RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP45 (Homo sapiens)

Ensembl gene IDs: ENSG00000123552

Ensembl transcript IDs: ENST00000327681.10, ENST00000329966.10, ENST00000369232.2, ENST00000369233.6, ENST00000472914.6, ENST00000496090.6, ENST00000496518.6, ENST00000500704.7, ENST00000506871.5, ENST00000507717.5, ENST00000508908.1, ENST00000511403.5

Found 430 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTATCACCACTGTCAGTCTCCTTGGTGTACAGCAGTTTACCTGCTaGCAGAGGGTAAAGGGGTCCATCTGGCTGCACACCGGATCCACT +
Preference number: 1 (lower is better)
Translates to: LITTVSLLGVQQFTC*QRVKGSIWLHTGST
Trigger: AGTGGATCCGGTGTGCAGCCAGATGGACCCCTTTACCCTCTGTCAGCAGGTAAACTGCTGTACACCAAGGAGACTGACAGTGGTGATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR TCA 90 bp GGTAAAGGGGTCCATCTGGCTGCACACCGGATCCACTACTGGATCTaGACAGCCCAGTCTGCTTTGAAGCACTTTCAGATTCTGAAGGCT +
Preference number: 1 (lower is better)
Translates to: GKGVHLAAHRIHYWI*TAQSALKHFQILKA
Trigger: AGCCTTCAGAATCTGAAAGTGCTTCAAAGCAGACTGGGCTGTTCAGATCCAGTAGTGGATCCGGTGTGCAGCCAGATGGACCCCTTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR GCA 90 bp CTCAAGCATCTTCCCCACTCAGCCTCCCAACAGCATGAGCCACCATaGCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTAC +
Preference number: 1 (lower is better)
Translates to: LKHLPHSASQQHEPP*LANKLIPTITLLSY
Trigger: GTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGGTGGCTCATGCTGTTGGGAGGCTGAGTGGGGAAGATGCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR GCA 90 bp AAGCAGTGTAGTGGCCTTCTCTCATCGAGCCACTATGTTCCACTATaGCATAGAGACCGTAGAGAACTTTATCTCCCACACTTGCATTCT +
Preference number: 1 (lower is better)
Translates to: KQCSGLLSSSHYVPL*HRDRRELYLPHLHS
Trigger: AGAATGCAAGTGTGGGAGATAAAGTTCTCTACGGTCTCTATGGCATAGTGGAACATAGTGGCTCGATGAGAGAAGGCCACTACACTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR GCA 90 bp ATCTCCAGTTACAGTGCTGCTCAAACGAAGTTCAGAAATAGCTTCTaGCATTTCCTTATCACCACTGTCAGTCTCCTTGGTGTACAGCAG +
Preference number: 1 (lower is better)
Translates to: ISSYSAAQTKFRNSF*HFLITTVSLLGVQQ
Trigger: CTGCTGTACACCAAGGAGACTGACAGTGGTGATAAGGAAATGGCAGAAGCTATTTCTGAACTTCGTTTGAGCAGCACTGTAACTGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR TCA 90 bp ATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTCCACCATaGAGAGGGTGCAAGAGATATGTTTATGAAATGCCTCAATATAAT +
Preference number: 1 (lower is better)
Translates to: IGPWPTTCKLSLTPP*RGCKRYVYEMPQYN
Trigger: ATTATATTGAGGCATTTCATAAACATATCTCTTGCACCCTCTTCATGGTGGAGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR GCA 90 bp AAAGATCCGATCTATGAAGTTCATTTTCACACCTTCTTTTCCATATaGAGCACTCTCTTCAATAAACGGTTTATTTGCAGGAGTCTTTGG +
Preference number: 1 (lower is better)
Translates to: KDPIYEVHFHTFFSI*STLFNKRFICRSLW
Trigger: CCAAAGACTCCTGCAAATAAACCGTTTATTGAAGAGAGTGCTGCATATGGAAAAGAAGGTGTGAAAATGAACTTCATAGATCGGATCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506871.5
3UTR TCA 90 bp GTATGGGTATCTATCCAAATATTTGTCTTTGAAACAAGAAACAAGTaGCCATCCGATGAAAAGTGCATGCCTCTTAACAGTATCTTTCTG +
Preference number: 1 (lower is better)
Translates to: VWVSIQIFVFETRNK*PSDEKCMPLNSIFL
Trigger: CAGAAAGATACTGTTAAGAGGCATGCACTTTTCATCGGATGGTCACTTGTTTCTTGTTTCAAAGACAAATATTTGGATAGATACCCATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp CTAACATGGACCCACTGGCCTGCTGATTCATTATCAGCCGCTTTCAAACCAGGCATCCACTACTGGATCTaGACAGCCCAGTCTGCTTTG +
Preference number: 2 (lower is better)
Translates to: LTWTHWPADSLSAAFKPGIHYWI*TAQSAL
Trigger: CAAAGCAGACTGGGCTGTTCAGATCCAGTAGTGGAT...GCCTGGTTTGAAAGCGGCTGATAATGAATCAGCAGGCCAGTGGGTCCATGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR GCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGAGGGGTCCATCTGGCTaGACACCGGATCCACTACTG +
Preference number: 2 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRRGPSG*TPDPLL
Trigger: CAGTAGTGGATCCGGTGTGCAGCCAGATGGACCCCT...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR CCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAATGCACCTTGACCTCCTaGGCTCAAGCATCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: PCLANKLIPTITLLSYLKCTLTS*AQASSP
Trigger: TGGGGAAGATGCTTGAGCCCAGGAGGTCAAGGTGCA...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR CCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGGTAAAGGGGTCCATCTaGCTGCACACCGGATCCACT +
Preference number: 2 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRVKGSI*LHTGST
Trigger: AGTGGATCCGGTGTGCAGCCAGATGGACCCCTTTAC...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR TCA 90 bp CCGGATCCACTACTGGATCTGAACAGCCCAGTCTGCTTTGAAGCACTTTCAGATGGTTCACCAAAATGGTaGAAAAGTTCAGGACCATTT +
Preference number: 2 (lower is better)
Translates to: PDPLLDLNSPVCFEALSDGSPKW*KSSGPF
Trigger: AAATGGTCCTGAACTTTTTCACCATTTTGGTGAACC...ATCTGAAAGTGCTTCAAAGCAGACTGGGCTGTTCAGATCCAGTAGTGGATCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR TCA 90 bp CCGGATCCACTACTGGATCTGAACAGCCCAGTCTGCTTTGAAGCACTTTCAGATCATTTTTCTGGTATGTaGCAGTTTCTCCAGATGACA +
Preference number: 2 (lower is better)
Translates to: PDPLLDLNSPVCFEALSDHFSGM*QFLQMT
Trigger: TGTCATCTGGAGAAACTGTCACATACCAGAAAAATG...ATCTGAAAGTGCTTCAAAGCAGACTGGGCTGTTCAGATCCAGTAGTGGATCCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR TCA 90 bp TACATGTCTGTTTACTTTACGAAGACTCAAGCCAGCCTGATGAAATCTTTTCAGCAGCAGTTTACCTGCTaGCAGAGGGTAAAGGGGTCC +
Preference number: 2 (lower is better)
Translates to: YMSVYFTKTQASLMKSFQQQFTC*QRVKGS
Trigger: GGACCCCTTTACCCTCTGTCAGCAGGTAAACTGCTG...CTGAAAAGATTTCATCAGGCTGGCTTGAGTCTTCGTAAAGTAAACAGACATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR TCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAAGACCCACTGGCCTGCTaGTTCATTATCAGCCGCTTT +
Preference number: 2 (lower is better)
Translates to: PCLANKLIPTITLLSYLKDPLAC*FIISRF
Trigger: AAAGCGGCTGATAATGAATCAGCAGGCCAGTGGGTC...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR GCA 90 bp CTAACATGGACCCACTGGCCTGCTGATTCATTATCAGCCGCTTTCAAACCAGGCTTCAGAAATAGCTTCTaGCATTTCCTTATCACCACT +
Preference number: 2 (lower is better)
Translates to: LTWTHWPADSLSAAFKPGFRNSF*HFLITT
Trigger: AGTGGTGATAAGGAAATGGCAGAAGCTATTTCTGAA...GCCTGGTTTGAAAGCGGCTGATAATGAATCAGCAGGCCAGTGGGTCCATGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR CCA 90 bp TGGAGGGTGTTCTCACTTTCACATAAGCAGTGTAGTGGCCTTCTCTCATCGAGCATGGATCTTTCACCGTaGAGATCTTTGTTTCTTCTG +
Preference number: 2 (lower is better)
Translates to: WRVFSLSHKQCSGLLSSSMDLSP*RSLFLL
Trigger: CAGAAGAAACAAAGATCTCCACGGTGAAAGATCCAT...GCTCGATGAGAGAAGGCCACTACACTGCTTATGTGAAAGTGAGAACACCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR TCA 90 bp TCAAGCCAGCCTGATGAAATCTTTTCAGGTGGAGAATTAGGACAGCTGGAACAGAAGTTCAGGACCATTTaGGGAACATGCTATTCCTAC +
Preference number: 2 (lower is better)
Translates to: SSQPDEIFSGGELGQLEQKFRTI*GTCYSY
Trigger: GTAGGAATAGCATGTTCCTCAAATGGTCCTGAACTT...CTGTTCCAGCTGTCCTAATTCTCCACCTGAAAAGATTTCATCAGGCTGGCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR CAA 90 bp AGTGGGACTAGGCATTTACCTGGCACTTGCCTGCACTATCATTCATaGGCACTAATGATTAGGATGCTTGAACCATGCAGTTTTGTTTCT +
Preference number: 2 (lower is better)
Translates to: SGTRHLPGTCLHYHS*ALMIRMLEPCSFVS
Trigger: AGAAACAAAACTGCATGGTTCAAGCATCCTAATCATTAGTGCCAATGAATGATAGTGCAGGCAAGTGCCAGGTAAATGCCTAGTCCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp TCAAGCCAGCCTGATGAAATCTTTTCAGGTGGAGAATTAGGACAGCTGGAACAGTCTCAAGGAATGATTTaGCTTAGCCAGCATCATTTC +
Preference number: 2 (lower is better)
Translates to: SSQPDEIFSGGELGQLEQSQGMI*LSQHHF
Trigger: GAAATGATGCTGGCTAAGTCAAATCATTCCTTGAGA...CTGTTCCAGCTGTCCTAATTCTCCACCTGAAAAGATTTCATCAGGCTGGCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR TCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGTGTCAGCACTGTGACTaGCTCATAGCAAGTATGGGT +
Preference number: 2 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRCQHCD*LIASMG
Trigger: ACCCATACTTGCTATGAGTCAGTCACAGTGCTGACA...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR GCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGCCTTGGCCAACCACCTaGAAGTTATCCTTAACTCCA +
Preference number: 2 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRPWPTT*KLSLTP
Trigger: TGGAGTTAAGGATAACTTGCAGGTGGTTGGCCAAGG...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR GCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAATACCTGGCACTTGCCTaGACTATCATTCATTGGCAC +
Preference number: 2 (lower is better)
Translates to: PCLANKLIPTITLLSYLKYLALA*TIIHWH
Trigger: GTGCCAATGAATGATAGTGCAGGCAAGTGCCAGGTA...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR CCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAATCTGCAGGAATGCAGTaGTGTGATCATGGTTCACTG +
Preference number: 2 (lower is better)
Translates to: PCLANKLIPTITLLSYLKSAGMQ*CDHGSL
Trigger: CAGTGAACCATGATCACACCACTGCATTCCTGCAGA...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGCACTGTCTCAAGGAATaGTTTGACTTAGCCAGCATC +
Preference number: 2 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRHCLKE*FDLASI
Trigger: GATGCTGGCTAAGTCAAATCATTCCTTGAGACAGTG...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAATCACTGCTCTGGTACTaGGATCTCCATGATAACAGA +
Preference number: 2 (lower is better)
Translates to: PCLANKLIPTITLLSYLKSLLWY*DLHDNR
Trigger: TCTGTTATCATGGAGATCTCAGTACCAGAGCAGTGA...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGTCACTGCTCTGGTACTaGGATCTCCATGATAACAGA +
Preference number: 2 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRSLLWY*DLHDNR
Trigger: TCTGTTATCATGGAGATCTCAGTACCAGAGCAGTGA...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp GTCTGTTTACTTTACGAAGACTCAAGCCAGCCTGATGAAATCTTTTCAGGTGGATCTCTGTCAAAATCTTaGTCTCCAGTTACAGTGCTG +
Preference number: 2 (lower is better)
Translates to: VCLLYEDSSQPDEIFSGGSLSKS*SPVTVL
Trigger: CAGCACTGTAACTGGAGATCAAGATTTTGACAGAGA...TCCACCTGAAAAGATTTCATCAGGCTGGCTTGAGTCTTCGTAAAGTAAACAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR TCA 90 bp ACCGTGCTAGTTAATTCACCAATAAAGATCCGATCTATGAAGTTCATTTTCACAAGGTCATCAGGAGTTTaGGACCAGCCCAGCCAACAT +
Preference number: 2 (lower is better)
Translates to: TVLVNSPIKIRSMKFIFTRSSGV*DQPSQH
Trigger: ATGTTGGCTGGGCTGGTCTCAAACTCCTGATGACCT...TGTGAAAATGAACTTCATAGATCGGATCTTTATTGGTGAATTAACTAGCACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506871.5
3UTR-3UTR CCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGATCTATATTGGGCCTTaGCCAACCACCTGCAAGTTA +
Preference number: 2 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRIYIGP*PTTCKL
Trigger: TAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGAT...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTAAGTTCAGGACCATTTaGGGAACATGCTATTCCTAC +
Preference number: 2 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTKFRTI*GTCYSY
Trigger: GTAGGAATAGCATGTTCCTCAAATGGTCCTGAACTT...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAAGAAACAAGAAACAAGTaGCCATCCGATGAAAAGTGC +
Preference number: 2 (lower is better)
Translates to: PCLANKLIPTITLLSYLKETRNK*PSDEKC
Trigger: GCACTTTTCATCGGATGGTCACTTGTTTCTTGTTTC...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAAGCCTGGCTAACAAATTaGTACCAACTATCACTCTTC +
Preference number: 2 (lower is better)
Translates to: PCLANKLIPTITLLSYLKAWLTN*YQLSLF
Trigger: GAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGC...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGCTTTCATTCAGACGTaGCTCAGAATTCATGAGGCT +
Preference number: 2 (lower is better)
Translates to: KYFHTLSAATILILSSQEAFIQT*LRIHEA
Trigger: AGCCTCATGAATTCTGAGTCACGTCTGAATGAAAGC...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR GCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGCCATCCGATGAAAAGTaGATGCCTCTTAACAGTATC +
Preference number: 2 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRPSDEK*MPLNSI
Trigger: GATACTGTTAAGAGGCATGCACTTTTCATCGGATGG...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR CCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGATCTATATTGGGCCTTaGCCAACCACCTGCAAGTTA +
Preference number: 2 (lower is better)
Translates to: KYFHTLSAATILILSSQEIYIGP*PTTCKL
Trigger: TAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGAT...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR CCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAATATAATCATCTATATTaGGCCTTGGCCAACCACCTG +
Preference number: 2 (lower is better)
Translates to: PCLANKLIPTITLLSYLKYNHLY*ALANHL
Trigger: CAGGTGGTTGGCCAAGGCCCAATATAGATGATTATA...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGTCTCAAGGAATGATTTaGCTTAGCCAGCATCATTTC +
Preference number: 2 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRSQGMI*LSQHHF
Trigger: GAAATGATGCTGGCTAAGTCAAATCATTCCTTGAGA...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAAACCACTAGATGGCCCTaGGATGATTTTAAGTTAAGT +
Preference number: 2 (lower is better)
Translates to: PCLANKLIPTITLLSYLKTTRWP*DDFKLS
Trigger: ACTTAACTTAAAATCATCTCAGGGCCATCTAGTGGT...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp ATTTTCTCTGTCAAAATCTTGATCTCCAGTTACAGTGCTGCTCAAACGAAGTTCGTGACTCAGAATTCATaGGGCTGGCAAACATTAAAG +
Preference number: 2 (lower is better)
Translates to: IFSVKILISSYSAAQTKFVTQNS*GWQTLK
Trigger: CTTTAATGTTTGCCAGCCTCATGAATTCTGAGTCAC...GAACTTCGTTTGAGCAGCACTGTAACTGGAGATCAAGATTTTGACAGAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR GCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGCATTTACCTGGCACTTaGCTGCACTATCATTCATTG +
Preference number: 2 (lower is better)
Translates to: KYFHTLSAATILILSSQEHLPGT*LHYHSL
Trigger: CAATGAATGATAGTGCAGGCAAGTGCCAGGTAAATG...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR GCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGCCGATGAAAAGTGCATaGCTCTTAACAGTATCTTTC +
Preference number: 2 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRPMKSA*LLTVSF
Trigger: GAAAGATACTGTTAAGAGGCATGCACTTTTCATCGG...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR GCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTTTCTTCTGTCCTCACTaGATCCAGAAGATAATGAAG +
Preference number: 2 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTFFCPH*IQKIMK
Trigger: CTTCATTATCTTCTGGATGCAGTGAGGACAGAAGAA...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR TCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGGTTCACCAAAATGGTaGAAAAGTTCAGGACCATTT +
Preference number: 2 (lower is better)
Translates to: KYFHTLSAATILILSSQEGSPKW*KSSGPF
Trigger: AAATGGTCCTGAACTTTTTCACCATTTTGGTGAACC...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGAGCCAGCATCATTTCTaGATGCTTGTAATAATAAGC +
Preference number: 2 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRSQHHF*MLVIIS
Trigger: GCTTATTATTACAAGCATTCAGAAATGATGCTGGCT...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGTCTCAAGGAATGATTTaGCTTAGCCAGCATCATTTC +
Preference number: 2 (lower is better)
Translates to: KYFHTLSAATILILSSQESQGMI*LSQHHF
Trigger: GAAATGATGCTGGCTAAGTCAAATCATTCCTTGAGA...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGGAATTGTATAAAATATaGCCAGGGAACTACACCGTA +
Preference number: 2 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRELYKI*PGNYTV
Trigger: TACGGTGTAGTTCCCTGGTCATATTTTATACAATTC...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTGAATTGTATAAAATATaGCCAGGGAACTACACCGTA +
Preference number: 2 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTELYKI*PGNYTV
Trigger: TACGGTGTAGTTCCCTGGTCATATTTTATACAATTC...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTCTACTGAAATTACAGTaGCACCCTTTTATATGGTTG +
Preference number: 2 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTLLKLQ*HPFIWL
Trigger: CAACCATATAAAAGGGTGTCACTGTAATTTCAGTAG...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAAATTTATACTGTTTCCTaGGGTGATCCAGAAACTACT +
Preference number: 2 (lower is better)
Translates to: PCLANKLIPTITLLSYLKIYTVS*GDPETT
Trigger: AGTAGTTTCTGGATCACCTCAGGAAACAGTATAAAT...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGGAGACAGGACTGAATTaGACATTCTTTAGAAGTAGT +
Preference number: 2 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRETGLN*TFFRSS
Trigger: ACTACTTCTAAAGAATGTTCAATTCAGTCCTGTCTC...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR GCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAATTTCCATACCTTATCTaGAGCCACTATTCTTATCCT +
Preference number: 2 (lower is better)
Translates to: PCLANKLIPTITLLSYLKFPYLI*SHYSYP
