RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP40 (Homo sapiens)

Ensembl gene IDs: ENSG00000085982

Ensembl transcript IDs: ENST00000251722.10, ENST00000409945.1, ENST00000427112.6, ENST00000427947.7, ENST00000430158.5, ENST00000443711.2, ENST00000450940.5, ENST00000450966.5, ENST00000464956.1, ENST00000473191.1, ENST00000483519.5, ENST00000484528.1, ENST00000485943.1, ENST00000496298.5, ENST00000678225.1

Found 940 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCGGGTGCTGTGTGAGAGAGCCCAGCACCTACTGGCAGCTGGGTaGGCGACATCCAGAGCTGCACCAGCCCCCGTGGCTGCCACGTGT +
Preference number: 1 (lower is better)
Translates to: GRVLCERAQHLLAAG*ATSRAAPAPVAATC
Trigger: ACACGTGGCAGCCACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTCTCTCACACAGCACCCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 90 bp AGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTaGACGGCACTTCAGGGCACAACCCACACGCGTCTTTGGACTTGC +
Preference number: 1 (lower is better)
Translates to: RQRPHAQAGPAARAC*TALQGTTHTRLWTC
Trigger: GCAAGTCCAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 90 bp AGAAGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTaGTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTGGACT +
Preference number: 1 (lower is better)
Translates to: RRQRPHAQAGPAARA*WTALQGTTHTRLWT
Trigger: AGTCCAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCTTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 90 bp GGACACCTGGAACCTGGGCTATGCCAGGCCTGTCTGCCACAGCCCTaGCTGCCCCGCTTCCACACAGGAAGAGAGGCTGAGGCGCTGTGG +
Preference number: 1 (lower is better)
Translates to: GHLEPGLCQACLPQP*LPRFHTGREAEALW
Trigger: CCACAGCGCCTCAGCCTCTCTTCCTGTGTGGAAGCGGGGCAGGCAGGGCTGTGGCAGACAGGCCTGGCATAGCCCAGGTTCCAGGTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 90 bp GAGGCGCCAGGCAGCCAGTCCCCATGCCCAGGAAACCCACGTTTGTaGCATCAGCCGGAGAGTTCATCGGGAGTAGAGCCGTGCAGCGGC +
Preference number: 1 (lower is better)
Translates to: EAPGSQSPCPGNPRL*HQPESSSGVEPCSG
Trigger: GCCGCTGCACGGCTCTACTCCCGATGAACTCTCCGGCTGATGCCACAAACGTGGGTTTCCTGGGCATGGGGACTGGCTGCCTGGCGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR TCA 90 bp CAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTGGCTGGCCTaGCCCCACACACCTCCCACAGCGGAGCAACGGCATGCCGCTGCC +
Preference number: 1 (lower is better)
Translates to: QGERESSEHGGKWLA*PHTPPTAEQRHAAA
Trigger: GGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTGTGGGGTCAGGCCAGCCACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 90 bp CCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTGGCTaGCCTGACCCCACACACCTCCCACAGCGGAGCAACGGCATGCCG +
Preference number: 1 (lower is better)
Translates to: PVRANESHLNTEESG*PDPTHLPQRSNGMP
Trigger: CGGCATGCCGTTGCTCCGCTGTGGGAGGTGTGTGGGGTCAGGCCAGCCACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 90 bp AAAGCAGACCCCACTTCTGCCCGCTTCTGCTCAGCACCAGCGCGGTaGCGCAGTGGCCTGAGACACTGTGAGAAGCCGGTCAGGGCGAAC +
Preference number: 1 (lower is better)
Translates to: KADPTSARFCSAPAR*RSGLRHCEKPVRAN
Trigger: GTTCGCCCTGACCGGCTTCTCACAGTGTCTCAGGCCACTGCGCCACCGCGCTGGTGCTGAGCAGAAGCGGGCAGAAGTGGGGTCTGCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 90 bp CCCTGCCTGCCCCGCTTCCACACAGGAAGAGAGGCTGAGGCGCTGTaGACGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGAT +
Preference number: 1 (lower is better)
Translates to: PCLPRFHTGREAEAL*TAAAAVLGIQGPSD
Trigger: ATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCGTCCACAGCGCCTCAGCCTCTCTTCCTGTGTGGAAGCGGGGCAGGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR TCA 90 bp AGAGCTGCACCAGCCCCCGTGGCTGCCACGTGTTGCAGAGCTAAGTaGCTACATGCACTGGCCAGGCCTCAGAGGAGCCGTCCCTGTGCT +
Preference number: 1 (lower is better)
Translates to: RAAPAPVAATCCRAK*LHALARPQRSRPCA
Trigger: AGCACAGGGACGGCTCCTCTGAGGCCTGGCCAGTGCATGTAGTCACTTAGCTCTGCAACACGTGGCAGCCACGGGGGCTGGTGCAGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR TCA 90 bp CTTCTGCTCAGCACCAGCGCGGTGGCGCAGTGGCCTGAGACACTGTaGGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGA +
Preference number: 1 (lower is better)
Translates to: LLLSTSAVAQWPETL*EAGQGERESSEHGG
Trigger: TCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTGTCTCAGGCCACTGCGCCACCGCGCTGGTGCTGAGCAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 90 bp GGGGGAAATGAAGTCCTGAAAGCAGACCCCACTTCTGCCCGCTTCTaGTCAGCACCAGCGCGGTGGCGCAGTGGCCTGAGACACTGTGAG +
Preference number: 1 (lower is better)
Translates to: GGNEVLKADPTSARF*SAPARWRSGLRHCE
Trigger: CTCACAGTGTCTCAGGCCACTGCGCCACCGCGCTGGTGCTGAGCAGAAGCGGGCAGAAGTGGGGTCTGCTTTCAGGACTTCATTTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 90 bp GCGCCTGACTCCAGCGGTGTCCTTTCTGCCCTCACACTTCAGTGCTaGTTCCCATCAGTGACGGGGCTGACGAGAAACCGTGAGGCCCAG +
Preference number: 1 (lower is better)
Translates to: APDSSGVLSALTLQC*FPSVTGLTRNREAQ
Trigger: CTGGGCCTCACGGTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAGGACACCGCTGGAGTCAGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 90 bp GGAGCGCCTGACTCCAGCGGTGTCCTTTCTGCCCTCACACTTCAGTaGTGCTTCCCATCAGTGACGGGGCTGACGAGAAACCGTGAGGCC +
Preference number: 1 (lower is better)
Translates to: GAPDSSGVLSALTLQ*CFPSVTGLTRNREA
Trigger: GGCCTCACGGTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAGGACACCGCTGGAGTCAGGCGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 90 bp TACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACCAGCCCCCGTaGCTGCCACGTGTTGCAGAGCTAAGTGACTACATGCACTGGCCA +
Preference number: 1 (lower is better)
Translates to: YWQLGGRHPELHQPP*LPRVAELSDYMHWP
Trigger: TGGCCAGTGCATGTAGTCACTTAGCTCTGCAACACGTGGCAGCCACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 90 bp CTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGGATAAGCTaGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTT +
Preference number: 1 (lower is better)
Translates to: LGIQGPSDHRAPRIS*TLGLRADVQRLPLL
Trigger: AAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTATCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 90 bp CGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTaGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAA +
Preference number: 1 (lower is better)
Translates to: RACWTALQGTTHTRL*TCRHSARLLASRRQ
Trigger: TTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 90 bp CCCCCGTGGCTGCCACGTGTTGCAGAGCTAAGTGACTACATGCACTaGCCAGGCCTCAGAGGAGCCGTCCCTGTGCTCAAAGGAAGCAGA +
Preference number: 1 (lower is better)
Translates to: PPWLPRVAELSDYMH*PGLRGAVPVLKGSR
Trigger: TCTGCTTCCTTTGAGCACAGGGACGGCTCCTCTGAGGCCTGGCCAGTGCATGTAGTCACTTAGCTCTGCAACACGTGGCAGCCACGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 90 bp GAAGCAGAGGATTTGGGATTGGAGGCGCCAGGCAGCCAGTCCCCATaGCCAGGAAACCCACGTTTGTGGCATCAGCCGGAGAGTTCATCG +
Preference number: 1 (lower is better)
Translates to: EAEDLGLEAPGSQSP*PGNPRLWHQPESSS
Trigger: CGATGAACTCTCCGGCTGATGCCACAAACGTGGGTTTCCTGGGCATGGGGACTGGCTGCCTGGCGCCTCCAATCCCAAATCCTCTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 90 bp TCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGGAGTaGGAGGCAGCTGCTAGTCAGAGTTGGGTCCTTAGGGCGCAGTGC +
Preference number: 1 (lower is better)
Translates to: STPSASLLSGVSVWE*EAAASQSWVLRAQC
Trigger: GCACTGCGCCCTAAGGACCCAACTCTGACTAGCAGCTGCCTCCCACTCCCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 90 bp ACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTaGGAGTGGGAGGCAGCTGCTAGTCAGAGTTGGGTCCTTAGGGCG +
Preference number: 1 (lower is better)
Translates to: TQSTPSASLLSGVSV*EWEAAASQSWVLRA
Trigger: CGCCCTAAGGACCCAACTCTGACTAGCAGCTGCCTCCCACTCCCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR TCA 90 bp ACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACCGTaGGGCCCAGGTGACAAGCAGGCTCAGGACATGCGACACCGTCTT +
Preference number: 1 (lower is better)
Translates to: TSVLLPISDGADEKP*GPGDKQAQDMRHRL
Trigger: AAGACGGTGTCGCATGTCCTGAGCCTGCTTGTCACCTGGGCCTCACGGTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 90 bp CTGACGAGAAACCGTGAGGCCCAGGTGACAAGCAGGCTCAGGACATaGGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCT +
Preference number: 1 (lower is better)
Translates to: LTRNREAQVTSRLRT*DTVFGMLLSAKLLS
Trigger: AGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGAGCCTGCTTGTCACCTGGGCCTCACGGTTTCTCGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 90 bp GAGTGGGAGGCAGCTGCTAGTCAGAGTTGGGTCCTTAGGGCGCAGTaGTTCACGGAAACGCACAGACGTCTATGGCAGACGCTCTCAGAC +
Preference number: 1 (lower is better)
Translates to: EWEAAASQSWVLRAQ*FTETHRRLWQTLSD
Trigger: GTCTGAGAGCGTCTGCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCTGACTAGCAGCTGCCTCCCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 90 bp CAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCTGGTAGGGGTTTaGACTGTTGGGAGGAGTATGAGGGACAAAGCAGGCCGCTGGCTC +
Preference number: 1 (lower is better)
Translates to: QTRVQKRRGFCLVGV*TVGRSMRDKAGRWL
Trigger: GAGCCAGCGGCCTGCTTTGTCCCTCATACTCCTCCCAACAGTCCAAACCCCTACCAGACAGAAGCCACGTCGCTTCTGCACACGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 90 bp TGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATaGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTG +
Preference number: 1 (lower is better)
Translates to: WVLRAQCFTETHRRL*QTLSDTCAEATWLL
Trigger: CAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR TCA 90 bp CATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTaGGCGGGGTTAGTGTTTGGGAGTGGGAGGCAGCTGCTAGTCAGA +
Preference number: 1 (lower is better)
Translates to: HLPLQRRSLHPVRVS*AGLVFGSGRQLLVR
Trigger: TCTGACTAGCAGCTGCCTCCCACTCCCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 90 bp TGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTGGACTTaGAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTTT +
Preference number: 1 (lower is better)
Translates to: CWTALQGTTHTRLWT*RHSARLLASRRQSF
Trigger: AAAGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 90 bp CAGAGCGACTCACCCTCGGAGGCCACCCTGTGTGGCTCCTCCTCGTaGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACTCAGACC +
Preference number: 1 (lower is better)
Translates to: QSDSPSEATLCGSSS*KELALFSIAVLTQT
Trigger: GGTCTGAGTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACACAGGGTGGCCTCCGAGGGTGAGTCGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 90 bp TGTGCAGAAGCGACGTGGCTTCTGTCTGGTAGGGGTTTGGACTGTTaGGAGGAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAG +
Preference number: 1 (lower is better)
Translates to: CAEATWLLSGRGLDC*EEYEGQSRPLAQHQ
Trigger: CTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTCCTCCCAACAGTCCAAACCCCTACCAGACAGAAGCCACGTCGCTTCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 90 bp AGCGGGGTTAGTGTTTGGGAGTGGGAGGCAGCTGCTAGTCAGAGTTaGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTA +
Preference number: 1 (lower is better)
Translates to: SGVSVWEWEAAASQS*VLRAQCFTETHRRL
Trigger: TAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCTGACTAGCAGCTGCCTCCCACTCCCAAACACTAACCCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 90 bp CTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTaGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAG +
Preference number: 1 (lower is better)
Translates to: LKKGWAPSSSRHLQL*RHQKPLSSPSAKTQ
Trigger: CTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTaGAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGT +
Preference number: 1 (lower is better)
Translates to: TLTALASSEASIISL*KDAVYTQCESPERG
Trigger: ACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 90 bp AGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTaGCTTCTGTCTGGTAGGGGTTTGGACTGTTGGGAGGAGTATGAG +
Preference number: 1 (lower is better)
Translates to: RRLWQTLSDTCAEAT*LLSGRGLDCWEEYE
Trigger: CTCATACTCCTCCCAACAGTCCAAACCCCTACCAGACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTaGTGTCTGGGAAAGTCAACCGTCTATGTCCCAAATCAATCAACT +
Preference number: 1 (lower is better)
Translates to: SGHATPSSGCCFPLS*CLGKSTVYVPNQST
Trigger: AGTTGATTGATTTGGGACATAGACGGTTGACTTTCCCAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 90 bp AATATGTCAGTTAAAGCCACAGAAACAGAACAGCTTAAGAAGGGCTaGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAG +
Preference number: 1 (lower is better)
Translates to: NMSVKATETEQLKKG*APSSSRHLQLWRHQ
Trigger: CTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGGCTTTAACTGACATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR TCA 90 bp CAGAACTCACTGATAGTGACTTCTGCCCATCGTGATGTGTGCGGCTaGGTGCTGAGTAAGACAACATGCTTGTACTTGTCTATGTTCCTT +
Preference number: 1 (lower is better)
Translates to: QNSLIVTSAHRDVCG*VLSKTTCLYLSMFL
Trigger: AAGGAACATAGACAAGTACAAGCATGTTGTCTTACTCAGCACTCAGCCGCACACATCACGATGGGCAGAAGTCACTATCAGTGAGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
3UTR TCA 90 bp TCGAAGGCAAAGCTTTTCAGCGATTTCATTAATATTTCATTACGCTaGGATGAGATGAAGGCAGATGCTACAGAAATATGTCAGTTAAAG +
Preference number: 1 (lower is better)
Translates to: SKAKLFSDFINISLR*DEMKADATEICQLK
Trigger: CTTTAACTGACATATTTCTGTAGCATCTGCCTTCATCTCATCTCAGCGTAATGAAATATTAATGAAATCGCTGAAAAGCTTTGCCTTCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCCCTTGGCCTGCGGGCTaGCGTGCAGCGGCTGCCCTT +
Preference number: 2 (lower is better)
Translates to: PHAQAGPAARACWTALQGPWPAG*RAAAAL
Trigger: AAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGG...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACTTCTGCCCGCTTCTaGTCAGCACCAGCGCGGTGG +
Preference number: 2 (lower is better)
Translates to: PHAQAGPAARACWTALQGTSARF*SAPARW
Trigger: CCACCGCGCTGGTGCTGAGCAGAAGCGGGCAGAAGT...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTGGCGACATCCAGAGCTaGACCAGCCCCCGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: PAARACWTALQGTTHTRLGDIQS*TSPRGC
Trigger: GCAGCCACGGGGGCTGGTGCAGCTCTGGATGTCGCC...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTGCAGCTGGGGCCGGGTaGTGTGTGAGAGAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: PAARACWTALQGTTHTRLAAGAG*CVREPS
Trigger: GCTGGGCTCTCTCACACAGCACCCGGCCCCAGCTGC...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp AAAGGGAAGAAGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCACAGGAAGAGAGGCTaGGGCGCTGTGGACGGCAGC +
Preference number: 2 (lower is better)
Translates to: KGKKAKATRTGRPGRTRLHRKRG*GAVDGS
Trigger: GCTGCCGTCCACAGCGCCTCAGCCTCTCTTCCTGTG...CAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCTTCTTCCCTTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTAGGCAGGGGAGCGCCTaGCTCCAGCGGTGTCCTTTC +
Preference number: 2 (lower is better)
Translates to: PAARACWTALQGTTHTRLRQGSA*LQRCPF
Trigger: GAAAGGACACCGCTGGAGTCAGGCGCTCCCCTGCCT...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCGAGGAGCCGTCCCTGTaGTCAAAGGAAGCAGAGGAT +
Preference number: 2 (lower is better)
Translates to: PHAQAGPAARACWTALQGEEPSL*SKEAED
Trigger: ATCCTCTGCTTCCTTTGAGCACAGGGACGGCTCCTC...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACGCACAGACGTCTATaGCAGACGCTCTCAGACACG +
Preference number: 2 (lower is better)
Translates to: PHAQAGPAARACWTALQGTHRRL*QTLSDT
Trigger: CGTGTCTGAGAGCGTCTGCCATAGACGTCTGTGCGT...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACCCACACGCGTCTTTaGACTTGCAGACATTCCGCG +
Preference number: 2 (lower is better)
Translates to: PHAQAGPAARACWTALQGTHTRL*TCRHSA
Trigger: CGCGGAATGTCTGCAAGTCCAAAGACGCGTGTGGGT...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCCGAACGAGAGTCATCTaGACACGGAGGAAAGTGGCT +
Preference number: 2 (lower is better)
Translates to: PHAQAGPAARACWTALQGRTRVI*TRRKVA
Trigger: AGCCACTTTCCTCCGTGTTCAGATGACTCTCGTTCG...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp AAAGGGAAGAAGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCCAGTGCGAGTCTCCTaGGCGGGGTTAGTGTTTGGG +
Preference number: 2 (lower is better)
Translates to: KGKKAKATRTGRPGRTRLPVRVS*AGLVFG
Trigger: CCCAAACACTAACCCCGCTCAGGAGACTCGCACTGG...CAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCTTCTTCCCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTGGAGGCCACCCTGTGTaGCTCCTCCTCGTGGAAAGA +
Preference number: 2 (lower is better)
Translates to: PAARACWTALQGTTHTRLGGHPV*LLLVER
Trigger: TCTTTCCACGAGGAGGAGCCACACAGGGTGGCCTCC...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CAA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTaGCTTAGCAGAGCGACTCACCCTCGGAGGCCACCCTGTGTGGCT +
Preference number: 2 (lower is better)
Translates to: ISWTLGLRADVQRLP*LSRATHPRRPPCVA
Trigger: AGCCACACAGGGTGGCCTCCGAGGGTGAGTCGCTCTGCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp CACACCTCCCACAGCGGAGCAACGGCATGCCGCTGCCTCCATACCTGCGGTTCAGGGCCGGGTGCTGTGTaGGAGAGCCCAGCACCTACT +
Preference number: 2 (lower is better)
Translates to: HTSHSGATACRCLHTCGSGPGAV*ESPAPT
Trigger: AGTAGGTGCTGGGCTCTCTCACACAGCACCCGGCCC...TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp TCAGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGGCAGCTGGGGCCGGGTaGTGTGTGAGAGAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: SDQRADVEHAGPERVGEMAAGAG*CVREPS
Trigger: GCTGGGCTCTCTCACACAGCACCCGGCCCCAGCTGC...CATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp GGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTGACGGAGGAAAGTGGCTaGCCTGACCCCACACACCTC +
Preference number: 2 (lower is better)
Translates to: GRTRLLDGTSGHNPHASLTEESG*PDPTHL
Trigger: GAGGTGTGTGGGGTCAGGCCAGCCACTTTCCTCCGT...CAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp CAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGGACCTTGGCCTGCGGGCTaGCGTGCAGCGGCTGCCCTT +
Preference number: 2 (lower is better)
Translates to: QQLQSSGSKDLLITEHPGPWPAG*RAAAAL
Trigger: AAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGG...TCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCAGCGGAGCAACGGCATaGCGCTGCCTCCATACCTGC +
Preference number: 2 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSSGATA*RCLHTC
Trigger: GCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCT...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTGTCCTTAGGGCGCAGTaGTTCACGGAAACGCACAGA +
Preference number: 2 (lower is better)
Translates to: PAARACWTALQGTTHTRLVLRAQ*FTETHR
Trigger: TCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGAC...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp GGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTGCAGAGGATTTGGGATTaGAGGCGCCAGGCAGCCAGT +
Preference number: 2 (lower is better)
Translates to: GRTRLLDGTSGHNPHASLQRIWD*RRQAAS
Trigger: ACTGGCTGCCTGGCGCCTCCAATCCCAAATCCTCTG...CAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CACACCTCCCACAGCGGAGCAACGGCATGCCGCTGCCTCCATACCTGCGGTTCAGCACCTACTGGCAGCTaGGTGGGCGACATCCAGAGC +
Preference number: 2 (lower is better)
Translates to: HTSHSGATACRCLHTCGSAPTGS*VGDIQS
Trigger: GCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGC...TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTACGCACAGACGTCTATaGCAGACGCTCTCAGACACG +
Preference number: 2 (lower is better)
Translates to: PAARACWTALQGTTHTRLTHRRL*QTLSDT
Trigger: CGTGTCTGAGAGCGTCTGCCATAGACGTCTGTGCGT...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp AAAGGGAAGAAGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGACCCACACGCGTCTTTaGACTTGCAGACATTCCGCG +
Preference number: 2 (lower is better)
Translates to: KGKKAKATRTGRPGRTRLTHTRL*TCRHSA
Trigger: CGCGGAATGTCTGCAAGTCCAAAGACGCGTGTGGGT...CAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCTTCTTCCCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CAA 90 bp TTGGAGGCGCCAGGCAGCCAGTCCCCATGCCCAGGAAACCCACGTTaGTGGCATCAGCCGGAGAGTTCATCGGGAGTAGAGCCGTGCAGC +
Preference number: 2 (lower is better)
Translates to: LEAPGSQSPCPGNPR*WHQPESSSGVEPCS
Trigger: GCTGCACGGCTCTACTCCCGATGAACTCTCCGGCTGATGCCACAAACGTGGGTTTCCTGGGCATGGGGACTGGCTGCCTGGCGCCTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAAGGGCCGGGTGCTGTGTaGGAGAGCCCAGCACCTACT +
Preference number: 2 (lower is better)
Translates to: RPKGRRGACGAGTSGGNEGPGAV*ESPAPT
Trigger: AGTAGGTGCTGGGCTCTCTCACACAGCACCCGGCCC...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCTGGCCTGAGACACTGTaGGAAGCCGGTCAGGGCGAA +
