAAGCCAAAAAGCATTTCTGACACAGGAGCTATTTaGATGATGAACCATAGCCTGCAGGAGAACAAAGCC +
Preference number: 3 (lower is better)
Translates to: LKPKSISDTGAI*MMNHSLQENKA
Trigger: GGCTTTGTTCTCCTGCAGGCTATGGTTCATCATGCAAATAGCTCCTGTGTCAGAAATGCTTTTTGGCTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR CAA 90 bp TCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTCACTTTACAGTACATTaGACTATAGTGCACAACATG +
Preference number: 3 (lower is better)
Translates to: SWAPSSSNPAMTVLSFSGHFTVH*TIVHNM
Trigger: CATGTTGTGCACTATAGTCAAATGTACTGTAAAGTG...ACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR CAA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCGGCTATGTGCACATTaGTCCGCAATAAAAGAAGTT +
Preference number: 3 (lower is better)
Translates to: QFVACDLPQPQKIRDHEARLCAH*SAIKEV
Trigger: AACTTCTTTTATTGCGGACAAATGTGCACATAGCCG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACAAGAGTCAACACACGTaGGATTTACTTCTGAATTGT +
Preference number: 3 (lower is better)
Translates to: ETSLTRATTILWDLALRNKSQHT*DLLLNC
Trigger: ACAATTCAGAAGTAAATCCAACGTGTGTTGACTCTT...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTTGCAATGAAATCATGTaGACTGCATCAGTCTGTACC +
Preference number: 3 (lower is better)
Translates to: QFVACDLPQPQKIRDHEACNEIM*TASVCT
Trigger: GGTACAGACTGATGCAGTCAACATGATTTCATTGCA...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACACAAGTCTGCCTCTTTaGTGTGATAGCAAGTCAGTC +
Preference number: 3 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYTSLPL*CDSKSV
Trigger: GACTGACTTGCTATCACACAAAAGAGGCAGACTTGT...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR TCA 72 bp TGTGAAGGCTGCTTCACACACTGTTCTTATCTATCATaGTTGCTCTTCCTTACATACACGTCCCGTACAGAT +
Preference number: 3 (lower is better)
Translates to: CEGCFTHCSYLS*LLFLTYTSRTD
Trigger: ATCTGTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGAAGCAGCCTTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR TCA 72 bp ATAATGCAAAATGACTTAAAAGTCACAGGATTGCACTaGGCACTTGATAAGCCCACTGCCCAGTGGGTAACT +
Preference number: 3 (lower is better)
Translates to: IMQNDLKVTGLH*ALDKPTAQWVT
Trigger: AGTTACCCACTGGGCAGTGGGCTTATCAAGTGCTCAGTGCAATCCTGTGACTTTTAAGTCATTTTGCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR GCA 72 bp CACAGGTCACTTCCAGATTTAGTAACAACACTGCAATaGTATGATGCTGTGCGGTCATTTAGCTTAAACCAC +
Preference number: 3 (lower is better)
Translates to: HRSLPDLVTTLQ*YDAVRSFSLNH
Trigger: GTGGTTTAAGCTAAATGACCGCACAGCATCATAGCATTGCAGTGTTGTTACTAAATCTGGAAGTGACCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCGGCTATGTGCACATTaGTCCGCAATAAAAGAAGTT +
Preference number: 3 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYRLCAH*SAIKEV
Trigger: AACTTCTTTTATTGCGGACAAATGTGCACATAGCCG...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTACGGCTATGTGCACATTaGTCCGCAATAAAAGAAGTT +
Preference number: 3 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILRLCAH*SAIKEV
Trigger: AACTTCTTTTATTGCGGACAAATGTGCACATAGCCG...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR TCA 72 bp GACAATCCTATGGGACCTAGCACTGAGGAACCTCACTaGGGATTACATTTACATAGATTGCTATACTTCTCA +
Preference number: 3 (lower is better)
Translates to: DNPMGPSTEEPH*GLHLHRLLYFS
Trigger: TGAGAAGTATAGCAATCTATGTAAATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR TCA 72 bp ACATCTTGGAGGCACTATGGAGGTTCAGGGGAGCTTTaGATGAAACCACTGAACTTTAAGATAAGATTGTCT +
Preference number: 3 (lower is better)
Translates to: TSWRHYGGSGEL*MKPLNFKIRLS
Trigger: AGACAATCTTATCTTAAAGTTCAGTGGTTTCATTCAAAGCTCCCCTGAACCTCCATAGTGCCTCCAAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR-3UTR CAA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTATGGCAGAGCCACATTaGCTAACAGTATTTTCTAAT +
Preference number: 3 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAMAEPH*LTVFSN
Trigger: ATTAGAAAATACTGTTAGCAAATGTGGCTCTGCCAT...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATAGCTCTTCAAAACCTTaGCATGACTTGTGGGGAGCA +
Preference number: 3 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYSSSKP*HDLWGA
Trigger: TGCTCCCCACAAGTCATGCAAAGGTTTTGAAGAGCT...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCCACTTTACAGTACATTaGACTATAGTGCACAACATG +
Preference number: 3 (lower is better)
Translates to: VIASQSFKAETPFTNPTSHFTVH*TIVHNM
Trigger: CATGTTGTGCACTATAGTCAAATGTACTGTAAAGTG...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTAGTTTGTGCAGTATTCTaGTTTCTGAAAGTCAAGTTG +
Preference number: 3 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILVCAVF*FLKVKL
Trigger: CAACTTGACTTTCAGAAACAAGAATACTGCACAAAC...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR TCA 72 bp ATTCATGGCCTTTGCACAGCTTTTATTATTAAGCTATaGGCATCCTGTTTGAGGCTAGTTTTACTAGCGGCT +
Preference number: 3 (lower is better)
Translates to: IHGLCTAFIIKL*ASCLRLVLLAA
Trigger: AGCCGCTAGTAAAACTAGCCTCAAACAGGATGCTCATAGCTTAATAATAAAAGCTGTGCAAAGGCCATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR TCA 72 bp GGATTCCAGGAGACTTTTAAGACATGGAATTCTCGGTaGTTATATTCAAATGGCAGAGCCACATTTGCTAAC +
Preference number: 3 (lower is better)
Translates to: GFQETFKTWNSR*LYSNGRATFAN
Trigger: GTTAGCAAATGTGGCTCTGCCATTTGAATATAATCACCGAGAATTCCATGTCTTAAAAGTCTCCTGGAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR GCA 72 bp GCATCCTGTTTGAGGCTAGTTTTACTAGCGGCTATGTaGACATTTGTCCGCAATAAAAGAAGTTTACTCATT +
Preference number: 3 (lower is better)
Translates to: ASCLRLVLLAAM*TFVRNKRSLLI
Trigger: AATGAGTAAACTTCTTTTATTGCGGACAAATGTGCACATAGCCGCTAGTAAAACTAGCCTCAAACAGGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR-3UTR CAA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAATGGCAGAGCCACATTaGCTAACAGTATTTTCTAAT +
Preference number: 3 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVMAEPH*LTVFSN
Trigger: ATTAGAAAATACTGTTAGCAAATGTGGCTCTGCCAT...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR GCA 72 bp CTGTGGTCTGCACATCCTCTCCAGATACTCAAGAAATaGAATTCAACTATTTGGAGATTACTTTTTGATAGC +
Preference number: 3 (lower is better)
Translates to: LWSAHPLQILKK*NSTIWRLLFDS
Trigger: GCTATCAAAAAGTAATCTCCAAATAGTTGAATTGCATTTCTTGAGTATCTGGAGAGGATGTGCAGACCACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR GCA 72 bp AATAGTAACACATGCTCCAATGCATGCTTGAGTTTGTaGAGTATTCTTGTTTCTGAAAGTCAAGTTGTGACA +
Preference number: 3 (lower is better)
Translates to: NSNTCSNACLSL*SILVSESQVVT
Trigger: TGTCACAACTTGACTTTCAGAAACAAGAATACTGCACAAACTCAAGCATGCATTGGAGCATGTGTTACTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CCA 72 bp GCAACCAATGCTTATTTCATTGGATTATTTTCTGACTaGGACATGAGTTCATCGCATCTTCCCAGAATTTTA +
Preference number: 3 (lower is better)
Translates to: ATNAYFIGLFSD*DMSSSHLPRIL
Trigger: TAAAATTCTGGGAAGATGCGATGAACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CCA 72 bp TCTAGATGTATCACAATACAATTCCTAACTGTGGCCTaGCAACCAATGCTTATTTCATTGGATTATTTTCTG +
Preference number: 3 (lower is better)
Translates to: SRCITIQFLTVA*QPMLISLDYFL
Trigger: CAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGTGATACATCTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTGGGGAGGGTGGAGGGTaGCGGCGGCTCGCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAGEGGG*RRLASS
Trigger: TGAGCTAGCGAGCCGCCGCCACCCTCCACCCTCCCC...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGCGCTCCTCTCCGCCCTaGCGGGGGAGGGTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWRSSPP*RGRVEG
Trigger: ACCCTCCACCCTCCCCCGGCAGGGCGGAGAGGAGCG...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTGCCGGGCACCATCGCTaGCTCCGGCCGCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RPVQISYTRHGPETTAFVAGHHR*LRPLLS
Trigger: GGAGAGGAGCGGCCGGAGTCAGCGATGGTGCCCGGC...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGATCCTCTCCGCCGCCTaGGCTCCAGCAATAGCGGAG +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWILSAA*APAIAE
Trigger: CTCCGCTATTGCTGGAGCGCAGGCGGCGGAGAGGAT...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339865.9
ENST00000527733.7
CDS-3UTR GCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTACGCTCCTCTCCGCCCTaGCGGGGGAGGGTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVRSSPP*RGRVEG
Trigger: ACCCTCCACCCTCCCCCGGCAGGGCGGAGAGGAGCG...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp AGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCAGGGCTGCATTCCTCTaGAGGCTCTGGGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: SWCRSWQGQHILEALWRFRAAFL*RLWGES
Trigger: GGACTCTCCCCAGAGCCTCCAGAGGAATGCAGCCCT...GAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTGCCAACTCCTGCACCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCCGGGCTCAGGAAACTTaGTCCACATCGCTAGGGCTC +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTRAQET*STSLGL
Trigger: GAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCG...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCAAAGATAAGAGATCATaGGGCTCCACCGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTKDKRS*GSTAPG
Trigger: CCCGGGGGCGGTGGAGCCTCATGATCTCTTATCTTT...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCCTTGGTGCCCACCTGTaGGGCAAGGTTTTAGGGTCC +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTLGAHL*GKVLGS
Trigger: GGACCCTAAAACCTTGCCTCACAGGTGGGCACCAAG...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp AGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCCACCAGTCAAGCTGGTaGAGGAGTTGGCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: SWCRSWQGQHILEALWRFHQSSW*RSWQGQ
Trigger: CTGTCCCTGCCAACTCCTGCACCAGCTTGACTGGTG...GAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTGCCAACTCCTGCACCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGCGGAGGCCTCAGCCTaGGCCTCAGACACCAGCGCG +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVAEASA*ASDTSA
Trigger: CGCGCTGGTGTCTGAGGCCCAGGCTGAGGCCTCCGC...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339865.9
ENST00000527733.7
CDS-3UTR CCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTGGGGAGGGTGGAGGGTaGCGGCGGCTCGCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIGEGGG*RRLASS
Trigger: TGAGCTAGCGAGCCGCCGCCACCCTCCACCCTCCCC...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CAA 72 bp GATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTaGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTA +
Preference number: 4 (lower is better)
Translates to: DHEAPPPPGSGN*IHIARALPVRL
Trigger: TAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGGCTCACCTGACTCTCTaGAGCAGAGGGAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWAHLTL*SRGRLT
Trigger: TGTCAGCCTCCCTCTGCTTCAGAGAGTCAGGTGAGC...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGAAAGATAAGAGATCATaGGGCTCCACCGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWKDKRS*GSTAPG
Trigger: CCCGGGGGCGGTGGAGCCTCATGATCTCTTATCTTT...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCGGGCAGTCCAATCAGTaGTGGTGTCACTGGGTTACC +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTGQSNQ*WCHWVT
Trigger: GGTAACCCAGTGACACCAGCACTGATTGGACTGCCC...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGATCCTCTCCGCCGCCTaGGCTCCAGCAATAGCGGAG +
Preference number: 4 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQILSAA*APAIAE
Trigger: CTCCGCTATTGCTGGAGCGCAGGCGGCGGAGAGGAT...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTCATGTCCGGCCAAAATaGCACTACCCAGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAHVRPK*HYPVVV
Trigger: CACTACCACTGGGTAGTGCCATTTTGGCCGGACATG...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTCAGTCCAATCAGTGCTaGTGTCACTGGGTTACCCCA +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAQSNQC*CHWVTP
Trigger: TGGGGTAACCCAGTGACACCAGCACTGATTGGACTG...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTGCCTGGCGTCGGAGGTaGCCGGCACTTGTCGCTAGC +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIAWRRR*PALVAS
Trigger: GCTAGCGACAAGTGCCGGCCACCTCCGACGCCAGGC...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTTTATGGATGCTCACCTaGCTCTCTGAAGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIALWMLT*LSEAEG
Trigger: TCCCTCTGCTTCAGAGAGTCAGGTGAGCATCCATAA...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTTTCAAAACCTTTGCATaGCTTGTGGGGAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAFKTFA*LVGSRV
Trigger: GACCCTGCTCCCCACAAGTCATGCAAAGGTTTTGAA...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTCCAAACACTCTAGTGTaGAGGCTGCTTCACACACTG +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAPNTLV*RLLHTL
Trigger: CAGTGTGTGAAGCAGCCTTCACACTAGAGTGTTTGG...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTGCCGGGCACCATCGCTaGCTCCGGCCGCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSAGHHR*LRPLLS
Trigger: GGAGAGGAGCGGCCGGAGTCAGCGATGGTGCCCGGC...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCGCCGGGCACCATCGCTaGCTCCGGCCGCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSAGHHR*LRPLLS
Trigger: GGAGAGGAGCGGCCGGAGTCAGCGATGGTGCCCGGC...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTGTCACAGGATTGCACTaGGCACTTGATAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAVTGLH*ALDKPT
Trigger: AGTGGGCTTATCAAGTGCTCAGTGCAATCCTGTGAC...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTTCGGACTCTCTGCCCTaGAGGGAAAGACTCGAGCCG +
Preference number: 4 (lower is better)
Translates to: RPVQISYTRHGPETTAFVSDSLP*RERLEP
Trigger: CGGCTCGAGTCTTTCCCTGCAGGGCAGAGAGTCCGA...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS-3UTR GCA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTACGCTCCTCTCCGCCCTaGCGGGGGAGGGTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILRSSPP*RGRVEG
Trigger: ACCCTCCACCCTCCCCCGGCAGGGCGGAGAGGAGCG...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGCAGTGCTGGTGTCACTaGGTTACCCCAACCATGTCC +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWQCWCH*VTPTMS
Trigger: GGACATGGTTGGGGTAACCCAGTGACACCAGCACTG...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTGGGGAGGGTGGAGGGTaGCGGCGGCTCGCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAGEGGG*RRLASS
Trigger: TGAGCTAGCGAGCCGCCGCCACCCTCCACCCTCCCC...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTTCTTTCGGGACCAGTTaGTTCTCCTCGCCGGGCACC +
Preference number: 4 (lower is better)
Translates to: RPVQISYTRHGPETTAFVSFGTS*FSSPGT
Trigger: GGTGCCCGGCGAGGAGAACCAACTGGTCCCGAAAGA...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCTTATGGATGCTCACCTaGCTCTCTGAAGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTLWMLT*LSEAEG
Trigger: TCCCTCTGCTTCAGAGAGTCAGGTGAGCATCCATAA...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTTTTCTGACTGGGACATaGGTTCATCGCATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAFLTGT*VHRIFP
Trigger: TGGGAAGATGCGATGAACTCATGTCCCAGTCAGAAA...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTCCTATAAACCTGTCATaGACACTGTCTTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAPINLS*TLSSPA
Trigger: TGCTGGGGAAGACAGTGTTCATGACAGGTTTATAGG...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTACGCTCTCAAACTCTTaGTTGCTGGCATACACTCGA +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIATLSNS*LLAYTR
Trigger: TCGAGTGTATGCCAGCAATCAAGAGTTTGAGAGCGT...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGTTTGCCCTCCTAGCTTaGCCTACTGATGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWFALLA*PTDGCT
Trigger: AGTGCAGCCATCAGTAGGTCAAGCTAGGAGGGCAAA...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTCCATCCTGCTGTTGCTaGAGTGACAAGCTTTTGAGT +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAPSCCC*SDKLLS
Trigger: ACTCAAAAGCTTGTCACTGCAGCAACAGCAGGATGG...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGCTGCAGAGAAGTGTCTaGCAGCAGGAGGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQLQRSV*QQEAGK
Trigger: CTTGCCAGCCTCCTGCTGGCAGACACTTCTCTGCAG...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CAA 72 bp TCAAGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTaGGAGGCACTATGGAGGTTCAGGGGAGCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: SSWCRSWQGQHI*EALWRFRGALN
Trigger: ATTCAAAGCTCCCCTGAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTGCCAACTCCTGCACCAGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTACAATTTGTTGCATGTaGCCTGCCTCAGCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIATICCM*PASASK
Trigger: TTTTGAGGCTGAGGCAGGTCACATGCAACAAATTGT...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGCACACGGCATGGTCCTaGAACCACAGCTTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWHTAWS*NHSFCF
Trigger: GAAACAAAAGCTGTGGTTTCAGGACCATGCCGTGTG...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTATTAGCGTCGAGAAGTaGCTTGTCACTGGTATGATC +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAISVEK*LVTGMI
Trigger: GATCATACCAGTGACAAGTCACTTCTCGACGCTAAT...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp AGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCACGCTCTCAAACTCTTaGTTGCTGGCATACACTCGA +
Preference number: 4 (lower is better)
Translates to: SWCRSWQGQHILEALWRFTLSNS*LLAYTR
Trigger: TCGAGTGTATGCCAGCAATCAAGAGTTTGAGAGCGT...GAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTGCCAACTCCTGCACCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTAACCACATTGCTCCCTaGGCTGAGGAATTAATTCCT +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIANHIAP*AEELIP
Trigger: AGGAATTAATTCCTCAGCTCAGGGAGCAATGTGGTT...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCCAATTTCTGACCTGGTaGGCTGACACTCAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTQFLTW*ADTQLR
Trigger: TCTCAACTGAGTGTCAGCTCACCAGGTCAGAAATTG...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCGCTCTTCAAAACCTTTaGATGACTTGTGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTALQNL*MTCGEQ
Trigger: CTGCTCCCCACAAGTCATGCAAAGGTTTTGAAGAGC...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTGTAACAACACTGCAATaGTATGATGCTGTGCGGTCA +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAVTTLQ*YDAVRS
Trigger: TGACCGCACAGCATCATAGCATTGCAGTGTTGTTAC...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCTCTCGGGACTCCCTCTaGCGGCCGGGGAAGGACCAG +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSSRDSL*RPGKDQ
Trigger: CTGGTCCTTCCCCGGCCGGCAGAGGGAGTCCCGAGA...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS-3UTR GCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTAGTTCTTGTACATCATaGTGCTGCCAAGCCTCACTA +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIASSCTS*CCQASL
Trigger: TAGTGAGGCTTGGCAGCAGCATGATGTACAAGAACT...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp AGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCCCTTTGCATGACTTGTaGGGAGCAGGGTCACAATTT +
Preference number: 4 (lower is better)
Translates to: SWCRSWQGQHILEALWRFPLHDL*GAGSQF
Trigger: AAATTGTGACCCTGCTCCCCACAAGTCATGCAAAGG...GAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTGCCAACTCCTGCACCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTTACACTAAACCTAGGTaGCCACAAGCTTCATTTGGG +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAYTKPR*PQASFG
Trigger: CCCAAATGAAGCTTGTGGCCACCTAGGTTTAGTGTA...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGATCTTGGAGGCACTATaGAGGTTCAGGGGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWILEAL*RFRGAL
Trigger: CAAAGCTCCCCTGAACCTCCATAGTGCCTCCAAGAT...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CAA 72 bp GTGCACAACATGATTCCGAGTCAAAACAGTGGCCCATaGGGCACTGAGCTTCTGATTGGTGTAGGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: VHNMIPSQNSGP*GTELLIGVGQS
Trigger: GGACTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCATGTTGTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACCGGGCTCAGGAAACTTaGTCCACATCGCTAGGGCTC +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNRAQET*STSLGL
Trigger: GAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCG...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCACAATTTGTTGCATGTaGCCTGCCTCAGCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTTICCM*PASASK
Trigger: TTTTGAGGCTGAGGCAGGTCACATGCAACAAATTGT...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCATTAGCGTCGAGAAGTaGCTTGTCACTGGTATGATC +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTISVEK*LVTGMI
Trigger: GATCATACCAGTGACAAGTCACTTCTCGACGCTAAT...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTGTGCAACTTTCAGTCTaGGGAGATTTCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAVQLSV*GDFSSS
Trigger: TGAAGATGAGAAATCTCCTCAGACTGAAAGTTGCAC...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTATATCCTCTGCTTCCTaGAGATCCACCATGTGTTTT +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAISSAS*RSTMCF
Trigger: AAAACACATGGTGGATCTTCAGGAAGCAGAGGATAT...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTCCTCTCATTGAGAGGTaGTTCGATGTTTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAPLIER*FDVFKV
Trigger: GACTTTGAAAACATCGAATCACCTCTCAATGAGAGG...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGATTCTTCCCCTCCCTaGCACTCCGTTGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVDSSPP*HSVEGG
Trigger: TCCTCCCTCAACGGAGTGTCAGGGAGGGGAAGAATC...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTGCCAAAAAGCATTTCTaGCACAGGAGCTATTTGCAT +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAAKKHF*HRSYLH
Trigger: ATGCAAATAGCTCCTGTGTCAGAAATGCTTTTTGGC...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp TCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTGGGGCAGCCATCTGGTaGTCATGTGATCAACAGGGC +
Preference number: 4 (lower is better)
Translates to: SWAPSSSNPAMTVLSFSGGAAIW*SCDQQG
Trigger: GCCCTGTTGATCACATGATCACCAGATGGCTGCCCC...ACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGGGTTCTCACAGGGTGTaGATGGTTGACACAAGTTCA +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWGSHRV*MVDTSS
Trigger: TGAACTTGTGTCAACCATGCACACCCTGTGAGAACC...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCTCTTGTACATCATGCTaGTGCCAAGCCTCACTACTA +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTSCTSC*CQASLL
Trigger: TAGTAGTGAGGCTTGGCAGCAGCATGATGTACAAGA...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTTTGTCTCAGTACTTTTaGTGCTGTCCCCATTATCTC +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIALSQYF*CCPHYL
Trigger: GAGATAATGGGGACAGCAGCAAAAGTACTGAGACAA...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTTGTGATCAACAGGGCTaGATTCCTCTGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RPVQISYTRHGPETTAFVCDQQG*IPLEAL
Trigger: CAGAGCCTCCAGAGGAATGCAGCCCTGTTGATCACA...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCAGAAACACAGGTACTTaGTTCTCACAGGGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTRNTGT*FSQGVH
Trigger: ATGCACACCCTGTGAGAACCAAGTACCTGTGTTTCT...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGGAAGTGACTTGTCACTaGTATGATCCAGTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWEVTCH*YDPVVP
Trigger: AGGCACCACTGGATCATACCAGTGACAAGTCACTTC...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS-3UTR CCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGCCCAGAACCTTCTCTTaGAAGCGGACCTATAAACCT +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWPRTFS*KRTYKP
Trigger: AGGTTTATAGGTCCGCTTCCAAGAGAAGGTTCTGGG...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTCAAACTCTTGATTGCTaGCATACACTCGAAAGACCT +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAQTLDC*HTLERP