Trigger: AGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAA...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR TCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGCTACTGAAATTACAGTaGCACCCTTTTATATGGTTG +
Preference number: 2 (lower is better)
Translates to: KYFHTLSAATILILSSQELLKLQ*HPFIWL
Trigger: CAACCATATAAAAGGGTGTCACTGTAATTTCAGTAG...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR CCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGAGCTACCTAAAAAGGTaGTCTTCACAAGTTTTAAGA +
Preference number: 2 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRSYLKR*SSQVLR
Trigger: TCTTAAAACTTGTGAAGACCACCTTTTTAGGTAGCT...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR GCA 90 bp GAGATATTTGCACATTCTTCACACATGACCGTGCTAGTTAATTCACCAATAAAGACCTTCTTTTCCATATaGAGCACTCTCTTCAATAAA +
Preference number: 2 (lower is better)
Translates to: EIFAHSSHMTVLVNSPIKTFFSI*STLFNK
Trigger: TTTATTGAAGAGAGTGCTGCATATGGAAAAGAAGGT...CTTTATTGGTGAATTAACTAGCACGGTCATGTGTGAAGAATGTGCAAATATCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506871.5
3UTR TCA 72 bp ACTGTCAGTCTCCTTGGTGTACAGCAGTTTACCTGCTaGCAGAGGGTAAAGGGGTCCATCTGGCTGCACACC +
Preference number: 3 (lower is better)
Translates to: TVSLLGVQQFTC*QRVKGSIWLHT
Trigger: GGTGTGCAGCCAGATGGACCCCTTTACCCTCTGTCAGCAGGTAAACTGCTGTACACCAAGGAGACTGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR TCA 72 bp GTCCATCTGGCTGCACACCGGATCCACTACTGGATCTaGACAGCCCAGTCTGCTTTGAAGCACTTTCAGATT +
Preference number: 3 (lower is better)
Translates to: VHLAAHRIHYWI*TAQSALKHFQI
Trigger: AATCTGAAAGTGCTTCAAAGCAGACTGGGCTGTTCAGATCCAGTAGTGGATCCGGTGTGCAGCCAGATGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR GCA 72 bp AGTGGCCTTCTCTCATCGAGCCACTATGTTCCACTATaGCATAGAGACCGTAGAGAACTTTATCTCCCACAC +
Preference number: 3 (lower is better)
Translates to: SGLLSSSHYVPL*HRDRRELYLPH
Trigger: GTGTGGGAGATAAAGTTCTCTACGGTCTCTATGGCATAGTGGAACATAGTGGCTCGATGAGAGAAGGCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR CAA 90 bp TCAAGCCAGCCTGATGAAATCTTTTCAGGTGGAGAATTAGGACAGCTGGAACAGCATCTATATTGGGCCTaGGCCAACCACCTGCAAGTT +
Preference number: 3 (lower is better)
Translates to: SSQPDEIFSGGELGQLEQHLYWA*ANHLQV
Trigger: AACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATG...CTGTTCCAGCTGTCCTAATTCTCCACCTGAAAAGATTTCATCAGGCTGGCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR CAA 90 bp CTAACATGGACCCACTGGCCTGCTGATTCATTATCAGCCGCTTTCAAACCAGGCGGTCTGAAAAGCATTTaGGGGACTATAAGACCTCAA +
Preference number: 3 (lower is better)
Translates to: LTWTHWPADSLSAAFKPGGLKSI*GTIRPQ
Trigger: TTGAGGTCTTATAGTCCCCAAAATGCTTTTCAGACC...GCCTGGTTTGAAAGCGGCTGATAATGAATCAGCAGGCCAGTGGGTCCATGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR CAA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGATGGTTCACTGCACCTaGACCTCCTGGGCTCAAGCA +
Preference number: 3 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRMVHCT*TSWAQA
Trigger: TGCTTGAGCCCAGGAGGTCAAGGTGCAGTGAACCAT...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR CAA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGCATCTATATTGGGCCTaGGCCAACCACCTGCAAGTT +
Preference number: 3 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRHLYWA*ANHLQV
Trigger: AACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATG...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR CAA 90 bp TGGAGGGTGTTCTCACTTTCACATAAGCAGTGTAGTGGCCTTCTCTCATCGAGCCTTGGCAGCTCTAGGTaGATGAATATTTTCTATAGT +
Preference number: 3 (lower is better)
Translates to: WRVFSLSHKQCSGLLSSSLGSSR*MNIFYS
Trigger: ACTATAGAAAATATTCATCAACCTAGAGCTGCCAAG...GCTCGATGAGAGAAGGCCACTACACTGCTTATGTGAAAGTGAGAACACCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR TCA 72 bp TGGCCAACCACCTGCAAGTTATCCTTAACTCCACCATaGAGAGGGTGCAAGAGATATGTTTATGAAATGCCT +
Preference number: 3 (lower is better)
Translates to: WPTTCKLSLTPP*RGCKRYVYEMP
Trigger: AGGCATTTCATAAACATATCTCTTGCACCCTCTTCATGGTGGAGTTAAGGATAACTTGCAGGTGGTTGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR GCA 72 bp TTTCACCGTGGAGATCTTTGTTTCTTCTGTCCTCACTaGATCCAGAAGATAATGAAGAAGCTCCTGACTGTC +
Preference number: 3 (lower is better)
Translates to: FHRGDLCFFCPH*IQKIMKKLLTV
Trigger: GACAGTCAGGAGCTTCTTCATTATCTTCTGGATGCAGTGAGGACAGAAGAAACAAAGATCTCCACGGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR CAA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGCTGTCAGCATCAACATaGCTTTCAGAATGGCTGGCT +
Preference number: 3 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRLSAST*LSEWLA
Trigger: AGCCAGCCATTCTGAAAGCAATGTTGATGCTGACAG...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR CAA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGTCACCGTGGAGATCTTaGTTTCTTCTGTCCTCACTG +
Preference number: 3 (lower is better)
Translates to: KYFHTLSAATILILSSQESPWRS*FLLSSL
Trigger: CAGTGAGGACAGAAGAAACAAAGATCTCCACGGTGA...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR CAA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAACTGCACTATCATTCATaGGCACTAATGATTAGGATG +
Preference number: 3 (lower is better)
Translates to: PCLANKLIPTITLLSYLKLHYHS*ALMIRM
Trigger: CATCCTAATCATTAGTGCCAATGAATGATAGTGCAG...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR CAA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAATGCCTGGCTAACAAATaGATACCAACTATCACTCTT +
Preference number: 3 (lower is better)
Translates to: PCLANKLIPTITLLSYLKCLANK*IPTITL
Trigger: AAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCA...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR CCA 72 bp CCAATTCTAAATGTTATAATCATCTATATTGGGCCTTaGCCAACCACCTGCAAGTTATCCTTAACTCCACCA +
Preference number: 3 (lower is better)
Translates to: PILNVIIIYIGP*PTTCKLSLTPP
Trigger: TGGTGGAGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAACATTTAGAATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR CAA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGAAAGTTCAGGACCATTaGAGGAACATGCTATTCCTA +
Preference number: 3 (lower is better)
Translates to: KYFHTLSAATILILSSQEKVQDH*RNMLFL
Trigger: TAGGAATAGCATGTTCCTCAAATGGTCCTGAACTTT...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR CAA 90 bp TACATGTCTGTTTACTTTACGAAGACTCAAGCCAGCCTGATGAAATCTTTTCAGAAAGTTCAGGACCATTaGAGGAACATGCTATTCCTA +
Preference number: 3 (lower is better)
Translates to: YMSVYFTKTQASLMKSFQKVQDH*RNMLFL
Trigger: TAGGAATAGCATGTTCCTCAAATGGTCCTGAACTTT...CTGAAAAGATTTCATCAGGCTGGCTTGAGTCTTCGTAAAGTAAACAGACATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR-3UTR CAA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTAATTCTGGGAAGTTTTaGTACCCCAGAATAAATACC +
Preference number: 3 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTNSGKF*YPRINT
Trigger: GGTATTTATTCTGGGGTACAAAAACTTCCCAGAATT...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR CAA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAAGCAGCACTGGTAACCTaGATAACATTATATATGCTT +
Preference number: 3 (lower is better)
Translates to: PCLANKLIPTITLLSYLKAALVT*ITLYML
Trigger: AAGCATATATAATGTTATCAAGGTTACCAGTGCTGC...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR CAA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGACCAAGATGGCTGACTaGAATAAAGACAGTCAATAT +
Preference number: 3 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRTKMAD*NKDSQY
Trigger: ATATTGACTGTCTTTATTCAAGTCAGCCATCTTGGT...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR TCA 72 bp AGCCAACATGACAAAACCCTATCTCTTATCTTTAGATaGAGAATGCTTCTTGGCAGCTCTAGGTTGATGAAT +
Preference number: 3 (lower is better)
Translates to: SQHDKTLSLIFR*RMLLGSSRLMN
Trigger: ATTCATCAACCTAGAGCTGCCAAGAAGCATTCTTCATCTAAAGATAAGAGATAGGGTTTTGTCATGTTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506871.5
3UTR-3UTR CAA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGAATTCTGGGAAGTTTTaGTACCCCAGAATAAATACC +
Preference number: 3 (lower is better)
Translates to: KYFHTLSAATILILSSQENSGKF*YPRINT
Trigger: GGTATTTATTCTGGGGTACAAAAACTTCCCAGAATT...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR-3UTR CAA 90 bp ATTTTCTCTGTCAAAATCTTGATCTCCAGTTACAGTGCTGCTCAAACGAAGTTCAATTCTGGGAAGTTTTaGTACCCCAGAATAAATACC +
Preference number: 3 (lower is better)
Translates to: IFSVKILISSYSAAQTKFNSGKF*YPRINT
Trigger: GGTATTTATTCTGGGGTACAAAAACTTCCCAGAATT...GAACTTCGTTTGAGCAGCACTGTAACTGGAGATCAAGATTTTGACAGAGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000496518.6
3UTR TCA 72 bp TCCATTTTAAATGATGTTAAAATAGTGTCAGCACTGTaGCTGACTCATAGCAAGTATGGGTATCTATCCAAA +
Preference number: 3 (lower is better)
Translates to: SILNDVKIVSAL*LTHSKYGYLSK
Trigger: TTTGGATAGATACCCATACTTGCTATGAGTCAGTCACAGTGCTGACACTATTTTAACATCATTTAAAATGGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp ACCAAGGCAGGTAGATCACTTGAGGTCATCAGGAGTTTGAGACCAGCCCAGCCAAAACAGGAACAAGGCTaGGGTCAGTGGTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TKAGRSLEVIRSLRPAQPKQEQG*GQWSRP
Trigger: AGGCCTGGACCACTGACCTCAGCCTTGTTCCTGTTT...TGGCTGGGCTGGTCTCAAACTCCTGATGACCTCAAGTGATCTACCTGCCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506871.5
ENST00000511403.5
CDS-3UTR TCA 90 bp ACCAAGGCAGGTAGATCACTTGAGGTCATCAGGAGTTTGAGACCAGCCCAGCCAAGGTCATCAGGAGTTTaGGACCAGCCCAGCCAACAT +
Preference number: 4 (lower is better)
Translates to: TKAGRSLEVIRSLRPAQPRSSGV*DQPSQH
Trigger: ATGTTGGCTGGGCTGGTCTCAAACTCCTGATGACCT...TGGCTGGGCTGGTCTCAAACTCCTGATGACCTCAAGTGATCTACCTGCCTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496090.6
ENST00000506871.5
ENST00000511403.5
CDS-3UTR CCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGTCTCCCGCAGCCGCATaGACCCGGAGCCGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRSPAAA*TRSRQS
Trigger: GCTCTGCCGGCTCCGGGTCCATGCGGCTGCGGGAGA...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327681.10
CDS-3UTR CCA 90 bp CTAACATGGACCCACTGGCCTGCTGATTCATTATCAGCCGCTTTCAAACCAGGCGTAAAGGGGTCCATCTaGCTGCACACCGGATCCACT +
Preference number: 4 (lower is better)
Translates to: LTWTHWPADSLSAAFKPGVKGSI*LHTGST
Trigger: AGTGGATCCGGTGTGCAGCCAGATGGACCCCTTTAC...GCCTGGTTTGAAAGCGGCTGATAATGAATCAGCAGGCCAGTGGGTCCATGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp ACCAAGGCAGGTAGATCACTTGAGGTCATCAGGAGTTTGAGACCAGCCCAGCCAGTCTCCTTCATGCTGTaGAGAAACAGGAACAAGGCT +
Preference number: 4 (lower is better)
Translates to: TKAGRSLEVIRSLRPAQPVSFML*RNRNKA
Trigger: AGCCTTGTTCCTGTTTCTTCACAGCATGAAGGAGAC...TGGCTGGGCTGGTCTCAAACTCCTGATGACCTCAAGTGATCTACCTGCCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506871.5
ENST00000511403.5
CDS-3UTR GCA 90 bp TTTAGTTCTCTTCATAGTCAGGGCAATAAGAGCAAAGTTACAGTAAAAACGACTTGGGGAGACTGCGCCTaGGCGCTCGTCCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: FSSLHSQGNKSKVTVKTTWGDCA*ALVPLP
Trigger: CGGGAGCGGGACGAGCGCGCAGGCGCAGTCTCCCCA...AGTCGTTTTTACTGTAACTTTGCTCTTATTGCCCTGACTATGAAGAGAACTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329966.10
CDS-3UTR CCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTGGAAGCCGAGTGGGGTaGGGAGCCTCTCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTGSRVG*GASLPA
Trigger: GGCTGGAAGAGAGGCTCCCCACCCCACTCGGCTTCC...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327681.10
CDS-3UTR TCA 90 bp ACCAAGGCAGGTAGATCACTTGAGGTCATCAGGAGTTTGAGACCAGCCCAGCCACCACTGTATCGATCATaGTCTGTCTCCCGTAAACTT +
Preference number: 4 (lower is better)
Translates to: TKAGRSLEVIRSLRPAQPPLYRS*SVSRKL
Trigger: AAGTTTACGGGAGACAGATCATGATCGATACAGTGG...TGGCTGGGCTGGTCTCAAACTCCTGATGACCTCAAGTGATCTACCTGCCTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496090.6
ENST00000506871.5
ENST00000511403.5
CDS-3UTR TCA 90 bp CCGGATCCACTACTGGATCTGAACAGCCCAGTCTGCTTTGAAGCACTTTCAGATATCCACTACTGGATCTaGACAGCCCAGTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: PDPLLDLNSPVCFEALSDIHYWI*TAQSAL
Trigger: CAAAGCAGACTGGGCTGTTCAGATCCAGTAGTGGAT...ATCTGAAAGTGCTTCAAAGCAGACTGGGCTGTTCAGATCCAGTAGTGGATCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp CTAACATGGACCCACTGGCCTGCTGATTCATTATCAGCCGCTTTCAAACCAGGCCTGGAACAGCAGAAATaGGCAATTGCTTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: LTWTHWPADSLSAAFKPGLEQQK*AIASWH
Trigger: ATGCCAGGAAGCAATTGCTCATTTCTGCTGTTCCAG...GCCTGGTTTGAAAGCGGCTGATAATGAATCAGCAGGCCAGTGGGTCCATGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR GCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGAGGGGTCCATCTGGCTaGACACCGGATCCACTACTG +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERRGPSG*TPDPLL
Trigger: CAGTAGTGGATCCGGTGTGCAGCCAGATGGACCCCT...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp CTAACATGGACCCACTGGCCTGCTGATTCATTATCAGCCGCTTTCAAACCAGGCCACTGTCAGTCTCCTTaGTGTACAGCAGTTTACCTG +
Preference number: 4 (lower is better)
Translates to: LTWTHWPADSLSAAFKPGHCQSP*CTAVYL
Trigger: CAGGTAAACTGCTGTACACCAAGGAGACTGACAGTG...GCCTGGTTTGAAAGCGGCTGATAATGAATCAGCAGGCCAGTGGGTCCATGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGCAGTGGTCCAGGCCTTaGAAGTTCCACCACCAATGG +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERQWSRP*KFHHQW
Trigger: CCATTGGTGGTGGAACTTTCAAGGCCTGGACCACTG...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000500704.7
CDS-3UTR TCA 90 bp GGATCTTTCACCGTGGAGATATTTGCACATTCTTCACACATGACCGTGCTAGTTCAGTGGTCCAGGCCTTaGAAGTTCCACCACCAATGG +
Preference number: 4 (lower is better)
Translates to: GSFTVEIFAHSSHMTVLVQWSRP*KFHHQW
Trigger: CCATTGGTGGTGGAACTTTCAAGGCCTGGACCACTG...AACTAGCACGGTCATGTGTGAAGAATGTGCAAATATCTCCACGGTGAAAGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR TCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGAAACAGGAACAAGGCTaGGGTCAGTGGTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERKQEQG*GQWSRP
Trigger: AGGCCTGGACCACTGACCTCAGCCTTGTTCCTGTTT...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TGGAGGGTGTTCTCACTTTCACATAAGCAGTGTAGTGGCCTTCTCTCATCGAGCAGCACTTTCAGATTCTaGAGGCTCACTGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: WRVFSLSHKQCSGLLSSSSTFRF*RLTVSI
Trigger: GATGCTGACAGTGAGCCTTCAGAATCTGAAAGTGCT...GCTCGATGAGAGAAGGCCACTACACTGCTTATGTGAAAGTGAGAACACCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR GCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGCGAAGACCGAGAAACTaGGGCGACCATACCGCCGCT +
Preference number: 4 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRRRPRN*GDHTAA
Trigger: AGCGGCGGTATGGTCGCCGCAGTTTCTCGGTCTTCG...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327681.10
CDS-3UTR GCA 90 bp ACCAAGGCAGGTAGATCACTTGAGGTCATCAGGAGTTTGAGACCAGCCCAGCCACACCGTGGAGATATTTaGACATTCTTCACACATGAC +
Preference number: 4 (lower is better)
Translates to: TKAGRSLEVIRSLRPAQPHRGDI*TFFTHD
Trigger: GTCATGTGTGAAGAATGTGCAAATATCTCCACGGTG...TGGCTGGGCTGGTCTCAAACTCCTGATGACCTCAAGTGATCTACCTGCCTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496090.6
ENST00000506871.5
CDS-3UTR GCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGGGTCCATCTGGCTaGACACCGGATCCACTACTG +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLERGPSG*TPDPLL
Trigger: CAGTAGTGGATCCGGTGTGCAGCCAGATGGACCCCT...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp CCGGATCCACTACTGGATCTGAACAGCCCAGTCTGCTTTGAAGCACTTTCAGATCCTTGGCCAACCACCTaGAAGTTATCCTTAACTCCA +
Preference number: 4 (lower is better)
Translates to: PDPLLDLNSPVCFEALSDPWPTT*KLSLTP
Trigger: TGGAGTTAAGGATAACTTGCAGGTGGTTGGCCAAGG...ATCTGAAAGTGCTTCAAAGCAGACTGGGCTGTTCAGATCCAGTAGTGGATCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR CCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGGATCAGGAAGCCGAGTaGGGTGGGGAGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRDQEAE*GGEPLF
Trigger: GAAGAGAGGCTCCCCACCCCACTCGGCTTCCTGATC...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327681.10
CDS-3UTR CCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGGTAAAGGGGTCCATCTaGCTGCACACCGGATCCACT +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERVKGSI*LHTGST
Trigger: AGTGGATCCGGTGTGCAGCCAGATGGACCCCTTTAC...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGTGCACCTTGACCTCCTaGGCTCAAGCATCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERCTLTS*AQASSP
Trigger: TGGGGAAGATGCTTGAGCCCAGGAGGTCAAGGTGCA...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp TGGAGGGTGTTCTCACTTTCACATAAGCAGTGTAGTGGCCTTCTCTCATCGAGCTCTGCAGGAATGCAGTaGTGTGATCATGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: WRVFSLSHKQCSGLLSSSSAGMQ*CDHGSL
Trigger: CAGTGAACCATGATCACACCACTGCATTCCTGCAGA...GCTCGATGAGAGAAGGCCACTACACTGCTTATGTGAAAGTGAGAACACCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGAGAAATGCGCCGCGATaGGGCGGACGGAAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQERNAPR*GGRKGV