Preference number: 2 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSWPETL*EAGQGE
Trigger: TTCGCCCTGACCGGCTTCTCACAGTGTCTCAGGCCA...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACCCTTGGCCTGCGGGCTaGCGTGCAGCGGCTGCCCTT +
Preference number: 2 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNPWPAG*RAAAAL
Trigger: AAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGG...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTAGCGGAGCAACGGCATaGCGCTGCCTCCATACCTGC +
Preference number: 2 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPSGATA*RCLHTC
Trigger: GCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCT...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp TCAGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGACTTCTGCCCGCTTCTaGTCAGCACCAGCGCGGTGG +
Preference number: 2 (lower is better)
Translates to: SDQRADVEHAGPERVGEMTSARF*SAPARW
Trigger: CCACCGCGCTGGTGCTGAGCAGAAGCGGGCAGAAGT...CATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAGCTGGACCCTTGGCCTaGGGGCTGACGTGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRAGPLA*GLTCSG
Trigger: GCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGC...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp GGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTGACACCGTCTTCGGGATaGTGCTTTCCGCTAAGCTGC +
Preference number: 2 (lower is better)
Translates to: GRTRLLDGTSGHNPHASLTPSSG*CFPLSC
Trigger: GCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGT...CAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp GGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTGAGGAAGCAGAGGATTTaGGATTGGAGGCGCCAGGCA +
Preference number: 2 (lower is better)
Translates to: GRTRLLDGTSGHNPHASLRKQRI*DWRRQA
Trigger: TGCCTGGCGCCTCCAATCCCAAATCCTCTGCTTCCT...CAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTGAGCCCAGCACCTACTaGCAGCTGGGTGGGCGACAT +
Preference number: 2 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPEPSTY*QLGGRH
Trigger: ATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTC...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAATCAGCACCAGCGCGGTaGCGCAGTGGCCTGAGACAC +
Preference number: 2 (lower is better)
Translates to: RPKGRRGACGAGTSGGNESAPAR*RSGLRH
Trigger: GTGTCTCAGGCCACTGCGCCACCGCGCTGGTGCTGA...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCGGAGGCCACCCTGTGTaGCTCCTCCTCGTGGAAAGA +
Preference number: 2 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSGGHPV*LLLVER
Trigger: TCTTTCCACGAGGAGGAGCCACACAGGGTGGCCTCC...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CAA 90 bp ACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTaGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCA +
Preference number: 2 (lower is better)
Translates to: TRLLDGTSGHNPHAS*DLQTFREASGLSKA
Trigger: TGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp TGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCAGACGGGTGGCGCAGTGGCCTaGGACACTGTGAGAAGCCGG +
Preference number: 2 (lower is better)
Translates to: WVLRAQCFTETHRRLWQTGGAVA*DTVRSR
Trigger: CCGGCTTCTCACAGTGTCTCAGGCCACTGCGCCACC...CGTCTGCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp GGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCACAGGAAGAGAGGCTaGGGCGCTGTGGACGGCAGC +
Preference number: 2 (lower is better)
Translates to: GRPARHDTYSSGVIRSLYHRKRG*GAVDGS
Trigger: GCTGCCGTCCACAGCGCCTCAGCCTCTCTTCCTGTG...ATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTGGCGACATCCAGAGCTaGACCAGCCCCCGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTGDIQS*TSPRGC
Trigger: GCAGCCACGGGGGCTGGTGCAGCTCTGGATGTCGCC...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGACATCCAGAGCTaGACCAGCCCCCGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSGDIQS*TSPRGC
Trigger: GCAGCCACGGGGGCTGGTGCAGCTCTGGATGTCGCC...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAGCAGCTGGGGCCGGGTaGTGTGTGAGAGAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRAAGAG*CVREPS
Trigger: GCTGGGCTCTCTCACACAGCACCCGGCCCCAGCTGC...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGGCAGACGTGGAGCATaGGGGGCCGGAACGAGTGGG +
Preference number: 2 (lower is better)
Translates to: QTSMADALRHVCRSDVASGRRGA*GAGTSG
Trigger: CCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCC...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTGCTGGACCCTTGGCCTaGGGGCTGACGTGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: VFGLADIPRGFWPLEGKAAGPLA*GLTCSG
Trigger: GCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGC...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp GGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATTATGCCAGGCCTGTCTaGCACAGCCCTGCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: GRPARHDTYSSGVIRSLYYARPV*HSPACP
Trigger: GGGGCAGGCAGGGCTGTGGCAGACAGGCCTGGCATA...ATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGGACTGCACCAGCCCCCGTaGCTGCCACGTGTTGCAGAG +
Preference number: 2 (lower is better)
Translates to: QQLQSSGSKDLLITEHPGLHQPP*LPRVAE
Trigger: CTCTGCAACACGTGGCAGCCACGGGGGCTGGTGCAG...TCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTACTGGCAGCTGGGTaGGCGACATCCAGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPLLAAG*ATSRAA
Trigger: TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAG...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAAGAGCCCAGCACCTACTaGCAGCTGGGTGGGCGACAT +
Preference number: 2 (lower is better)
Translates to: RPKGRRGACGAGTSGGNEEPSTY*QLGGRH
Trigger: ATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTC...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGGATCAGCACCAGCGCGGTaGCGCAGTGGCCTGAGACAC +
Preference number: 2 (lower is better)
Translates to: QQLQSSGSKDLLITEHPGSAPAR*RSGLRH
Trigger: GTGTCTCAGGCCACTGCGCCACCGCGCTGGTGCTGA...TCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp TGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCAGACGGAGGCTGAGGCGCTGTaGACGGCAGCAGCTGCAGTC +
Preference number: 2 (lower is better)
Translates to: WVLRAQCFTETHRRLWQTEAEAL*TAAAAV
Trigger: GACTGCAGCTGCTGCCGTCCACAGCGCCTCAGCCTC...CGTCTGCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTCAGCATCAGCTTGTTaGAAAAGGGTCACAGGCAGG +
Preference number: 2 (lower is better)
Translates to: PAARACWTALQGTTHTRLSASAC*KRVTGR
Trigger: CCTGCCTGTGACCCTTTTCCAACAAGCTGATGCTGA...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGTGGCGCAGTGGCCTaGGACACTGTGAGAAGCCGG +
Preference number: 2 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSGGAVA*DTVRSR
Trigger: CCGGCTTCTCACAGTGTCTCAGGCCACTGCGCCACC...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAGGTGGCGCAGTGGCCTaGGACACTGTGAGAAGCCGG +
Preference number: 2 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRGGAVA*DTVRSR
Trigger: CCGGCTTCTCACAGTGTCTCAGGCCACTGCGCCACC...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCGCCTGCGGGCTGACGTaGAGCGGCTGCCCTTGCTTA +
Preference number: 2 (lower is better)
Translates to: TSMADALRHVCRSDVASVACGLT*SGCPCL
Trigger: TAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGC...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAGCCTGCGGGCTGACGTaGAGCGGCTGCCCTTGCTTA +
Preference number: 2 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRACGLT*SGCPCL
Trigger: TAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGC...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp GGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTGTGCTTTCCGCTAAGCTaGTGTCTGGGAAAGTCAACC +
Preference number: 2 (lower is better)
Translates to: GRTRLLDGTSGHNPHASLCFPLS*CLGKST
Trigger: GGTTGACTTTCCCAGACAGCAGCTTAGCGGAAAGCA...CAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGCTGCACCAGCCCCCGTaGCTGCCACGTGTTGCAGAG +
Preference number: 2 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWLHQPP*LPRVAE
Trigger: CTCTGCAACACGTGGCAGCCACGGGGGCTGGTGCAG...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAGAGGCTGAGGCGCTGTaGACGGCAGCAGCTGCAGTC +
Preference number: 2 (lower is better)
Translates to: LSALTLQCCFPSVTGLTREAEAL*TAAAAV
Trigger: GACTGCAGCTGCTGCCGTCCACAGCGCCTCAGCCTC...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTAGCGGGGTTAGTGTTTaGGAGTGGGAGGCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPSGVSV*EWEAAA
Trigger: AGCAGCTGCCTCCCACTCCCAAACACTAACCCCGCT...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp TGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCAGACGACCGTGAGGCCCAGGTaGCAAGCAGGCTCAGGACAT +
Preference number: 2 (lower is better)
Translates to: WVLRAQCFTETHRRLWQTTVRPR*QAGSGH
Trigger: ATGTCCTGAGCCTGCTTGTCACCTGGGCCTCACGGT...CGTCTGCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp AAAGGGAAGAAGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGTACGCTGAGATGAGATaGAGGCAGATGCTACAGAAA +
Preference number: 2 (lower is better)
Translates to: KGKKAKATRTGRPGRTRLYAEMR*RQMLQK
Trigger: TTTCTGTAGCATCTGCCTTCATCTCATCTCAGCGTA...CAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCTTCTTCCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCACTTCTGCCCGCTTCTaGTCAGCACCAGCGCGGTGG +
Preference number: 2 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLTSARF*SAPARW
Trigger: CCACCGCGCTGGTGCTGAGCAGAAGCGGGCAGAAGT...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTAGCTGGACCCTTGGCCTaGGGGCTGACGTGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLAGPLA*GLTCSG
Trigger: GCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGC...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACGTGGACGGCAGCAGCTaGAGTCCTCGGGATCCAAGG +
Preference number: 2 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNVDGSS*SPRDPR
Trigger: CCTTGGATCCCGAGGACTGCAGCTGCTGCCGTCCAC...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCGTGGACGGCAGCAGCTaGAGTCCTCGGGATCCAAGG +
Preference number: 2 (lower is better)
Translates to: TSMADALRHVCRSDVASVVDGSS*SPRDPR
Trigger: CCTTGGATCCCGAGGACTGCAGCTGCTGCCGTCCAC...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp AGAGTTGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCTGTCTGCCACAGCCCTaGCTGCCCCGCTTCCACACA +
Preference number: 2 (lower is better)
Translates to: RVGSLGRSASRKRTDVYGCLPQP*LPRFHT
Trigger: TGTGTGGAAGCGGGGCAGGCAGGGCTGTGGCAGACA...GCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTTGTCTGCCACAGCCCTaGCTGCCCCGCTTCCACACA +
Preference number: 2 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSCLPQP*LPRFHT
Trigger: TGTGTGGAAGCGGGGCAGGCAGGGCTGTGGCAGACA...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp GGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATGGAAACCGGTCAGGCTaGCCAGGACACCTGGAACCT +
Preference number: 2 (lower is better)
Translates to: GRPARHDTYSSGVIRSLYGNRSG*PGHLEP
Trigger: AGGTTCCAGGTGTCCTGGGCAGCCTGACCGGTTTCC...ATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp TCAGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAGGAAGCAGAGGATTTaGGATTGGAGGCGCCAGGCA +
Preference number: 2 (lower is better)
Translates to: SDQRADVEHAGPERVGEMRKQRI*DWRRQA
Trigger: TGCCTGGCGCCTCCAATCCCAAATCCTCTGCTTCCT...CATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAAGTGACTACATGCACTaGCCAGGCCTCAGAGGAGCC +
Preference number: 2 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPSDYMH*PGLRGA
Trigger: GGCTCCTCTGAGGCCTGGCCAGTGCATGTAGTCACT...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGGACTACTGGCAGCTGGGTaGGCGACATCCAGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: QQLQSSGSKDLLITEHPGLLAAG*ATSRAA
Trigger: TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAG...TCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGCACCTACTGGCAGCTaGGTGGGCGACATCCAGAGC +
Preference number: 2 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSAPTGS*VGDIQS
Trigger: GCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGC...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGAGCCCAGCACCTACTaGCAGCTGGGTGGGCGACAT +
Preference number: 2 (lower is better)
Translates to: QTSMADALRHVCRSDVASEPSTY*QLGGRH
Trigger: ATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTC...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp GGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATACGGAGGAAAGTGGCTaGCCTGACCCCACACACCTC +
Preference number: 2 (lower is better)
Translates to: GRPARHDTYSSGVIRSLYTEESG*PDPTHL
Trigger: GAGGTGTGTGGGGTCAGGCCAGCCACTTTCCTCCGT...ATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACACCAAAGGGCAGACGTaGAGCATGCGGGGCCGGAAC +
Preference number: 2 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNTKGQT*SMRGRN
Trigger: GTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGT...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTACCAAAGGGCAGACGTaGAGCATGCGGGGCCGGAAC +
Preference number: 2 (lower is better)
Translates to: QTSMADALRHVCRSDVASTKGQT*SMRGRN
Trigger: GTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGT...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAACCAAAGGGCAGACGTaGAGCATGCGGGGCCGGAAC +
Preference number: 2 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRTKGQT*SMRGRN
Trigger: GTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGT...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGCACCCAGGATAAGCTaGACCCTTGGCCTGCGGGCT +
Preference number: 2 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSAPRIS*TLGLRA
Trigger: AGCCCGCAGGCCAAGGGTCCAGCTTATCCTGGGTGC...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGCTGCCCAGGACACCTaGAACCTGGGCTATGCCAGG +
Preference number: 2 (lower is better)
Translates to: QTSMADALRHVCRSDVASAAQDT*NLGYAR
Trigger: CCTGGCATAGCCCAGGTTCCAGGTGTCCTGGGCAGC...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGTGGCCTGAGACACTGTaGGAAGCCGGTCAGGGCGAA +
Preference number: 2 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWWPETL*EAGQGE
Trigger: TTCGCCCTGACCGGCTTCTCACAGTGTCTCAGGCCA...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTACCGTGAGGCCCAGGTaGCAAGCAGGCTCAGGACAT +
Preference number: 2 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTTVRPR*QAGSGH
Trigger: ATGTCCTGAGCCTGCTTGTCACCTGGGCCTCACGGT...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCGCTGACGAGAAACCGTaGGGCCCAGGTGACAAGCAG +
Preference number: 2 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLADEKP*GPGDKQ
Trigger: CTGCTTGTCACCTGGGCCTCACGGTTTCTCGTCAGC...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp AGAGTTGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCGGCAGCCAGTCCCCATaGCCAGGAAACCCACGTTTG +
Preference number: 2 (lower is better)
Translates to: RVGSLGRSASRKRTDVYGGSQSP*PGNPRL
Trigger: CAAACGTGGGTTTCCTGGGCATGGGGACTGGCTGCC...GCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCAGCCAGTCCCCATaGCCAGGAAACCCACGTTTG +
Preference number: 2 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSGSQSP*PGNPRL
Trigger: CAAACGTGGGTTTCCTGGGCATGGGGACTGGCTGCC...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp GGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCGCTGCCTCCATACCTaGGGTTCACGCACACGTTGT +
Preference number: 2 (lower is better)
Translates to: GRPARHDTYSSGVIRSLYRCLHT*GSRTRC
Trigger: ACAACGTGTGCGTGAACCGCAGGTATGGAGGCAGCG...ATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACGCAACGGCATGCCGCTaGCTCCATACCTGCGGTTCA +
Preference number: 2 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNATACR*LHTCGS
Trigger: TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGC...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp TTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTGGAACCTGGCAACGGCATGCCGCTaGCTCCATACCTGCGGTTCA +
Preference number: 2 (lower is better)
Translates to: FIEATQETGQAAQDTWNLATACR*LHTCGS
Trigger: TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGC...CAGGTTCCAGGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGAGCGGAGCAACGGCATaGCGCTGCCTCCATACCTGC +
Preference number: 2 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGSGATA*RCLHTC
Trigger: GCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCT...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGTGCAGCGGCTGCCCTTaGTTAGCAGAGCGACTCACC +
Preference number: 2 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLCSGCP*LAERLT
Trigger: GGTGAGTCGCTCTGCTAAGCAAGGGCAGCCGCTGCA...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACTGCAGCGGCTGCCCTTaGTTAGCAGAGCGACTCACC +
Preference number: 2 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNCSGCP*LAERLT
Trigger: GGTGAGTCGCTCTGCTAAGCAAGGGCAGCCGCTGCA...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp TGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCAGACGAGTGACTACATGCACTaGCCAGGCCTCAGAGGAGCC +
Preference number: 2 (lower is better)
Translates to: WVLRAQCFTETHRRLWQTSDYMH*PGLRGA
Trigger: GGCTCCTCTGAGGCCTGGCCAGTGCATGTAGTCACT...CGTCTGCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCCTACTGGCAGCTGGGTaGGCGACATCCAGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLLLAAG*ATSRAA
Trigger: TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAG...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp TCAGGTGTTTTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCGCACCTACTGGCAGCTaGGTGGGCGACATCCAGAGC +
Preference number: 2 (lower is better)
Translates to: SGVFIEATQETGQAAQDTAPTGS*VGDIQS
Trigger: GCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGC...GGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCGGAGGCCACCCTGTGTaGCTCCTCCTCGTGGAAAGA +
Preference number: 2 (lower is better)
Translates to: TSMADALRHVCRSDVASVGGHPV*LLLVER
Trigger: TCTTTCCACGAGGAGGAGCCACACAGGGTGGCCTCC...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CAA 90 bp TCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCTGGTAGGGGTTaGGACTGTTGGGAGGAGTATGAGGGACAAAGCAGGCCGCTGGCT +
Preference number: 2 (lower is better)
Translates to: SDTCAEATWLLSGRG*DCWEEYEGQSRPLA
Trigger: AGCCAGCGGCCTGCTTTGTCCCTCATACTCCTCCCAACAGTCCAAACCCCTACCAGACAGAAGCCACGTCGCTTCTGCACACGTGTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCATGTTGCAGAGCTAAGTaGCTACATGCACTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPCCRAK*LHALAR
Trigger: CCTGGCCAGTGCATGTAGTCACTTAGCTCTGCAACA...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAATGTTGCAGAGCTAAGTaGCTACATGCACTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: RPKGRRGACGAGTSGGNECCRAK*LHALAR
Trigger: CCTGGCCAGTGCATGTAGTCACTTAGCTCTGCAACA...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAACGAACGAGAGTCATCTaGACACGGAGGAAAGTGGCT +
Preference number: 2 (lower is better)
Translates to: RPKGRRGACGAGTSGGNERTRVI*TRRKVA
Trigger: AGCCACTTTCCTCCGTGTTCAGATGACTCTCGTTCG...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp TCAGGTGTTTTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTGGCCTGAGACACTGTaGGAAGCCGGTCAGGGCGAA +
Preference number: 2 (lower is better)
Translates to: SGVFIEATQETGQAAQDTWPETL*EAGQGE
Trigger: TTCGCCCTGACCGGCTTCTCACAGTGTCTCAGGCCA...GGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGGCTGACGAGAAACCGTaGGGCCCAGGTGACAAGCAG +
Preference number: 2 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGADEKP*GPGDKQ
Trigger: CTGCTTGTCACCTGGGCCTCACGGTTTCTCGTCAGC...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTCTGTTGGGAGGAGTATaGGGGACAAAGCAGGCCGCT +
Preference number: 2 (lower is better)
Translates to: QTSMADALRHVCRSDVASLLGGV*GTKQAA
Trigger: AGCGGCCTGCTTTGTCCCTCATACTCCTCCCAACAG...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCCTGTTGGGAGGAGTATaGGGGACAAAGCAGGCCGCT +
Preference number: 2 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLLLGGV*GTKQAA
Trigger: AGCGGCCTGCTTTGTCCCTCATACTCCTCCCAACAG...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTCTGACGTGCAGCGGCTaGCCTTGCTTAGCAGAGCGA +
Preference number: 2 (lower is better)
Translates to: VFGLADIPRGFWPLEGKALTCSG*PCLAER
Trigger: TCGCTCTGCTAAGCAAGGGCAGCCGCTGCACGTCAG...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGGGAAACCGGTCAGGCTaGCCAGGACACCTGGAACCT +
