RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP43 (Homo sapiens)

Ensembl gene IDs: ENSG00000154914

Ensembl transcript IDs: ENST00000285199.12, ENST00000570475.5, ENST00000570827.6, ENST00000573955.1, ENST00000574408.5, ENST00000575346.1

Found 500 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATTACAAGACAACGGGTTTCCTGGAAACCCATTCTCAACATGAGCTaGCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACAC +
Preference number: 1 (lower is better)
Translates to: ITRQRVSWKPILNMS*LQLLGKVPRMPASH
Trigger: GTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGAATGGGTTTCCAGGAAACCCGTTGTCTTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR CCA 90 bp CAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTTaGGTTATATGGACCTTGGGTGTTGGAAGTCTAGATATGGAGACC +
Preference number: 1 (lower is better)
Translates to: QTVAKHPMMQEGFRP*VIWTLGVGSLDMET
Trigger: GGTCTCCATATCTAGACTTCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR CAA 90 bp CAACGGGTTTCCTGGAAACCCATTCTCAACATGAGCTGCCTACAGTaGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGAC +
Preference number: 2 (lower is better)
Translates to: QRVSWKPILNMSCLQ*LGKVPRMPASHNTD
Trigger: GTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGAATGGGTTTCCAGGAAACCCGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR-3UTR TCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAAACCCATTCTCAACATaGGCTGCCTACAGTTGCTTG +
Preference number: 2 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGNPFST*AAYSCL
Trigger: CAAGCAACTGTAGGCAGCTCATGTTGAGAATGGGTT...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCTGCCTACAGTTGCTTaGCAAAGTCCCAAGAATGCC +
Preference number: 2 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHLPTVA*QSPKNA
Trigger: GGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR CAA 90 bp CCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTaGGGTTATATGGACCTTGGGTGTTGGAAGTCTAGATATGGAGAC +
Preference number: 2 (lower is better)
Translates to: PNCSKAPNDAGRFST*GYMDLGCWKSRYGD
Trigger: GTCTCCATATCTAGACTTCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR-3UTR CCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTAGACAACGGGTTTCCTaGAAACCCATTCTCAACATG +
Preference number: 2 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGRQRVS*KPILNM
Trigger: CATGTTGAGAATGGGTTTCCAGGAAACCCGTTGTCT...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR-3UTR CCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAAGACAACGGGTTTCCTaGAAACCCATTCTCAACATG +
Preference number: 2 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGRQRVS*KPILNM
Trigger: CATGTTGAGAATGGGTTTCCAGGAAACCCGTTGTCT...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR-3UTR CCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTAGACAACGGGTTTCCTaGAAACCCATTCTCAACATG +
Preference number: 2 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPRQRVS*KPILNM
Trigger: CATGTTGAGAATGGGTTTCCAGGAAACCCGTTGTCT...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR-3UTR CAA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGGCTGCCTACAGTTGCTaGGCAAAGTCCCAAGAATGC +
Preference number: 3 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWAAYSC*AKSQEC
Trigger: GCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGC...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR-3UTR CAA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTGCTGCCTACAGTTGCTaGGCAAAGTCCCAAGAATGC +
Preference number: 3 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPAAYSC*AKSQEC
Trigger: GCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGC...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR GCA 72 bp CAACGGGTTTCCTGGAAACCCATTCTCAACATGAGCTaGCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCA +
Preference number: 3 (lower is better)
Translates to: QRVSWKPILNMS*LQLLGKVPRMP
Trigger: TGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGAATGGGTTTCCAGGAAACCCGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR-3UTR CAA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAATGAGCTGCCTACAGTaGCTTGGCAAAGTCCCAAGA +
Preference number: 3 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGMSCLQ*LGKVPR
Trigger: TCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR-3UTR CAA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTATGAGCTGCCTACAGTaGCTTGGCAAAGTCCCAAGA +
Preference number: 3 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPMSCLQ*LGKVPR
Trigger: TCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR TCA 72 bp CAAGACAACGGGTTTCCTGGAAACCCATTCTCAACATaGGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAA +
Preference number: 3 (lower is better)
Translates to: QDNGFPGNPFST*AAYSCLAKSQE
Trigger: TTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGAATGGGTTTCCAGGAAACCCGTTGTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR CCA 72 bp GAAACCCATTCTCAACATGAGCTGCCTACAGTTGCTTaGCAAAGTCCCAAGAATGCCAGCGTCACACAATAC +
Preference number: 3 (lower is better)
Translates to: ETHSQHELPTVA*QSPKNASVTQY
Trigger: GTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGAATGGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR-3UTR CAA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACGGAAGGTTTTCGACCTaGGGTTATATGGACCTTGGG +
Preference number: 3 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHGRFST*GYMDLG
Trigger: CCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCC...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR-3UTR CAA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTaGGGTGTTGGAAGTCTAGAT +
Preference number: 3 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPWVIWT*GVGSLD
Trigger: ATCTAGACTTCCAACACCCAAGGTCCATATAACCCA...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR CCA 72 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATaGACCTTGGGTGTTGGAAGTCTAGATATGGAGACC +
Preference number: 3 (lower is better)
Translates to: PMMQEGFRPWVI*TLGVGSLDMET
Trigger: GGTCTCCATATCTAGACTTCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR CCA 72 bp GCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTTaGGTTATATGGACCTTGGGTGTTGGAAGTCTAGAT +
Preference number: 3 (lower is better)
Translates to: AKHPMMQEGFRP*VIWTLGVGSLD
Trigger: ATCTAGACTTCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCTGGTTCTTCAAGCCCTaGGCGCCCGGCGGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVWFFKP*APGGRA
Trigger: GGCGCGGCCGCCGGGCGCTCAGGGCTTGAAGAACCA...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285199.12
CDS-3UTR GCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGGCCCAGGTCCATGGCTaGCGCCGGCGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWAQVHG*RRRSSR
Trigger: CCTGGAGCTGCGCCGGCGGCAGCCATGGACCTGGGC...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285199.12
CDS-3UTR GCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATCTGGCCCTCACGGGCTaGCAGGCGTGGGGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNLALTG*QAWGGR
Trigger: TCGGCCTCCCCACGCCTGGCAGCCCGTGAGGGCCAG...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACGGGCTGCCAGGCGTaGGGAGGCCGACAGACCCAG +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVTGCQA*GGRQTQ
Trigger: CTGGGTCTGTCGGCCTCCCCACGCCTGGCAGCCCGT...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCGAGCCTGCCCGTCCATaGCAGGGCTCAGCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVEPARP*QGSARH
Trigger: GTGGCGGGCTGAGCCCTGCCATGGACGGGCAGGCTC...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGTTCCCGGCCGGGGCATaGACCCCCAGGGCGGGACCT +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWFPAGA*TPRAGP
Trigger: AGGTCCCGCCCTGGGGGTCCATGCCCCGGCCGGGAA...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573955.1
CDS-3UTR TCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGGGGCTGCCACTGTGCTaGGGATCGGCACGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWGLPLC*GSARPG
Trigger: GCCTGGCCGTGCCGATCCTCAGCACAGTGGCAGCCC...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCAAACCACCCGGACTGTaGGGCCCCCGCAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSKPPGL*GPRSTW
Trigger: CCACGTGCTGCGGGGGCCTCACAGTCCGGGTGGTTT...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573955.1
CDS-3UTR GCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGACTGGCCCTCACGGGCTaGCAGGCGTGGGGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGLALTG*QAWGGR
Trigger: TCGGCCTCCCCACGCCTGGCAGCCCGTGAGGGCCAG...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR GCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCGGCAGGCAGTCCGGCTaGTTCCAGGAAGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVGRQSG*FQEGQG
Trigger: CCCCTGGCCTTCCTGGAAGCAGCCGGACTGCCTGCC...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAGGCTTCCCCTTGTGCTaGCAGCGTGGCTCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASGFPLC*QRGSRA
Trigger: GGCTCGGGAGCCACGCTGGCAGCACAAGGGGAAGCC...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAGGTGAGCCTGGAGCCTaGCCGTCCATGGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASGEPGA*PSMAGL
Trigger: GAGCCCTGCCATGGACGGGCAGGCTCCAGGCTCACC...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGTCACAGTGTCCCGGCTaGGGCCGGGGCGGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWSQCPG*GRGGES
Trigger: GGACTCACCGCCCCGGCCCCAGCCGGGACACTGTGA...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285199.12
CDS-3UTR CCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGACGGGCTGCCAGGCGTaGGGAGGCCGACAGACCCAG +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWTGCQA*GGRQTQ
Trigger: CTGGGTCTGTCGGCCTCCCCACGCCTGGCAGCCCGT...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCACCGGCCCTCGGGATaGACCCTCCAGGTCCTCATG +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVHRPSG*TLQVLM
Trigger: CATGAGGACCTGGAGGGTTCATCCCGAGGGCCGGTG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAGGGCTGCCACTGTGCTaGGGATCGGCACGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGGLPLC*GSARPG
Trigger: GCCTGGCCGTGCCGATCCTCAGCACAGTGGCAGCCC...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR GCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACACCAGCGCCGCCAGCTaGTCGGTGACCTCGGCGCGG +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHTSAAS*SVTSAR
Trigger: CCGCGCCGAGGTCACCGAGCAGCTGGCGGCGCTGGT...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285199.12
CDS-3UTR GCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATGGCTTCCCCTTGTGCTaGCAGCGTGGCTCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNGFPLC*QRGSRA
Trigger: GGCTCGGGAGCCACGCTGGCAGCACAAGGGGAAGCC...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGGGCTTCCCCTTGTGCTaGCAGCGTGGCTCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWGFPLC*QRGSRA
Trigger: GGCTCGGGAGCCACGCTGGCAGCACAAGGGGAAGCC...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCGCAGGCTTCCCCTTGTaGTGCCAGCGTGGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSAGFPL*CQRGSR
Trigger: TCGGGAGCCACGCTGGCAGCACAAGGGGAAGCCTGC...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATGGTGAGCCTGGAGCCTaGCCGTCCATGGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNGEPGA*PSMAGL
Trigger: GAGCCCTGCCATGGACGGGCAGGCTCCAGGCTCACC...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCATGCCTCTCGGGGCCCTaGTGGCTTTACGAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASCLSGP*WLYEGG
Trigger: GCCTCCCTCGTAAAGCCAGCAGGGCCCCGAGAGGCA...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAACATGCCCAGTGCACTaGCTCTCGGGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASTCPVH*LSGPCW
Trigger: CCAGCAGGGCCCCGAGAGGCAGTGCACTGGGCATGT...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATTGCGCTCGCTCCTCCTaGAGGCTCCCGAACAGGCGC +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNCARSS*RLPNRR
Trigger: GCGCCTGTTCGGGAGCCTCCAGGAGGAGCGAGCGCA...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAGAGCCTGCCCGTCCATaGCAGGGCTCAGCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGEPARP*QGSARH
Trigger: GTGGCGGGCTGAGCCCTGCCATGGACGGGCAGGCTC...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCGGAGGCGGAGAGAGCTaGGGGCTGACCAGACATCCC +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVGGGES*GLTRHP
Trigger: GGGATGTCTGGTCAGCCCCCAGCTCTCTCCGCCTCC...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCTCTCGGGGCCCTGCTaGCTTTACGAGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVLSGPC*LYEGGG
Trigger: TCCGCCTCCCTCGTAAAGCCAGCAGGGCCCCGAGAG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCCAGCAGGAAGCGGCTaGACAGGCGGCGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHPAGSG*TGGAGS
Trigger: GCTCCCTGCGCCGCCTGTTCAGCCGCTTCCTGCTGG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285199.12
CDS-3UTR TCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAGTACAGCTGTGCTGCTaGTGCGCCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASVQLCC*CACCCC
Trigger: GCAGCAGCAGCAGGCGCATCAGCAGCACAGCTGTAC...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAGACAGTGGTTGGGTTaGGCCGAGGGACAGGGCACC +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVRQWLG*AEGQGT
Trigger: GGTGCCCTGTCCCTCGGCTCAACCCAACCACTGTCT...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCGAGAGAGCTGGGGGCTaGCCAGACATCCCTCTCGAG +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSERAGG*PDIPLE
Trigger: CTCGAGAGGGATGTCTGGTCAGCCCCCAGCTCTCTC...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCACACTGTCGGCATCCTaGGCTCGCTCCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSTLSAS*ARSSWR
Trigger: CCTCCAGGAGGAGCGAGCGCAGGATGCCGACAGTGT...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTGGCAGGCAGTCCGGCTaGTTCCAGGAAGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPGRQSG*FQEGQG
Trigger: CCCCTGGCCTTCCTGGAAGCAGCCGGACTGCCTGCC...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGGCAGGCAGTCCGGCTaGTTCCAGGAAGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGGRQSG*FQEGQG
Trigger: CCCCTGGCCTTCCTGGAAGCAGCCGGACTGCCTGCC...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGGCAGGCTTCCCCTTGTaGTGCCAGCGTGGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWAGFPL*CQRGSR
Trigger: TCGGGAGCCACGCTGGCAGCACAAGGGGAAGCCTGC...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGTGCCTCTCGGGGCCCTaGTGGCTTTACGAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWCLSGP*WLYEGG
Trigger: GCCTCCCTCGTAAAGCCAGCAGGGCCCCGAGAGGCA...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTTGCGCTCGCTCCTCCTaGAGGCTCCCGAACAGGCGC +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGCARSS*RLPNRR
Trigger: GCGCCTGTTCGGGAGCCTCCAGGAGGAGCGAGCGCA...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCGGGCTGGTGCTTCTCTaGGCCACATGGGGAGCCATG +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVGLVLL*ATWGAM
Trigger: CATGGCTCCCCATGTGGCCCAGAGAAGCACCAGCCC...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAAGTCCAGCGGGTAACTaGTGGGCAGGCAGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASSPAGN*WAGSPA
Trigger: AGCCGGACTGCCTGCCCACCAGTTACCCGCTGGACT...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCAGTCCAGCGGGTAACTaGTGGGCAGGCAGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSSPAGN*WAGSPA
Trigger: AGCCGGACTGCCTGCCCACCAGTTACCCGCTGGACT...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCGGGCCAGACAGTGGTTaGGTTGAGCCGAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVGPDSG*VEPRDR
Trigger: CCTGTCCCTCGGCTCAACCCAACCACTGTCTGGCCC...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAGGCCCCCGCAGCACGTaGCCAACCCACCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGGPRST*PTHQRQ
Trigger: CTGCCTTTGGTGGGTTGGCCACGTGCTGCGGGGGCC...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573955.1
CDS-3UTR TCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCAGTCCCCTGGCTGGGTaGGGGAGGAACTTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSSPLAG*GRNLKG
Trigger: GCCTTTCAAGTTCCTCCCTCACCCAGCCAGGGGACT...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAGACAGTGGTTGGGTTaGGCCGAGGGACAGGGCACC +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWRQWLG*AEGQGT