Trigger: CACACCTTTCCGTCCGCCTCATCGCGGCGCATTTCT...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327681.10
CDS-3UTR TCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAACACACCCCGAGGATGTaGAGAGAAATGCGCCGCGAT +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKHTPRM*REMRRD
Trigger: ATCGCGGCGCATTTCTCTTCACATCCTCGGGGTGTG...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327681.10
CDS-3UTR TCA 90 bp ACCAAGGCAGGTAGATCACTTGAGGTCATCAGGAGTTTGAGACCAGCCCAGCCAGAAGTGAAATATCAATaGATGGATCTTTCACCGTGG +
Preference number: 4 (lower is better)
Translates to: TKAGRSLEVIRSLRPAQPEVKYQ*MDLSPW
Trigger: CCACGGTGAAAGATCCATTCATTGATATTTCACTTC...TGGCTGGGCTGGTCTCAAACTCCTGATGACCTCAAGTGATCTACCTGCCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496090.6
ENST00000506871.5
ENST00000511403.5
CDS-3UTR TCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAACAGCAGTTTACCTGCTaGCAGAGGGTAAAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEQQFTC*QRVKGS
Trigger: GGACCCCTTTACCCTCTGTCAGCAGGTAAACTGCTG...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGGACCCACTGGCCTGCTaGTTCATTATCAGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERDPLAC*FIISRF
Trigger: AAAGCGGCTGATAATGAATCAGCAGGCCAGTGGGTC...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp ACCAAGGCAGGTAGATCACTTGAGGTCATCAGGAGTTTGAGACCAGCCCAGCCATCTCTTATCTTTAGATaGAGAATGCTTCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TKAGRSLEVIRSLRPAQPSLIFR*RMLLGS
Trigger: GCTGCCAAGAAGCATTCTTCATCTAAAGATAAGAGA...TGGCTGGGCTGGTCTCAAACTCCTGATGACCTCAAGTGATCTACCTGCCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496090.6
ENST00000506871.5
ENST00000511403.5
CDS-3UTR GCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAAGGATGTGAAGAGAAATaGGCCGCGATGAGGCGGACG +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKGCEEK*AAMRRT
Trigger: CGTCCGCCTCATCGCGGCGCATTTCTCTTCACATCC...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327681.10
CDS-3UTR GCA 90 bp ACCAAGGCAGGTAGATCACTTGAGGTCATCAGGAGTTTGAGACCAGCCCAGCCATTTCAGTCTCCTTCATaGTGTGAAGAAACAGGAACA +
Preference number: 4 (lower is better)
Translates to: TKAGRSLEVIRSLRPAQPFQSPS*CEETGT
Trigger: TGTTCCTGTTTCTTCACAGCATGAAGGAGACTGAAA...TGGCTGGGCTGGTCTCAAACTCCTGATGACCTCAAGTGATCTACCTGCCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506871.5
ENST00000511403.5
CDS-3UTR GCA 90 bp ACCAAGGCAGGTAGATCACTTGAGGTCATCAGGAGTTTGAGACCAGCCCAGCCATTCTTCTGTCCTCACTaGATCCAGAAGATAATGAAG +
Preference number: 4 (lower is better)
Translates to: TKAGRSLEVIRSLRPAQPFFCPH*IQKIMK
Trigger: CTTCATTATCTTCTGGATGCAGTGAGGACAGAAGAA...TGGCTGGGCTGGTCTCAAACTCCTGATGACCTCAAGTGATCTACCTGCCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496090.6
ENST00000506871.5
ENST00000511403.5
CDS-3UTR GCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTAGGGGTCCATCTGGCTaGACACCGGATCCACTACTG +
Preference number: 4 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTRGPSG*TPDPLL
Trigger: CAGTAGTGGATCCGGTGTGCAGCCAGATGGACCCCT...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp CTTCATAGTCAGGGCAATAAGAGCAAAGTTACAGTAAAAACGACTATTCATGTTGGAAGCCGAGTGGGGTaGGGAGCCTCTCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LHSQGNKSKVTVKTTIHVGSRVG*GASLPA
Trigger: GGCTGGAAGAGAGGCTCCCCACCCCACTCGGCTTCC...AACATGAATAGTCGTTTTTACTGTAACTTTGCTCTTATTGCCCTGACTATGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472914.6
CDS-3UTR CCA 90 bp CTTCATAGTCAGGGCAATAAGAGCAAAGTTACAGTAAAAACGACTATTCATGTTGCAGCGTCTACAACCTaGGGAGACTGCGCCTGCGCG +
Preference number: 4 (lower is better)
Translates to: LHSQGNKSKVTVKTTIHVAASTT*GDCACA
Trigger: CGCGCAGGCGCAGTCTCCCCAGGTTGTAGACGCTGC...AACATGAATAGTCGTTTTTACTGTAACTTTGCTCTTATTGCCCTGACTATGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329966.10
CDS-3UTR CCA 90 bp ACCAAGGCAGGTAGATCACTTGAGGTCATCAGGAGTTTGAGACCAGCCCAGCCAATGGATCTTTCACCGTaGAGATCTTTGTTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: TKAGRSLEVIRSLRPAQPMDLSP*RSLFLL
Trigger: CAGAAGAAACAAAGATCTCCACGGTGAAAGATCCAT...TGGCTGGGCTGGTCTCAAACTCCTGATGACCTCAAGTGATCTACCTGCCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511403.5
CDS-3UTR TCA 90 bp GAGCCATTTAATTTCTGTGTCTCCATTTCCTTATATATGAGGATAAGCTGCTTCAGAAATGCGCCGCGATaGGGCGGACGGAAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: EPFNFCVSISLYMRISCFRNAPR*GGRKGV
Trigger: CACACCTTTCCGTCCGCCTCATCGCGGCGCATTTCT...GAAGCAGCTTATCCTCATATATAAGGAAATGGAGACACAGAAATTAAATGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472914.6
CDS-3UTR TCA 90 bp TGGAGGGTGTTCTCACTTTCACATAAGCAGTGTAGTGGCCTTCTCTCATCGAGCTTCACGCTGATAGCATaGCTTACATGTTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: WRVFSLSHKQCSGLLSSSFTLIA*LTCWQV
Trigger: AACTTGCCAACATGTAAGTCATGCTATCAGCGTGAA...GCTCGATGAGAGAAGGCCACTACACTGCTTATGTGAAAGTGAGAACACCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGACCAATGGGTCCAGCTaGGAGTCTGAGGAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERTNGSS*ESEEGK
Trigger: TTTTCCTTCCTCAGACTCTCAGCTGGACCCATTGGT...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGCAGTGGTCCAGGCCTTaGAAGTTCCACCACCAATGG +
Preference number: 4 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRQWSRP*KFHHQW
Trigger: CCATTGGTGGTGGAACTTTCAAGGCCTGGACCACTG...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327681.10
ENST00000500704.7
CDS-3UTR TCA 90 bp TACAACATAGGCATCCAAGTCAGGACAGATCTCCATTTGATTCTCAGCTTTTCAAAACAGGAACAAGGCTaGGGTCAGTGGTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: YNIGIQVRTDLHLILSFSKQEQG*GQWSRP
Trigger: AGGCCTGGACCACTGACCTCAGCCTTGTTCCTGTTT...TGAAAAGCTGAGAATCAAATGGAGATCTGTCCTGACTTGGATGCCTATGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329966.10
CDS-3UTR TCA 90 bp CTAACATGGACCCACTGGCCTGCTGATTCATTATCAGCCGCTTTCAAACCAGGCACTCTTATCTTTAGATaGAGAATGCTTCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LTWTHWPADSLSAAFKPGTLIFR*RMLLGS
Trigger: GCTGCCAAGAAGCATTCTTCATCTAAAGATAAGAGT...GCCTGGTTTGAAAGCGGCTGATAATGAATCAGCAGGCCAGTGGGTCCATGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGATCCACTACTGGATCTaGACAGCCCAGTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERIHYWI*TAQSAL
Trigger: CAAAGCAGACTGGGCTGTTCAGATCCAGTAGTGGAT...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGCAGCAGTTTACCTGCTaGCAGAGGGTAAAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRQQFTC*QRVKGS
Trigger: GGACCCCTTTACCCTCTGTCAGCAGGTAAACTGCTG...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp GTCTGTTTACTTTACGAAGACTCAAGCCAGCCTGATGAAATCTTTTCAGGTGGAGACCCACTGGCCTGCTaGTTCATTATCAGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: VCLLYEDSSQPDEIFSGGDPLAC*FIISRF
Trigger: AAAGCGGCTGATAATGAATCAGCAGGCCAGTGGGTC...TCCACCTGAAAAGATTTCATCAGGCTGGCTTGAGTCTTCGTAAAGTAAACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp TGGAGGGTGTTCTCACTTTCACATAAGCAGTGTAGTGGCCTTCTCTCATCGAGCATAGTGTCAGCACTGTaGCTGACTCATAGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: WRVFSLSHKQCSGLLSSSIVSAL*LTHSKY
Trigger: ATACTTGCTATGAGTCAGTCACAGTGCTGACACTAT...GCTCGATGAGAGAAGGCCACTACACTGCTTATGTGAAAGTGAGAACACCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp CCATATGCAGCACTCTCTTCAATAAACGGTTTATTTGCAGGAGTCTTTGGAGCAAGGTCATCAGGAGTTTaGGACCAGCCCAGCCAACAT +
Preference number: 4 (lower is better)
Translates to: PYAALSSINGLFAGVFGARSSGV*DQPSQH
Trigger: ATGTTGGCTGGGCTGGTCTCAAACTCCTGATGACCT...TGCTCCAAAGACTCCTGCAAATAAACCGTTTATTGAAGAGAGTGCTGCATATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR GCA 90 bp TGGAGGGTGTTCTCACTTTCACATAAGCAGTGTAGTGGCCTTCTCTCATCGAGCCATTTACCTGGCACTTaGCTGCACTATCATTCATTG +
Preference number: 4 (lower is better)
Translates to: WRVFSLSHKQCSGLLSSSHLPGT*LHYHSL
Trigger: CAATGAATGATAGTGCAGGCAAGTGCCAGGTAAATG...GCTCGATGAGAGAAGGCCACTACACTGCTTATGTGAAAGTGAGAACACCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR CCA 90 bp CCGGATCCACTACTGGATCTGAACAGCCCAGTCTGCTTTGAAGCACTTTCAGATGTTCCGATAATTTCCTaGAGGGTGTTCTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: PDPLLDLNSPVCFEALSDVPIIS*RVFSLS
Trigger: TGAAAGTGAGAACACCCTCCAGGAAATTATCGGAAC...ATCTGAAAGTGCTTCAAAGCAGACTGGGCTGTTCAGATCCAGTAGTGGATCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGAAACAGGAACAAGGCTaGGGTCAGTGGTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQEKQEQG*GQWSRP
Trigger: AGGCCTGGACCACTGACCTCAGCCTTGTTCCTGTTT...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327681.10
ENST00000500704.7
CDS-3UTR TCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGGTCTCCTTCATGCTGTaGAGAAACAGGAACAAGGCT +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERVSFML*RNRNKA
Trigger: AGCCTTGTTCCTGTTTCTTCACAGCATGAAGGAGAC...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGAGCACTTTCAGATTCTaGAGGCTCACTGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERSTFRF*RLTVSI
Trigger: GATGCTGACAGTGAGCCTTCAGAATCTGAAAGTGCT...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAATCCACTACTGGATCTaGACAGCCCAGTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEIHYWI*TAQSAL
Trigger: CAAAGCAGACTGGGCTGTTCAGATCCAGTAGTGGAT...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGGACCCACTGGCCTGCTaGTTCATTATCAGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRDPLAC*FIISRF
Trigger: AAAGCGGCTGATAATGAATCAGCAGGCCAGTGGGTC...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TGGAGGGTGTTCTCACTTTCACATAAGCAGTGTAGTGGCCTTCTCTCATCGAGCACCACTAGATGGCCCTaGGATGATTTTAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: WRVFSLSHKQCSGLLSSSTTRWP*DDFKLS
Trigger: ACTTAACTTAAAATCATCTCAGGGCCATCTAGTGGT...GCTCGATGAGAGAAGGCCACTACACTGCTTATGTGAAAGTGAGAACACCCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR GCA 90 bp TTTAGTTCTCTTCATAGTCAGGGCAATAAGAGCAAAGTTACAGTAAAAACGACTCGAAGACCGAGAAACTaGGGCGACCATACCGCCGCT +
Preference number: 4 (lower is better)
Translates to: FSSLHSQGNKSKVTVKTTRRPRN*GDHTAA
Trigger: AGCGGCGGTATGGTCGCCGCAGTTTCTCGGTCTTCG...AGTCGTTTTTACTGTAACTTTGCTCTTATTGCCCTGACTATGAAGAGAACTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472914.6
CDS-3UTR GCA 90 bp GAGCCATTTAATTTCTGTGTCTCCATTTCCTTATATATGAGGATAAGCTGCTTCGGATGTGAAGAGAAATaGGCCGCGATGAGGCGGACG +
Preference number: 4 (lower is better)
Translates to: EPFNFCVSISLYMRISCFGCEEK*AAMRRT
Trigger: CGTCCGCCTCATCGCGGCGCATTTCTCTTCACATCC...GAAGCAGCTTATCCTCATATATAAGGAAATGGAGACACAGAAATTAAATGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472914.6
CDS-3UTR CCA 90 bp TTTAGTTCTCTTCATAGTCAGGGCAATAAGAGCAAAGTTACAGTAAAAACGACTGATCAGGAAGCCGAGTaGGGTGGGGAGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: FSSLHSQGNKSKVTVKTTDQEAE*GGEPLF
Trigger: GAAGAGAGGCTCCCCACCCCACTCGGCTTCCTGATC...AGTCGTTTTTACTGTAACTTTGCTCTTATTGCCCTGACTATGAAGAGAACTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472914.6
CDS-3UTR CCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAAAAAGCCAGTAAGCGGTaGATGGAGATGCGGACCCAA +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKKASKR*MEMRTQ
Trigger: TTGGGTCCGCATCTCCATCCACCGCTTACTGGCTTT...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000327681.10
CDS-3UTR CCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGTTTTTACCACATCCCTaGAAGCCACACTTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERFLPHP*KPHLRH
Trigger: GTGCCTCAAGTGTGGCTTCCAGGGATGTGGTAAAAA...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGTGCACCTTGACCTCCTaGGCTCAAGCATCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQECTLTS*AQASSP
Trigger: TGGGGAAGATGCTTGAGCCCAGGAGGTCAAGGTGCA...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp CTTCATAGTCAGGGCAATAAGAGCAAAGTTACAGTAAAAACGACTATTCATGTTCACACCCCGAGGATGTaGAGAGAAATGCGCCGCGAT +
Preference number: 4 (lower is better)
Translates to: LHSQGNKSKVTVKTTIHVHTPRM*REMRRD
Trigger: ATCGCGGCGCATTTCTCTTCACATCCTCGGGGTGTG...AACATGAATAGTCGTTTTTACTGTAACTTTGCTCTTATTGCCCTGACTATGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472914.6
CDS-3UTR TCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAAACCAATGGGTCCAGCTaGGAGTCTGAGGAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKTNGSS*ESEEGK
Trigger: TTTTCCTTCCTCAGACTCTCAGCTGGACCCATTGGT...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327681.10
ENST00000500704.7
CDS-3UTR TCA 90 bp TATGGTTTTCTCACTTTATGGTATTACAACATAGGCATCCAAGTCAGGACAGATCAGTGGTCCAGGCCTTaGAAGTTCCACCACCAATGG +
Preference number: 4 (lower is better)
Translates to: YGFLTLWYYNIGIQVRTDQWSRP*KFHHQW
Trigger: CCATTGGTGGTGGAACTTTCAAGGCCTGGACCACTG...ATCTGTCCTGACTTGGATGCCTATGTTGTAATACCATAAAGTGAGAAAACCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329966.10
CDS-3UTR TCA 90 bp TGCCACTGTATCGATCATGATCTGTCTCCCGTAAACTTCTATATTTATTCATTCCAGTGGTCCAGGCCTTaGAAGTTCCACCACCAATGG +
Preference number: 4 (lower is better)
Translates to: CHCIDHDLSPVNFYIYSFQWSRP*KFHHQW
Trigger: CCATTGGTGGTGGAACTTTCAAGGCCTGGACCACTG...GAATGAATAAATATAGAAGTTTACGGGAGACAGATCATGATCGATACAGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506871.5
ENST00000507717.5
CDS-3UTR TCA 90 bp GAGCCATTTAATTTCTGTGTCTCCATTTCCTTATATATGAGGATAAGCTGCTTCAAACAGGAACAAGGCTaGGGTCAGTGGTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: EPFNFCVSISLYMRISCFKQEQG*GQWSRP
Trigger: AGGCCTGGACCACTGACCTCAGCCTTGTTCCTGTTT...GAAGCAGCTTATCCTCATATATAAGGAAATGGAGACACAGAAATTAAATGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329966.10
ENST00000472914.6
CDS-3UTR TCA 90 bp GAAATATCAATGAATGGATCTTTCACCGTGGAGATATTTGCACATTCTTCACACAAACAGGAACAAGGCTaGGGTCAGTGGTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: EISMNGSFTVEIFAHSSHKQEQG*GQWSRP
Trigger: AGGCCTGGACCACTGACCTCAGCCTTGTTCCTGTTT...GTGTGAAGAATGTGCAAATATCTCCACGGTGAAAGATCCATTCATTGATATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR TCA 90 bp TGCCACTGTATCGATCATGATCTGTCTCCCGTAAACTTCTATATTTATTCATTCAAACAGGAACAAGGCTaGGGTCAGTGGTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: CHCIDHDLSPVNFYIYSFKQEQG*GQWSRP
Trigger: AGGCCTGGACCACTGACCTCAGCCTTGTTCCTGTTT...GAATGAATAAATATAGAAGTTTACGGGAGACAGATCATGATCGATACAGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506871.5
ENST00000507717.5
CDS-3UTR TCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAGTCTCCTTCATGCTGTaGAGAAACAGGAACAAGGCT +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEVSFML*RNRNKA
Trigger: AGCCTTGTTCCTGTTTCTTCACAGCATGAAGGAGAC...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000500704.7
CDS-3UTR TCA 90 bp CCATATGCAGCACTCTCTTCAATAAACGGTTTATTTGCAGGAGTCTTTGGAGCAGTCTCCTTCATGCTGTaGAGAAACAGGAACAAGGCT +
Preference number: 4 (lower is better)
Translates to: PYAALSSINGLFAGVFGAVSFML*RNRNKA
Trigger: AGCCTTGTTCCTGTTTCTTCACAGCATGAAGGAGAC...TGCTCCAAAGACTCCTGCAAATAAACCGTTTATTGAAGAGAGTGCTGCATATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR TCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGGCTTTCATTCAGACGTaGCTCAGAATTCATGAGGCT +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERAFIQT*LRIHEA
Trigger: AGCCTCATGAATTCTGAGTCACGTCTGAATGAAAGC...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGCACTTTCAGATTCTaGAGGCTCACTGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLESTFRF*RLTVSI
Trigger: GATGCTGACAGTGAGCCTTCAGAATCTGAAAGTGCT...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAAATCCACTACTGGATCTaGACAGCCCAGTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKIHYWI*TAQSAL
Trigger: CAAAGCAGACTGGGCTGTTCAGATCCAGTAGTGGAT...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp ATGCTTCTTGGCAGCTCTAGGTTGATGAATATTTTCTATAGTAACATTGCCACTCAGCAGTTTACCTGCTaGCAGAGGGTAAAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: MLLGSSRLMNIFYSNIATQQFTC*QRVKGS
Trigger: GGACCCCTTTACCCTCTGTCAGCAGGTAAACTGCTG...AGTGGCAATGTTACTATAGAAAATATTCATCAACCTAGAGCTGCCAAGAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAACTGGAACAGCAGAAATaGGCAATTGCTTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLELEQQK*AIASWH
Trigger: ATGCCAGGAAGCAATTGCTCATTTCTGCTGTTCCAG...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAATTCCCAGGAGGAGAATaGAGTGGGACTAGGCATTTA +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEFPGGE*SGTRHL
Trigger: TAAATGCCTAGTCCCACTTCATTCTCCTCCTGGGAA...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGCTGAACAGCCCAGTCTaGTTTGAAGCACTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERLNSPV*FEALSD