Preference number: 2 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGGNRSG*PGHLEP
Trigger: AGGTTCCAGGTGTCCTGGGCAGCCTGACCGGTTTCC...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp TGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCAGACGAACGAGTGGGGGAAATaGAGTCCTGAAAGCAGACCC +
Preference number: 2 (lower is better)
Translates to: WVLRAQCFTETHRRLWQTNEWGK*SPESRP
Trigger: GGGTCTGCTTTCAGGACTTCATTTCCCCCACTCGTT...CGTCTGCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGGAGGAGCCGTCCCTGTaGTCAAAGGAAGCAGAGGAT +
Preference number: 2 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWEEPSL*SKEAED
Trigger: ATCCTCTGCTTCCTTTGAGCACAGGGACGGCTCCTC...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGAGGAGCCGTCCCTGTaGTCAAAGGAAGCAGAGGAT +
Preference number: 2 (lower is better)
Translates to: QTSMADALRHVCRSDVASEEPSL*SKEAED
Trigger: ATCCTCTGCTTCCTTTGAGCACAGGGACGGCTCCTC...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTTCACGCACACGTTGTaGATTTTCTGGTTAAAAGAA +
Preference number: 2 (lower is better)
Translates to: PAARACWTALQGTTHTRLFTHTL*IFWLKE
Trigger: TTCTTTTAACCAGAAAATGCACAACGTGTGCGTGAA...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp TCAGGTGTTTTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCCGCTGCCTCCATACCTaGGGTTCACGCACACGTTGT +
Preference number: 2 (lower is better)
Translates to: SGVFIEATQETGQAAQDTRCLHT*GSRTRC
Trigger: ACAACGTGTGCGTGAACCGCAGGTATGGAGGCAGCG...GGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTCGCTGCCTCCATACCTaGGGTTCACGCACACGTTGT +
Preference number: 2 (lower is better)
Translates to: HCEKPVRANESHLNTEESRCLHT*GSRTRC
Trigger: ACAACGTGTGCGTGAACCGCAGGTATGGAGGCAGCG...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTAGTGGACGGCAGCAGCTaGAGTCCTCGGGATCCAAGG +
Preference number: 2 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLVDGSS*SPRDPR
Trigger: CCTTGGATCCCGAGGACTGCAGCTGCTGCCGTCCAC...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTCCGTCTTCGGGATGCTaGTTTCCGCTAAGCTGCTGT +
Preference number: 2 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSPSSGC*FPLSCC
Trigger: ACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGG...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp AGAGTTGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCACACCGTCTTCGGGATaGTGCTTTCCGCTAAGCTGC +
Preference number: 2 (lower is better)
Translates to: RVGSLGRSASRKRTDVYGTPSSG*CFPLSC
Trigger: GCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGT...GCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGGCCCTCACACTTCAGTaGTGCTTCCCATCAGTGACG +
Preference number: 2 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWALTLQ*CFPSVT
Trigger: CGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGC...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGGCTCTCAGACACGTGTaGAGAAGCGACGTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWALRHV*RSDVAS
Trigger: AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGC...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGCTCTCAGACACGTGTaGAGAAGCGACGTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSALRHV*RSDVAS
Trigger: AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGC...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGGTCCTTAGGGCGCAGTaGTTCACGGAAACGCACAGA +
Preference number: 2 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWVLRAQ*FTETHR
Trigger: TCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGAC...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp GGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATGGAAACCCACGTTTGTaGCATCAGCCGGAGAGTTCA +
Preference number: 2 (lower is better)
Translates to: GRPARHDTYSSGVIRSLYGNPRL*HQPESS
Trigger: TGAACTCTCCGGCTGATGCCACAAACGTGGGTTTCC...ATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTAGTGACTACATGCACTaGCCAGGCCTCAGAGGAGCC +
Preference number: 2 (lower is better)
Translates to: HCEKPVRANESHLNTEESSDYMH*PGLRGA
Trigger: GGCTCCTCTGAGGCCTGGCCAGTGCATGTAGTCACT...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACTCAGCACCAGCGCGGTaGCGCAGTGGCCTGAGACAC +
Preference number: 2 (lower is better)
Translates to: TLTALASSEASIISLCKDSAPAR*RSGLRH
Trigger: GTGTCTCAGGCCACTGCGCCACCGCGCTGGTGCTGA...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGAGGACACCTGGAACCTaGGCTATGCCAGGCCTGTCT +
Preference number: 2 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGRTPGT*AMPGLS
Trigger: AGACAGGCCTGGCATAGCCCAGGTTCCAGGTGTCCT...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGTGTTGCAGAGCTAAGTaGCTACATGCACTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLCCRAK*LHALAR
Trigger: CCTGGCCAGTGCATGTAGTCACTTAGCTCTGCAACA...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACCGAACGAGAGTCATCTaGACACGGAGGAAAGTGGCT +
Preference number: 2 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNRTRVI*TRRKVA
Trigger: AGCCACTTTCCTCCGTGTTCAGATGACTCTCGTTCG...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACGGGGAAATGAAGTCCTaGAAGCAGACCCCACTTCTG +
Preference number: 2 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNGEMKS*KQTPLL
Trigger: CAGAAGTGGGGTCTGCTTTCAGGACTTCATTTCCCC...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTAACGAGTGGGGGAAATaGAGTCCTGAAAGCAGACCC +
Preference number: 2 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTNEWGK*SPESRP
Trigger: GGGTCTGCTTTCAGGACTTCATTTCCCCCACTCGTT...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp TTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTGGAACCTGGATCCAAGGACCTTCTaGTCACAGAGCACCCAGGAT +
Preference number: 2 (lower is better)
Translates to: FIEATQETGQAAQDTWNLDPRTF*SQSTQD
Trigger: ATCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATC...CAGGTTCCAGGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAGATCCAAGGACCTTCTaGTCACAGAGCACCCAGGAT +
Preference number: 2 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRDPRTF*SQSTQD
Trigger: ATCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATC...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACCAGTGCGAGTCTCCTaGGCGGGGTTAGTGTTTGGG +
Preference number: 2 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLPVRVS*AGLVFG
Trigger: CCCAAACACTAACCCCGCTCAGGAGACTCGCACTGG...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp TGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCAGACGTGCTTTCCGCTAAGCTaGTGTCTGGGAAAGTCAACC +
Preference number: 2 (lower is better)
Translates to: WVLRAQCFTETHRRLWQTCFPLS*CLGKST
Trigger: GGTTGACTTTCCCAGACAGCAGCTTAGCGGAAAGCA...CGTCTGCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGCTCACACTTCAGTGCTaGTTCCCATCAGTGACGGGG +
Preference number: 2 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGLTLQC*FPSVTG
Trigger: CCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAG...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACGGAAACCCACGTTTGTaGCATCAGCCGGAGAGTTCA +
Preference number: 2 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNGNPRL*HQPESS
Trigger: TGAACTCTCCGGCTGATGCCACAAACGTGGGTTTCC...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACACGGAGGAAAGTGGCTaGCCTGACCCCACACACCTC +
Preference number: 2 (lower is better)
Translates to: VWLLLVERARTFQHRSFNTEESG*PDPTHL
Trigger: GAGGTGTGTGGGGTCAGGCCAGCCACTTTCCTCCGT...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCTGTGGCTCCTCCTCGTaGAAAGAGCTCGCACTTTTC +
Preference number: 2 (lower is better)
Translates to: TSMADALRHVCRSDVASVCGSSS*KELALF
Trigger: GAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACA...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp GGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTGAATAGAAATCTGGGTTaGATTAAGTGGGAAAACCCT +
Preference number: 2 (lower is better)
Translates to: GRTRLLDGTSGHNPHASLNRNLG*IKWENP
Trigger: AGGGTTTTCCCACTTAATCCAACCCAGATTTCTATT...CAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp GGGAAAGTATTTGGCAATTTCAATCTTCTCCACGGGAAGACGATAGAAATCGGCCCGGCAGTCCCACCCTaGGCCGCGTTCCACACCAGG +
Preference number: 2 (lower is better)
Translates to: GKVFGNFNLLHGKTIEIGPAVPP*AAFHTR
Trigger: CCTGGTGTGGAACGCGGCCCAGGGTGGGACTGCCGG...GCCGATTTCTATCGTCTTCCCGTGGAGAAGATTGAAATTGCCAAATACTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450940.5
3UTR-3UTR TCA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGGATCCAAGGACCTTCTaGTCACAGAGCACCCAGGAT +
Preference number: 2 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGDPRTF*SQSTQD
Trigger: ATCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATC...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGCTCAGGTGTTTTCATTaGGGCTACTCAGGAAACCGG +
Preference number: 2 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWLRCFH*GYSGNR
Trigger: CCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGAG...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACCTGGAACCTGGGCTATaGCAGGCCTGTCTGCCACAG +
Preference number: 2 (lower is better)
Translates to: TLTALASSEASIISLCKDLEPGL*QACLPQ
Trigger: CTGTGGCAGACAGGCCTGGCATAGCCCAGGTTCCAG...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTaGGAGTCTCCTGAGCGGGGT +
Preference number: 2 (lower is better)
Translates to: TLTALASSEASIISLCKDAVYTQ*ESPERG
Trigger: ACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGC...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTAGGAAGCAGAGGATTTaGGATTGGAGGCGCCAGGCA +
Preference number: 2 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASRKQRI*DWRRQA
Trigger: TGCCTGGCGCCTCCAATCCCAAATCCTCTGCTTCCT...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTTCAGCATCAGCTTGTTaGAAAAGGGTCACAGGCAGG +
Preference number: 2 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSSASAC*KRVTGR
Trigger: CCTGCCTGTGACCCTTTTCCAACAAGCTGATGCTGA...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGTGTCTGGTAGGGGTTTaGACTGTTGGGAGGAGTATG +
Preference number: 2 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWCLVGV*TVGRSM
Trigger: CATACTCCTCCCAACAGTCCAAACCCCTACCAGACA...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTTGTGCAGAAGCGACGTaGCTTCTGTCTGGTAGGGGT +
Preference number: 2 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASCAEAT*LLSGRG
Trigger: ACCCCTACCAGACAGAAGCCACGTCGCTTCTGCACA...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACCGTCTTCGGGATGCTaGTTTCCGCTAAGCTGCTGT +
Preference number: 2 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLPSSGC*FPLSCC
Trigger: ACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGG...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACTCACACTTCAGTGCTaGTTCCCATCAGTGACGGGG +
Preference number: 2 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLLTLQC*FPSVTG
Trigger: CCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAG...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTCTATCATCTCCCTCTaGAAAGACGCAGTCTACACC +
Preference number: 2 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLSIISL*KDAVYT
Trigger: GGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGA...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACCAGAGGATTTGGGATTaGAGGCGCCAGGCAGCCAGT +
Preference number: 2 (lower is better)
Translates to: TLTALASSEASIISLCKDQRIWD*RRQAAS
Trigger: ACTGGCTGCCTGGCGCCTCCAATCCCAAATCCTCTG...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTAGGAAACCCACGTTTGTaGCATCAGCCGGAGAGTTCA +
Preference number: 2 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLGNPRL*HQPESS
Trigger: TGAACTCTCCGGCTGATGCCACAAACGTGGGTTTCC...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTATGTGGCTCCTCCTCGTaGAAAGAGCTCGCACTTTTC +
Preference number: 2 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLCGSSS*KELALF
Trigger: GAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACA...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACTCAGGTGTTTTCATTaGGGCTACTCAGGAAACCGG +
Preference number: 2 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLLRCFH*GYSGNR
Trigger: CCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGAG...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGCTGGGTTGGATTAAGTaGGAAAACCCTTCCTTAGTT +
Preference number: 2 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLLGWIK*ENPSLV
Trigger: AACTAAGGAAGGGTTTTCCCACTTAATCCAACCCAG...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGTTAGTGTTTGGGAGTaGGAGGCAGCTGCTAGTCAG +
Preference number: 2 (lower is better)
Translates to: TLTALASSEASIISLCKDVSVWE*EAAASQ
Trigger: CTGACTAGCAGCTGCCTCCCACTCCCAAACACTAAC...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp AATGCCCTAGAAGCAGTTCCTGAGGGTTTTGAGGCAGAAAGATTGGAAGACATGGTACGTGGTGATAAATaGGGCCCCTGTTGCCCTGAG +
Preference number: 2 (lower is better)
Translates to: NALEAVPEGFEAERLEDMVRGDK*GPCCPE
Trigger: CTCAGGGCAACAGGGGCCCCATTTATCACCACGTAC...CATGTCTTCCAATCTTTCTGCCTCAAAACCCTCAGGAACTGCTTCTAGGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409945.1
3UTR-3UTR GCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGTTCACGCACACGTTGTaGATTTTCTGGTTAAAAGAA +
Preference number: 2 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLFTHTL*IFWLKE
Trigger: TTCTTTTAACCAGAAAATGCACAACGTGTGCGTGAA...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR GCA 90 bp TTTGTACAAGGGCAACAGAACTCACTGATAGTGACTTCTGCCCATCGTGATGTGAAATGGGGCCCCTGTTaGCCTGAGGATCTTGAGAGA +
Preference number: 2 (lower is better)
Translates to: FVQGQQNSLIVTSAHRDVKWGPC*PEDLER
Trigger: TCTCTCAAGATCCTCAGGGCAACAGGGGCCCCATTT...CACATCACGATGGGCAGAAGTCACTATCAGTGAGTTCTGTTGCCCTTGTACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409945.1
3UTR-3UTR CCA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTCTGGGTTGGATTAAGTaGGAAAACCCTTCCTTAGTT +
Preference number: 2 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASLGWIK*ENPSLV
Trigger: AACTAAGGAAGGGTTTTCCCACTTAATCCAACCCAG...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTAATAGAAATCTGGGTTaGATTAAGTGGGAAAACCCT +
Preference number: 2 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTNRNLG*IKWENP
Trigger: AGGGTTTTCCCACTTAATCCAACCCAGATTTCTATT...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR TCA 90 bp GAAGTCAGTGAGATGATATCAAATGCCCTAGAAGCAGTTCCTGAGGGTTTTGAGGAGGATCTTGAGAGATaGTACATAAAAGTCTTTGGA +
Preference number: 2 (lower is better)
Translates to: EVSEMISNALEAVPEGFEEDLER*YIKVFG
Trigger: TCCAAAGACTTTTATGTATCATCTCTCAAGATCCTC...CTCAAAACCCTCAGGAACTGCTTCTAGGGCATTTGATATCATCTCACTGACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409945.1
3UTR-3UTR CCA 90 bp GCTCCATTTCTTTATAATGAAGTGGAACTCCTCTTTGTACAAGGGCAACAGAACGAGCACGTACAGAAATaGCACAGTGTTATTATTATG +
Preference number: 2 (lower is better)
Translates to: APFLYNEVELLFVQGQQNEHVQK*HSVIIM
Trigger: CATAATAATAACACTGTGCCATTTCTGTACGTGCTC...GTTCTGTTGCCCTTGTACAAAGAGGAGTTCCACTTCATTATAAAGAAATGGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
3UTR-3UTR TCA 90 bp ATAGTGCTTTACAGAGGTTACAGAGCACGTACAGAAATGGCACAGTGTTATTATAATAAATATATCAATTaGCTCTCAGAGCACAGGCAG +
Preference number: 2 (lower is better)
Translates to: IVLYRGYRARTEMAQCYYNKYIN*LSEHRQ
Trigger: CTGCCTGTGCTCTGAGAGTCAATTGATATATTTATT...ATAATAACACTGTGCCATTTCTGTACGTGCTCTGTAACCTCTGTAAAGCACTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
3UTR GCA 72 bp AGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTaGTGGACGGCACTTCAGGGCACAACCCACACGCGT +
Preference number: 3 (lower is better)
Translates to: RPHAQAGPAARA*WTALQGTTHTR
Trigger: ACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CAA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCGTGCAGCGGCTGCCCTaGCTTAGCAGAGCGACTCAC +
Preference number: 3 (lower is better)
Translates to: PHAQAGPAARACWTALQGVQRLP*LSRATH
Trigger: GTGAGTCGCTCTGCTAAGCAAGGGCAGCCGCTGCAC...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 72 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTaGACGGCACTTCAGGGCACAACCCACACGCGTCTT +
Preference number: 3 (lower is better)
Translates to: PHAQAGPAARAC*TALQGTTHTRL
Trigger: AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR TCA 72 bp GCCCTGCCTGCCCCGCTTCCACACAGGAAGAGAGGCTaGGGCGCTGTGGACGGCAGCAGCTGCAGTCCTCGG +
Preference number: 3 (lower is better)
Translates to: ALPAPLPHRKRG*GAVDGSSCSPR
Trigger: CCGAGGACTGCAGCTGCTGCCGTCCACAGCGCCTCAGCCTCTCTTCCTGTGTGGAAGCGGGGCAGGCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 72 bp CCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTaGTTAGCAGAGCGACTCACCCTCGGAGGCCACCCT +
Preference number: 3 (lower is better)
Translates to: PLACGLTCSGCP*LAERLTLGGHP
Trigger: AGGGTGGCCTCCGAGGGTGAGTCGCTCTGCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 72 bp GCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTaGCCTTGCTTAGCAGAGCGACTCACCCTCGGAGGC +
Preference number: 3 (lower is better)
Translates to: AGPLACGLTCSG*PCLAERLTLGG
Trigger: GCCTCCGAGGGTGAGTCGCTCTGCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CAA 90 bp AAAGGGAAGAAGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGGTGCAGCGGCTGCCCTaGCTTAGCAGAGCGACTCAC +
Preference number: 3 (lower is better)
Translates to: KGKKAKATRTGRPGRTRLVQRLP*LSRATH
Trigger: GTGAGTCGCTCTGCTAAGCAAGGGCAGCCGCTGCAC...CAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCTTCTTCCCTTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 72 bp GCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTaGACCAGCCCCCGTGGCTGCCACGTGTTGCAGAGC +
Preference number: 3 (lower is better)
Translates to: APTGSWVGDIQS*TSPRGCHVLQS
Trigger: GCTCTGCAACACGTGGCAGCCACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 72 bp CTGTGTGAGAGAGCCCAGCACCTACTGGCAGCTGGGTaGGCGACATCCAGAGCTGCACCAGCCCCCGTGGCT +
Preference number: 3 (lower is better)
Translates to: LCERAQHLLAAG*ATSRAAPAPVA
Trigger: AGCCACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTCTCTCACACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 72 bp CTGACCCCACACACCTCCCACAGCGGAGCAACGGCATaGCGCTGCCTCCATACCTGCGGTTCACGCACACGT +
Preference number: 3 (lower is better)
Translates to: LTPHTSHSGATA*RCLHTCGSRTR
Trigger: ACGTGTGCGTGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTGTGGGGTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 72 bp GAACCTGGGCTATGCCAGGCCTGTCTGCCACAGCCCTaGCTGCCCCGCTTCCACACAGGAAGAGAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: EPGLCQACLPQP*LPRFHTGREAE
Trigger: CTCAGCCTCTCTTCCTGTGTGGAAGCGGGGCAGGCAGGGCTGTGGCAGACAGGCCTGGCATAGCCCAGGTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 72 bp AGGAAACCGGTCAGGCTGCCCAGGACACCTGGAACCTaGGCTATGCCAGGCCTGTCTGCCACAGCCCTGCCT +
Preference number: 3 (lower is better)
Translates to: RKPVRLPRTPGT*AMPGLSATALP
Trigger: AGGCAGGGCTGTGGCAGACAGGCCTGGCATAGCCCAGGTTCCAGGTGTCCTGGGCAGCCTGACCGGTTTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR TCA 72 bp CCAGCCCCCGTGGCTGCCACGTGTTGCAGAGCTAAGTaGCTACATGCACTGGCCAGGCCTCAGAGGAGCCGT +
Preference number: 3 (lower is better)
Translates to: PAPVAATCCRAK*LHALARPQRSR
Trigger: ACGGCTCCTCTGAGGCCTGGCCAGTGCATGTAGTCACTTAGCTCTGCAACACGTGGCAGCCACGGGGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 72 bp CCACACACCTCCCACAGCGGAGCAACGGCATGCCGCTaGCTCCATACCTGCGGTTCACGCACACGTTGTGCA +
Preference number: 3 (lower is better)
Translates to: PHTSHSGATACR*LHTCGSRTRCA
Trigger: TGCACAACGTGTGCGTGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 72 bp GAAGTCCTGAAAGCAGACCCCACTTCTGCCCGCTTCTaGTCAGCACCAGCGCGGTGGCGCAGTGGCCTGAGA +
Preference number: 3 (lower is better)
Translates to: EVLKADPTSARF*SAPARWRSGLR
Trigger: TCTCAGGCCACTGCGCCACCGCGCTGGTGCTGAGCAGAAGCGGGCAGAAGTGGGGTCTGCTTTCAGGACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR TCA 72 bp AGCACCAGCGCGGTGGCGCAGTGGCCTGAGACACTGTaGGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAA +
Preference number: 3 (lower is better)
Translates to: STSAVAQWPETL*EAGQGERESSE
Trigger: TTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTGTCTCAGGCCACTGCGCCACCGCGCTGGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 72 bp GGCAGCCAGTCCCCATGCCCAGGAAACCCACGTTTGTaGCATCAGCCGGAGAGTTCATCGGGAGTAGAGCCG +
Preference number: 3 (lower is better)