Trigger: AGGTCTTTCGAGTGTATGCCAGCAATCAAGAGTTTG...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTACTGGTATGATCCAGTaGTGCCATATCAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIATGMIQ*CHISSI
Trigger: AATACTGCTGATATGGCACCACTGGATCATACCAGT...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTTGGCCCATTGGGCACTaGGCTTCTGATTGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIWPIGH*ASDWCR
Trigger: CCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCA...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGGGTAAAAATCGGATCTaGAATACTGACAGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWGKNRI*NTDRVP
Trigger: GGGAACCCTGTCAGTATTTCAGATCCGATTTTTACC...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTTTCAAAACCTTTGCATaGCTTGTGGGGAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: RPVQISYTRHGPETTAFVFKTFA*LVGSRV
Trigger: GACCCTGCTCCCCACAAGTCATGCAAAGGTTTTGAA...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACCAGGGTGTGCATGGTTaGCACAAGTTCATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNQGVHG*HKFICP
Trigger: GGGGCAGATGAACTTGTGTCAACCATGCACACCCTG...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCAGGGTGTGCATGGTTaGCACAAGTTCATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIQGVHG*HKFICP
Trigger: GGGGCAGATGAACTTGTGTCAACCATGCACACCCTG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCTCCTCCAGCAGTATTTaGGGTTGTTCACCATCTTTA +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTSSSSI*GCSPSL
Trigger: TAAAGATGGTGAACAACCTCAAATACTGCTGGAGGA...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCATATCCTCTGCTTCCTaGAGATCCACCATGTGTTTT +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTISSAS*RSTMCF
Trigger: AAAACACATGGTGGATCTTCAGGAAGCAGAGGATAT...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTTCTGGATCAGAAGTCTaGATATGCTGTTCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIASGSEV*ICCSSS
Trigger: AGAACTTGAACAGCATATTCAGACTTCTGATCCAGA...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTAATATCACTGTCCACTaGACTTGTACTCCTGTCATT +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIANITVH*TCTPVI
Trigger: AATGACAGGAGTACAAGTTCAGTGGACAGTGATATT...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCCATTGCTCCCTGAGCTaGGGAATTAATTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTHCSLS*GINSSF
Trigger: AAAAGAGGAATTAATTCCTCAGCTCAGGGAGCAATG...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGATGACCAAGGGAGGGTaGAATCCCCTTTTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQMTKGG*NPLLGD
Trigger: ATCTCCCAAAAGGGGATTTCACCCTCCCTTGGTCAT...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGCTTCAAATCCTGCAATaGCAGTTCTGTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWLQILQ*QFCPSQ
Trigger: CTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAG...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGAGTTCTTGTACATCATaGTGCTGCCAAGCCTCACTA +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWSSCTS*CCQASL
Trigger: TAGTGAGGCTTGGCAGCAGCATGATGTACAAGAACT...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTCCGAAGGCCCTTCCGTaGATCACACTTCTTCTTACA +
Preference number: 4 (lower is better)
Translates to: RPVQISYTRHGPETTAFVPKALP*ITLLLT
Trigger: TGTAAGAAGAAGTGTGATGCACGGAAGGGCCTTCGG...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCCTGATTGTATTTGCATaGCGATCCAGGAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTLIVFA*RSRSFH
Trigger: ATGGAAACTCCTGGATCGGCATGCAAATACAATCAG...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCTTGTCTCAGTACTTTTaGTGCTGTCCCCATTATCTC +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTLSQYF*CCPHYL
Trigger: GAGATAATGGGGACAGCAGCAAAAGTACTGAGACAA...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTGAGCATTGTCTGCATTaGACAAAGTATCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAEHCLH*TKYHCY
Trigger: ATAGCAGTGATACTTTGTGCAATGCAGACAATGCTC...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTACATGCTCCAATGCATaGTTGAGTTTGTGCAGTATT +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIATCSNA*LSLCSI
Trigger: AATACTGCACAAACTCAAGCATGCATTGGAGCATGT...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCAGTGCTGGTGTCACTaGGTTACCCCAACCATGTCC +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIQCWCH*VTPTMS
Trigger: GGACATGGTTGGGGTAACCCAGTGACACCAGCACTG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCTTCCTAACTGTGGCCTaGCAACCAATGCTTATTTCA +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTFLTVA*QPMLIS
Trigger: TGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAA...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACCAATCAATGGAAAAATaGCGGCGGCCGCTCTCGCGA +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNQSMEK*RRPLSR
Trigger: TCGCGAGAGCGGCCGCCGCCATTTTTCCATTGATTG...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS-3UTR CCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTTCTTTCGGGACCAGTTaGTTCTCCTCGCCGGGCACC +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEASFGTS*FSSPGT
Trigger: GGTGCCCGGCGAGGAGAACCAACTGGTCCCGAAAGA...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCCAAACTCTTGATTGCTaGCATACACTCGAAAGACCT +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTQTLDC*HTLERP
Trigger: AGGTCTTTCGAGTGTATGCCAGCAATCAAGAGTTTG...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAAGCTGGTGCAGGAGTTaGCAGGGACAGCACATCTTG +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVSWCRS*QGQHIL
Trigger: CAAGATGTGCTGTCCCTGCCAACTCCTGCACCAGCT...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGCTCATTGCTAAGAAGTaGTTAGCACATGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWLIAKK*LAHVFP
Trigger: GGGGAAGACATGTGCTAACCACTTCTTAGCAATGAG...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTGTCACTGGCATTCCTTaGCTCATGGGCCCCTTCATC +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIVTGIP*LMGPFI
Trigger: GATGAAGGGGCCCATGAGCCAAGGAATGCCAGTGAC...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CAA 72 bp TCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTaGTTTCTTTGGCCAGAATGCACCCCTCACCTTGAG +
Preference number: 4 (lower is better)
Translates to: SATHGMVLKPQL*FLWPECTPHLE
Trigger: CTCAAGGTGAGGGGTGCATTCTGGCCAAAGAAACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTTCCTTCAGCTTGCCTTaGTATAGCTCATTTATAAGA +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIASFSLP*YSSFIR
Trigger: TCTTATAAATGAGCTATATCAAGGCAAGCTGAAGGA...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGACCCATAAGGTCGGATaGCCAATGGAATATCAAGAT +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWTHKVG*PMEYQD
Trigger: ATCTTGATATTCCATTGGTCATCCGACCTTATGGGT...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGTTCCTACAGGTCCTTTaGCTCTTTCACAGTCATCAT +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWFLQVL*LFHSHH
Trigger: ATGATGACTGTGAAAGAGTCAAAGGACCTGTAGGAA...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGCCTCTCATTGAGAGGTaGTTCGATGTTTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWPLIER*FDVFKV
Trigger: GACTTTGAAAACATCGAATCACCTCTCAATGAGAGG...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTAAAGTATCACTGCTATaGCTGGAGCTAAGAATATCA +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAKVSLL*LELRIS
Trigger: TGATATTCTTAGCTCCAGTCATAGCAGTGATACTTT...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTCTGTATCTAACCAAATaGTCACAGCCTCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RPVQISYTRHGPETTAFVLYLTK*SQPPSS
Trigger: GGAAGAGGGAGGCTGTGATCATTTGGTTAGATACAG...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGTCTGACCTGGTGAGCTaGCACTCAGTTGAGATCAAT +
Preference number: 4 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQSDLVS*HSVEIN
Trigger: ATTGATCTCAACTGAGTGTCAGCTCACCAGGTCAGA...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCTAGGGCTGGCCCCATaGCCCAGGAAATGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYLGLAP*PRKCKG
Trigger: CCCCTTACATTTCCTGGGTCATGGGGCCAGCCCTAG...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGATTCGTCCACACTACTaGTTTCCAATACAACCTCCT +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWIRPHY*FPIQPP
Trigger: AGGAGGTTGTATTGGAAAGCAGTAGTGTGGACGAAT...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTTGCAGCAATCTGAGCTaGCACCTGCTGGGATCGGTC +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEACSNLS*HLLGSV
Trigger: GACCGATCCCAGCAGGTGGCAGCTCAGATTGCTGCA...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTGCTCTTCAAAACCTTTaGATGACTTGTGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RPVQISYTRHGPETTAFVALQNL*MTCGEQ
Trigger: CTGCTCCCCACAAGTCATGCAAAGGTTTTGAAGAGC...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCTCAGCCTGTTCTGTTTaGTTCCATTTCTGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTSACSV*FHFCSK
Trigger: TTTGGAACAGAAATGGAAGCAAACAGAACAGGCTGA...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTTTCCACACTAGCAAATaGTTGGCTGGACCCATAAGG +
Preference number: 4 (lower is better)
Translates to: RPVQISYTRHGPETTAFVFHTSK*LAGPIR
Trigger: CCTTATGGGTCCAGCCAAGCATTTGCTAGTGTGGAA...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGCTCTGGCTGAATAAATaGATGCAATGCTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWLWLNK*MQCFFH
Trigger: GTGGAAGAAGCATTGCATGCATTTATTCAGCCAGAG...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTCCATCCTGCTGTTGCTaGAGTGACAAGCTTTTGAGT +
Preference number: 4 (lower is better)
Translates to: RPVQISYTRHGPETTAFVPSCCC*SDKLLS
Trigger: ACTCAAAAGCTTGTCACTGCAGCAACAGCAGGATGG...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTACCAAGCCATGGCAGATaGCGTCAGGTAAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVPSHGR*RQVNCS
Trigger: TGAGCAGTTTACCTGACGGCATCTGCCATGGCTTGG...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACCATGTCCGGCCAAAATaGCACTACCCAGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNHVRPK*HYPVVV
Trigger: CACTACCACTGGGTAGTGCCATTTTGGCCGGACATG...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTATCGTTAGAGGAGAGCTaGACGTTCCATCTCGGGACT +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVSLEES*TFHLGT
Trigger: AGTCCCGAGATGGAACGTCCAGCTCTCCTCTAACGA...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS-3UTR CCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCGGGAGGTACAGAATTaGCGAGACAGCCATGCAAAC +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIREVQN*RDSHAN
Trigger: GTTTGCATGGCTGTCTCGCCAATTCTGTACCTCCCG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS-3UTR CCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACACTGGTATGATCCAGTaGTGCCTCTTTCGGGACCAG +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNTGMIQ*CLFRDQ
Trigger: CTGGTCCCGAAAGAGGCACCACTGGATCATACCAGT...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS-3UTR CCA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGTGTCTTCCCCAGCACTaGAATCCTCCAGCAGTATTT +
Preference number: 4 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQCLPQH*NPPAVF
Trigger: AAATACTGCTGGAGGATTCCAGTGCTGGGGAAGACA...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCCCTTTGAAGTTGGTATaGAATACTTGTCACTGGATC +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTPLKLV*NTCHWI
Trigger: GATCCAGTGACAAGTATTCCATACCAACTTCAAAGG...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCCAACACCATCATCATTaGAGAAATCGTTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTQHHHH*RNRCSS
Trigger: AGATGAGCAACGATTTCTCCAATGATGATGGTGTTG...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTTTTTGCATTTCTGGCTaGATCCTTCAGTCTATAGAT +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAFCISG*ILQSID
Trigger: ATCTATAGACTGAAGGATCCAGCCAGAAATGCAAAA...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTCTAGTCCACGTAATGTaGTTTAGACTACATTTGCAA +
Preference number: 4 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIALVHVM*FRLHLQ
Trigger: TTGCAAATGTAGTCTAAACCACATTACGTGGACTAG...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTGAGGCTGAAAACAGGTaGGGAGAGGGCAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAEAENR*GEGRWE
Trigger: TTCCCACCTGCCCTCTCCCCACCTGTTTTCAGCCTC...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTGGTTCTCTGGGCCTGTaGGGAGGGAGGATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSGSLGL*GGRMRL
Trigger: CAACCTCATCCTCCCTCCCCACAGGCCCAGAGAACC...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACGTTCCTGCCAAGCCATaGCAGATGCCGTCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNVPAKP*QMPSGK
Trigger: TTTACCTGACGGCATCTGCCATGGCTTGGCAGGAAC...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CAA 72 bp AGCTTTTGTTTCTTTGGCCAGAATGCACCCCTCACCTaGAGTGCCCGCCTTAGAAACACAGGTACTTGGTTC +
Preference number: 4 (lower is better)
Translates to: SFCFFGQNAPLT*SARLRNTGTWF
Trigger: GAACCAAGTACCTGTGTTTCTAAGGCGGGCACTCAAGGTGAGGGGTGCATTCTGGCCAAAGAAACAAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGTATCCCTATAAAATATaGCCGCACCATCATCACAGA +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWYPYKI*PHHHHR
Trigger: TCTGTGATGATGGTGCGGTCATATTTTATAGGGATA...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp AGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCTATCAGAGTCAGTCTTaGGTCAGATCTTTATTTGGT +
Preference number: 4 (lower is better)
Translates to: SWCRSWQGQHILEALWRFYQSQS*VRSLFG
Trigger: ACCAAATAAAGATCTGACTCAAGACTGACTCTGATA...GAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTGCCAACTCCTGCACCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGACTGAGGAACCTCACTaGGGATTACATTTACATAGA +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWTEEPH*GLHLHR
Trigger: TCTATGTAAATGTAATCCTCAGTGAGGTTCCTCAGT...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCGCTCACCTGACTCTCTaGAGCAGAGGGAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSAHLTL*SRGRLT
Trigger: TGTCAGCCTCCCTCTGCTTCAGAGAGTCAGGTGAGC...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTTTATGGATGCTCACCTaGCTCTCTGAAGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYILWMLT*LSEAEG
Trigger: TCCCTCTGCTTCAGAGAGTCAGGTGAGCATCCATAA...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCAAAGATAAGAGATCATaGGGCTCCACCGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSKDKRS*GSTAPG
Trigger: CCCGGGGGCGGTGGAGCCTCATGATCTCTTATCTTT...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTCGAAAGACCTTGAAGTaGGAGGACAAAACTCCAACA +
Preference number: 4 (lower is better)
Translates to: RPVQISYTRHGPETTAFVRKTLK*EDKTPT
Trigger: TGTTGGAGTTTTGTCCTCTCACTTCAAGGTCTTTCG...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAGCACACAGGGCTTGCTaGAAGTGGCCACCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVAHRAC*KWPPQQ
Trigger: CTGCTGAGGTGGCCACTTTCAGCAAGCCCTGTGTGC...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGTTACTAGCGGCTATGTaGACATTTGTCCGCAATAAA +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWLLAAM*TFVRNK
Trigger: TTTATTGCGGACAAATGTGCACATAGCCGCTAGTAA...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACACATCGCTAGGGCTCTaGCTGTTAGGTTATGGATGC +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNTSLGL*LLGYGC
Trigger: GCATCCATAACCTAACAGGCAGAGCCCTAGCGATGT...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGGCCCACTGTCCTCCCTaGCTTCTCGGGCTCTTCGGA +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWAHCPP*LLGLFG
Trigger: TCCGAAGAGCCCGAGAAGGCAGGGAGGACAGTGGGC...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS-3UTR GCA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGAGTTCTTGTACATCATaGTGCTGCCAAGCCTCACTA +
Preference number: 4 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQSSCTS*CCQASL
Trigger: TAGTGAGGCTTGGCAGCAGCATGATGTACAAGAACT...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCTGCTCCACTGTCAGTaGAACTTTCAGTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYILLHCQ*NFQSEE
Trigger: CTCCTCAGACTGAAAGTTGCACTGACAGTGGAGCAG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGTCCAGAGTCTTCTTCTaGTGTATCCCATGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWSRVFF*CIPCFF
Trigger: AAAGAAACATGGGATACAGCAGAAGAAGACTCTGGA...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGTCTCAAACTCTTGATTaGTGGCATACACTCGAAAGA +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWSQTLD*WHTLER
Trigger: TCTTTCGAGTGTATGCCAGCAATCAAGAGTTTGAGA...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAGCCCGCTGCAATCAATaGAAAAATGGCGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVARCNQ*KNGGGR
Trigger: GCGGCCGCCGCCATTTTTCCATTGATTGCAGCGGGC...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS-3UTR CCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCTGGAATACTTGTCACTaGATCTTCTTCAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTWNTCH*IFFRFF
Trigger: GAAGAATCTGAAGAAGATCCAGTGACAAGTATTCCA...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp AGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCGAAATTTTGCATTTCTaGCTGGATCCTTCAGTCTAT +
Preference number: 4 (lower is better)
Translates to: SWCRSWQGQHILEALWRFEILHF*LDPSVY
Trigger: ATAGACTGAAGGATCCAGCCAGAAATGCAAAATTTC...GAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTGCCAACTCCTGCACCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCGCCTTTCAGGACATATaGCCTTATAAGATTTTGACT +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTAFQDI*PYKILT
Trigger: AGTCAAAATCTTATAAGGCCATATGTCCTGAAAGGC...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAGAGGGAAGGGGAGCTTaGTGCCCACCTGTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVEGRGA*CPPVRQ
Trigger: TTGCCTCACAGGTGGGCACCAAGCTCCCCTTCCCTC...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCACCACCAGTCAAGCTaGTGCAGGAGTTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYHHQSS*CRSWQG
Trigger: TCCCTGCCAACTCCTGCACCAGCTTGACTGGTGGTG...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CAA 72 bp GGCCCTACCACAGAAAGAGTCTTTGAGTCCTTGACATaGAGGAGGAAACCAATCCTGTTCTCCACCATCTCT +
Preference number: 4 (lower is better)
Translates to: GPTTERVFESLT*RRKPILFSTIS
Trigger: AGAGATGGTGGAGAACAGGATTGGTTTCCTCCTCAATGTCAAGGACTCAAAGACTCTTTCTGTGGTAGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCATCAGTCTGTACCATaGCCTGACCTCATTAGCAAG +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIHQSVP*PDLISK
Trigger: CTTGCTAATGAGGTCAGGTCATGGTACAGACTGATG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTCAGGGTGTGCATGGTTaGCACAAGTTCATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSQGVHG*HKFICP
Trigger: GGGGCAGATGAACTTGTGTCAACCATGCACACCCTG...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACCCTATAAACCTGTCATaGACACTGTCTTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNPINLS*TLSSPA
Trigger: TGCTGGGGAAGACAGTGTTCATGACAGGTTTATAGG...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGCAGCGCTCCCAGAATaGACCATAACAGAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVAALPE*TITEKS
Trigger: ACTTTTCTCTGTTATGGTTCATTCTGGGAGCGCTGC...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGCCTCTCATTGAGAGGTaGTTCGATGTTTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQPLIER*FDVFKV
Trigger: GACTTTGAAAACATCGAATCACCTCTCAATGAGAGG...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGAAAGTATCACTGCTATaGCTGGAGCTAAGAATATCA +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWKVSLL*LELRIS
Trigger: TGATATTCTTAGCTCCAGTCATAGCAGTGATACTTT...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACTTAGCCAAAGGGATCTaGGCATTGTCTGCATTGCAC +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNLAKGI*ALSALH
Trigger: GTGCAATGCAGACAATGCTCAGATCCCTTTGGCTAA...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCATTATAAAAGAGGCTaGAAACAGGTGGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIHYKRG*KQVGRG
Trigger: CCCTCTCCCCACCTGTTTTCAGCCTCTTTTATAATG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTGTGGGTAACTGCATTTaGCAAAACAATTGGCACAGT +
Preference number: 4 (lower is better)
Translates to: RPVQISYTRHGPETTAFVVGNCI*QNNWHS
Trigger: ACTGTGCCAATTGTTTTGTCAAATGCAGTTACCCAC...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACGGTGGAGGTGGTGCTTaGATACCTTGCTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYGGGGA*IPCCCS
Trigger: AGAGCAGCAGCAAGGTATTCAAGCACCACCTCCACC...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTATTCGTCCACACTACTaGTTTCCAATACAACCTCCT +
Preference number: 4 (lower is better)
Translates to: RPVQISYTRHGPETTAFVIRPHY*FPIQPP
Trigger: AGGAGGTTGTATTGGAAAGCAGTAGTGTGGACGAAT...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTTTCAGCTCCTGTTTTTaGTGCTTTCCAAGAGTCAAC +
Preference number: 4 (lower is better)
Translates to: RPVQISYTRHGPETTAFVFSSCF*CFPRVN
Trigger: GTTGACTCTTGGAAAGCAGCAAAAACAGGAGCTGAA...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACGCTCTTCAAAACCTTTaGATGACTTGTGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNALQNL*MTCGEQ
Trigger: CTGCTCCCCACAAGTCATGCAAAGGTTTTGAAGAGC...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGTGGCCTGGCAACCAATaGTTATTTCATTGGATTATT +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWWPGNQ*LFHWII
Trigger: AATAATCCAATGAAATAAGCATTGGTTGCCAGGCCA...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTATTCCACACTAGCAAATaGTTGGCTGGACCCATAAGG +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVFHTSK*LAGPIR
Trigger: CCTTATGGGTCCAGCCAAGCATTTGCTAGTGTGGAA...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp AGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCAATAAATGCATGCAATaGTTCTTCCACACTAGCAAA +
Preference number: 4 (lower is better)
Translates to: SWCRSWQGQHILEALWRFNKCMQ*FFHTSK
Trigger: TTTGCTAGTGTGGAAGAAGCATTGCATGCATTTATT...GAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTGCCAACTCCTGCACCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCATAGATCAGCATATATaGATTTGTGGAACTTGCGAA +
Preference number: 4 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTIDQHI*ICGTCE
Trigger: TTCGCAAGTTCCACAAATGCATATATGCTGATCTAT...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp AGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCATAGATCAGCATATATaGATTTGTGGAACTTGCGAA +
Preference number: 4 (lower is better)
Translates to: SWCRSWQGQHILEALWRFIDQHI*ICGTCE
Trigger: TTCGCAAGTTCCACAAATGCATATATGCTGATCTAT...GAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTGCCAACTCCTGCACCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCCATCCTGCTGTTGCTaGAGTGACAAGCTTTTGAGT +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIPSCCC*SDKLLS
Trigger: ACTCAAAAGCTTGTCACTGCAGCAACAGCAGGATGG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTTCTCCATCCTGCTGTTaGTGCAGTGACAAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYISPSCC*CSDKLL
Trigger: CAAAAGCTTGTCACTGCAGCAACAGCAGGATGGAGA...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTATCTCCATCCTGCTGTTaGTGCAGTGACAAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVSPSCC*CSDKLL
Trigger: CAAAAGCTTGTCACTGCAGCAACAGCAGGATGGAGA...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACTCTCCATCCTGCTGTTaGTGCAGTGACAAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNSPSCC*CSDKLL