Trigger: GGTGCCCTGTCCCTCGGCTCAACCCAACCACTGTCT...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATGAGAGAGCTGGGGGCTaGCCAGACATCCCTCTCGAG +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNERAGG*PDIPLE
Trigger: CTCGAGAGGGATGTCTGGTCAGCCCCCAGCTCTCTC...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGGAGAGAGCTGGGGGCTaGCCAGACATCCCTCTCGAG +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWERAGG*PDIPLE
Trigger: CTCGAGAGGGATGTCTGGTCAGCCCCCAGCTCTCTC...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTGCAGGCTTCCCCTTGTaGTGCCAGCGTGGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPAGFPL*CQRGSR
Trigger: TCGGGAGCCACGCTGGCAGCACAAGGGGAAGCCTGC...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACGGTGAGCCTGGAGCCTaGCCGTCCATGGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHGEPGA*PSMAGL
Trigger: GAGCCCTGCCATGGACGGGCAGGCTCCAGGCTCACC...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGATGCCTCTCGGGGCCCTaGTGGCTTTACGAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGCLSGP*WLYEGG
Trigger: GCCTCCCTCGTAAAGCCAGCAGGGCCCCGAGAGGCA...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAACATGCCCAGTGCACTaGCTCTCGGGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGTCPVH*LSGPCW
Trigger: CCAGCAGGGCCCCGAGAGGCAGTGCACTGGGCATGT...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTACATGCCCAGTGCACTaGCTCTCGGGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGTCPVH*LSGPCW
Trigger: CCAGCAGGGCCCCGAGAGGCAGTGCACTGGGCATGT...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCGCTGAGAGAGTCCCCTaGCTGGGTGAGGGAGGAACT +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVAERVP*LGEGGT
Trigger: AGTTCCTCCCTCACCCAGCCAGGGGACTCTCTCAGC...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTGAGAGGGAGAATCGCTaGCCCTCACGGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPERENR*PSRAAR
Trigger: CCTGGCAGCCCGTGAGGGCCAGCGATTCTCCCTCTC...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATGGGCTGGTGCTTCTCTaGGCCACATGGGGAGCCATG +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNGLVLL*ATWGAM
Trigger: CATGGCTCCCCATGTGGCCCAGAGAAGCACCAGCCC...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCGTCCTGCCTCAGGGCTaGTGCTTCTCTGGGCCACAT +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVVLPQG*CFSGPH
Trigger: ATGTGGCCCAGAGAAGCACCAGCCCTGAGGCAGGAC...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGACCAGCGGGTAACTGGTaGGCAGGCAGTCCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGPAGNW*AGSPAA
Trigger: AGCAGCCGGACTGCCTGCCCACCAGTTACCCGCTGG...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTCCAGCGGGTAACTGGTaGGCAGGCAGTCCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPPAGNW*AGSPAA
Trigger: AGCAGCCGGACTGCCTGCCCACCAGTTACCCGCTGG...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTCCAGCGGGTAACTGGTaGGCAGGCAGTCCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGPAGNW*AGSPAA
Trigger: AGCAGCCGGACTGCCTGCCCACCAGTTACCCGCTGG...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATCTTGTGCTGCCAGCGTaGCTCCCGAGCCGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNLVLPA*LPSRKS
Trigger: GCTCTTACGGCTCGGGAGCCACGCTGGCAGCACAAG...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCAGGAAGGGCGACGTTaGACCTCGGCGATGCTGACT +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVQEGRR*TSAMLT
Trigger: AGTCAGCATCGCCGAGGTCCAACGTCGCCCTTCCTG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGGGGCCAGACAGTGGTTaGGTTGAGCCGAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWGPDSG*VEPRDR
Trigger: CCTGTCCCTCGGCTCAACCCAACCACTGTCTGGCCC...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCCAGTTCATGGCCTTCTaGCCCTCCGGTCGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSQFMAF*PSGRAG
Trigger: ACCAGCTCGACCGGAGGGCCAGAAGGCCATGAACTG...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGGAGGCGGAGAGAGCTaGGGGCTGACCAGACATCCC +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGGGGES*GLTRHP
Trigger: GGGATGTCTGGTCAGCCCCCAGCTCTCTCCGCCTCC...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTCTCTCGGGGCCCTGCTaGCTTTACGAGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGLSGPC*LYEGGG
Trigger: TCCGCCTCCCTCGTAAAGCCAGCAGGGCCCCGAGAG...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGATGCGCTCGCTCCTCCTaGAGGCTCCCGAACAGGCTG +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGCARSS*RLPNRL
Trigger: CAGCCTGTTCGGGAGCCTCCAGGAGGAGCGAGCGCA...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573955.1
CDS-3UTR TCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCGCACCACCGCGTTCATaGAACAGGTGTTGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSAPPRS*NRCCRG
Trigger: ACCACGGCAACACCTGTTTCATGAACGCGGTGGTGC...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285199.12
CDS-3UTR TCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAGCAGGTCGGTGTTGCTaGGACACTGCACCACCGCGT +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGAGRCC*DTAPPR
Trigger: ACGCGGTGGTGCAGTGTCTCAGCAACACCGACCTGC...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285199.12
CDS-3UTR TCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATAGTCCCCTGGCTGGGTaGGGGAGGAACTTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNSPLAG*GRNLKG
Trigger: GCCTTTCAAGTTCCTCCCTCACCCAGCCAGGGGACT...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTACCCAGTGGATGAGCTaGGAGAGTCCCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGTQWMS*ESPLAG
Trigger: CCCAGCCAGGGGACTCTCTCAGCTCATCCACTGGGT...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATGACAGACCCAGTGGATaGGCTGAGAGAGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNDRPSG*AERVPW
Trigger: CCAGGGGACTCTCTCAGCTCATCCACTGGGTCTGTC...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTCTGTCAACTGCCCAGTaGCAGAGGGGCCGACTGTCC +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGLSTAQ*QRGRLS
Trigger: GGACAGTCGGCCCCTCTGTCACTGGGCAGTTGACAG...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCGGCCTCCTGGCCTCCTaGGATGCAAAACCCTGTCAA +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVGLLAS*DAKPCQ
Trigger: TTGACAGGGTTTTGCATCTCAGGAGGCCAGGAGGCC...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTACTCCACCGCCAGCTTaGCATGTGGAGGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGTPPPA*HVEGLL
Trigger: CAGGAGGCCCTCCACATGTCAAGCTGGCGGTGGAGT...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCCGAACAGGCGCTCCTTaGCAGAGCTATCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSRTGAP*QSYPTP
Trigger: TGGAGTGGGATAGCTCTGTCAAGGAGCGCCTGTTCG...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTACAGCTGTGCTGCTaGTGCGCCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGVQLCC*CACCCC
Trigger: GCAGCAGCAGCAGGCGCATCAGCAGCACAGCTGTAC...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCTGCAGGACTTGGCAGTaGGGACACTTCCAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVCRTWQ*GHFQAS
Trigger: TGACGCCTGGAAGTGTCCTCACTGCCAAGTCCTGCA...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCAGCCGTAAGAGCCAGTaGTCAGACAGGGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSSRKSQ*SDREEL
Trigger: CAGCTCCTCCCTGTCTGATCACTGGCTCTTACGGCT...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAGCAGAGGCATGGTCTTaGATGGTCCCTGCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASAEAWS*MVPAWL
Trigger: GAGCCAAGCAGGGACCATTCAAGACCATGCCTCTGC...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTGGACCTCGGCGATGCTaGCTTCTCATCCTCACCCGC +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPGPRRC*LLILTR
Trigger: GCGGGTGAGGATGAGAAGTCAGCATCGCCGAGGTCC...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAGGACCTCGGCGATGCTaGCTTCTCATCCTCACCCGC +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGGPRRC*LLILTR
Trigger: GCGGGTGAGGATGAGAAGTCAGCATCGCCGAGGTCC...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTAGACAGTGGTTGGGTTaGGCCGAGGGACAGGGCACC +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGRQWLG*AEGQGT
Trigger: GGTGCCCTGTCCCTCGGCTCAACCCAACCACTGTCT...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAGACGCCTCCTTCCTCTaGAACCATCTTCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASDASFL*NHLPQG
Trigger: GCCCTGAGGAAGATGGTTGCAGAGGAAGGAGGCGTC...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR GCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCAAAACCCTGTCAACTaGCCAGTGACAGAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVQNPVN*PVTEGP
Trigger: CGGCCCCTCTGTCACTGGGCAGTTGACAGGGTTTTG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR GCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAACACTGTCGGCATCCTaGGCTCGCTCCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGTLSAS*ARSSWR
Trigger: CCTCCAGGAGGAGCGAGCGCAGGATGCCGACAGTGT...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATGCCCACCTTGCAGGTTaGCATGGTGGTTGCAGACGG +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNAHLAG*HGGCRR
Trigger: CCGTCTGCAACCACCATGGCAACCTGCAAGGTGGGC...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCCATCCTCACCCGCAGTaGCCGTCAACAGCGACACAA +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSHPHPQ*PSTATQ
Trigger: TTGTGTCGCTGTTGACGGGCACTGCGGGTGAGGATG...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAAGGGTGAGTGTCCCCTaGAGGGGTCTGTCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASRVSVP*RGLSSS
Trigger: TGAGCTAGACAGACCCCTGCAGGGGACACTCACCCT...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGACCCGCAGGAACCGCTaGCTCTTAGAGGGGAAGACC +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWTRRNR*LLEGKT
Trigger: GGTCTTCCCCTCTAAGAGCCAGCGGTTCCTGCGGGT...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACGAGAGGGAGAATCGCTaGCCCTCACGGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHERENR*PSRAAR
Trigger: CCTGGCAGCCCGTGAGGGCCAGCGATTCTCCCTCTC...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTCGCCAGCTTGACATGTaGAGGGCCTCCTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGRQLDM*RASWPP
Trigger: AGGAGGCCAGGAGGCCCTCCACATGTCAAGCTGGCG...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGGTCCTGCCTCAGGGCTaGTGCTTCTCTGGGCCACAT +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWVLPQG*CFSGPH
Trigger: ATGTGGCCCAGAGAAGCACCAGCCCTGAGGCAGGAC...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTAGTCCAGCGGGTAACTaGTGGGCAGGCAGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGSPAGN*WAGSPA
Trigger: AGCCGGACTGCCTGCCCACCAGTTACCCGCTGGACT...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGACTTGTGCTGCCAGCGTaGCTCCCGAGCCGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGLVLPA*LPSRKS
Trigger: GCTCTTACGGCTCGGGAGCCACGCTGGCAGCACAAG...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCCCGTACCAAACGCCTaGGCTCCAACCCTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVPVPNA*APTLPF
Trigger: AAAAGGGAGGGTTGGAGCCCAGGCGTTTGGTACGGG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCCCCGTACCAAACGCCTaGGCTCCAACCCTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSPVPNA*APTLPF
Trigger: AAAAGGGAGGGTTGGAGCCCAGGCGTTTGGTACGGG...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACCCGTACCAAACGCCTaGGCTCCAACCCTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASPVPNA*APTLPF
Trigger: AAAAGGGAGGGTTGGAGCCCAGGCGTTTGGTACGGG...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCTCGACGGAGGCACCTaGTGGTTTCTCCTTGGATCC +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVLDGGT*WFLLGS
Trigger: GGATCCAAGGAGAAACCACCAGGTGCCTCCGTCGAG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCCAATGGACTGGCTCGTaGACCGAGGTCTTCGTCTGG +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSQWTGS*TEVFVW
Trigger: CCAGACGAAGACCTCGGTCCACGAGCCAGTCCATTG...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCAATGGACTGGCTCGTaGACCGAGGTCTTCGTCTGG +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVQWTGS*TEVFVW
Trigger: CCAGACGAAGACCTCGGTCCACGAGCCAGTCCATTG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGCAGGAAGGGCGACGTTaGACCTCGGCGATGCTGACT +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWQEGRR*TSAMLT
Trigger: AGTCAGCATCGCCGAGGTCCAACGTCGCCCTTCCTG...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACTGGACCTCTTTCAATaGCCCGCCCACCATCTTCGC +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASLDLFQ*PAHHLR
Trigger: GCGAAGATGGTGGGCGGGCCATTGAAAGAGGTCCAG...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTACAGGGCACCCCGGCTaGACCTCTTTCAATGGCCCG +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGTGHPG*TSFNGP
Trigger: CGGGCCATTGAAAGAGGTCCAGCCGGGGTGCCCTGT...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAACAGGGCACCCCGGCTaGACCTCTTTCAATGGCCCG +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGTGHPG*TSFNGP
Trigger: CGGGCCATTGAAAGAGGTCCAGCCGGGGTGCCCTGT...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTACAGGGCACCCCGGCTaGACCTCTTTCAATGGCCCG +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPTGHPG*TSFNGP
Trigger: CGGGCCATTGAAAGAGGTCCAGCCGGGGTGCCCTGT...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAGGGCCAGACAGTGGTTaGGTTGAGCCGAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGGPDSG*VEPRDR
Trigger: CCTGTCCCTCGGCTCAACCCAACCACTGTCTGGCCC...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACGGAGGCGGAGAGAGCTaGGGGCTGACCAGACATCCC +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHGGGES*GLTRHP
Trigger: GGGATGTCTGGTCAGCCCCCAGCTCTCTCCGCCTCC...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCATCATCCTGGGCCAGCTaGAAAGCAAACCACCCGGAC +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASSSWAS*KANHPD
Trigger: GTCCGGGTGGTTTGCTTTCCAGCTGGCCCAGGATGA...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573955.1
CDS-3UTR TCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAGACAGACCCAGTGGATaGGCTGAGAGAGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGDRPSG*AERVPW
Trigger: CCAGGGGACTCTCTCAGCTCATCCACTGGGTCTGTC...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCTGTCAACTGCCCAGTaGCAGAGGGGCCGACTGTCC +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHLSTAQ*QRGRLS
Trigger: GGACAGTCGGCCCCTCTGTCACTGGGCAGTTGACAG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACACTCCACCGCCAGCTTaGCATGTGGAGGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHTPPPA*HVEGLL
Trigger: CAGGAGGCCCTCCACATGTCAAGCTGGCGGTGGAGT...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATCGAACAGGCGCTCCTTaGCAGAGCTATCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNRTGAP*QSYPTP
Trigger: TGGAGTGGGATAGCTCTGTCAAGGAGCGCCTGTTCG...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACGTACAGCTGTGCTGCTaGTGCGCCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHVQLCC*CACCCC
Trigger: GCAGCAGCAGCAGGCGCATCAGCAGCACAGCTGTAC...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCATGGGGAGCCATGTTaGGTCCAGAGAGCGGAAACT +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVHGEPC*VQRAET
Trigger: AGTTTCCGCTCTCTGGACTCAACATGGCTCCCCATG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGGCAGAGGCATGGTCTTaGATGGTCCCTGCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWAEAWS*MVPAWL
Trigger: GAGCCAAGCAGGGACCATTCAAGACCATGCCTCTGC...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACGGACCTCGGCGATGCTaGCTTCTCATCCTCACCCGC +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHGPRRC*LLILTR
Trigger: GCGGGTGAGGATGAGAAGTCAGCATCGCCGAGGTCC...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGGACGCCTCCTTCCTCTaGAACCATCTTCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWDASFL*NHLPQG
Trigger: GCCCTGAGGAAGATGGTTGCAGAGGAAGGAGGCGTC...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR GCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAAACCTGCTAGCCTGCTaGCCTGACCCCACCAAGTTA +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASNLLAC*PDPTKL
Trigger: TAACTTGGTGGGGTCAGGGCAGCAGGCTAGCAGGTT...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR GCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCTTGCTGAGGATAGACTaGTGGAGCTGGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVLLRID*WSWAQE
Trigger: TTCCTGGGCCCAGCTCCAGCAGTCTATCCTCAGCAA...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR GCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCCTGGCCTCCTGAGATaGAAAACCCTGTCAACTGCC +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVPGLLR*KTLSTA