Trigger: ATCTGAAAGTGCTTCAAAGCAGACTGGGCTGTTCAG...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp TGGAGGGTGTTCTCACTTTCACATAAGCAGTGTAGTGGCCTTCTCTCATCGAGCTTCAGAAATAGCTTCTaGCATTTCCTTATCACCACT +
Preference number: 4 (lower is better)
Translates to: WRVFSLSHKQCSGLLSSSFRNSF*HFLITT
Trigger: AGTGGTGATAAGGAAATGGCAGAAGCTATTTCTGAA...GCTCGATGAGAGAAGGCCACTACACTGCTTATGTGAAAGTGAGAACACCCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR GCA 90 bp GTCTGTTTACTTTACGAAGACTCAAGCCAGCCTGATGAAATCTTTTCAGGTGGATACCTGGCACTTGCCTaGACTATCATTCATTGGCAC +
Preference number: 4 (lower is better)
Translates to: VCLLYEDSSQPDEIFSGGYLALA*TIIHWH
Trigger: GTGCCAATGAATGATAGTGCAGGCAAGTGCCAGGTA...TCCACCTGAAAAGATTTCATCAGGCTGGCTTGAGTCTTCGTAAAGTAAACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR GCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGCAGCATGAGCCACCATaGCTGGCTAACAAATTGATA +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERQHEPP*LANKLI
Trigger: TATCAATTTGTTAGCCAGGCATGGTGGCTCATGCTG...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAATTTTTACCACATCCCTaGAAGCCACACTTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEFLPHP*KPHLRH
Trigger: GTGCCTCAAGTGTGGCTTCCAGGGATGTGGTAAAAA...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAACACTGTCAGTCTCCTTaGTGTACAGCAGTTTACCTG +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEHCQSP*CTAVYL
Trigger: CAGGTAAACTGCTGTACACCAAGGAGACTGACAGTG...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGCTAACATGGACCCACTaGCCTGCTGATTCATTATCA +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERLTWTH*PADSLS
Trigger: TGATAATGAATCAGCAGGCCAGTGGGTCCATGTTAG...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGATCTATATTGGGCCTTaGCCAACCACCTGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERIYIGP*PTTCKL
Trigger: TAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGAT...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp TGCCACTGTATCGATCATGATCTGTCTCCCGTAAACTTCTATATTTATTCATTCTGCACCTTGACCTCCTaGGCTCAAGCATCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: CHCIDHDLSPVNFYIYSFCTLTS*AQASSP
Trigger: TGGGGAAGATGCTTGAGCCCAGGAGGTCAAGGTGCA...GAATGAATAAATATAGAAGTTTACGGGAGACAGATCATGATCGATACAGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR CCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAATCTGCAGGAATGCAGTaGTGTGATCATGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLESAGMQ*CDHGSL
Trigger: CAGTGAACCATGATCACACCACTGCATTCCTGCAGA...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR CAA 72 bp AGGCATTTACCTGGCACTTGCCTGCACTATCATTCATaGGCACTAATGATTAGGATGCTTGAACCATGCAGT +
Preference number: 4 (lower is better)
Translates to: RHLPGTCLHYHS*ALMIRMLEPCS
Trigger: ACTGCATGGTTCAAGCATCCTAATCATTAGTGCCAATGAATGATAGTGCAGGCAAGTGCCAGGTAAATGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR CAA 72 bp TACAACATAGGCATCCAAGTCAGGACAGATCTCCATTaGATTCTCAGCTTTTCACTCAGACTAGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: YNIGIQVRTDLH*ILSFSLRLGEP
Trigger: TGGCTCACCTAGTCTGAGTGAAAAGCTGAGAATCAAATGGAGATCTGTCCTGACTTGGATGCCTATGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329966.10
CDS-3UTR TCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGGAAAGAGAAGTGAAGTaGCTTGCAGAGGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: NISIPYLQPLFLSFLPRREREVK*LAEVPK
Trigger: CTTTGGGACCTCTGCAAGTCACTTCACTTCTCTTTC...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327681.10
CDS-3UTR TCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGTTCACGCTGATAGCATaGCTTACATGTTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERFTLIA*LTCWQV
Trigger: AACTTGCCAACATGTAAGTCATGCTATCAGCGTGAA...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGACCAATGGGTCCAGCTaGGAGTCTGAGGAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQETNGSS*ESEEGK
Trigger: TTTTCCTTCCTCAGACTCTCAGCTGGACCCATTGGT...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327681.10
ENST00000500704.7
CDS-3UTR TCA 90 bp CTTCATAGTCAGGGCAATAAGAGCAAAGTTACAGTAAAAACGACTATTCATGTTCAGTGGTCCAGGCCTTaGAAGTTCCACCACCAATGG +
Preference number: 4 (lower is better)
Translates to: LHSQGNKSKVTVKTTIHVQWSRP*KFHHQW
Trigger: CCATTGGTGGTGGAACTTTCAAGGCCTGGACCACTG...AACATGAATAGTCGTTTTTACTGTAACTTTGCTCTTATTGCCCTGACTATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329966.10
ENST00000472914.6
CDS-3UTR TCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAACCACTGTATCGATCATaGTCTGTCTCCCGTAAACTT +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEPLYRS*SVSRKL
Trigger: AAGTTTACGGGAGACAGATCATGATCGATACAGTGG...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGGTGACTCAGAATTCATaGGGCTGGCAAACATTAAAG +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERVTQNS*GWQTLK
Trigger: CTTTAATGTTTGCCAGCCTCATGAATTCTGAGTCAC...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGAGCACTTTCAGATTCTaGAGGCTCACTGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRSTFRF*RLTVSI
Trigger: GATGCTGACAGTGAGCCTTCAGAATCTGAAAGTGCT...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTCTGGAACAGCAGAAATaGGCAATTGCTTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTLEQQK*AIASWH
Trigger: ATGCCAGGAAGCAATTGCTCATTTCTGCTGTTCCAG...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAACTGGAACAGCAGAAATaGGCAATTGCTTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKLEQQK*AIASWH
Trigger: ATGCCAGGAAGCAATTGCTCATTTCTGCTGTTCCAG...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGAAGTTCAGGACCATTTaGGGAACATGCTATTCCTAC +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERKFRTI*GTCYSY
Trigger: GTAGGAATAGCATGTTCCTCAAATGGTCCTGAACTT...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGGTAAACCCACACTACTaGAATTACAGTGACACCCTT +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERVNPHY*NYSDTL
Trigger: AAGGGTGTCACTGTAATTTCAGTAGTGTGGGTTTAC...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGTTCCCAGGAGGAGAATaGAGTGGGACTAGGCATTTA +
Preference number: 4 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRFPGGE*SGTRHL
Trigger: TAAATGCCTAGTCCCACTTCATTCTCCTCCTGGGAA...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGGAAACAAGAAACAAGTaGCCATCCGATGAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERETRNK*PSDEKC
Trigger: GCACTTTTCATCGGATGGTCACTTGTTTCTTGTTTC...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAATGTCAGCACTGTGACTaGCTCATAGCAAGTATGGGT +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKCQHCD*LIASMG
Trigger: ACCCATACTTGCTATGAGTCAGTCACAGTGCTGACA...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGAAGAGTATAAGTCTGTaGCAAGTTCTGCATGACTGC +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERKSISL*QVLHDC
Trigger: GCAGTCATGCAGAACTTGGCACAGACTTATACTCTT...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp GGATCTTTCACCGTGGAGATATTTGCACATTCTTCACACATGACCGTGCTAGTTCACCGTGGAGATATTTaGACATTCTTCACACATGAC +
Preference number: 4 (lower is better)
Translates to: GSFTVEIFAHSSHMTVLVHRGDI*TFFTHD
Trigger: GTCATGTGTGAAGAATGTGCAAATATCTCCACGGTG...AACTAGCACGGTCATGTGTGAAGAATGTGCAAATATCTCCACGGTGAAAGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR GCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAACTGAACAGCCCAGTCTaGTTTGAAGCACTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLELNSPV*FEALSD
Trigger: ATCTGAAAGTGCTTCAAAGCAGACTGGGCTGTTCAG...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAGATCTCCAGTTACAGTaGTGCTCAAACGAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEDLQLQ*CSNEVQ
Trigger: CTGAACTTCGTTTGAGCAGCACTGTAACTGGAGATC...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp GTCTGTTTACTTTACGAAGACTCAAGCCAGCCTGATGAAATCTTTTCAGGTGGAGATCTCCAGTTACAGTaGTGCTCAAACGAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: VCLLYEDSSQPDEIFSGGDLQLQ*CSNEVQ
Trigger: CTGAACTTCGTTTGAGCAGCACTGTAACTGGAGATC...TCCACCTGAAAAGATTTCATCAGGCTGGCTTGAGTCTTCGTAAAGTAAACAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR GCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAACCTTGGCCAACCACCTaGAAGTTATCCTTAACTCCA +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKPWPTT*KLSLTP
Trigger: TGGAGTTAAGGATAACTTGCAGGTGGTTGGCCAAGG...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGCATTTACCTGGCACTTaGCTGCACTATCATTCATTG +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERHLPGT*LHYHSL
Trigger: CAATGAATGATAGTGCAGGCAAGTGCCAGGTAAATG...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGCCATCCGATGAAAAGTaGATGCCTCTTAACAGTATC +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERPSDEK*MPLNSI
Trigger: GATACTGTTAAGAGGCATGCACTTTTCATCGGATGG...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp GAGCCATTTAATTTCTGTGTCTCCATTTCCTTATATATGAGGATAAGCTGCTTCAAAGCCAGTAAGCGGTaGATGGAGATGCGGACCCAA +
Preference number: 4 (lower is better)
Translates to: EPFNFCVSISLYMRISCFKASKR*MEMRTQ
Trigger: TTGGGTCCGCATCTCCATCCACCGCTTACTGGCTTT...GAAGCAGCTTATCCTCATATATAAGGAAATGGAGACACAGAAATTAAATGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472914.6
CDS-3UTR CCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAACACTGTCAGTCTCCTTaGTGTACAGCAGTTTACCTG +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKHCQSP*CTAVYL
Trigger: CAGGTAAACTGCTGTACACCAAGGAGACTGACAGTG...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGGTTCCGATAATTTCCTaGAGGGTGTTCTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERVPIIS*RVFSLS
Trigger: TGAAAGTGAGAACACCCTCCAGGAAATTATCGGAAC...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAACTAACATGGACCCACTaGCCTGCTGATTCATTATCA +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLELTWTH*PADSLS
Trigger: TGATAATGAATCAGCAGGCCAGTGGGTCCATGTTAG...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAATCTATATTGGGCCTTaGCCAACCACCTGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEIYIGP*PTTCKL
Trigger: TAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGAT...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGTCTGCAGGAATGCAGTaGTGTGATCATGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRSAGMQ*CDHGSL
Trigger: CAGTGAACCATGATCACACCACTGCATTCCTGCAGA...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TATGGTTTTCTCACTTTATGGTATTACAACATAGGCATCCAAGTCAGGACAGATACCAATGGGTCCAGCTaGGAGTCTGAGGAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: YGFLTLWYYNIGIQVRTDTNGSS*ESEEGK
Trigger: TTTTCCTTCCTCAGACTCTCAGCTGGACCCATTGGT...ATCTGTCCTGACTTGGATGCCTATGTTGTAATACCATAAAGTGAGAAAACCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329966.10
CDS-3UTR TCA 90 bp ATGCTTCTTGGCAGCTCTAGGTTGATGAATATTTTCTATAGTAACATTGCCACTACCAATGGGTCCAGCTaGGAGTCTGAGGAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: MLLGSSRLMNIFYSNIATTNGSS*ESEEGK
Trigger: TTTTCCTTCCTCAGACTCTCAGCTGGACCCATTGGT...AGTGGCAATGTTACTATAGAAAATATTCATCAACCTAGAGCTGCCAAGAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR TCA 90 bp TGCCACTGTATCGATCATGATCTGTCTCCCGTAAACTTCTATATTTATTCATTCACCAATGGGTCCAGCTaGGAGTCTGAGGAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: CHCIDHDLSPVNFYIYSFTNGSS*ESEEGK
Trigger: TTTTCCTTCCTCAGACTCTCAGCTGGACCCATTGGT...GAATGAATAAATATAGAAGTTTACGGGAGACAGATCATGATCGATACAGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506871.5
ENST00000507717.5
CDS-3UTR TCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGGAAGTGAAATATCAATaGATGGATCTTTCACCGTGG +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLEREVKYQ*MDLSPW
Trigger: CCACGGTGAAAGATCCATTCATTGATATTTCACTTC...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp CACACCTTCTTTTCCATATGCAGCACTCTCTTCAATAAACGGTTTATTTGCAGGCCACTGTATCGATCATaGTCTGTCTCCCGTAAACTT +
Preference number: 4 (lower is better)
Translates to: HTFFSICSTLFNKRFICRPLYRS*SVSRKL
Trigger: AAGTTTACGGGAGACAGATCATGATCGATACAGTGG...CCTGCAAATAAACCGTTTATTGAAGAGAGTGCTGCATATGGAAAAGAAGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR TCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAGTGACTCAGAATTCATaGGGCTGGCAAACATTAAAG +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEVTQNS*GWQTLK
Trigger: CTTTAATGTTTGCCAGCCTCATGAATTCTGAGTCAC...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAAGCTTTCATTCAGACGTaGCTCAGAATTCATGAGGCT +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKAFIQT*LRIHEA
Trigger: AGCCTCATGAATTCTGAGTCACGTCTGAATGAAAGC...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAATCTCTGTCAAAATCTTaGTCTCCAGTTACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLESLSKS*SPVTVL
Trigger: CAGCACTGTAACTGGAGATCAAGATTTTGACAGAGA...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAAGTTCAGGACCATTTaGGGAACATGCTATTCCTAC +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEKFRTI*GTCYSY
Trigger: GTAGGAATAGCATGTTCCTCAAATGGTCCTGAACTT...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGGGTTCACCAAAATGGTaGAAAAGTTCAGGACCATTT +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERGSPKW*KSSGPF
Trigger: AAATGGTCCTGAACTTTTTCACCATTTTGGTGAACC...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGTCTCAAGGAATGATTTaGCTTAGCCAGCATCATTTC +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERSQGMI*LSQHHF
Trigger: GAAATGATGCTGGCTAAGTCAAATCATTCCTTGAGA...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAACACTGTCTCAAGGAATaGTTTGACTTAGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKHCLKE*FDLASI
Trigger: GATGCTGGCTAAGTCAAATCATTCCTTGAGACAGTG...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp GTCTGTTTACTTTACGAAGACTCAAGCCAGCCTGATGAAATCTTTTCAGGTGGAGTAAACCCACACTACTaGAATTACAGTGACACCCTT +
Preference number: 4 (lower is better)
Translates to: VCLLYEDSSQPDEIFSGGVNPHY*NYSDTL
Trigger: AAGGGTGTCACTGTAATTTCAGTAGTGTGGGTTTAC...TCCACCTGAAAAGATTTCATCAGGCTGGCTTGAGTCTTCGTAAAGTAAACAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp ATTTTCTCTGTCAAAATCTTGATCTCCAGTTACAGTGCTGCTCAAACGAAGTTCTTCCCAGGAGGAGAATaGAGTGGGACTAGGCATTTA +
Preference number: 4 (lower is better)
Translates to: IFSVKILISSYSAAQTKFFPGGE*SGTRHL
Trigger: TAAATGCCTAGTCCCACTTCATTCTCCTCCTGGGAA...GAACTTCGTTTGAGCAGCACTGTAACTGGAGATCAAGATTTTGACAGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTTCACTGCTCTGGTACTaGGATCTCCATGATAACAGA +
Preference number: 4 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTSLLWY*DLHDNR
Trigger: TCTGTTATCATGGAGATCTCAGTACCAGAGCAGTGA...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TACATGTCTGTTTACTTTACGAAGACTCAAGCCAGCCTGATGAAATCTTTTCAGTGTCAGCACTGTGACTaGCTCATAGCAAGTATGGGT +
Preference number: 4 (lower is better)
Translates to: YMSVYFTKTQASLMKSFQCQHCD*LIASMG
Trigger: ACCCATACTTGCTATGAGTCAGTCACAGTGCTGACA...CTGAAAAGATTTCATCAGGCTGGCTTGAGTCTTCGTAAAGTAAACAGACATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAATAGTGTCAGCACTGTaGCTGACTCATAGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEIVSAL*LTHSKY
Trigger: ATACTTGCTATGAGTCAGTCACAGTGCTGACACTAT...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp GTCTGTTTACTTTACGAAGACTCAAGCCAGCCTGATGAAATCTTTTCAGGTGGAGCCTGGCTAACAAATTaGTACCAACTATCACTCTTC +
Preference number: 4 (lower is better)
Translates to: VCLLYEDSSQPDEIFSGGAWLTN*YQLSLF
Trigger: GAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGC...TCCACCTGAAAAGATTTCATCAGGCTGGCTTGAGTCTTCGTAAAGTAAACAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR GCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAAGAGTATAAGTCTGTaGCAAGTTCTGCATGACTGC +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEKSISL*QVLHDC
Trigger: GCAGTCATGCAGAACTTGGCACAGACTTATACTCTT...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGTTTCAGTCTCCTTCATaGTGTGAAGAAACAGGAACA +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERFQSPS*CEETGT
Trigger: TGTTCCTGTTTCTTCACAGCATGAAGGAGACTGAAA...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000500704.7
CDS-3UTR GCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGTTCTTCTGTCCTCACTaGATCCAGAAGATAATGAAG +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERFFCPH*IQKIMK
Trigger: CTTCATTATCTTCTGGATGCAGTGAGGACAGAAGAA...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAACACCGTGGAGATATTTaGACATTCTTCACACATGAC +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEHRGDI*TFFTHD
Trigger: GTCATGTGTGAAGAATGTGCAAATATCTCCACGGTG...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000500704.7
CDS-3UTR GCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAAGATCTCCAGTTACAGTaGTGCTCAAACGAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKDLQLQ*CSNEVQ