Translates to: GSQSPCPGNPRL*HQPESSSGVEP
Trigger: CGGCTCTACTCCCGATGAACTCTCCGGCTGATGCCACAAACGTGGGTTTCCTGGGCATGGGGACTGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 72 bp CTGGGTGGGCGACATCCAGAGCTGCACCAGCCCCCGTaGCTGCCACGTGTTGCAGAGCTAAGTGACTACATG +
Preference number: 3 (lower is better)
Translates to: LGGRHPELHQPP*LPRVAELSDYM
Trigger: CATGTAGTCACTTAGCTCTGCAACACGTGGCAGCCACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 72 bp CAAGGACCTTCTGATCACAGAGCACCCAGGATAAGCTaGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTG +
Preference number: 3 (lower is better)
Translates to: QGPSDHRAPRIS*TLGLRADVQRL
Trigger: CAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTATCCTGGGTGCTCTGTGATCAGAAGGTCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 72 bp GGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTaGAAAAGGGTCACAGGCAGGGGAGCGCCTGACTCC +
Preference number: 3 (lower is better)
Translates to: GTKQAAGSASAC*KRVTGRGAPDS
Trigger: GGAGTCAGGCGCTCCCCTGCCTGTGACCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR TCA 72 bp CTGCTTCCCATCAGTGACGGGGCTGACGAGAAACCGTaGGGCCCAGGTGACAAGCAGGCTCAGGACATGCGA +
Preference number: 3 (lower is better)
Translates to: LLPISDGADEKP*GPGDKQAQDMR
Trigger: TCGCATGTCCTGAGCCTGCTTGTCACCTGGGCCTCACGGTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CAA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAACCAGGAAACCCACGTTaGTGGCATCAGCCGGAGAGT +
Preference number: 3 (lower is better)
Translates to: RPKGRRGACGAGTSGGNEPGNPR*WHQPES
Trigger: ACTCTCCGGCTGATGCCACAAACGTGGGTTTCCTGG...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CAA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAGCAGAGGATTTGGGATaGGAGGCGCCAGGCAGCCAG +
Preference number: 3 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRAEDLG*EAPGSQ
Trigger: CTGGCTGCCTGGCGCCTCCAATCCCAAATCCTCTGC...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CAA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCGCAGAGGATTTGGGATaGGAGGCGCCAGGCAGCCAG +
Preference number: 3 (lower is better)
Translates to: TSMADALRHVCRSDVASVAEDLG*EAPGSQ
Trigger: CTGGCTGCCTGGCGCCTCCAATCCCAAATCCTCTGC...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CAA 90 bp AGAGTTGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCGTGCAGCGGCTGCCCTaGCTTAGCAGAGCGACTCAC +
Preference number: 3 (lower is better)
Translates to: RVGSLGRSASRKRTDVYGVQRLP*LSRATH
Trigger: GTGAGTCGCTCTGCTAAGCAAGGGCAGCCGCTGCAC...GCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR TCA 72 bp ACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTaGACACGGAGGAAAGTGGCTGGCCTGACCCCACAC +
Preference number: 3 (lower is better)
Translates to: TVRSRSGRTRVI*TRRKVAGLTPH
Trigger: GTGTGGGGTCAGGCCAGCCACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR TCA 72 bp CTGCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTaGGCGGGGTTAGTGTTTGGGAGTGGGAGGCAGCTG +
Preference number: 3 (lower is better)
Translates to: LQRRSLHPVRVS*AGLVFGSGRQL
Trigger: CAGCTGCCTCCCACTCCCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 72 bp GCACTTCAGGGCACAACCCACACGCGTCTTTGGACTTaGAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGG +
Preference number: 3 (lower is better)
Translates to: ALQGTTHTRLWT*RHSARLLASRR
Trigger: CCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGACGCGTGTGGGTTGTGCCCTGAAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 72 bp AGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATaGCAGACGCTCTCAGACACGTGTGCAGAAGCGACG +
Preference number: 3 (lower is better)
Translates to: RAQCFTETHRRL*QTLSDTCAEAT
Trigger: CGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 72 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTaGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCA +
Preference number: 3 (lower is better)
Translates to: GWAPSSSRHLQL*RHQKPLSSPSA
Trigger: TGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 72 bp TGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTaGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCT +
Preference number: 3 (lower is better)
Translates to: WTALQGTTHTRL*TCRHSARLLAS
Trigger: AGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CAA 90 bp GGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCCAGGAAACCCACGTTaGTGGCATCAGCCGGAGAGT +
Preference number: 3 (lower is better)
Translates to: GRPARHDTYSSGVIRSLYPGNPR*WHQPES
Trigger: ACTCTCCGGCTGATGCCACAAACGTGGGTTTCCTGG...ATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CAA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACCCAGGAAACCCACGTTaGTGGCATCAGCCGGAGAGT +
Preference number: 3 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNPGNPR*WHQPES
Trigger: ACTCTCCGGCTGATGCCACAAACGTGGGTTTCCTGG...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 72 bp GCAGCTGCTAGTCAGAGTTGGGTCCTTAGGGCGCAGTaGTTCACGGAAACGCACAGACGTCTATGGCAGACG +
Preference number: 3 (lower is better)
Translates to: AAASQSWVLRAQ*FTETHRRLWQT
Trigger: CGTCTGCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCTGACTAGCAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 72 bp CTGCCACGTGTTGCAGAGCTAAGTGACTACATGCACTaGCCAGGCCTCAGAGGAGCCGTCCCTGTGCTCAAA +
Preference number: 3 (lower is better)
Translates to: LPRVAELSDYMH*PGLRGAVPVLK
Trigger: TTTGAGCACAGGGACGGCTCCTCTGAGGCCTGGCCAGTGCATGTAGTCACTTAGCTCTGCAACACGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 72 bp TGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTaGCTTCTGTCTGGTAGGGGTTTGGACTGTTGGGAG +
Preference number: 3 (lower is better)
Translates to: WQTLSDTCAEAT*LLSGRGLDCWE
Trigger: CTCCCAACAGTCCAAACCCCTACCAGACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 72 bp AGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGGAGTaGGAGGCAGCTGCTAGTCAGAGTTGGGTCCTTAGG +
Preference number: 3 (lower is better)
Translates to: SASLLSGVSVWE*EAAASQSWVLR
Trigger: CCTAAGGACCCAACTCTGACTAGCAGCTGCCTCCCACTCCCAAACACTAACCCCGCTCAGGAGACTCGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 72 bp TCACCCTCGGAGGCCACCCTGTGTGGCTCCTCCTCGTaGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTA +
Preference number: 3 (lower is better)
Translates to: SPSEATLCGSSS*KELALFSIAVL
Trigger: TAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACACAGGGTGGCCTCCGAGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CAA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCTCAGCATCAGCTaGTTGGAAAAGGGTCACAGG +
Preference number: 3 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLWLSIS*LEKGHR
Trigger: CCTGTGACCCTTTTCCAACAAGCTGATGCTGAGCCA...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 72 bp GCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTaGAAAGACGCAGTCTACACCCAGTGCGAGTCTCCT +
Preference number: 3 (lower is better)
Translates to: ALASSEASIISL*KDAVYTQCESP
Trigger: AGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CAA 90 bp TGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCAGACGTCTCAGGTGTTTTCATaGAGGCTACTCAGGAAACCG +
Preference number: 3 (lower is better)
Translates to: WVLRAQCFTETHRRLWQTSQVFS*RLLRKP
Trigger: CGGTTTCCTGAGTAGCCTCAATGAAAACACCTGAGA...CGTCTGCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CAA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTTGGCTCAGCATCAGCTaGTTGGAAAAGGGTCACAGG +
Preference number: 3 (lower is better)
Translates to: VFGLADIPRGFWPLEGKAWLSIS*LEKGHR
Trigger: CCTGTGACCCTTTTCCAACAAGCTGATGCTGAGCCA...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR GCA 72 bp GCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTaGTGTCTGGGAAAGTCAACCGTCTATGTCCCAAAT +
Preference number: 3 (lower is better)
Translates to: ATPSSGCCFPLS*CLGKSTVYVPN
Trigger: ATTTGGGACATAGACGGTTGACTTTCCCAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CAA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGTCTCAGGTGTTTTCATaGAGGCTACTCAGGAAACCG +
Preference number: 3 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLSQVFS*RLLRKP
Trigger: CGGTTTCCTGAGTAGCCTCAATGAAAACACCTGAGA...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CCA 72 bp CGCGTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTaGCCTCTCGAAGGCAAAGCTTTTCAGCGATTTCAT +
Preference number: 3 (lower is better)
Translates to: RVFGLADIPRGF*PLEGKAFQRFH
Trigger: ATGAAATCGCTGAAAAGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGACGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CAA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTCGGTTCACGCACACGTaGTGCATTTTCTGGTTAAAA +
Preference number: 3 (lower is better)
Translates to: HCEKPVRANESHLNTEESRFTHT*CIFWLK
Trigger: TTTTAACCAGAAAATGCACAACGTGTGCGTGAACCG...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CAA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTTCTCAGGTGTTTTCATaGAGGCTACTCAGGAAACCG +
Preference number: 3 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASSQVFS*RLLRKP
Trigger: CGGTTTCCTGAGTAGCCTCAATGAAAACACCTGAGA...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CAA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTCGGTTCACGCACACGTaGTGCATTTTCTGGTTAAAA +
Preference number: 3 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASRFTHT*CIFWLK
Trigger: TTTTAACCAGAAAATGCACAACGTGTGCGTGAACCG...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR-3UTR CAA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACCGGTTCACGCACACGTaGTGCATTTTCTGGTTAAAA +
Preference number: 3 (lower is better)
Translates to: VWLLLVERARTFQHRSFNRFTHT*CIFWLK
Trigger: TTTTAACCAGAAAATGCACAACGTGTGCGTGAACCG...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR TCA 72 bp CTGATAGTGACTTCTGCCCATCGTGATGTGTGCGGCTaGGTGCTGAGTAAGACAACATGCTTGTACTTGTCT +
Preference number: 3 (lower is better)
Translates to: LIVTSAHRDVCG*VLSKTTCLYLS
Trigger: AGACAAGTACAAGCATGTTGTCTTACTCAGCACTCAGCCGCACACATCACGATGGGCAGAAGTCACTATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
3UTR CCA 72 bp ATGACATCATTAGAATTGGATGAAGTCTCAATATTCTaGTACGTGGTGATAAATGGGGCCCCTGTTGCCCTG +
Preference number: 3 (lower is better)
Translates to: MTSLELDEVSIF*YVVINGAPVAL
Trigger: CAGGGCAACAGGGGCCCCATTTATCACCACGTACCAGAATATTGAGACTTCATCCAATTCTAATGATGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409945.1
3UTR CCA 72 bp TTAAAAATATACTCGCTCCATTTCTTTATAATGAAGTaGAACTCCTCTTTGTACAAGGGCAACAGAACTCAC +
Preference number: 3 (lower is better)
Translates to: LKIYSLHFFIMK*NSSLYKGNRTH
Trigger: GTGAGTTCTGTTGCCCTTGTACAAAGAGGAGTTCCACTTCATTATAAAGAAATGGAGCGAGTATATTTTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR CCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCGCACCCAGGATAAGCTaGACCCTTGGCCTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: PHAQAGPAARACWTALQGAPRIS*TLGLRA
Trigger: AGCCCGCAGGCCAAGGGTCCAGCTTATCCTGGGTGC...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCGCAACGGCATGCCGCTaGCTCCATACCTGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: PHAQAGPAARACWTALQGATACR*LHTCGS
Trigger: TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGC...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp AAAGGGAAGAAGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGGCTGGACCCTTGGCCTaGGGGCTGACGTGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: KGKKAKATRTGRPGRTRLAGPLA*GLTCSG
Trigger: GCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGC...CAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCTTCTTCCCTTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp AAAGGGAAGAAGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCCGGCAGTCCCACCCTaGGCCGCGTTCCACACCAGG +
Preference number: 4 (lower is better)
Translates to: KGKKAKATRTGRPGRTRLPAVPP*AAFHTR
Trigger: CCTGGTGTGGAACGCGGCCCAGGGTGGGACTGCCGG...CAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCTTCTTCCCTTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCCAGCTTAAGAAGGGCTaGGCGCCCAGCTCGTCACGA +
Preference number: 4 (lower is better)
Translates to: PHAQAGPAARACWTALQGQLKKG*APSSSR
Trigger: TCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTG...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCAAATCGGCAACTCTCTaGCTCAGGGAGCCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: PHAQAGPAARACWTALQGKSATL*LREPAV
Trigger: GACTGCCGGCTCCCTGAGGCAGAGAGTTGCCGATTT...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCCAGAGGATTTGGGATTaGAGGCGCCAGGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: PHAQAGPAARACWTALQGQRIWD*RRQAAS
Trigger: ACTGGCTGCCTGGCGCCTCCAATCCCAAATCCTCTG...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCGGATTGCTAAGGCTGTaGGGACAGTGCCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: PHAQAGPAARACWTALQGGLLRL*GQCPLL
Trigger: CAGAAGTGGGCACTGTCCTCACAGCCTTAGCAATCC...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTCACAGGAAGAGAGGCTaGGGCGCTGTGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLHRKRG*GAVDGS
Trigger: GCTGCCGTCCACAGCGCCTCAGCCTCTCTTCCTGTG...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCCTCACACTTCAGTGCTaGTTCCCATCAGTGACGGGG +
Preference number: 4 (lower is better)
Translates to: PHAQAGPAARACWTALQGLTLQC*FPSVTG
Trigger: CCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAG...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCGCTCTCAGACACGTGTaGAGAAGCGACGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PHAQAGPAARACWTALQGALRHV*RSDVAS
Trigger: AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGC...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CACACCTCCCACAGCGGAGCAACGGCATGCCGCTGCCTCCATACCTGCGGTTCACCGGCCGCACGCGCCTaGTGGACGGCACTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: HTSHSGATACRCLHTCGSPAARA*WTALQG
Trigger: GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG...TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp AAAGGGAAGAAGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGGGCTCTGAGGTGGGCTaGGGACGGGACACCGAACTC +
Preference number: 4 (lower is better)
Translates to: KGKKAKATRTGRPGRTRLGSEVG*GRDTEL
Trigger: GAGTTCGGTGTCCCGTCCCCAGCCCACCTCAGAGCC...CAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCTTCTTCCCTTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCACACCAGGTCCAGGGCAGGGGCATAGGTCCTCTCACCAGGGATGCGCACCTGCCGGCAGTCCCACCCTaGGCCGCGTTCCACACCAGG +
Preference number: 4 (lower is better)
Translates to: PHQVQGRGIGPLTRDAHLPAVPP*AAFHTR
Trigger: CCTGGTGTGGAACGCGGCCCAGGGTGGGACTGCCGG...CAGGTGCGCATCCCTGGTGAGAGGACCTATGCCCCTGCCCTGGACCTGGTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS-3UTR CCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTGAGGCTGAGGCGCTGTaGACGGCAGCAGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLEAEAL*TAAAAV
Trigger: GACTGCAGCTGCTGCCGTCCACAGCGCCTCAGCCTC...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CAA 72 bp ACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTaGCTTAGCAGAGCGACTCACCCTCGGAGGCCACCC +
Preference number: 4 (lower is better)
Translates to: TLGLRADVQRLP*LSRATHPRRPP
Trigger: GGGTGGCCTCCGAGGGTGAGTCGCTCTGCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp AAAGGGAAGAAGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGAGCGGCGCGGTTATCTaGAGCTCCCCACGTGGATGG +
Preference number: 4 (lower is better)
Translates to: KGKKAKATRTGRPGRTRLSGAVI*SSPRGW
Trigger: CCATCCACGTGGGGAGCTTCAGATAACCGCGCCGCT...CAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCTTCTTCCCTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACCAGCCCCCGTGGGTGGCGCAGTGGCCTaGGACACTGTGAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: QHLLAAGWATSRAAPAPVGGAVA*DTVRSR
Trigger: CCGGCTTCTCACAGTGTCTCAGGCCACTGCGCCACC...CACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp AAAGGGAAGAAGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGACTTCTGCCCGCTTCTaGTCAGCACCAGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: KGKKAKATRTGRPGRTRLTSARF*SAPARW
Trigger: CCACCGCGCTGGTGCTGAGCAGAAGCGGGCAGAAGT...CAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCTTCTTCCCTTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTGAGCCCAGCACCTACTaGCAGCTGGGTGGGCGACAT +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLEPSTY*QLGGRH
Trigger: ATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTC...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTGCTGCCCAGGACACCTaGAACCTGGGCTATGCCAGG +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLAAQDT*NLGYAR
Trigger: CCTGGCATAGCCCAGGTTCCAGGTGTCCTGGGCAGC...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTGGCCTGAGACACTGTaGGAAGCCGGTCAGGGCGAA +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLWPETL*EAGQGE
Trigger: TTCGCCCTGACCGGCTTCTCACAGTGTCTCAGGCCA...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCCTTGGCCTGCGGGCTaGCGTGCAGCGGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPPWPAG*RAAAAL
Trigger: AAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGG...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTACCGTGAGGCCCAGGTaGCAAGCAGGCTCAGGACAT +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLTVRPR*QAGSGH
Trigger: ATGTCCTGAGCCTGCTTGTCACCTGGGCCTCACGGT...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTGGAGCCCAGCACCTACTaGCAGCTGGGTGGGCGACAT +
Preference number: 4 (lower is better)
Translates to: GRTRLLDGTSGHNPHASLEPSTY*QLGGRH
Trigger: ATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTC...CAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACCAGCCCCCGTGACCAAAGGGCAGACGTaGAGCATGCGGGGCCGGAAC +
Preference number: 4 (lower is better)
Translates to: QHLLAAGWATSRAAPAPVTKGQT*SMRGRN
Trigger: GTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGT...CACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCCGACACTTACAGCTCTaGCGTCATCAGAAGCCTCTA +
Preference number: 4 (lower is better)
Translates to: PHAQAGPAARACWTALQGRHLQL*RHQKPL
Trigger: TAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCG...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCAGGCAGGGGAGCGCCTaGCTCCAGCGGTGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSRQGSA*LQRCPF
Trigger: GAAAGGACACCGCTGGAGTCAGGCGCTCCCCTGCCT...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCAGTGGGGACAGGAGATaGTATTGTTTAAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: PHAQAGPAARACWTALQGSGDRR*YCLNLG
Trigger: CCCCAGGTTTAAACAATAGCATCTCCTGTCCCCACT...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACCAGCCCCCGTGGGAAACCGGTCAGGCTaGCCAGGACACCTGGAACCT +
Preference number: 4 (lower is better)
Translates to: QHLLAAGWATSRAAPAPVGNRSG*PGHLEP
Trigger: AGGTTCCAGGTGTCCTGGGCAGCCTGACCGGTTTCC...CACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCACCGGCAGTCCCACCCTaGGCCGCGTTCCACACCAGG +
Preference number: 4 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPPAVPP*AAFHTR
Trigger: CCTGGTGTGGAACGCGGCCCAGGGTGGGACTGCCGG...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTAGTGACTACATGCACTaGCCAGGCCTCAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLSDYMH*PGLRGA
Trigger: GGCTCCTCTGAGGCCTGGCCAGTGCATGTAGTCACT...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCCTGCACCAGCCCCCGTaGCTGCCACGTGTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSLHQPP*LPRVAE
Trigger: CTCTGCAACACGTGGCAGCCACGGGGGCTGGTGCAG...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCTCAGCACCAGCGCGGTaGCGCAGTGGCCTGAGACAC +
Preference number: 4 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSSAPAR*RSGLRH
Trigger: GTGTCTCAGGCCACTGCGCCACCGCGCTGGTGCTGA...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCGAGGCTGAGGCGCTGTaGACGGCAGCAGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSEAEAL*TAAAAV
Trigger: GACTGCAGCTGCTGCCGTCCACAGCGCCTCAGCCTC...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTGGTACAGACGATAGATaGGGTCATGACCGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLGTDDR*GHDRRS
Trigger: GGACCTCCGGTCATGACCTCATCTATCGTCTGTACC...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACCAGCCCCCGTGTGTCCTGAGGGACCCTaGAGCTGGTACCACCAGATG +
Preference number: 4 (lower is better)
Translates to: QHLLAAGWATSRAAPAPVCPEGP*SWYHQM