Trigger: GGCAGTTGACAGGGTTTTGCATCTCAGGAGGCCAGG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR GCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCGGTTGCCATGGTGGTTaGAGACGGCATACAGGTCGT +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVGCHGG*RRHTGR
Trigger: ACGACCTGTATGCCGTCTGCAACCACCATGGCAACC...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCGGTTGCCATGGTGGTTaGAGACGGCATACAGGTCGT +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSGCHGG*RRHTGR
Trigger: ACGACCTGTATGCCGTCTGCAACCACCATGGCAACC...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTGCCCACCTTGCAGGTTaGCATGGTGGTTGCAGACGG +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPAHLAG*HGGCRR
Trigger: CCGTCTGCAACCACCATGGCAACCTGCAAGGTGGGC...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAGTCTTGAATGGTCCCTaGTTGGCTCGGGAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASVLNGP*LAREVV
Trigger: CACCACTTCCCGAGCCAAGCAGGGACCATTCAAGAC...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCAGTCCTTTGTGACATaGCCAGTGCACTGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVQSFVT*PVHCLS
Trigger: CGAGAGGCAGTGCACTGGGCATGTCACAAAGGACTG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCTCAAGAACCTCGTCTaGCGCAAGGGGATAGGTAGG +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVLKNLV*RKGIGR
Trigger: CCTACCTATCCCCTTGCGCCAGACGAGGTTCTTGAG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAGCTGAGAGAGTCCCCTaGCTGGGTGAGGGAGGAACT +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGAERVP*LGEGGT
Trigger: AGTTCCTCCCTCACCCAGCCAGGGGACTCTCTCAGC...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACCTTATCAGGAAGGGTaGCCCAAACCTGCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASPYQEG*PKPASL
Trigger: CAGGCTAGCAGGTTTGGGCCACCCTTCCTGATAAGG...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCGTCCCACAACACGGATaGAGAACAGAGACCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVVPQHG*RTETPG
Trigger: ACCTGGGGTCTCTGTTCTCCATCCGTGTTGTGGGAC...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCGCCAGCTTGACATGTaGAGGGCCTCCTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHRQLDM*RASWPP
Trigger: AGGAGGCCAGGAGGCCCTCCACATGTCAAGCTGGCG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCCTTCTCTCGCCCACCTaGCAGAACCTTTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSLLSPT*QNLLRW
Trigger: CCACCTCAAAAGGTTCTGCCAGGTGGGCGAGAGAAG...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCCTTGCAGGTTGCCATaGTGGTTGCAGACGGCATAC +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVPCRLP*WLQTAY
Trigger: GTATGCCGTCTGCAACCACCATGGCAACCTGCAAGG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCTTGTGCTGCCAGCGTaGCTCCCGAGCCGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHLVLPA*LPSRKS
Trigger: GCTCTTACGGCTCGGGAGCCACGCTGGCAGCACAAG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAAGGCATGGTCTTGAATaGTCCCTGCTTGGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASRHGLE*SLLGSG
Trigger: TCCCGAGCCAAGCAGGGACCATTCAAGACCATGCCT...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGCTCGACGGAGGCACCTaGTGGTTTCTCCTTGGATCC +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWLDGGT*WFLLGS
Trigger: GGATCCAAGGAGAAACCACCAGGTGCCTCCGTCGAG...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAAGCGACACAATGGACTaGCTCGTGGACCGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASSDTMD*LVDRGL
Trigger: AAGACCTCGGTCCACGAGCCAGTCCATTGTGTCGCT...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCATCAACAGCGACACAATaGACTGGCTCGTGGACCGAG +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASSTATQ*TGSWTE
Trigger: CTCGGTCCACGAGCCAGTCCATTGTGTCGCTGTTGA...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTCAGTTCATGGCCTTCTaGCCCTCCGGTCGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPQFMAF*PSGRAG
Trigger: ACCAGCTCGACCGGAGGGCCAGAAGGCCATGAACTG...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATTCTCCTTCCAGTTCATaGCCTTCTGGCCCTCCGGTC +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNSPSSS*PSGPPV
Trigger: GACCGGAGGGCCAGAAGGCCATGAACTGGAAGGAGA...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGCTAGCCTGCTGCCCTaGCCCCACCAAGTTACAGAA +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGASLLP*PHQVTE
Trigger: TTCTGTAACTTGGTGGGGTCAGGGCAGCAGGCTAGC...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTGGCCTCCTGGCCTCCTaGGATGCAAAACCCTGTCAA +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPGLLAS*DAKPCQ
Trigger: TTGACAGGGTTTTGCATCTCAGGAGGCCAGGAGGCC...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGATGCAGGACTTGGCAGTaGGGACACTTCCAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGCRTWQ*GHFQAS
Trigger: TGACGCCTGGAAGTGTCCTCACTGCCAAGTCCTGCA...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTTGCAGGACTTGGCAGTaGGGACACTTCCAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGCRTWQ*GHFQAS
Trigger: TGACGCCTGGAAGTGTCCTCACTGCCAAGTCCTGCA...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTAGCCGTAAGAGCCAGTaGTCAGACAGGGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGSRKSQ*SDREEL
Trigger: CAGCTCCTCCCTGTCTGATCACTGGCTCTTACGGCT...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCTGCAGAGGCTGTTGGTaGAGATGGGAGAGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVCRGCW*RWESQE
Trigger: TTCCTGACTCTCCCATCTTCACCAACAGCCTCTGCA...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCATGTGTTTGGACCATCTaGGTTTCCAGGGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASCVWTI*VSRGQT
Trigger: TGTCTGGCCCCTGGAAACTCAGATGGTCCAAACACA...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATTGGAACAGTCCTTTGTaGCATGCCCAGTGCACTGCC +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNWNSPL*HAQCTA
Trigger: GGCAGTGCACTGGGCATGTCACAAAGGACTGTTCCA...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTCAAAACCCTGTCAACTaGCCAGTGACAGAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGQNPVN*PVTEGP
Trigger: CGGCCCCTCTGTCACTGGGCAGTTGACAGGGTTTTG...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR GCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATCCTGGCCTCCTGAGATaGAAAACCCTGTCAACTGCC +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNPGLLR*KTLSTA
Trigger: GGCAGTTGACAGGGTTTTGCATCTCAGGAGGCCAGG...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR GCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACGCCCACCTTGCAGGTTaGCATGGTGGTTGCAGACGG +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHAHLAG*HGGCRR
Trigger: CCGTCTGCAACCACCATGGCAACCTGCAAGGTGGGC...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGGTCTTGAATGGTCCCTaGTTGGCTCGGGAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWVLNGP*LAREVV
Trigger: CACCACTTCCCGAGCCAAGCAGGGACCATTCAAGAC...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTCATCCTCACCCGCAGTaGCCGTCAACAGCGACACAA +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPHPHPQ*PSTATQ
Trigger: TTGTGTCGCTGTTGACGGGCACTGCGGGTGAGGATG...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCAGGGTGGGCTGCTTTTaGTTCCCATCTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSRVGCF*FPSGSS
Trigger: AGAGCTTCCAGATGGGAAGCAAAAGCAGCCCACCCT...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTAGGGTGAGTGTCCCCTaGAGGGGTCTGTCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPRVSVP*RGLSSS
Trigger: TGAGCTAGACAGACCCCTGCAGGGGACACTCACCCT...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGCAGTCCTTTGTGACATaGCCAGTGCACTGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWQSFVT*PVHCLS
Trigger: CGAGAGGCAGTGCACTGGGCATGTCACAAAGGACTG...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACACCCGCAGGAACCGCTaGCTCTTAGAGGGGAAGACC +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHTRRNR*LLEGKT
Trigger: GGTCTTCCCCTCTAAGAGCCAGCGGTTCCTGCGGGT...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATCTTCTCTCGCCCACCTaGCAGAACCTTTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNLLSPT*QNLLRW
Trigger: CCACCTCAAAAGGTTCTGCCAGGTGGGCGAGAGAAG...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATCTTCTCTGGGCCACATaGGGAGCCATGTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNLLWAT*GAMLSP
Trigger: TGGACTCAACATGGCTCCCCATGTGGCCCAGAGAAG...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGCTTCTCTGGGCCACATaGGGAGCCATGTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWLLWAT*GAMLSP
Trigger: TGGACTCAACATGGCTCCCCATGTGGCCCAGAGAAG...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACGTCCTGCCTCAGGGCTaGTGCTTCTCTGGGCCACAT +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHVLPQG*CFSGPH
Trigger: ATGTGGCCCAGAGAAGCACCAGCCCTGAGGCAGGAC...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGTGCAGGTTGCCATGGTaGTTGCAGACGGCATACAGG +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWCRLPW*LQTAYR
Trigger: CCTGTATGCCGTCTGCAACCACCATGGCAACCTGCA...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCTGGTGGTTTCTCCTTaGATCCAAAGGACCACCGCA +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVLVVSP*IQRTTA
Trigger: TGCGGTGGTCCTTTGGATCCAAGGAGAAACCACCAG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAGACGGAGGCACCTGGTaGTTTCTCCTTGGATCCAAA +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASDGGTW*FLLGSK
Trigger: TTTGGATCCAAGGAGAAACCACCAGGTGCCTCCGTC...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAGCGACACAATGGACTaGCTCGTGGACCGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWSDTMD*LVDRGL
Trigger: AAGACCTCGGTCCACGAGCCAGTCCATTGTGTCGCT...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCAGGAAGGGCGACGTTaGACCTCGGCGATGCTGACT +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHQEGRR*TSAMLT
Trigger: AGTCAGCATCGCCGAGGTCCAACGTCGCCCTTCCTG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTCTGGACCTCTTTCAATaGCCCGCCCACCATCTTCGC +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGLDLFQ*PAHHLR
Trigger: GCGAAGATGGTGGGCGGGCCATTGAAAGAGGTCCAG...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCAGTTCATGGCCTTCTaGCCCTCCGGTCGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHQFMAF*PSGRAG
Trigger: ACCAGCTCGACCGGAGGGCCAGAAGGCCATGAACTG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGATCTCCTTCCAGTTCATaGCCTTCTGGCCCTCCGGTC +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGSPSSS*PSGPPV
Trigger: GACCGGAGGGCCAGAAGGCCATGAACTGGAAGGAGA...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCATATAGGGGGAGGGTaGGCTGCTTTTGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVHIGGG*AAFASH
Trigger: ATGGGAAGCAAAAGCAGCCCACCCTCCCCCTATATG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATTTCCAGGCGTCATCCTaGGCCAGCTGGAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNFQASS*ASWKAN
Trigger: GTTTGCTTTCCAGCTGGCCCAGGATGACGCCTGGAA...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573955.1
CDS-3UTR TCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCATGGAAACTGCATTCTTaGACTCCGCGGAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASWKLHS*TPRKVG
Trigger: CCCAACTTTCCGCGGAGTTCAAGAATGCAGTTTCCA...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285199.12
CDS-3UTR TCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATAGGGGAAGACCAAGGTaGCACTCAAGAACCTCGTCT +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNRGRPR*HSRTSS
Trigger: AGACGAGGTTCTTGAGTGTCACCTTGGTCTTCCCCT...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAGGGGAAGACCAAGGTaGCACTCAAGAACCTCGTCT +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWRGRPR*HSRTSS
Trigger: AGACGAGGTTCTTGAGTGTCACCTTGGTCTTCCCCT...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACGCTAGCCTGCTGCCCTaGCCCCACCAAGTTACAGAA +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHASLLP*PHQVTE
Trigger: TTCTGTAACTTGGTGGGGTCAGGGCAGCAGGCTAGC...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGACATGGGGAGCCATGTTaGGTCCAGAGAGCGGAAACT +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGHGEPC*VQRAET
Trigger: AGTTTCCGCTCTCTGGACTCAACATGGCTCCCCATG...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGTGTGTTTGGACCATCTaGGTTTCCAGGGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWCVWTI*VSRGQT
Trigger: TGTCTGGCCCCTGGAAACTCAGATGGTCCAAACACA...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGATGGAACAGTCCTTTGTaGCATGCCCAGTGCACTGCC +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGWNSPL*HAQCTA
Trigger: GGCAGTGCACTGGGCATGTCACAAAGGACTGTTCCA...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGACGTCGTGCTGGGAATTaGCTTGGAACTGAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGRRAGN*LGTESR
Trigger: ACGGCTCTCAGTTCCAAGGCAATTCCCAGCACGACG...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285199.12
CDS-3UTR GCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTCAAGATCACCTCATCTaGAGGGACGCCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPQDHLI*RDASFL
Trigger: GAGGAAGGAGGCGTCCCTGCAGATGAGGTGATCTTG...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR GCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAAACCTGCTAGCCTGCTaGCCTGACCCCACCAAGTTA +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGNLLAC*PDPTKL
Trigger: TAACTTGGTGGGGTCAGGGCAGCAGGCTAGCAGGTT...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR GCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTTTGCTGAGGATAGACTaGTGGAGCTGGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPLLRID*WSWAQE
Trigger: TTCCTGGGCCCAGCTCCAGCAGTCTATCCTCAGCAA...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR GCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATTCGGAGACAAATAGCTaGAGGCCACAGAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNSETNS*RPQRVP
Trigger: TGGGACTCTCTGTGGCCTGCAGCTATTTGTCTCCGA...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR GCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTGGTTGCCATGGTGGTTaGAGACGGCATACAGGTCGT +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPGCHGG*RRHTGR
Trigger: ACGACCTGTATGCCGTCTGCAACCACCATGGCAACC...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAGAAGCGGTTCCACCGTaGTGTCATCATAACTGTACC +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASEAVPP*CHHNCT
Trigger: GGTACAGTTATGATGACAGCACGGTGGAACCGCTTC...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTGTCTTGAATGGTCCCTaGTTGGCTCGGGAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPVLNGP*LAREVV
Trigger: CACCACTTCCCGAGCCAAGCAGGGACCATTCAAGAC...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCATCCTCACCCGCAGTaGCCGTCAACAGCGACACAA +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHHPHPQ*PSTATQ
Trigger: TTGTGTCGCTGTTGACGGGCACTGCGGGTGAGGATG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCCGAGCTGGTTTCTCATaGTCCACTGAAGGCATCACA +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSRAGFS*STEGIT
Trigger: TGTGATGCCTTCAGTGGAGCATGAGAAACCAGCTCG...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTAACTCCGCGGAAAGTTaGGGCGTGTATTCGCGAGTC +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPNSAES*GVYSRV
Trigger: GACTCGCGAATACACGCCCCAACTTTCCGCGGAGTT...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285199.12
CDS-3UTR CCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTAGAGAGTCCCCTGGCTaGGTGAGGGAGGAACTTGAA +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGRESPG*VREELE
Trigger: TTCAAGTTCCTCCCTCACCCAGCCAGGGGACTCTCT...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTAGAGAGTCCCCTGGCTaGGTGAGGGAGGAACTTGAA +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPRESPG*VREELE
Trigger: TTCAAGTTCCTCCCTCACCCAGCCAGGGGACTCTCT...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTCCTTATCAGGAAGGGTaGCCCAAACCTGCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPPYQEG*PKPASL
Trigger: CAGGCTAGCAGGTTTGGGCCACCCTTCCTGATAAGG...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAATGTGGAGGGCCTCCTaGCCTCCTGAGATGCAAAAC +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGMWRAS*PPEMQN
Trigger: GTTTTGCATCTCAGGAGGCCAGGAGGCCCTCCACAT...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTCTTCTCTCGCCCACCTaGCAGAACCTTTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPLLSPT*QNLLRW
Trigger: CCACCTCAAAAGGTTCTGCCAGGTGGGCGAGAGAAG...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGATGCAGGTTGCCATGGTaGTTGCAGACGGCATACAGG +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGCRLPW*LQTAYR
