Pregenerated sensors for USP41 (Homo sapiens)
Ensembl gene IDs: ENSG00000161133Ensembl transcript IDs: ENST00000486536.6
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS CAA 90 bp | CCTGGAGAGGGGAGGGTTTGGACCACACATAGGCAGCCCCAGCTTTaGCAGTTCCCACTCAAGGGCTTGGCTGCTGGGTCACCTAGCTCT | + |
Preference number: 6 (lower is better) Translates to: PGEGRVWTTHRQPQL*QFPLKGLAAGSPSS Trigger: AGAGCTAGGTGACCCAGCAGCCAAGCCCTTGAGTGGGAACTGCAAAAGCTGGGGCTGCCTATGTGTGGTCCAAACCCTCCCCTCTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486536.6 |
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CDS GCA 72 bp | GGAGGGTTTGGACCACACATAGGCAGCCCCAGCTTTTaGAGTTCCCACTCAAGGGCTTGGCTGCTGGGTCAC | + |
Preference number: 6 (lower is better) Translates to: GGFGPHIGSPSF*SSHSRAWLLGH Trigger: GTGACCCAGCAGCCAAGCCCTTGAGTGGGAACTGCAAAAGCTGGGGCTGCCTATGTGTGGTCCAAACCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486536.6 |
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CDS CAA 72 bp | GGGAGGGTTTGGACCACACATAGGCAGCCCCAGCTTTaGCAGTTCCCACTCAAGGGCTTGGCTGCTGGGTCA | + |
Preference number: 6 (lower is better) Translates to: GRVWTTHRQPQL*QFPLKGLAAGS Trigger: TGACCCAGCAGCCAAGCCCTTGAGTGGGAACTGCAAAAGCTGGGGCTGCCTATGTGTGGTCCAAACCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486536.6 |