Pregenerated sensors for USP46-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000248866Ensembl transcript IDs: ENST00000503051.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGGACCTGCGAGGTGCGGCTGCCGCAGCGGCGCGCCCCGGAGCCTaGCCCGGCATTCCAGTCCGAATAGAAAGAGGCAGGGAATCAAAT | + |
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Preference number: 5 (lower is better) Translates to: GDLRGAAAAAARPGA*PGIPVRIERGRESN Trigger: ATTTGATTCCCTGCCTCTTTCTATTCGGACTGGAATGCCGGGCCAGGCTCCGGGGCGCGCCGCTGCGGCAGCCGCACCTCGCAGGTCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503051.1 |
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| CDS TCA 90 bp | TCGGTAAGTCATCTGGGCAGGATCCTTGATCCTCTAAGCCTTATGTaGCTGATCGTCCCCGGCTCCCTGGCTCCCCGACGGCGAGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: SVSHLGRILDPLSLM*LIVPGSLAPRRRGG Trigger: CCCTCCTCGCCGTCGGGGAGCCAGGGAGCCGGGGACGATCAGTCACATAAGGCTTAGAGGATCAAGGATCCTGCCCAGATGACTTACCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503051.1 |
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| CDS GCA 90 bp | GTTCAATTTCCATTATGTCGATGGTGTTTTCAATCCTGTGAACTTTaGAATCCATGCGCCAATGTTGGCAGAAATACTGAACTCTTATTA | + |
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Preference number: 5 (lower is better) Translates to: VQFPLCRWCFQSCEL*NPCANVGRNTELLL Trigger: TAATAAGAGTTCAGTATTTCTGCCAACATTGGCGCATGGATTGCAAAGTTCACAGGATTGAAAACACCATCGACATAATGGAAATTGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503051.1 |
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| CDS GCA 90 bp | CCATTATGTCGATGGTGTTTTCAATCCTGTGAACTTTGCAATCCATaGGCCAATGTTGGCAGAAATACTGAACTCTTATTACAAAATTTT | + |
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Preference number: 5 (lower is better) Translates to: PLCRWCFQSCELCNP*ANVGRNTELLLQNF Trigger: AAAATTTTGTAATAAGAGTTCAGTATTTCTGCCAACATTGGCGCATGGATTGCAAAGTTCACAGGATTGAAAACACCATCGACATAATGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503051.1 |
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| CDS CCA 72 bp | GAAGGAGGCGGCGCGGCGGGGCCCGGGAACCCAGCCTaGAGCGCTCTGAGCGGCCGGCTCGGACTCACGCGG | + |
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Preference number: 6 (lower is better) Translates to: EGGGAAGPGNPA*SALSGRLGLTR Trigger: CCGCGTGAGTCCGAGCCGGCCGCTCAGAGCGCTCCAGGCTGGGTTCCCGGGCCCCGCCGCGCCGCCTCCTTC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503051.1 |
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| CDS TCA 72 bp | CATCTGGGCAGGATCCTTGATCCTCTAAGCCTTATGTaGCTGATCGTCCCCGGCTCCCTGGCTCCCCGACGG | + |
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Preference number: 6 (lower is better) Translates to: HLGRILDPLSLM*LIVPGSLAPRR Trigger: CCGTCGGGGAGCCAGGGAGCCGGGGACGATCAGTCACATAAGGCTTAGAGGATCAAGGATCCTGCCCAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503051.1 |
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| CDS TCA 72 bp | TATAGTGGAACTTCTGTGAAATTGAGTCCTGAGATCTaGGTTTTAGCCTTGAGGTTGCTCCTGACCTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: YSGTSVKLSPEI*VLALRLLLTLR Trigger: TCTCAAGGTCAGGAGCAACCTCAAGGCTAAAACTCAGATCTCAGGACTCAATTTCACAGAAGTTCCACTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503051.1 |
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| CDS CAA 72 bp | TCAAATCTTAAAGTTTTCTGGGCCTCCGTGCTGGGATaGGTCATAGTTCAGTTGTTTCCTGTCTTCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SNLKVFWASVLG*VIVQLFPVFSL Trigger: AAGAGAGAAGACAGGAAACAACTGAACTATGACCAATCCCAGCACGGAGGCCCAGAAAACTTTAAGATTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503051.1 |
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| CDS GCA 72 bp | CCATTATGTCGATGGTGTTTTCAATCCTGTGAACTTTaGAATCCATGCGCCAATGTTGGCAGAAATACTGAA | + |
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Preference number: 6 (lower is better) Translates to: PLCRWCFQSCEL*NPCANVGRNTE Trigger: TTCAGTATTTCTGCCAACATTGGCGCATGGATTGCAAAGTTCACAGGATTGAAAACACCATCGACATAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503051.1 |
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| CDS TCA 72 bp | TCAATTTCCATTATGTCGATGGTGTTTTCAATCCTGTaGACTTTGCAATCCATGCGCCAATGTTGGCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: SISIMSMVFSIL*TLQSMRQCWQK Trigger: TTTCTGCCAACATTGGCGCATGGATTGCAAAGTTCACAGGATTGAAAACACCATCGACATAATGGAAATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503051.1 |
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| CDS GCA 72 bp | CGATGGTGTTTTCAATCCTGTGAACTTTGCAATCCATaGGCCAATGTTGGCAGAAATACTGAACTCTTATTA | + |
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Preference number: 6 (lower is better) Translates to: RWCFQSCELCNP*ANVGRNTELLL Trigger: TAATAAGAGTTCAGTATTTCTGCCAACATTGGCGCATGGATTGCAAAGTTCACAGGATTGAAAACACCATCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503051.1 |
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| CDS TCA 72 bp | TCTTTCATAAGTCTGACAAGCTCTGCCATGTTCAACTaGTTTGTTGTGTATGTAATTCACTGCCTGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SFISLTSSAMFN*FVVYVIHCLSF Trigger: GAAACTCAGGCAGTGAATTACATACACAACAAATCAGTTGAACATGGCAGAGCTTGTCAGACTTATGAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503051.1 |
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