Trigger: CCTGTATGCCGTCTGCAACCACCATGGCAACCTGCA...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGCAGGTTGCCATGGTaGTTGCAGACGGCATACAGG +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPCRLPW*LQTAYR
Trigger: CCTGTATGCCGTCTGCAACCACCATGGCAACCTGCA...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATCTGGTGGTTTCTCCTTaGATCCAAAGGACCACCGCA +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNLVVSP*IQRTTA
Trigger: TGCGGTGGTCCTTTGGATCCAAGGAGAAACCACCAG...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGCTGGTGGTTTCTCCTTaGATCCAAAGGACCACCGCA +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWLVVSP*IQRTTA
Trigger: TGCGGTGGTCCTTTGGATCCAAGGAGAAACCACCAG...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATGACGGAGGCACCTGGTaGTTTCTCCTTGGATCCAAA +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNDGGTW*FLLGSK
Trigger: TTTGGATCCAAGGAGAAACCACCAGGTGCCTCCGTC...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCTCGACGGAGGCACCTaGTGGTTTCTCCTTGGATCC +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHLDGGT*WFLLGS
Trigger: GGATCCAAGGAGAAACCACCAGGTGCCTCCGTCGAG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACCGAGGTCTTCGTCTaGATTCCAAGTACTCCACCA +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVTEVFV*IPSTPP
Trigger: TGGTGGAGTACTTGGAATCCAGACGAAGACCTCGGT...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCAATGGACTGGCTCGTaGACCGAGGTCTTCGTCTGG +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHQWTGS*TEVFVW
Trigger: CCAGACGAAGACCTCGGTCCACGAGCCAGTCCATTG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAAGCGACACAATGGACTaGCTCGTGGACCGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGSDTMD*LVDRGL
Trigger: AAGACCTCGGTCCACGAGCCAGTCCATTGTGTCGCT...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTTCAACAGCGACACAATaGACTGGCTCGTGGACCGAG +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGSTATQ*TGSWTE
Trigger: CTCGGTCCACGAGCCAGTCCATTGTGTCGCTGTTGA...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCTGGACCTCTTTCAATaGCCCGCCCACCATCTTCGC +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHLDLFQ*PAHHLR
Trigger: GCGAAGATGGTGGGCGGGCCATTGAAAGAGGTCCAG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
3UTR CAA 72 bp TCCTGGAAACCCATTCTCAACATGAGCTGCCTACAGTaGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACAC +
Preference number: 4 (lower is better)
Translates to: SWKPILNMSCLQ*LGKVPRMPASH
Trigger: GTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGAATGGGTTTCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCATGGGGAGCCATGTTaGGTCCAGAGAGCGGAAACT +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHHGEPC*VQRAET
Trigger: AGTTTCCGCTCTCTGGACTCAACATGGCTCCCCATG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGCAGAGGCTGTTGGTaGAGATGGGAGAGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPCRGCW*RWESQE
Trigger: TTCCTGACTCTCCCATCTTCACCAACAGCCTCTGCA...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACTGGAACAGTCCTTTGTaGCATGCCCAGTGCACTGCC +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHWNSPL*HAQCTA
Trigger: GGCAGTGCACTGGGCATGTCACAAAGGACTGTTCCA...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAACCCATTCTCAACATaGGCTGCCTACAGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVNPFST*AAYSCL
Trigger: CAAGCAACTGTAGGCAGCTCATGTTGAGAATGGGTT...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATGTGTTGCTGAGACACTaGACCACCGCGTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNVLLRH*TTAFMK
Trigger: TTTCATGAACGCGGTGGTGCAGTGTCTCAGCAACAC...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285199.12
CDS-3UTR GCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAAATTCCAGGGCGTCGTaGTGGGAATTGCCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGNSRAS*WELPWN
Trigger: GTTCCAAGGCAATTCCCAGCACGACGCCCTGGAATT...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285199.12
CDS-3UTR GCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCAGAGGATTAGCACCTTaGTCTCACTGTGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSRGLAP*SHCGER
Trigger: TCTCTCTCCACAGTGAGAGCAAGGTGCTAATCCTCT...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR GCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGATCGGAGACAAATAGCTaGAGGCCACAGAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGSETNS*RPQRVP
Trigger: TGGGACTCTCTGTGGCCTGCAGCTATTTGTCTCCGA...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR GCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCGGAAGCTTGATGTCCTaGCCTGCATTTTCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSGSLMS*PAFSLS
Trigger: ACTCAAGGAAAATGCAGGGCAGGACATCAAGCTTCC...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAAGGGTGGGCTGCTTTTaGTTCCCATCTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGRVGCF*FPSGSS
Trigger: AGAGCTTCCAGATGGGAAGCAAAAGCAGCCCACCCT...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGCTCGGCGACTGTCTTTaGTGTTTCCAGAGAATCCCA +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWLGDCL*CFQRIP
Trigger: TGGGATTCTCTGGAAACAGCAAAGACAGTCGCCGAG...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACCGCTGGAATCCACTaGGATACAGTTCAACCAAGA +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVTAGIH*DTVQPR
Trigger: TCTTGGTTGAACTGTATCCCAGTGGATTCCAGCGGT...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACGTCCCACAACACGGATaGAGAACAGAGACCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHVPQHG*RTETPG
Trigger: ACCTGGGGTCTCTGTTCTCCATCCGTGTTGTGGGAC...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACATGTGGAGGGCCTCCTaGCCTCCTGAGATGCAAAAC +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHMWRAS*PPEMQN
Trigger: GTTTTGCATCTCAGGAGGCCAGGAGGCCCTCCACAT...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACAGAACCTTTTGAGGTaGATGATGAGGATGTCAGGC +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASQNLLR*MMRMSG
Trigger: GCCTGACATCCTCATCATCCACCTCAAAAGGTTCTG...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCCTTGCAGGTTGCCATaGTGGTTGCAGACGGCATAC +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHPCRLP*WLQTAY
Trigger: GTATGCCGTCTGCAACCACCATGGCAACCTGCAAGG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACAGGCATGGTCTTGAATaGTCCCTGCTTGGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHRHGLE*SLLGSG
Trigger: TCCCGAGCCAAGCAGGGACCATTCAAGACCATGCCT...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAGACGGAGGCACCTGGTaGTTTCTCCTTGGATCCAAA +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGDGGTW*FLLGSK
Trigger: TTTGGATCCAAGGAGAAACCACCAGGTGCCTCCGTC...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTCATATAGGGGGAGGGTaGGCTGCTTTTGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPHIGGG*AAFASH
Trigger: ATGGGAAGCAAAAGCAGCCCACCCTCCCCCTATATG...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGACATATAGGGGGAGGGTaGGCTGCTTTTGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGHIGGG*AAFASH
Trigger: ATGGGAAGCAAAAGCAGCCCACCCTCCCCCTATATG...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCGCTCCATCAAAAGCTaGACTCCGGTAAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVRSIKS*TPVRFS
Trigger: AGAAAACCTTACCGGAGTCCAGCTTTTGATGGAGCG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCGACCTTGGGTTATATaGACCTTGGGTGTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVRPWVI*TLGVGS
Trigger: ACTTCCAACACCCAAGGTCCATATAACCCAAGGTCG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAGGTGAGGGAGGAACTTaGAAGGCATACACATTATCT +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASGEGGT*KAYTLS
Trigger: AGATAATGTGTATGCCTTTCAAGTTCCTCCCTCACC...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR TCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACTGCAGAGGCTGTTGGTaGAGATGGGAGAGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHCRGCW*RWESQE
Trigger: TTCCTGACTCTCCCATCTTCACCAACAGCCTCTGCA...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGACTGAAGGCATCACAGTaGGAGGCAGGTCAAACTTTC +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGLKASQ*EAGQTF
Trigger: GAAAGTTTGACCTGCCTCTCACTGTGATGCCTTCAG...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTCTGAAGGCATCACAGTaGGAGGCAGGTCAAACTTTC +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGLKASQ*EAGQTF
Trigger: GAAAGTTTGACCTGCCTCTCACTGTGATGCCTTCAG...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAACCCATTCTCAACATaGGCTGCCTACAGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWNPFST*AAYSCL
Trigger: CAAGCAACTGTAGGCAGCTCATGTTGAGAATGGGTT...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAGAAGCGGTTCCACCGTaGTGTCATCATAACTGTACC +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGEAVPP*CHHNCT
Trigger: GGTACAGTTATGATGACAGCACGGTGGAACCGCTTC...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGATCGGGAAGTGGTGGGTaGCTTCATGCTAATGCTTCT +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGSGSGG*LHANAS
Trigger: AGAAGCATTAGCATGAAGGCACCCACCACTTCCCGA...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTCGAGCTGGTTTCTCATaGTCCACTGAAGGCATCACA +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPRAGFS*STEGIT
Trigger: TGTGATGCCTTCAGTGGAGCATGAGAAACCAGCTCG...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGACTCGGCGACTGTCTTTaGTGTTTCCAGAGAATCCCA +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGLGDCL*CFQRIP
Trigger: TGGGATTCTCTGGAAACAGCAAAGACAGTCGCCGAG...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTCTCGGCGACTGTCTTTaGTGTTTCCAGAGAATCCCA +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPLGDCL*CFQRIP
Trigger: TGGGATTCTCTGGAAACAGCAAAGACAGTCGCCGAG...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGGCAAAGTCCCAAGAATaGCAGCGTCACACAATACTG +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWAKSQE*QRHTIL
Trigger: CAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGC...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGCTCTGTTTCAGGCAGTaGGGACAAGTCAAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWLCFRQ*GQVKED
Trigger: ATCTTCCTTGACTTGTCCCCACTGCCTGAAACAGAG...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCTCAAAGAAAGACCGCTaGAATCCACTGGGATACAGT +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVSKKDR*NPLGYS
Trigger: ACTGTATCCCAGTGGATTCCAGCGGTCTTTCTTTGA...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCATATCTCCCTCTGCGATaGTATTCAGGTCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASYLPLR*YSGPLH
Trigger: ATGAAGAGGACCTGAATACCATCGCAGAGGGAGATA...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCCAGCTGCTCCTCCTTaGTGTAGAACTGAAAACATT +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVPAAPP*CRTENI
Trigger: AATGTTTTCAGTTCTACACCAAGGAGGAGCAGCTGG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCCCAGCTGCTCCTCCTTaGTGTAGAACTGAAAACATT +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSPAAPP*CRTENI
Trigger: AATGTTTTCAGTTCTACACCAAGGAGGAGCAGCTGG...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATCAGAACCTTTTGAGGTaGATGATGAGGATGTCAGGC +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNQNLLR*MMRMSG
Trigger: GCCTGACATCCTCATCATCCACCTCAAAAGGTTCTG...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTACCGAGGTCTTCGTCTaGATTCCAAGTACTCCACCA +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGTEVFV*IPSTPP
Trigger: TGGTGGAGTACTTGGAATCCAGACGAAGACCTCGGT...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTACCGAGGTCTTCGTCTaGATTCCAAGTACTCCACCA +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPTEVFV*IPSTPP
Trigger: TGGTGGAGTACTTGGAATCCAGACGAAGACCTCGGT...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATCGCTCCATCAAAAGCTaGACTCCGGTAAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNRSIKS*TPVRFS
Trigger: AGAAAACCTTACCGGAGTCCAGCTTTTGATGGAGCG...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTCTGCCTACAGTTGCTTaGCAAAGTCCCAAGAATGCC +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGLPTVA*QSPKNA
Trigger: GGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAG...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAGACAACGGGTTTCCTaGAAACCCATTCTCAACATG +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVRQRVS*KPILNM
Trigger: CATGTTGAGAATGGGTTTCCAGGAAACCCGTTGTCT...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCATGGACCTTGGGTGTTaGAAGTCTAGATATGGAGAC +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSMDLGC*KSRYGD
Trigger: GTCTCCATATCTAGACTTCCAACACCCAAGGTCCAT...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCGAAGGTTTTCGACCTTaGGTTATATGGACCTTGGGT +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVEGFRP*VIWTLG
Trigger: ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTC...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTACTTTCTGGGAAGCTTaGTGTCCTGCCCTGCATTTT +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGTFWEA*CPALHF
Trigger: AAAATGCAGGGCAGGACATCAAGCTTCCCAGAAAGT...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCTGAAGGCATCACAGTaGGAGGCAGGTCAAACTTTC +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHLKASQ*EAGQTF
Trigger: GAAAGTTTGACCTGCCTCTCACTGTGATGCCTTCAG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAAGAGGATTAGCACCTTaGTCTCACTGTGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGRGLAP*SHCGER
Trigger: TCTCTCTCCACAGTGAGAGCAAGGTGCTAATCCTCT...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR GCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACGAAGCGGTTCCACCGTaGTGTCATCATAACTGTACC +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHEAVPP*CHHNCT
Trigger: GGTACAGTTATGATGACAGCACGGTGGAACCGCTTC...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATCTTGATGTCCTGCCCTaGATTTTCCTTGAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNLDVLP*IFLEFP
Trigger: AGGAAACTCAAGGAAAATGCAGGGCAGGACATCAAG...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTGGAAGCTTGATGTCCTaGCCTGCATTTTCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPGSLMS*PAFSLS
Trigger: ACTCAAGGAAAATGCAGGGCAGGACATCAAGCTTCC...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCGAGCTGGTTTCTCATaGTCCACTGAAGGCATCACA +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHRAGFS*STEGIT
Trigger: TGTGATGCCTTCAGTGGAGCATGAGAAACCAGCTCG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGTCACTCTTCATAAGATaGCGGACCTTGCTGAGGATA +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWSLFIR*RTLLRI
Trigger: TATCCTCAGCAAGGTCCGCCATCTTATGAAGAGTGA...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTCGACCTTGGGTTATATaGACCTTGGGTGTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGRPWVI*TLGVGS
Trigger: ACTTCCAACACCCAAGGTCCATATAACCCAAGGTCG...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACGAATTGCCTTGGAACTaGGAGCCGTACTTGGAAACT +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHELPWN*EPYLET
Trigger: AGTTTCCAAGTACGGCTCTCAGTTCCAAGGCAATTC...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285199.12
CDS-3UTR TCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGGTGAGGGAGGAACTTaGAAGGCATACACATTATCT +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGGEGGT*KAYTLS
Trigger: AGATAATGTGTATGCCTTTCAAGTTCCTCCCTCACC...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR GCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGACTTGATGTCCTGCCCTaGATTTTCCTTGAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGLDVLP*IFLEFP
Trigger: AGGAAACTCAAGGAAAATGCAGGGCAGGACATCAAG...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACGGAAGCTTGATGTCCTaGCCTGCATTTTCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHGSLMS*PAFSLS
Trigger: ACTCAAGGAAAATGCAGGGCAGGACATCAAGCTTCC...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACGCAAAGTCCCAAGAATaGCAGCGTCACACAATACTG +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHAKSQE*QRHTIL
Trigger: CAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGC...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGATTCTCAACATGAGCTaGCTACAGTTGCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWILNMS*LQLLGK
Trigger: TTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGAAT...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCTCTGTTTCAGGCAGTaGGGACAAGTCAAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHLCFRQ*GQVKED