Trigger: CAAAAGCTTGTCACTGCAGCAACAGCAGGATGGAGA...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACCCATTATCTCCATCCTaGTGTTGCTGCAGTGACAAG +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNPLSPS*CCCSDK
Trigger: CTTGTCACTGCAGCAACAGCAGGATGGAGATAATGG...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCCATTATCTCCATCCTaGTGTTGCTGCAGTGACAAG +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIPLSPS*CCCSDK
Trigger: CTTGTCACTGCAGCAACAGCAGGATGGAGATAATGG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTTCTCAGTACTTTTGCTaGTGTCCCCATTATCTCCAT +
Preference number: 4 (lower is better)
Translates to: RPVQISYTRHGPETTAFVSQYFC*CPHYLH
Trigger: ATGGAGATAATGGGGACAGCAGCAAAAGTACTGAGA...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGGCATGCTTGAGTTTGTaGAGTATTCTTGTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWACLSL*SILVSE
Trigger: TTCAGAAACAAGAATACTGCACAAACTCAAGCATGC...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp TCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTCTCTCAACTCTCTTTTaGCCTCCTAGCTTGACCTAC +
Preference number: 4 (lower is better)
Translates to: SWAPSSSNPAMTVLSFSGLSTLF*PPSLTY
Trigger: GTAGGTCAAGCTAGGAGGGCAAAAGAGAGTTGAGAG...ACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACTTTGCTGATAGGACCTaGAGGGCATCTACCTTCATG +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNFADRT*RASTFM
Trigger: CATGAAGGTAGATGCCCTGCAGGTCCTATCAGCAAA...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCATGCAGCTAGGCCCCTaGACACAGGGCTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSMQLGP*TQGLLK
Trigger: TTTCAGCAAGCCCTGTGTGCAGGGGCCTAGCTGCAT...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAGGGAAGGGAGGGGCCTaGTGTAGTGTGAGGGACAAA +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVGKGGA*CSVRDK
Trigger: TTTGTCCCTCACACTACAGCAGGCCCCTCCCTTCCC...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCATGTCCGGCCAAAATaGCACTACCCAGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAHVRPK*HYPVVV
Trigger: CACTACCACTGGGTAGTGCCATTTTGGCCGGACATG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGGCACAGTCTAAAGAGTaGGTATCAGAAGAATTTTAC +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWAQSKE*VSEEFY
Trigger: GTAAAATTCTTCTGATACCCACTCTTTAGACTGTGC...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACCCTTTGCATGACTTGTaGGGAGCAGGGTCACAATTT +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNPLHDL*GAGSQF
Trigger: AAATTGTGACCCTGCTCCCCACAAGTCATGCAAAGG...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCAGCTTTTGTTTCTTTaGCCAGAATGCACCCCTCAC +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIQLLFL*PECTPH
Trigger: GTGAGGGGTGCATTCTGGCCAAAGAAACAAAAGCTG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGTCTTTCGGGACCAGTTaGTTCTCCTCGCCGGGCACC +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWSFGTS*FSSPGT
Trigger: GGTGCCCGGCGAGGAGAACCAACTGGTCCCGAAAGA...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTAAGAACAAAGCCCAACTaGTTCTCTGGGCCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILRTKPN*FSGPVG
Trigger: CCCCACAGGCCCAGAGAACCAGTTGGGCTTTGTTCT...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp TCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTCTGGCTTTCTACAGGTaGGAAAGGTTCTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: SWAPSSSNPAMTVLSFSGLAFYR*ERFSTS
Trigger: AGAAGTGGAGAACCTTTCCCACCTGTAGAAAGCCAG...ACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTACAAAACTGCAAGCTGTaGCATGGACTTCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVQNCKL*HGLHLL
Trigger: GAGAAGATGAAGTCCATGTCACAGCTTGCAGTTTTG...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTATGGCCCATTGGGCACTaGGCTTCTGATTGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVWPIGH*ASDWCR
Trigger: CCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCA...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTTCGGATCTGAAATACTaGCAGGGTTCCCCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYISDLKY*QGSPKL
Trigger: TAACTTTGGGGAACCCTGTCAGTATTTCAGATCCGA...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp TCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTGGTAAAAATCGGATCTaGAATACTGACAGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: SWAPSSSNPAMTVLSFSGGKNRI*NTDRVP
Trigger: GGGAACCCTGTCAGTATTTCAGATCCGATTTTTACC...ACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACGAAGCAGAGGGAGGCTaGCACAGATTAGCTTTTATT +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNEAEGG*HRLAFI
Trigger: AATAAAAGCTAATCTGTGTCAGCCTCCCTCTGCTTC...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTTTCAAAACCTTTGCATaGCTTGTGGGGAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAFKTFA*LVGSRV
Trigger: GACCCTGCTCCCCACAAGTCATGCAAAGGTTTTGAA...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCACACGGCATGGTCCTaGAACCACAGCTTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAHTAWS*NHSFCF
Trigger: GAAACAAAAGCTGTGGTTTCAGGACCATGCCGTGTG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTACCACTGCTCATCACTaGATGACTTTATACATGCAT +
Preference number: 4 (lower is better)
Translates to: RPVQISYTRHGPETTAFVTTAHH*MTLYMH
Trigger: ATGCATGTATAAAGTCATTCAGTGATGAGCAGTGGT...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAATCCTGCTGACATGTTaGTCATTGAAGCTGTACCAC +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVILLTC*SLKLYH
Trigger: GTGGTACAGCTTCAATGATCAACATGTCAGCAGGAT...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACACATATATGTTGACTTaGCGCCACCTAGTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNTYMLT*RHLVEA
Trigger: GGCTTCTACTAGGTGGCGTCAAGTCAACATATATGT...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTGCTGTTGCTGCAGTaGCAAGCTTTTGAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNLLLLQ*QAFEFF
Trigger: GAAAAACTCAAAAGCTTGTCACTGCAGCAACAGCAG...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCTACTTGTGATACTGTaGGAGTCAAGTCCATTAGCC +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYILLVIL*ESSPLA
Trigger: GGCTAATGGACTTGACTCTCACAGTATCACAAGTAG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTACGAAAGACCTTGAAGTaGGAGGACAAAACTCCAACA +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVRKTLK*EDKTPT
Trigger: TGTTGGAGTTTTGTCCTCTCACTTCAAGGTCTTTCG...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACACACTCGAAAGACCTTaGAGTGAGAGGACAAAACTC +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNTLERP*SERTKL
Trigger: GAGTTTTGTCCTCTCACTTCAAGGTCTTTCGAGTGT...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTAACCACATTGCTCCCTaGGCTGAGGAATTAATTCCT +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYINHIAP*AEELIP
Trigger: AGGAATTAATTCCTCAGCTCAGGGAGCAATGTGGTT...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCACTGTCAAATTTCATaGGGGAGCACCAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIHCQIS*GSTNAV
Trigger: AACAGCATTGGTGCTCCCTCATGAAATTTGACAGTG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAGGGCAGTCCAATCAGTaGTGGTGTCACTGGGTTACC +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVGQSNQ*WCHWVT
Trigger: GGTAACCCAGTGACACCAGCACTGATTGGACTGCCC...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTACTGTTAGGTTATGGATaGTCACCTGACTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVLLGYG*SPDSLK
Trigger: CTTCAGAGAGTCAGGTGAGCATCCATAACCTAACAG...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTGTAACAACACTGCAATaGTATGATGCTGTGCGGTCA +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIVTTLQ*YDAVRS
Trigger: TGACCGCACAGCATCATAGCATTGCAGTGTTGTTAC...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGTAACAACACTGCAATaGTATGATGCTGTGCGGTCA +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVVTTLQ*YDAVRS
Trigger: TGACCGCACAGCATCATAGCATTGCAGTGTTGTTAC...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGGCTCTTCGGACTCTCTaGCCTGCAGGGAAAGACTCG +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWALRTL*PAGKDS
Trigger: CGAGTCTTTCCCTGCAGGGCAGAGAGTCCGAAGAGC...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS-3UTR GCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACTCTTGTACATCATGCTaGTGCCAAGCCTCACTACTA +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNSCTSC*CQASLL
Trigger: TAGTAGTGAGGCTTGGCAGCAGCATGATGTACAAGA...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTATCTTGTACATCATGCTaGTGCCAAGCCTCACTACTA +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVSCTSC*CQASLL
Trigger: TAGTAGTGAGGCTTGGCAGCAGCATGATGTACAAGA...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGTTGAAGCTGTACCACTaGTCATCACTGAATGACTTT +
Preference number: 4 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQLKLYH*SSLNDF
Trigger: AAAGTCATTCAGTGATGAGCAGTGGTACAGCTTCAA...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCCCAGAACCTTCATCTaGAGCATAAGGTTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIPRTFI*SIRFSF
Trigger: AAAGCTGAACCTTATGCTGCAGATGAAGGTTCTGGG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTACCCAGAACCTTCATCTaGAGCATAAGGTTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVPRTFI*SIRFSF
Trigger: AAAGCTGAACCTTATGCTGCAGATGAAGGTTCTGGG...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGAATTCCTCTTTTGATTaGCGTACAGTCATTCCTTTA +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWNSSFD*RTVIPL
Trigger: TAAAGGAATGACTGTACGGCAATCAAAAGAGGAATT...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGCAAAGATATTTTGTCTaGATCTCCAAAACACATCCT +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWQRYFV*ISKTHP
Trigger: AGGATGTGTTTTGGAGATGCAGACAAAATATCTTTG...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399455.2
CDS-3UTR CCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTTCCAATACAACCTCCTaGAAGGGATCCAACTTCATC +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYISNTTS*KGSNFI
Trigger: GATGAAGTTGGATCCCTTCCAGGAGGTTGTATTGGA...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACTCCAATACAACCTCCTaGAAGGGATCCAACTTCATC +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNSNTTS*KGSNFI
Trigger: GATGAAGTTGGATCCCTTCCAGGAGGTTGTATTGGA...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACCGATGTCCAGTCTTCTaGAGTCGACTGCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNRCPVF*SRLLSF
Trigger: AAAAGAAAGCAGTCGACTCCAGAAGACTGGACATCG...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGAGTCAGATCTTTATTTaGTGCTCCATCCAGATATAT +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWSQIFI*CSIQIY
Trigger: ATATATCTGGATGGAGCACCAAATAAAGATCTGACT...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTACAGTCCAATCAGTGCTaGTGTCACTGGGTTACCCCA +
Preference number: 4 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILQSNQC*CHWVTP
Trigger: TGGGGTAACCCAGTGACACCAGCACTGATTGGACTG...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp TCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTTTCACAATTCCTTACTaGGTTACGGCTGGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SWAPSSSNPAMTVLSFSGFTIPY*VTAGSK
Trigger: CTTGGAACCAGCCGTAACCCAGTAAGGAATTGTGAA...ACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp TCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTAGAAACACAGGTACTTaGTTCTCACAGGGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: SWAPSSSNPAMTVLSFSGRNTGT*FSQGVH
Trigger: ATGCACACCCTGTGAGAACCAAGTACCTGTGTTTCT...ACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTATCTCTCCTGCTCTCTTaGCCTCTAGATGTATCACAA +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVSLLLS*PLDVSQ
Trigger: TTGTGATACATCTAGAGGCCAAGAGAGCAGGAGAGA...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTCAACACCATCATCATTaGAGAAATCGTTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: RPVQISYTRHGPETTAFVQHHHH*RNRCSS
Trigger: AGATGAGCAACGATTTCTCCAATGATGATGGTGTTG...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGTTTCAGTTCCACTATTaGTTTCAAGACAGATTCCTT +
Preference number: 4 (lower is better)
Translates to: PGSGNLIHIARALPVRLWFQFHY*FQDRFL
Trigger: AAGGAATCTGTCTTGAAACCAATAGTGGAACTGAAA...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAAGCGACATTTGGCTCTaGGGCAGCCATCTGGTGATC +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVSDIWL*GSHLVI
Trigger: GATCACCAGATGGCTGCCCCAGAGCCAAATGTCGCT...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTATCAGGAAGCGACATTTaGCTCTGGGGCAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVSGSDI*LWGSHL
Trigger: CAGATGGCTGCCCCAGAGCCAAATGTCGCTTCCTGA...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGGGGGCTGGGTGGAGGTaGTGCTTGAATACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWGAGWR*CLNTLL
Trigger: CAGCAAGGTATTCAAGCACCACCTCCACCCAGCCCC...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTATTTCTCTTTACGAGGTaGGTATGTTACACGATGTCC +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVFLFTR*VCYTMS
Trigger: GGACATCGTGTAACATACTCACCTCGTAAAGAGAAA...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACTTTCTCTTTACGAGGTaGGTATGTTACACGATGTCC +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNFLFTR*VCYTMS
Trigger: GGACATCGTGTAACATACTCACCTCGTAAAGAGAAA...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTGCAATGAAATCATGTTaGCTGCATCAGTCTGTACCA +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIAMKSC*LHQSVP
Trigger: TGGTACAGACTGATGCAGTCAACATGATTTCATTGC...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACGCAATGAAATCATGTTaGCTGCATCAGTCTGTACCA +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNAMKSC*LHQSVP
Trigger: TGGTACAGACTGATGCAGTCAACATGATTTCATTGC...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTACATGGAATTCTCGGTaGTTATATTCAAATGGCAGA +
Preference number: 4 (lower is better)
Translates to: RPVQISYTRHGPETTAFVTWNSR*LYSNGR
Trigger: TCTGCCATTTGAATATAATCACCGAGAATTCCATGT...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTCCAAACACTCTAGTGTaGAGGCTGCTTCACACACTG +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSPNTLV*RLLHTL
Trigger: CAGTGTGTGAAGCAGCCTTCACACTAGAGTGTTTGG...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTTTTCTGACTGGGACATaGGTTCATCGCATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAFLTGT*VHRIFP
Trigger: TGGGAAGATGCGATGAACTCATGTCCCAGTCAGAAA...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTGACTTGTCACTGGTATaGTCCAGTGGTGCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSDLSLV*SSGASF
Trigger: GAAAGAGGCACCACTGGATCATACCAGTGACAAGTC...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS-3UTR TCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTATCCTCCAGCAGTATTTaGGGTTGTTCACCATCTTTA +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVSSSSI*GCSPSL
Trigger: TAAAGATGGTGAACAACCTCAAATACTGCTGGAGGA...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCGTTCACAAAAATACTaGTTTGGGCCATCCAGAATC +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIRSQKY*FGPSRI
Trigger: GATTCTGGATGGCCCAAATCAGTATTTTTGTGAACG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACTTCCTACAGGTCCTTTaGCTCTTTCACAGTCATCAT +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNFLQVL*LFHSHH
Trigger: ATGATGACTGTGAAAGAGTCAAAGGACCTGTAGGAA...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTTTAGCCAAAGGGATCTaGGCATTGTCTGCATTGCAC +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEALAKGI*ALSALH
Trigger: GTGCAATGCAGACAATGCTCAGATCCCTTTGGCTAA...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACCATTGCTCCCTGAGCTaGGGAATTAATTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNHCSLS*GINSSF
Trigger: AAAAGAGGAATTAATTCCTCAGCTCAGGGAGCAATG...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTGAAACCTGTCAATACTaGGCTCTAAACCACATTGCT +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIETCQY*ALNHIA
Trigger: AGCAATGTGGTTTAGAGCTCAGTATTGACAGGTTTC...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTGACTTGTCACTGGTATaGTCCAGTGGTGCCATATCA +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEADLSLV*SSGAIS
Trigger: TGATATGGCACCACTGGATCATACCAGTGACAAGTC...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp TCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTAGCTCCTGTTTTTGCTaGTTTCCAAGAGTCAACACA +
Preference number: 4 (lower is better)
Translates to: SWAPSSSNPAMTVLSFSGSSCFC*FPRVNT
Trigger: TGTGTTGACTCTTGGAAAGCAGCAAAAACAGGAGCT...ACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATTGCAGCAATCTGAGCTaGCACCTGCTGGGATCGGTC +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYCSNLS*HLLGSV
Trigger: GACCGATCCCAGCAGGTGGCAGCTCAGATTGCTGCA...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCCTCCCCCAGCCCGCTaGAATCAATGGAAAAATGGC +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWPPPAR*NQWKNG
Trigger: GCCATTTTTCCATTGATTGCAGCGGGCTGGGGGAGG...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS-3UTR GCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTACTCTGGCTGAATAAATaGATGCAATGCTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVLWLNK*MQCFFH
Trigger: GTGGAAGAAGCATTGCATGCATTTATTCAGCCAGAG...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTACTACCTTCATTTTCTaGTCCACTGTCAGTGCAACT +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYITTFIF*STVSAT
Trigger: AGTTGCACTGACAGTGGAGCAGAAAATGAAGGTAGT...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp TCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTACTACCTTCATTTTCTaGTCCACTGTCAGTGCAACT +
Preference number: 4 (lower is better)
Translates to: SWAPSSSNPAMTVLSFSGTTFIF*STVSAT
Trigger: AGTTGCACTGACAGTGGAGCAGAAAATGAAGGTAGT...ACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACCATTGGAGAAATCGTTaGTCATCTGATCACTGTGAC +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNHWRNR*SSDHCD
Trigger: GTCACAGTGATCAGATGAGCAACGATTTCTCCAATG...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTACTGATTGTATTTGCATaGCGATCCAGGAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVLIVFA*RSRSFH
Trigger: ATGGAAACTCCTGGATCGGCATGCAAATACAATCAG...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTGATTGTATTTGCATaGCGATCCAGGAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNLIVFA*RSRSFH
Trigger: ATGGAAACTCCTGGATCGGCATGCAAATACAATCAG...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGTTCATCTTCAAATCCTaGAATGACAGTTCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQFIFKS*NDSSVL
Trigger: AAGGACAGAACTGTCATTGCAGGATTTGAAGATGAA...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCAAGAATGGAGCTCCTaGCCTCCATCCACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWQEWSS*PPSTSP
Trigger: AGGGGAAGTGGATGGAGGGCAGGAGCTCCATTCTTG...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCGCAACGACAATCCTATaGGACCTAGCACTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSATTIL*DLALRN
Trigger: GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTTTCCTAACTGTGGCCTaGCAACCAATGCTTATTTCA +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIFLTVA*QPMLIS
Trigger: TGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAA...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTATGTAGCCTACTTTGTTaGCCACATCTTCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVCSLLC*PHLQRA
Trigger: AGCTCTTTGAAGATGTGGCCAACAAAGTAGGCTACA...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTACTGGTATGATCCAGTaGTGCCATATCAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYITGMIQ*CHISSI
Trigger: AATACTGCTGATATGGCACCACTGGATCATACCAGT...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTGAAGTGACTTGTCACTaGTATGATCCAGTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAEVTCH*YDPVVP
Trigger: TGGCACCACTGGATCATACCAGTGACAAGTCACTTC...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTAAGGGACAGCACATCTTaGAGGCACTATGGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILRDSTS*RHYGGS
Trigger: TGAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCT...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACGGAGATTGTGGTGTTTaGAAAACAGATTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNGDCGV*KTDSSP
Trigger: AGGGGAAGAATCTGTTTTCCAAACACCACAATCTCC...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CAA 72 bp GAGGGGAACTTTTTGAGACACTCATGGAAGATCAAATaGAGGGTTGAAGACTTGGTAGGGACTAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: EGNFLRHSWKIK*RVEDLVGTSAA
Trigger: TGCTGCACTAGTCCCTACCAAGTCTTCAACCCTCAATTTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATTGGCCCATTGGGCACTaGGCTTCTGATTGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYWPIGH*ASDWCR
Trigger: CCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCA...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTTTTCCAATTTTCTTCTaGGAACATCACCAATCCCAC +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIFPIFF*EHHQSH
Trigger: GTGGGATTGGTGATGTTCTCAGAAGAAAATTGGAAA...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACTTTCTGACTGGGACATaGGTTCATCGCATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYFLTGT*VHRIFP
Trigger: TGGGAAGATGCGATGAACTCATGTCCCAGTCAGAAA...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTATTAGCGTCGAGAAGTaGCTTGTCACTGGTATGATC +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAISVEK*LVTGMI
Trigger: GATCATACCAGTGACAAGTCACTTCTCGACGCTAAT...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACCCAAAGCATCAAACATaGCTCTGCATAGTTCTTGTA +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNPKHQT*LCIVLV
Trigger: TACAAGAACTATGCAGAGTCATGTTTGATGCTTTGG...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTACATATATGTTGACTTaGCGCCACCTAGTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEATYMLT*RHLVEA
Trigger: GGCTTCTACTAGGTGGCGTCAAGTCAACATATATGT...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTATTTTACTGGAGACACTaGGAAGACGCAAATCATTGT +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVFYWRH*EDANHC
Trigger: ACAATGATTTGCGTCTTCTCAGTGTCTCCAGTAAAA...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCTTAGCCAAAGGGATCTaGGCATTGTCTGCATTGCAC +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSLAKGI*ALSALH
Trigger: GTGCAATGCAGACAATGCTCAGATCCCTTTGGCTAA...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCTACTTGTGATACTGTaGGAGTCAAGTCCATTAGCC +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEALLVIL*ESSPLA
Trigger: GGCTAATGGACTTGACTCTCACAGTATCACAAGTAG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTTTCTTCTACTACTTGTaGTACTGTGAGAGTCAAGTC +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIFFYYL*YCESQV
Trigger: GACTTGACTCTCACAGTATCACAAGTAGTAGAAGAA...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTACACTCGAAAGACCTTaGAGTGAGAGGACAAAACTC +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEATLERP*SERTKL
Trigger: GAGTTTTGTCCTCTCACTTCAAGGTCTTTCGAGTGT...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACATGGCTCTTGTTCATTaGCCAAAAGCTGGTATACTT +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNMALVH*PKAGIL
Trigger: AAGTATACCAGCTTTTGGTCAATGAACAAGAGCCAT...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATGGGCCTGCTGTAGTGTaGGGGACAAAGACAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYGPAVV*GTKTGR
Trigger: TCTTCCTGTCTTTGTCCCTCACACTACAGCAGGCCC...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCTTGGCGAGACAGCCATaGAAACGCTTTTCGTTAGAG +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSLARQP*KRFSLE