Trigger: CATCTGGTGGTACCAGCTTCAGGGTCCCTCAGGACA...CACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACCAGCCCCCGTGCGCTGCCTCCATACCTaGGGTTCACGCACACGTTGT +
Preference number: 4 (lower is better)
Translates to: QHLLAAGWATSRAAPAPVRCLHT*GSRTRC
Trigger: ACAACGTGTGCGTGAACCGCAGGTATGGAGGCAGCG...CACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CACACCTCCCACAGCGGAGCAACGGCATGCCGCTGCCTCCATACCTGCGGTTCAAGCGGAGCAACGGCATaGCGCTGCCTCCATACCTGC +
Preference number: 4 (lower is better)
Translates to: HTSHSGATACRCLHTCGSSGATA*RCLHTC
Trigger: GCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCT...TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TGTGAGAGAGCCCAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCAGCCTGCGGGCTGACGTaGAGCGGCTGCCCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: CERAQHLLAAGWATSRAAACGLT*SGCPCL
Trigger: TAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGC...TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTCTCTCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTTATGCCAGGCCTGTCTaGCACAGCCCTGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPYARPV*HSPACP
Trigger: GGGGCAGGCAGGGCTGTGGCAGACAGGCCTGGCATA...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp AAAGGGAAGAAGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTCACACTTCAGTGCTaGTTCCCATCAGTGACGGGG +
Preference number: 4 (lower is better)
Translates to: KGKKAKATRTGRPGRTRLLTLQC*FPSVTG
Trigger: CCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAG...CAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCTTCTTCCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGCCGGCCGCACGCGCCTaGTGGACGGCACTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLPAARA*WTALQG
Trigger: GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCTTCTCTAGGAGCAGGTaGCTCCAAAGCTTTAGTCTT +
Preference number: 4 (lower is better)
Translates to: PHAQAGPAARACWTALQGFSRSR*LQSFSL
Trigger: AAGACTAAAGCTTTGGAGCCACCTGCTCCTAGAGAA...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp AAAGGGAAGAAGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGTCCTCATGTCTTCCTTaGGGATGGCCGTCCAACCCT +
Preference number: 4 (lower is better)
Translates to: KGKKAKATRTGRPGRTRLSSCLP*GWPSNP
Trigger: AGGGTTGGACGGCCATCCCCAAGGAAGACATGAGGA...CAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCTTCTTCCCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTAAGGAGGCAAGGTCATaGCCTGAGACTTCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLKEARS*PETSAP
Trigger: CGGAGCTGAAGTCTCAGGCCATGACCTTGCCTCCTT...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACCAGCCCCCGTGCAGAGGATTTGGGATTaGAGGCGCCAGGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: QHLLAAGWATSRAAPAPVQRIWD*RRQAAS
Trigger: ACTGGCTGCCTGGCGCCTCCAATCCCAAATCCTCTG...CACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACCAGCCCCCGTGAGCGGGGTTAGTGTTTaGGAGTGGGAGGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QHLLAAGWATSRAAPAPVSGVSV*EWEAAA
Trigger: AGCAGCTGCCTCCCACTCCCAAACACTAACCCCGCT...CACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTATTCCGCGAGGCTTCTaGCCTCTCGAAGGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLIPRGF*PLEGKA
Trigger: AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAAT...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGCCGCACGCGCCTGCTaGACGGCACTTCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPAARAC*TALQGT
Trigger: TGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGC...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCAGTTTCTGGCCCAGCTaGTCAACAGGAATTAGATTA +
Preference number: 4 (lower is better)
Translates to: PHAQAGPAARACWTALQGSFWPS*STGIRL
Trigger: TAATCTAATTCCTGTTGATCAGCTGGGCCAGAAACT...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTCCTTGGCCTGCGGGCTaGCGTGCAGCGGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTPWPAG*RAAAAL
Trigger: AAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGG...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTCCTTGGCCTGCGGGCTaGCGTGCAGCGGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: QTSMADALRHVCRSDVASPWPAG*RAAAAL
Trigger: AAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGG...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCGTAAATGTGAAGTCCTaGTGGTACAAGCTTTGCAAC +
Preference number: 4 (lower is better)
Translates to: PHAQAGPAARACWTALQGVNVKS*WYKLCN
Trigger: GTTGCAAAGCTTGTACCAGCAGGACTTCACATTTAC...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CACACCTCCCACAGCGGAGCAACGGCATGCCGCTGCCTCCATACCTGCGGTTCAGGCAGCCAGTCCCCATaGCCAGGAAACCCACGTTTG +
Preference number: 4 (lower is better)
Translates to: HTSHSGATACRCLHTCGSGSQSP*PGNPRL
Trigger: CAAACGTGGGTTTCCTGGGCATGGGGACTGGCTGCC...TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATGGCAGACGTGGAGCATaGGGGGCCGGAACGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GRPARHDTYSSGVIRSLYGRRGA*GAGTSG
Trigger: CCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCC...ATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CACACCTCCCACAGCGGAGCAACGGCATGCCGCTGCCTCCATACCTGCGGTTCATGCAGCGGCTGCCCTTaGTTAGCAGAGCGACTCACC +
Preference number: 4 (lower is better)
Translates to: HTSHSGATACRCLHTCGSCSGCP*LAERLT
Trigger: GGTGAGTCGCTCTGCTAAGCAAGGGCAGCCGCTGCA...TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTGTGGACGGCAGCAGCTaGAGTCCTCGGGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPVDGSS*SPRDPR
Trigger: CCTTGGATCCCGAGGACTGCAGCTGCTGCCGTCCAC...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCCTGGAACCTGGGCTATaGCAGGCCTGTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSLEPGL*QACLPQ
Trigger: CTGTGGCAGACAGGCCTGGCATAGCCCAGGTTCCAG...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGGATGGGCGCCGCCATGTTaGCGAGGGCGGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QQLQSSGSKDLLITEHPGWAPPC*RGRVSR
Trigger: TCTGGAGACCCGCCCTCGCCAACATGGCGGCGCCCA...TCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251722.10
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACCAGCCCCCGTGCAGGCGTCTCTGCACTaGAGAGGATGTAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: QHLLAAGWATSRAAPAPVQASLH*RGCSCS
Trigger: AGAGCAGCTACATCCTCTCCAGTGCAGAGACGCCTG...CACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTGGAAACCCACGTTTGTaGCATCAGCCGGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLGNPRL*HQPESS
Trigger: TGAACTCTCCGGCTGATGCCACAAACGTGGGTTTCC...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTTCATCCCCGCCAAGTaGCTGGTAAATGTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLFIPAK*LVNVKS
Trigger: GGACTTCACATTTACCAGTCACTTGGCGGGGATGAA...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp AAAGGGAAGAAGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCAGCGTGGCATCTTCTaGGATCTCTATGTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: KGKKAKATRTGRPGRTRLQRGIF*DLYVSQ
Trigger: TTGGGAGACATAGAGATCTCAGAAGATGCCACGCTG...CAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCTTCTTCCCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp AGCCGGCAGTCCCACCCTGGGCCGCGTTCCACACCAGGTCCAGGGCAGGGGCATAAGTTTTCGCCTTTCTaGAGGGGCTCTAAGCAGATC +
Preference number: 4 (lower is better)
Translates to: SRQSHPGPRSTPGPGQGHKFSPF*RGSKQI
Trigger: GATCTGCTTAGAGCCCCTTCAGAAAGGCGAAAACTT...ATGCCCCTGCCCTGGACCTGGTGTGGAACGCGGCCCAGGGTGGGACTGCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS-3UTR TCA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAAAGCGGCGCGGTTATCTaGAGCTCCCCACGTGGATGG +
Preference number: 4 (lower is better)
Translates to: RPKGRRGACGAGTSGGNESGAVI*SSPRGW
Trigger: CCATCCACGTGGGGAGCTTCAGATAACCGCGCCGCT...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTGTGTTGCAGAGCTAAGTaGCTACATGCACTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRTRLLDGTSGHNPHASLCCRAK*LHALAR
Trigger: CCTGGCCAGTGCATGTAGTCACTTAGCTCTGCAACA...CAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp TGTGAGAGAGCCCAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCATGGCCTGAGACACTGTaGGAAGCCGGTCAGGGCGAA +
Preference number: 4 (lower is better)
Translates to: CERAQHLLAAGWATSRAAWPETL*EAGQGE
Trigger: TTCGCCCTGACCGGCTTCTCACAGTGTCTCAGGCCA...TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTCTCTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp TCAGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGTGGCCTGAGACACTGTaGGAAGCCGGTCAGGGCGAA +
Preference number: 4 (lower is better)
Translates to: SDQRADVEHAGPERVGEMWPETL*EAGQGE
Trigger: TTCGCCCTGACCGGCTTCTCACAGTGTCTCAGGCCA...CATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATGGTGGCGCAGTGGCCTaGGACACTGTGAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: GRPARHDTYSSGVIRSLYGGAVA*DTVRSR
Trigger: CCGGCTTCTCACAGTGTCTCAGGCCACTGCGCCACC...ATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACCAGCCCCCGTGGGGGAAATGAAGTCCTaGAAGCAGACCCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: QHLLAAGWATSRAAPAPVGEMKS*KQTPLL
Trigger: CAGAAGTGGGGTCTGCTTTCAGGACTTCATTTCCCC...CACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACCAGCCCCCGTGGATCCAAGGACCTTCTaGTCACAGAGCACCCAGGAT +
Preference number: 4 (lower is better)
Translates to: QHLLAAGWATSRAAPAPVDPRTF*SQSTQD
Trigger: ATCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATC...CACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTCTCAGGTGTTTTCATTaGGGCTACTCAGGAAACCGG +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLLRCFH*GYSGNR
Trigger: CCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGAG...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CACACCTCCCACAGCGGAGCAACGGCATGCCGCTGCCTCCATACCTGCGGTTCACTGTTGGGAGGAGTATaGGGGACAAAGCAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: HTSHSGATACRCLHTCGSLLGGV*GTKQAA
Trigger: AGCGGCCTGCTTTGTCCCTCATACTCCTCCCAACAG...TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCAAATCGGCAACTCTCTaGCTCAGGGAGCCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSKSATL*LREPAV
Trigger: GACTGCCGGCTCCCTGAGGCAGAGAGTTGCCGATTT...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAGGCGACATCCAGAGCTaGACCAGCCCCCGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRGDIQS*TSPRGC
Trigger: GCAGCCACGGGGGCTGGTGCAGCTCTGGATGTCGCC...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TGTGAGAGAGCCCAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCAGCAACGGCATGCCGCTaGCTCCATACCTGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: CERAQHLLAAGWATSRAAATACR*LHTCGS
Trigger: TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGC...TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTCTCTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp AGAGTTGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCGGCAGACGTGGAGCATaGGGGGCCGGAACGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RVGSLGRSASRKRTDVYGGRRGA*GAGTSG
Trigger: CCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCC...GCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCAGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGCTGACGTGCAGCGGCTaGCCTTGCTTAGCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: SDQRADVEHAGPERVGEMLTCSG*PCLAER
Trigger: TCGCTCTGCTAAGCAAGGGCAGCCGCTGCACGTCAG...CATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TGTGAGAGAGCCCAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCAGGAAACCGGTCAGGCTaGCCAGGACACCTGGAACCT +
Preference number: 4 (lower is better)
Translates to: CERAQHLLAAGWATSRAAGNRSG*PGHLEP
Trigger: AGGTTCCAGGTGTCCTGGGCAGCCTGACCGGTTTCC...TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTCTCTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTGCTTTCCGCTAAGCTaGTGTCTGGGAAAGTCAACC +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLCFPLS*CLGKST
Trigger: GGTTGACTTTCCCAGACAGCAGCTTAGCGGAAAGCA...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCAGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGGCAGTCTACACCCAGTaGGAGTCTCCTGAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: SDQRADVEHAGPERVGEMAVYTQ*ESPERG
Trigger: ACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGC...CATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACCAGCCCCCGTGACGCGTCTTTGGACTTaGAGACATTCCGCGAGGCTT +
Preference number: 4 (lower is better)
Translates to: QHLLAAGWATSRAAPAPVTRLWT*RHSARL
Trigger: AAGCCTCGCGGAATGTCTGCAAGTCCAAAGACGCGT...CACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTCCGGCCGCACGCGCCTaGTGGACGGCACTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASPAARA*WTALQG
Trigger: GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACTGGGCGCCGCCATGTTaGCGAGGGCGGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNWAPPC*RGRVSR
Trigger: TCTGGAGACCCGCCCTCGCCAACATGGCGGCGCCCA...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251722.10
ENST00000678225.1
CDS-3UTR CCA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGACGAACCCGCCCCAACTaGGCGCCGCCATGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRRTRPN*APPCWR
Trigger: TCGCCAACATGGCGGCGCCCAGTTGGGGCGGGTTCG...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251722.10
ENST00000678225.1
CDS-3UTR CCA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCCGAACCCGCCCCAACTaGGCGCCGCCATGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: TSMADALRHVCRSDVASVRTRPN*APPCWR
Trigger: TCGCCAACATGGCGGCGCCCAGTTGGGGCGGGTTCG...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251722.10
ENST00000678225.1
CDS-3UTR CCA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCTTTATATCAAACCAGTaGGGACAGGAGATGCTATTG +
Preference number: 4 (lower is better)
Translates to: PHAQAGPAARACWTALQGFISNQ*GQEMLL
Trigger: CAATAGCATCTCCTGTCCCCACTGGTTTGATATAAA...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTCCGGCAGTCCCACCCTaGGCCGCGTTCCACACCAGG +
Preference number: 4 (lower is better)
Translates to: HCEKPVRANESHLNTEESPAVPP*AAFHTR
Trigger: CCTGGTGTGGAACGCGGCCCAGGGTGGGACTGCCGG...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCAGCTCCCCACGTGGATaGAGAGAGAAGTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSSSPRG*REKFPG
Trigger: CCCCGGAAACTTCTCTCTCCATCCACGTGGGGAGCT...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCAGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGCTACTGGCAGCTGGGTaGGCGACATCCAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SDQRADVEHAGPERVGEMLLAAG*ATSRAA
Trigger: TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAG...CATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TGTGAGAGAGCCCAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCAACGGAGGAAAGTGGCTaGCCTGACCCCACACACCTC +
Preference number: 4 (lower is better)
Translates to: CERAQHLLAAGWATSRAATEESG*PDPTHL
Trigger: GAGGTGTGTGGGGTCAGGCCAGCCACTTTCCTCCGT...TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTCTCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCAGGACACCTGGAACCTaGGCTATGCCAGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSRTPGT*AMPGLS
Trigger: AGACAGGCCTGGCATAGCCCAGGTTCCAGGTGTCCT...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCGCTGCTAGTCAGAGTTaGGTCCTTAGGGCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSAASQS*VLRAQC
Trigger: GCACTGCGCCCTAAGGACCCAACTCTGACTAGCAGC...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TGTGAGAGAGCCCAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACAGCTTAAGAAGGGCTaGGCGCCCAGCTCGTCACGA +
Preference number: 4 (lower is better)
Translates to: CERAQHLLAAGWATSRAAQLKKG*APSSSR
Trigger: TCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTG...TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTCTCTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGCCGCACGCGCCTGCTaGACGGCACTTCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: QTSMADALRHVCRSDVASAARAC*TALQGT
Trigger: TGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGC...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCGCCGCACGCGCCTGCTaGACGGCACTTCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: TSMADALRHVCRSDVASVAARAC*TALQGT
Trigger: TGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGC...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACCAGCCCCCGTGCAGCGTGGCATCTTCTaGGATCTCTATGTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: QHLLAAGWATSRAAPAPVQRGIF*DLYVSQ
Trigger: TTGGGAGACATAGAGATCTCAGAAGATGCCACGCTG...CACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTAGGCAGGGGAGCGCCTaGCTCCAGCGGTGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: QTSMADALRHVCRSDVASRQGSA*LQRCPF
Trigger: GAAAGGACACCGCTGGAGTCAGGCGCTCCCCTGCCT...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCACCAGTGCGAGTCTCCTaGGCGGGGTTAGTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPPVRVS*AGLVFG
Trigger: CCCAAACACTAACCCCGCTCAGGAGACTCGCACTGG...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAACCAGTGCGAGTCTCCTaGGCGGGGTTAGTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: RPKGRRGACGAGTSGGNEPVRVS*AGLVFG
Trigger: CCCAAACACTAACCCCGCTCAGGAGACTCGCACTGG...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACCAGCCCCCGTGTGGCTCTCCAAACTCTaGCCCAAGACGAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: QHLLAAGWATSRAAPAPVWLSKL*PKTKYS
Trigger: ACTGTACTTCGTCTTGGGGCAGAGTTTGGAGAGCCA...CACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTGGCAGACGTGGAGCATaGGGGGCCGGAACGAGTGGG +
Preference number: 4 (lower is better)
Translates to: HCEKPVRANESHLNTEESGRRGA*GAGTSG
Trigger: CCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCC...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCATGCAGCGGCTGCCCTTaGTTAGCAGAGCGACTCACC +
Preference number: 4 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPCSGCP*LAERLT
Trigger: GGTGAGTCGCTCTGCTAAGCAAGGGCAGCCGCTGCA...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACGCCTGCGGGCTGACGTaGAGCGGCTGCCCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNACGLT*SGCPCL
Trigger: TAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGC...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGGCCTGCGGGCTGACGTaGAGCGGCTGCCCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLACGLT*SGCPCL
Trigger: TAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGC...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTATGCCAGGCCTGTCTaGCACAGCCCTGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLYARPV*HSPACP
Trigger: GGGGCAGGCAGGGCTGTGGCAGACAGGCCTGGCATA...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTCCCAGACCCCCGCCCTaGCCAAAACGCGAAGCGAAC +
Preference number: 4 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSPRPPP*PKREAN
Trigger: GTTCGCTTCGCGTTTTGGCCAGGGCGGGGGTCTGGG...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251722.10
ENST00000678225.1
CDS-3UTR CCA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAATGTCTTCCTTGGGGATaGCCGTCCAACCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: RPKGRRGACGAGTSGGNECLPWG*PSNPPH
Trigger: GTGGGGAGGGTTGGACGGCCATCCCCAAGGAAGACA...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTATAGCTGTCCGGCACTaGACAAAGAAGCTTCCCATT +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLIAVRH*TKKLPI
Trigger: AATGGGAAGCTTCTTTGTCCAGTGCCGGACAGCTAT...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCTCTGAGGTGGGCTaGGGACGGGACACCGAACTC +
Preference number: 4 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSGSEVG*GRDTEL
Trigger: GAGTTCGGTGTCCCGTCCCCAGCCCACCTCAGAGCC...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTCTGCACCAGCCCCCGTaGCTGCCACGTGTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTLHQPP*LPRVAE
Trigger: CTCTGCAACACGTGGCAGCCACGGGGGCTGGTGCAG...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACTCAGCACCAGCGCGGTaGCGCAGTGGCCTGAGACAC +
Preference number: 4 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNSAPAR*RSGLRH
Trigger: GTGTCTCAGGCCACTGCGCCACCGCGCTGGTGCTGA...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCAGACGGCTGCCCAGGACACCTaGAACCTGGGCTATGCCAGG +
Preference number: 4 (lower is better)
Translates to: WVLRAQCFTETHRRLWQTAAQDT*NLGYAR