Trigger: CTGAACTTCGTTTGAGCAGCACTGTAACTGGAGATC...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAACACTATGTTCCACTATaGCATAGAGACCGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEHYVPL*HRDRRE
Trigger: TTCTCTACGGTCTCTATGGCATAGTGGAACATAGTG...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGCCTTGGCCAACCACCTaGAAGTTATCCTTAACTCCA +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQEPWPTT*KLSLTP
Trigger: TGGAGTTAAGGATAACTTGCAGGTGGTTGGCCAAGG...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGTACCTGGCACTTGCCTaGACTATCATTCATTGGCAC +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQEYLALA*TIIHWH
Trigger: GTGCCAATGAATGATAGTGCAGGCAAGTGCCAGGTA...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGCCGATGAAAAGTGCATaGCTCTTAACAGTATCTTTC +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERPMKSA*LLTVSF
Trigger: GAAAGATACTGTTAAGAGGCATGCACTTTTCATCGG...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAACCATCCGATGAAAAGTaGATGCCTCTTAACAGTATC +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEPSDEK*MPLNSI
Trigger: GATACTGTTAAGAGGCATGCACTTTTCATCGGATGG...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAACAGCATGAGCCACCATaGCTGGCTAACAAATTGATA +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKQHEPP*LANKLI
Trigger: TATCAATTTGTTAGCCAGGCATGGTGGCTCATGCTG...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGCTAACATGGACCCACTaGCCTGCTGATTCATTATCA +
Preference number: 4 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRLTWTH*PADSLS
Trigger: TGATAATGAATCAGCAGGCCAGTGGGTCCATGTTAG...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTCTAACATGGACCCACTaGCCTGCTGATTCATTATCA +
Preference number: 4 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTLTWTH*PADSLS
Trigger: TGATAATGAATCAGCAGGCCAGTGGGTCCATGTTAG...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
3UTR CAA 72 bp GCCAATTCTAAATGTTATAATCATCTATATTGGGCCTaGGCCAACCACCTGCAAGTTATCCTTAACTCCACC +
Preference number: 4 (lower is better)
Translates to: ANSKCYNHLYWA*ANHLQVILNST
Trigger: GGTGGAGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAACATTTAGAATTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp CTTCATAGTCAGGGCAATAAGAGCAAAGTTACAGTAAAAACGACTATTCATGTTACCAATGGGTCCAGCTaGGAGTCTGAGGAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LHSQGNKSKVTVKTTIHVTNGSS*ESEEGK
Trigger: TTTTCCTTCCTCAGACTCTCAGCTGGACCCATTGGT...AACATGAATAGTCGTTTTTACTGTAACTTTGCTCTTATTGCCCTGACTATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329966.10
ENST00000472914.6
CDS-3UTR TCA 90 bp GAGCCATTTAATTTCTGTGTCTCCATTTCCTTATATATGAGGATAAGCTGCTTCGTCTCCTTCATGCTGTaGAGAAACAGGAACAAGGCT +
Preference number: 4 (lower is better)
Translates to: EPFNFCVSISLYMRISCFVSFML*RNRNKA
Trigger: AGCCTTGTTCCTGTTTCTTCACAGCATGAAGGAGAC...GAAGCAGCTTATCCTCATATATAAGGAAATGGAGACACAGAAATTAAATGGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329966.10
ENST00000472914.6
CDS-3UTR TCA 90 bp TGCCACTGTATCGATCATGATCTGTCTCCCGTAAACTTCTATATTTATTCATTCGTCTCCTTCATGCTGTaGAGAAACAGGAACAAGGCT +
Preference number: 4 (lower is better)
Translates to: CHCIDHDLSPVNFYIYSFVSFML*RNRNKA
Trigger: AGCCTTGTTCCTGTTTCTTCACAGCATGAAGGAGAC...GAATGAATAAATATAGAAGTTTACGGGAGACAGATCATGATCGATACAGTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506871.5
ENST00000507717.5
CDS-3UTR TCA 90 bp GTCTGTTTACTTTACGAAGACTCAAGCCAGCCTGATGAAATCTTTTCAGGTGGAGAAGTGAAATATCAATaGATGGATCTTTCACCGTGG +
Preference number: 4 (lower is better)
Translates to: VCLLYEDSSQPDEIFSGGEVKYQ*MDLSPW
Trigger: CCACGGTGAAAGATCCATTCATTGATATTTCACTTC...TCCACCTGAAAAGATTTCATCAGGCTGGCTTGAGTCTTCGTAAAGTAAACAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGCCACTGTATCGATCATaGTCTGTCTCCCGTAAACTT +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQEPLYRS*SVSRKL
Trigger: AAGTTTACGGGAGACAGATCATGATCGATACAGTGG...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAACTCTTATCTTTAGATaGAGAATGCTTCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLETLIFR*RMLLGS
Trigger: GCTGCCAAGAAGCATTCTTCATCTAAAGATAAGAGT...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAACATTTTTCTGGTATGTaGCAGTTTCTCCAGATGACA +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEHFSGM*QFLQMT
Trigger: TGTCATCTGGAGAAACTGTCACATACCAGAAAAATG...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGGTGACTCAGAATTCATaGGGCTGGCAAACATTAAAG +
Preference number: 4 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRVTQNS*GWQTLK
Trigger: CTTTAATGTTTGCCAGCCTCATGAATTCTGAGTCAC...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp ATTTTCTCTGTCAAAATCTTGATCTCCAGTTACAGTGCTGCTCAAACGAAGTTCGCTTTCATTCAGACGTaGCTCAGAATTCATGAGGCT +
Preference number: 4 (lower is better)
Translates to: IFSVKILISSYSAAQTKFAFIQT*LRIHEA
Trigger: AGCCTCATGAATTCTGAGTCACGTCTGAATGAAAGC...GAACTTCGTTTGAGCAGCACTGTAACTGGAGATCAAGATTTTGACAGAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGTCTCTGTCAAAATCTTaGTCTCCAGTTACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRSLSKS*SPVTVL
Trigger: CAGCACTGTAACTGGAGATCAAGATTTTGACAGAGA...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTTCTCTGTCAAAATCTTaGTCTCCAGTTACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTSLSKS*SPVTVL
Trigger: CAGCACTGTAACTGGAGATCAAGATTTTGACAGAGA...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAGGTTCACCAAAATGGTaGAAAAGTTCAGGACCATTT +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEGSPKW*KSSGPF
Trigger: AAATGGTCCTGAACTTTTTCACCATTTTGGTGAACC...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGAGCCAGCATCATTTCTaGATGCTTGTAATAATAAGC +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERSQHHF*MLVIIS
Trigger: GCTTATTATTACAAGCATTCAGAAATGATGCTGGCT...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGCACTGTCTCAAGGAATaGTTTGACTTAGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQEHCLKE*FDLASI
Trigger: GATGCTGGCTAAGTCAAATCATTCCTTGAGACAGTG...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGCTACTGAAATTACAGTaGCACCCTTTTATATGGTTG +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERLLKLQ*HPFIWL
Trigger: CAACCATATAAAAGGGTGTCACTGTAATTTCAGTAG...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TACATGTCTGTTTACTTTACGAAGACTCAAGCCAGCCTGATGAAATCTTTTCAGTCACTGCTCTGGTACTaGGATCTCCATGATAACAGA +
Preference number: 4 (lower is better)
Translates to: YMSVYFTKTQASLMKSFQSLLWY*DLHDNR
Trigger: TCTGTTATCATGGAGATCTCAGTACCAGAGCAGTGA...CTGAAAAGATTTCATCAGGCTGGCTTGAGTCTTCGTAAAGTAAACAGACATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTGAAACAAGAAACAAGTaGCCATCCGATGAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTETRNK*PSDEKC
Trigger: GCACTTTTCATCGGATGGTCACTTGTTTCTTGTTTC...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTATAGTGTCAGCACTGTaGCTGACTCATAGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTIVSAL*LTHSKY
Trigger: ATACTTGCTATGAGTCAGTCACAGTGCTGACACTAT...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGATTTATACTGTTTCCTaGGGTGATCCAGAAACTACT +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERIYTVS*GDPETT
Trigger: AGTAGTTTCTGGATCACCTCAGGAAACAGTATAAAT...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGCTGGAACTCTTAAAGTaGTTCAATGAATGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERLELLK*FNECWL
Trigger: AAGCCAACATTCATTGAAGCACTTTAAGAGTTCCAG...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAATTTCAGTCTCCTTCATaGTGTGAAGAAACAGGAACA +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEFQSPS*CEETGT
Trigger: TGTTCCTGTTTCTTCACAGCATGAAGGAGACTGAAA...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000500704.7
CDS-3UTR GCA 90 bp CCATATGCAGCACTCTCTTCAATAAACGGTTTATTTGCAGGAGTCTTTGGAGCATTTCAGTCTCCTTCATaGTGTGAAGAAACAGGAACA +
Preference number: 4 (lower is better)
Translates to: PYAALSSINGLFAGVFGAFQSPS*CEETGT
Trigger: TGTTCCTGTTTCTTCACAGCATGAAGGAGACTGAAA...TGCTCCAAAGACTCCTGCAAATAAACCGTTTATTGAAGAGAGTGCTGCATATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR GCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGCTGAACAGCCCAGTCTaGTTTGAAGCACTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQELNSPV*FEALSD
Trigger: ATCTGAAAGTGCTTCAAAGCAGACTGGGCTGTTCAG...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGATCTCCAGTTACAGTaGTGCTCAAACGAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQEDLQLQ*CSNEVQ
Trigger: CTGAACTTCGTTTGAGCAGCACTGTAACTGGAGATC...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGTTTATCTCCCACACTTaGATTCTTACAAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERFISHT*ILTSSR
Trigger: TCTGCTACTTGTAAGAATGCAAGTGTGGGAGATAAA...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGCACTATGTTCCACTATaGCATAGAGACCGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRHYVPL*HRDRRE
Trigger: TTCTCTACGGTCTCTATGGCATAGTGGAACATAGTG...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTCCATCCGATGAAAAGTaGATGCCTCTTAACAGTATC +
Preference number: 4 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTPSDEK*MPLNSI
Trigger: GATACTGTTAAGAGGCATGCACTTTTCATCGGATGG...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp GAGATATTTGCACATTCTTCACACATGACCGTGCTAGTTAATTCACCAATAAAGTTTTTACCACATCCCTaGAAGCCACACTTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: EIFAHSSHMTVLVNSPIKFLPHP*KPHLRH
Trigger: GTGCCTCAAGTGTGGCTTCCAGGGATGTGGTAAAAA...CTTTATTGGTGAATTAACTAGCACGGTCATGTGTGAAGAATGTGCAAATATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR CCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAATGCTTTCAGAATGGCTaGCTTCTTTTTCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLECFQNG*LLFHCH
Trigger: ATGACAGTGAAAAAGAAGCCAGCCATTCTGAAAGCA...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTGTTCCGATAATTTCCTaGAGGGTGTTCTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTVPIIS*RVFSLS
Trigger: TGAAAGTGAGAACACCCTCCAGGAAATTATCGGAAC...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGGTTCCGATAATTTCCTaGAGGGTGTTCTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRVPIIS*RVFSLS
Trigger: TGAAAGTGAGAACACCCTCCAGGAAATTATCGGAAC...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGTATAATCATCTATATTaGGCCTTGGCCAACCACCTG +
Preference number: 4 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRYNHLY*ALANHL
Trigger: CAGGTGGTTGGCCAAGGCCCAATATAGATGATTATA...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp TCAAGCCAGCCTGATGAAATCTTTTCAGGTGGAGAATTAGGACAGCTGGAACAGAGCTACCTAAAAAGGTaGTCTTCACAAGTTTTAAGA +
Preference number: 4 (lower is better)
Translates to: SSQPDEIFSGGELGQLEQSYLKR*SSQVLR
Trigger: TCTTAAAACTTGTGAAGACCACCTTTTTAGGTAGCT...CTGTTCCAGCTGTCCTAATTCTCCACCTGAAAAGATTTCATCAGGCTGGCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp TTTCTCACTTTATGGTATTACAACATAGGCATCCAAGTCAGGACAGATCTCCATTTCACGCTGATAGCATaGCTTACATGTTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: FLTLWYYNIGIQVRTDLHFTLIA*LTCWQV
Trigger: AACTTGCCAACATGTAAGTCATGCTATCAGCGTGAA...ATGGAGATCTGTCCTGACTTGGATGCCTATGTTGTAATACCATAAAGTGAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329966.10
CDS-3UTR TCA 90 bp TTTAGTTCTCTTCATAGTCAGGGCAATAAGAGCAAAGTTACAGTAAAAACGACTGTCTCCTTCATGCTGTaGAGAAACAGGAACAAGGCT +
Preference number: 4 (lower is better)
Translates to: FSSLHSQGNKSKVTVKTTVSFML*RNRNKA
Trigger: AGCCTTGTTCCTGTTTCTTCACAGCATGAAGGAGAC...AGTCGTTTTTACTGTAACTTTGCTCTTATTGCCCTGACTATGAAGAGAACTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329966.10
ENST00000472914.6
CDS-3UTR TCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAAGAAGTGAAATATCAATaGATGGATCTTTCACCGTGG +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKEVKYQ*MDLSPW
Trigger: CCACGGTGAAAGATCCATTCATTGATATTTCACTTC...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp CACACCTTCTTTTCCATATGCAGCACTCTCTTCAATAAACGGTTTATTTGCAGGGAAGTGAAATATCAATaGATGGATCTTTCACCGTGG +
Preference number: 4 (lower is better)
Translates to: HTFFSICSTLFNKRFICREVKYQ*MDLSPW
Trigger: CCACGGTGAAAGATCCATTCATTGATATTTCACTTC...CCTGCAAATAAACCGTTTATTGAAGAGAGTGCTGCATATGGAAAAGAAGGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR TCA 90 bp ATGCTTCTTGGCAGCTCTAGGTTGATGAATATTTTCTATAGTAACATTGCCACTCCACTGTATCGATCATaGTCTGTCTCCCGTAAACTT +
Preference number: 4 (lower is better)
Translates to: MLLGSSRLMNIFYSNIATPLYRS*SVSRKL
Trigger: AAGTTTACGGGAGACAGATCATGATCGATACAGTGG...AGTGGCAATGTTACTATAGAAAATATTCATCAACCTAGAGCTGCCAAGAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496518.6
ENST00000506871.5
CDS-3UTR TCA 90 bp TGCCACTGTATCGATCATGATCTGTCTCCCGTAAACTTCTATATTTATTCATTCCCACTGTATCGATCATaGTCTGTCTCCCGTAAACTT +
Preference number: 4 (lower is better)
Translates to: CHCIDHDLSPVNFYIYSFPLYRS*SVSRKL
Trigger: AAGTTTACGGGAGACAGATCATGATCGATACAGTGG...GAATGAATAAATATAGAAGTTTACGGGAGACAGATCATGATCGATACAGTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496518.6
ENST00000506871.5
ENST00000507717.5
CDS-3UTR TCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTACTCTTATCTTTAGATaGAGAATGCTTCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTTLIFR*RMLLGS
Trigger: GCTGCCAAGAAGCATTCTTCATCTAAAGATAAGAGT...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTCATTTTTCTGGTATGTaGCAGTTTCTCCAGATGACA +
Preference number: 4 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTHFSGM*QFLQMT
Trigger: TGTCATCTGGAGAAACTGTCACATACCAGAAAAATG...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAGAGACAGGACTGAATTaGACATTCTTTAGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEETGLN*TFFRSS
Trigger: ACTACTTCTAAAGAATGTTCAATTCAGTCCTGTCTC...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp ATTTTCTCTGTCAAAATCTTGATCTCCAGTTACAGTGCTGCTCAAACGAAGTTCAAGTTCAGGACCATTTaGGGAACATGCTATTCCTAC +
Preference number: 4 (lower is better)
Translates to: IFSVKILISSYSAAQTKFKFRTI*GTCYSY
Trigger: GTAGGAATAGCATGTTCCTCAAATGGTCCTGAACTT...GAACTTCGTTTGAGCAGCACTGTAACTGGAGATCAAGATTTTGACAGAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGGGTTCACCAAAATGGTaGAAAAGTTCAGGACCATTT +
Preference number: 4 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRGSPKW*KSSGPF
Trigger: AAATGGTCCTGAACTTTTTCACCATTTTGGTGAACC...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTTCTCAAGGAATGATTTaGCTTAGCCAGCATCATTTC +
Preference number: 4 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTSQGMI*LSQHHF
Trigger: GAAATGATGCTGGCTAAGTCAAATCATTCCTTGAGA...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTACCACTAGATGGCCCTaGGATGATTTTAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTTTRWP*DDFKLS
Trigger: ACTTAACTTAAAATCATCTCAGGGCCATCTAGTGGT...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGTAAACCCACACTACTaGAATTACAGTGACACCCTT +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQEVNPHY*NYSDTL
Trigger: AAGGGTGTCACTGTAATTTCAGTAGTGTGGGTTTAC...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGCCTGGCTAACAAATTaGTACCAACTATCACTCTTC +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQEAWLTN*YQLSLF
Trigger: GAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGC...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TTTCTCACTTTATGGTATTACAACATAGGCATCCAAGTCAGGACAGATCTCCATGGACAGATCTCCATTTaGTTCTCAGCTTTTCACTCA +
Preference number: 4 (lower is better)
Translates to: FLTLWYYNIGIQVRTDLHGQISI*FSAFHS
Trigger: TGAGTGAAAAGCTGAGAATCAAATGGAGATCTGTCC...ATGGAGATCTGTCCTGACTTGGATGCCTATGTTGTAATACCATAAAGTGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329966.10
CDS-3UTR TCA 90 bp CACACCTTCTTTTCCATATGCAGCACTCTCTTCAATAAACGGTTTATTTGCAGGTCTCTTATCTTTAGATaGAGAATGCTTCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: HTFFSICSTLFNKRFICRSLIFR*RMLLGS
Trigger: GCTGCCAAGAAGCATTCTTCATCTAAAGATAAGAGA...CCTGCAAATAAACCGTTTATTGAAGAGAGTGCTGCATATGGAAAAGAAGGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR GCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGAAGAGTATAAGTCTGTaGCAAGTTCTGCATGACTGC +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQEKSISL*QVLHDC
Trigger: GCAGTCATGCAGAACTTGGCACAGACTTATACTCTT...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAATTCTTCTGTCCTCACTaGATCCAGAAGATAATGAAG +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKFFCPH*IQKIMK
Trigger: CTTCATTATCTTCTGGATGCAGTGAGGACAGAAGAA...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGCACCGTGGAGATATTTaGACATTCTTCACACATGAC +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQEHRGDI*TFFTHD