Trigger: CTCTAACGAAAAGCGTTTGCATGGCTGTCTCGCCAA...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS-3UTR GCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACTCAGCCTGTTCTGTTTaGTTCCATTTCTGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNSACSV*FHFCSK
Trigger: TTTGGAACAGAAATGGAAGCAAACAGAACAGGCTGA...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp TCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTTCAGCCTGTTCTGTTTaGTTCCATTTCTGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SWAPSSSNPAMTVLSFSGSACSV*FHFCSK
Trigger: TTTGGAACAGAAATGGAAGCAAACAGAACAGGCTGA...ACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCGTAGTCCTTCAGCTTaGCTTGATATAGCTCATTTA +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIRSPSA*LDIAHL
Trigger: TAAATGAGCTATATCAAGGCAAGCTGAAGGACTACG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTTTCCACACTAGCAAATaGTTGGCTGGACCCATAAGG +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSFHTSK*LAGPIR
Trigger: CCTTATGGGTCCAGCCAAGCATTTGCTAGTGTGGAA...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCGAAGGCCCTTCCGTaGATCACACTTCTTCTTACA +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVPKALP*ITLLLT
Trigger: TGTAAGAAGAAGTGTGATGCACGGAAGGGCCTTCGG...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCCATTATCTCCATCCTaGTGTTGCTGCAGTGACAAG +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYPLSPS*CCCSDK
Trigger: CTTGTCACTGCAGCAACAGCAGGATGGAGATAATGG...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTTCCAGAGTCTTCTTCTaGTGTATCCCATGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYISRVFF*CIPCFF
Trigger: AAAGAAACATGGGATACAGCAGAAGAAGACTCTGGA...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCCCAGAACCTTCATCTaGAGCATAAGGTTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAPRTFI*SIRFSF
Trigger: AAAGCTGAACCTTATGCTGCAGATGAAGGTTCTGGG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACTCTCAAACTCTTGATTaGTGGCATACACTCGAAAGA +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNSQTLD*WHTLER
Trigger: TCTTTCGAGTGTATGCCAGCAATCAAGAGTTTGAGA...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTAGGTATTCCTGTGGTCTaGACATCCTCTCCAGATACT +
Preference number: 4 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILGIPVV*TSSPDT
Trigger: AGTATCTGGAGAGGATGTGCAGACCACAGGAATACC...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTGACACAGGAGCTATTTaGATGATGAACCATAGCCTG +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEADTGAI*MMNHSL
Trigger: CAGGCTATGGTTCATCATGCAAATAGCTCCTGTGTC...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCTGCAAGCTGTGACATaGACTTCATCTTCTCTACCC +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYLQAVT*TSSSLP
Trigger: GGGTAGAGAAGATGAAGTCCATGTCACAGCTTGCAG...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTCTGCAAGCTGTGACATaGACTTCATCTTCTCTACCC +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSLQAVT*TSSSLP
Trigger: GGGTAGAGAAGATGAAGTCCATGTCACAGCTTGCAG...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATCAGTGCTGGTGTCACTaGGTTACCCCAACCATGTCC +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYQCWCH*VTPTMS
Trigger: GGACATGGTTGGGGTAACCCAGTGACACCAGCACTG...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGATTATTTTCTGACTaGGACATGAGTTCATCGCAT +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVGLFSD*DMSSSH
Trigger: ATGCGATGAACTCATGTCCCAGTCAGAAAATAATCC...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACTGTCTTCCCCAGCACTaGAATCCTCCAGCAGTATTT +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYCLPQH*NPPAVF
Trigger: AAATACTGCTGGAGGATTCCAGTGCTGGGGAAGACA...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCCCCAGAACCTTCTCTTaGAAGCGGACCTATAAACCT +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSPRTFS*KRTYKP
Trigger: AGGTTTATAGGTCCGCTTCCAAGAGAAGGTTCTGGG...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCCTTTGAAGTTGGTATaGAATACTTGTCACTGGATC +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIPLKLV*NTCHWI
Trigger: GATCCAGTGACAAGTATTCCATACCAACTTCAAAGG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTAGGTCGGATGACCAATaGAATATCAAGATATGTGTC +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIRSDDQ*NIKICV
Trigger: GACACATATCTTGATATTCCATTGGTCATCCGACCT...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAAGGTCGGATGACCAATaGAATATCAAGATATGTGTC +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVRSDDQ*NIKICV
Trigger: GACACATATCTTGATATTCCATTGGTCATCCGACCT...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACCAGCAGGTAAATGGATaGCCTTTGAAATCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNQQVNG*PLKSVV
Trigger: AACAACTGATTTCAAAGGCCATCCATTTACCTGCTG...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTGAAGTGACTTGTCACTaGTATGATCCAGTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSEVTCH*YDPVVP
Trigger: TGGCACCACTGGATCATACCAGTGACAAGTCACTTC...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTAAAGCCCACTGCCCAGTaGGTAACTGCATTTGACAAA +
Preference number: 4 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILKPTAQ*VTAFDK
Trigger: TTTGTCAAATGCAGTTACCCACTGGGCAGTGGGCTT...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACTGCCAGCAGGAGGCTaGCAAGACACTGTCAAATTT +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVLPAGG*QDTVKF
Trigger: AAATTTGACAGTGTCTTGCCAGCCTCCTGCTGGCAG...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTGGTGAAATCCCCTTTTaGGAGATTGTGGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAGEIPF*EIVVFG
Trigger: TCCAAACACCACAATCTCCCAAAAGGGGATTTCACC...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTAGCATTCCTTGGCTCATaGGCCCCTTCATCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILAFLGS*APSSSN
Trigger: ATTTGAAGATGAAGGGGCCCATGAGCCAAGGAATGC...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGAGTGGCAAACAAGAATaGAGCTCCTGCCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWSGKQE*SSCPPS
Trigger: GGATGGAGGGCAGGAGCTCCATTCTTGTTTGCCACT...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CAA 72 bp AGACACTCATGGAAGATCAAATTGAGGGTTGAAGACTaGGTAGGGACTAGTGCAGCATGGGATAGTGGTATT +
Preference number: 4 (lower is better)
Translates to: RHSWKIKLRVED*VGTSAAWDSGI
Trigger: AATACCACTATCCCATGCTGCACTAGTCCCTACCAAGTCTTCAACCCTCAATTTGATCTTCCATGAGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCCAAAACTGCAAGCTGTaGCATGGACTTCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSQNCKL*HGLHLL
Trigger: GAGAAGATGAAGTCCATGTCACAGCTTGCAGTTTTG...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCAAAACTGCAAGCTGTaGCATGGACTTCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYQNCKL*HGLHLL
Trigger: GAGAAGATGAAGTCCATGTCACAGCTTGCAGTTTTG...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCGTTGGATTTACTTCTaGATTGTCAATGAGGTAATG +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIRWIYF*IVNEVM
Trigger: CATTACCTCATTGACAATTCAGAAGTAAATCCAACG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTTCGGATCTGAAATACTaGCAGGGTTCCCCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSSDLKY*QGSPKL
Trigger: TAACTTTGGGGAACCCTGTCAGTATTTCAGATCCGA...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTGGTAAAAATCGGATCTaGAATACTGACAGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSGKNRI*NTDRVP
Trigger: GGGAACCCTGTCAGTATTTCAGATCCGATTTTTACC...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTACATGGAATTCTCGGTaGTTATATTCAAATGGCAGA +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYITWNSR*LYSNGR
Trigger: TCTGCCATTTGAATATAATCACCGAGAATTCCATGT...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTGAAGCAGAGGGAGGCTaGCACAGATTAGCTTTTATT +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSEAEGG*HRLAFI
Trigger: AATAAAAGCTAATCTGTGTCAGCCTCCCTCTGCTTC...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCCAAACACTCTAGTGTaGAGGCTGCTTCACACACTG +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWPNTLV*RLLHTL
Trigger: CAGTGTGTGAAGCAGCCTTCACACTAGAGTGTTTGG...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTACCCATAAGGTCGGATaGCCAATGGAATATCAAGAT +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEATHKVG*PMEYQD
Trigger: ATCTTGATATTCCATTGGTCATCCGACCTTATGGGT...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCGTTCACAAAAATACTaGTTTGGGCCATCCAGAATC +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEARSQKY*FGPSRI
Trigger: GATTCTGGATGGCCCAAATCAGTATTTTTGTGAACG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAGCAGCGCTCCCAGAATaGACCATAACAGAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVAALPE*TITEKS
Trigger: ACTTTTCTCTGTTATGGTTCATTCTGGGAGCGCTGC...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACATCCTGCTGACATGTTaGTCATTGAAGCTGTACCAC +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYILLTC*SLKLYH
Trigger: GTGGTACAGCTTCAATGATCAACATGTCAGCAGGAT...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACAGGAGTTTCCATAAATaGGAGTCTGCAAAGGCCATC +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYRSFHK*ESAKAI
Trigger: GATGGCCTTTGCAGACTCTCATTTATGGAAACTCCT...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCTGCTGTTGCTGCAGTaGCAAGCTTTTGAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYLLLLQ*QAFEFF
Trigger: GAAAAACTCAAAAGCTTGTCACTGCAGCAACAGCAG...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCCTGCTGTTGCTGCAGTaGCAAGCTTTTGAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSLLLLQ*QAFEFF
Trigger: GAAAAACTCAAAAGCTTGTCACTGCAGCAACAGCAG...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACGATCGTTCTTCAGACTaGAAATTTTCTGGATCAGAA +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNDRSSD*KFSGSE
Trigger: TTCTGATCCAGAAAATTTTCAGTCTGAAGAACGATC...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTAAAGTATCACTGCTATaGCTGGAGCTAAGAATATCA +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYIKVSLL*LELRIS
Trigger: TGATATTCTTAGCTCCAGTCATAGCAGTGATACTTT...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCCTACTTGTGATACTGTaGGAGTCAAGTCCATTAGCC +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSLLVIL*ESSPLA
Trigger: GGCTAATGGACTTGACTCTCACAGTATCACAAGTAG...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTACACTCGAAAGACCTTaGAGTGAGAGGACAAAACTC +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSTLERP*SERTKL
Trigger: GAGTTTTGTCCTCTCACTTCAAGGTCTTTCGAGTGT...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAACGCTCTCAAACTCTTaGTTGCTGGCATACACTCGA +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVTLSNS*LLAYTR
Trigger: TCGAGTGTATGCCAGCAATCAAGAGTTTGAGAGCGT...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCTGGTAAATTTAAAGTaGTCCGTTCATTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYILVNLK*SVHSLS
Trigger: AGACAGTGAATGAACGGATCACTTTAAATTTACCAG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTCTGAGGGGAACTTTTTaGGACACTCATGGAAGATCA +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSLRGTF*DTHGRS
Trigger: TGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAG...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTACTGTTAGGTTATGGATaGTCACCTGACTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILLLGYG*SPDSLK
Trigger: CTTCAGAGAGTCAGGTGAGCATCCATAACCTAACAG...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACTGGCCTGGCAACCAATaGTTATTTCATTGGATTATT +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNWPGNQ*LFHWII
Trigger: AATAATCCAATGAAATAAGCATTGGTTGCCAGGCCA...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCCGAAGGCCCTTCCGTaGATCACACTTCTTCTTACA +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWPKALP*ITLLLT
Trigger: TGTAAGAAGAAGTGTGATGCACGGAAGGGCCTTCGG...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTACTACCTTCATTTTCTaGTCCACTGTCAGTGCAACT +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEATTFIF*STVSAT
Trigger: AGTTGCACTGACAGTGGAGCAGAAAATGAAGGTAGT...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACAATCCAAAAAGACAGTaGCAGGATTCTTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNNPKRQ*QDSSMF
Trigger: AAACATGGAAGAATCCTGGCACTGTCTTTTTGGATT...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTAATCCAAAAAGACAGTaGCAGGATTCTTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYINPKRQ*QDSSMF
Trigger: AAACATGGAAGAATCCTGGCACTGTCTTTTTGGATT...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAGATAGTGGTATTCACTaGAGAGAAGTGTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVDSGIH*REVSAS
Trigger: GCTGGCAGACACTTCTCTGCAGTGAATACCACTATC...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTATGCCGTCAGGTAAACTaGTCAACAGCTGTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVCRQVN*STAVLS
Trigger: ACTGAGAACAGCTGTTGAGCAGTTTACCTGACGGCA...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCTTCACAATTCCTTACTaGGTTACGGCTGGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSFTIPY*VTAGSK
Trigger: CTTGGAACCAGCCGTAACCCAGTAAGGAATTGTGAA...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACAGAAACACAGGTACTTaGTTCTCACAGGGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYRNTGT*FSQGVH
Trigger: ATGCACACCCTGTGAGAACCAAGTACCTGTGTTTCT...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCTCTCTCCTGCTCTCTTaGCCTCTAGATGTATCACAA +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSSLLLS*PLDVSQ
Trigger: TTGTGATACATCTAGAGGCCAAGAGAGCAGGAGAGA...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCCAGAACCTTCTCTTaGAAGCGGACCTATAAACCT +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVPRTFS*KRTYKP
Trigger: AGGTTTATAGGTCCGCTTCCAAGAGAAGGTTCTGGG...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACTTTTGCATTTCTGGCTaGATCCTTCAGTCTATAGAT +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNFCISG*ILQSID
Trigger: ATCTATAGACTGAAGGATCCAGCCAGAAATGCAAAA...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp TCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTTTTTGCATTTCTGGCTaGATCCTTCAGTCTATAGAT +
Preference number: 4 (lower is better)
Translates to: SWAPSSSNPAMTVLSFSGFCISG*ILQSID
Trigger: ATCTATAGACTGAAGGATCCAGCCAGAAATGCAAAA...ACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp TCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTCTAGTCCACGTAATGTaGTTTAGACTACATTTGCAA +
Preference number: 4 (lower is better)
Translates to: SWAPSSSNPAMTVLSFSGLVHVM*FRLHLQ
Trigger: TTGCAAATGTAGTCTAAACCACATTACGTGGACTAG...ACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGGGGACTAGTGCAGCATaGGATAGTGGTATTCACTGC +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWGTSAA*DSGIHC
Trigger: GCAGTGAATACCACTATCCCATGCTGCACTAGTCCC...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTTTTCTCTTTACGAGGTaGGTATGTTACACGATGTCC +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSFLFTR*VCYTMS
Trigger: GGACATCGTGTAACATACTCACCTCGTAAAGAGAAA...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCATCAGTCTGTACCATaGCCTGACCTCATTAGCAAG +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWHQSVP*PDLISK
Trigger: CTTGCTAATGAGGTCAGGTCATGGTACAGACTGATG...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTGCAATGAAATCATGTTaGCTGCATCAGTCTGTACCA +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSAMKSC*LHQSVP
Trigger: TGGTACAGACTGATGCAGTCAACATGATTTCATTGC...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTTTTCCAATTTTCTTCTaGGAACATCACCAATCCCAC +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAFPIFF*EHHQSH
Trigger: GTGGGATTGGTGATGTTCTCAGAAGAAAATTGGAAA...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTTCCTCCAGCAGTATTTaGGGTTGTTCACCATCTTTA +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSSSSSI*GCSPSL
Trigger: TAAAGATGGTGAACAACCTCAAATACTGCTGGAGGA...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCACCCATAAGGTCGGATaGCCAATGGAATATCAAGAT +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSTHKVG*PMEYQD
Trigger: ATCTTGATATTCCATTGGTCATCCGACCTTATGGGT...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTACGTTCACAAAAATACTaGTTTGGGCCATCCAGAATC +
Preference number: 4 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILRSQKY*FGPSRI
Trigger: GATTCTGGATGGCCCAAATCAGTATTTTTGTGAACG...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCGTGCAACTTTCAGTCTaGGGAGATTTCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSVQLSV*GDFSSS
Trigger: TGAAGATGAGAAATCTCCTCAGACTGAAAGTTGCAC...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACGTGCAACTTTCAGTCTaGGGAGATTTCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYVQLSV*GDFSSS
Trigger: TGAAGATGAGAAATCTCCTCAGACTGAAAGTTGCAC...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAATCCTGCTGACATGTTaGTCATTGAAGCTGTACCAC +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVILLTC*SLKLYH
Trigger: GTGGTACAGCTTCAATGATCAACATGTCAGCAGGAT...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCATATCCTCTGCTTCCTaGAGATCCACCATGTGTTTT +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSISSAS*RSTMCF
Trigger: AAAACACATGGTGGATCTTCAGGAAGCAGAGGATAT...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAACATATATGTTGACTTaGCGCCACCTAGTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVTYMLT*RHLVEA
Trigger: GGCTTCTACTAGGTGGCGTCAAGTCAACATATATGT...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTTTTTACTGGAGACACTaGGAAGACGCAAATCATTGT +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAFYWRH*EDANHC
Trigger: ACAATGATTTGCGTCTTCTCAGTGTCTCCAGTAAAA...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAAGGAGTTTCCATAAATaGGAGTCTGCAAAGGCCATC +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVRSFHK*ESAKAI
Trigger: GATGGCCTTTGCAGACTCTCATTTATGGAAACTCCT...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACAAGAGTCCCTCTCATTaGGAGGTGATTCGATGTTTT +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYKSPSH*EVIRCF
Trigger: AAAACATCGAATCACCTCTCAATGAGAGGGACTCTT...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACGAAAGACCTTGAAGTaGGAGGACAAAACTCCAACA +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVRKTLK*EDKTPT
Trigger: TGTTGGAGTTTTGTCCTCTCACTTCAAGGTCTTTCG...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTCATTGCTCCCTGAGCTaGGGAATTAATTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSHCSLS*GINSSF
Trigger: AAAAGAGGAATTAATTCCTCAGCTCAGGGAGCAATG...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTAGAAACCTGTCAATACTaGGCTCTAAACCACATTGCT +
Preference number: 4 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILETCQY*ALNHIA
Trigger: AGCAATGTGGTTTAGAGCTCAGTATTGACAGGTTTC...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTAATTCGTCCACACTACTaGTTTCCAATACAACCTCCT +
Preference number: 4 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILIRPHY*FPIQPP
Trigger: AGGAGGTTGTATTGGAAAGCAGTAGTGTGGACGAAT...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTAGCTCCTGTTTTTGCTaGTTTCCAAGAGTCAACACA +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSSSCFC*FPRVNT
Trigger: TGTGTTGACTCTTGGAAAGCAGCAAAAACAGGAGCT...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCAGCTCCTGTTTTTGCTaGTTTCCAAGAGTCAACACA +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSSSCFC*FPRVNT
Trigger: TGTGTTGACTCTTGGAAAGCAGCAAAAACAGGAGCT...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATACATCGCTAGGGCTCTaGCTGTTAGGTTATGGATGC +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYTSLGL*LLGYGC
Trigger: GCATCCATAACCTAACAGGCAGAGCCCTAGCGATGT...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCGTAGTCCTTCAGCTTaGCTTGATATAGCTCATTTA +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEARSPSA*LDIAHL
Trigger: TAAATGAGCTATATCAAGGCAAGCTGAAGGACTACG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAAATAAATGCATGCAATaGTTCTTCCACACTAGCAAA +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVNKCMQ*FFHTSK
Trigger: TTTGCTAGTGTGGAAGAAGCATTGCATGCATTTATT...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACAATAAATGCATGCAATaGTTCTTCCACACTAGCAAA +
Preference number: 4 (lower is better)
Translates to: ETSLTRATTILWDLALRNNKCMQ*FFHTSK
Trigger: TTTGCTAGTGTGGAAGAAGCATTGCATGCATTTATT...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATCTGCTCCACTGTCAGTaGAACTTTCAGTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYLLHCQ*NFQSEE
Trigger: CTCCTCAGACTGAAAGTTGCACTGACAGTGGAGCAG...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTCATTGGAGAAATCGTTaGTCATCTGATCACTGTGAC +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSHWRNR*SSDHCD
Trigger: GTCACAGTGATCAGATGAGCAACGATTTCTCCAATG...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTTCTCAGTACTTTTGCTaGTGTCCCCATTATCTCCAT +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSSQYFC*CPHYLH
Trigger: ATGGAGATAATGGGGACAGCAGCAAAAGTACTGAGA...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTTTGTCTCAGTACTTTTaGTGCTGTCCCCATTATCTC +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSLSQYF*CCPHYL
Trigger: GAGATAATGGGGACAGCAGCAAAAGTACTGAGACAA...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTGAGCATTGTCTGCATTaGACAAAGTATCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAEHCLH*TKYHCY
Trigger: ATAGCAGTGATACTTTGTGCAATGCAGACAATGCTC...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCACATACACAGAGTTTTaGCTTTCAGGACATATGGCC +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSTYTEF*LSGHMA
Trigger: GGCCATATGTCCTGAAAGGCAAAACTCTGTGTATGT...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTATCCAATACAACCTCCTaGAAGGGATCCAACTTCATC +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVSNTTS*KGSNFI
Trigger: GATGAAGTTGGATCCCTTCCAGGAGGTTGTATTGGA...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTAGTCAGATCTTTATTTaGTGCTCCATCCAGATATAT +
Preference number: 4 (lower is better)
Translates to: ATTILWDLALRNLTEDYISQIFI*CSIQIY
Trigger: ATATATCTGGATGGAGCACCAAATAAAGATCTGACT...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCCTTTGCATGACTTGTaGGGAGCAGGGTCACAATTT +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWPLHDL*GAGSQF
Trigger: AAATTGTGACCCTGCTCCCCACAAGTCATGCAAAGG...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTGGATTATTTTCTGACTaGGACATGAGTTCATCGCAT +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAGLFSD*DMSSSH
Trigger: ATGCGATGAACTCATGTCCCAGTCAGAAAATAATCC...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCCTTCCAGTCAGAATaGACAGCGTTTTATTTGCTC +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVPFQSE*TAFYLL
Trigger: GAGCAAATAAAACGCTGTCCATTCTGACTGGAAGGG...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS-3UTR CCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGTGTCTTCCCCAGCACTaGAATCCTCCAGCAGTATTT +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWCLPQH*NPPAVF
Trigger: AAATACTGCTGGAGGATTCCAGTGCTGGGGAAGACA...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTATTTCAGTTCCACTATTaGTTTCAAGACAGATTCCTT +
Preference number: 4 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVFQFHY*FQDRFL
Trigger: AAGGAATCTGTCTTGAAACCAATAGTGGAACTGAAA...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTCAAACTCTTGATTGCTaGCATACACTCGAAAGACCT +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSQTLDC*HTLERP