Trigger: ATCTTCCTTGACTTGTCCCCACTGCCTGAAACAGAG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTTCACTCTTCATAAGATaGCGGACCTTGCTGAGGATA +
Preference number: 4 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGSLFIR*RTLLRI
Trigger: TATCCTCAGCAAGGTCCGCCATCTTATGAAGAGTGA...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCGCTCCATCAAAAGCTaGACTCCGGTAAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHRSIKS*TPVRFS
Trigger: AGAAAACCTTACCGGAGTCCAGCTTTTGATGGAGCG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAGAAGGTTTTCGACCTTaGGTTATATGGACCTTGGGT +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGEGFRP*VIWTLG
Trigger: ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTC...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTGGACCTGCTCCTCCTTaGTGTAGAACTGAAAACATT +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPGPAPP*CRTENI
Trigger: AATGTTTTCAGTTCTACACCAAGGAGGAGCAGGTCC...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573955.1
3UTR CAA 72 bp AGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTaGGGTTATATGGACCTTGGGTGTTGGAAGTCTAGA +
Preference number: 4 (lower is better)
Translates to: SKAPNDAGRFST*GYMDLGCWKSR
Trigger: TCTAGACTTCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCTTGATGTCCTGCCCTaGATTTTCCTTGAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHLDVLP*IFLEFP
Trigger: AGGAAACTCAAGGAAAATGCAGGGCAGGACATCAAG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAATTCTCAACATGAGCTaGCTACAGTTGCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGILNMS*LQLLGK
Trigger: TTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGAAT...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACTCAAAGAAAGACCGCTaGAATCCACTGGGATACAGT +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHSKKDR*NPLGYS
Trigger: ACTGTATCCCAGTGGATTCCAGCGGTCTTTCTTTGA...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACAGACAACGGGTTTCCTaGAAACCCATTCTCAACATG +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHRQRVS*KPILNM
Trigger: CATGTTGAGAATGGGTTTCCAGGAAACCCGTTGTCT...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACATGGACCTTGGGTGTTaGAAGTCTAGATATGGAGAC +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHMDLGC*KSRYGD
Trigger: GTCTCCATATCTAGACTTCCAACACCCAAGGTCCAT...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTGATCTATATTGTGCTTaGAAGTGGCTTTGCACAAAG +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPDLYCA*KWLCTK
Trigger: CTTTGTGCAAAGCCACTTTCAAGCACAATATAGATC...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285199.12
CDS-3UTR GCA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCGTAAATATCAGTTCTTaGCCTGAAACTGGTAATACT +
Preference number: 4 (lower is better)
Translates to: SCLAKSQECQRHTILTRSVNISS*PETGNT
Trigger: AGTATTACCAGTTTCAGGGCAAGAACTGATATTTAC...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCTCTTTGCTAGAATCTTaGCTTACCATCACTATCATT +
Preference number: 4 (lower is better)
Translates to: SQHELPTVAWQSPKNASVSLLES*LTITII
Trigger: AATGATAGTGATGGTAAGGCAAGATTCTAGCAAAGA...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR TCA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACAAAGAGTGTGATATTTaGCTCTCTGAAAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHKECDI*LSERCH
Trigger: ATGGCACCTTTCAGAGAGTCAAATATCACACTCTTT...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATGTAAATATCAGTTCTTaGCCTGAAACTGGTAATACT +
Preference number: 4 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNVNISS*PETGNT
Trigger: AGTATTACCAGTTTCAGGGCAAGAACTGATATTTAC...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGTCTTTGCTAGAATCTTaGCTTACCATCACTATCATT +
Preference number: 4 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWSLLES*LTITII
Trigger: AATGATAGTGATGGTAAGGCAAGATTCTAGCAAAGA...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTGTAAATATCAGTTCTTaGCCTGAAACTGGTAATACT +
Preference number: 4 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPVNISS*PETGNT
Trigger: AGTATTACCAGTTTCAGGGCAAGAACTGATATTTAC...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR GCA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGATCTTTGCTAGAATCTTaGCTTACCATCACTATCATT +
Preference number: 4 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGSLLES*LTITII
Trigger: AATGATAGTGATGGTAAGGCAAGATTCTAGCAAAGA...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS CCA 90 bp TGCCTCTCGGGGCCCTGCTGGCTTTACGAGGGAGGCGGAGAGAGCTaGGGGCTGACCAGACATCCCTCTCGAGCCGGCTGCCCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: CLSGPCWLYEGGGES*GLTRHPSRAGCPGP
Trigger: GGGGCCTGGGCAGCCGGCTCGAGAGGGATGTCTGGTCAGCCCCCAGCTCTCTCCGCCTCCCTCGTAAAGCCAGCAGGGCCCCGAGAGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 90 bp AGCCTCGGGCGTGGTGAGAGGCGCGCGCTGGGCGCTGTGTGGGGGTaGGGAGCGCTTTTGTGCACCGCTGGTTCCTCCGCAGGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: SLGRGERRALGAVWG*GALLCTAGSSAGSG
Trigger: ACCTGAGCCTGCGGAGGAACCAGCGGTGCACAAAAGCGCTCCCCACCCCCACACAGCGCCCAGCGCGCGCCTCTCACCACGCCCGAGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570827.6
CDS CCA 90 bp GTGTGCGGACAGGTGTCGCCACCTCCTTCCAGACCGTCTGCCCCTTaGGGGGAGGCAGAGTCTGTGCCTGCACCCGCCAACCCGGGACCT +
Preference number: 5 (lower is better)
Translates to: VCGQVSPPPSRPSAP*GEAESVPAPANPGP
Trigger: AGGTCCCGGGTTGGCGGGTGCAGGCACAGACTCTGCCTCCCCCCAAGGGGCAGACGGTCTGGAAGGAGGTGGCGACACCTGTCCGCACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570827.6
CDS TCA 90 bp CCAGGCGTCATCCTGGGCCAGCTGGAAAGCAAACCACCCGGACTGTaGGGCCCCCGCAGCACGTGGCCAACCCACCAAAGGCAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: PGVILGQLESKPPGL*GPRSTWPTHQRQPA
Trigger: GGCTGGCTGCCTTTGGTGGGTTGGCCACGTGCTGCGGGGGCCTCACAGTCCGGGTGGTTTGCTTTCCAGCTGGCCCAGGATGACGCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573955.1
CDS TCA 90 bp CGCCTCCTTCCTCTGCAACCATCTTCCTCAGGGCTGCCACTGTGCTaGGGATCGGCACGGCCAGGCCAACCCGCAGGAACCGCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: RLLPLQPSSSGLPLC*GSARPGQPAGTAGS
Trigger: AGAGCCAGCGGTTCCTGCGGGTTGGCCTGGCCGTGCCGATCCTCAGCACAGTGGCAGCCCTGAGGAAGATGGTTGCAGAGGAAGGAGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
ENST00000575346.1
CDS GCA 90 bp GGAGCGCTTTTGTGCACCGCTGGTTCCTCCGCAGGCTCAGGTGTGTaGGGACAGGTGTCGCCACCTCCTTCCAGACCGTCTGCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: GALLCTAGSSAGSGV*GQVSPPPSRPSAPW
Trigger: CCAAGGGGCAGACGGTCTGGAAGGAGGTGGCGACACCTGTCCGCACACACCTGAGCCTGCGGAGGAACCAGCGGTGCACAAAAGCGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570827.6
CDS CCA 90 bp TGCAGACGGCATACAGGTCGTACAGGAAGTCCAGCGGGTAACTGGTaGGCAGGCAGTCCGGCTGCTTCCAGGAAGGCCAGGGGCCCAGTC +
Preference number: 5 (lower is better)
Translates to: CRRHTGRTGSPAGNW*AGSPAASRKARGPV
Trigger: GACTGGGCCCCTGGCCTTCCTGGAAGCAGCCGGACTGCCTGCCCACCAGTTACCCGCTGGACTTCCTGTACGACCTGTATGCCGTCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS GCA 90 bp GAACAGTCCTTTGTGACATGCCCAGTGCACTGCCTCTCGGGGCCCTaGTGGCTTTACGAGGGAGGCGGAGAGAGCTGGGGGCTGACCAGA +
Preference number: 5 (lower is better)
Translates to: EQSFVTCPVHCLSGP*WLYEGGGESWGLTR
Trigger: TCTGGTCAGCCCCCAGCTCTCTCCGCCTCCCTCGTAAAGCCAGCAGGGCCCCGAGAGGCAGTGCACTGGGCATGTCACAAAGGACTGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 90 bp AGGATTAGCACCTTGCTCTCACTGTGGAGAGAGAGGGAGAATCGCTaGCCCTCACGGGCTGCCAGGCGTGGGGAGGCCGACAGACCCAGT +
Preference number: 5 (lower is better)
Translates to: RISTLLSLWRERENR*PSRAARRGEADRPS
Trigger: ACTGGGTCTGTCGGCCTCCCCACGCCTGGCAGCCCGTGAGGGCCAGCGATTCTCCCTCTCTCTCCACAGTGAGAGCAAGGTGCTAATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
ENST00000575346.1
CDS CCA 90 bp CAGGGGCCCAGTCCTGCCTCAGGGCTGGTGCTTCTCTGGGCCACATaGGGAGCCATGTTGAGTCCAGAGAGCGGAAACTTCACCAGCGTG +
Preference number: 5 (lower is better)
Translates to: QGPSPASGLVLLWAT*GAMLSPESGNFTSV
Trigger: CACGCTGGTGAAGTTTCCGCTCTCTGGACTCAACATGGCTCCCCATGTGGCCCAGAGAAGCACCAGCCCTGAGGCAGGACTGGGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 90 bp CAGGAAGGCCAGGGGCCCAGTCCTGCCTCAGGGCTGGTGCTTCTCTaGGCCACATGGGGAGCCATGTTGAGTCCAGAGAGCGGAAACTTC +
Preference number: 5 (lower is better)
Translates to: QEGQGPSPASGLVLL*ATWGAMLSPESGNF
Trigger: GAAGTTTCCGCTCTCTGGACTCAACATGGCTCCCCATGTGGCCCAGAGAAGCACCAGCCCTGAGGCAGGACTGGGCCCCTGGCCTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 90 bp CAGTCCTTTGTGACATGCCCAGTGCACTGCCTCTCGGGGCCCTGCTaGCTTTACGAGGGAGGCGGAGAGAGCTGGGGGCTGACCAGACAT +
Preference number: 5 (lower is better)
Translates to: QSFVTCPVHCLSGPC*LYEGGGESWGLTRH
Trigger: ATGTCTGGTCAGCCCCCAGCTCTCTCCGCCTCCCTCGTAAAGCCAGCAGGGCCCCGAGAGGCAGTGCACTGGGCATGTCACAAAGGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS TCA 90 bp CTTCCCCTTGTGCTGCCAGCGTGGCTCCCGAGCCGTAAGAGCCAGTaGTCAGACAGGGAGGAGCTGGTAGAGCCTCTCATGGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LPLVLPAWLPSRKSQ*SDREELVEPLMELL
Trigger: CAGCAGCTCCATGAGAGGCTCTACCAGCTCCTCCCTGTCTGATCACTGGCTCTTACGGCTCGGGAGCCACGCTGGCAGCACAAGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS GCA 90 bp CGACGTTGGACCTCGGCGATGCTGACTTCTCATCCTCACCCGCAGTaGCCGTCAACAGCGACACAATGGACTGGCTCGTGGACCGAGGTC +
Preference number: 5 (lower is better)
Translates to: RRWTSAMLTSHPHPQ*PSTATQWTGSWTEV
Trigger: GACCTCGGTCCACGAGCCAGTCCATTGTGTCGCTGTTGACGGGCACTGCGGGTGAGGATGAGAAGTCAGCATCGCCGAGGTCCAACGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS TCA 90 bp GTGTTTGGACCATCTGAGTTTCCAGGGGCCAGACAGTGGTTGGGTTaGGCCGAGGGACAGGGCACCCCGGCTGGACCTCTTTCAATGGCC +
Preference number: 5 (lower is better)
Translates to: VFGPSEFPGARQWLG*AEGQGTPAGPLSMA
Trigger: GGCCATTGAAAGAGGTCCAGCCGGGGTGCCCTGTCCCTCGGCTCAACCCAACCACTGTCTGGCCCCTGGAAACTCAGATGGTCCAAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 90 bp ACTGTGCTGAGGATCGGCACGGCCAGGCCAACCCGCAGGAACCGCTaGCTCTTAGAGGGGAAGACCAAGGTGACACTCAAGAACCTCGTC +
Preference number: 5 (lower is better)
Translates to: TVLRIGTARPTRRNR*LLEGKTKVTLKNLV
Trigger: GACGAGGTTCTTGAGTGTCACCTTGGTCTTCCCCTCTAAGAGCCAGCGGTTCCTGCGGGTTGGCCTGGCCGTGCCGATCCTCAGCACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
ENST00000575346.1
CDS CCA 90 bp GCGCTCCTTGACAGAGCTATCCCACTCCACCGCCAGCTTGACATGTaGAGGGCCTCCTGGCCTCCTGAGATGCAAAACCCTGTCAACTGC +
Preference number: 5 (lower is better)
Translates to: ALLDRAIPLHRQLDM*RASWPPEMQNPVNC
Trigger: GCAGTTGACAGGGTTTTGCATCTCAGGAGGCCAGGAGGCCCTCCACATGTCAAGCTGGCGGTGGAGTGGGATAGCTCTGTCAAGGAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
CDS TCA 90 bp TTTAGTGGCTTCAGGCGGAAGCTTCTCCGACACCGGCCCTCGGGATaGACCCTCCAGGTCCTCATGTACACGATCCAGCAACCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: FSGFRRKLLRHRPSG*TLQVLMYTIQQPEQ
Trigger: CTGCTCTGGTTGCTGGATCGTGTACATGAGGACCTGGAGGGTTCATCCCGAGGGCCGGTGTCGGAGAAGCTTCCGCCTGAAGCCACTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
CDS TCA 90 bp CTGCCTCAGGGCTGGTGCTTCTCTGGGCCACATGGGGAGCCATGTTaGGTCCAGAGAGCGGAAACTTCACCAGCGTGGAGAGCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: LPQGWCFSGPHGEPC*VQRAETSPAWRACF
Trigger: GAAACAAGCTCTCCACGCTGGTGAAGTTTCCGCTCTCTGGACTCAACATGGCTCCCCATGTGGCCCAGAGAAGCACCAGCCCTGAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS TCA 90 bp CATTCCTCCTGTTCTCCTTCTTCCGAAACACGGACCTCAGAAGGGTaGGTGTCCCCTGCAGGGGTCTGTCTAGCTCAGAGGTGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: HSSCSPSSETRTSEG*VSPAGVCLAQRCLG
Trigger: GCCGAGGCACCTCTGAGCTAGACAGACCCCTGCAGGGGACACTCACCCTTCTGAGGTCCGTGTTTCGGAAGAAGGAGAACAGGAGGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS TCA 90 bp CTGAAAGGTGCCATAAGAAGCCTGCTCCCCTGGAACAGTCCTTTGTaGCATGCCCAGTGCACTGCCTCTCGGGGCCCTGCTGGCTTTACG +
Preference number: 5 (lower is better)
Translates to: LKGAIRSLLPWNSPL*HAQCTASRGPAGFT
Trigger: CGTAAAGCCAGCAGGGCCCCGAGAGGCAGTGCACTGGGCATGTCACAAAGGACTGTTCCAGGGGAGCAGGCTTCTTATGGCACCTTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS GCA 90 bp CCTGCTGCCCTGACCCCACCAAGTTACAGAAGAGGATTAGCACCTTaGTCTCACTGTGGAGAGAGAGGGAGAATCGCTGGCCCTCACGGG +
Preference number: 5 (lower is better)
Translates to: PAALTPPSYRRGLAP*SHCGERGRIAGPHG
Trigger: CCCGTGAGGGCCAGCGATTCTCCCTCTCTCTCCACAGTGAGAGCAAGGTGCTAATCCTCTTCTGTAACTTGGTGGGGTCAGGGCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
ENST00000575346.1
CDS GCA 90 bp CTGCCCAGTGACAGAGGGGCCGACTGTCCTTCGGAGACAAATAGCTaGAGGCCACAGAGAGTCCCACAACACGGATGGAGAACAGAGACC +
Preference number: 5 (lower is better)
Translates to: LPSDRGADCPSETNS*RPQRVPQHGWRTET
Trigger: GGTCTCTGTTCTCCATCCGTGTTGTGGGACTCTCTGTGGCCTGCAGCTATTTGTCTCCGAAGGACAGTCGGCCCCTCTGTCACTGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
CDS CCA 90 bp GACCCCACCAAGTTACAGAAGAGGATTAGCACCTTGCTCTCACTGTaGAGAGAGAGGGAGAATCGCTGGCCCTCACGGGCTGCCAGGCGT +
Preference number: 5 (lower is better)
Translates to: DPTKLQKRISTLLSL*RERENRWPSRAARR
Trigger: ACGCCTGGCAGCCCGTGAGGGCCAGCGATTCTCCCTCTCTCTCCACAGTGAGAGCAAGGTGCTAATCCTCTTCTGTAACTTGGTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
ENST00000575346.1
CDS CCA 90 bp AGAGCTATCCCACTCCACCGCCAGCTTGACATGTGGAGGGCCTCCTaGCCTCCTGAGATGCAAAACCCTGTCAACTGCCCAGTGACAGAG +
Preference number: 5 (lower is better)
Translates to: RAIPLHRQLDMWRAS*PPEMQNPVNCPVTE
Trigger: CTCTGTCACTGGGCAGTTGACAGGGTTTTGCATCTCAGGAGGCCAGGAGGCCCTCCACATGTCAAGCTGGCGGTGGAGTGGGATAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
CDS CCA 90 bp CCTCACCCGCAGTGCCCGTCAACAGCGACACAATGGACTGGCTCGTaGACCGAGGTCTTCGTCTGGATTCCAAGTACTCCACCAACTCGA +
Preference number: 5 (lower is better)
Translates to: PHPQCPSTATQWTGS*TEVFVWIPSTPPTR
Trigger: TCGAGTTGGTGGAGTACTTGGAATCCAGACGAAGACCTCGGTCCACGAGCCAGTCCATTGTGTCGCTGTTGACGGGCACTGCGGGTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 90 bp TTGCTGTGTTTGGACCATCTGAGTTTCCAGGGGCCAGACAGTGGTTaGGTTGAGCCGAGGGACAGGGCACCCCGGCTGGACCTCTTTCAA +
Preference number: 5 (lower is better)
Translates to: LLCLDHLSFQGPDSG*VEPRDRAPRLDLFQ
Trigger: TTGAAAGAGGTCCAGCCGGGGTGCCCTGTCCCTCGGCTCAACCCAACCACTGTCTGGCCCCTGGAAACTCAGATGGTCCAAACACAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS TCA 90 bp GTGGTTTCTCCTTGGATCCAAAGGACCACCGCAGAGGCATGGTCTTaGATGGTCCCTGCTTGGCTCGGGAAGTGGTGGGTGCCTTCATGC +
Preference number: 5 (lower is better)
Translates to: VVSPWIQRTTAEAWS*MVPAWLGKWWVPSC
Trigger: GCATGAAGGCACCCACCACTTCCCGAGCCAAGCAGGGACCATTCAAGACCATGCCTCTGCGGTGGTCCTTTGGATCCAAGGAGAAACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS TCA 90 bp ATCTTCGCTGTTAGCAGGAAGGGCGACGTTGGACCTCGGCGATGCTaGCTTCTCATCCTCACCCGCAGTGCCCGTCAACAGCGACACAAT +
Preference number: 5 (lower is better)
Translates to: IFAVSRKGDVGPRRC*LLILTRSARQQRHN
Trigger: ATTGTGTCGCTGTTGACGGGCACTGCGGGTGAGGATGAGAAGTCAGCATCGCCGAGGTCCAACGTCGCCCTTCCTGCTAACAGCGAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS TCA 90 bp TGGGGACAAGTCAAGGAAGATCTTCTCCGACACCGGCCCTCGGGATaGACCCTCCAGGTCCTCATGTACACGATCCAGCAACCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: WGQVKEDLLRHRPSG*TLQVLMYTIQQPEQ
Trigger: CTGCTCTGGTTGCTGGATCGTGTACATGAGGACCTGGAGGGTTCATCCCGAGGGCCGGTGTCGGAGAAGATCTTCCTTGACTTGTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574408.5
CDS GCA 90 bp CCTGCAGGGGTCTGTCTAGCTCAGAGGTGCCTCGGCGACTGTCTTTaGTGTTTCCAGAGAATCCCATATAGGGGGAGGGTGGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: PAGVCLAQRCLGDCL*CFQRIPYRGRVGCF
Trigger: AAAGCAGCCCACCCTCCCCCTATATGGGATTCTCTGGAAACAGCAAAGACAGTCGCCGAGGCACCTCTGAGCTAGACAGACCCCTGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS GCA 90 bp TTCTCCTTCTTCCGAAACACGGACCTCAGAAGGGTGAGTGTCCCCTaGAGGGGTCTGTCTAGCTCAGAGGTGCCTCGGCGACTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: FSFFRNTDLRRVSVP*RGLSSSEVPRRLSL
Trigger: CAAAGACAGTCGCCGAGGCACCTCTGAGCTAGACAGACCCCTGCAGGGGACACTCACCCTTCTGAGGTCCGTGTTTCGGAAGAAGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 90 bp TTCTCATCCTCACCCGCAGTGCCCGTCAACAGCGACACAATGGACTaGCTCGTGGACCGAGGTCTTCGTCTGGATTCCAAGTACTCCACC +
Preference number: 5 (lower is better)
Translates to: FSSSPAVPVNSDTMD*LVDRGLRLDSKYST
Trigger: GGTGGAGTACTTGGAATCCAGACGAAGACCTCGGTCCACGAGCCAGTCCATTGTGTCGCTGTTGACGGGCACTGCGGGTGAGGATGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAACAGCAGGCTTCCCCTaGTGCTGCCAGCGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASTAGFP*CCQRGS