Trigger: GTCATGTGTGAAGAATGTGCAAATATCTCCACGGTG...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327681.10
ENST00000500704.7
CDS-3UTR GCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAATTCAGAAATAGCTTCTaGCATTTCCTTATCACCACT +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEFRNSF*HFLITT
Trigger: AGTGGTGATAAGGAAATGGCAGAAGCTATTTCTGAA...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAATTTATCTCCCACACTTaGATTCTTACAAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEFISHT*ILTSSR
Trigger: TCTGCTACTTGTAAGAATGCAAGTGTGGGAGATAAA...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp TACATGTCTGTTTACTTTACGAAGACTCAAGCCAGCCTGATGAAATCTTTTCAGCACTATGTTCCACTATaGCATAGAGACCGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: YMSVYFTKTQASLMKSFQHYVPL*HRDRRE
Trigger: TTCTCTACGGTCTCTATGGCATAGTGGAACATAGTG...CTGAAAAGATTTCATCAGGCTGGCTTGAGTCTTCGTAAAGTAAACAGACATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR GCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAATTTCCATACCTTATCTaGAGCCACTATTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEFPYLI*SHYSYP
Trigger: AGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAA...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp ATGCTTCTTGGCAGCTCTAGGTTGATGAATATTTTCTATAGTAACATTGCCACTCAGCATGAGCCACCATaGCTGGCTAACAAATTGATA +
Preference number: 4 (lower is better)
Translates to: MLLGSSRLMNIFYSNIATQHEPP*LANKLI
Trigger: TATCAATTTGTTAGCCAGGCATGGTGGCTCATGCTG...AGTGGCAATGTTACTATAGAAAATATTCATCAACCTAGAGCTGCCAAGAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR CCA 90 bp TTTAGTTCTCTTCATAGTCAGGGCAATAAGAGCAAAGTTACAGTAAAAACGACTTTTTTACCACATCCCTaGAAGCCACACTTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: FSSLHSQGNKSKVTVKTTFLPHP*KPHLRH
Trigger: GTGCCTCAAGTGTGGCTTCCAGGGATGTGGTAAAAA...AGTCGTTTTTACTGTAACTTTGCTCTTATTGCCCTGACTATGAAGAGAACTAAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000329966.10
ENST00000472914.6
CDS-3UTR CCA 90 bp CTTCATAGTCAGGGCAATAAGAGCAAAGTTACAGTAAAAACGACTATTCATGTTTTTTTACCACATCCCTaGAAGCCACACTTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LHSQGNKSKVTVKTTIHVFLPHP*KPHLRH
Trigger: GTGCCTCAAGTGTGGCTTCCAGGGATGTGGTAAAAA...AACATGAATAGTCGTTTTTACTGTAACTTTGCTCTTATTGCCCTGACTATGAAG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329966.10
ENST00000472914.6
CDS-3UTR CCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTTGCTTTCAGAATGGCTaGCTTCTTTTTCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTCFQNG*LLFHCH
Trigger: ATGACAGTGAAAAAGAAGCCAGCCATTCTGAAAGCA...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAATGCTTTCAGAATGGCTaGCTTCTTTTTCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKCFQNG*LLFHCH
Trigger: ATGACAGTGAAAAAGAAGCCAGCCATTCTGAAAGCA...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAAATGGATCTTTCACCGTaGAGATCTTTGTTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKMDLSP*RSLFLL
Trigger: CAGAAGAAACAAAGATCTCCACGGTGAAAGATCCAT...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp GAGATATTTGCACATTCTTCACACATGACCGTGCTAGTTAATTCACCAATAAAGTTCACGCTGATAGCATaGCTTACATGTTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: EIFAHSSHMTVLVNSPIKFTLIA*LTCWQV
Trigger: AACTTGCCAACATGTAAGTCATGCTATCAGCGTGAA...CTTTATTGGTGAATTAACTAGCACGGTCATGTGTGAAGAATGTGCAAATATCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR TCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGAAGTGAAATATCAATaGATGGATCTTTCACCGTGG +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQEEVKYQ*MDLSPW
Trigger: CCACGGTGAAAGATCCATTCATTGATATTTCACTTC...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGCATTTTTCTGGTATGTaGCAGTTTCTCCAGATGACA +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQEHFSGM*QFLQMT
Trigger: TGTCATCTGGAGAAACTGTCACATACCAGAAAAATG...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TACATGTCTGTTTACTTTACGAAGACTCAAGCCAGCCTGATGAAATCTTTTCAGCATTTTTCTGGTATGTaGCAGTTTCTCCAGATGACA +
Preference number: 4 (lower is better)
Translates to: YMSVYFTKTQASLMKSFQHFSGM*QFLQMT
Trigger: TGTCATCTGGAGAAACTGTCACATACCAGAAAAATG...CTGAAAAGATTTCATCAGGCTGGCTTGAGTCTTCGTAAAGTAAACAGACATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp ATGCTTCTTGGCAGCTCTAGGTTGATGAATATTTTCTATAGTAACATTGCCACTTCTCTGTCAAAATCTTaGTCTCCAGTTACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: MLLGSSRLMNIFYSNIATSLSKS*SPVTVL
Trigger: CAGCACTGTAACTGGAGATCAAGATTTTGACAGAGA...AGTGGCAATGTTACTATAGAAAATATTCATCAACCTAGAGCTGCCAAGAAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAAAGCCAGCATCATTTCTaGATGCTTGTAATAATAAGC +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKSQHHF*MLVIIS
Trigger: GCTTATTATTACAAGCATTCAGAAATGATGCTGGCT...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGACCACTAGATGGCCCTaGGATGATTTTAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQETTRWP*DDFKLS
Trigger: ACTTAACTTAAAATCATCTCAGGGCCATCTAGTGGT...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAAGAATTGTATAAAATATaGCCAGGGAACTACACCGTA +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKELYKI*PGNYTV
Trigger: TACGGTGTAGTTCCCTGGTCATATTTTATACAATTC...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTCAGATTCTCAGCTATTaGTCTCTTTACATGATTCAC +
Preference number: 4 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTQILSY*SLYMIH
Trigger: GTGAATCATGTAAAGAGAGCAATAGCTGAGAATCTG...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAACTGGAACTCTTAAAGTaGTTCAATGAATGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKLELLK*FNECWL
Trigger: AAGCCAACATTCATTGAAGCACTTTAAGAGTTCCAG...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp TACAACATAGGCATCCAAGTCAGGACAGATCTCCATTTGATTCTCAGCTTTTCACTGGAACTCTTAAAGTaGTTCAATGAATGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: YNIGIQVRTDLHLILSFSLELLK*FNECWL
Trigger: AAGCCAACATTCATTGAAGCACTTTAAGAGTTCCAG...TGAAAAGCTGAGAATCAAATGGAGATCTGTCCTGACTTGGATGCCTATGTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329966.10
CDS-3UTR GCA 90 bp GAGATATTTGCACATTCTTCACACATGACCGTGCTAGTTAATTCACCAATAAAGAAGAGTATAAGTCTGTaGCAAGTTCTGCATGACTGC +
Preference number: 4 (lower is better)
Translates to: EIFAHSSHMTVLVNSPIKKSISL*QVLHDC
Trigger: GCAGTCATGCAGAACTTGGCACAGACTTATACTCTT...CTTTATTGGTGAATTAACTAGCACGGTCATGTGTGAAGAATGTGCAAATATCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR GCA 90 bp TGCCACTGTATCGATCATGATCTGTCTCCCGTAAACTTCTATATTTATTCATTCAAGAGTATAAGTCTGTaGCAAGTTCTGCATGACTGC +
Preference number: 4 (lower is better)
Translates to: CHCIDHDLSPVNFYIYSFKSISL*QVLHDC
Trigger: GCAGTCATGCAGAACTTGGCACAGACTTATACTCTT...GAATGAATAAATATAGAAGTTTACGGGAGACAGATCATGATCGATACAGTGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496518.6
ENST00000506871.5
ENST00000507717.5
CDS-3UTR GCA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTTTTATCTCCCACACTTaGATTCTTACAAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTFISHT*ILTSSR
Trigger: TCTGCTACTTGTAAGAATGCAAGTGTGGGAGATAAA...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGTTTCCATACCTTATCTaGAGCCACTATTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRFPYLI*SHYSYP
Trigger: AGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAA...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGCCGATGAAAAGTGCATaGCTCTTAACAGTATCTTTC +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQEPMKSA*LLTVSF
Trigger: GAAAGATACTGTTAAGAGGCATGCACTTTTCATCGG...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAATGCTTCAATGAATGTTaGCTTTCTGAGTTTTTACCA +
Preference number: 4 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLECFNEC*LSEFLP
Trigger: TGGTAAAAACTCAGAAAGCCAACATTCATTGAAGCA...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TTTAGTTCTCTTCATAGTCAGGGCAATAAGAGCAAAGTTACAGTAAAAACGACTTTCACGCTGATAGCATaGCTTACATGTTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: FSSLHSQGNKSKVTVKTTFTLIA*LTCWQV
Trigger: AACTTGCCAACATGTAAGTCATGCTATCAGCGTGAA...AGTCGTTTTTACTGTAACTTTGCTCTTATTGCCCTGACTATGAAGAGAACTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329966.10
ENST00000472914.6
CDS-3UTR TCA 90 bp TGCCACTGTATCGATCATGATCTGTCTCCCGTAAACTTCTATATTTATTCATTCGAAGTGAAATATCAATaGATGGATCTTTCACCGTGG +
Preference number: 4 (lower is better)
Translates to: CHCIDHDLSPVNFYIYSFEVKYQ*MDLSPW
Trigger: CCACGGTGAAAGATCCATTCATTGATATTTCACTTC...GAATGAATAAATATAGAAGTTTACGGGAGACAGATCATGATCGATACAGTGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496518.6
ENST00000506871.5
ENST00000507717.5
CDS-3UTR TCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGAGACAGGACTGAATTaGACATTCTTTAGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQEETGLN*TFFRSS
Trigger: ACTACTTCTAAAGAATGTTCAATTCAGTCCTGTCTC...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR TCA 90 bp TACATGTCTGTTTACTTTACGAAGACTCAAGCCAGCCTGATGAAATCTTTTCAGAGCCAGCATCATTTCTaGATGCTTGTAATAATAAGC +
Preference number: 4 (lower is better)
Translates to: YMSVYFTKTQASLMKSFQSQHHF*MLVIIS
Trigger: GCTTATTATTACAAGCATTCAGAAATGATGCTGGCT...CTGAAAAGATTTCATCAGGCTGGCTTGAGTCTTCGTAAAGTAAACAGACATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR TCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGAATTGTATAAAATATaGCCAGGGAACTACACCGTA +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQEELYKI*PGNYTV
Trigger: TACGGTGTAGTTCCCTGGTCATATTTTATACAATTC...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp TTTAGTTCTCTTCATAGTCAGGGCAATAAGAGCAAAGTTACAGTAAAAACGACTAAGAGTATAAGTCTGTaGCAAGTTCTGCATGACTGC +
Preference number: 4 (lower is better)
Translates to: FSSLHSQGNKSKVTVKTTKSISL*QVLHDC
Trigger: GCAGTCATGCAGAACTTGGCACAGACTTATACTCTT...AGTCGTTTTTACTGTAACTTTGCTCTTATTGCCCTGACTATGAAGAGAACTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329966.10
ENST00000472914.6
CDS-3UTR GCA 90 bp TATGGTTTTCTCACTTTATGGTATTACAACATAGGCATCCAAGTCAGGACAGATTTTCAGTCTCCTTCATaGTGTGAAGAAACAGGAACA +
Preference number: 4 (lower is better)
Translates to: YGFLTLWYYNIGIQVRTDFQSPS*CEETGT
Trigger: TGTTCCTGTTTCTTCACAGCATGAAGGAGACTGAAA...ATCTGTCCTGACTTGGATGCCTATGTTGTAATACCATAAAGTGAGAAAACCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329966.10
CDS-3UTR GCA 90 bp TGCCACTGTATCGATCATGATCTGTCTCCCGTAAACTTCTATATTTATTCATTCTTTCAGTCTCCTTCATaGTGTGAAGAAACAGGAACA +
Preference number: 4 (lower is better)
Translates to: CHCIDHDLSPVNFYIYSFFQSPS*CEETGT
Trigger: TGTTCCTGTTTCTTCACAGCATGAAGGAGACTGAAA...GAATGAATAAATATAGAAGTTTACGGGAGACAGATCATGATCGATACAGTGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506871.5
ENST00000507717.5
CDS-3UTR GCA 90 bp TGCCACTGTATCGATCATGATCTGTCTCCCGTAAACTTCTATATTTATTCATTCTTCTTCTGTCCTCACTaGATCCAGAAGATAATGAAG +
Preference number: 4 (lower is better)
Translates to: CHCIDHDLSPVNFYIYSFFFCPH*IQKIMK
Trigger: CTTCATTATCTTCTGGATGCAGTGAGGACAGAAGAA...GAATGAATAAATATAGAAGTTTACGGGAGACAGATCATGATCGATACAGTGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496518.6
ENST00000506871.5
ENST00000507717.5
CDS-3UTR GCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGTTCAGAAATAGCTTCTaGCATTTCCTTATCACCACT +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQEFRNSF*HFLITT
Trigger: AGTGGTGATAAGGAAATGGCAGAAGCTATTTCTGAA...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAAAGGATGCTTGAACCATaGAGTTTTGTTTCTATTTCA +
Preference number: 4 (lower is better)
Translates to: PCLANKLIPTITLLSYLKRMLEP*SFVSIS
Trigger: TGAAATAGAAACAAAACTGCATGGTTCAAGCATCCT...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp CACACCTTCTTTTCCATATGCAGCACTCTCTTCAATAAACGGTTTATTTGCAGGACCTTCTTTTCCATATaGAGCACTCTCTTCAATAAA +
Preference number: 4 (lower is better)
Translates to: HTFFSICSTLFNKRFICRTFFSI*STLFNK
Trigger: TTTATTGAAGAGAGTGCTGCATATGGAAAAGAAGGT...CCTGCAAATAAACCGTTTATTGAAGAGAGTGCTGCATATGGAAAAGAAGGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR CCA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGTGCTTCAATGAATGTTaGCTTTCTGAGTTTTTACCA +
Preference number: 4 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRCFNEC*LSEFLP
Trigger: TGGTAAAAACTCAGAAAGCCAACATTCATTGAAGCA...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CCA 90 bp TACAACATAGGCATCCAAGTCAGGACAGATCTCCATTTGATTCTCAGCTTTTCAGGTTTTCTCACTTTATaGTATTACAACATAGGCATC +
Preference number: 4 (lower is better)
Translates to: YNIGIQVRTDLHLILSFSGFLTL*YYNIGI
Trigger: GATGCCTATGTTGTAATACCATAAAGTGAGAAAACC...TGAAAAGCTGAGAATCAAATGGAGATCTGTCCTGACTTGGATGCCTATGTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329966.10
3UTR CAA 72 bp CTGACTCATAGCAAGTATGGGTATCTATCCAAATATTaGTCTTTGAAACAAGAAACAAGTGACCATCCGATG +
Preference number: 4 (lower is better)
Translates to: LTHSKYGYLSKY*SLKQETSDHPM
Trigger: CATCGGATGGTCACTTGTTTCTTGTTTCAAAGACAAATATTTGGATAGATACCCATACTTGCTATGAGTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp GAGATATTTGCACATTCTTCACACATGACCGTGCTAGTTAATTCACCAATAAAGCTGGAACTCTTAAAGTaGTTCAATGAATGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: EIFAHSSHMTVLVNSPIKLELLK*FNECWL
Trigger: AAGCCAACATTCATTGAAGCACTTTAAGAGTTCCAG...CTTTATTGGTGAATTAACTAGCACGGTCATGTGTGAAGAATGTGCAAATATCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR GCA 90 bp CTTCATAGTCAGGGCAATAAGAGCAAAGTTACAGTAAAAACGACTATTCATGTTTTTCAGTCTCCTTCATaGTGTGAAGAAACAGGAACA +
Preference number: 4 (lower is better)
Translates to: LHSQGNKSKVTVKTTIHVFQSPS*CEETGT
Trigger: TGTTCCTGTTTCTTCACAGCATGAAGGAGACTGAAA...AACATGAATAGTCGTTTTTACTGTAACTTTGCTCTTATTGCCCTGACTATGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329966.10
ENST00000472914.6
CDS-3UTR GCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGAGGATGCTTGAACCATaGAGTTTTGTTTCTATTTCA +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQERMLEP*SFVSIS
Trigger: TGAAATAGAAACAAAACTGCATGGTTCAAGCATCCT...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp ATGCTTCTTGGCAGCTCTAGGTTGATGAATATTTTCTATAGTAACATTGCCACTAATAAACGGTTTATTTaGAGGAGTCTTTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: MLLGSSRLMNIFYSNIATNKRFI*RSLWST
Trigger: AGTGCTCCAAAGACTCCTGCAAATAAACCGTTTATT...AGTGGCAATGTTACTATAGAAAATATTCATCAACCTAGAGCTGCCAAGAAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR CCA 90 bp TACATGTCTGTTTACTTTACGAAGACTCAAGCCAGCCTGATGAAATCTTTTCAGTGCTTCAATGAATGTTaGCTTTCTGAGTTTTTACCA +
Preference number: 4 (lower is better)
Translates to: YMSVYFTKTQASLMKSFQCFNEC*LSEFLP
Trigger: TGGTAAAAACTCAGAAAGCCAACATTCATTGAAGCA...CTGAAAAGATTTCATCAGGCTGGCTTGAGTCTTCGTAAAGTAAACAGACATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR CCA 90 bp ACACCTTCTTTTCCATATGCAGCACTCTCTTCAATAAACGGTTTATTTGCAGGATGCTTCAATGAATGTTaGCTTTCTGAGTTTTTACCA +
Preference number: 4 (lower is better)
Translates to: TPSFPYAALSSINGLFAGCFNEC*LSEFLP
Trigger: TGGTAAAAACTCAGAAAGCCAACATTCATTGAAGCA...TCCTGCAAATAAACCGTTTATTGAAGAGAGTGCTGCATATGGAAAAGAAGGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR CCA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGAGCTACCTAAAAAGGTaGTCTTCACAAGTTTTAAGA +
Preference number: 4 (lower is better)
Translates to: KYFHTLSAATILILSSQESYLKR*SSQVLR
Trigger: TCTTAAAACTTGTGAAGACCACCTTTTTAGGTAGCT...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR GCA 90 bp CTTCATAGTCAGGGCAATAAGAGCAAAGTTACAGTAAAAACGACTATTCATGTTCTGGAACTCTTAAAGTaGTTCAATGAATGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LHSQGNKSKVTVKTTIHVLELLK*FNECWL
Trigger: AAGCCAACATTCATTGAAGCACTTTAAGAGTTCCAG...AACATGAATAGTCGTTTTTACTGTAACTTTGCTCTTATTGCCCTGACTATGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329966.10
ENST00000472914.6
CDS-3UTR GCA 90 bp TGCCACTGTATCGATCATGATCTGTCTCCCGTAAACTTCTATATTTATTCATTCAGGATGCTTGAACCATaGAGTTTTGTTTCTATTTCA +
Preference number: 4 (lower is better)
Translates to: CHCIDHDLSPVNFYIYSFRMLEP*SFVSIS
Trigger: TGAAATAGAAACAAAACTGCATGGTTCAAGCATCCT...GAATGAATAAATATAGAAGTTTACGGGAGACAGATCATGATCGATACAGTGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR CCA 90 bp GAGCCATTTAATTTCTGTGTCTCCATTTCCTTATATATGAGGATAAGCTGCTTCTGCTTCAATGAATGTTaGCTTTCTGAGTTTTTACCA +
Preference number: 4 (lower is better)
Translates to: EPFNFCVSISLYMRISCFCFNEC*LSEFLP
Trigger: TGGTAAAAACTCAGAAAGCCAACATTCATTGAAGCA...GAAGCAGCTTATCCTCATATATAAGGAAATGGAGACACAGAAATTAAATGGCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329966.10
ENST00000472914.6
CDS-3UTR GCA 90 bp TTTAGTTCTCTTCATAGTCAGGGCAATAAGAGCAAAGTTACAGTAAAAACGACTCACTTAAACTCTATTTaGCTCACAGCTCATCTTTTA +