Trigger: AGGTCTTTCGAGTGTATGCCAGCAATCAAGAGTTTG...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCTGTAGCCTACTTTGTTaGCCACATCTTCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSCSLLC*PHLQRA
Trigger: AGCTCTTTGAAGATGTGGCCAACAAAGTAGGCTACA...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACTATCCCTATAAAATATaGCCGCACCATCATCACAGA +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYYPYKI*PHHHHR
Trigger: TCTGTGATGATGGTGCGGTCATATTTTATAGGGATA...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTCTTCTGAATTGTCAATaGGGTAATGTGTGCATCAGT +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSLLNCQ*GNVCIS
Trigger: ACTGATGCACACATTACCTCATTGACAATTCAGAAG...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCGTTGGATTTACTTCTaGATTGTCAATGAGGTAATG +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEARWIYF*IVNEVM
Trigger: CATTACCTCATTGACAATTCAGAAGTAAATCCAACG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATCATCAGTCTGTACCATaGCCTGACCTCATTAGCAAG +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYHQSVP*PDLISK
Trigger: CTTGCTAATGAGGTCAGGTCATGGTACAGACTGATG...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGGAAGCAGAGGGAGGCTaGCACAGATTAGCTTTTATT +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWEAEGG*HRLAFI
Trigger: AATAAAAGCTAATCTGTGTCAGCCTCCCTCTGCTTC...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATCCTATAAACCTGTCATaGACACTGTCTTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYPINLS*TLSSPA
Trigger: TGCTGGGGAAGACAGTGTTCATGACAGGTTTATAGG...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCCCAAAGCATCAAACATaGCTCTGCATAGTTCTTGTA +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSPKHQT*LCIVLV
Trigger: TACAAGAACTATGCAGAGTCATGTTTGATGCTTTGG...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTTCCTTCAGCTTGCCTTaGTATAGCTCATTTATAAGA +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEASFSLP*YSSFIR
Trigger: TCTTATAAATGAGCTATATCAAGGCAAGCTGAAGGA...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATGCAGCGCTCCCAGAATaGACCATAACAGAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYAALPE*TITEKS
Trigger: ACTTTTCTCTGTTATGGTTCATTCTGGGAGCGCTGC...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCACCACTGCTCATCACTaGATGACTTTATACATGCAT +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSTTAHH*MTLYMH
Trigger: ATGCATGTATAAAGTCATTCAGTGATGAGCAGTGGT...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTAACCACTGCTCATCACTaGATGACTTTATACATGCAT +
Preference number: 4 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILTTAHH*MTLYMH
Trigger: ATGCATGTATAAAGTCATTCAGTGATGAGCAGTGGT...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTTTTTACTGGAGACACTaGGAAGACGCAAATCATTGT +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSFYWRH*EDANHC
Trigger: ACAATGATTTGCGTCTTCTCAGTGTCTCCAGTAAAA...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCAATATCACTGTCCACTaGACTTGTACTCCTGTCATT +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSNITVH*TCTPVI
Trigger: AATGACAGGAGTACAAGTTCAGTGGACAGTGATATT...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACTTCTTCTACTACTTGTaGTACTGTGAGAGTCAAGTC +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYFFYYL*YCESQV
Trigger: GACTTGACTCTCACAGTATCACAAGTAGTAGAAGAA...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTATGGCTCTTGTTCATTaGCCAAAAGCTGGTATACTT +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSMALVH*PKAGIL
Trigger: AAGTATACCAGCTTTTGGTCAATGAACAAGAGCCAT...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACATGGCTCTTGTTCATTaGCCAAAAGCTGGTATACTT +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYMALVH*PKAGIL
Trigger: AAGTATACCAGCTTTTGGTCAATGAACAAGAGCCAT...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGAACCACATTGCTCCCTaGGCTGAGGAATTAATTCCT +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWNHIAP*AEELIP
Trigger: AGGAATTAATTCCTCAGCTCAGGGAGCAATGTGGTT...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTATCTGTGGTTTCAATTaGTCTCTTTTTGCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAICGFN*SLFAGL
Trigger: CAAACCAGCAAAAAGAGAGCAATTGAAACCACAGAT...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTTTGAAGCTGTACCACTaGTCATCACTGAATGACTTT +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSLKLYH*SSLNDF
Trigger: AAAGTCATTCAGTGATGAGCAGTGGTACAGCTTCAA...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTTCCAGCTTTCTGGTATaGTGTCCTTTTGGAATAAGA +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSSSFLV*CPFGIR
Trigger: TCTTATTCCAAAAGGACAGCATACCAGAAAGCTGGA...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTATCTCAAACTCTTGATTaGTGGCATACACTCGAAAGA +
Preference number: 4 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILSQTLD*WHTLER
Trigger: TCTTTCGAGTGTATGCCAGCAATCAAGAGTTTGAGA...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTAACCTTAATTGCATCTaGAAAATCTCTTTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEANLNCI*KISFAL
Trigger: CAGGGCAAAAGAGATTTTGCAGATGCAATTAAGGTT...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCGATGTCCAGTCTTCTaGAGTCGACTGCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWRCPVF*SRLLSF
Trigger: AAAAGAAAGCAGTCGACTCCAGAAGACTGGACATCG...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTATTCCTAACTGTGGCCTaGCAACCAATGCTTATTTCA +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVFLTVA*QPMLIS
Trigger: TGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAA...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGTCTCTCCTGCTCTCTTaGCCTCTAGATGTATCACAA +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWSLLLS*PLDVSQ
Trigger: TTGTGATACATCTAGAGGCCAAGAGAGCAGGAGAGA...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTAAGGTCGGATGACCAATaGAATATCAAGATATGTGTC +
Preference number: 4 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILRSDDQ*NIKICV
Trigger: GACACATATCTTGATATTCCATTGGTCATCCGACCT...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTCAGCAGGTAAATGGATaGCCTTTGAAATCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSQQVNG*PLKSVV
Trigger: AACAACTGATTTCAAAGGCCATCCATTTACCTGCTG...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCAGCAGGTAAATGGATaGCCTTTGAAATCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYQQVNG*PLKSVV
Trigger: AACAACTGATTTCAAAGGCCATCCATTTACCTGCTG...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACTATCAGAGTCAGTCTTaGGTCAGATCTTTATTTGGT +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYYQSQS*VRSLFG
Trigger: ACCAAATAAAGATCTGACTCAAGACTGACTCTGATA...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATACAATTTGTTGCATGTaGCCTGCCTCAGCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYTICCM*PASASK
Trigger: TTTTGAGGCTGAGGCAGGTCACATGCAACAAATTGT...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCAAAGCATCAAACATaGCTCTGCATAGTTCTTGTA +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVPKHQT*LCIVLV
Trigger: TACAAGAACTATGCAGAGTCATGTTTGATGCTTTGG...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATAGGAGTTTCCATAAATaGGAGTCTGCAAAGGCCATC +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYRSFHK*ESAKAI
Trigger: GATGGCCTTTGCAGACTCTCATTTATGGAAACTCCT...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGTTCCTACAGGTCCTTTaGCTCTTTCACAGTCATCAT +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWFLQVL*LFHSHH
Trigger: ATGATGACTGTGAAAGAGTCAAAGGACCTGTAGGAA...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGAAGAGTCCCTCTCATTaGGAGGTGATTCGATGTTTT +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWKSPSH*EVIRCF
Trigger: AAAACATCGAATCACCTCTCAATGAGAGGGACTCTT...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTATCTGGATCAGAAGTCTaGATATGCTGTTCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVSGSEV*ICCSSS
Trigger: AGAACTTGAACAGCATATTCAGACTTCTGATCCAGA...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCGATCGTTCTTCAGACTaGAAATTTTCTGGATCAGAA +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSDRSSD*KFSGSE
Trigger: TTCTGATCCAGAAAATTTTCAGTCTGAAGAACGATC...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACGATCGTTCTTCAGACTaGAAATTTTCTGGATCAGAA +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYDRSSD*KFSGSE
Trigger: TTCTGATCCAGAAAATTTTCAGTCTGAAGAACGATC...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATTCCAATAACAATTTCTaGCCTGGTGAGCTGACACTC +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYSNNNF*PGELTL
Trigger: GAGTGTCAGCTCACCAGGTCAGAAATTGTTATTGGA...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR GCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGTTCAGCTCCTGTTTTTaGTGCTTTCCAAGAGTCAAC +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWFSSCF*CFPRVN
Trigger: GTTGACTCTTGGAAAGCAGCAAAAACAGGAGCTGAA...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCTTATCTATCATGATTaGTCTTCCTTACATACACGT +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEALIYHD*SSLHTR
Trigger: ACGTGTATGTAAGGAAGAGCAATCATGATAGATAAG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACTGGCCTGGCAACCAATaGTTATTTCATTGGATTATT +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYWPGNQ*LFHWII
Trigger: AATAATCCAATGAAATAAGCATTGGTTGCCAGGCCA...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTATCTGTGGTTTCAATTaGTCTCTTTTTGCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSICGFN*SLFAGL
Trigger: CAAACCAGCAAAAAGAGAGCAATTGAAACCACAGAT...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCTCTGGCTGAATAAATaGATGCAATGCTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWLWLNK*MQCFFH
Trigger: GTGGAAGAAGCATTGCATGCATTTATTCAGCCAGAG...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACTTATCTTGCATGTATTaGGCTCAATTTCTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYLSCMY*AQFLVV
Trigger: GACAACGAGAAATTGAGCGCAATACATGCAAGATAA...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGTCTCAGTACTTTTGCTaGTGTCCCCATTATCTCCAT +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWSQYFC*CPHYLH
Trigger: ATGGAGATAATGGGGACAGCAGCAAAAGTACTGAGA...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTAATTCCTCTTTTGATTaGCGTACAGTCATTCCTTTA +
Preference number: 4 (lower is better)
Translates to: QFVACDLPQPQKIRDHEANSSFD*RTVIPL
Trigger: TAAAGGAATGACTGTACGGCAATCAAAAGAGGAATT...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTAATCCAAAAAGACAGTaGCAGGATTCTTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSNPKRQ*QDSSMF
Trigger: AAACATGGAAGAATCCTGGCACTGTCTTTTTGGATT...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCCTAAATAGTAACACATaGTCCAATGCATGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSLNSNT*SNACLS
Trigger: ACTCAAGCATGCATTGGAGCATGTGTTACTATTTAG...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATTTCACAATTCCTTACTaGGTTACGGCTGGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYFTIPY*VTAGSK
Trigger: CTTGGAACCAGCCGTAACCCAGTAAGGAATTGTGAA...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTTGGAATACTTGTCACTaGATCTTCTTCAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSWNTCH*IFFRFF
Trigger: GAAGAATCTGAAGAAGATCCAGTGACAAGTATTCCA...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCTGGAATACTTGTCACTaGATCTTCTTCAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSWNTCH*IFFRFF
Trigger: GAAGAATCTGAAGAAGATCCAGTGACAAGTATTCCA...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCGAAATTTTGCATTTCTaGCTGGATCCTTCAGTCTAT +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSEILHF*LDPSVY
Trigger: ATAGACTGAAGGATCCAGCCAGAAATGCAAAATTTC...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACGAAATTTTGCATTTCTaGCTGGATCCTTCAGTCTAT +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYEILHF*LDPSVY
Trigger: ATAGACTGAAGGATCCAGCCAGAAATGCAAAATTTC...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAGGTATGCTGTCCTTTTaGAATAAGATACTGGGGATT +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVGMLSF*NKILGI
Trigger: AATCCCCAGTATCTTATTCCAAAAGGACAGCATACC...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCCTAGTCCACGTAATGTaGTTTAGACTACATTTGCAA +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSLVHVM*FRLHLQ
Trigger: TTGCAAATGTAGTCTAAACCACATTACGTGGACTAG...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTTTTGATAGCTATGCTTaGTTTCTAAATGCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSFDSYA*FLNAAR
Trigger: CCTAGCTGCATTTAGAAACCAAGCATAGCTATCAAA...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CAA 72 bp TTTATTCCCTTGGCTGAAACTTCTGAGGGGAACTTTTaGAGACACTCATGGAAGATCAAATTGAGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: FIPLAETSEGNF*RHSWKIKLRVE
Trigger: TTCAACCCTCAATTTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CAA 72 bp AGGTCCTTAACCTTAATTGCATCTGCAAAATCTCTTTaGCCCTGTCAGGTAAATAATCACAGGATACAGGGT +
Preference number: 4 (lower is better)
Translates to: RSLTLIASAKSL*PCQVNNHRIQG
Trigger: ACCCTGTATCCTGTGATTATTTACCTGACAGGGCAAAAGAGATTTTGCAGATGCAATTAAGGTTAAGGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
3UTR CAA 72 bp AGGTCCTTAACCTTAATTGCATCTGCAAAATCTCTTTaGCCCTGTCAGGTAAATAATCACAATCTTCCCACG +
Preference number: 4 (lower is better)
Translates to: RSLTLIASAKSL*PCQVNNHNLPT
Trigger: CGTGGGAAGATTGTGATTATTTACCTGACAGGGCAAAAGAGATTTTGCAGATGCAATTAAGGTTAAGGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCTTCTGAATTGTCAATaGGGTAATGTGTGCATCAGT +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWLLNCQ*GNVCIS
Trigger: ACTGATGCACACATTACCTCATTGACAATTCAGAAG...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTATCCTTCAGCTTGCCTTaGTATAGCTCATTTATAAGA +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVSFSLP*YSSFIR
Trigger: TCTTATAAATGAGCTATATCAAGGCAAGCTGAAGGA...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATAAGAGTCCCTCTCATTaGGAGGTGATTCGATGTTTT +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYKSPSH*EVIRCF
Trigger: AAAACATCGAATCACCTCTCAATGAGAGGGACTCTT...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGTCTGGATCAGAAGTCTaGATATGCTGTTCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWSGSEV*ICCSSS
Trigger: AGAACTTGAACAGCATATTCAGACTTCTGATCCAGA...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGAATATCACTGTCCACTaGACTTGTACTCCTGTCATT +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWNITVH*TCTPVI
Trigger: AATGACAGGAGTACAAGTTCAGTGGACAGTGATATT...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTATTGTGTTTACAAGTCTaGCTCTTTTGTGTGATAGCA +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVLCLQV*LFCVIA
Trigger: TGCTATCACACAAAAGAGGCAGACTTGTAAACACAA...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCCTTATCTATCATGATTaGTCTTCCTTACATACACGT +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSLIYHD*SSLHTR
Trigger: ACGTGTATGTAAGGAAGAGCAATCATGATAGATAAG...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATCATTGGAGAAATCGTTaGTCATCTGATCACTGTGAC +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYHWRNR*SSDHCD
Trigger: GTCACAGTGATCAGATGAGCAACGATTTCTCCAATG...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACATAGATCAGCATATATaGATTTGTGGAACTTGCGAA +
Preference number: 4 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYIDQHI*ICGTCE
Trigger: TTCGCAAGTTCCACAAATGCATATATGCTGATCTAT...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGTCCAGCTTTCTGGTATaGTGTCCTTTTGGAATAAGA +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWSSFLV*CPFGIR
Trigger: TCTTATTCCAAAAGGACAGCATACCAGAAAGCTGGA...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCAGTCAGATCTTTATTTaGTGCTCCATCCAGATATAT +
Preference number: 4 (lower is better)
Translates to: VIASQSFKAETPFTNPTSSQIFI*CSIQIY
Trigger: ATATATCTGGATGGAGCACCAAATAAAGATCTGACT...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCCTTTGAAGTTGGTATaGAATACTTGTCACTGGATC +
Preference number: 4 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWPLKLV*NTCHWI
Trigger: GATCCAGTGACAAGTATTCCATACCAACTTCAAAGG...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATTTCTTCTACTACTTGTaGTACTGTGAGAGTCAAGTC +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYFFYYL*YCESQV
Trigger: GACTTGACTCTCACAGTATCACAAGTAGTAGAAGAA...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATTTACTAGCGGCTATGTaGACATTTGTCCGCAATAAA +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYLLAAM*TFVRNK
Trigger: TTTATTGCGGACAAATGTGCACATAGCCGCTAGTAA...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATCGTAGTCCTTCAGCTTaGCTTGATATAGCTCATTTA +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYRSPSA*LDIAHL
Trigger: TAAATGAGCTATATCAAGGCAAGCTGAAGGACTACG...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATGAGCATTGTCTGCATTaGACAAAGTATCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYEHCLH*TKYHCY
Trigger: ATAGCAGTGATACTTTGTGCAATGCAGACAATGCTC...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAAATTCCTCTTTTGATTaGCGTACAGTCATTCCTTTA +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVNSSFD*RTVIPL
Trigger: TAAAGGAATGACTGTACGGCAATCAAAAGAGGAATT...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATGGATTATTTTCTGACTaGGACATGAGTTCATCGCAT +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYGLFSD*DMSSSH
Trigger: ATGCGATGAACTCATGTCCCAGTCAGAAAATAATCC...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATCAACACCATCATCATTaGAGAAATCGTTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYQHHHH*RNRCSS
Trigger: AGATGAGCAACGATTTCTCCAATGATGATGGTGTTG...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTATTTCAGTTCCACTATTaGTTTCAAGACAGATTCCTT +
Preference number: 4 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVFQFHY*FQDRFL
Trigger: AAGGAATCTGTCTTGAAACCAATAGTGGAACTGAAA...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATGGTATGCTGTCCTTTTaGAATAAGATACTGGGGATT +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYGMLSF*NKILGI
Trigger: AATCCCCAGTATCTTATTCCAAAAGGACAGCATACC...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
3UTR CAA 72 bp CTAAATAGTAACACATGCTCCAATGCATGCTTGAGTTaGTGCAGTATTCTTGTTTCTGAAAGTCAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: LNSNTCSNACLS*CSILVSESQVV
Trigger: CACAACTTGACTTTCAGAAACAAGAATACTGCACAAACTCAAGCATGCATTGGAGCATGTGTTACTATTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR TCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATTATCAGAGTCAGTCTTaGGTCAGATCTTTATTTGGT +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYYQSQS*VRSLFG
Trigger: ACCAAATAAAGATCTGACTCAAGACTGACTCTGATA...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR TCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATCTGGTAAATTTAAAGTaGTCCGTTCATTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYLVNLK*SVHSLS
Trigger: AGACAGTGAATGAACGGATCACTTTAAATTTACCAG...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATATCTGTGGTTTCAATTaGTCTCTTTTTGCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYICGFN*SLFAGL
Trigger: CAAACCAGCAAAAAGAGAGCAATTGAAACCACAGAT...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR GCA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATTTATCTTGCATGTATTaGGCTCAATTTCTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYLSCMY*AQFLVV
Trigger: GACAACGAGAAATTGAGCGCAATACATGCAAGATAA...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS GCA 90 bp TCCTCGCCGGGCACCATCGCTGACTCCGGCCGCTCCTCTCCGCCCTaGCGGGGGAGGGTGGAGGGTGGCGGCGGCTCGCTAGCTCAAGAG +
Preference number: 5 (lower is better)
Translates to: SSPGTIADSGRSSPP*RGRVEGGGGSLAQE
Trigger: CTCTTGAGCTAGCGAGCCGCCGCCACCCTCCACCCTCCCCCGGCAGGGCGGAGAGGAGCGGCCGGAGTCAGCGATGGTGCCCGGCGAGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000525257.1
ENST00000527733.7
CDS CCA 90 bp ATCCTCTCCGCCGCCTGCGCTCCAGCAATAGCGGAGGCCTCAGCCTaGGCCTCAGACACCAGCGCGCAGACACCGACCCAGGGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: ILSAACAPAIAEASA*ASDTSAQTPTQGSA
Trigger: GGCGGAGCCCTGGGTCGGTGTCTGCGCGCTGGTGTCTGAGGCCCAGGCTGAGGCCTCCGCTATTGCTGGAGCGCAGGCGGCGGAGAGGAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000525257.1
ENST00000527733.7
CDS GCA 90 bp GACTCCCTCTGCCGGCCGGGGAAGGACCAGGCCCACTGTCCTCCCTaGCTTCTCGGGCTCTTCGGACTCTCTGCCCTGCAGGGAAAGACT +
Preference number: 5 (lower is better)
Translates to: DSLCRPGKDQAHCPP*LLGLFGLSALQGKT
Trigger: AGTCTTTCCCTGCAGGGCAGAGAGTCCGAAGAGCCCGAGAAGGCAGGGAGGACAGTGGGCCTGGTCCTTCCCCGGCCGGCAGAGGGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS GCA 90 bp CTAGCTCAAGAGAGAATGGCAGCGGCAGTCATCCTCTCCGCCGCCTaGGCTCCAGCAATAGCGGAGGCCTCAGCCTGGGCCTCAGACACC +
Preference number: 5 (lower is better)
Translates to: LAQERMAAAVILSAA*APAIAEASAWASDT
Trigger: GGTGTCTGAGGCCCAGGCTGAGGCCTCCGCTATTGCTGGAGCGCAGGCGGCGGAGAGGATGACTGCCGCTGCCATTCTCTCTTGAGCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000525257.1
ENST00000527733.7
CDS GCA 90 bp CTTTTCGTTAGAGGAGAGCTGGACGTTCCATCTCGGGACTCCCTCTaGCGGCCGGGGAAGGACCAGGCCCACTGTCCTCCCTGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: LFVRGELDVPSRDSL*RPGKDQAHCPPCLL
Trigger: GAGAAGGCAGGGAGGACAGTGGGCCTGGTCCTTCCCCGGCCGGCAGAGGGAGTCCCGAGATGGAACGTCCAGCTCTCCTCTAACGAAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS GCA 90 bp CCCACTGTCCTCCCTGCCTTCTCGGGCTCTTCGGACTCTCTGCCCTaGAGGGAAAGACTCGAGCCGAAAGCCCCATCTCTGACCCTAGCA +
Preference number: 5 (lower is better)
Translates to: PTVLPAFSGSSDSLP*RERLEPKAPSLTLA
Trigger: TGCTAGGGTCAGAGATGGGGCTTTCGGCTCGAGTCTTTCCCTGCAGGGCAGAGAGTCCGAAGAGCCCGAGAAGGCAGGGAGGACAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS CCA 90 bp GAATTGGCGAGACAGCCATGCAAACGCTTTTCGTTAGAGGAGAGCTaGACGTTCCATCTCGGGACTCCCTCTGCCGGCCGGGGAAGGACC +
Preference number: 5 (lower is better)
Translates to: ELARQPCKRFSLEES*TFHLGTPSAGRGRT
Trigger: GGTCCTTCCCCGGCCGGCAGAGGGAGTCCCGAGATGGAACGTCCAGCTCTCCTCTAACGAAAAGCGTTTGCATGGCTGTCTCGCCAATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS GCA 90 bp GGCTCTTCCTCAGCCCCGGGAGGTACAGAATTGGCGAGACAGCCATaGAAACGCTTTTCGTTAGAGGAGAGCTGGACGTTCCATCTCGGG +
Preference number: 5 (lower is better)
Translates to: GSSSAPGGTELARQP*KRFSLEESWTFHLG
Trigger: CCCGAGATGGAACGTCCAGCTCTCCTCTAACGAAAAGCGTTTGCATGGCTGTCTCGCCAATTCTGTACCTCCCGGGGCTGAGGAAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS-3UTR CAA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTCCACTTCCCCTGCCTTaGAGTATGGTGCTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAPLPLP*SMVLRK
Trigger: CTTCCTGAGCACCATACTCAAAGGCAGGGGAAGTGG...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTGAGCAGGGTCACAATTaGTTGCATGTGACCTGCCTC +
Preference number: 5 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAEQGHN*LHVTCL
Trigger: GAGGCAGGTCACATGCAACAAATTGTGACCCTGCTC...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTCTCTTTCGGGACCAGTaGGTTCTCCTCGCCGGGCAC +
Preference number: 5 (lower is better)
Translates to: RPVQISYTRHGPETTAFVLFRDQ*VLLAGH
Trigger: GTGCCCGGCGAGGAGAACCAACTGGTCCCGAAAGAG...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTCAAAACAGTGGCCCATaGGGCACTGAGCTTCTGATT +
Preference number: 5 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAQNSGP*GTELLI