Trigger: GGAGCCACGCTGGCAGCACAAGGGGAAGCCTGCTGT...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCACAGCAGGCTTCCCCTaGTGCTGCCAGCGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: SCLAKSQECQRHTILTRSTAGFP*CCQRGS
Trigger: GGAGCCACGCTGGCAGCACAAGGGGAAGCCTGCTGT...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCGCAGGAAGGGCGACGTaGGACCTCGGCGATGCTGAC +
Preference number: 5 (lower is better)
Translates to: SCLAKSQECQRHTILTRSAGRAT*DLGDAD
Trigger: GTCAGCATCGCCGAGGTCCAACGTCGCCCTTCCTGC...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS CCA 90 bp TCAACAGCGACACAATGGACTGGCTCGTGGACCGAGGTCTTCGTCTaGATTCCAAGTACTCCACCAACTCGACGGAGGCACCTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: STATQWTGSWTEVFV*IPSTPPTRRRHLVV
Trigger: AACCACCAGGTGCCTCCGTCGAGTTGGTGGAGTACTTGGAATCCAGACGAAGACCTCGGTCCACGAGCCAGTCCATTGTGTCGCTGTTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 90 bp CTGACTTCTCATCCTCACCCGCAGTGCCCGTCAACAGCGACACAATaGACTGGCTCGTGGACCGAGGTCTTCGTCTGGATTCCAAGTACT +
Preference number: 5 (lower is better)
Translates to: LTSHPHPQCPSTATQ*TGSWTEVFVWIPST
Trigger: AGTACTTGGAATCCAGACGAAGACCTCGGTCCACGAGCCAGTCCATTGTGTCGCTGTTGACGGGCACTGCGGGTGAGGATGAGAAGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCACTCCACCGCCAGCTaGACATGTGGAGGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: SQHELPTVAWQSPKNASVHSTAS*TCGGPP
Trigger: AGGAGGCCCTCCACATGTCAAGCTGGCGGTGGAGTG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CAA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACAGCAGGCTTCCCCTaGTGCTGCCAGCGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNTAGFP*CCQRGS
Trigger: GGAGCCACGCTGGCAGCACAAGGGGAAGCCTGCTGT...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGGCAGGAAGGGCGACGTaGGACCTCGGCGATGCTGAC +
Preference number: 5 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWAGRAT*DLGDAD
Trigger: GTCAGCATCGCCGAGGTCCAACGTCGCCCTTCCTGC...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS GCA 90 bp TTGGATCCAAAGGACCACCGCAGAGGCATGGTCTTGAATGGTCCCTaGTTGGCTCGGGAAGTGGTGGGTGCCTTCATGCTAATGCTTCTG +
Preference number: 5 (lower is better)
Translates to: LDPKDHRRGMVLNGP*LAREVVGAFMLMLL
Trigger: CAGAAGCATTAGCATGAAGGCACCCACCACTTCCCGAGCCAAGCAGGGACCATTCAAGACCATGCCTCTGCGGTGGTCCTTTGGATCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 90 bp TCGTCTGGATTCCAAGTACTCCACCAACTCGACGGAGGCACCTGGTaGTTTCTCCTTGGATCCAAAGGACCACCGCAGAGGCATGGTCTT +
Preference number: 5 (lower is better)
Translates to: SSGFQVLHQLDGGTW*FLLGSKGPPQRHGL
Trigger: AAGACCATGCCTCTGCGGTGGTCCTTTGGATCCAAGGAGAAACCACCAGGTGCCTCCGTCGAGTTGGTGGAGTACTTGGAATCCAGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 90 bp TCTTCGTCTGGATTCCAAGTACTCCACCAACTCGACGGAGGCACCTaGTGGTTTCTCCTTGGATCCAAAGGACCACCGCAGAGGCATGGT +
Preference number: 5 (lower is better)
Translates to: SSSGFQVLHQLDGGT*WFLLGSKGPPQRHG
Trigger: ACCATGCCTCTGCGGTGGTCCTTTGGATCCAAGGAGAAACCACCAGGTGCCTCCGTCGAGTTGGTGGAGTACTTGGAATCCAGACGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCCGAACAGGCGCTCCTaGACAGAGCTATCCCACTCC +
Preference number: 5 (lower is better)
Translates to: SQHELPTVAWQSPKNASVPNRRS*TELSHS
Trigger: GGAGTGGGATAGCTCTGTCAAGGAGCGCCTGTTCGG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CAA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCATGCCCACCTTGCAGGTaGCCATGGTGGTTGCAGACG +
Preference number: 5 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASCPPCR*PWWLQT
Trigger: CGTCTGCAACCACCATGGCAACCTGCAAGGTGGGCA...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAGCAGGAAGGGCGACGTaGGACCTCGGCGATGCTGAC +
Preference number: 5 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGAGRAT*DLGDAD
Trigger: GTCAGCATCGCCGAGGTCCAACGTCGCCCTTCCTGC...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS CCA 90 bp TTTCTCCTTGGATCCAAAGGACCACCGCAGAGGCATGGTCTTGAATaGTCCCTGCTTGGCTCGGGAAGTGGTGGGTGCCTTCATGCTAAT +
Preference number: 5 (lower is better)
Translates to: FLLGSKGPPQRHGLE*SLLGSGSGGCLHAN
Trigger: ATTAGCATGAAGGCACCCACCACTTCCCGAGCCAAGCAGGGACCATTCAAGACCATGCCTCTGCGGTGGTCCTTTGGATCCAAGGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGACACTCCACCGCCAGCTaGACATGTGGAGGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGHSTAS*TCGGPP
Trigger: AGGAGGCCCTCCACATGTCAAGCTGGCGGTGGAGTG...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CAA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATCCGAACAGGCGCTCCTaGACAGAGCTATCCCACTCC +
Preference number: 5 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNPNRRS*TELSHS
Trigger: GGAGTGGGATAGCTCTGTCAAGGAGCGCCTGTTCGG...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CAA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGCCCCTGCTGCAGGACTaGGCAGTGAGGACACTTCCA +
Preference number: 5 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWPLLQD*AVRTLP
Trigger: TGGAAGTGTCCTCACTGCCAAGTCCTGCAGCAGGGG...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATCCCCTGCTGCAGGACTaGGCAGTGAGGACACTTCCA +
Preference number: 5 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNPLLQD*AVRTLP
Trigger: TGGAAGTGTCCTCACTGCCAAGTCCTGCAGCAGGGG...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCTTGAATGGTCCCTGCTaGGCTCGGGAAGTGGTGGGT +
Preference number: 5 (lower is better)
Translates to: SCLAKSQECQRHTILTRSLNGPC*AREVVG
Trigger: ACCCACCACTTCCCGAGCCAAGCAGGGACCATTCAA...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCATTGAATGGTCCCTGCTaGGCTCGGGAAGTGGTGGGT +
Preference number: 5 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASLNGPC*AREVVG
Trigger: ACCCACCACTTCCCGAGCCAAGCAGGGACCATTCAA...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCCTGGTGGTTTCTCCTaGGATCCAAAGGACCACCGC +
Preference number: 5 (lower is better)
Translates to: SQHELPTVAWQSPKNASVPGGFS*DPKDHR
Trigger: GCGGTGGTCCTTTGGATCCAAGGAGAAACCACCAGG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTCAGACAGTGGTTGGGTaGAGCCGAGGGACAGGGCAC +
Preference number: 5 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPQTVVG*SRGTGH
Trigger: GTGCCCTGTCCCTCGGCTCAACCCAACCACTGTCTG...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGACAGACAGTGGTTGGGTaGAGCCGAGGGACAGGGCAC +
Preference number: 5 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGQTVVG*SRGTGH
Trigger: GTGCCCTGTCCCTCGGCTCAACCCAACCACTGTCTG...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAGAGGGTGGGCTGCTTTaGCTTCCCATCTGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASEGGLL*LPIWKL
Trigger: GAGCTTCCAGATGGGAAGCAAAAGCAGCCCACCCTC...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS TCA 90 bp CAGAGCAGGAATTCCAGGGCGTCGTGCTGGGAATTGCCTTGGAACTaGGAGCCGTACTTGGAAACTGCATTCTTGAACTCCGCGGAAAGT +
Preference number: 5 (lower is better)
Translates to: QSRNSRASCWELPWN*EPYLETAFLNSAES
Trigger: ACTTTCCGCGGAGTTCAAGAATGCAGTTTCCAAGTACGGCTCTCAGTTCCAAGGCAATTCCCAGCACGACGCCCTGGAATTCCTGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000570475.5
CDS CCA 90 bp GAGAGCTTGTTTCTTCTCTCGCCCACCTGGCAGAACCTTTTGAGGTaGATGATGAGGATGTCAGGCAGCGTCCACAAACTCAGCTTCACC +
Preference number: 5 (lower is better)
Translates to: ESLFLLSPTWQNLLR*MMRMSGSVHKLSFT
Trigger: GGTGAAGCTGAGTTTGTGGACGCTGCCTGACATCCTCATCATCCACCTCAAAAGGTTCTGCCAGGTGGGCGAGAGAAGAAACAAGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGGAACTCCGCGGAAAGTaGGGGCGTGTATTCGCGAGT +
Preference number: 5 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWELRGK*GRVFAS
Trigger: ACTCGCGAATACACGCCCCAACTTTCCGCGGAGTTC...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285199.12
CDS-3UTR CAA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTCCCCTGCTGCAGGACTaGGCAGTGAGGACACTTCCA +
Preference number: 5 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGPLLQD*AVRTLP
Trigger: TGGAAGTGTCCTCACTGCCAAGTCCTGCAGCAGGGG...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGACCAGCGTGGAGAGCTaGTTTCTTCTCTCGCCCACC +
Preference number: 5 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWTSVES*FLLSPT
Trigger: GGTGGGCGAGAGAAGAAACAAGCTCTCCACGCTGGT...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGCCCACCTTGCAGGTaGCCATGGTGGTTGCAGACG +
Preference number: 5 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPCPPCR*PWWLQT
Trigger: CGTCTGCAACCACCATGGCAACCTGCAAGGTGGGCA...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTTGCCCACCTTGCAGGTaGCCATGGTGGTTGCAGACG +
Preference number: 5 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGCPPCR*PWWLQT
Trigger: CGTCTGCAACCACCATGGCAACCTGCAAGGTGGGCA...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATCGCAGAGGCATGGTCTaGAATGGTCCCTGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNRRGMV*NGPCLA
Trigger: AGCCAAGCAGGGACCATTCAAGACCATGCCTCTGCG...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGCCTGGTGGTTTCTCCTaGGATCCAAAGGACCACCGC +
Preference number: 5 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWPGGFS*DPKDHR
Trigger: GCGGTGGTCCTTTGGATCCAAGGAGAAACCACCAGG...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATCCTGGTGGTTTCTCCTaGGATCCAAAGGACCACCGC +
Preference number: 5 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNPGGFS*DPKDHR
Trigger: GCGGTGGTCCTTTGGATCCAAGGAGAAACCACCAGG...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCCCTCGGCGACTGTCTTaGCTGTTTCCAGAGAATCCC +
Preference number: 5 (lower is better)
Translates to: SCLAKSQECQRHTILTRSPRRLS*LFPENP
Trigger: GGGATTCTCTGGAAACAGCAAAGACAGTCGCCGAGG...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS GCA 90 bp GATCCAGCAACCAGAGCAGGAATTCCAGGGCGTCGTGCTGGGAATTaGCTTGGAACTGAGAGCCGTACTTGGAAACTGCATTCTCGTAAA +
Preference number: 5 (lower is better)
Translates to: DPATRAGIPGRRAGN*LGTESRTWKLHSRK
Trigger: TTTACGAGAATGCAGTTTCCAAGTACGGCTCTCAGTTCCAAGGCAATTCCCAGCACGACGCCCTGGAATTCCTGCTCTGGTTGCTGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570827.6
CDS-3UTR CAA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCATAAGATGGCGGACCTaGCTGAGGATAGACTGCTGG +
Preference number: 5 (lower is better)
Translates to: SQHELPTVAWQSPKNASVIRWRT*LRIDCW
Trigger: CCAGCAGTCTATCCTCAGCAAGGTCCGCCATCTTAT...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CAA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTACCAGCGTGGAGAGCTaGTTTCTTCTCTCGCCCACC +
Preference number: 5 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGTSVES*FLLSPT
Trigger: GGTGGGCGAGAGAAGAAACAAGCTCTCCACGCTGGT...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACATGGGGAGCCATGTaGAGTCCAGAGAGCGGAAAC +
Preference number: 5 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNTWGAM*SPESGN
Trigger: GTTTCCGCTCTCTGGACTCAACATGGCTCCCCATGT...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCATGTGTAATGCCCACCTaGCAGGTTGCCATGGTGGTT +
Preference number: 5 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASCVMPT*QVAMVV
Trigger: AACCACCATGGCAACCTGCAAGGTGGGCATTACACA...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCTGTGTAATGCCCACCTaGCAGGTTGCCATGGTGGTT +
Preference number: 5 (lower is better)
Translates to: SCLAKSQECQRHTILTRSCVMPT*QVAMVV
Trigger: AACCACCATGGCAACCTGCAAGGTGGGCATTACACA...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCTGTGTAATGCCCACCTaGCAGGTTGCCATGGTGGTT +
Preference number: 5 (lower is better)
Translates to: SQHELPTVAWQSPKNASVCVMPT*QVAMVV
Trigger: AACCACCATGGCAACCTGCAAGGTGGGCATTACACA...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTTTGAATGGTCCCTGCTaGGCTCGGGAAGTGGTGGGT +
Preference number: 5 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGLNGPC*AREVVG
Trigger: ACCCACCACTTCCCGAGCCAAGCAGGGACCATTCAA...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGACGCAGAGGCATGGTCTaGAATGGTCCCTGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGRRGMV*NGPCLA
Trigger: AGCCAAGCAGGGACCATTCAAGACCATGCCTCTGCG...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGAGGGTGGGCTGCTTTaGCTTCCCATCTGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGEGGLL*LPIWKL
Trigger: GAGCTTCCAGATGGGAAGCAAAAGCAGCCCACCCTC...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS TCA 90 bp AGGCAGTGGGGACAAGTCAAGGAAGATCTTGGGCTTTCCATTCCTTaGACTTGCCAGGATTATTCCCACTTCTGGCCCTTTGCCTGTGCT +
Preference number: 5 (lower is better)
Translates to: RQWGQVKEDLGLSIP*TCQDYSHFWPFACA
Trigger: AGCACAGGCAAAGGGCCAGAAGTGGGAATAATCCTGGCAAGTTCAAGGAATGGAAAGCCCAAGATCTTCCTTGACTTGTCCCCACTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575346.1
CDS-3UTR CAA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACCTGGCAGAACCTTTaGAGGTGGATGATGAGGATG +
Preference number: 5 (lower is better)
Translates to: SQHELPTVAWQSPKNASVTWQNL*RWMMRM
Trigger: CATCCTCATCATCCACCTCAAAAGGTTCTGCCAGGT...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAACATGGGGAGCCATGTaGAGTCCAGAGAGCGGAAAC +
Preference number: 5 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGTWGAM*SPESGN
Trigger: GTTTCCGCTCTCTGGACTCAACATGGCTCCCCATGT...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCGCAGAGGCATGGTCTaGAATGGTCCCTGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHRRGMV*NGPCLA
Trigger: AGCCAAGCAGGGACCATTCAAGACCATGCCTCTGCG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACGAGGGTGGGCTGCTTTaGCTTCCCATCTGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHEGGLL*LPIWKL
Trigger: GAGCTTCCAGATGGGAAGCAAAAGCAGCCCACCCTC...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATGCTGCCTACAGTTGCTaGGCAAAGTCCCAAGAATGC +
Preference number: 5 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNAAYSC*AKSQEC
Trigger: GCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGC...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCATGAGCTGCCTACAGTaGCTTGGCAAAGTCCCAAGA +
Preference number: 5 (lower is better)
Translates to: SCLAKSQECQRHTILTRSMSCLQ*LGKVPR
Trigger: TCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCGGAAGGTTTTCGACCTaGGGTTATATGGACCTTGGG +
Preference number: 5 (lower is better)
Translates to: SCLAKSQECQRHTILTRSGRFST*GYMDLG
Trigger: CCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCC...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS GCA 90 bp TTCCATTCCTTGAACTTGCCAGGATTATTCCCACTTCTGGCCCTTTaGCTGTGCTGTGTCCTCTGCCTGGAATACTCTGTGCCCAGTTAT +
Preference number: 5 (lower is better)
Translates to: FHSLNLPGLFPLLAL*LCCVLCLEYSVPSY
Trigger: ATAACTGGGCACAGAGTATTCCAGGCAGAGGACACAGCACAGGCAAAGGGCCAGAAGTGGGAATAATCCTGGCAAGTTCAAGGAATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575346.1
CDS CCA 90 bp TGGTATTCAGGTCCTCTTCATCAAAGAAAGACCGCTGGAATCCACTaGGATACAGTTCAACCAAGATCACCTCATCTGCAGGGACGCCTC +
Preference number: 5 (lower is better)
Translates to: WYSGPLHQRKTAGIH*DTVQPRSPHLQGRL
Trigger: GAGGCGTCCCTGCAGATGAGGTGATCTTGGTTGAACTGTATCCCAGTGGATTCCAGCGGTCTTTCTTTGATGAAGAGGACCTGAATACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
ENST00000575346.1
CDS-3UTR CAA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCTTGGAAACTGCATTCTaGAACTCCGCGGAAAGTTGG +
Preference number: 5 (lower is better)
Translates to: SCLAKSQECQRHTILTRSLETAF*NSAESW
Trigger: CCAACTTTCCGCGGAGTTCAAGAATGCAGTTTCCAA...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285199.12
CDS-3UTR CAA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAAGAGGATTAGCACCTaGCTCTCACTGTGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWKRIST*LSLWRE
Trigger: CTCTCTCCACAGTGAGAGCAAGGTGCTAATCCTCTT...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CAA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTATAAGATGGCGGACCTaGCTGAGGATAGACTGCTGG +
Preference number: 5 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPIRWRT*LRIDCW
Trigger: CCAGCAGTCTATCCTCAGCAAGGTCCGCCATCTTAT...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000574408.5
CDS-3UTR CAA 90 bp CTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCAGTTTCCTTGCTGTGTTaGGACCATCTGAGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: LNMSCLQLLGKVPRMPASVSLLC*DHLSFQ
Trigger: CTGGAAACTCAGATGGTCCAAACACAGCAAGGAAAC...TGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACCCTCGGCGACTGTCTTaGCTGTTTCCAGAGAATCCC +
Preference number: 5 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHPRRLS*LFPENP
Trigger: GGGATTCTCTGGAAACAGCAAAGACAGTCGCCGAGG...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp TCTCAACATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCCCAGCCTCATCTTGTTaGCCCACATCCAAAACTCTT +