Preference number: 4 (lower is better)
Translates to: FSSLHSQGNKSKVTVKTTHLNSI*LTAHLL
Trigger: TAAAAGATGAGCTGTGAGGCAAATAGAGTTTAAGTG...AGTCGTTTTTACTGTAACTTTGCTCTTATTGCCCTGACTATGAAGAGAACTAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329966.10
CDS-3UTR CCA 90 bp CTTCATAGTCAGGGCAATAAGAGCAAAGTTACAGTAAAAACGACTATTCATGTTTGCTTCAATGAATGTTaGCTTTCTGAGTTTTTACCA +
Preference number: 4 (lower is better)
Translates to: LHSQGNKSKVTVKTTIHVCFNEC*LSEFLP
Trigger: TGGTAAAAACTCAGAAAGCCAACATTCATTGAAGCA...AACATGAATAGTCGTTTTTACTGTAACTTTGCTCTTATTGCCCTGACTATGAAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329966.10
ENST00000472914.6
CDS TCA 90 bp CGCATGGACCCGGAGCCGGCAGAGCGGCGCTCACACGGCCCTCGGTaGCCGCCCGGCGCCCCCAGGGATCAGGAAGCCGAGTGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: RMDPEPAERRSHGPR*PPGAPRDQEAEWGG
Trigger: CCCACCCCACTCGGCTTCCTGATCCCTGGGGGCGCCGGGCGGTCACCGAGGGCCGTGTGAGCGCCGCTCTGCCGGCTCCGGGTCCATGCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327681.10
ENST00000472914.6
CDS GCA 90 bp CGGCCGCCGGCCCGCAATGGTGCTACCCTGGTTGCTGCTCGAGACTaGGCGCAGGGCGGTCCTCGGGTCCGCGGAGGCTGCGCTCTGCGG +
Preference number: 5 (lower is better)
Translates to: RPPARNGATLVAARD*AQGGPRVRGGCALR
Trigger: CCGCAGAGCGCAGCCTCCGCGGACCCGAGGACCGCCCTGCGCGCAGTCTCGAGCAGCAACCAGGGTAGCACCATTGCGGGCCGGCGGCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508908.1
CDS GCA 90 bp ACTAGCGCGGCGGCCGCCGGCCCGCAATGGTGCTACCCTGGTTGCTaGTCGAGACTGCGCGCAGGGCGGTCCTCGGGTCCGCGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: TSAAAAGPQWCYPGC*SRLRAGRSSGPRRL
Trigger: CAGCCTCCGCGGACCCGAGGACCGCCCTGCGCGCAGTCTCGAGCAGCAACCAGGGTAGCACCATTGCGGGCCGGCGGCCGCCGCGCTAGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508908.1
CDS GCA 90 bp GTCACTAGCGCGGCGGCCGCCGGCCCGCAATGGTGCTACCCTGGTTaGTGCTCGAGACTGCGCGCAGGGCGGTCCTCGGGTCCGCGGAGG +
Preference number: 5 (lower is better)
Translates to: VTSAAAAGPQWCYPG*CSRLRAGRSSGPRR
Trigger: CCTCCGCGGACCCGAGGACCGCCCTGCGCGCAGTCTCGAGCAGCAACCAGGGTAGCACCATTGCGGGCCGGCGGCCGCCGCGCTAGTGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508908.1
CDS GCA 90 bp ATTTACCCGCCGGGCCGGGCCGCAGCGTCTACAACCTGGGGAGACTaGGCCTGCGCGCTCGTCCCGCTCCCGGCAGAGGTGGGGCCTCGT +
Preference number: 5 (lower is better)
Translates to: IYPPGRAAASTTWGD*ACALVPLPAEVGPR
Trigger: ACGAGGCCCCACCTCTGCCGGGAGCGGGACGAGCGCGCAGGCGCAGTCTCCCCAGGTTGTAGACGCTGCGGCCCGGCCCGGCGGGTAAAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329966.10
CDS CCA 90 bp GCATCTGTTATTTACCCGCCGGGCCGGGCCGCAGCGTCTACAACCTaGGGAGACTGCGCCTGCGCGCTCGTCCCGCTCCCGGCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: ASVIYPPGRAAASTT*GDCACALVPLPAEV
Trigger: CACCTCTGCCGGGAGCGGGACGAGCGCGCAGGCGCAGTCTCCCCAGGTTGTAGACGCTGCGGCCCGGCCCGGCGGGTAAATAACAGATGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329966.10
CDS GCA 90 bp GAGACTGCGCGCAGGGCGGTCCTCGGGTCCGCGGAGGCTGCGCTCTaGGGTGAGCTTGGTGGTCCCGGAGGCGTTGGGTCTAGAACTCAA +
Preference number: 5 (lower is better)
Translates to: ETARRAVLGSAEAAL*GELGGPGGVGSRTQ
Trigger: TTGAGTTCTAGACCCAACGCCTCCGGGACCACCAAGCTCACCGCAGAGCGCAGCCTCCGCGGACCCGAGGACCGCCCTGCGCGCAGTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508908.1
CDS TCA 90 bp CCAACACACACACACCCCGAGGATGTGAAGAGAAATGCGCCGCGATaGGGCGGACGGAAAGGTGTGGGGCCGCCGCGCGCCCAGGTCACC +
Preference number: 5 (lower is better)
Translates to: PTHTHPEDVKRNAPR*GGRKGVGPPRAQVT
Trigger: GGTGACCTGGGCGCGCGGCGGCCCCACACCTTTCCGTCCGCCTCATCGCGGCGCATTTCTCTTCACATCCTCGGGGTGTGTGTGTGTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327681.10
ENST00000472914.6
CDS GCA 90 bp CCTCCGGTCACCAACACACACACACCCCGAGGATGTGAAGAGAAATaGGCCGCGATGAGGCGGACGGAAAGGTGTGGGGCCGCCGCGCGC +
Preference number: 5 (lower is better)
Translates to: PPVTNTHTPRGCEEK*AAMRRTERCGAAAR
Trigger: GCGCGCGGCGGCCCCACACCTTTCCGTCCGCCTCATCGCGGCGCATTTCTCTTCACATCCTCGGGGTGTGTGTGTGTTGGTGACCGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327681.10
ENST00000472914.6
CDS TCA 90 bp AGACAGGCTTCCTCCGGTCACCAACACACACACACCCCGAGGATGTaGAGAGAAATGCGCCGCGATGAGGCGGACGGAAAGGTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: RQASSGHQHTHTPRM*REMRRDEADGKVWG
Trigger: GCCCCACACCTTTCCGTCCGCCTCATCGCGGCGCATTTCTCTTCACATCCTCGGGGTGTGTGTGTGTTGGTGACCGGAGGAAGCCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327681.10
ENST00000472914.6
CDS-3UTR CAA 90 bp ACCAAGGCAGGTAGATCACTTGAGGTCATCAGGAGTTTGAGACCAGCCCAGCCAGAGGTCATCAGGAGTTaGAGACCAGCCCAGCCAACA +
Preference number: 5 (lower is better)
Translates to: TKAGRSLEVIRSLRPAQPEVIRS*RPAQPT
Trigger: TGTTGGCTGGGCTGGTCTCAAACTCCTGATGACCTC...TGGCTGGGCTGGTCTCAAACTCCTGATGACCTCAAGTGATCTACCTGCCTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496090.6
ENST00000506871.5
ENST00000511403.5
CDS-3UTR CAA 90 bp ACCAAGGCAGGTAGATCACTTGAGGTCATCAGGAGTTTGAGACCAGCCCAGCCATCACCGTGGAGATCTTaGTTTCTTCTGTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: TKAGRSLEVIRSLRPAQPSPWRS*FLLSSL
Trigger: CAGTGAGGACAGAAGAAACAAAGATCTCCACGGTGA...TGGCTGGGCTGGTCTCAAACTCCTGATGACCTCAAGTGATCTACCTGCCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511403.5
CDS-3UTR CAA 90 bp ACCAAGGCAGGTAGATCACTTGAGGTCATCAGGAGTTTGAGACCAGCCCAGCCACTCCTGACTGTCCTGTaGCTGGAAATCTTTAAATCG +
Preference number: 5 (lower is better)
Translates to: TKAGRSLEVIRSLRPAQPLLTVL*LEIFKS
Trigger: CGATTTAAAGATTTCCAGCAACAGGACAGTCAGGAG...TGGCTGGGCTGGTCTCAAACTCCTGATGACCTCAAGTGATCTACCTGCCTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506871.5
ENST00000511403.5
CDS-3UTR CAA 90 bp TGGAGGGTGTTCTCACTTTCACATAAGCAGTGTAGTGGCCTTCTCTCATCGAGCCCACTGTCAGTCTCCTaGGTGTACAGCAGTTTACCT +
Preference number: 5 (lower is better)
Translates to: WRVFSLSHKQCSGLLSSSPLSVS*VYSSLP
Trigger: AGGTAAACTGCTGTACACCAAGGAGACTGACAGTGG...GCTCGATGAGAGAAGGCCACTACACTGCTTATGTGAAAGTGAGAACACCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR CAA 90 bp CTAACATGGACCCACTGGCCTGCTGATTCATTATCAGCCGCTTTCAAACCAGGCCTCCTGACTGTCCTGTaGCTGGAAATCTTTAAATCG +
Preference number: 5 (lower is better)
Translates to: LTWTHWPADSLSAAFKPGLLTVL*LEIFKS
Trigger: CGATTTAAAGATTTCCAGCAACAGGACAGTCAGGAG...GCCTGGTTTGAAAGCGGCTGATAATGAATCAGCAGGCCAGTGGGTCCATGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR CAA 90 bp ACCAAGGCAGGTAGATCACTTGAGGTCATCAGGAGTTTGAGACCAGCCCAGCCACTTGGCAGCTCTAGGTaGATGAATATTTTCTATAGT +
Preference number: 5 (lower is better)
Translates to: TKAGRSLEVIRSLRPAQPLGSSR*MNIFYS
Trigger: ACTATAGAAAATATTCATCAACCTAGAGCTGCCAAG...TGGCTGGGCTGGTCTCAAACTCCTGATGACCTCAAGTGATCTACCTGCCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000496090.6
ENST00000506871.5
ENST00000511403.5
CDS-3UTR CAA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGCCACTGTCAGTCTCCTaGGTGTACAGCAGTTTACCT +
Preference number: 5 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERPLSVS*VYSSLP
Trigger: AGGTAAACTGCTGTACACCAAGGAGACTGACAGTGG...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS CCA 90 bp CAATGGGGCTCTGTTCTGGAACTCTTAAAGTGCTTCAATGAATGTTaGCTTTCTGAGTTTTTACCACATCCCTGGAAGCCACACTTGAGG +
Preference number: 5 (lower is better)
Translates to: QWGSVLELLKCFNEC*LSEFLPHPWKPHLR
Trigger: CCTCAAGTGTGGCTTCCAGGGATGTGGTAAAAACTCAGAAAGCCAACATTCATTGAAGCACTTTAAGAGTTCCAGAACAGAGCCCCATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000327681.10
ENST00000329966.10
ENST00000369232.2
ENST00000369233.6
ENST00000472914.6
ENST00000496518.6
ENST00000500704.7
ENST00000506871.5
CDS-3UTR CAA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGCTGTCAGCATCAACATaGCTTTCAGAATGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERLSAST*LSEWLA
Trigger: AGCCAGCCATTCTGAAAGCAATGTTGATGCTGACAG...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAACCACTGTCAGTCTCCTaGGTGTACAGCAGTTTACCT +
Preference number: 5 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEPLSVS*VYSSLP
Trigger: AGGTAAACTGCTGTACACCAAGGAGACTGACAGTGG...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGCTCCTGACTGTCCTGTaGCTGGAAATCTTTAAATCG +
Preference number: 5 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERLLTVL*LEIFKS
Trigger: CGATTTAAAGATTTCCAGCAACAGGACAGTCAGGAG...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAACTGTCAGCATCAACATaGCTTTCAGAATGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLELSAST*LSEWLA
Trigger: AGCCAGCCATTCTGAAAGCAATGTTGATGCTGACAG...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTCATCTATATTGGGCCTaGGCCAACCACCTGCAAGTT +
Preference number: 5 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTHLYWA*ANHLQV
Trigger: AACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATG...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAACATCTATATTGGGCCTaGGCCAACCACCTGCAAGTT +
Preference number: 5 (lower is better)
Translates to: PCLANKLIPTITLLSYLKHLYWA*ANHLQV
Trigger: AACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATG...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp TGCCACTGTATCGATCATGATCTGTCTCCCGTAAACTTCTATATTTATTCATTCGAGGTCATCAGGAGTTaGAGACCAGCCCAGCCAACA +
Preference number: 5 (lower is better)
Translates to: CHCIDHDLSPVNFYIYSFEVIRS*RPAQPT
Trigger: TGTTGGCTGGGCTGGTCTCAAACTCCTGATGACCTC...GAATGAATAAATATAGAAGTTTACGGGAGACAGATCATGATCGATACAGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR CAA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAACTCCTGACTGTCCTGTaGCTGGAAATCTTTAAATCG +
Preference number: 5 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLELLTVL*LEIFKS
Trigger: CGATTTAAAGATTTCCAGCAACAGGACAGTCAGGAG...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp CCATATGCAGCACTCTCTTCAATAAACGGTTTATTTGCAGGAGTCTTTGGAGCACTCCTGACTGTCCTGTaGCTGGAAATCTTTAAATCG +
Preference number: 5 (lower is better)
Translates to: PYAALSSINGLFAGVFGALLTVL*LEIFKS
Trigger: CGATTTAAAGATTTCCAGCAACAGGACAGTCAGGAG...TGCTCCAAAGACTCCTGCAAATAAACCGTTTATTGAAGAGAGTGCTGCATATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR CAA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGGGTCTGAAAAGCATTTaGGGGACTATAAGACCTCAA +
Preference number: 5 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERGLKSI*GTIRPQ
Trigger: TTGAGGTCTTATAGTCCCCAAAATGCTTTTCAGACC...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGCATCTATATTGGGCCTaGGCCAACCACCTGCAAGTT +
Preference number: 5 (lower is better)
Translates to: KYFHTLSAATILILSSQEHLYWA*ANHLQV
Trigger: AACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATG...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp TCAAGCCAGCCTGATGAAATCTTTTCAGGTGGAGAATTAGGACAGCTGGAACAGCTGCACTATCATTCATaGGCACTAATGATTAGGATG +
Preference number: 5 (lower is better)
Translates to: SSQPDEIFSGGELGQLEQLHYHS*ALMIRM
Trigger: CATCCTAATCATTAGTGCCAATGAATGATAGTGCAG...CTGTTCCAGCTGTCCTAATTCTCCACCTGAAAAGATTTCATCAGGCTGGCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR CAA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAGCATTTACCTGGCACTaGCCTGCACTATCATTCATT +
Preference number: 5 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEAFTWH*PALSFI
Trigger: AATGAATGATAGTGCAGGCAAGTGCCAGGTAAATGC...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS TCA 90 bp CTAAATCCTCGGAATTTCCAGAGCGACAAGAGTGTCTGTTATTCATaGTGGGTCCCTCAGGCCACATTTGACAGTTTATATCAACAAACT +
Preference number: 5 (lower is better)
Translates to: LNPRNFQSDKSVCYS*WVPQATFDSLYQQT
Trigger: AGTTTGTTGATATAAACTGTCAAATGTGGCCTGAGGGACCCATCATGAATAACAGACACTCTTGTCGCTCTGGAAATTCCGAGGATTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369232.2
CDS-3UTR CAA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAGGCCTTTTACTTCTTTaGGCTTTCTCAGGTAAAGCT +
Preference number: 5 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEGLLLL*AFSGKA
Trigger: AGCTTTACCTGAGAAAGCCAAAAGAAGTAAAAGGCC...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000500704.7
CDS-3UTR CAA 90 bp TCAAGCCAGCCTGATGAAATCTTTTCAGGTGGAGAATTAGGACAGCTGGAACAGACAGATTCTCAGCTATaGCTCTCTTTACATGATTCA +
Preference number: 5 (lower is better)
Translates to: SSQPDEIFSGGELGQLEQTDSQL*LSLHDS
Trigger: TGAATCATGTAAAGAGAGCAATAGCTGAGAATCTGT...CTGTTCCAGCTGTCCTAATTCTCCACCTGAAAAGATTTCATCAGGCTGGCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR CAA 90 bp ATTTTCTCTGTCAAAATCTTGATCTCCAGTTACAGTGCTGCTCAAACGAAGTTCCTGTCAGCATCAACATaGCTTTCAGAATGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: IFSVKILISSYSAAQTKFLSAST*LSEWLA
Trigger: AGCCAGCCATTCTGAAAGCAATGTTGATGCTGACAG...GAACTTCGTTTGAGCAGCACTGTAACTGGAGATCAAGATTTTGACAGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR CAA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGAAAGTTCAGGACCATTaGAGGAACATGCTATTCCTA +
Preference number: 5 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERKVQDH*RNMLFL
Trigger: TAGGAATAGCATGTTCCTCAAATGGTCCTGAACTTT...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGGGCCTTTTACTTCTTTaGGCTTTCTCAGGTAAAGCT +
Preference number: 5 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRGLLLL*AFSGKA
Trigger: AGCTTTACCTGAGAAAGCCAAAAGAAGTAAAAGGCC...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327681.10
ENST00000500704.7
CDS-3UTR CAA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTGGTCTGAAAAGCATTTaGGGGACTATAAGACCTCAA +
Preference number: 5 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTGLKSI*GTIRPQ
Trigger: TTGAGGTCTTATAGTCCCCAAAATGCTTTTCAGACC...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAAAGTTCAGGACCATTaGAGGAACATGCTATTCCTA +
Preference number: 5 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLEKVQDH*RNMLFL
Trigger: TAGGAATAGCATGTTCCTCAAATGGTCCTGAACTTT...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp TCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAAGGAATTCTGGGAAGTTTTaGTACCCCAGAATAAATACC +
Preference number: 5 (lower is better)
Translates to: SGPFEEHAIPTEEGRLERNSGKF*YPRINT
Trigger: GGTATTTATTCTGGGGTACAAAAACTTCCCAGAATT...CCTTTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGCATTTACCTGGCACTaGCCTGCACTATCATTCATT +
Preference number: 5 (lower is better)
Translates to: KYFHTLSAATILILSSQEAFTWH*PALSFI
Trigger: AATGAATGATAGTGCAGGCAAGTGCCAGGTAAATGC...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAATGCCTGGCTAACAAATaGATACCAACTATCACTCTT +
Preference number: 5 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLECLANK*IPTITL
Trigger: AAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCA...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp ATGCTTCTTGGCAGCTCTAGGTTGATGAATATTTTCTATAGTAACATTGCCACTTCACCGTGGAGATCTTaGTTTCTTCTGTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: MLLGSSRLMNIFYSNIATSPWRS*FLLSSL
Trigger: CAGTGAGGACAGAAGAAACAAAGATCTCCACGGTGA...AGTGGCAATGTTACTATAGAAAATATTCATCAACCTAGAGCTGCCAAGAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR CAA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGGCCTTTTACTTCTTTaGGCTTTCTCAGGTAAAGCT +
Preference number: 5 (lower is better)
Translates to: KYFHTLSAATILILSSQEGLLLL*AFSGKA
Trigger: AGCTTTACCTGAGAAAGCCAAAAGAAGTAAAAGGCC...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327681.10
ENST00000500704.7
CDS-3UTR CAA 90 bp TTTCTCACTTTATGGTATTACAACATAGGCATCCAAGTCAGGACAGATCTCCATGGCCTTTTACTTCTTTaGGCTTTCTCAGGTAAAGCT +
Preference number: 5 (lower is better)
Translates to: FLTLWYYNIGIQVRTDLHGLLLL*AFSGKA
Trigger: AGCTTTACCTGAGAAAGCCAAAAGAAGTAAAAGGCC...ATGGAGATCTGTCCTGACTTGGATGCCTATGTTGTAATACCATAAAGTGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329966.10
CDS-3UTR CAA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAACAGATTCTCAGCTATaGCTCTCTTTACATGATTCA +
Preference number: 5 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLETDSQL*LSLHDS
Trigger: TGAATCATGTAAAGAGAGCAATAGCTGAGAATCTGT...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp CCATATGCAGCACTCTCTTCAATAAACGGTTTATTTGCAGGAGTCTTTGGAGCAACAGATTCTCAGCTATaGCTCTCTTTACATGATTCA +
Preference number: 5 (lower is better)
Translates to: PYAALSSINGLFAGVFGATDSQL*LSLHDS
Trigger: TGAATCATGTAAAGAGAGCAATAGCTGAGAATCTGT...TGCTCCAAAGACTCCTGCAAATAAACCGTTTATTGAAGAGAGTGCTGCATATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS-3UTR CAA 90 bp TGCCACTGTATCGATCATGATCTGTCTCCCGTAAACTTCTATATTTATTCATTCCTCCTGACTGTCCTGTaGCTGGAAATCTTTAAATCG +
Preference number: 5 (lower is better)
Translates to: CHCIDHDLSPVNFYIYSFLLTVL*LEIFKS
Trigger: CGATTTAAAGATTTCCAGCAACAGGACAGTCAGGAG...GAATGAATAAATATAGAAGTTTACGGGAGACAGATCATGATCGATACAGTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496518.6