Trigger: AATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTG...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCGAGCAGGGTCACAATTaGTTGCATGTGACCTGCCTC +
Preference number: 5 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTEQGHN*LHVTCL
Trigger: GAGGCAGGTCACATGCAACAAATTGTGACCCTGCTC...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCACAGGGTGTGCATGGTaGACACAAGTTCATCTGCCC +
Preference number: 5 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTTGCAW*TQVHLP
Trigger: GGGCAGATGAACTTGTGTCAACCATGCACACCCTGT...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTCTCTCTCCTGCTCTCTaGGCCTCTAGATGTATCACA +
Preference number: 5 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIALSPAL*ASRCIT
Trigger: TGTGATACATCTAGAGGCCAAGAGAGCAGGAGAGAG...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCCACACTAGCAAATGCTaGGCTGGACCCATAAGGTCG +
Preference number: 5 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTHTSKC*AGPIRS
Trigger: CGACCTTATGGGTCCAGCCAAGCATTTGCTAGTGTG...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCTTTCGGGACCAGTaGGTTCTCCTCGCCGGGCAC +
Preference number: 5 (lower is better)
Translates to: ETSLTRATTILWDLALRNLFRDQ*VLLAGH
Trigger: GTGCCCGGCGAGGAGAACCAACTGGTCCCGAAAGAG...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGCAAAACAGTGGCCCATaGGGCACTGAGCTTCTGATT +
Preference number: 5 (lower is better)
Translates to: PGSGNLIHIARALPVRLWQNSGP*GTELLI
Trigger: AATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTG...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTCTGAAACCACAGCTTTaGTTTCTTTGGCCAGAATGC +
Preference number: 5 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIALKPQL*FLWPEC
Trigger: GCATTCTGGCCAAAGAAACAAAAGCTGTGGTTTCAG...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTCTTCCTACAGGTCCTTaGACTCTTTCACAGTCATCA +
Preference number: 5 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIALPTGP*TLSQSS
Trigger: TGATGACTGTGAAAGAGTCAAAGGACCTGTAGGAAG...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTGCATCTAGCAGAAACTaGCATGGCTCTTGTTCATTG +
Preference number: 5 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAASSRN*HGSCSL
Trigger: CAATGAACAAGAGCCATGCAAGTTTCTGCTAGATGC...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTTTTGAGTCCTTGACATaGAGGAGGAAACCAATCCTG +
Preference number: 5 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAFESLT*RRKPIL
Trigger: CAGGATTGGTTTCCTCCTCAATGTCAAGGACTCAAA...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGACAGGGTGTGCATGGTaGACACAAGTTCATCTGCCC +
Preference number: 5 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQTGCAW*TQVHLP
Trigger: GGGCAGATGAACTTGTGTCAACCATGCACACCCTGT...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTGCGCTCAATTTCTCGTaGTCTCTTTTCTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAALNFS*SLFLFF
Trigger: GAAGAACAAGAAAAGAGACAACGAGAAATTGAGCGC...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTAACATATATGTTGACTaGACGCCACCTAGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIANIYVD*TPPSRS
Trigger: GCTTCTACTAGGTGGCGTCAAGTCAACATATATGTT...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCCTTGTCTCAGTACTTTaGCTGCTGTCCCCATTATCT +
Preference number: 5 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTLVSVL*LLSPLS
Trigger: AGATAATGGGGACAGCAGCAAAAGTACTGAGACAAG...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGGATTGCACTGAGCACTaGATAAGCCCACTGCCCAGT +
Preference number: 5 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQDCTEH*ISPLPS
Trigger: ACTGGGCAGTGGGCTTATCAAGTGCTCAGTGCAATC...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTGAGTCAGATCTTTATTaGGTGCTCCATCCAGATATA +
Preference number: 5 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAESDLY*VLHPDI
Trigger: TATATCTGGATGGAGCACCAAATAAAGATCTGACTC...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCTCTTTCGGGACCAGTaGGTTCTCCTCGCCGGGCAC +
Preference number: 5 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYLFRDQ*VLLAGH
Trigger: GTGCCCGGCGAGGAGAACCAACTGGTCCCGAAAGAG...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp AGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCATCCTCCAGCAGTATTaGAGGTTGTTCACCATCTTT +
Preference number: 5 (lower is better)
Translates to: SWCRSWQGQHILEALWRFILQQY*RLFTIF
Trigger: AAAGATGGTGAACAACCTCAAATACTGCTGGAGGAT...GAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTGCCAACTCCTGCACCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCTCAACACCATCATCATaGGAGAAATCGTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTSTPSS*EKSLLI
Trigger: GATGAGCAACGATTTCTCCAATGATGATGGTGTTGA...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp AGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCTCAACACCATCATCATaGGAGAAATCGTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: SWCRSWQGQHILEALWRFSTPSS*EKSLLI
Trigger: GATGAGCAACGATTTCTCCAATGATGATGGTGTTGA...GAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTGCCAACTCCTGCACCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCTCAGCATATATGCATTaGTGGAACTTGCGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTSAYMH*WNLRKH
Trigger: GTGCTTTCGCAAGTTCCACAAATGCATATATGCTGA...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTTGCAGTGACAAGCTTTaGAGTTTTTCAGTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIACSDKL*SFSVLS
Trigger: AGAAAGCACTGAAAAACTCAAAAGCTTGTCACTGCA...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGGCATCTAGCAGAAACTaGCATGGCTCTTGTTCATTG +
Preference number: 5 (lower is better)
Translates to: PGSGNLIHIARALPVRLWASSRN*HGSCSL
Trigger: CAATGAACAAGAGCCATGCAAGTTTCTGCTAGATGC...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp AGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCTTAGATTTTATTCCCTaGGCTGAAACTTCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: SWCRSWQGQHILEALWRFLDFIP*AETSEG
Trigger: CCCCTCAGAAGTTTCAGCCAAGGGAATAAAATCTAA...GAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTGCCAACTCCTGCACCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS CCA 90 bp GCTTTGGCTGACATAATCACTGGTAGAACCCCCAGAACCTTCTCTTaGAAGCGGACCTATAAACCTGTCATGAACACTGTCTTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: ALADIITGRTPRTFS*KRTYKPVMNTVFPS
Trigger: GCTGGGGAAGACAGTGTTCATGACAGGTTTATAGGTCCGCTTCCAAGAGAAGGTTCTGGGGGTTCTACCAGTGATTATGTCAGCCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTCATCAGTTCATTTCTTaGCTCATCTGTCAATTCCAT +
Preference number: 5 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAHQFIS*LICQFH
Trigger: ATGGAATTGACAGATGAGCAAAGAAATGAACTGATG...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGCGGCTATGTGCACATTaGTCCGCAATAAAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: PGSGNLIHIARALPVRLWRLCAH*SAIKEV
Trigger: AACTTCTTTTATTGCGGACAAATGTGCACATAGCCG...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACACAGGGTGTGCATGGTaGACACAAGTTCATCTGCCC +
Preference number: 5 (lower is better)
Translates to: ETSLTRATTILWDLALRNTGCAW*TQVHLP
Trigger: GGGCAGATGAACTTGTGTCAACCATGCACACCCTGT...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACGGAGGTGGCCGGCACTaGTCGCTAGCTTCTAGTCAC +
Preference number: 5 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYGGGRH*SLASSH
Trigger: GTGACTAGAAGCTAGCGACAAGTGCCGGCCACCTCC...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS-3UTR CAA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGATCCTCCAGCAGTATTaGAGGTTGTTCACCATCTTT +
Preference number: 5 (lower is better)
Translates to: PGSGNLIHIARALPVRLWILQQY*RLFTIF
Trigger: AAAGATGGTGAACAACCTCAAATACTGCTGGAGGAT...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCCATCTGTGGTTTCAATaGCTCTCTTTTTGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTHLWFQ*LSFCWF
Trigger: AAACCAGCAAAAAGAGAGCAATTGAAACCACAGATG...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCTTTCTTAATGTCCTCTaGTGTTATCCTGCTGACATG +
Preference number: 5 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTFLNVL*CYPADM
Trigger: CATGTCAGCAGGATAACACAAGAGGACATTAAGAAA...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGGCGCTCAATTTCTCGTaGTCTCTTTTCTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: PGSGNLIHIARALPVRLWALNFS*SLFLFF
Trigger: GAAGAACAAGAAAAGAGACAACGAGAAATTGAGCGC...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp AGAGATCATGAGGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTGAATTAATTCCTCTTTaGATTGCCGTACAGTCATTC +
Preference number: 5 (lower is better)
Translates to: RDHEAPPPPGSGNLIHIAELIPL*IAVQSF
Trigger: GAATGACTGTACGGCAATCAAAAGAGGAATTAATTC...AGCGATGTGGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCCTCATGATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCTCATGGAAGATCAAATaGAGGGTTGAAGACTTGGTA +
Preference number: 5 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTSWKIK*RVEDLV
Trigger: TACCAAGTCTTCAACCCTCAATTTGATCTTCCATGA...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCTCAGGAAGCGACATTaGGCTCTGGGGCAGCCATCT +
Preference number: 5 (lower is better)
Translates to: QFVACDLPQPQKIRDHEALRKRH*ALGQPS
Trigger: AGATGGCTGCCCCAGAGCCAAATGTCGCTTCCTGAG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS CCA 90 bp TTCTCTCGCAATTCGTCCACACTACTGCTTTCCAATACAACCTCCTaGAAGGGATCCAACTTCATCTCTGAAGGCTTCCACCGTCTTGAC +
Preference number: 5 (lower is better)
Translates to: FSRNSSTLLLSNTTS*KGSNFISEGFHRLD
Trigger: GTCAAGACGGTGGAAGCCTTCAGAGATGAAGTTGGATCCCTTCCAGGAGGTTGTATTGGAAAGCAGTAGTGTGGACGAATTGCGAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305481.10
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
ENST00000529813.1
CDS-3UTR CAA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACAAGGCTTCCACCGTCTaGACAAAACTGCAAGCTGTG +
Preference number: 5 (lower is better)
Translates to: ETSLTRATTILWDLALRNKASTV*TKLQAV
Trigger: CACAGCTTGCAGTTTTGTCAAGACGGTGGAAGCCTT...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp AGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCATGGCAGAGCCACATTaGCTAACAGTATTTTCTAAT +
Preference number: 5 (lower is better)
Translates to: SWCRSWQGQHILEALWRFMAEPH*LTVFSN
Trigger: ATTAGAAAATACTGTTAGCAAATGTGGCTCTGCCAT...GAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTGCCAACTCCTGCACCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTTGGACAGCGTTTTATTaGCTCCCGTTCACTCTCCTG +
Preference number: 5 (lower is better)
Translates to: ATTILWDLALRNLTEDYIWTAFY*LPFTLL
Trigger: CAGGAGAGTGAACGGGAGCAAATAAAACGCTGTCCA...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS-3UTR CAA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGCAGCAGTATTTGAGGTaGTTCACCATCTTTATCTGT +
Preference number: 5 (lower is better)
Translates to: PGSGNLIHIARALPVRLWQQYLR*FTIFIC
Trigger: ACAGATAAAGATGGTGAACAACCTCAAATACTGCTG...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTCTTCCTACAGGTCCTTaGACTCTTTCACAGTCATCA +
Preference number: 5 (lower is better)
Translates to: RPVQISYTRHGPETTAFVLPTGP*TLSQSS
Trigger: TGATGACTGTGAAAGAGTCAAAGGACCTGTAGGAAG...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGTGCAGTGACAAGCTTTaGAGTTTTTCAGTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: PGSGNLIHIARALPVRLWCSDKL*SFSVLS
Trigger: AGAAAGCACTGAAAAACTCAAAAGCTTGTCACTGCA...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTGACGCTCTCAAACTCTaGATTGCTGGCATACACTCG +
Preference number: 5 (lower is better)
Translates to: ATTILWDLALRNLTEDYIDALKL*IAGIHS
Trigger: CGAGTGTATGCCAGCAATCAAGAGTTTGAGAGCGTC...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp TCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTGACGCTCTCAAACTCTaGATTGCTGGCATACACTCG +
Preference number: 5 (lower is better)
Translates to: SWAPSSSNPAMTVLSFSGDALKL*IAGIHS
Trigger: CGAGTGTATGCCAGCAATCAAGAGTTTGAGAGCGTC...ACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp CAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCAGGAAAACCTCCCAGTaGCTGGAAATATTAATATCT +
Preference number: 5 (lower is better)
Translates to: QCWCHWVTPTMSGQNGTTRKTSQ*LEILIS
Trigger: AGATATTAATATTTCCAGCAACTGGGAGGTTTTCCT...GGTAGTGCCATTTTGGCCGGACATGGTTGGGGTAACCCAGTGACACCAGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGAGAGGGAAGGGGAGCTaGGTGCCCACCTGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWRGKGS*VPTCEA
Trigger: TGCCTCACAGGTGGGCACCAAGCTCCCCTTCCCTCT...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTAGGTTCAGGGGAGCTTaGAATGAAACCACTGAACTT +
Preference number: 5 (lower is better)
Translates to: RPVQISYTRHGPETTAFVRFRGA*NETTEL
Trigger: AAGTTCAGTGGTTTCATTCAAAGCTCCCCTGAACCT...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTATGGTGCTTGAATACCTaGCTGCTGCTCTCTCCCAAA +
Preference number: 5 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVWCLNT*LLLSPK
Trigger: TTTGGGAGAGAGCAGCAGCAAGGTATTCAAGCACCA...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTAGGGTGGAGGTGGTGCTaGAATACCTTGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILGWRWC*NTLLLL
Trigger: GAGCAGCAGCAAGGTATTCAAGCACCACCTCCACCC...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS TCA 90 bp ATGCAGAAAGTTCTTCTTTCCTGGCTCAAAATTAGCGTCGAGAAGTaGCTTGTCACTGGTATGATCCAGTGGTGCCTCTTTCGGGACCAG +
Preference number: 5 (lower is better)
Translates to: MQKVLLSWLKISVEK*LVTGMIQWCLFRDQ
Trigger: CTGGTCCCGAAAGAGGCACCACTGGATCATACCAGTGACAAGTCACTTCTCGACGCTAATTTTGAGCCAGGAAAGAAGAACTTTCTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS TCA 90 bp GAAGGCAGAGACTGGGGTGATGTATCTACAAGCCAAGGTTGCCAATaGTGGCCAAAAACCACAGAAGCTAGGAGAGAGTATGGAACAGAT +
Preference number: 5 (lower is better)
Translates to: EGRDWGDVSTSQGCQ*WPKTTEARREYGTD
Trigger: ATCTGTTCCATACTCTCTCCTAGCTTCTGTGGTTTTTGGCCATCATTGGCAACCTTGGCTTGTAGATACATCACCCCAGTCTCTGCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS CCA 90 bp CACACTAGCAAATGCTTGGCTGGACCCATAAGGTCGGATGACCAATaGAATATCAAGATATGTGTCGATTCGCCAGCCCTCATAACCACA +
Preference number: 5 (lower is better)
Translates to: HTSKCLAGPIRSDDQ*NIKICVDSPALITT
Trigger: TGTGGTTATGAGGGCTGGCGAATCGACACATATCTTGATATTCCATTGGTCATCCGACCTTATGGGTCCAGCCAAGCATTTGCTAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGCATCAGTTCATTTCTTaGCTCATCTGTCAATTCCAT +
Preference number: 5 (lower is better)
Translates to: PGSGNLIHIARALPVRLWHQFIS*LICQFH
Trigger: ATGGAATTGACAGATGAGCAAAGAAATGAACTGATG...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGAAGAGTCAACACACGTaGGATTTACTTCTGAATTGT +
Preference number: 5 (lower is better)
Translates to: PGSGNLIHIARALPVRLWKSQHT*DLLLNC
Trigger: ACAATTCAGAAGTAAATCCAACGTGTGTTGACTCTT...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCGGGCTCAGGAAACTaGATCCACATCGCTAGGGCT +
Preference number: 5 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVPGSGN*IHIARA
Trigger: AGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACAGCTCTTCAAAACCTTaGCATGACTTGTGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: ETSLTRATTILWDLALRNSSSKP*HDLWGA
Trigger: TGCTCCCCACAAGTCATGCAAAGGTTTTGAAGAGCT...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAAGCTCTTCAAAACCTTaGCATGACTTGTGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVSSSKP*HDLWGA
Trigger: TGCTCCCCACAAGTCATGCAAAGGTTTTGAAGAGCT...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTACAGCTTTTGTTTCTTaGGCCAGAATGCACCCCTCA +
Preference number: 5 (lower is better)
Translates to: ATTILWDLALRNLTEDYITAFVS*ARMHPS
Trigger: TGAGGGGTGCATTCTGGCCAAAGAAACAAAAGCTGT...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGTTTATCTTGCATGTATaGCGCTCAATTTCTCGTTGT +
Preference number: 5 (lower is better)
Translates to: PGSGNLIHIARALPVRLWFILHV*RSISRC
Trigger: ACAACGAGAAATTGAGCGCAATACATGCAAGATAAA...CCATAACCTAACAGGCAGAGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTAACATATATGTTGACTaGACGCCACCTAGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: RPVQISYTRHGPETTAFVNIYVD*TPPSRS
Trigger: GCTTCTACTAGGTGGCGTCAAGTCAACATATATGTT...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTCCAGCACTATTCTCATaGTTTCAGCAGGTAAATGGA +
Preference number: 5 (lower is better)
Translates to: RPVQISYTRHGPETTAFVPALFS*FQQVNG
Trigger: TCCATTTACCTGCTGAAACAATGAGAATAGTGCTGG...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGTGCTCCAATGCATGCTaGAGTTTGTGCAGTATTCTT +
Preference number: 5 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQCSNAC*SLCSIL
Trigger: AAGAATACTGCACAAACTCAAGCATGCATTGGAGCA...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTAAGGCTTCCACCGTCTaGACAAAACTGCAAGCTGTG +
Preference number: 5 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAKASTV*TKLQAV
Trigger: CACAGCTTGCAGTTTTGTCAAGACGGTGGAAGCCTT...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCCGGGCTCAGGAAACTaGATCCACATCGCTAGGGCT +
Preference number: 5 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWPGSGN*IHIARA
Trigger: AGCCCTAGCGATGTGGATCAAGTTTCCTGAGCCCGG...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTAAACCTTTGCATGACTaGTGGGGAGCAGGGTCACAA +
Preference number: 5 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAKPLHD*WGAGSQ
Trigger: TTGTGACCCTGCTCCCCACAAGTCATGCAAAGGTTT...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCTGAAACCACAGCTTTaGTTTCTTTGGCCAGAATGC +
Preference number: 5 (lower is better)
Translates to: ATTILWDLALRNLTEDYILKPQL*FLWPEC
Trigger: GCATTCTGGCCAAAGAAACAAAAGCTGTGGTTTCAG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCTCTCTCCTGCTCTCTaGGCCTCTAGATGTATCACA +
Preference number: 5 (lower is better)
Translates to: QFVACDLPQPQKIRDHEALSPAL*ASRCIT
Trigger: TGTGATACATCTAGAGGCCAAGAGAGCAGGAGAGAG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGCAGCAGTATTTGAGGTaGTTCACCATCTTTATCTGT +
Preference number: 5 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQQQYLR*FTIFIC
Trigger: ACAGATAAAGATGGTGAACAACCTCAAATACTGCTG...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTCATCTGTGGTTTCAATaGCTCTCTTTTTGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: RPVQISYTRHGPETTAFVHLWFQ*LSFCWF
Trigger: AAACCAGCAAAAAGAGAGCAATTGAAACCACAGATG...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTCACACTAGCAAATGCTaGGCTGGACCCATAAGGTCG +
Preference number: 5 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSHTSKC*AGPIRS
Trigger: CGACCTTATGGGTCCAGCCAAGCATTTGCTAGTGTG...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCCACACTAGCAAATGCTaGGCTGGACCCATAAGGTCG +
Preference number: 5 (lower is better)
Translates to: VIASQSFKAETPFTNPTSHTSKC*AGPIRS
Trigger: CGACCTTATGGGTCCAGCCAAGCATTTGCTAGTGTG...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTACTAGTAGAAGCCCCATaGGTGTATCTTCTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVLVEAP*VYLLLL
Trigger: AAGGAGAAGAAGATACACCAATGGGGCTTCTACTAG...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCTTGTCTCAGTACTTTaGCTGCTGTCCCCATTATCT +
Preference number: 5 (lower is better)
Translates to: ATTILWDLALRNLTEDYILVSVL*LLSPLS
Trigger: AGATAATGGGGACAGCAGCAAAAGTACTGAGACAAG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACGAAGAGTCCCTCTCATaGAGAGGTGATTCGATGTTT +
Preference number: 5 (lower is better)
Translates to: ETSLTRATTILWDLALRNEESLS*RGDSMF
Trigger: AAACATCGAATCACCTCTCAATGAGAGGGACTCTTC...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTGGCTCTAAATGTTGTTaGAAAGCTGCCAGAGTAATT +
Preference number: 5 (lower is better)
Translates to: RPVQISYTRHGPETTAFVGSKCC*KAARVI
Trigger: AATTACTCTGGCAGCTTTCAAACAACATTTAGAGCC...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGGGTCACTGGCATTCCTaGGCTCATGGGCCCCTTCAT +
Preference number: 5 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWGHWHS*AHGPLH
Trigger: ATGAAGGGGCCCATGAGCCAAGGAATGCCAGTGACC...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS TCA 90 bp CAGGCTTTCTCGTCTCCAACAGCAGATCAAACATATATGTTGACTTaGCGCCACCTAGTAGAAGCCCCATTGGTGTATCTTCTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: QAFSSPTADQTYMLT*RHLVEAPLVYLLLL
Trigger: AAGGAGAAGAAGATACACCAATGGGGCTTCTACTAGGTGGCGTCAAGTCAACATATATGTTTGATCTGCTGTTGGAGACGAGAAAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS GCA 90 bp TCCCTACGACCCCAGATACTCAAAGAAATCACAATCTGGAGCACTTaGCTACACACCATAGTAGATGGTATCCTAGTTGTTCCTTACCTC +
Preference number: 5 (lower is better)
Translates to: SLRPQILKEITIWST*LHTIVDGILVVPYL
Trigger: GAGGTAAGGAACAACTAGGATACCATCTACTATGGTGTGTAGGCAAGTGCTCCAGATTGTGATTTCTTTGAGTATCTGGGGTCGTAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS-3UTR CAA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACAAGGCTTCCACCGTCTaGACAAAACTGCAAGCTGTG +
Preference number: 5 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYKASTV*TKLQAV
Trigger: CACAGCTTGCAGTTTTGTCAAGACGGTGGAAGCCTT...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp TCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGCACTTTACAGTACATTaGACTATAGTGCACAACATG +
Preference number: 5 (lower is better)
Translates to: SCNDSSVLLRCQLSGFLQHFTVH*TIVHNM
Trigger: CATGTTGTGCACTATAGTCAAATGTACTGTAAAGTG...CTGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACTGCAATGAAATCATGTaGACTGCATCAGTCTGTACC +
Preference number: 5 (lower is better)
Translates to: ETSLTRATTILWDLALRNCNEIM*TASVCT
Trigger: GGTACAGACTGATGCAGTCAACATGATTTCATTGCA...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCAAACCTTTGCATGACTaGTGGGGAGCAGGGTCACAA +
Preference number: 5 (lower is better)
Translates to: VIASQSFKAETPFTNPTSKPLHD*WGAGSQ
Trigger: TTGTGACCCTGCTCCCCACAAGTCATGCAAAGGTTT...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTAAACCTTTGCATGACTaGTGGGGAGCAGGGTCACAA +
Preference number: 5 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSKPLHD*WGAGSQ
Trigger: TTGTGACCCTGCTCCCCACAAGTCATGCAAAGGTTT...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTACAGCTTTTGTTTCTTaGGCCAGAATGCACCCCTCA +
Preference number: 5 (lower is better)
Translates to: QFVACDLPQPQKIRDHEATAFVS*ARMHPS
Trigger: TGAGGGGTGCATTCTGGCCAAAGAAACAAAAGCTGT...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCCGGGAGGTACAGAATaGGCGAGACAGCCATGCAAA +
Preference number: 5 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWPGGTE*ARQPCK
Trigger: TTTGCATGGCTGTCTCGCCAATTCTGTACCTCCCGG...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS-3UTR CAA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGTTGGTATGGAATACTaGTCACTGGATCTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVVGMEY*SLDLLQ
Trigger: CTGAAGAAGATCCAGTGACAAGTATTCCATACCAAC...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTATCAGCATATATGCATTaGTGGAACTTGCGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVSAYMH*WNLRKH
Trigger: GTGCTTTCGCAAGTTCCACAAATGCATATATGCTGA...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACTCAGCATATATGCATTaGTGGAACTTGCGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: ETSLTRATTILWDLALRNSAYMH*WNLRKH
Trigger: GTGCTTTCGCAAGTTCCACAAATGCATATATGCTGA...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCCACTTCTAGAAATTTaGCATTTCTGGCTGGATCCT +
Preference number: 5 (lower is better)
Translates to: ATTILWDLALRNLTEDYIPLLEI*HFWLDP
Trigger: AGGATCCAGCCAGAAATGCAAAATTTCTAGAAGTGG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACAACATATATGTTGACTaGACGCCACCTAGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: ETSLTRATTILWDLALRNNIYVD*TPPSRS