Trigger: CCTGGCATAGCCCAGGTTCCAGGTGTCCTGGGCAGC...CGTCTGCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CAA 72 bp CCAGGCAGCCAGTCCCCATGCCCAGGAAACCCACGTTaGTGGCATCAGCCGGAGAGTTCATCGGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: PGSQSPCPGNPR*WHQPESSSGVE
Trigger: CTCTACTCCCGATGAACTCTCCGGCTGATGCCACAAACGTGGGTTTCCTGGGCATGGGGACTGGCTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
3UTR CAA 72 bp CTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTaGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LDGTSGHNPHAS*DLQTFREASGL
Trigger: GAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CACACCTCCCACAGCGGAGCAACGGCATGCCGCTGCCTCCATACCTGCGGTTCATGTTGCAGAGCTAAGTaGCTACATGCACTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HTSHSGATACRCLHTCGSCCRAK*LHALAR
Trigger: CCTGGCCAGTGCATGTAGTCACTTAGCTCTGCAACA...TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp TCAGGTGTTTTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCGGGCCGGGTGCTGTGTaGGAGAGCCCAGCACCTACT +
Preference number: 4 (lower is better)
Translates to: SGVFIEATQETGQAAQDTGPGAV*ESPAPT
Trigger: AGTAGGTGCTGGGCTCTCTCACACAGCACCCGGCCC...GGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTGGGCCGGGTGCTGTGTaGGAGAGCCCAGCACCTACT +
Preference number: 4 (lower is better)
Translates to: HCEKPVRANESHLNTEESGPGAV*ESPAPT
Trigger: AGTAGGTGCTGGGCTCTCTCACACAGCACCCGGCCC...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTCACAGGAAGAGAGGCTaGGGCGCTGTGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: VFGLADIPRGFWPLEGKAHRKRG*GAVDGS
Trigger: GCTGCCGTCCACAGCGCCTCAGCCTCTCTTCCTGTG...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATACCGTGAGGCCCAGGTaGCAAGCAGGCTCAGGACAT +
Preference number: 4 (lower is better)
Translates to: GRPARHDTYSSGVIRSLYTVRPR*QAGSGH
Trigger: ATGTCCTGAGCCTGCTTGTCACCTGGGCCTCACGGT...ATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp AGGGGGCAGAGCGACGGGAGCAATGATGAATCCGTTGGATGGCAGACTGTCCGAGGGTGGGCCTCTTGCTaGCACTTCAGGGCCATCATG +
Preference number: 4 (lower is better)
Translates to: RGQSDGSNDESVGWQTVRGWASC*HFRAIM
Trigger: CATGATGGCCCTGAAGTGTCAGCAAGAGGCCCACCC...TCGGACAGTCTGCCATCCAACGGATTCATCATTGCTCCCGTCGCTCTGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR TCA 90 bp ATCCGTTGGATGGCAGACTGTCCGAACACACTGACAACAGCTGCGGGTGGGCCTACTGTCCGAACACACTaGCAACAGCTGCGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: IRWMADCPNTLTTAAGGPTVRTH*QQLRVG
Trigger: GCCCACCCGCAGCTGTTGTCAGTGTGTTCGGACAGT...AGGCCCACCCGCAGCTGTTGTCAGTGTGTTCGGACAGTCTGCCATCCAACGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR GCA 90 bp AAAGGGAAGAAGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGTTCCGCAGTGGTCCATaGTGTTTTCTGTACTTCTTG +
Preference number: 4 (lower is better)
Translates to: KGKKAKATRTGRPGRTRLFRSGP*CFLYFL
Trigger: CAAGAAGTACAGAAAACAGCATGGACCACTGCGGAA...CAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCTTCTTCCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACCAGCCCCCGTGAGTGGGGACAGGAGATaGTATTGTTTAAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: QHLLAAGWATSRAAPAPVSGDRR*YCLNLG
Trigger: CCCCAGGTTTAAACAATAGCATCTCCTGTCCCCACT...CACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp AGGTCCTCTCACCAGGGATGCGCACCTGTGTCCTCAGCAGCACGTCCTGGGGGCTGGCTCTCCAAACTCTaGCCCAAGACGAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: RSSHQGCAPVSSAARPGGWLSKL*PKTKYS
Trigger: ACTGTACTTCGTCTTGGGGCAGAGTTTGGAGAGCCA...GCCCCCAGGACGTGCTGCTGAGGACACAGGTGCGCATCCCTGGTGAGAGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS-3UTR GCA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTGGCGACATCCAGAGCTaGACCAGCCCCCGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASGDIQS*TSPRGC
Trigger: GCAGCCACGGGGGCTGGTGCAGCTCTGGATGTCGCC...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTAGCGGAGCAACGGCATaGCGCTGCCTCCATACCTGC +
Preference number: 4 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSSGATA*RCLHTC
Trigger: GCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCT...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGACTTCTGCCCGCTTCTaGTCAGCACCAGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLTSARF*SAPARW
Trigger: CCACCGCGCTGGTGCTGAGCAGAAGCGGGCAGAAGT...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTTATGCCAGGCCTGTCTaGCACAGCCCTGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: HCEKPVRANESHLNTEESYARPV*HSPACP
Trigger: GGGGCAGGCAGGGCTGTGGCAGACAGGCCTGGCATA...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCAGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGCTCACACTTCAGTGCTaGTTCCCATCAGTGACGGGG +
Preference number: 4 (lower is better)
Translates to: SDQRADVEHAGPERVGEMLTLQC*FPSVTG
Trigger: CCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAG...CATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TGTGAGAGAGCCCAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCAGCCCTCACACTTCAGTaGTGCTTCCCATCAGTGACG +
Preference number: 4 (lower is better)
Translates to: CERAQHLLAAGWATSRAAALTLQ*CFPSVT
Trigger: CGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGC...TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTCTCTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCAGGCGTCTCTGCACTaGAGAGGATGTAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPQASLH*RGCSCS
Trigger: AGAGCAGCTACATCCTCTCCAGTGCAGAGACGCCTG...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTAGGAAGCAGAGGATTTaGGATTGGAGGCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPRKQRI*DWRRQA
Trigger: TGCCTGGCGCCTCCAATCCCAAATCCTCTGCTTCCT...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCAGGTGTTTTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCCTGCACCAGCCCCCGTaGCTGCCACGTGTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SGVFIEATQETGQAAQDTLHQPP*LPRVAE
Trigger: CTCTGCAACACGTGGCAGCCACGGGGGCTGGTGCAG...GGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACGCACCTACTGGCAGCTaGGTGGGCGACATCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNAPTGS*VGDIQS
Trigger: GCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGC...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACGAGCCCAGCACCTACTaGCAGCTGGGTGGGCGACAT +
Preference number: 4 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNEPSTY*QLGGRH
Trigger: ATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTC...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp AGAGTTGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCACCAAAGGGCAGACGTaGAGCATGCGGGGCCGGAAC +
Preference number: 4 (lower is better)
Translates to: RVGSLGRSASRKRTDVYGTKGQT*SMRGRN
Trigger: GTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGT...GCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTACCAAAGGGCAGACGTaGAGCATGCGGGGCCGGAAC +
Preference number: 4 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSTKGQT*SMRGRN
Trigger: GTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGT...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGGCACCCAGGATAAGCTaGACCCTTGGCCTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLAPRIS*TLGLRA
Trigger: AGCCCGCAGGCCAAGGGTCCAGCTTATCCTGGGTGC...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTGAGGCTGAGGCGCTGTaGACGGCAGCAGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: VFGLADIPRGFWPLEGKAEAEAL*TAAAAV
Trigger: GACTGCAGCTGCTGCCGTCCACAGCGCCTCAGCCTC...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CACACCTCCCACAGCGGAGCAACGGCATGCCGCTGCCTCCATACCTGCGGTTCAGTTAGTGTTTGGGAGTaGGAGGCAGCTGCTAGTCAG +
Preference number: 4 (lower is better)
Translates to: HTSHSGATACRCLHTCGSVSVWE*EAAASQ
Trigger: CTGACTAGCAGCTGCCTCCCACTCCCAAACACTAAC...TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTACCCACACGCGTCTTTaGACTTGCAGACATTCCGCG +
Preference number: 4 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPTHTRL*TCRHSA
Trigger: CGCGGAATGTCTGCAAGTCCAAAGACGCGTGTGGGT...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTGGTAACTGTAAAGGGATaGTTCGAACCTTTGCATCGG +
Preference number: 4 (lower is better)
Translates to: GRTRLLDGTSGHNPHASLVTVKG*FEPLHR
Trigger: CCGATGCAAAGGTTCGAATCATCCCTTTACAGTTAC...CAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAAACCCAAAGCTGTCAGTaGGGTCTGCTGTGGATGCAG +
Preference number: 4 (lower is better)
Translates to: RPKGRRGACGAGTSGGNETQSCQ*GLLWMQ
Trigger: CTGCATCCACAGCAGACCTCACTGACAGCTTTGGGT...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGGTACAGACGATAGATaGGGTCATGACCGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPGTDDR*GHDRRS
Trigger: GGACCTCCGGTCATGACCTCATCTATCGTCTGTACC...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGGATGTCCTGAGGGACCCTaGAGCTGGTACCACCAGATG +
Preference number: 4 (lower is better)
Translates to: QQLQSSGSKDLLITEHPGCPEGP*SWYHQM
Trigger: CATCTGGTGGTACCAGCTTCAGGGTCCCTCAGGACA...TCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp ATCCGTTGGATGGCAGACTGTCCGAACACACTGACAACAGCTGCGGGTGGGCCTTGTCCTGAGGGACCCTaGAGCTGGTACCACCAGATG +
Preference number: 4 (lower is better)
Translates to: IRWMADCPNTLTTAAGGPCPEGP*SWYHQM
Trigger: CATCTGGTGGTACCAGCTTCAGGGTCCCTCAGGACA...AGGCCCACCCGCAGCTGTTGTCAGTGTGTTCGGACAGTCTGCCATCCAACGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR TCA 90 bp CACACCTCCCACAGCGGAGCAACGGCATGCCGCTGCCTCCATACCTGCGGTTCACAGCGTGGCATCTTCTaGGATCTCTATGTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: HTSHSGATACRCLHTCGSQRGIF*DLYVSQ
Trigger: TTGGGAGACATAGAGATCTCAGAAGATGCCACGCTG...TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAGCTGACGAGAAACCGTaGGGCCCAGGTGACAAGCAG +
Preference number: 4 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRADEKP*GPGDKQ
Trigger: CTGCTTGTCACCTGGGCCTCACGGTTTCTCGTCAGC...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGCTGACGAGAAACCGTaGGGCCCAGGTGACAAGCAG +
Preference number: 4 (lower is better)
Translates to: QTSMADALRHVCRSDVASADEKP*GPGDKQ
Trigger: CTGCTTGTCACCTGGGCCTCACGGTTTCTCGTCAGC...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGCCAGTGCGAGTCTCCTaGGCGGGGTTAGTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWPVRVS*AGLVFG
Trigger: CCCAAACACTAACCCCGCTCAGGAGACTCGCACTGG...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTGTACGCTGAGATGAGATaGAGGCAGATGCTACAGAAA +
Preference number: 4 (lower is better)
Translates to: GRTRLLDGTSGHNPHASLYAEMR*RQMLQK
Trigger: TTTCTGTAGCATCTGCCTTCATCTCATCTCAGCGTA...CAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTGTAAATGTGAAGTCCTaGTGGTACAAGCTTTGCAAC +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLVNVKS*WYKLCN
Trigger: GTTGCAAAGCTTGTACCAGCAGGACTTCACATTTAC...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCACAGTTCGTAAAAGCCTaGCTGGGCGCTTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPQFVKA*LGASSP
Trigger: TGGAGAGGAAGCGCCCAGGCAGGCTTTTACGAACTG...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTGAGGGCCCGTTGTTTCTaGTTTTCTTTTCCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: GRTRLLDGTSGHNPHASLRARCF*FSFPVS
Trigger: TGACACTGGAAAAGAAAAGCAGAAACAACGGGCCCT...CAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACCAGCCCCCGTGAGGGCCCGTTGTTTCTaGTTTTCTTTTCCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: QHLLAAGWATSRAAPAPVRARCF*FSFPVS
Trigger: TGACACTGGAAAAGAAAAGCAGAAACAACGGGCCCT...CACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCCCGGGCAGGCGTCTCTaGACTGGAGAGGATGTAGCT +
Preference number: 4 (lower is better)
Translates to: TSMADALRHVCRSDVASVPGRRL*TGEDVA
Trigger: AGCTACATCCTCTCCAGTGCAGAGACGCCTGCCCGG...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTCCGGGCAGGCGTCTCTaGACTGGAGAGGATGTAGCT +
Preference number: 4 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTPGRRL*TGEDVA
Trigger: AGCTACATCCTCTCCAGTGCAGAGACGCCTGCCCGG...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCGGCAGCCAGTCCCCATaGCCAGGAAACCCACGTTTG +
Preference number: 4 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLGSQSP*PGNPRL
Trigger: CAAACGTGGGTTTCCTGGGCATGGGGACTGGCTGCC...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTAGCAGCTGGGGCCGGGTaGTGTGTGAGAGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLAAGAG*CVREPS
Trigger: GCTGGGCTCTCTCACACAGCACCCGGCCCCAGCTGC...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCGCAACGGCATGCCGCTaGCTCCATACCTGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: TSMADALRHVCRSDVASVATACR*LHTCGS
Trigger: TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGC...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTAGCGGAGCAACGGCATaGCGCTGCCTCCATACCTGC +
Preference number: 4 (lower is better)
Translates to: VFGLADIPRGFWPLEGKASGATA*RCLHTC
Trigger: GCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCT...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGTGCAGCGGCTGCCCTTaGTTAGCAGAGCGACTCACC +
Preference number: 4 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWCSGCP*LAERLT
Trigger: GGTGAGTCGCTCTGCTAAGCAAGGGCAGCCGCTGCA...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGGTGGACGGCAGCAGCTaGAGTCCTCGGGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGVDGSS*SPRDPR
Trigger: CCTTGGATCCCGAGGACTGCAGCTGCTGCCGTCCAC...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGTGTCTGCCACAGCCCTaGCTGCCCCGCTTCCACACA +
Preference number: 4 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGCLPQP*LPRFHT
Trigger: TGTGTGGAAGCGGGGCAGGCAGGGCTGTGGCAGACA...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTTGTCTGCCACAGCCCTaGCTGCCCCGCTTCCACACA +
Preference number: 4 (lower is better)
Translates to: HCEKPVRANESHLNTEESCLPQP*LPRFHT
Trigger: TGTGTGGAAGCGGGGCAGGCAGGGCTGTGGCAGACA...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTCTGGAACCTGGGCTATaGCAGGCCTGTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTLEPGL*QACLPQ
Trigger: CTGTGGCAGACAGGCCTGGCATAGCCCAGGTTCCAG...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGCTCTCAGACACGTGTaGAGAAGCGACGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPALRHV*RSDVAS
Trigger: AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGC...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCGCAGTCTACACCCAGTaGGAGTCTCCTGAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: TSMADALRHVCRSDVASVAVYTQ*ESPERG
Trigger: ACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGC...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTAATGTGAAGTCCTGCTaGTACAAGCTTTGCAACACT +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLNVKSC*YKLCNT
Trigger: AGTGTTGCAAAGCTTGTACCAGCAGGACTTCACATT...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTGTCTTCCTTGGGGATaGCCGTCCAACCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTCLPWG*PSNPPH
Trigger: GTGGGGAGGGTTGGACGGCCATCCCCAAGGAAGACA...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAAGCTGGTACCACCAGATaGGCACCTTCAGGAAACCCA +
Preference number: 4 (lower is better)
Translates to: RPKGRRGACGAGTSGGNEAGTTR*APSGNP
Trigger: TGGGTTTCCTGAAGGTGCCCATCTGGTGGTACCAGC...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CACCAGGGATGCGCACCTGTGTCCTCAGCAGCACGTCCTGGGGGCCCAAGTTTTTCAGCTCCGCCAGCGTaGCATCTTCTGAGATCTCTA +
Preference number: 4 (lower is better)
Translates to: HQGCAPVSSAARPGGPSFSAPPA*HLLRSL
Trigger: TAGAGATCTCAGAAGATGCCACGCTGGCGGAGCTGA...AAAACTTGGGCCCCCAGGACGTGCTGCTGAGGACACAGGTGCGCATCCCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS-3UTR CCA 90 bp AGAGCGACGGGAGCAATGATGAATCCGTTGGATGGCAGACTGTCCGAACACACTGGCTCTGAGGTGGGCTaGGGACGGGACACCGAACTC +
Preference number: 4 (lower is better)
Translates to: RATGAMMNPLDGRLSEHTGSEVG*GRDTEL
Trigger: GAGTTCGGTGTCCCGTCCCCAGCCCACCTCAGAGCC...AGTGTGTTCGGACAGTCTGCCATCCAACGGATTCATCATTGCTCCCGTCGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR CCA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTGGCTCTGAGGTGGGCTaGGGACGGGACACCGAACTC +
Preference number: 4 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASGSEVG*GRDTEL
Trigger: GAGTTCGGTGTCCCGTCCCCAGCCCACCTCAGAGCC...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCCTCAGCAGCACGTCCTaGGGGCCCAAGTTTTCGCCT +
Preference number: 4 (lower is better)
Translates to: TSMADALRHVCRSDVASVLSSTS*GPKFSP
Trigger: AGGCGAAAACTTGGGCCCCCAGGACGTGCTGCTGAG...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCCTCAGCAGCACGTCCTaGGGGCCCAAGTTTTCGCCT +
Preference number: 4 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLLSSTS*GPKFSP
Trigger: AGGCGAAAACTTGGGCCCCCAGGACGTGCTGCTGAG...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGCTCAGCAGCACGTCCTaGGGGCCCAAGTTTTCGCCT +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLLSSTS*GPKFSP
Trigger: AGGCGAAAACTTGGGCCCCCAGGACGTGCTGCTGAG...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATAGCTCCCCACGTGGATaGAGAGAGAAGTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GRPARHDTYSSGVIRSLYSSPRG*REKFPG
Trigger: CCCCGGAAACTTCTCTCTCCATCCACGTGGGGAGCT...ATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTCTACTGGCAGCTGGGTaGGCGACATCCAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTLLAAG*ATSRAA
Trigger: TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAG...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTCTACTGGCAGCTGGGTaGGCGACATCCAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: QTSMADALRHVCRSDVASLLAAG*ATSRAA
Trigger: TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAG...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGACGGAGGAAAGTGGCTaGCCTGACCCCACACACCTC +
Preference number: 4 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWTEESG*PDPTHL
Trigger: GAGGTGTGTGGGGTCAGGCCAGCCACTTTCCTCCGT...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAGGAGGCCACCCTGTGTaGCTCCTCCTCGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRGGHPV*LLLVER
Trigger: TCTTTCCACGAGGAGGAGCCACACAGGGTGGCCTCC...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTGGAGGCCACCCTGTGTaGCTCCTCCTCGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTGGHPV*LLLVER
Trigger: TCTTTCCACGAGGAGGAGCCACACAGGGTGGCCTCC...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTGCACCCAGGATAAGCTaGACCCTTGGCCTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: VFGLADIPRGFWPLEGKAAPRIS*TLGLRA
Trigger: AGCCCGCAGGCCAAGGGTCCAGCTTATCCTGGGTGC...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTCTGGGTTGGATTAAGTaGGAAAACCCTTCCTTAGTT +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLLGWIK*ENPSLV
Trigger: AACTAAGGAAGGGTTTTCCCACTTAATCCAACCCAG...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp AAAGGGAAGAAGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGGTTGGATTAAGTaGGAAAACCCTTCCTTAGTT +
Preference number: 4 (lower is better)
Translates to: KGKKAKATRTGRPGRTRLLGWIK*ENPSLV
Trigger: AACTAAGGAAGGGTTTTCCCACTTAATCCAACCCAG...CAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCTTCTTCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCATGTGCAGAAGCGACGTaGCTTCTGTCTGGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPCAEAT*LLSGRG
Trigger: ACCCCTACCAGACAGAAGCCACGTCGCTTCTGCACA...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp AGAGTTGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCCAGCTTAAGAAGGGCTaGGCGCCCAGCTCGTCACGA +
Preference number: 4 (lower is better)
Translates to: RVGSLGRSASRKRTDVYGQLKKG*APSSSR
Trigger: TCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTG...GCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTAGAATCATCAGTGGATaGTCAATCTCTTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLRIISG*SISSSL
Trigger: GAGTGAAGAAGAGATTGATCATCCACTGATGATTCT...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp TGTGAGAGAGCCCAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCATTCATCCCCGCCAAGTaGCTGGTAAATGTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: CERAQHLLAAGWATSRAAFIPAK*LVNVKS
Trigger: GGACTTCACATTTACCAGTCACTTGGCGGGGATGAA...TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTCTCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTTGTCCTGAGGGACCCTaGAGCTGGTACCACCAGATG +
Preference number: 4 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSCPEGP*SWYHQM