Preference number: 5 (lower is better)
Translates to: SQHELPTVAWQSPKNASVPASSC*PTSKTL
Trigger: AAGAGTTTTGGATGTGGGCAAACAAGATGAGGCTGG...GACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCATGTTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS CCA 90 bp CCCTCTGCGATGGTATTCAGGTCCTCTTCATCAAAGAAAGACCGCTaGAATCCACTGGGATACAGTTCAACCAAGATCACCTCATCTGCA +
Preference number: 5 (lower is better)
Translates to: PSAMVFRSSSSKKDR*NPLGYSSTKITSSA
Trigger: TGCAGATGAGGTGATCTTGGTTGAACTGTATCCCAGTGGATTCCAGCGGTCTTTCTTTGATGAAGAGGACCTGAATACCATCGCAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
ENST00000575346.1
CDS-3UTR CAA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTTTCATGAAACAGGTGTaGCCGTGGTTCTTCAAGCCC +
Preference number: 5 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPFMKQV*PWFFKP
Trigger: GGGCTTGAAGAACCACGGCAACACCTGTTTCATGAA...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285199.12
CDS-3UTR CAA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTACCTGGCAGAACCTTTaGAGGTGGATGATGAGGATG +
Preference number: 5 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGTWQNL*RWMMRM
Trigger: CATCCTCATCATCCACCTCAAAAGGTTCTGCCAGGT...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATGTTTCCTTGCTGTGTTaGGACCATCTGAGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNVSLLC*DHLSFQ
Trigger: CTGGAAACTCAGATGGTCCAAACACAGCAAGGAAAC...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACGCTGCCTACAGTTGCTaGGCAAAGTCCCAAGAATGC +
Preference number: 5 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHAAYSC*AKSQEC
Trigger: GCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGC...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAGGAAGGTTTTCGACCTaGGGTTATATGGACCTTGGG +
Preference number: 5 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGGRFST*GYMDLG
Trigger: CCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCC...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp CCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGCCAGCCTCATCTTGTTaGCCCACATCCAAAACTCTT +
Preference number: 5 (lower is better)
Translates to: PNDAGRFSTLGYMDLGCWPASSC*PTSKTL
Trigger: AAGAGTTTTGGATGTGGGCAAACAAGATGAGGCTGG...CCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS GCA 90 bp ATCACAGTGAGAGGCAGGTCAAACTTTCTGGGAAGCTTGATGTCCTaGCCTGCATTTTCCTTGAGTTTCCTTGCTGTGTTTGGACCATCT +
Preference number: 5 (lower is better)
Translates to: ITVRGRSNFLGSLMS*PAFSLSFLAVFGPS
Trigger: AGATGGTCCAAACACAGCAAGGAAACTCAAGGAAAATGCAGGGCAGGACATCAAGCTTCCCAGAAAGTTTGACCTGCCTCTCACTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACACCTGGCAGAACCTTTaGAGGTGGATGATGAGGATG +
Preference number: 5 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHTWQNL*RWMMRM
Trigger: CATCCTCATCATCCACCTCAAAAGGTTCTGCCAGGT...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp TCTAGTGGCCAAACTGTAGCAAAGCACCCAATGATGCAGGAAGGTTTTCGACCTAACTTTCTGGGAAGCTaGATGTCCTGCCCTGCATTT +
Preference number: 5 (lower is better)
Translates to: SSGQTVAKHPMMQEGFRPNFLGS*MSCPAF
Trigger: AAATGCAGGGCAGGACATCAAGCTTCCCAGAAAGTT...AGGTCGAAAACCTTCCTGCATCATTGGGTGCTTTGCTACAGTTTGGCCACTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGAAACTTTCTGGGAAGCTaGATGTCCTGCCCTGCATTT +
Preference number: 5 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGNFLGS*MSCPAF
Trigger: AAATGCAGGGCAGGACATCAAGCTTCCCAGAAAGTT...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp ATGAGCTGCCTACAGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATTGGGTTATATGGACCTaGGGTGTTGGAAGTCTAGAT +
Preference number: 5 (lower is better)
Translates to: MSCLQLLGKVPRMPASHNWVIWT*GVGSLD
Trigger: ATCTAGACTTCCAACACCCAAGGTCCATATAACCCA...ATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACTGTAGGCAGCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTCCAGCCTCATCTTGTTaGCCCACATCCAAAACTCTT +
Preference number: 5 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGPASSC*PTSKTL
Trigger: AAGAGTTTTGGATGTGGGCAAACAAGATGAGGCTGG...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCCAAGGAAGATCTATATaGTGCTTGAAAGTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: SCLAKSQECQRHTILTRSQGRSI*CLKVAL
Trigger: CAAAGCCACTTTCAAGCACAATATAGATCTTCCTTG...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285199.12
CDS-3UTR CAA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACGTTTCCTTGCTGTGTTaGGACCATCTGAGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHVSLLC*DHLSFQ
Trigger: CTGGAAACTCAGATGGTCCAAACACAGCAAGGAAAC...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp AAGCACCCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTTGGGTTATATGGACCTaGGGTGTTGGAAGTCTAGAT +
Preference number: 5 (lower is better)
Translates to: KHPMMQEGFRPWVIWTLGWVIWT*GVGSLD
Trigger: ATCTAGACTTCCAACACCCAAGGTCCATATAACCCA...ACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGGGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp AGTTGCTTGGCAAAGTCCCAAGAATGCCAGCGTCACACAATACTGACACGCTCCCTCTTTGCTAGAATCTaGCCTTACCATCACTATCAT +
Preference number: 5 (lower is better)
Translates to: SCLAKSQECQRHTILTRSLFARI*PYHHYH
Trigger: ATGATAGTGATGGTAAGGCAAGATTCTAGCAAAGAG...GGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTGGGACTTTGCCAAGCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS CCA 90 bp CAAGAATGCCAGCGTCACACAATACTGACACGCTCCATCAAAAGCTaGACTCCGGTAAGGTTTTCTTTCGACCTAAAGAAAGAGTGTGAT +
Preference number: 5 (lower is better)
Translates to: QECQRHTILTRSIKS*TPVRFSFDLKKECD
Trigger: ATCACACTCTTTCTTTAGGTCGAAAGAAAACCTTACCGGAGTCCAGCTTTTGATGGAGCGTGTCAGTATTGTGTGACGCTGGCATTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp ACTGGTAATACTGACCCAATAGCATCCTCTAGTGGCCAAACTGTAGCAAAGCACTGGGTTATATGGACCTaGGGTGTTGGAAGTCTAGAT +
Preference number: 5 (lower is better)
Translates to: TGNTDPIASSSGQTVAKHWVIWT*GVGSLD
Trigger: ATCTAGACTTCCAACACCCAAGGTCCATATAACCCA...GTGCTTTGCTACAGTTTGGCCACTAGAGGATGCTATTGGGTCAGTATTACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS-3UTR CAA 90 bp CCAATGATGCAGGAAGGTTTTCGACCTTGGGTTATATGGACCTTGGGTGTTGGACTCTTTGCTAGAATCTaGCCTTACCATCACTATCAT +
Preference number: 5 (lower is better)
Translates to: PMMQEGFRPWVIWTLGVGLFARI*PYHHYH
Trigger: ATGATAGTGATGGTAAGGCAAGATTCTAGCAAAGAG...TCCAACACCCAAGGTCCATATAACCCAAGGTCGAAAACCTTCCTGCATCATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000573955.1
ENST00000574408.5
CDS CCA 72 bp CGTGGTGAGAGGCGCGCGCTGGGCGCTGTGTGGGGGTaGGGAGCGCTTTTGTGCACCGCTGGTTCCTCCGCA +
Preference number: 6 (lower is better)
Translates to: RGERRALGAVWG*GALLCTAGSSA
Trigger: TGCGGAGGAACCAGCGGTGCACAAAAGCGCTCCCCACCCCCACACAGCGCCCAGCGCGCGCCTCTCACCACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570827.6
CDS GCA 72 bp TGCGCCTGCTGCTGCTGCCACACACTGTCGGCATCCTaGGCTCGCTCCTCCTGGAGGCTCCCGAACAGGCGC +
Preference number: 6 (lower is better)
Translates to: CACCCCHTLSAS*ARSSWRLPNRR
Trigger: GCGCCTGTTCGGGAGCCTCCAGGAGGAGCGAGCGCAGGATGCCGACAGTGTGTGGCAGCAGCAGCAGGCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
CDS CCA 72 bp GGGCCCTGCTGGCTTTACGAGGGAGGCGGAGAGAGCTaGGGGCTGACCAGACATCCCTCTCGAGCCGGCTGC +
Preference number: 6 (lower is better)
Translates to: GPCWLYEGGGES*GLTRHPSRAGC
Trigger: GCAGCCGGCTCGAGAGGGATGTCTGGTCAGCCCCCAGCTCTCTCCGCCTCCCTCGTAAAGCCAGCAGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS GCA 72 bp TGCGCCTGCTGCTGCTGCCACACACTGTCGGCATCCTaGGCTCGCTCCTCCTGGAGGCTCCCGAACAGGCTG +
Preference number: 6 (lower is better)
Translates to: CACCCCHTLSAS*ARSSWRLPNRL
Trigger: CAGCCTGTTCGGGAGCCTCCAGGAGGAGCGAGCGCAGGATGCCGACAGTGTGTGGCAGCAGCAGCAGGCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573955.1
CDS CCA 72 bp GTGACATGCCCAGTGCACTGCCTCTCGGGGCCCTGCTaGCTTTACGAGGGAGGCGGAGAGAGCTGGGGGCTG +
Preference number: 6 (lower is better)
Translates to: VTCPVHCLSGPC*LYEGGGESWGL
Trigger: CAGCCCCCAGCTCTCTCCGCCTCCCTCGTAAAGCCAGCAGGGCCCCGAGAGGCAGTGCACTGGGCATGTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 72 bp CAGGTGTCGCCACCTCCTTCCAGACCGTCTGCCCCTTaGGGGGAGGCAGAGTCTGTGCCTGCACCCGCCAAC +
Preference number: 6 (lower is better)
Translates to: QVSPPPSRPSAP*GEAESVPAPAN
Trigger: GTTGGCGGGTGCAGGCACAGACTCTGCCTCCCCCCAAGGGGCAGACGGTCTGGAAGGAGGTGGCGACACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570827.6
CDS CCA 72 bp ACCTTGCTCTCACTGTGGAGAGAGAGGGAGAATCGCTaGCCCTCACGGGCTGCCAGGCGTGGGGAGGCCGAC +
Preference number: 6 (lower is better)
Translates to: TLLSLWRERENR*PSRAARRGEAD
Trigger: GTCGGCCTCCCCACGCCTGGCAGCCCGTGAGGGCCAGCGATTCTCCCTCTCTCTCCACAGTGAGAGCAAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
ENST00000575346.1
CDS TCA 72 bp CCTCTGCAACCATCTTCCTCAGGGCTGCCACTGTGCTaGGGATCGGCACGGCCAGGCCAACCCGCAGGAACC +
Preference number: 6 (lower is better)
Translates to: PLQPSSSGLPLC*GSARPGQPAGT
Trigger: GGTTCCTGCGGGTTGGCCTGGCCGTGCCGATCCTCAGCACAGTGGCAGCCCTGAGGAAGATGGTTGCAGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
ENST00000575346.1
CDS TCA 72 bp ATCCTGGGCCAGCTGGAAAGCAAACCACCCGGACTGTaGGGCCCCCGCAGCACGTGGCCAACCCACCAAAGG +
Preference number: 6 (lower is better)
Translates to: ILGQLESKPPGL*GPRSTWPTHQR
Trigger: CCTTTGGTGGGTTGGCCACGTGCTGCGGGGGCCTCACAGTCCGGGTGGTTTGCTTTCCAGCTGGCCCAGGAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573955.1
CDS GCA 72 bp GGGCAGAGCTCCAGGACAGCAGGCTTCCCCTTGTGCTaGCAGCGTGGCTCCCGAGCCGTAAGAGCCAGTGAT +
Preference number: 6 (lower is better)
Translates to: GQSSRTAGFPLC*QRGSRAVRASD
Trigger: ATCACTGGCTCTTACGGCTCGGGAGCCACGCTGGCAGCACAAGGGGAAGCCTGCTGTCCTGGAGCTCTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS GCA 72 bp TTTGTGACATGCCCAGTGCACTGCCTCTCGGGGCCCTaGTGGCTTTACGAGGGAGGCGGAGAGAGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: FVTCPVHCLSGP*WLYEGGGESWG
Trigger: CCCCCAGCTCTCTCCGCCTCCCTCGTAAAGCCAGCAGGGCCCCGAGAGGCAGTGCACTGGGCATGTCACAAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 72 bp CAGGGGCCCAGTCCTGCCTCAGGGCTGGTGCTTCTCTaGGCCACATGGGGAGCCATGTTGAGTCCAGAGAGC +
Preference number: 6 (lower is better)
Translates to: QGPSPASGLVLL*ATWGAMLSPES
Trigger: GCTCTCTGGACTCAACATGGCTCCCCATGTGGCCCAGAGAAGCACCAGCCCTGAGGCAGGACTGGGCCCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 72 bp GTGGTTGGGTTGAGCCGAGGGACAGGGCACCCCGGCTaGACCTCTTTCAATGGCCCGCCCACCATCTTCGCT +
Preference number: 6 (lower is better)
Translates to: VVGLSRGTGHPG*TSFNGPPTIFA
Trigger: AGCGAAGATGGTGGGCGGGCCATTGAAAGAGGTCCAGCCGGGGTGCCCTGTCCCTCGGCTCAACCCAACCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS TCA 72 bp CCATCTGAGTTTCCAGGGGCCAGACAGTGGTTGGGTTaGGCCGAGGGACAGGGCACCCCGGCTGGACCTCTT +
Preference number: 6 (lower is better)
Translates to: PSEFPGARQWLG*AEGQGTPAGPL
Trigger: AAGAGGTCCAGCCGGGGTGCCCTGTCCCTCGGCTCAACCCAACCACTGTCTGGCCCCTGGAAACTCAGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS GCA 72 bp TTGTGCACCGCTGGTTCCTCCGCAGGCTCAGGTGTGTaGGGACAGGTGTCGCCACCTCCTTCCAGACCGTCT +
Preference number: 6 (lower is better)
Translates to: LCTAGSSAGSGV*GQVSPPPSRPS
Trigger: AGACGGTCTGGAAGGAGGTGGCGACACCTGTCCGCACACACCTGAGCCTGCGGAGGAACCAGCGGTGCACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570827.6
CDS CCA 72 bp TGCCACACACTGTCGGCATCCTGCGCTCGCTCCTCCTaGAGGCTCCCGAACAGGCGCTCCTTGACAGAGCTA +
Preference number: 6 (lower is better)
Translates to: CHTLSASCARSS*RLPNRRSLTEL
Trigger: TAGCTCTGTCAAGGAGCGCCTGTTCGGGAGCCTCCAGGAGGAGCGAGCGCAGGATGCCGACAGTGTGTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
CDS CCA 72 bp TTGGACCATCTGAGTTTCCAGGGGCCAGACAGTGGTTaGGTTGAGCCGAGGGACAGGGCACCCCGGCTGGAC +
Preference number: 6 (lower is better)
Translates to: LDHLSFQGPDSG*VEPRDRAPRLD
Trigger: GTCCAGCCGGGGTGCCCTGTCCCTCGGCTCAACCCAACCACTGTCTGGCCCCTGGAAACTCAGATGGTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CAA 90 bp TCAATGGCCCGCCCACCATCTTCGCTGTTAGCAGGAAGGGCGACGTaGGACCTCGGCGATGCTGACTTCTCATCCTCACCCGCAGTGCCC +
Preference number: 6 (lower is better)
Translates to: SMARPPSSLLAGRAT*DLGDADFSSSPAVP
Trigger: GGGCACTGCGGGTGAGGATGAGAAGTCAGCATCGCCGAGGTCCAACGTCGCCCTTCCTGCTAACAGCGAAGATGGTGGGCGGGCCATTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS TCA 72 bp GTGCTGCCAGCGTGGCTCCCGAGCCGTAAGAGCCAGTaGTCAGACAGGGAGGAGCTGGTAGAGCCTCTCATG +
Preference number: 6 (lower is better)
Translates to: VLPAWLPSRKSQ*SDREELVEPLM
Trigger: CATGAGAGGCTCTACCAGCTCCTCCCTGTCTGATCACTGGCTCTTACGGCTCGGGAGCCACGCTGGCAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 72 bp AGGATCGGCACGGCCAGGCCAACCCGCAGGAACCGCTaGCTCTTAGAGGGGAAGACCAAGGTGACACTCAAG +
Preference number: 6 (lower is better)
Translates to: RIGTARPTRRNR*LLEGKTKVTLK
Trigger: CTTGAGTGTCACCTTGGTCTTCCCCTCTAAGAGCCAGCGGTTCCTGCGGGTTGGCCTGGCCGTGCCGATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
ENST00000575346.1
CDS CCA 72 bp CATACAGGTCGTACAGGAAGTCCAGCGGGTAACTGGTaGGCAGGCAGTCCGGCTGCTTCCAGGAAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: HTGRTGSPAGNW*AGSPAASRKAR
Trigger: CCTGGCCTTCCTGGAAGCAGCCGGACTGCCTGCCCACCAGTTACCCGCTGGACTTCCTGTACGACCTGTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CAA 72 bp CGCTCCTTGACAGAGCTATCCCACTCCACCGCCAGCTaGACATGTGGAGGGCCTCCTGGCCTCCTGAGATGC +
Preference number: 6 (lower is better)
Translates to: RSLTELSHSTAS*TCGGPPGLLRC
Trigger: GCATCTCAGGAGGCCAGGAGGCCCTCCACATGTCAAGCTGGCGGTGGAGTGGGATAGCTCTGTCAAGGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
CDS CAA 90 bp CCGAACAGGCGCTCCTTGACAGAGCTATCCCACTCCACCGCCAGCTaGACATGTGGAGGGCCTCCTGGCCTCCTGAGATGCAAAACCCTG +
Preference number: 6 (lower is better)
Translates to: PNRRSLTELSHSTAS*TCGGPPGLLRCKTL
Trigger: CAGGGTTTTGCATCTCAGGAGGCCAGGAGGCCCTCCACATGTCAAGCTGGCGGTGGAGTGGGATAGCTCTGTCAAGGAGCGCCTGTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
CDS CAA 90 bp AGGCAGCGTCCACAAACTCAGCTTCACCATCCCCTGCTGCAGGACTaGGCAGTGAGGACACTTCCAGGCGTCATCCTGGGCCAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: RQRPQTQLHHPLLQD*AVRTLPGVILGQLL
Trigger: GAGCAGCTGGCCCAGGATGACGCCTGGAAGTGTCCTCACTGCCAAGTCCTGCAGCAGGGGATGGTGAAGCTGAGTTTGTGGACGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
CDS TCA 72 bp GTTAGCAGGAAGGGCGACGTTGGACCTCGGCGATGCTaGCTTCTCATCCTCACCCGCAGTGCCCGTCAACAG +
Preference number: 6 (lower is better)
Translates to: VSRKGDVGPRRC*LLILTRSARQQ
Trigger: CTGTTGACGGGCACTGCGGGTGAGGATGAGAAGTCAGCATCGCCGAGGTCCAACGTCGCCCTTCCTGCTAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS TCA 72 bp GCCATAAGAAGCCTGCTCCCCTGGAACAGTCCTTTGTaGCATGCCCAGTGCACTGCCTCTCGGGGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: AIRSLLPWNSPL*HAQCTASRGPA
Trigger: AGCAGGGCCCCGAGAGGCAGTGCACTGGGCATGTCACAAAGGACTGTTCCAGGGGAGCAGGCTTCTTATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS GCA 72 bp ACCTCGGCGATGCTGACTTCTCATCCTCACCCGCAGTaGCCGTCAACAGCGACACAATGGACTGGCTCGTGG +
Preference number: 6 (lower is better)
Translates to: TSAMLTSHPHPQ*PSTATQWTGSW
Trigger: CCACGAGCCAGTCCATTGTGTCGCTGTTGACGGGCACTGCGGGTGAGGATGAGAAGTCAGCATCGCCGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS GCA 72 bp TTCCGAAACACGGACCTCAGAAGGGTGAGTGTCCCCTaGAGGGGTCTGTCTAGCTCAGAGGTGCCTCGGCGA +
Preference number: 6 (lower is better)
Translates to: FRNTDLRRVSVP*RGLSSSEVPRR
Trigger: TCGCCGAGGCACCTCTGAGCTAGACAGACCCCTGCAGGGGACACTCACCCTTCTGAGGTCCGTGTTTCGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 72 bp CCACTCCACCGCCAGCTTGACATGTGGAGGGCCTCCTaGCCTCCTGAGATGCAAAACCCTGTCAACTGCCCA +
Preference number: 6 (lower is better)
Translates to: PLHRQLDMWRAS*PPEMQNPVNCP
Trigger: TGGGCAGTTGACAGGGTTTTGCATCTCAGGAGGCCAGGAGGCCCTCCACATGTCAAGCTGGCGGTGGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
CDS CAA 72 bp CGCCCACCATCTTCGCTGTTAGCAGGAAGGGCGACGTaGGACCTCGGCGATGCTGACTTCTCATCCTCACCC +
Preference number: 6 (lower is better)
Translates to: RPPSSLLAGRAT*DLGDADFSSSP
Trigger: GGGTGAGGATGAGAAGTCAGCATCGCCGAGGTCCAACGTCGCCCTTCCTGCTAACAGCGAAGATGGTGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CAA 90 bp AGGCAGCGTCCACAAACTCAGCTTCACCATCCCCTGCTGCAGGACTaGGCAGTGAGGACACTTCCAGGCGTCATCCTGGGCCAGCTGGAA +
Preference number: 6 (lower is better)
Translates to: RQRPQTQLHHPLLQD*AVRTLPGVILGQLE
Trigger: TTCCAGCTGGCCCAGGATGACGCCTGGAAGTGTCCTCACTGCCAAGTCCTGCAGCAGGGGATGGTGAAGCTGAGTTTGTGGACGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573955.1