Trigger: GCTTCTACTAGGTGGCGTCAAGTCAACATATATGTT...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTACCAGCACTATTCTCATaGTTTCAGCAGGTAAATGGA +
Preference number: 5 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVPALFS*FQQVNG
Trigger: TCCATTTACCTGCTGAAACAATGAGAATAGTGCTGG...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACAAACTTGCATGGCTCTaGTTCATTGACCAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: ETSLTRATTILWDLALRNKLAWL*FIDQKL
Trigger: CAGCTTTTGGTCAATGAACAAGAGCCATGCAAGTTT...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTGTTAGGAAAACCTCCCAGTaGCTGGAAATATTAATATCT +
Preference number: 5 (lower is better)
Translates to: RPVQISYTRHGPETTAFVRKTSQ*LEILIS
Trigger: AGATATTAATATTTCCAGCAACTGGGAGGTTTTCCT...AACAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTGATCTGTACGGGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS CCA 90 bp TCTCTGAAGGCTTCCACCGTCTTGACAAAACTGCAAGCTGTGACATaGACTTCATCTTCTCTACCCCTAAGAATATGCAAGATTAGGTCA +
Preference number: 5 (lower is better)
Translates to: SLKASTVLTKLQAVT*TSSSLPLRICKIRS
Trigger: TGACCTAATCTTGCATATTCTTAGGGGTAGAGAAGATGAAGTCCATGTCACAGCTTGCAGTTTTGTCAAGACGGTGGAAGCCTTCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS-3UTR CAA 90 bp TCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTTCAAATAGCAAGTCATaGCTTGGTTTACTAGTCCCA +
Preference number: 5 (lower is better)
Translates to: SWAPSSSNPAMTVLSFSGSNSKS*LGLLVP
Trigger: TGGGACTAGTAAACCAAGCAATGACTTGCTATTTGA...ACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCTTCCTACAGGTCCTTaGACTCTTTCACAGTCATCA +
Preference number: 5 (lower is better)
Translates to: QFVACDLPQPQKIRDHEALPTGP*TLSQSS
Trigger: TGATGACTGTGAAAGAGTCAAAGGACCTGTAGGAAG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCTTGTCTCAGTACTTTaGCTGCTGTCCCCATTATCT +
Preference number: 5 (lower is better)
Translates to: QFVACDLPQPQKIRDHEALVSVL*LLSPLS
Trigger: AGATAATGGGGACAGCAGCAAAAGTACTGAGACAAG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAGACGCTCTCAAACTCTaGATTGCTGGCATACACTCG +
Preference number: 5 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVDALKL*IAGIHS
Trigger: CGAGTGTATGCCAGCAATCAAGAGTTTGAGAGCGTC...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCACATACACAGAGTTTaGCCTTTCAGGACATATGGC +
Preference number: 5 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAHIHRV*PFRTYG
Trigger: GCCATATGTCCTGAAAGGCAAAACTCTGTGTATGTG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATCTCCCTGACACTCCGTaGAGGGAGGAGAGGTTAGAT +
Preference number: 5 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYLPDTP*REERLD
Trigger: ATCTAACCTCTCCTCCCTCAACGGAGTGTCAGGGAG...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTGGGAGATTGTGGTGTTaGGAAAACAGATTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSGRLWC*ENRFFP
Trigger: GGGGAAGAATCTGTTTTCCAAACACCACAATCTCCC...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS TCA 90 bp ATGCAGAAAGTTCTTCTTTCCTGGCTCAAAATTAGCGTCGAGAAGTaGCTTGTCACTGGTATGATCCAGTGGTGCCATATCAGCAGTATT +
Preference number: 5 (lower is better)
Translates to: MQKVLLSWLKISVEK*LVTGMIQWCHISSI
Trigger: AATACTGCTGATATGGCACCACTGGATCATACCAGTGACAAGTCACTTCTCGACGCTAATTTTGAGCCAGGAAAGAAGAACTTTCTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399455.2
ENST00000525367.1
ENST00000527733.7
CDS GCA 90 bp GAAATCGTTGCTCATCTGATCACTGTGACAACTACCTTCATTTTCTaGTCCACTGTCAGTGCAACTTTCAGTCTGAGGAGATTTCTCATC +
Preference number: 5 (lower is better)
Translates to: EIVAHLITVTTTFIF*STVSATFSLRRFLI
Trigger: GATGAGAAATCTCCTCAGACTGAAAGTTGCACTGACAGTGGAGCAGAAAATGAAGGTAGTTGTCACAGTGATCAGATGAGCAACGATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS GCA 90 bp ACTGTGAGAGTCAAGTCCATTAGCCAAAGGGATCTGAGCATTGTCTaGATTGCACAAAGTATCACTGCTATGACTGGAGCTAAGAATATC +
Preference number: 5 (lower is better)
Translates to: TVRVKSISQRDLSIV*IAQSITAMTGAKNI
Trigger: GATATTCTTAGCTCCAGTCATAGCAGTGATACTTTGTGCAATGCAGACAATGCTCAGATCCCTTTGGCTAATGGACTTGACTCTCACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000525078.1
ENST00000527733.7
CDS-3UTR CAA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACCACTTTACAGTACATTaGACTATAGTGCACAACATG +
Preference number: 5 (lower is better)
Translates to: ETSLTRATTILWDLALRNHFTVH*TIVHNM
Trigger: CATGTTGTGCACTATAGTCAAATGTACTGTAAAGTG...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTACACTTTACAGTACATTaGACTATAGTGCACAACATG +
Preference number: 5 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVHFTVH*TIVHNM
Trigger: CATGTTGTGCACTATAGTCAAATGTACTGTAAAGTG...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACATGGCAGAGCCACATTaGCTAACAGTATTTTCTAAT +
Preference number: 5 (lower is better)
Translates to: ETSLTRATTILWDLALRNMAEPH*LTVFSN
Trigger: ATTAGAAAATACTGTTAGCAAATGTGGCTCTGCCAT...GTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTGTTAATGAGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATGAGCAGGGTCACAATTaGTTGCATGTGACCTGCCTC +
Preference number: 5 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYEQGHN*LHVTCL
Trigger: GAGGCAGGTCACATGCAACAAATTGTGACCCTGCTC...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTCTGAAACCACAGCTTTaGTTTCTTTGGCCAGAATGC +
Preference number: 5 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSLKPQL*FLWPEC
Trigger: GCATTCTGGCCAAAGAAACAAAAGCTGTGGTTTCAG...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCCAATGCTTATTTCATaGGATTATTTTCTGACTGGG +
Preference number: 5 (lower is better)
Translates to: ATTILWDLALRNLTEDYIPMLIS*DYFLTG
Trigger: CCCAGTCAGAAAATAATCCAATGAAATAAGCATTGG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTATTTCAAGTCCAGATTTaGAGATCTTTTCAGTTCCAC +
Preference number: 5 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVFQVQI*RSFQFH
Trigger: GTGGAACTGAAAAGATCTCAAAATCTGGACTTGAAA...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CAATTTGTTGCATGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCATGAGGCTCCACTTCTAGAAATTTaGCATTTCTGGCTGGATCCT +
Preference number: 5 (lower is better)
Translates to: QFVACDLPQPQKIRDHEAPLLEI*HFWLDP
Trigger: AGGATCCAGCCAGAAATGCAAAATTTCTAGAAGTGG...AGCCTCATGATCTCTTATCTTTTGAGGCTGAGGCAGGTCACATGCAACAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCGCATCTAGCAGAAACTaGCATGGCTCTTGTTCATTG +
Preference number: 5 (lower is better)
Translates to: VIASQSFKAETPFTNPTSASSRN*HGSCSL
Trigger: CAATGAACAAGAGCCATGCAAGTTTCTGCTAGATGC...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp ATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAAATGCATGCTTGAGTTaGTGCAGTATTCTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: MIPSQNSGPLGTELLIGVNACLS*CSILVS
Trigger: AGAAACAAGAATACTGCACAAACTCAAGCATGCATT...TACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGGCAGCAGCAGCACAATaGCCCTGTATAAAGATGACC +
Preference number: 5 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWAAAAQ*PCIKMT
Trigger: GGTCATCTTTATACAGGGCAATTGTGCTGCTGCTGC...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp GCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTCCACCGATATTATTATaGATAAAGCTGGTGTTAGCT +
Preference number: 5 (lower is better)
Translates to: ATTILWDLALRNLTEDYIPPILL*IKLVLA
Trigger: AGCTAACACCAGCTTTATCAATAATAATATCGGTGG...AATGTAATCCTCAGTGAGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp TCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTTCTGCAAAATCTCTTTaGCCCTGTCAGGTAAATAAT +
Preference number: 5 (lower is better)
Translates to: SWAPSSSNPAMTVLSFSGSAKSL*PCQVNN
Trigger: ATTATTTACCTGACAGGGCAAAAGAGATTTTGCAGA...ACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATGAAGGGGCCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS TCA 90 bp CAATACTTTAAATGTGCCAATGTTGATAACGAAAACTGGGAGGTGTaGCAAGTATGTCTGCTACTTGGACCTCCTCAAGGTCACTGCTAT +
Preference number: 5 (lower is better)
Translates to: QYFKCANVDNENWEV*QVCLLLGPPQGHCY
Trigger: ATAGCAGTGACCTTGAGGAGGTCCAAGTAGCAGACATACTTGTCACACCTCCCAGTTTTCGTTATCAACATTGGCACATTTAAAGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS GCA 90 bp CAAGACAGATTCCTTCATCAACACCATCATCATTGGAGAAATCGTTaGTCATCTGATCACTGTGACAACTACCTTCATTTTCTGCTCCAC +
Preference number: 5 (lower is better)
Translates to: QDRFLHQHHHHWRNR*SSDHCDNYLHFLLH
Trigger: GTGGAGCAGAAAATGAAGGTAGTTGTCACAGTGATCAGATGAGCAACGATTTCTCCAATGATGATGGTGTTGATGAAGGAATCTGTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS CCA 90 bp AGTGATTATTCCCTACGACCCCAGATACTCAAAGAAATCACAATCTaGAGCACTTGCCTACACACCATAGTAGATGGTATCCTAGTTGTT +
Preference number: 5 (lower is better)
Translates to: SDYSLRPQILKEITI*STCLHTIVDGILVV
Trigger: AACAACTAGGATACCATCTACTATGGTGTGTAGGCAAGTGCTCCAGATTGTGATTTCTTTGAGTATCTGGGGTCGTAGGGAATAATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS-3UTR CAA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATCAAAACAGTGGCCCATaGGGCACTGAGCTTCTGATT +
Preference number: 5 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYQNSGP*GTELLI
Trigger: AATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTG...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTCGGCTATGTGCACATTaGTCCGCAATAAAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSRLCAH*SAIKEV
Trigger: AACTTCTTTTATTGCGGACAAATGTGCACATAGCCG...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGAGCTCTTCAAAACCTTaGCATGACTTGTGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWSSSKP*HDLWGA
Trigger: TGCTCCCCACAAGTCATGCAAAGGTTTTGAAGAGCT...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATCTCTCTCCTGCTCTCTaGGCCTCTAGATGTATCACA +
Preference number: 5 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYLSPAL*ASRCIT
Trigger: TGTGATACATCTAGAGGCCAAGAGAGCAGGAGAGAG...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACATCCTCCAGCAGTATTaGAGGTTGTTCACCATCTTT +
Preference number: 5 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYILQQY*RLFTIF
Trigger: AAAGATGGTGAACAACCTCAAATACTGCTGGAGGAT...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACGTTGGTATGGAATACTaGTCACTGGATCTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYVGMEY*SLDLLQ
Trigger: CTGAAGAAGATCCAGTGACAAGTATTCCATACCAAC...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCATCAGCCTGTTCTGTTaGCTTCCATTTCTGTTCCAA +
Preference number: 5 (lower is better)
Translates to: VIASQSFKAETPFTNPTSISLFC*LPFLFQ
Trigger: TTGGAACAGAAATGGAAGCAAACAGAACAGGCTGAT...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACTAGTAGAAGCCCCATaGGTGTATCTTCTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVLVEAP*VYLLLL
Trigger: AAGGAGAAGAAGATACACCAATGGGGCTTCTACTAG...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTCACTGTCCACTGAACTaGTACTCCTGTCATTATTCA +
Preference number: 5 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSHCPLN*YSCHYS
Trigger: TGAATAATGACAGGAGTACAAGTTCAGTGGACAGTG...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCCATGGCTCTTGTTCATaGACCAAAAGCTGGTATACT +
Preference number: 5 (lower is better)
Translates to: VIASQSFKAETPFTNPTSHGSCS*TKSWYT
Trigger: AGTATACCAGCTTTTGGTCAATGAACAAGAGCCATG...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCATGGCTCTTGTTCATaGACCAAAAGCTGGTATACT +
Preference number: 5 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYHGSCS*TKSWYT
Trigger: AGTATACCAGCTTTTGGTCAATGAACAAGAGCCATG...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCAAACTTGCATGGCTCTaGTTCATTGACCAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: VIASQSFKAETPFTNPTSKLAWL*FIDQKL
Trigger: CAGCTTTTGGTCAATGAACAAGAGCCATGCAAGTTT...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAAGAGTCTTTGAGTCCTaGACATTGAGGAGGAAACCA +
Preference number: 5 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVRVFES*TLRRKP
Trigger: TGGTTTCCTCCTCAATGTCAAGGACTCAAAGACTCT...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS CCA 90 bp CTTACAACGTTCACAAAAATACTGATTTGGGCCATCCAGAATCTCTaGCTGAATAAATGCATGCAATGCTTCTTCCACACTAGCAAATGC +
Preference number: 5 (lower is better)
Translates to: LTTFTKILIWAIQNL*LNKCMQCFFHTSKC
Trigger: GCATTTGCTAGTGTGGAAGAAGCATTGCATGCATTTATTCAGCCAGAGATTCTGGATGGCCCAAATCAGTATTTTTGTGAACGTTGTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTGAGTCAGATCTTTATTaGGTGCTCCATCCAGATATA +
Preference number: 5 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSESDLY*VLHPDI
Trigger: TATATCTGGATGGAGCACCAAATAAAGATCTGACTC...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGACAAGTCTGCCTCTTTaGTGTGATAGCAAGTCAGTC +
Preference number: 5 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWTSLPL*CDSKSV
Trigger: GACTGACTTGCTATCACACAAAAGAGGCAGACTTGT...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATACAGCTTTTGTTTCTTaGGCCAGAATGCACCCCTCA +
Preference number: 5 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYTAFVS*ARMHPS
Trigger: TGAGGGGTGCATTCTGGCCAAAGAAACAAAAGCTGT...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTTCAAATAGCAAGTCATaGCTTGGTTTACTAGTCCCA +
Preference number: 5 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSSNSKS*LGLLVP
Trigger: TGGGACTAGTAAACCAAGCAATGACTTGCTATTTGA...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAGTTGGTATGGAATACTaGTCACTGGATCTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVVGMEY*SLDLLQ
Trigger: CTGAAGAAGATCCAGTGACAAGTATTCCATACCAAC...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTATCAACACCATCATCATaGGAGAAATCGTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVSTPSS*EKSLLI
Trigger: GATGAGCAACGATTTCTCCAATGATGATGGTGTTGA...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAGCGCTCAATTTCTCGTaGTCTCTTTTCTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVALNFS*SLFLFF
Trigger: GAAGAACAAGAAAAGAGACAACGAGAAATTGAGCGC...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCTAGTAGAAGCCCCATaGGTGTATCTTCTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWLVEAP*VYLLLL
Trigger: AAGGAGAAGAAGATACACCAATGGGGCTTCTACTAG...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTTCCAGGTTTATAAGATaGGAAAACCTGATCAGGCTT +
Preference number: 5 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSSRFIR*ENLIRL
Trigger: AAGCCTGATCAGGTTTTCCAATCTTATAAACCTGGA...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACTCCAGGTTTATAAGATaGGAAAACCTGATCAGGCTT +
Preference number: 5 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYSRFIR*ENLIRL
Trigger: AAGCCTGATCAGGTTTTCCAATCTTATAAACCTGGA...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTATCCAGGTTTATAAGATaGGAAAACCTGATCAGGCTT +
Preference number: 5 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILSRFIR*ENLIRL
Trigger: AAGCCTGATCAGGTTTTCCAATCTTATAAACCTGGA...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCAGCACTATTCTCATaGTTTCAGCAGGTAAATGGA +
Preference number: 5 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVPALFS*FQQVNG
Trigger: TCCATTTACCTGCTGAAACAATGAGAATAGTGCTGG...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACTGCAGTGACAAGCTTTaGAGTTTTTCAGTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYCSDKL*SFSVLS
Trigger: AGAAAGCACTGAAAAACTCAAAAGCTTGTCACTGCA...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACACTGTCCACTGAACTaGTACTCCTGTCATTATTCA +
Preference number: 5 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVHCPLN*YSCHYS
Trigger: TGAATAATGACAGGAGTACAAGTTCAGTGGACAGTG...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACATGGCTCTTGTTCATaGACCAAAAGCTGGTATACT +
Preference number: 5 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVHGSCS*TKSWYT
Trigger: AGTATACCAGCTTTTGGTCAATGAACAAGAGCCATG...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAAAACTTGCATGGCTCTaGTTCATTGACCAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVKLAWL*FIDQKL
Trigger: CAGCTTTTGGTCAATGAACAAGAGCCATGCAAGTTT...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS TCA 90 bp GTTCAAGTTCTCTATTATCCACTGATGCTGAAGAGTCCCTCTCATTaGGAGGTGATTCGATGTTTTCAAAGTCACTTGTCTCAGTACTTT +
Preference number: 5 (lower is better)
Translates to: VQVLYYPLMLKSPSH*EVIRCFQSHLSQYF
Trigger: AAAGTACTGAGACAAGTGACTTTGAAAACATCGAATCACCTCTCAATGAGAGGGACTCTTCAGCATCAGTGGATAATAGAGAACTTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000525078.1
ENST00000527733.7
CDS TCA 90 bp CTGCTTATGCCAAATGCCCAAACTCTCAGATCTTTTCCCTCTTTCTaGGATTATGCATTGGAATTTCTAGTAACTCCTTGCTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: LLMPNAQTLRSFPSF*DYALEFLVTPCFGV
Trigger: AACTCCAAAGCAAGGAGTTACTAGAAATTCCAATGCATAATCTCAGAAAGAGGGAAAAGATCTGAGAGTTTGGGCATTTGGCATAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530041.5
CDS CCA 90 bp CAAAGAAATCACAATCTGGAGCACTTGCCTACACACCATAGTAGATaGTATCCTAGTTGTTCCTTACCTCCCAACTTAACTTGTCAATTA +
Preference number: 5 (lower is better)
Translates to: QRNHNLEHLPTHHSR*YPSCSLPPNLTCQL
Trigger: TAATTGACAAGTTAAGTTGGGAGGTAAGGAACAACTAGGATACCATCTACTATGGTGTGTAGGCAAGTGCTCCAGATTGTGATTTCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS-3UTR CAA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAGAGTCAGATCTTTATTaGGTGCTCCATCCAGATATA +
Preference number: 5 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVESDLY*VLHPDI
Trigger: TATATCTGGATGGAGCACCAAATAAAGATCTGACTC...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCGGCTATGTGCACATTaGTCCGCAATAAAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWRLCAH*SAIKEV
Trigger: AACTTCTTTTATTGCGGACAAATGTGCACATAGCCG...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGTGCAATGAAATCATGTaGACTGCATCAGTCTGTACC +
Preference number: 5 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWCNEIM*TASVCT
Trigger: GGTACAGACTGATGCAGTCAACATGATTTCATTGCA...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCATGGCAGAGCCACATTaGCTAACAGTATTTTCTAAT +
Preference number: 5 (lower is better)
Translates to: VIASQSFKAETPFTNPTSMAEPH*LTVFSN
Trigger: ATTAGAAAATACTGTTAGCAAATGTGGCTCTGCCAT...GGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATACAAGTCTGCCTCTTTaGTGTGATAGCAAGTCAGTC +
Preference number: 5 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYTSLPL*CDSKSV
Trigger: GACTGACTTGCTATCACACAAAAGAGGCAGACTTGT...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACCCAATGCTTATTTCATaGGATTATTTTCTGACTGGG +
Preference number: 5 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYPMLIS*DYFLTG
Trigger: CCCAGTCAGAAAATAATCCAATGAAATAAGCATTGG...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTATTTCTTAATGTCCTCTaGTGTTATCCTGCTGACATG +
Preference number: 5 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVFLNVL*CYPADM
Trigger: CATGTCAGCAGGATAACACAAGAGGACATTAAGAAA...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACTTTATCTTGCATGTATaGCGCTCAATTTCTCGTTGT +
Preference number: 5 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYFILHV*RSISRC
Trigger: ACAACGAGAAATTGAGCGCAATACATGCAAGATAAA...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCACTGTCCACTGAACTaGTACTCCTGTCATTATTCA +
Preference number: 5 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWHCPLN*YSCHYS
Trigger: TGAATAATGACAGGAGTACAAGTTCAGTGGACAGTG...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTACGAATTAATTCCTCTTTaGATTGCCGTACAGTCATTC +
Preference number: 5 (lower is better)
Translates to: HTLFLSIMIALPYIHVPYELIPL*IAVQSF
Trigger: GAATGACTGTACGGCAATCAAAAGAGGAATTAATTC...GTACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp GGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCTGACTGGGACATGAGTAGGAAAACCTCCCAGTaGCTGGAAATATTAATATCT +
Preference number: 5 (lower is better)
Translates to: GLATNAYFIGLFSDWDMSRKTSQ*LEILIS
Trigger: AGATATTAATATTTCCAGCAACTGGGAGGTTTTCCT...ACTCATGTCCCAGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp AACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGATATTATGCAAAATTAGGGCCTaGACGCTGAACAAAATAAAA +
Preference number: 5 (lower is better)
Translates to: NQSCSPPSLDTLSKPPILCKIRA*TLNKIK
Trigger: TTTTATTTTGTTCAGCGTCAAGGCCCTAATTTTGCA...TAATATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS TCA 90 bp ATTTGTGGAACTTGCGAAAGCACTAGAATAATATCCTCTGCTTCCTaGAGATCCACCATGTGTTTTCTTAATGTCCTCTTGTGTTATCCT +
Preference number: 5 (lower is better)
Translates to: ICGTCESTRIISSAS*RSTMCFLNVLLCYP
Trigger: AGGATAACACAAGAGGACATTAAGAAAACACATGGTGGATCTTCAGGAAGCAGAGGATATTATTCTAGTGCTTTCGCAAGTTCCACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAAAGAGTCAACACACGTaGGATTTACTTCTGAATTGT +
Preference number: 5 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVKSQHT*DLLLNC
Trigger: ACAATTCAGAAGTAAATCCAACGTGTGTTGACTCTT...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGTCAAATAGCAAGTCATaGCTTGGTTTACTAGTCCCA +
Preference number: 5 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWSNSKS*LGLLVP
Trigger: TGGGACTAGTAAACCAAGCAATGACTTGCTATTTGA...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATCCACTTCTAGAAATTTaGCATTTCTGGCTGGATCCT +
Preference number: 5 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYPLLEI*HFWLDP
Trigger: AGGATCCAGCCAGAAATGCAAAATTTCTAGAAGTGG...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGGGCTCTAAATGTTGTTaGAAAGCTGCCAGAGTAATT +
Preference number: 5 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWGSKCC*KAARVI
Trigger: AATTACTCTGGCAGCTTTCAAACAACATTTAGAGCC...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTATGCAAAATTAGGGCCTaGACGCTGAACAAAATAAAA +
Preference number: 5 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVCKIRA*TLNKIK
Trigger: TTTTATTTTGTTCAGCGTCAAGGCCCTAATTTTGCA...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp TCACACACTGTTCTTATCTATCATGATTGCTCTTCCTTACATACACGTCCCGTAGTTTGTGCAGTATTCTaGTTTCTGAAAGTCAAGTTG +
Preference number: 5 (lower is better)
Translates to: SHTVLIYHDCSSLHTRPVVCAVF*FLKVKL
Trigger: CAACTTGACTTTCAGAAACAAGAATACTGCACAAAC...TACGGGACGTGTATGTAAGGAAGAGCAATCATGATAGATAAGAACAGTGTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS-3UTR CAA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATCAGCAGTATTTGAGGTaGTTCACCATCTTTATCTGT +
Preference number: 5 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYQQYLR*FTIFIC
Trigger: ACAGATAAAGATGGTGAACAACCTCAAATACTGCTG...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATCATCTGTGGTTTCAATaGCTCTCTTTTTGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYHLWFQ*LSFCWF
Trigger: AAACCAGCAAAAAGAGAGCAATTGAAACCACAGATG...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGTGCAAAATTAGGGCCTaGACGCTGAACAAAATAAAA +
Preference number: 5 (lower is better)
Translates to: LYSTFDYSAQHDSESKQWCKIRA*TLNKIK
Trigger: TTTTATTTTGTTCAGCGTCAAGGCCCTAATTTTGCA...CCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS GCA 90 bp ATTTCTCGTTGTCTCTTTTCTTGTTCTTCCAACTCTCTCTCTTTCTaGACCAAGTTTTTAATATGTTCTGGGTATTCATCCACTTCTAGA +
Preference number: 5 (lower is better)
Translates to: ISRCLFSCSSNSLSF*TKFLICSGYSSTSR
Trigger: TCTAGAAGTGGATGAATACCCAGAACATATTAAAAACTTGGTGCAGAAAGAGAGAGAGTTGGAAGAACAAGAAAAGAGACAACGAGAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATCCAATGCTTATTTCATaGGATTATTTTCTGACTGGG +