Trigger: CATCTGGTGGTACCAGCTTCAGGGTCCCTCAGGACA...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACCACAGGAAGAGAGGCTaGGGCGCTGTGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: VWLLLVERARTFQHRSFNHRKRG*GAVDGS
Trigger: GCTGCCGTCCACAGCGCCTCAGCCTCTCTTCCTGTG...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTGCTGACGAGAAACCGTaGGGCCCAGGTGACAAGCAG +
Preference number: 4 (lower is better)
Translates to: VFGLADIPRGFWPLEGKAADEKP*GPGDKQ
Trigger: CTGCTTGTCACCTGGGCCTCACGGTTTCTCGTCAGC...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp TTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTGGAACCTGCTGTTGGGAGGAGTATaGGGGACAAAGCAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: FIEATQETGQAAQDTWNLLLGGV*GTKQAA
Trigger: AGCGGCCTGCTTTGTCCCTCATACTCCTCCCAACAG...CAGGTTCCAGGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGCTGTTGGGAGGAGTATaGGGGACAAAGCAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLLLGGV*GTKQAA
Trigger: AGCGGCCTGCTTTGTCCCTCATACTCCTCCCAACAG...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCGACAGTGCCCACTTCTaGATTAGCTGGAAAGACATG +
Preference number: 4 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSDSAHF*ISWKDM
Trigger: CATGTCTTTCCAGCTAATGCAGAAGTGGGCACTGTC...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAACCATTTCTGAGCCCTTaGTCCCTGAACGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RPKGRRGACGAGTSGGNEPFLSP*SLNVFL
Trigger: GAGGAAGACGTTCAGGGAGCAAGGGCTCAGAAATGG...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGGACAGTTCGTAAAAGCCTaGCTGGGCGCTTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: QQLQSSGSKDLLITEHPGQFVKA*LGASSP
Trigger: TGGAGAGGAAGCGCCCAGGCAGGCTTTTACGAACTG...TCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TGTGAGAGAGCCCAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCATATTCCCTGAGTGGCTaGCGGTCAGTTCGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: CERAQHLLAAGWATSRAAYSLSG*RSVRKS
Trigger: GCTTTTACGAACTGACCGGCAGCCACTCAGGGAATA...TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTCTCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTAAATCGGCAACTCTCTaGCTCAGGGAGCCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSKSATL*LREPAV
Trigger: GACTGCCGGCTCCCTGAGGCAGAGAGTTGCCGATTT...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGCCGGGCAGGCGTCTCTaGACTGGAGAGGATGTAGCT +
Preference number: 4 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGPGRRL*TGEDVA
Trigger: AGCTACATCCTCTCCAGTGCAGAGACGCCTGCCCGG...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGCTGGGGCCGGGTaGTGTGTGAGAGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TLTALASSEASIISLCKDAAGAG*CVREPS
Trigger: GCTGGGCTCTCTCACACAGCACCCGGCCCCAGCTGC...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTCGCTGCCTCCATACCTaGGGTTCACGCACACGTTGT +
Preference number: 4 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTRCLHT*GSRTRC
Trigger: ACAACGTGTGCGTGAACCGCAGGTATGGAGGCAGCG...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCAGACGGTCCTTAGGGCGCAGTaGTTCACGGAAACGCACAGA +
Preference number: 4 (lower is better)
Translates to: WVLRAQCFTETHRRLWQTVLRAQ*FTETHR
Trigger: TCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGAC...CGTCTGCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTGCAGTCTACACCCAGTaGGAGTCTCCTGAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: HCEKPVRANESHLNTEESAVYTQ*ESPERG
Trigger: ACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGC...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTTGTCTTCCTTGGGGATaGCCGTCCAACCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: HCEKPVRANESHLNTEESCLPWG*PSNPPH
Trigger: GTGGGGAGGGTTGGACGGCCATCCCCAAGGAAGACA...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ATCCGTTGGATGGCAGACTGTCCGAACACACTGACAACAGCTGCGGGTGGGCCTGCTGGTACCACCAGATaGGCACCTTCAGGAAACCCA +
Preference number: 4 (lower is better)
Translates to: IRWMADCPNTLTTAAGGPAGTTR*APSGNP
Trigger: TGGGTTTCCTGAAGGTGCCCATCTGGTGGTACCAGC...AGGCCCACCCGCAGCTGTTGTCAGTGTGTTCGGACAGTCTGCCATCCAACGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR CCA 90 bp CAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGGAGCTGGTACCACCAGATaGGCACCTTCAGGAAACCCA +
Preference number: 4 (lower is better)
Translates to: QQLQSSGSKDLLITEHPGAGTTR*APSGNP
Trigger: TGGGTTTCCTGAAGGTGCCCATCTGGTGGTACCAGC...TCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGGAAAGGAGGCAAGGTCATaGCCTGAGACTTCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: QQLQSSGSKDLLITEHPGKEARS*PETSAP
Trigger: CGGAGCTGAAGTCTCAGGCCATGACCTTGCCTCCTT...TCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ATCCGTTGGATGGCAGACTGTCCGAACACACTGACAACAGCTGCGGGTGGGCCTAAGGAGGCAAGGTCATaGCCTGAGACTTCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: IRWMADCPNTLTTAAGGPKEARS*PETSAP
Trigger: CGGAGCTGAAGTCTCAGGCCATGACCTTGCCTCCTT...AGGCCCACCCGCAGCTGTTGTCAGTGTGTTCGGACAGTCTGCCATCCAACGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR CCA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCAGCTCCCCACGTGGATaGAGAGAGAAGTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLSSPRG*REKFPG
Trigger: CCCCGGAAACTTCTCTCTCCATCCACGTGGGGAGCT...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATAGGAAGCAGAGGATTTaGGATTGGAGGCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GRPARHDTYSSGVIRSLYRKQRI*DWRRQA
Trigger: TGCCTGGCGCCTCCAATCCCAAATCCTCTGCTTCCT...ATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTGGAACCTGAGTGACTACATGCACTaGCCAGGCCTCAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: FIEATQETGQAAQDTWNLSDYMH*PGLRGA
Trigger: GGCTCCTCTGAGGCCTGGCCAGTGCATGTAGTCACT...CAGGTTCCAGGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCAGTGACTACATGCACTaGCCAGGCCTCAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLSDYMH*PGLRGA
Trigger: GGCTCCTCTGAGGCCTGGCCAGTGCATGTAGTCACT...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTGGAACCTGAGGACACCTGGAACCTaGGCTATGCCAGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: FIEATQETGQAAQDTWNLRTPGT*AMPGLS
Trigger: AGACAGGCCTGGCATAGCCCAGGTTCCAGGTGTCCT...CAGGTTCCAGGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATACGCACAGACGTCTATaGCAGACGCTCTCAGACACG +
Preference number: 4 (lower is better)
Translates to: GRPARHDTYSSGVIRSLYTHRRL*QTLSDT
Trigger: CGTGTCTGAGAGCGTCTGCCATAGACGTCTGTGCGT...ATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCGCTGCTAGTCAGAGTTaGGTCCTTAGGGCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: TSMADALRHVCRSDVASVAASQS*VLRAQC
Trigger: GCACTGCGCCCTAAGGACCCAACTCTGACTAGCAGC...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACGCTGCTAGTCAGAGTTaGGTCCTTAGGGCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNAASQS*VLRAQC
Trigger: GCACTGCGCCCTAAGGACCCAACTCTGACTAGCAGC...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACAGCGGGGTTAGTGTTTaGGAGTGGGAGGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNSGVSV*EWEAAA
Trigger: AGCAGCTGCCTCCCACTCCCAAACACTAACCCCGCT...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCAGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGCGACACTTACAGCTCTaGCGTCATCAGAAGCCTCTA +
Preference number: 4 (lower is better)
Translates to: SDQRADVEHAGPERVGEMRHLQL*RHQKPL
Trigger: TAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCG...CATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATACCCACACGCGTCTTTaGACTTGCAGACATTCCGCG +
Preference number: 4 (lower is better)
Translates to: GRPARHDTYSSGVIRSLYTHTRL*TCRHSA
Trigger: CGCGGAATGTCTGCAAGTCCAAAGACGCGTGTGGGT...ATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTACCCAAAGCTGTCAGTaGGGTCTGCTGTGGATGCAG +
Preference number: 4 (lower is better)
Translates to: QTSMADALRHVCRSDVASTQSCQ*GLLWMQ
Trigger: CTGCATCCACAGCAGACCTCACTGACAGCTTTGGGT...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTAACCGGATACATTTTTaGCTGCTACTGTTAGATCTA +
Preference number: 4 (lower is better)
Translates to: PAARACWTALQGTTHTRLNRIHF*LLLLDL
Trigger: TAGATCTAACAGTAGCAGTCAAAAATGTATCCGGTT...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCACACACGCTTTCTGTTTaGGAGACTACTGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPHTLSV*ETTGCR
Trigger: TCTGCACCCAGTAGTCTCTCAAACAGAAAGCGTGTG...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp TCAGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGCAGTCAATACCAGTTTaGATGTGGACTCCACCAACC +
Preference number: 4 (lower is better)
Translates to: SDQRADVEHAGPERVGEMQSIPV*MWTPPT
Trigger: GGTTGGTGGAGTCCACATTCAAACTGGTATTGACTG...CATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACGGATTGCTAAGGCTGTaGGGACAGTGCCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNGLLRL*GQCPLL
Trigger: CAGAAGTGGGCACTGTCCTCACAGCCTTAGCAATCC...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAATTTCTGTCCCAGGTTaGACGTCACTCCCCATTGCA +
Preference number: 4 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPISVPG*TSLPIA
Trigger: TGCAATGGGGAGTGACGTTCAACCTGGGACAGAAAT...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTAAGTTTTCGCCTTTCTaGAGGGGCTCTAAGCAGATC +
Preference number: 4 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPKFSPF*RGSKQI
Trigger: GATCTGCTTAGAGCCCCTTCAGAAAGGCGAAAACTT...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTAAGCGGCGCGGTTATCTaGAGCTCCCCACGTGGATGG +
Preference number: 4 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLSGAVI*SSPRGW
Trigger: CCATCCACGTGGGGAGCTTCAGATAACCGCGCCGCT...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGGGCCGGGTGCTGTGTaGGAGAGCCCAGCACCTACT +
Preference number: 4 (lower is better)
Translates to: TLTALASSEASIISLCKDGPGAV*ESPAPT
Trigger: AGTAGGTGCTGGGCTCTCTCACACAGCACCCGGCCC...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp TGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCAGACGGGGGAAATGAAGTCCTaGAAGCAGACCCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: WVLRAQCFTETHRRLWQTGEMKS*KQTPLL
Trigger: CAGAAGTGGGGTCTGCTTTCAGGACTTCATTTCCCC...CGTCTGCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATAACGAGTGGGGGAAATaGAGTCCTGAAAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: GRPARHDTYSSGVIRSLYNEWGK*SPESRP
Trigger: GGGTCTGCTTTCAGGACTTCATTTCCCCCACTCGTT...ATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACAGGCAGGGGAGCGCCTaGCTCCAGCGGTGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: TLTALASSEASIISLCKDRQGSA*LQRCPF
Trigger: GAAAGGACACCGCTGGAGTCAGGCGCTCCCCTGCCT...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCTTCATTACGCTGAGATaGGATGAAGGCAGATGCTAC +
Preference number: 4 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSFITLR*DEGRCY
Trigger: GTAGCATCTGCCTTCATCTCATCTCAGCGTAATGAA...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGCTGTCAGTGAGGTCTaGTGTGGATGCAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSAVSEV*CGCSFL
Trigger: CAGGAAGCTGCATCCACAGCAGACCTCACTGACAGC...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACCAGTTCGTAAAAGCCTaGCTGGGCGCTTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNQFVKA*LGASSP
Trigger: TGGAGAGGAAGCGCCCAGGCAGGCTTTTACGAACTG...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCATATTCCCTGAGTGGCTaGCGGTCAGTTCGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPYSLSG*RSVRKS
Trigger: GCTTTTACGAACTGACCGGCAGCCACTCAGGGAATA...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTGGCAGCCAGTCCCCATaGCCAGGAAACCCACGTTTG +
Preference number: 4 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASGSQSP*PGNPRL
Trigger: CAAACGTGGGTTTCCTGGGCATGGGGACTGGCTGCC...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGGAGGAGCCGTCCCTGTaGTCAAAGGAAGCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLEEPSL*SKEAED
Trigger: ATCCTCTGCTTCCTTTGAGCACAGGGACGGCTCCTC...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCGAGGAGCCGTCCCTGTaGTCAAAGGAAGCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLEEPSL*SKEAED
Trigger: ATCCTCTGCTTCCTTTGAGCACAGGGACGGCTCCTC...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTCCGTCTTCGGGATGCTaGTTTCCGCTAAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QTSMADALRHVCRSDVASPSSGC*FPLSCC
Trigger: ACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGG...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGCCGTCTTCGGGATGCTaGTTTCCGCTAAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWPSSGC*FPLSCC
Trigger: ACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGG...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCACACCGTCTTCGGGATaGTGCTTTCCGCTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: TSMADALRHVCRSDVASVTPSSG*CFPLSC
Trigger: GCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGT...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCCTTAGGGCGCAGTaGTTCACGGAAACGCACAGA +
Preference number: 4 (lower is better)
Translates to: QTSMADALRHVCRSDVASVLRAQ*FTETHR
Trigger: TCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGAC...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCAGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGTGCTGGTCATTCCTTTaGAAATCAGACTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SDQRADVEHAGPERVGEMCWSFL*KSDSAW
Trigger: CCAGGCTGAGTCTGATTTCCAAAGGAATGACCAGCA...CATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTTCCTCATGTCTTCCTTaGGGATGGCCGTCCAACCCT +
Preference number: 4 (lower is better)
Translates to: QTSMADALRHVCRSDVASSSCLP*GWPSNP
Trigger: AGGGTTGGACGGCCATCCCCAAGGAAGACATGAGGA...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCAAGACGAAGTACAGTTaGTCTGGTCCTGATGACTCT +
Preference number: 4 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSKTKYS*SGPDDS
Trigger: AGAGTCATCAGGACCAGACCAACTGTACTTCGTCTT...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTGGAACCTGAAGGAGGCAAGGTCATaGCCTGAGACTTCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: FIEATQETGQAAQDTWNLKEARS*PETSAP
Trigger: CGGAGCTGAAGTCTCAGGCCATGACCTTGCCTCCTT...CAGGTTCCAGGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TTTCAATCTTCTCCACGGGAAGACGATAGAAATCGGCAACTCTCTGCCTCAGGGGGCTCTGAGGTGGGCTaGGGACGGGACACCGAACTC +
Preference number: 4 (lower is better)
Translates to: FQSSPREDDRNRQLSASGGSEVG*GRDTEL
Trigger: GAGTTCGGTGTCCCGTCCCCAGCCCACCTCAGAGCC...CCCTGAGGCAGAGAGTTGCCGATTTCTATCGTCTTCCCGTGGAGAAGATTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS-3UTR CCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGCAGGCGTCTCTGCACTaGAGAGGATGTAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLQASLH*RGCSCS
Trigger: AGAGCAGCTACATCCTCTCCAGTGCAGAGACGCCTG...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGCAGAGGATTTGGGATTaGAGGCGCCAGGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGQRIWD*RRQAAS
Trigger: ACTGGCTGCCTGGCGCCTCCAATCCCAAATCCTCTG...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp AGAGTTGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCAGGAAGCAGAGGATTTaGGATTGGAGGCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RVGSLGRSASRKRTDVYGRKQRI*DWRRQA
Trigger: TGCCTGGCGCCTCCAATCCCAAATCCTCTGCTTCCT...GCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTAGCACCTACTGGCAGCTaGGTGGGCGACATCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLAPTGS*VGDIQS
Trigger: GCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGC...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACGCTGCCCAGGACACCTaGAACCTGGGCTATGCCAGG +
Preference number: 4 (lower is better)
Translates to: VWLLLVERARTFQHRSFNAAQDT*NLGYAR
Trigger: CCTGGCATAGCCCAGGTTCCAGGTGTCCTGGGCAGC...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCATCAGCATCAGCTTGTTaGAAAAGGGTCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPSASAC*KRVTGR
Trigger: CCTGCCTGTGACCCTTTTCCAACAAGCTGATGCTGA...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGTGTGCAGAAGCGACGTaGCTTCTGTCTGGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLCAEAT*LLSGRG
Trigger: ACCCCTACCAGACAGAAGCCACGTCGCTTCTGCACA...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp AGAGTTGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCTGTGCAGAAGCGACGTaGCTTCTGTCTGGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: RVGSLGRSASRKRTDVYGCAEAT*LLSGRG
Trigger: ACCCCTACCAGACAGAAGCCACGTCGCTTCTGCACA...GCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGACGCACAGACGTCTATaGCAGACGCTCTCAGACACG +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLTHRRL*QTLSDT
Trigger: CGTGTCTGAGAGCGTCTGCCATAGACGTCTGTGCGT...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTGGAACCTGACCCACACGCGTCTTTaGACTTGCAGACATTCCGCG +
Preference number: 4 (lower is better)
Translates to: FIEATQETGQAAQDTWNLTHTRL*TCRHSA
Trigger: CGCGGAATGTCTGCAAGTCCAAAGACGCGTGTGGGT...CAGGTTCCAGGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp AGGGGCATAGGTCCTCTCACCAGGGATGCGCACCTGTGTCCTCAGCAGCACGTCAAGGAGGCAAGGTCATaGCCACTGAACATGGCATAT +
Preference number: 4 (lower is better)
Translates to: RGIGPLTRDAHLCPQQHVKEARS*PLNMAY
Trigger: ATATGCCATGTTCAGTGGCCATGACCTTGCCTCCTT...GACGTGCTGCTGAGGACACAGGTGCGCATCCCTGGTGAGAGGACCTATGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS-3UTR TCA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAATCTGAAGAAGGGAATTaGGGTAACAGGTTCCACCCT +
Preference number: 4 (lower is better)
Translates to: RPKGRRGACGAGTSGGNESEEGN*GNRFHP
Trigger: AGGGTGGAACCTGTTACCTCAATTCCCTTCTTCAGA...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTGGTACAGACGATAGATaGGGTCATGACCGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: HCEKPVRANESHLNTEESGTDDR*GHDRRS
Trigger: GGACCTCCGGTCATGACCTCATCTATCGTCTGTACC...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp TGTGAGAGAGCCCAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACTGGAGGAAGCATCTTaGAAATTTGCTGGTCATTCC +
Preference number: 4 (lower is better)
Translates to: CERAQHLLAAGWATSRAALEEAS*KFAGHS
Trigger: GGAATGACCAGCAAATTTTCAAGATGCTTCCTCCAG...TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTCTCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp TGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCAGACGCACACGCTTTCTGTTTaGGAGACTACTGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: WVLRAQCFTETHRRLWQTHTLSV*ETTGCR
Trigger: TCTGCACCCAGTAGTCTCTCAAACAGAAAGCGTGTG...CGTCTGCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCGGAGATTCTATCACCTaGCAACACTTTTCTCCATCA +
Preference number: 4 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSGDSIT*QHFSPS
Trigger: TGATGGAGAAAAGTGTTGTCAGGTGATAGAATCTCC...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CACACCTCCCACAGCGGAGCAACGGCATGCCGCTGCCTCCATACCTGCGGTTCAAAGACACAGTCCCAATaGACTTCCCATCTTCAATTC +
Preference number: 4 (lower is better)
Translates to: HTSHSGATACRCLHTCGSKTQSQ*TSHLQF
Trigger: GAATTGAAGATGGGAAGTTCATTGGGACTGTGTCTT...TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp ATCCGTTGGATGGCAGACTGTCCGAACACACTGACAACAGCTGCGGGTGGGCCTATTTCTGTCCCAGGTTaGACGTCACTCCCCATTGCA +
Preference number: 4 (lower is better)
Translates to: IRWMADCPNTLTTAAGGPISVPG*TSLPIA
Trigger: TGCAATGGGGAGTGACGTTCAACCTGGGACAGAAAT...AGGCCCACCCGCAGCTGTTGTCAGTGTGTTCGGACAGTCTGCCATCCAACGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR TCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTTGTTGCAGAGCTAAGTaGCTACATGCACTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QTSMADALRHVCRSDVASCCRAK*LHALAR
Trigger: CCTGGCCAGTGCATGTAGTCACTTAGCTCTGCAACA...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTCGAACGAGAGTCATCTaGACACGGAGGAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: QTSMADALRHVCRSDVASRTRVI*TRRKVA
Trigger: AGCCACTTTCCTCCGTGTTCAGATGACTCTCGTTCG...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp AGAGTTGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCGGGGAAATGAAGTCCTaGAAGCAGACCCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: RVGSLGRSASRKRTDVYGGEMKS*KQTPLL
Trigger: CAGAAGTGGGGTCTGCTTTCAGGACTTCATTTCCCC...GCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTAACGAGTGGGGGAAATaGAGTCCTGAAAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSNEWGK*SPESRP