ENST00000506871.5
ENST00000507717.5
CDS-3UTR CAA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAACTTGGCAGCTCTAGGTaGATGAATATTTTCTATAGT +
Preference number: 5 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLELGSSR*MNIFYS
Trigger: ACTATAGAAAATATTCATCAACCTAGAGCTGCCAAG...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGAAAGTTCAGGACCATTaGAGGAACATGCTATTCCTA +
Preference number: 5 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRKVQDH*RNMLFL
Trigger: TAGGAATAGCATGTTCCTCAAATGGTCCTGAACTTT...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGCTGCACTATCATTCATaGGCACTAATGATTAGGATG +
Preference number: 5 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRLHYHS*ALMIRM
Trigger: CATCCTAATCATTAGTGCCAATGAATGATAGTGCAG...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp TGCCACTGTATCGATCATGATCTGTCTCCCGTAAACTTCTATATTTATTCATTCGCATTTACCTGGCACTaGCCTGCACTATCATTCATT +
Preference number: 5 (lower is better)
Translates to: CHCIDHDLSPVNFYIYSFAFTWH*PALSFI
Trigger: AATGAATGATAGTGCAGGCAAGTGCCAGGTAAATGC...GAATGAATAAATATAGAAGTTTACGGGAGACAGATCATGATCGATACAGTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR CAA 90 bp AGTTCAGGACCATTTGAGGAACATGCTATTCCTACAGAAGAGGGAAGACTAGAAACCAAGATGGCTGACTaGAATAAAGACAGTCAATAT +
Preference number: 5 (lower is better)
Translates to: SSGPFEEHAIPTEEGRLETKMAD*NKDSQY
Trigger: ATATTGACTGTCTTTATTCAAGTCAGCCATCTTGGT...TTCTAGTCTTCCCTCTTCTGTAGGAATAGCATGTTCCTCAAATGGTCCTGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGTGCCTGGCTAACAAATaGATACCAACTATCACTCTT +
Preference number: 5 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRCLANK*IPTITL
Trigger: AAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCA...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp GAGCCATTTAATTTCTGTGTCTCCATTTCCTTATATATGAGGATAAGCTGCTTCGGCCTTTTACTTCTTTaGGCTTTCTCAGGTAAAGCT +
Preference number: 5 (lower is better)
Translates to: EPFNFCVSISLYMRISCFGLLLL*AFSGKA
Trigger: AGCTTTACCTGAGAAAGCCAAAAGAAGTAAAAGGCC...GAAGCAGCTTATCCTCATATATAAGGAAATGGAGACACAGAAATTAAATGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329966.10
ENST00000472914.6
CDS-3UTR CAA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGACAGATTCTCAGCTATaGCTCTCTTTACATGATTCA +
Preference number: 5 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRTDSQL*LSLHDS
Trigger: TGAATCATGTAAAGAGAGCAATAGCTGAGAATCTGT...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp GTTATAATCATCTATATTGGGCCTTGGCCAACCACCTGCAAGTTATCCTTAACTCTTGGCAGCTCTAGGTaGATGAATATTTTCTATAGT +
Preference number: 5 (lower is better)
Translates to: VIIIYIGPWPTTCKLSLTLGSSR*MNIFYS
Trigger: ACTATAGAAAATATTCATCAACCTAGAGCTGCCAAG...AGTTAAGGATAACTTGCAGGTGGTTGGCCAAGGCCCAATATAGATGATTATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp AATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGGCAGCACTGGTAACCTaGATAACATTATATATGCTT +
Preference number: 5 (lower is better)
Translates to: NISIPYLQPLFLSFLPRRAALVT*ITLYML
Trigger: AAGCATATATAATGTTATCAAGGTTACCAGTGCTGC...CCTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp CCATGCCTGGCTAACAAATTGATACCAACTATCACTCTTCTCAGCTACCTAAAAACCAAGATGGCTGACTaGAATAAAGACAGTCAATAT +
Preference number: 5 (lower is better)
Translates to: PCLANKLIPTITLLSYLKTKMAD*NKDSQY
Trigger: ATATTGACTGTCTTTATTCAAGTCAGCCATCTTGGT...TTTTAGGTAGCTGAGAAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp ATTTTCTCTGTCAAAATCTTGATCTCCAGTTACAGTGCTGCTCAAACGAAGTTCTGCCTGGCTAACAAATaGATACCAACTATCACTCTT +
Preference number: 5 (lower is better)
Translates to: IFSVKILISSYSAAQTKFCLANK*IPTITL
Trigger: AAGAGTGATAGTTGGTATCAATTTGTTAGCCAGGCA...GAACTTCGTTTGAGCAGCACTGTAACTGGAGATCAAGATTTTGACAGAGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS GCA 90 bp AGATTAATTATAATACAATGGGGCTCTGTTCTGGAACTCTTAAAGTaGTTCAATGAATGTTGGCTTTCTGAGTTTTTACCACATCCCTGG +
Preference number: 5 (lower is better)
Translates to: RLIIIQWGSVLELLK*FNECWLSEFLPHPW
Trigger: CCAGGGATGTGGTAAAAACTCAGAAAGCCAACATTCATTGAAGCACTTTAAGAGTTCCAGAACAGAGCCCCATTGTATTATAATTAATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000327681.10
ENST00000329966.10
ENST00000369232.2
ENST00000369233.6
ENST00000472914.6
ENST00000496518.6
ENST00000500704.7
ENST00000506871.5
CDS-3UTR CAA 90 bp AAATATTTCCATACCTTATCTGCAGCCACTATTCTTATCCTTTCTTCCCAGGAGGCAGCACTGGTAACCTaGATAACATTATATATGCTT +
Preference number: 5 (lower is better)
Translates to: KYFHTLSAATILILSSQEAALVT*ITLYML
Trigger: AAGCATATATAATGTTATCAAGGTTACCAGTGCTGC...CTCCTGGGAAGAAAGGATAAGAATAGTGGCTGCAGATAAGGTATGGAAATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327681.10
ENST00000496518.6
ENST00000500704.7
CDS-3UTR CAA 90 bp CTTCATAGTCAGGGCAATAAGAGCAAAGTTACAGTAAAAACGACTATTCATGTTAGGACAGATCTCCATTaGATTCTCAGCTTTTCACTC +
Preference number: 5 (lower is better)
Translates to: LHSQGNKSKVTVKTTIHVRTDLH*ILSFSL
Trigger: GAGTGAAAAGCTGAGAATCAAATGGAGATCTGTCCT...AACATGAATAGTCGTTTTTACTGTAACTTTGCTCTTATTGCCCTGACTATGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329966.10
CDS-3UTR CAA 90 bp TATGGTTTTCTCACTTTATGGTATTACAACATAGGCATCCAAGTCAGGACAGATACAGATTCTCAGCTATaGCTCTCTTTACATGATTCA +
Preference number: 5 (lower is better)
Translates to: YGFLTLWYYNIGIQVRTDTDSQL*LSLHDS
Trigger: TGAATCATGTAAAGAGAGCAATAGCTGAGAATCTGT...ATCTGTCCTGACTTGGATGCCTATGTTGTAATACCATAAAGTGAGAAAACCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329966.10
CDS-3UTR CAA 90 bp GAGCCATTTAATTTCTGTGTCTCCATTTCCTTATATATGAGGATAAGCTGCTTCACAGATTCTCAGCTATaGCTCTCTTTACATGATTCA +
Preference number: 5 (lower is better)
Translates to: EPFNFCVSISLYMRISCFTDSQL*LSLHDS
Trigger: TGAATCATGTAAAGAGAGCAATAGCTGAGAATCTGT...GAAGCAGCTTATCCTCATATATAAGGAAATGGAGACACAGAAATTAAATGGCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329966.10
ENST00000472914.6
CDS-3UTR CAA 90 bp ATGCTTCTTGGCAGCTCTAGGTTGATGAATATTTTCTATAGTAACATTGCCACTCTTGGCAGCTCTAGGTaGATGAATATTTTCTATAGT +
Preference number: 5 (lower is better)
Translates to: MLLGSSRLMNIFYSNIATLGSSR*MNIFYS
Trigger: ACTATAGAAAATATTCATCAACCTAGAGCTGCCAAG...AGTGGCAATGTTACTATAGAAAATATTCATCAACCTAGAGCTGCCAAGAAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496518.6
ENST00000506871.5
CDS-3UTR CAA 90 bp TGCCACTGTATCGATCATGATCTGTCTCCCGTAAACTTCTATATTTATTCATTCACCAAGATGGCTGACTaGAATAAAGACAGTCAATAT +
Preference number: 5 (lower is better)
Translates to: CHCIDHDLSPVNFYIYSFTKMAD*NKDSQY
Trigger: ATATTGACTGTCTTTATTCAAGTCAGCCATCTTGGT...GAATGAATAAATATAGAAGTTTACGGGAGACAGATCATGATCGATACAGTGGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS-3UTR CAA 90 bp GAGCCATTTAATTTCTGTGTCTCCATTTCCTTATATATGAGGATAAGCTGCTTCTCACTTAAACTCTATTaGCCTCACAGCTCATCTTTT +
Preference number: 5 (lower is better)
Translates to: EPFNFCVSISLYMRISCFSLKLY*PHSSSF
Trigger: AAAAGATGAGCTGTGAGGCAAATAGAGTTTAAGTGA...GAAGCAGCTTATCCTCATATATAAGGAAATGGAGACACAGAAATTAAATGGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329966.10
CDS-3UTR CAA 90 bp GAAATATCAATGAATGGATCTTTCACCGTGGAGATATTTGCACATTCTTCACACTATTTGCAGGAGTCTTaGGAGCACTTAAACATTTTG +
Preference number: 5 (lower is better)
Translates to: EISMNGSFTVEIFAHSSHYLQES*EHLNIL
Trigger: CAAAATGTTTAAGTGCTCCAAAGACTCCTGCAAATA...GTGTGAAGAATGTGCAAATATCTCCACGGTGAAAGATCCATTCATTGATATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506871.5
CDS GCA 72 bp GCGGCCGCCGGCCCGCAATGGTGCTACCCTGGTTGCTaGTCGAGACTGCGCGCAGGGCGGTCCTCGGGTCCG +
Preference number: 6 (lower is better)
Translates to: AAAGPQWCYPGC*SRLRAGRSSGP
Trigger: CGGACCCGAGGACCGCCCTGCGCGCAGTCTCGAGCAGCAACCAGGGTAGCACCATTGCGGGCCGGCGGCCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508908.1
CDS GCA 72 bp CGCAGGGCGGTCCTCGGGTCCGCGGAGGCTGCGCTCTaGGGTGAGCTTGGTGGTCCCGGAGGCGTTGGGTCT +
Preference number: 6 (lower is better)
Translates to: RRAVLGSAEAAL*GELGGPGGVGS
Trigger: AGACCCAACGCCTCCGGGACCACCAAGCTCACCGCAGAGCGCAGCCTCCGCGGACCCGAGGACCGCCCTGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508908.1
CDS CCA 72 bp ATTTACCCGCCGGGCCGGGCCGCAGCGTCTACAACCTaGGGAGACTGCGCCTGCGCGCTCGTCCCGCTCCCG +
Preference number: 6 (lower is better)
Translates to: IYPPGRAAASTT*GDCACALVPLP
Trigger: CGGGAGCGGGACGAGCGCGCAGGCGCAGTCTCCCCAGGTTGTAGACGCTGCGGCCCGGCCCGGCGGGTAAAT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329966.10
CDS GCA 72 bp GCCCGCAATGGTGCTACCCTGGTTGCTGCTCGAGACTaGGCGCAGGGCGGTCCTCGGGTCCGCGGAGGCTGC +
Preference number: 6 (lower is better)
Translates to: ARNGATLVAARD*AQGGPRVRGGC
Trigger: GCAGCCTCCGCGGACCCGAGGACCGCCCTGCGCGCAGTCTCGAGCAGCAACCAGGGTAGCACCATTGCGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508908.1
CDS GCA 72 bp GTGGTCACTAGCGCGGCGGCCGCCGGCCCGCAATGGTaGTACCCTGGTTGCTGCTCGAGACTGCGCGCAGGG +
Preference number: 6 (lower is better)
Translates to: VVTSAAAAGPQW*YPGCCSRLRAG
Trigger: CCCTGCGCGCAGTCTCGAGCAGCAACCAGGGTAGCACCATTGCGGGCCGGCGGCCGCCGCGCTAGTGACCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508908.1
CDS CCA 72 bp AGAGAAATGCGCCGCGATGAGGCGGACGGAAAGGTGTaGGGCCGCCGCGCGCCCAGGTCACCAGGGGACTCG +
Preference number: 6 (lower is better)
Translates to: REMRRDEADGKV*GRRAPRSPGDS
Trigger: CGAGTCCCCTGGTGACCTGGGCGCGCGGCGGCCCCACACCTTTCCGTCCGCCTCATCGCGGCGCATTTCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327681.10
ENST00000472914.6
CDS CCA 72 bp GAAGTGGTCACTAGCGCGGCGGCCGCCGGCCCGCAATaGTGCTACCCTGGTTGCTGCTCGAGACTGCGCGCA +
Preference number: 6 (lower is better)
Translates to: EVVTSAAAAGPQ*CYPGCCSRLRA
Trigger: TGCGCGCAGTCTCGAGCAGCAACCAGGGTAGCACCATTGCGGGCCGGCGGCCGCCGCGCTAGTGACCACTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508908.1
CDS TCA 72 bp ACACACCCCGAGGATGTGAAGAGAAATGCGCCGCGATaGGGCGGACGGAAAGGTGTGGGGCCGCCGCGCGCC +
Preference number: 6 (lower is better)
Translates to: THPEDVKRNAPR*GGRKGVGPPRA
Trigger: GGCGCGCGGCGGCCCCACACCTTTCCGTCCGCCTCATCGCGGCGCATTTCTCTTCACATCCTCGGGGTGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327681.10
ENST00000472914.6
CDS CCA 72 bp GAAGTGACTTGCAGAGGTCCCAAAGCCAGTAAGCGGTaGATGGAGATGCGGACCCAAGCAGTCCGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: EVTCRGPKASKR*MEMRTQAVRPR
Trigger: CCGGGGCCGGACTGCTTGGGTCCGCATCTCCATCCACCGCTTACTGGCTTTGGGACCTCTGCAAGTCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327681.10
ENST00000472914.6
CDS GCA 72 bp ACCAACACACACACACCCCGAGGATGTGAAGAGAAATaGGCCGCGATGAGGCGGACGGAAAGGTGTGGGGCC +
Preference number: 6 (lower is better)
Translates to: TNTHTPRGCEEK*AAMRRTERCGA
Trigger: GGCCCCACACCTTTCCGTCCGCCTCATCGCGGCGCATTTCTCTTCACATCCTCGGGGTGTGTGTGTGTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327681.10
ENST00000472914.6
CDS TCA 72 bp TCCTCCGGTCACCAACACACACACACCCCGAGGATGTaGAGAGAAATGCGCCGCGATGAGGCGGACGGAAAG +
Preference number: 6 (lower is better)
Translates to: SSGHQHTHTPRM*REMRRDEADGK
Trigger: CTTTCCGTCCGCCTCATCGCGGCGCATTTCTCTTCACATCCTCGGGGTGTGTGTGTGTTGGTGACCGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327681.10
ENST00000472914.6
CDS CAA 72 bp GAAACAGGAACAAGGCTGAGGTCAGTGGTCCAGGCCTaGAAAGTTCCACCACCAATGGGTCCAGCTGAGAGT +
Preference number: 6 (lower is better)
Translates to: ETGTRLRSVVQA*KVPPPMGPAES
Trigger: ACTCTCAGCTGGACCCATTGGTGGTGGAACTTTCAAGGCCTGGACCACTGACCTCAGCCTTGTTCCTGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327681.10
ENST00000329966.10
ENST00000369233.6
ENST00000472914.6
ENST00000500704.7
ENST00000506871.5
ENST00000507717.5
CDS CAA 90 bp TGCTGTGAAGAAACAGGAACAAGGCTGAGGTCAGTGGTCCAGGCCTaGAAAGTTCCACCACCAATGGGTCCAGCTGAGAGTCTGAGGAAG +
Preference number: 6 (lower is better)
Translates to: CCEETGTRLRSVVQA*KVPPPMGPAESLRK
Trigger: CTTCCTCAGACTCTCAGCTGGACCCATTGGTGGTGGAACTTTCAAGGCCTGGACCACTGACCTCAGCCTTGTTCCTGTTTCTTCACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327681.10
ENST00000329966.10
ENST00000369233.6
ENST00000472914.6
ENST00000500704.7
ENST00000506871.5
ENST00000507717.5
CDS CAA 90 bp CCTCACTGCATCCAGAAGATAATGAAGAAGCTCCTGACTGTCCTGTaGCTGGAAATCTTTAAATCGAGGTGCCCAGCTGAGAGTCTGAGG +
Preference number: 6 (lower is better)
Translates to: PHCIQKIMKKLLTVL*LEIFKSRCPAESLR
Trigger: CCTCAGACTCTCAGCTGGGCACCTCGATTTAAAGATTTCCAGCAACAGGACAGTCAGGAGCTTCTTCATTATCTTCTGGATGCAGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS CCA 72 bp AATAAAGGATCTGGCTGGCTTTTCTCCCCAGGTTCCTaGGAAGTACCCTCTAAATCCTCGGAATTTCCAGAG +
Preference number: 6 (lower is better)
Translates to: NKGSGWLFSPGS*EVPSKSSEFPE
Trigger: CTCTGGAAATTCCGAGGATTTAGAGGGTACTTCCCAGGAACCTGGGGAGAAAAGCCAGCCAGATCCTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369232.2
CDS CAA 90 bp GCGACAAGAGTGTCTGTTATTCATGATGGGTCCCTCAGGCCACATTaGACAGTTTATATCAACAAACTGACTCACTGTGGGCCCCTAGAC +
Preference number: 6 (lower is better)
Translates to: ATRVSVIHDGSLRPH*TVYINKLTHCGPLD
Trigger: GTCTAGGGGCCCACAGTGAGTCAGTTTGTTGATATAAACTGTCAAATGTGGCCTGAGGGACCCATCATGAATAACAGACACTCTTGTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369232.2
CDS GCA 72 bp TTACACTTGAAACTGAGAAAGAGAAGTGAAGTGACTTaGAGAGGTCCCAAAGCCAGTAAGCGGTGGATGGAG +
Preference number: 6 (lower is better)
Translates to: LHLKLRKRSEVT*RGPKASKRWME
Trigger: CTCCATCCACCGCTTACTGGCTTTGGGACCTCTGCAAGTCACTTCACTTCTCTTTCTCAGTTTCAAGTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327681.10
ENST00000472914.6
CDS CAA 72 bp ATCCAGAAGATAATGAAGAAGCTCCTGACTGTCCTGTaGCTGGAAATCTTTAAATCGAGGTGCCCAGCTGAG +
Preference number: 6 (lower is better)
Translates to: IQKIMKKLLTVL*LEIFKSRCPAE
Trigger: CTCAGCTGGGCACCTCGATTTAAAGATTTCCAGCAACAGGACAGTCAGGAGCTTCTTCATTATCTTCTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496518.6
CDS CAA 90 bp CCTCACTGCATCCAGAAGATAATGAAGAAGCTCCTGACTGTCCTGTaGCTGGAAATCTTTAAATCGAGGTGCCTTCTGACAAAGCTGATT +
Preference number: 6 (lower is better)
Translates to: PHCIQKIMKKLLTVL*LEIFKSRCLLTKLI
Trigger: AATCAGCTTTGTCAGAAGGCACCTCGATTTAAAGATTTCCAGCAACAGGACAGTCAGGAGCTTCTTCATTATCTTCTGGATGCAGTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000500704.7
ENST00000506871.5
ENST00000507717.5
ENST00000511403.5
CDS TCA 72 bp CGGAATTTCCAGAGCGACAAGAGTGTCTGTTATTCATaGTGGGTCCCTCAGGCCACATTTGACAGTTTATAT +
Preference number: 6 (lower is better)
Translates to: RNFQSDKSVCYS*WVPQATFDSLY
Trigger: ATATAAACTGTCAAATGTGGCCTGAGGGACCCATCATGAATAACAGACACTCTTGTCGCTCTGGAAATTCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369232.2
CDS CAA 72 bp GTGTCTGTTATTCATGATGGGTCCCTCAGGCCACATTaGACAGTTTATATCAACAAACTGACTCACTGTGGG +
Preference number: 6 (lower is better)
Translates to: VSVIHDGSLRPH*TVYINKLTHCG
Trigger: CCCACAGTGAGTCAGTTTGTTGATATAAACTGTCAAATGTGGCCTGAGGGACCCATCATGAATAACAGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369232.2
CDS CAA 72 bp ATCCAGAAGATAATGAAGAAGCTCCTGACTGTCCTGTaGCTGGAAATCTTTAAATCGAGGTGCCTTCTGACA +
Preference number: 6 (lower is better)
Translates to: IQKIMKKLLTVL*LEIFKSRCLLT
Trigger: TGTCAGAAGGCACCTCGATTTAAAGATTTCCAGCAACAGGACAGTCAGGAGCTTCTTCATTATCTTCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000500704.7
ENST00000506871.5
ENST00000507717.5
ENST00000511403.5
CDS CCA 72 bp TCTGTTCTGGAACTCTTAAAGTGCTTCAATGAATGTTaGCTTTCTGAGTTTTTACCACATCCCTGGAAGCCA +
Preference number: 6 (lower is better)
Translates to: SVLELLKCFNEC*LSEFLPHPWKP
Trigger: TGGCTTCCAGGGATGTGGTAAAAACTCAGAAAGCCAACATTCATTGAAGCACTTTAAGAGTTCCAGAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000327681.10
ENST00000329966.10
ENST00000369232.2
ENST00000369233.6
ENST00000472914.6
ENST00000496518.6
ENST00000500704.7
ENST00000506871.5
CDS GCA 72 bp ATAATACAATGGGGCTCTGTTCTGGAACTCTTAAAGTaGTTCAATGAATGTTGGCTTTCTGAGTTTTTACCA +
Preference number: 6 (lower is better)
Translates to: IIQWGSVLELLK*FNECWLSEFLP
Trigger: TGGTAAAAACTCAGAAAGCCAACATTCATTGAAGCACTTTAAGAGTTCCAGAACAGAGCCCCATTGTATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000327681.10
ENST00000329966.10
ENST00000369232.2
ENST00000369233.6
ENST00000472914.6
ENST00000496518.6
ENST00000500704.7
ENST00000506871.5
CDS CAA 72 bp TTTCTAGTTTCATCATCAGCAGTTTTAGTAGTTGGGTaGTTAAATGCTTTTAGAATGCTAGCTTGTATTCGC +
Preference number: 6 (lower is better)
Translates to: FLVSSSAVLVVG*LNAFRMLACIR
Trigger: GCGAATACAAGCTAGCATTCTAAAAGCATTTAACAACCCAACTACTAAAACTGCTGATGATGAAACTAGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327681.10
ENST00000369233.6
ENST00000496090.6
ENST00000500704.7
ENST00000506871.5
ENST00000507717.5