Preference number: 5 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYPMLIS*DYFLTG
Trigger: CCCAGTCAGAAAATAATCCAATGAAATAAGCATTGG...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATTTTCAAGTCCAGATTTaGAGATCTTTTCAGTTCCAC +
Preference number: 5 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYFQVQI*RSFQFH
Trigger: GTGGAACTGAAAAGATCTCAAAATCTGGACTTGAAA...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS-3UTR CAA 90 bp ACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGATTATGAATTAATTCCTCTTTaGATTGCCGTACAGTCATTC +
Preference number: 5 (lower is better)
Translates to: TIQFLTVAWQPMLISLDYELIPL*IAVQSF
Trigger: GAATGACTGTACGGCAATCAAAAGAGGAATTAATTC...ATAATCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS CCA 72 bp CGAGAATTCGGCCCGTCGGGCTCCAAGCCCGGCGCCTaGCGTCGGAGGTGGCCGGCACTTGTCGCTAGCTTC +
Preference number: 6 (lower is better)
Translates to: REFGPSGSKPGA*RRRWPALVASF
Trigger: GAAGCTAGCGACAAGTGCCGGCCACCTCCGACGCCAGGCGCCGGGCTTGGAGCCCGACGGGCCGAATTCTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS CCA 72 bp GCCGCCTGCGCTCCAGCAATAGCGGAGGCCTCAGCCTaGGCCTCAGACACCAGCGCGCAGACACCGACCCAG +
Preference number: 6 (lower is better)
Translates to: AACAPAIAEASA*ASDTSAQTPTQ
Trigger: CTGGGTCGGTGTCTGCGCGCTGGTGTCTGAGGCCCAGGCTGAGGCCTCCGCTATTGCTGGAGCGCAGGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000525257.1
ENST00000527733.7
CDS GCA 72 bp TGCCGGCCGGGGAAGGACCAGGCCCACTGTCCTCCCTaGCTTCTCGGGCTCTTCGGACTCTCTGCCCTGCAG +
Preference number: 6 (lower is better)
Translates to: CRPGKDQAHCPP*LLGLFGLSALQ
Trigger: CTGCAGGGCAGAGAGTCCGAAGAGCCCGAGAAGGCAGGGAGGACAGTGGGCCTGGTCCTTCCCCGGCCGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS GCA 72 bp AGAGGAGAGCTGGACGTTCCATCTCGGGACTCCCTCTaGCGGCCGGGGAAGGACCAGGCCCACTGTCCTCCC +
Preference number: 6 (lower is better)
Translates to: RGELDVPSRDSL*RPGKDQAHCPP
Trigger: GGGAGGACAGTGGGCCTGGTCCTTCCCCGGCCGGCAGAGGGAGTCCCGAGATGGAACGTCCAGCTCTCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS GCA 72 bp GAGAGAATGGCAGCGGCAGTCATCCTCTCCGCCGCCTaGGCTCCAGCAATAGCGGAGGCCTCAGCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: ERMAAAVILSAA*APAIAEASAWA
Trigger: GGCCCAGGCTGAGGCCTCCGCTATTGCTGGAGCGCAGGCGGCGGAGAGGATGACTGCCGCTGCCATTCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000525257.1
ENST00000527733.7
CDS GCA 72 bp CTCCCTGCCTTCTCGGGCTCTTCGGACTCTCTGCCCTaGAGGGAAAGACTCGAGCCGAAAGCCCCATCTCTG +
Preference number: 6 (lower is better)
Translates to: LPAFSGSSDSLP*RERLEPKAPSL
Trigger: CAGAGATGGGGCTTTCGGCTCGAGTCTTTCCCTGCAGGGCAGAGAGTCCGAAGAGCCCGAGAAGGCAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS GCA 72 bp CTGTCCTCCCTGCCTTCTCGGGCTCTTCGGACTCTCTaGCCTGCAGGGAAAGACTCGAGCCGAAAGCCCCAT +
Preference number: 6 (lower is better)
Translates to: LSSLPSRALRTL*PAGKDSSRKPH
Trigger: ATGGGGCTTTCGGCTCGAGTCTTTCCCTGCAGGGCAGAGAGTCCGAAGAGCCCGAGAAGGCAGGGAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS CCA 72 bp AGACAGCCATGCAAACGCTTTTCGTTAGAGGAGAGCTaGACGTTCCATCTCGGGACTCCCTCTGCCGGCCGG +
Preference number: 6 (lower is better)
Translates to: RQPCKRFSLEES*TFHLGTPSAGR
Trigger: CCGGCCGGCAGAGGGAGTCCCGAGATGGAACGTCCAGCTCTCCTCTAACGAAAAGCGTTTGCATGGCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS CCA 72 bp CTGCATCTCCAAAACACATCCTCTTTCGGGACCAGTTaGTTCTCCTCGCCGGGCACCATCGCTGACTCCGGC +
Preference number: 6 (lower is better)
Translates to: LHLQNTSSFGTS*FSSPGTIADSG
Trigger: GCCGGAGTCAGCGATGGTGCCCGGCGAGGAGAACCAACTGGTCCCGAAAGAGGATGTGTTTTGGAGATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399455.2
CDS CAA 90 bp GCTTCTAGTCACCTCGGCTCTTCCTCAGCCCCGGGAGGTACAGAATaGGCGAGACAGCCATGCAAACGCTTTTCGTTAGAGGAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: ASSHLGSSSAPGGTE*ARQPCKRFSLEESW
Trigger: CCAGCTCTCCTCTAACGAAAAGCGTTTGCATGGCTGTCTCGCCAATTCTGTACCTCCCGGGGCTGAGGAAGAGCCGAGGTGACTAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS CCA 72 bp TCTTCAGCAGCATTTTCTATCTCTTTCGGGACCAGTTaGTTCTCCTCGCCGGGCACCATCGCTGACTCCGGC +
Preference number: 6 (lower is better)
Translates to: SSAAFSISFGTS*FSSPGTIADSG
Trigger: GCCGGAGTCAGCGATGGTGCCCGGCGAGGAGAACCAACTGGTCCCGAAAGAGATAGAAAATGCTGCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527733.7
CDS CAA 72 bp CACCTCGGCTCTTCCTCAGCCCCGGGAGGTACAGAATaGGCGAGACAGCCATGCAAACGCTTTTCGTTAGAG +
Preference number: 6 (lower is better)
Translates to: HLGSSSAPGGTE*ARQPCKRFSLE
Trigger: CTCTAACGAAAAGCGTTTGCATGGCTGTCTCGCCAATTCTGTACCTCCCGGGGCTGAGGAAGAGCCGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS GCA 72 bp TCAGCCCCGGGAGGTACAGAATTGGCGAGACAGCCATaGAAACGCTTTTCGTTAGAGGAGAGCTGGACGTTC +
Preference number: 6 (lower is better)
Translates to: SAPGGTELARQP*KRFSLEESWTF
Trigger: GAACGTCCAGCTCTCCTCTAACGAAAAGCGTTTGCATGGCTGTCTCGCCAATTCTGTACCTCCCGGGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS TCA 72 bp GAACCTTCTCTTGGAAGCGGACCTATAAACCTGTCATaGACACTGTCTTCCCCAGCACTGGAATCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: EPSLGSGPINLS*TLSSPALESSS
Trigger: GCTGGAGGATTCCAGTGCTGGGGAAGACAGTGTTCATGACAGGTTTATAGGTCCGCTTCCAAGAGAAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS CAA 90 bp CCTCCTGGAAGGGATCCAACTTCATCTCTGAAGGCTTCCACCGTCTaGACAAAACTGCAAGCTGTGACATGGACTTCATCTTCTCTACCC +
Preference number: 6 (lower is better)
Translates to: PPGRDPTSSLKASTV*TKLQAVTWTSSSLP
Trigger: GGGTAGAGAAGATGAAGTCCATGTCACAGCTTGCAGTTTTGTCAAGACGGTGGAAGCCTTCAGAGATGAAGTTGGATCCCTTCCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305481.10
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
ENST00000529813.1
CDS TCA 72 bp TCAAAATTAGCGTCGAGAAGTGACTTGTCACTGGTATaGTCCAGTGGTGCCTCTTTCGGGACCAGTTGGTTC +
Preference number: 6 (lower is better)
Translates to: SKLASRSDLSLV*SSGASFGTSWF
Trigger: GAACCAACTGGTCCCGAAAGAGGCACCACTGGATCATACCAGTGACAAGTCACTTCTCGACGCTAATTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS CCA 72 bp AAATGCTTGGCTGGACCCATAAGGTCGGATGACCAATaGAATATCAAGATATGTGTCGATTCGCCAGCCCTC +
Preference number: 6 (lower is better)
Translates to: KCLAGPIRSDDQ*NIKICVDSPAL
Trigger: GAGGGCTGGCGAATCGACACATATCTTGATATTCCATTGGTCATCCGACCTTATGGGTCCAGCCAAGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS CCA 72 bp CGAAAACTGGGAGGTGTGACAAGTATGTCTGCTACTTaGACCTCCTCAAGGTCACTGCTATGGGTTGAATTG +
Preference number: 6 (lower is better)
Translates to: RKLGGVTSMSAT*TSSRSLLWVEL
Trigger: CAATTCAACCCATAGCAGTGACCTTGAGGAGGTCCAAGTAGCAGACATACTTGTCACACCTCCCAGTTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS TCA 72 bp GACTGGGGTGATGTATCTACAAGCCAAGGTTGCCAATaGTGGCCAAAAACCACAGAAGCTAGGAGAGAGTAT +
Preference number: 6 (lower is better)
Translates to: DWGDVSTSQGCQ*WPKTTEARREY
Trigger: ATACTCTCTCCTAGCTTCTGTGGTTTTTGGCCATCATTGGCAACCTTGGCTTGTAGATACATCACCCCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS GCA 72 bp TTGATAACGAAAACTGGGAGGTGTGACAAGTATGTCTaGTACTTGGACCTCCTCAAGGTCACTGCTATGGGT +
Preference number: 6 (lower is better)
Translates to: LITKTGRCDKYV*YLDLLKVTAMG
Trigger: ACCCATAGCAGTGACCTTGAGGAGGTCCAAGTAGCAGACATACTTGTCACACCTCCCAGTTTTCGTTATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS CCA 72 bp AATTCGTCCACACTACTGCTTTCCAATACAACCTCCTaGAAGGGATCCAACTTCATCTCTGAAGGCTTCCAC +
Preference number: 6 (lower is better)
Translates to: NSSTLLLSNTTS*KGSNFISEGFH
Trigger: GTGGAAGCCTTCAGAGATGAAGTTGGATCCCTTCCAGGAGGTTGTATTGGAAAGCAGTAGTGTGGACGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305481.10
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
ENST00000529813.1
CDS CCA 72 bp GACATAATCACTGGTAGAACCCCCAGAACCTTCTCTTaGAAGCGGACCTATAAACCTGTCATGAACACTGTC +
Preference number: 6 (lower is better)
Translates to: DIITGRTPRTFS*KRTYKPVMNTV
Trigger: GACAGTGTTCATGACAGGTTTATAGGTCCGCTTCCAAGAGAAGGTTCTGGGGGTTCTACCAGTGATTATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS CAA 72 bp AGGGATCCAACTTCATCTCTGAAGGCTTCCACCGTCTaGACAAAACTGCAAGCTGTGACATGGACTTCATCT +
Preference number: 6 (lower is better)
Translates to: RDPTSSLKASTV*TKLQAVTWTSS
Trigger: AGATGAAGTCCATGTCACAGCTTGCAGTTTTGTCAAGACGGTGGAAGCCTTCAGAGATGAAGTTGGATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305481.10
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
ENST00000529813.1
CDS CAA 90 bp TCAGGCTTTCTCGTCTCCAACAGCAGATCAAACATATATGTTGACTaGACGCCACCTAGTAGAAGCCCCATTGGTGTATCTTCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: SGFLVSNSRSNIYVD*TPPSRSPIGVSSSP
Trigger: AGGAGAAGAAGATACACCAATGGGGCTTCTACTAGGTGGCGTCAAGTCAACATATATGTTTGATCTGCTGTTGGAGACGAGAAAGCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS CAA 90 bp TTGAGAGGTGATTCGATGTTTTCAAAGTCACTTGTCTCAGTACTTTaGCTGCTGTCCCCATTATCTCCATCCTGCTGTTGCTGCAGTGAC +
Preference number: 6 (lower is better)
Translates to: LRGDSMFSKSLVSVL*LLSPLSPSCCCCSD
Trigger: GTCACTGCAGCAACAGCAGGATGGAGATAATGGGGACAGCAGCAAAAGTACTGAGACAAGTGACTTTGAAAACATCGAATCACCTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000525078.1
ENST00000527733.7
CDS TCA 72 bp GTTCTTCTTTCCTGGCTCAAAATTAGCGTCGAGAAGTaGCTTGTCACTGGTATGATCCAGTGGTGCCTCTTT +
Preference number: 6 (lower is better)
Translates to: VLLSWLKISVEK*LVTGMIQWCLF
Trigger: AAAGAGGCACCACTGGATCATACCAGTGACAAGTCACTTCTCGACGCTAATTTTGAGCCAGGAAAGAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339865.9
CDS TCA 72 bp CACTGGTATGATCCAGTGGTGCCATATCAGCAGTATTaGTTCCATTTCCCCACACCAAGTCAAAGGTTCCAT +
Preference number: 6 (lower is better)
Translates to: HWYDPVVPYQQY*FHFPTPSQRFH
Trigger: ATGGAACCTTTGACTTGGTGTGGGGAAATGGAATCAATACTGCTGATATGGCACCACTGGATCATACCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399455.2
ENST00000525257.1
ENST00000525367.1
ENST00000527733.7
CDS TCA 72 bp GTTCTTCTTTCCTGGCTCAAAATTAGCGTCGAGAAGTaGCTTGTCACTGGTATGATCCAGTGGTGCCATATC +
Preference number: 6 (lower is better)
Translates to: VLLSWLKISVEK*LVTGMIQWCHI
Trigger: GATATGGCACCACTGGATCATACCAGTGACAAGTCACTTCTCGACGCTAATTTTGAGCCAGGAAAGAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399455.2
ENST00000525367.1
ENST00000527733.7
CDS GCA 72 bp GCATCAAACATGACTCTGCATAGTTCTTGTACATCATaGTGCTGCCAAGCCTCACTACTATCCCATCCAAAG +
Preference number: 6 (lower is better)
Translates to: ASNMTLHSSCTS*CCQASLLSHPK
Trigger: CTTTGGATGGGATAGTAGTGAGGCTTGGCAGCAGCATGATGTACAAGAACTATGCAGAGTCATGTTTGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS GCA 72 bp GTCAAGTCCATTAGCCAAAGGGATCTGAGCATTGTCTaGATTGCACAAAGTATCACTGCTATGACTGGAGCT +
Preference number: 6 (lower is better)
Translates to: VKSISQRDLSIV*IAQSITAMTGA
Trigger: AGCTCCAGTCATAGCAGTGATACTTTGTGCAATGCAGACAATGCTCAGATCCCTTTGGCTAATGGACTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000525078.1
ENST00000527733.7
CDS CCA 72 bp TCCCTACGACCCCAGATACTCAAAGAAATCACAATCTaGAGCACTTGCCTACACACCATAGTAGATGGTATC +
Preference number: 6 (lower is better)
Translates to: SLRPQILKEITI*STCLHTIVDGI
Trigger: GATACCATCTACTATGGTGTGTAGGCAAGTGCTCCAGATTGTGATTTCTTTGAGTATCTGGGGTCGTAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS CAA 72 bp AAATGCATGCAATGCTTCTTCCACACTAGCAAATGCTaGGCTGGACCCATAAGGTCGGATGACCAATGGAAT +
Preference number: 6 (lower is better)
Translates to: KCMQCFFHTSKC*AGPIRSDDQWN
Trigger: ATTCCATTGGTCATCCGACCTTATGGGTCCAGCCAAGCATTTGCTAGTGTGGAAGAAGCATTGCATGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS CAA 72 bp CTCGTCTCCAACAGCAGATCAAACATATATGTTGACTaGACGCCACCTAGTAGAAGCCCCATTGGTGTATCT +
Preference number: 6 (lower is better)
Translates to: LVSNSRSNIYVD*TPPSRSPIGVS
Trigger: AGATACACCAATGGGGCTTCTACTAGGTGGCGTCAAGTCAACATATATGTTTGATCTGCTGTTGGAGACGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS CAA 90 bp TTCCCTACGACCCCAGATACTCAAAGAAATCACAATCTGGAGCACTaGCCTACACACCATAGTAGATGGTATCCTAGTTGTTCCTTACCT +
Preference number: 6 (lower is better)
Translates to: FPTTPDTQRNHNLEH*PTHHSRWYPSCSLP
Trigger: AGGTAAGGAACAACTAGGATACCATCTACTATGGTGTGTAGGCAAGTGCTCCAGATTGTGATTTCTTTGAGTATCTGGGGTCGTAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS TCA 72 bp CCCCCAGGGAAAATGCTACACTATCAGAGTCAGTCTTaGGTCAGATCTTTATTTGGTGCTCCATCCAGATAT +
Preference number: 6 (lower is better)
Translates to: PPGKMLHYQSQS*VRSLFGAPSRY
Trigger: ATATCTGGATGGAGCACCAAATAAAGATCTGACTCAAGACTGACTCTGATAGTGTAGCATTTTCCCTGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305481.10
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
ENST00000529813.1
CDS TCA 72 bp TCGTCTCCAACAGCAGATCAAACATATATGTTGACTTaGCGCCACCTAGTAGAAGCCCCATTGGTGTATCTT +
Preference number: 6 (lower is better)
Translates to: SSPTADQTYMLT*RHLVEAPLVYL
Trigger: AAGATACACCAATGGGGCTTCTACTAGGTGGCGTCAAGTCAACATATATGTTTGATCTGCTGTTGGAGACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS TCA 72 bp CAAACTCTTGATTGCTGGCATACACTCGAAAGACCTTaGAGTGAGAGGACAAAACTCCAACAAAGGGCTCTA +
Preference number: 6 (lower is better)
Translates to: QTLDCWHTLERP*SERTKLQQRAL
Trigger: TAGAGCCCTTTGTTGGAGTTTTGTCCTCTCACTTCAAGGTCTTTCGAGTGTATGCCAGCAATCAAGAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
ENST00000530041.5
ENST00000531513.5
CDS TCA 72 bp AAATGTGCCAATGTTGATAACGAAAACTGGGAGGTGTaGCAAGTATGTCTGCTACTTGGACCTCCTCAAGGT +
Preference number: 6 (lower is better)
Translates to: KCANVDNENWEV*QVCLLLGPPQG
Trigger: ACCTTGAGGAGGTCCAAGTAGCAGACATACTTGTCACACCTCCCAGTTTTCGTTATCAACATTGGCACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS GCA 72 bp ATCCACATTACCAGAATCGCCTCCAGCTTTCTGGTATaGTGTCCTTTTGGAATAAGATACTGGGGATTGTTC +
Preference number: 6 (lower is better)
Translates to: IHITRIASSFLV*CPFGIRYWGLF
Trigger: GAACAATCCCCAGTATCTTATTCCAAAAGGACAGCATACCAGAAAGCTGGAGGCGATTCTGGTAATGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000525078.1
ENST00000527733.7
CDS CCA 72 bp CACAATCTGGAGCACTTGCCTACACACCATAGTAGATaGTATCCTAGTTGTTCCTTACCTCCCAACTTAACT +
Preference number: 6 (lower is better)
Translates to: HNLEHLPTHHSR*YPSCSLPPNLT
Trigger: AGTTAAGTTGGGAGGTAAGGAACAACTAGGATACCATCTACTATGGTGTGTAGGCAAGTGCTCCAGATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS CAA 72 bp GATTCGATGTTTTCAAAGTCACTTGTCTCAGTACTTTaGCTGCTGTCCCCATTATCTCCATCCTGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: DSMFSKSLVSVL*LLSPLSPSCCC
Trigger: GCAACAGCAGGATGGAGATAATGGGGACAGCAGCAAAAGTACTGAGACAAGTGACTTTGAAAACATCGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000525078.1
ENST00000527733.7
CDS TCA 72 bp CTGTTTGCTTCCATTTCTGTTCCAAAGCATCAAACATaGCTCTGCATAGTTCTTGTACATCATGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: LFASISVPKHQT*LCIVLVHHAAA
Trigger: GGCAGCAGCATGATGTACAAGAACTATGCAGAGTCATGTTTGATGCTTTGGAACAGAAATGGAAGCAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS TCA 72 bp TCAATACTGAGCTCTAAACCACATTGCTCCCTGAGCTaGGGAATTAATTCCTCTTTTGATTGCCGTACAGTC +
Preference number: 6 (lower is better)
Translates to: SILSSKPHCSLS*GINSSFDCRTV
Trigger: GACTGTACGGCAATCAAAAGAGGAATTAATTCCTCAGCTCAGGGAGCAATGTGGTTTAGAGCTCAGTATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
ENST00000530369.1
CDS TCA 72 bp TCAAAATTAGCGTCGAGAAGTGACTTGTCACTGGTATaGTCCAGTGGTGCCATATCAGCAGTATTGATTCCA +
Preference number: 6 (lower is better)
Translates to: SKLASRSDLSLV*SSGAISAVLIP
Trigger: TGGAATCAATACTGCTGATATGGCACCACTGGATCATACCAGTGACAAGTCACTTCTCGACGCTAATTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399455.2
ENST00000525367.1
ENST00000527733.7
CDS GCA 72 bp CCCCAGATACTCAAAGAAATCACAATCTGGAGCACTTaGCTACACACCATAGTAGATGGTATCCTAGTTGTT +
Preference number: 6 (lower is better)
Translates to: PQILKEITIWST*LHTIVDGILVV
Trigger: AACAACTAGGATACCATCTACTATGGTGTGTAGGCAAGTGCTCCAGATTGTGATTTCTTTGAGTATCTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS CAA 72 bp TTCCCCAGCACTGGAATCCTCCAGCAGTATTTGAGGTaGTTCACCATCTTTATCTGTCAAATGCAGAAAGTT +
Preference number: 6 (lower is better)
Translates to: FPSTGILQQYLR*FTIFICQMQKV
Trigger: AACTTTCTGCATTTGACAGATAAAGATGGTGAACAACCTCAAATACTGCTGGAGGATTCCAGTGCTGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS CAA 90 bp CCTATAAGCCTCCCTCCAAACACCAATACTTTAAATGTGCCAATGTaGATAACGAAAACTGGGAGGTGTGACAAGTATGTCTGCTACTTG +
Preference number: 6 (lower is better)
Translates to: PISLPPNTNTLNVPM*ITKTGRCDKYVCYL
Trigger: CAAGTAGCAGACATACTTGTCACACCTCCCAGTTTTCGTTATCAACATTGGCACATTTAAAGTATTGGTGTTTGGAGGGAGGCTTATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS TCA 72 bp CTCTATTATCCACTGATGCTGAAGAGTCCCTCTCATTaGGAGGTGATTCGATGTTTTCAAAGTCACTTGTCT +
Preference number: 6 (lower is better)
Translates to: LYYPLMLKSPSH*EVIRCFQSHLS
Trigger: AGACAAGTGACTTTGAAAACATCGAATCACCTCTCAATGAGAGGGACTCTTCAGCATCAGTGGATAATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000525078.1
ENST00000527733.7
CDS GCA 72 bp TGTGACAACTACCTTCATTTTCTGCTCCACTGTCAGTaGAACTTTCAGTCTGAGGAGATTTCTCATCTTCAA +
Preference number: 6 (lower is better)
Translates to: CDNYLHFLLHCQ*NFQSEEISHLQ
Trigger: TTGAAGATGAGAAATCTCCTCAGACTGAAAGTTGCACTGACAGTGGAGCAGAAAATGAAGGTAGTTGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS GCA 72 bp GACAGGTTTGCAGTTCTGTTTCTTCCACAGACTGTGTaGACCAATAAGTGGTTCTTACTCATTTTTGTAGCA +
Preference number: 6 (lower is better)
Translates to: DRFAVLFLPQTV*TNKWFLLIFVA
Trigger: TGCTACAAAAATGAGTAAGAACCACTTATTGGTGCACACAGTCTGTGGAAGAAACAGAACTGCAAACCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS CCA 72 bp GTTCTGTTTCTTCCACAGACTGTGTGCACCAATAAGTaGTTCTTACTCATTTTTGTAGCACAAGGGATTAGC +
Preference number: 6 (lower is better)
Translates to: VLFLPQTVCTNK*FLLIFVAQGIS
Trigger: GCTAATCCCTTGTGCTACAAAAATGAGTAAGAACCACTTATTGGTGCACACAGTCTGTGGAAGAAACAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS CAA 72 bp ATGAACTTTCACCATCACTTCTCCAGGTTTATAAGATaGGAAAACCTGATCAGGCTTTCTCGTCTCCAACAG +
Preference number: 6 (lower is better)
Translates to: MNFHHHFSRFIR*ENLIRLSRLQQ
Trigger: CTGTTGGAGACGAGAAAGCCTGATCAGGTTTTCCAATCTTATAAACCTGGAGAAGTGATGGTGAAAGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS CAA 72 bp TCTCTATTATCCACTGATGCTGAAGAGTCCCTCTCATaGAGAGGTGATTCGATGTTTTCAAAGTCACTTGTC +
Preference number: 6 (lower is better)
Translates to: SLLSTDAEESLS*RGDSMFSKSLV
Trigger: GACAAGTGACTTTGAAAACATCGAATCACCTCTCAATGAGAGGGACTCTTCAGCATCAGTGGATAATAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000525078.1
ENST00000527733.7
CDS CAA 72 bp GCTTTGAAATACATGTACTGCATTTCTCCCCTACTCTaGCCACTCTCATCATATTCACTATCAGTTCCAGAG +
Preference number: 6 (lower is better)
Translates to: ALKYMYCISPLL*PLSSYSLSVPE
Trigger: CTCTGGAACTGATAGTGAATATGATGAGAGTGGCAAGAGTAGGGGAGAAATGCAGTACATGTATTTCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000525078.1
ENST00000527733.7
ENST00000531513.5
CDS CAA 72 bp CTCCCTCCAAACACCAATACTTTAAATGTGCCAATGTaGATAACGAAAACTGGGAGGTGTGACAAGTATGTC +
Preference number: 6 (lower is better)
Translates to: LPPNTNTLNVPM*ITKTGRCDKYV
Trigger: GACATACTTGTCACACCTCCCAGTTTTCGTTATCAACATTGGCACATTTAAAGTATTGGTGTTTGGAGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS CAA 72 bp CAGTCCCTTAGTACCTATTATTTTAGAATGACAGGTTaGCAGTTCTGTTTCTTCCACAGACTGTGTGCACCA +
Preference number: 6 (lower is better)
Translates to: QSLSTYYFRMTG*QFCFFHRLCAP
Trigger: TGGTGCACACAGTCTGTGGAAGAAACAGAACTGCAAACCTGTCATTCTAAAATAATAGGTACTAAGGGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS CAA 90 bp TGTTCAAGTTCTCTATTATCCACTGATGCTGAAGAGTCCCTCTCATaGAGAGGTGATTCGATGTTTTCAAAGTCACTTGTCTCAGTACTT +
Preference number: 6 (lower is better)
Translates to: CSSSLLSTDAEESLS*RGDSMFSKSLVSVL
Trigger: AAGTACTGAGACAAGTGACTTTGAAAACATCGAATCACCTCTCAATGAGAGGGACTCTTCAGCATCAGTGGATAATAGAGAACTTGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000525078.1
ENST00000527733.7
CDS CAA 90 bp CTACTGATTCAGTCCCTTAGTACCTATTATTTTAGAATGACAGGTTaGCAGTTCTGTTTCTTCCACAGACTGTGTGCACCAATAAGTGGT +
Preference number: 6 (lower is better)
Translates to: LLIQSLSTYYFRMTG*QFCFFHRLCAPISG
Trigger: ACCACTTATTGGTGCACACAGTCTGTGGAAGAAACAGAACTGCAAACCTGTCATTCTAAAATAATAGGTACTAAGGGACTGAATCAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS TCA 72 bp TTCTTAATGTCCTCTTGTGTTATCCTGCTGACATGTTaGTCATTGAAGCTGTACCACTGCTCATCACTGAAT +
Preference number: 6 (lower is better)
Translates to: FLMSSCVILLTC*SLKLYHCSSLN
Trigger: ATTCAGTGATGAGCAGTGGTACAGCTTCAATGATCAACATGTCAGCAGGATAACACAAGAGGACATTAAGAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS TCA 72 bp ACTTGCGAAAGCACTAGAATAATATCCTCTGCTTCCTaGAGATCCACCATGTGTTTTCTTAATGTCCTCTTG +
Preference number: 6 (lower is better)
Translates to: TCESTRIISSAS*RSTMCFLNVLL
Trigger: CAAGAGGACATTAAGAAAACACATGGTGGATCTTCAGGAAGCAGAGGATATTATTCTAGTGCTTTCGCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS GCA 72 bp TGTTTGAAAGCTGCCAGAGTAATTCTTTTATCAACATaGACCATCAACCATTTATGTCCTTCCCCAGAACCT +
Preference number: 6 (lower is better)
Translates to: CLKAARVILLST*TINHLCPSPEP
Trigger: AGGTTCTGGGGAAGGACATAAATGGTTGATGGTGCATGTTGATAAAAGAATTACTCTGGCAGCTTTCAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
ENST00000531513.5
CDS GCA 72 bp TTCCTTCATCAACACCATCATCATTGGAGAAATCGTTaGTCATCTGATCACTGTGACAACTACCTTCATTTT +
Preference number: 6 (lower is better)
Translates to: FLHQHHHHWRNR*SSDHCDNYLHF
Trigger: AAAATGAAGGTAGTTGTCACAGTGATCAGATGAGCAACGATTTCTCCAATGATGATGGTGTTGATGAAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS TCA 72 bp TATTTCCTTTGGGAAACTGCATCCTCAAGTAGTAGGTaGCAGTGCACAAAAATTATAAATATGGGGCTTTCT +
Preference number: 6 (lower is better)
Translates to: YFLWETASSSSR*QCTKIINMGLS
Trigger: AGAAAGCCCCATATTTATAATTTTTGTGCACTGTCACCTACTACTTGAGGATGCAGTTTCCCAAAGGAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525367.1
CDS GCA 72 bp AAGTCTCATACTATGCTGGAATGTTTTTGTTGTTACTaGTTATGCCAAATGCCCAAACTCTCAGATCTTTTC +
Preference number: 6 (lower is better)
Translates to: KSHTMLECFCCY*LCQMPKLSDLF
Trigger: GAAAAGATCTGAGAGTTTGGGCATTTGGCATAAGCAGTAACAACAAAAACATTCCAGCATAGTATGAGACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530041.5
CDS CAA 72 bp ACAAAACAAAAAGCCTTTGAAGTTGGTATGGAATACTaGTCACTGGATCTTCTTCAGATTCTTCAAATTCCC +
Preference number: 6 (lower is better)
Translates to: TKQKAFEVGMEY*SLDLLQILQIP
Trigger: GGGAATTTGAAGAATCTGAAGAAGATCCAGTGACAAGTATTCCATACCAACTTCAAAGGCTTTTTGTTTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7
CDS CAA 72 bp CATTACCAATTACTCTCTTCTCTGGATTTCCAATCTTaGTTTCTCTATTGGCTCCTATCCCTATCTAAAATC +
Preference number: 6 (lower is better)
Translates to: HYQLLSSLDFQS*FLYWLLSLSKI
Trigger: GATTTTAGATAGGGATAGGAGCCAATAGAGAAACAAAGATTGGAAATCCAGAGAAGAGAGTAATTGGTAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529813.1
CDS CAA 72 bp ATTTTGTATCTTAAACCTGGTTGCCTTGCTAATTATTaGGCTGGCCTCAGTCTAAGGTTTTATAAAGGTTCT +
Preference number: 6 (lower is better)
Translates to: ILYLKPGCLANY*AGLSLRFYKGS
Trigger: AGAACCTTTATAAAACCTTAGACTGAGGCCAGCCAAATAATTAGCAAGGCAACCAGGTTTAAGATACAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530041.5
CDS CCA 72 bp AAAAAGCCTTTGAAGTTGGTATGGAATACTTGTCACTaGATCTTCTTCAGATTCTTCAAATTCCCACTTATA +
Preference number: 6 (lower is better)
Translates to: KKPLKLVWNTCH*IFFRFFKFPLI
Trigger: TATAAGTGGGAATTTGAAGAATCTGAAGAAGATCCAGTGACAAGTATTCCATACCAACTTCAAAGGCTTTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339865.9
ENST00000399455.2
ENST00000527733.7