CDS TCA 72 bp TTCAGGCGGAAGCTTCTCCGACACCGGCCCTCGGGATaGACCCTCCAGGTCCTCATGTACACGATCCAGCAA +
Preference number: 6 (lower is better)
Translates to: FRRKLLRHRPSG*TLQVLMYTIQQ
Trigger: TTGCTGGATCGTGTACATGAGGACCTGGAGGGTTCATCCCGAGGGCCGGTGTCGGAGAAGCTTCCGCCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
CDS TCA 72 bp CCTTGGATCCAAAGGACCACCGCAGAGGCATGGTCTTaGATGGTCCCTGCTTGGCTCGGGAAGTGGTGGGTG +
Preference number: 6 (lower is better)
Translates to: PWIQRTTAEAWS*MVPAWLGKWWV
Trigger: CACCCACCACTTCCCGAGCCAAGCAGGGACCATTCAAGACCATGCCTCTGCGGTGGTCCTTTGGATCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 72 bp GACAGAGCTATCCCACTCCACCGCCAGCTTGACATGTaGAGGGCCTCCTGGCCTCCTGAGATGCAAAACCCT +
Preference number: 6 (lower is better)
Translates to: DRAIPLHRQLDM*RASWPPEMQNP
Trigger: AGGGTTTTGCATCTCAGGAGGCCAGGAGGCCCTCCACATGTCAAGCTGGCGGTGGAGTGGGATAGCTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
CDS CCA 72 bp AGTCCTGCCTCAGGGCTGGTGCTTCTCTGGGCCACATaGGGAGCCATGTTGAGTCCAGAGAGCGGAAACTTC +
Preference number: 6 (lower is better)
Translates to: SPASGLVLLWAT*GAMLSPESGNF
Trigger: GAAGTTTCCGCTCTCTGGACTCAACATGGCTCCCCATGTGGCCCAGAGAAGCACCAGCCCTGAGGCAGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 72 bp GGATCCAAAGGACCACCGCAGAGGCATGGTCTTGAATaGTCCCTGCTTGGCTCGGGAAGTGGTGGGTGCCTT +
Preference number: 6 (lower is better)
Translates to: GSKGPPQRHGLE*SLLGSGSGGCL
Trigger: AAGGCACCCACCACTTCCCGAGCCAAGCAGGGACCATTCAAGACCATGCCTCTGCGGTGGTCCTTTGGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 72 bp TCACCCGCAGTGCCCGTCAACAGCGACACAATGGACTaGCTCGTGGACCGAGGTCTTCGTCTGGATTCCAAG +
Preference number: 6 (lower is better)
Translates to: SPAVPVNSDTMD*LVDRGLRLDSK
Trigger: CTTGGAATCCAGACGAAGACCTCGGTCCACGAGCCAGTCCATTGTGTCGCTGTTGACGGGCACTGCGGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 72 bp CATCCTCACCCGCAGTGCCCGTCAACAGCGACACAATaGACTGGCTCGTGGACCGAGGTCTTCGTCTGGATT +
Preference number: 6 (lower is better)
Translates to: HPHPQCPSTATQ*TGSWTEVFVWI
Trigger: AATCCAGACGAAGACCTCGGTCCACGAGCCAGTCCATTGTGTCGCTGTTGACGGGCACTGCGGGTGAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CAA 90 bp GCCTGCTGCCCTGACCCCACCAAGTTACAGAAGAGGATTAGCACCTaGCTCTCACTGTGGAGAGAGAGGGAGAATCGCTGGCCCTCACGG +
Preference number: 6 (lower is better)
Translates to: ACCPDPTKLQKRIST*LSLWRERENRWPSR
Trigger: CCGTGAGGGCCAGCGATTCTCCCTCTCTCTCCACAGTGAGAGCAAGGTGCTAATCCTCTTCTGTAACTTGGTGGGGTCAGGGCAGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
ENST00000575346.1
CDS CAA 90 bp CCTGCCTCAGGGCTGGTGCTTCTCTGGGCCACATGGGGAGCCATGTaGAGTCCAGAGAGCGGAAACTTCACCAGCGTGGAGAGCTTGTTT +
Preference number: 6 (lower is better)
Translates to: PASGLVLLWATWGAM*SPESGNFTSVESLF
Trigger: AAACAAGCTCTCCACGCTGGTGAAGTTTCCGCTCTCTGGACTCAACATGGCTCCCCATGTGGCCCAGAGAAGCACCAGCCCTGAGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CAA 90 bp GGTGGTTTCTCCTTGGATCCAAAGGACCACCGCAGAGGCATGGTCTaGAATGGTCCCTGCTTGGCTCGGGAAGTGGTGGGTGCCTTCATG +
Preference number: 6 (lower is better)
Translates to: GGFSLDPKDHRRGMV*NGPCLAREVVGAFM
Trigger: CATGAAGGCACCCACCACTTCCCGAGCCAAGCAGGGACCATTCAAGACCATGCCTCTGCGGTGGTCCTTTGGATCCAAGGAGAAACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS GCA 72 bp GACAGAGGGGCCGACTGTCCTTCGGAGACAAATAGCTaGAGGCCACAGAGAGTCCCACAACACGGATGGAGA +
Preference number: 6 (lower is better)
Translates to: DRGADCPSETNS*RPQRVPQHGWR
Trigger: TCTCCATCCGTGTTGTGGGACTCTCTGTGGCCTGCAGCTATTTGTCTCCGAAGGACAGTCGGCCCCTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
CDS GCA 72 bp AAGGACCACCGCAGAGGCATGGTCTTGAATGGTCCCTaGTTGGCTCGGGAAGTGGTGGGTGCCTTCATGCTA +
Preference number: 6 (lower is better)
Translates to: KDHRRGMVLNGP*LAREVVGAFML
Trigger: TAGCATGAAGGCACCCACCACTTCCCGAGCCAAGCAGGGACCATTCAAGACCATGCCTCTGCGGTGGTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CAA 72 bp GACCACCGCAGAGGCATGGTCTTGAATGGTCCCTGCTaGGCTCGGGAAGTGGTGGGTGCCTTCATGCTAATG +
Preference number: 6 (lower is better)
Translates to: DHRRGMVLNGPC*AREVVGAFMLM
Trigger: CATTAGCATGAAGGCACCCACCACTTCCCGAGCCAAGCAGGGACCATTCAAGACCATGCCTCTGCGGTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CAA 72 bp TCCTTGGATCCAAAGGACCACCGCAGAGGCATGGTCTaGAATGGTCCCTGCTTGGCTCGGGAAGTGGTGGGT +
Preference number: 6 (lower is better)
Translates to: SLDPKDHRRGMV*NGPCLAREVVG
Trigger: ACCCACCACTTCCCGAGCCAAGCAGGGACCATTCAAGACCATGCCTCTGCGGTGGTCCTTTGGATCCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CAA 72 bp TCCACCAACTCGACGGAGGCACCTGGTGGTTTCTCCTaGGATCCAAAGGACCACCGCAGAGGCATGGTCTTG +
Preference number: 6 (lower is better)
Translates to: STNSTEAPGGFS*DPKDHRRGMVL
Trigger: CAAGACCATGCCTCTGCGGTGGTCCTTTGGATCCAAGGAGAAACCACCAGGTGCCTCCGTCGAGTTGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CAA 90 bp GATCCAAAGGACCACCGCAGAGGCATGGTCTTGAATGGTCCCTGCTaGGCTCGGGAAGTGGTGGGTGCCTTCATGCTAATGCTTCTGCCT +
Preference number: 6 (lower is better)
Translates to: DPKDHRRGMVLNGPC*AREVVGAFMLMLLP
Trigger: AGGCAGAAGCATTAGCATGAAGGCACCCACCACTTCCCGAGCCAAGCAGGGACCATTCAAGACCATGCCTCTGCGGTGGTCCTTTGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CAA 90 bp TCCAAGTACTCCACCAACTCGACGGAGGCACCTGGTGGTTTCTCCTaGGATCCAAAGGACCACCGCAGAGGCATGGTCTTGAATGGTCCC +
Preference number: 6 (lower is better)
Translates to: SKYSTNSTEAPGGFS*DPKDHRRGMVLNGP
Trigger: GGGACCATTCAAGACCATGCCTCTGCGGTGGTCCTTTGGATCCAAGGAGAAACCACCAGGTGCCTCCGTCGAGTTGGTGGAGTACTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS TCA 72 bp GTCAAGGAAGATCTTCTCCGACACCGGCCCTCGGGATaGACCCTCCAGGTCCTCATGTACACGATCCAGCAA +
Preference number: 6 (lower is better)
Translates to: VKEDLLRHRPSG*TLQVLMYTIQQ
Trigger: TTGCTGGATCGTGTACATGAGGACCTGGAGGGTTCATCCCGAGGGCCGGTGTCGGAGAAGATCTTCCTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574408.5
CDS CCA 72 bp TACTTGGAAACTGCATTCTTGAACTCCGCGGAAAGTTaGGGCGTGTATTCGCGAGTCCAGAGCGCGCGCACC +
Preference number: 6 (lower is better)
Translates to: YLETAFLNSAES*GVYSRVQSART
Trigger: GGTGCGCGCGCTCTGGACTCGCGAATACACGCCCCAACTTTCCGCGGAGTTCAAGAATGCAGTTTCCAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000570475.5
CDS CCA 72 bp CCCAGGTTCTGTACAGGGGCCTCACTCTTCATAAGATaGCGGACCTTGCTGAGGATAGACTGCTGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: PRFCTGASLFIR*RTLLRIDCWSW
Trigger: CCAGCTCCAGCAGTCTATCCTCAGCAAGGTCCGCCATCTTATGAAGAGTGAGGCCCCTGTACAGAACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
CDS CCA 72 bp TTCCAAGTACTCCACCAACTCGACGGAGGCACCTGGTaGTTTCTCCTTGGATCCAAAGGACCACCGCAGAGG +
Preference number: 6 (lower is better)
Translates to: FQVLHQLDGGTW*FLLGSKGPPQR
Trigger: CCTCTGCGGTGGTCCTTTGGATCCAAGGAGAAACCACCAGGTGCCTCCGTCGAGTTGGTGGAGTACTTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 72 bp GGATTCCAAGTACTCCACCAACTCGACGGAGGCACCTaGTGGTTTCTCCTTGGATCCAAAGGACCACCGCAG +
Preference number: 6 (lower is better)
Translates to: GFQVLHQLDGGT*WFLLGSKGPPQ
Trigger: CTGCGGTGGTCCTTTGGATCCAAGGAGAAACCACCAGGTGCCTCCGTCGAGTTGGTGGAGTACTTGGAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 72 bp ACACAATGGACTGGCTCGTGGACCGAGGTCTTCGTCTaGATTCCAAGTACTCCACCAACTCGACGGAGGCAC +
Preference number: 6 (lower is better)
Translates to: TQWTGSWTEVFV*IPSTPPTRRRH
Trigger: GTGCCTCCGTCGAGTTGGTGGAGTACTTGGAATCCAGACGAAGACCTCGGTCCACGAGCCAGTCCATTGTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 72 bp CAGTGCCCGTCAACAGCGACACAATGGACTGGCTCGTaGACCGAGGTCTTCGTCTGGATTCCAAGTACTCCA +
Preference number: 6 (lower is better)
Translates to: QCPSTATQWTGS*TEVFVWIPSTP
Trigger: TGGAGTACTTGGAATCCAGACGAAGACCTCGGTCCACGAGCCAGTCCATTGTGTCGCTGTTGACGGGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CAA 72 bp GTACTTGGAAACTGCATTCTTGAACTCCGCGGAAAGTaGGGGCGTGTATTCGCGAGTCCAGAGCGCGCGCAC +
Preference number: 6 (lower is better)
Translates to: VLGNCILELRGK*GRVFASPERAH
Trigger: GTGCGCGCGCTCTGGACTCGCGAATACACGCCCCAACTTTCCGCGGAGTTCAAGAATGCAGTTTCCAAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000570475.5
CDS CAA 72 bp CAGAGAGTTCCGGCAGTAGGCTGTGTAATGCCCACCTaGCAGGTTGCCATGGTGGTTGCAGACGGCATACAG +
Preference number: 6 (lower is better)
Translates to: QRVPAVGCVMPT*QVAMVVADGIQ
Trigger: CTGTATGCCGTCTGCAACCACCATGGCAACCTGCAAGGTGGGCATTACACAGCCTACTGCCGGAACTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285199.12
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS TCA 72 bp ACCCGGGACCTGAACTGGGAGCCACGTGTTGCCCTGTaGAAAAAGCCCCCGAGTGGTTGTGGTTTGCTTTTT +
Preference number: 6 (lower is better)
Translates to: TRDLNWEPRVAL*KKPPSGCGLLF
Trigger: AAAAAGCAAACCACAACCACTCGGGGGCTTTTTTCACAGGGCAACACGTGGCTCCCAGTTCAGGTCCCGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570827.6
CDS GCA 72 bp GTCTGTCTAGCTCAGAGGTGCCTCGGCGACTGTCTTTaGTGTTTCCAGAGAATCCCATATAGGGGGAGGGTG +
Preference number: 6 (lower is better)
Translates to: VCLAQRCLGDCL*CFQRIPYRGRV
Trigger: CACCCTCCCCCTATATGGGATTCTCTGGAAACAGCAAAGACAGTCGCCGAGGCACCTCTGAGCTAGACAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 72 bp GTACTTGGAAACTGCATTCTCGTAAACCGACAGACCTaGGTTTCGCCGCTGCTCCTGTTCCTCGAGCAGCCT +
Preference number: 6 (lower is better)
Translates to: VLGNCILVNRQT*VSPLLLFLEQP
Trigger: AGGCTGCTCGAGGAACAGGAGCAGCGGCGAAACCCAGGTCTGTCGGTTTACGAGAATGCAGTTTCCAAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570827.6
CDS CAA 90 bp CAGCAACCAGAGCAGGAATTCCAGGGCGTCGTGCTGGGAATTGCCTaGGAACTGAGAGCCGTACTTGGAAACTGCATTCTTGAACTCCGC +
Preference number: 6 (lower is better)
Translates to: QQPEQEFQGVVLGIA*ELRAVLGNCILELR
Trigger: GCGGAGTTCAAGAATGCAGTTTCCAAGTACGGCTCTCAGTTCCAAGGCAATTCCCAGCACGACGCCCTGGAATTCCTGCTCTGGTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000570475.5
CDS CAA 90 bp GCCATGTTGAGTCCAGAGAGCGGAAACTTCACCAGCGTGGAGAGCTaGTTTCTTCTCTCGCCCACCTGGCAGAACCTTTTGAGGTGGATG +
Preference number: 6 (lower is better)
Translates to: AMLSPESGNFTSVES*FLLSPTWQNLLRWM
Trigger: CATCCACCTCAAAAGGTTCTGCCAGGTGGGCGAGAGAAGAAACAAGCTCTCCACGCTGGTGAAGTTTCCGCTCTCTGGACTCAACATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS TCA 72 bp GCTGAGAGAGTCCCCTGGCTGGGTGAGGGAGGAACTTaGAAGGCATACACATTATCTCCCTCTGCGATGGTA +
Preference number: 6 (lower is better)
Translates to: AERVPWLGEGGT*KAYTLSPSAMV
Trigger: TACCATCGCAGAGGGAGATAATGTGTATGCCTTTCAAGTTCCTCCCTCACCCAGCCAGGGGACTCTCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
ENST00000575346.1
CDS GCA 72 bp ACCAGAGCAGGAATTCCAGGGCGTCGTGCTGGGAATTaGCTTGGAACTGAGAGCCGTACTTGGAAACTGCAT +
Preference number: 6 (lower is better)
Translates to: TRAGIPGRRAGN*LGTESRTWKLH
Trigger: ATGCAGTTTCCAAGTACGGCTCTCAGTTCCAAGGCAATTCCCAGCACGACGCCCTGGAATTCCTGCTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
CDS GCA 72 bp CTGACCCCACCAAGTTACAGAAGAGGATTAGCACCTTaGTCTCACTGTGGAGAGAGAGGGAGAATCGCTGGC +
Preference number: 6 (lower is better)
Translates to: LTPPSYRRGLAP*SHCGERGRIAG
Trigger: GCCAGCGATTCTCCCTCTCTCTCCACAGTGAGAGCAAGGTGCTAATCCTCTTCTGTAACTTGGTGGGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
ENST00000575346.1
CDS CCA 72 bp AAGTTACAGAAGAGGATTAGCACCTTGCTCTCACTGTaGAGAGAGAGGGAGAATCGCTGGCCCTCACGGGCT +
Preference number: 6 (lower is better)
Translates to: KLQKRISTLLSL*RERENRWPSRA
Trigger: AGCCCGTGAGGGCCAGCGATTCTCCCTCTCTCTCCACAGTGAGAGCAAGGTGCTAATCCTCTTCTGTAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
ENST00000575346.1
CDS CAA 72 bp AGTCCAGAGAGCGGAAACTTCACCAGCGTGGAGAGCTaGTTTCTTCTCTCGCCCACCTGGCAGAACCTTTTG +
Preference number: 6 (lower is better)
Translates to: SPESGNFTSVES*FLLSPTWQNLL
Trigger: CAAAAGGTTCTGCCAGGTGGGCGAGAGAAGAAACAAGCTCTCCACGCTGGTGAAGTTTCCGCTCTCTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CAA 90 bp CAGCAACCAGAGCAGGAATTCCAGGGCGTCGTGCTGGGAATTGCCTaGGAACTGAGAGCCGTACTTGGAAACTGCATTCTCGTAAACCGA +
Preference number: 6 (lower is better)
Translates to: QQPEQEFQGVVLGIA*ELRAVLGNCILVNR
Trigger: TCGGTTTACGAGAATGCAGTTTCCAAGTACGGCTCTCAGTTCCAAGGCAATTCCCAGCACGACGCCCTGGAATTCCTGCTCTGGTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570827.6
CDS CCA 72 bp TTTCTTCTCTCGCCCACCTGGCAGAACCTTTTGAGGTaGATGATGAGGATGTCAGGCAGCGTCCACAAACTC +
Preference number: 6 (lower is better)
Translates to: FLLSPTWQNLLR*MMRMSGSVHKL
Trigger: GAGTTTGTGGACGCTGCCTGACATCCTCATCATCCACCTCAAAAGGTTCTGCCAGGTGGGCGAGAGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 72 bp ACCAGCGTGGAGAGCTTGTTTCTTCTCTCGCCCACCTaGCAGAACCTTTTGAGGTGGATGATGAGGATGTCA +
Preference number: 6 (lower is better)
Translates to: TSVESLFLLSPT*QNLLRWMMRMS
Trigger: TGACATCCTCATCATCCACCTCAAAAGGTTCTGCCAGGTGGGCGAGAGAAGAAACAAGCTCTCCACGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 72 bp CGTGCTGGGAATTGCCTTGGAACTGAGAGCCGTACTTaGAAACTGCATTCTCGTAAACCGACAGACCTGGGT +
Preference number: 6 (lower is better)
Translates to: RAGNCLGTESRT*KLHSRKPTDLG
Trigger: ACCCAGGTCTGTCGGTTTACGAGAATGCAGTTTCCAAGTACGGCTCTCAGTTCCAAGGCAATTCCCAGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570827.6
CDS CAA 90 bp CAGGCAGTGGGGACAAGTCAAGGAAGATCTTGGGCTTTCCATTCCTaGAACTTGCCAGGATTATTCCCACTTCTGGCCCTTTGCCTGTGC +
Preference number: 6 (lower is better)
Translates to: QAVGTSQGRSWAFHS*NLPGLFPLLALCLC
Trigger: GCACAGGCAAAGGGCCAGAAGTGGGAATAATCCTGGCAAGTTCAAGGAATGGAAAGCCCAAGATCTTCCTTGACTTGTCCCCACTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575346.1
CDS TCA 72 bp AATTCCAGGGCGTCGTGCTGGGAATTGCCTTGGAACTaGGAGCCGTACTTGGAAACTGCATTCTTGAACTCC +
Preference number: 6 (lower is better)
Translates to: NSRASCWELPWN*EPYLETAFLNS
Trigger: GGAGTTCAAGAATGCAGTTTCCAAGTACGGCTCTCAGTTCCAAGGCAATTCCCAGCACGACGCCCTGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285199.12
ENST00000570475.5
CDS GCA 72 bp CAGGTCAAACTTTCTGGGAAGCTTGATGTCCTGCCCTaGATTTTCCTTGAGTTTCCTTGCTGTGTTTGGACC +
Preference number: 6 (lower is better)
Translates to: QVKLSGKLDVLP*IFLEFPCCVWT
Trigger: GGTCCAAACACAGCAAGGAAACTCAAGGAAAATGCAGGGCAGGACATCAAGCTTCCCAGAAAGTTTGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS CCA 72 bp GGTCCTCTTCATCAAAGAAAGACCGCTGGAATCCACTaGGATACAGTTCAACCAAGATCACCTCATCTGCAG +
Preference number: 6 (lower is better)
Translates to: GPLHQRKTAGIH*DTVQPRSPHLQ
Trigger: CTGCAGATGAGGTGATCTTGGTTGAACTGTATCCCAGTGGATTCCAGCGGTCTTTCTTTGATGAAGAGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
ENST00000575346.1
CDS CAA 72 bp AGTCAAGGAAGATCTTGGGCTTTCCATTCCTTGAACTaGCCAGGATTATTCCCACTTCTGGCCCTTTGCCTG +
Preference number: 6 (lower is better)
Translates to: SQGRSWAFHSLN*PGLFPLLALCL
Trigger: CAGGCAAAGGGCCAGAAGTGGGAATAATCCTGGCAAGTTCAAGGAATGGAAAGCCCAAGATCTTCCTTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575346.1
CDS CAA 72 bp GGGACAAGTCAAGGAAGATCTTGGGCTTTCCATTCCTaGAACTTGCCAGGATTATTCCCACTTCTGGCCCTT +
Preference number: 6 (lower is better)
Translates to: GTSQGRSWAFHS*NLPGLFPLLAL
Trigger: AAGGGCCAGAAGTGGGAATAATCCTGGCAAGTTCAAGGAATGGAAAGCCCAAGATCTTCCTTGACTTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575346.1
CDS CCA 72 bp ATGGTATTCAGGTCCTCTTCATCAAAGAAAGACCGCTaGAATCCACTGGGATACAGTTCAACCAAGATCACC +
Preference number: 6 (lower is better)
Translates to: MVFRSSSSKKDR*NPLGYSSTKIT
Trigger: GGTGATCTTGGTTGAACTGTATCCCAGTGGATTCCAGCGGTCTTTCTTTGATGAAGAGGACCTGAATACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
ENST00000575346.1
CDS CCA 72 bp CAGCGTCACACAATACTGACACGCTCCATCAAAAGCTaGACTCCGGTAAGGTTTTCTTTCGACCTAAAGAAA +
Preference number: 6 (lower is better)
Translates to: QRHTILTRSIKS*TPVRFSFDLKK
Trigger: TTTCTTTAGGTCGAAAGAAAACCTTACCGGAGTCCAGCTTTTGATGGAGCGTGTCAGTATTGTGTGACGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000573955.1
ENST00000574408.5
CDS GCA 72 bp GGGAGGAACTTGAAAGGCATACACATTATCTCCCTCTaGGATGGTATTCAGGTCCTCTTCATCAAAGAAAGA +
Preference number: 6 (lower is better)
Translates to: GRNLKGIHIISL*DGIQVLFIKER
Trigger: TCTTTCTTTGATGAAGAGGACCTGAATACCATCGCAGAGGGAGATAATGTGTATGCCTTTCAAGTTCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
ENST00000575346.1
CDS CCA 72 bp GAACTTGAAAGGCATACACATTATCTCCCTCTGCGATaGTATTCAGGTCCTCTTCATCAAAGAAAGACCGCT +
Preference number: 6 (lower is better)
Translates to: ELERHTHYLPLR*YSGPLHQRKTA
Trigger: AGCGGTCTTTCTTTGATGAAGAGGACCTGAATACCATCGCAGAGGGAGATAATGTGTATGCCTTTCAAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285199.12
ENST00000570475.5
ENST00000570827.6
ENST00000574408.5
ENST00000575346.1