Trigger: GGGTCTGCTTTCAGGACTTCATTTCCCCCACTCGTT...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTAACCGTGAGGCCCAGGTaGCAAGCAGGCTCAGGACAT +
Preference number: 4 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLTVRPR*QAGSGH
Trigger: ATGTCCTGAGCCTGCTTGTCACCTGGGCCTCACGGT...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCAGGTGTTTTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCGCTGTCAGTGAGGTCTaGTGTGGATGCAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SGVFIEATQETGQAAQDTAVSEV*CGCSFL
Trigger: CAGGAAGCTGCATCCACAGCAGACCTCACTGACAGC...GGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAATTTGGCCGACTTTGCTaGTTTAACCAGCCTGTCACA +
Preference number: 4 (lower is better)
Translates to: RPKGRRGACGAGTSGGNEFGRLC*FNQPVT
Trigger: TGTGACAGGCTGGTTAAAGCAGCAAAGTCGGCCAAA...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAAAGTGGGGACAGGAGATaGTATTGTTTAAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: RPKGRRGACGAGTSGGNESGDRR*YCLNLG
Trigger: CCCCAGGTTTAAACAATAGCATCTCCTGTCCCCACT...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCTGCTGGTACAAGCTTTaGAACACTAAGAACCATGTC +
Preference number: 4 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSCWYKL*NTKNHV
Trigger: GACATGGTTCTTAGTGTTGCAAAGCTTGTACCAGCA...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCCCATTTCTGAGCCCTTaGTCCCTGAACGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLPFLSP*SLNVFL
Trigger: GAGGAAGACGTTCAGGGAGCAAGGGCTCAGAAATGG...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ATCCGTTGGATGGCAGACTGTCCGAACACACTGACAACAGCTGCGGGTGGGCCTTATTCCCTGAGTGGCTaGCGGTCAGTTCGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: IRWMADCPNTLTTAAGGPYSLSG*RSVRKS
Trigger: GCTTTTACGAACTGACCGGCAGCCACTCAGGGAATA...AGGCCCACCCGCAGCTGTTGTCAGTGTGTTCGGACAGTCTGCCATCCAACGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR GCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTGGAGAGGATGTAGCTaGTCTGCTCATGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTWRGCS*SAHGGL
Trigger: AAGCCCTCCATGAGCAGAGCAGCTACATCCTCTCCA...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGTGGAGAGGATGTAGCTaGTCTGCTCATGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLWRGCS*SAHGGL
Trigger: AAGCCCTCCATGAGCAGAGCAGCTACATCCTCTCCA...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACTGGAGAGGATGTAGCTaGTCTGCTCATGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNWRGCS*SAHGGL
Trigger: AAGCCCTCCATGAGCAGAGCAGCTACATCCTCTCCA...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGTGGACGGCAGCAGCTaGAGTCCTCGGGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: TLTALASSEASIISLCKDVDGSS*SPRDPR
Trigger: CCTTGGATCCCGAGGACTGCAGCTGCTGCCGTCCAC...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTGCCCTCACACTTCAGTaGTGCTTCCCATCAGTGACG +
Preference number: 4 (lower is better)
Translates to: VFGLADIPRGFWPLEGKAALTLQ*CFPSVT
Trigger: CGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGC...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCAGGTGTTTTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCGTCCTTAGGGCGCAGTaGTTCACGGAAACGCACAGA +
Preference number: 4 (lower is better)
Translates to: SGVFIEATQETGQAAQDTVLRAQ*FTETHR
Trigger: TCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGAC...GGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCATCTATCATCTCCCTCTaGAAAGACGCAGTCTACACC +
Preference number: 4 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPSIISL*KDAVYT
Trigger: GGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGA...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGACGCGTCTTTGGACTTaGAGACATTCCGCGAGGCTT +
Preference number: 4 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWTRLWT*RHSARL
Trigger: AAGCCTCGCGGAATGTCTGCAAGTCCAAAGACGCGT...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTTTCTCTAGGAGCAGGTaGCTCCAAAGCTTTAGTCTT +
Preference number: 4 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPFSRSR*LQSFSL
Trigger: AAGACTAAAGCTTTGGAGCCACCTGCTCCTAGAGAA...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCAGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGTTCTCTAGGAGCAGGTaGCTCCAAAGCTTTAGTCTT +
Preference number: 4 (lower is better)
Translates to: SDQRADVEHAGPERVGEMFSRSR*LQSFSL
Trigger: AAGACTAAAGCTTTGGAGCCACCTGCTCCTAGAGAA...CATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CACACCTCCCACAGCGGAGCAACGGCATGCCGCTGCCTCCATACCTGCGGTTCAAATGTGAAGTCCTGCTaGTACAAGCTTTGCAACACT +
Preference number: 4 (lower is better)
Translates to: HTSHSGATACRCLHTCGSNVKSC*YKLCNT
Trigger: AGTGTTGCAAAGCTTGTACCAGCAGGACTTCACATT...TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGTCCTCATGTCTTCCTTaGGGATGGCCGTCCAACCCT +
Preference number: 4 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGSSCLP*GWPSNP
Trigger: AGGGTTGGACGGCCATCCCCAAGGAAGACATGAGGA...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGTCAGCTCCGCCAGCGTaGCATCTTCTGAGATCTCTA +
Preference number: 4 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWSAPPA*HLLRSL
Trigger: TAGAGATCTCAGAAGATGCCACGCTGGCGGAGCTGA...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp AGAGTTGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCTCATGGAGGGCTTCTTaGCTTTTCCTTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RVGSLGRSASRKRTDVYGSWRAS*LFLLPR
Trigger: CCTGGGGAGAAGGAAAAGCCAAGAAGCCCTCCATGA...GCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp AGAGTTGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCTGTGGCTCCTCCTCGTaGAAAGAGCTCGCACTTTTC +
Preference number: 4 (lower is better)
Translates to: RVGSLGRSASRKRTDVYGCGSSS*KELALF
Trigger: GAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACA...GCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTTGTGGCTCCTCCTCGTaGAAAGAGCTCGCACTTTTC +
Preference number: 4 (lower is better)
Translates to: QTSMADALRHVCRSDVASCGSSS*KELALF
Trigger: GAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACA...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGACGCACAGACGTCTATaGCAGACGCTCTCAGACACG +
Preference number: 4 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGTHRRL*QTLSDT
Trigger: CGTGTCTGAGAGCGTCTGCCATAGACGTCTGTGCGT...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTGGAACCTGGTTAGTGTTTGGGAGTaGGAGGCAGCTGCTAGTCAG +
Preference number: 4 (lower is better)
Translates to: FIEATQETGQAAQDTWNLVSVWE*EAAASQ
Trigger: CTGACTAGCAGCTGCCTCCCACTCCCAAACACTAAC...CAGGTTCCAGGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCAGGTGTTTTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCATTCCGCGAGGCTTCTaGCCTCTCGAAGGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: SGVFIEATQETGQAAQDTIPRGF*PLEGKA
Trigger: AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAAT...GGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ATCCGTTGGATGGCAGACTGTCCGAACACACTGACAACAGCTGCGGGTGGGCCTGATGAATCCGTTGGATaGCAGACTGTCCGAACACAC +
Preference number: 4 (lower is better)
Translates to: IRWMADCPNTLTTAAGGPDESVG*QTVRTH
Trigger: GTGTGTTCGGACAGTCTGCCATCCAACGGATTCATC...AGGCCCACCCGCAGCTGTTGTCAGTGTGTTCGGACAGTCTGCCATCCAACGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR TCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGTAACTGTAAAGGGATaGTTCGAACCTTTGCATCGG +
Preference number: 4 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPVTVKG*FEPLHR
Trigger: CCGATGCAAAGGTTCGAATCATCCCTTTACAGTTAC...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCACTGGAGGAAGCATCTTaGAAATTTGCTGGTCATTCC +
Preference number: 4 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPLEEAS*KFAGHS
Trigger: GGAATGACCAGCAAATTTTCAAGATGCTTCCTCCAG...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGGGTGCAGAGCCCCATTaGAGAAATGATACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGGAEPH*RNDTEG
Trigger: GCCCTCAGTATCATTTCTTCAATGGGGCTCTGCACC...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CACACCTCCCACAGCGGAGCAACGGCATGCCGCTGCCTCCATACCTGCGGTTCACAAAATTCTAACAGCTaGAATATTGACTGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: HTSHSGATACRCLHTCGSQNSNS*NIDCRR
Trigger: TCTCCGGCAGTCAATATTTCAGCTGTTAGAATTTTG...TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGTTCATCCCCGCCAAGTaGCTGGTAAATGTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWFIPAK*LVNVKS
Trigger: GGACTTCACATTTACCAGTCACTTGGCGGGGATGAA...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCATTTCTGTCCCAGGTTaGACGTCACTCCCCATTGCA +
Preference number: 4 (lower is better)
Translates to: TSMADALRHVCRSDVASVISVPG*TSLPIA
Trigger: TGCAATGGGGAGTGACGTTCAACCTGGGACAGAAAT...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp ATCCGTTGGATGGCAGACTGTCCGAACACACTGACAACAGCTGCGGGTGGGCCTAAGTTTTCGCCTTTCTaGAGGGGCTCTAAGCAGATC +
Preference number: 4 (lower is better)
Translates to: IRWMADCPNTLTTAAGGPKFSPF*RGSKQI
Trigger: GATCTGCTTAGAGCCCCTTCAGAAAGGCGAAAACTT...AGGCCCACCCGCAGCTGTTGTCAGTGTGTTCGGACAGTCTGCCATCCAACGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR TCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTCGAACGAGAGTCATCTaGACACGGAGGAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: HCEKPVRANESHLNTEESRTRVI*TRRKVA
Trigger: AGCCACTTTCCTCCGTGTTCAGATGACTCTCGTTCG...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTGATCCAAGGACCTTCTaGTCACAGAGCACCCAGGAT +
Preference number: 4 (lower is better)
Translates to: VFGLADIPRGFWPLEGKADPRTF*SQSTQD
Trigger: ATCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATC...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTTCCTGCACATCATGTTaGCTCATTTCCTCATTACTG +
Preference number: 4 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPSCTSC*LISSLL
Trigger: CAGTAATGAGGAAATGAGGCAACATGATGTGCAGGA...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCATTCGATTCAGTTCCTaGACATCATGTTGCCTCATT +
Preference number: 4 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSIRFSS*TSCCLI
Trigger: AATGAGGCAACATGATGTGCAGGAACTGAATCGAAT...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCAGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGTCTGCCCTTTTGGTTTaGAGTTCAATGTTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SDQRADVEHAGPERVGEMSALLV*SSMLAA
Trigger: TGCAGCTAACATTGAACTGCAAACCAAAAGGGCAGA...CATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TGTGAGAGAGCCCAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCAGTAAATGTGAAGTCCTaGTGGTACAAGCTTTGCAAC +
Preference number: 4 (lower is better)
Translates to: CERAQHLLAAGWATSRAAVNVKS*WYKLCN
Trigger: GTTGCAAAGCTTGTACCAGCAGGACTTCACATTTAC...TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTCTCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTCCATTTCTGAGCCCTTaGTCCCTGAACGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: VFGLADIPRGFWPLEGKAPFLSP*SLNVFL
Trigger: GAGGAAGACGTTCAGGGAGCAAGGGCTCAGAAATGG...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GGGCAGAGCGACGGGAGCAATGATGAATCCGTTGGATGGCAGACTGTCCGAACATGGCTCTCCAAACTCTaGCCCAAGACGAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: GQSDGSNDESVGWQTVRTWLSKL*PKTKYS
Trigger: ACTGTACTTCGTCTTGGGGCAGAGTTTGGAGAGCCA...TGTTCGGACAGTCTGCCATCCAACGGATTCATCATTGCTCCCGTCGCTCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR GCA 90 bp AGAGCGACGGGAGCAATGATGAATCCGTTGGATGGCAGACTGTCCGAACACACTCAGTTCGTAAAAGCCTaGCTGGGCGCTTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RATGAMMNPLDGRLSEHTQFVKA*LGASSP
Trigger: TGGAGAGGAAGCGCCCAGGCAGGCTTTTACGAACTG...AGTGTGTTCGGACAGTCTGCCATCCAACGGATTCATCATTGCTCCCGTCGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR GCA 90 bp CCACACCAGGTCCAGGGCAGGGGCATAGGTCCTCTCACCAGGGATGCGCACCTGTTTCAAGTAATACGGTaGCCCTTGCAAATAATCTTG +
Preference number: 4 (lower is better)
Translates to: PHQVQGRGIGPLTRDAHLFQVIR*PLQIIL
Trigger: CAAGATTATTTGCAAGGGGCACCGTATTACTTGAAA...CAGGTGCGCATCCCTGGTGAGAGGACCTATGCCCCTGCCCTGGACCTGGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS-3UTR GCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGGAAACCGGTCAGGCTaGCCAGGACACCTGGAACCT +
Preference number: 4 (lower is better)
Translates to: TLTALASSEASIISLCKDGNRSG*PGHLEP
Trigger: AGGTTCCAGGTGTCCTGGGCAGCCTGACCGGTTTCC...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTGCTCTCAGACACGTGTaGAGAAGCGACGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASALRHV*RSDVAS
Trigger: AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGC...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTACGCGTCTTTGGACTTaGAGACATTCCGCGAGGCTT +
Preference number: 4 (lower is better)
Translates to: VFGLADIPRGFWPLEGKATRLWT*RHSARL
Trigger: AAGCCTCGCGGAATGTCTGCAAGTCCAAAGACGCGT...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAATCATTTCCTCATTACTaGTCCACCCAAAGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: RPKGRRGACGAGTSGGNESFPHY*STQSCQ
Trigger: CTGACAGCTTTGGGTGGACCAGTAATGAGGAAATGA...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATTGGAACCCCATATCTTaGATTAGCTCGAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GRPARHDTYSSGVIRSLYWNPIS*ISSSFR
Trigger: CCTGAAGCTCGAGCTAATCCAAGATATGGGGTTCCA...ATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCAGACGTGTTTGAGAGACTACTaGGTGCAGAGCCCCATTGAA +
Preference number: 4 (lower is better)
Translates to: WVLRAQCFTETHRRLWQTCLRDY*VQSPIE
Trigger: TTCAATGGGGCTCTGCACCCAGTAGTCTCTCAAACA...CGTCTGCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCACTTCTGCATTAGCTaGAAAGACATGTGGAGATTC +
Preference number: 4 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPHFCIS*KDMWRF
Trigger: GAATCTCCACATGTCTTTCCAGCTAATGCAGAAGTG...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTGCTGGTACCACCAGATaGGCACCTTCAGGAAACCCA +
Preference number: 4 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASAGTTR*APSGNP
Trigger: TGGGTTTCCTGAAGGTGCCCATCTGGTGGTACCAGC...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAAAGACGAAGTACAGTTaGTCTGGTCCTGATGACTCT +
Preference number: 4 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPKTKYS*SGPDDS
Trigger: AGAGTCATCAGGACCAGACCAACTGTACTTCGTCTT...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCAGGTGTTTTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTCAGCTCCGCCAGCGTaGCATCTTCTGAGATCTCTA +
Preference number: 4 (lower is better)
Translates to: SGVFIEATQETGQAAQDTSAPPA*HLLRSL
Trigger: TAGAGATCTCAGAAGATGCCACGCTGGCGGAGCTGA...GGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TTCAATCTTCTCCACGGGAAGACGATAGAAATCGGCAACTCTCTGCCTCAGGGACTCAGCAGCACGTCCTaGGGGCCCAAGTTTTCGCCT +
Preference number: 4 (lower is better)
Translates to: FNLLHGKTIEIGNSLPQGLSSTS*GPKFSP
Trigger: AGGCGAAAACTTGGGCCCCCAGGACGTGCTGCTGAG...TCCCTGAGGCAGAGAGTTGCCGATTTCTATCGTCTTCCCGTGGAGAAGATTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS-3UTR CCA 90 bp GGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTGTTTCGGGAAAGTATTTaGCAATTTCAATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GRTRLLDGTSGHNPHASLFRESI*QFQSSP
Trigger: TGGAGAAGATTGAAATTGCCAAATACTTTCCCGAAA...CAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTTCATGGAGGGCTTCTTaGCTTTTCCTTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VFGLADIPRGFWPLEGKASWRAS*LFLLPR
Trigger: CCTGGGGAGAAGGAAAAGCCAAGAAGCCCTCCATGA...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGGGAAACCCACGTTTGTaGCATCAGCCGGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGGNPRL*HQPESS
Trigger: TGAACTCTCCGGCTGATGCCACAAACGTGGGTTTCC...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTTGTGGCTCCTCCTCGTaGAAAGAGCTCGCACTTTTC +
Preference number: 4 (lower is better)
Translates to: HCEKPVRANESHLNTEESCGSSS*KELALF
Trigger: GAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACA...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACAGGACACCTGGAACCTaGGCTATGCCAGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: VWLLLVERARTFQHRSFNRTPGT*AMPGLS
Trigger: AGACAGGCCTGGCATAGCCCAGGTTCCAGGTGTCCT...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACTCAGCATCAGCTTGTTaGAAAAGGGTCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNSASAC*KRVTGR
Trigger: CCTGCCTGTGACCCTTTTCCAACAAGCTGATGCTGA...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACAGGGGTTTGGACTGTTaGGAGGAGTATGAGGGACAA +
Preference number: 4 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNRGLDC*EEYEGQ
Trigger: TTGTCCCTCATACTCCTCCCAACAGTCCAAACCCCT...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGTGTCTGGTAGGGGTTTaGACTGTTGGGAGGAGTATG +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLCLVGV*TVGRSM
Trigger: CATACTCCTCCCAACAGTCCAAACCCCTACCAGACA...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGGTTAGTGTTTGGGAGTaGGAGGCAGCTGCTAGTCAG +
Preference number: 4 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGVSVWE*EAAASQ
Trigger: CTGACTAGCAGCTGCCTCCCACTCCCAAACACTAAC...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTCGACACTTACAGCTCTaGCGTCATCAGAAGCCTCTA +
Preference number: 4 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTRHLQL*RHQKPL
Trigger: TAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCG...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACACCCAAAGCTGTCAGTaGGGTCTGCTGTGGATGCAG +
Preference number: 4 (lower is better)
Translates to: VWLLLVERARTFQHRSFNTQSCQ*GLLWMQ
Trigger: CTGCATCCACAGCAGACCTCACTGACAGCTTTGGGT...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAAAAGTTTCCAAAGCGCTaGAGAGGATTCGATTCAGTT +
Preference number: 4 (lower is better)
Translates to: RPKGRRGACGAGTSGGNEKFPKR*RGFDSV
Trigger: AACTGAATCGAATCCTCTTCAGCGCTTTGGAAACTT...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTGCACTTTCTTTACCCTaGAATTGCTGTTCAATATCC +
Preference number: 4 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPALSLP*NCCSIS
Trigger: GGATATTGAACAGCAATTTCAGGGTAAAGAAAGTGC...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTGGTGCAGAGCCCCATTaGAGAAATGATACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASGAEPH*RNDTEG
Trigger: GCCCTCAGTATCATTTCTTCAATGGGGCTCTGCACC...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTCACACGCTTTCTGTTTaGGAGACTACTGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: HCEKPVRANESHLNTEESHTLSV*ETTGCR
Trigger: TCTGCACCCAGTAGTCTCTCAAACAGAAAGCGTGTG...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCAAAATTCTAACAGCTaGAATATTGACTGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPQNSNS*NIDCRR
Trigger: TCTCCGGCAGTCAATATTTCAGCTGTTAGAATTTTG...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCCAGTCAATACCAGTTTaGATGTGGACTCCACCAACC +
Preference number: 4 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLQSIPV*MWTPPT
Trigger: GGTTGGTGGAGTCCACATTCAAACTGGTATTGACTG...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACGGATTGCTAAGGCTGTaGGGACAGTGCCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: VWLLLVERARTFQHRSFNGLLRL*GQCPLL
Trigger: CAGAAGTGGGCACTGTCCTCACAGCCTTAGCAATCC...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTATTTCTGTCCCAGGTTaGACGTCACTCCCCATTGCA +
Preference number: 4 (lower is better)
Translates to: HCEKPVRANESHLNTEESISVPG*TSLPIA
Trigger: TGCAATGGGGAGTGACGTTCAACCTGGGACAGAAAT...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTAAGTTTTCGCCTTTCTaGAGGGGCTCTAAGCAGATC +
Preference number: 4 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTKFSPF*RGSKQI
Trigger: GATCTGCTTAGAGCCCCTTCAGAAAGGCGAAAACTT...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTCTCAGGTGTTTTCATTaGGGCTACTCAGGAAACCGG +
Preference number: 4 (lower is better)
Translates to: VFGLADIPRGFWPLEGKALRCFH*GYSGNR
Trigger: CCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGAG...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTCTCAGGTGTTTTCATTaGGGCTACTCAGGAAACCGG +
Preference number: 4 (lower is better)
Translates to: HCEKPVRANESHLNTEESLRCFH*GYSGNR
Trigger: CCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGAG...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp AGGGGCATAGGTCCTCTCACCAGGGATGCGCACCTGTGTCCTCAGCAGCACGTCACTGAACATGGCATATaGCAAATGCCATATCAGAAC +
Preference number: 4 (lower is better)
Translates to: RGIGPLTRDAHLCPQQHVTEHGI*QMPYQN
Trigger: GTTCTGATATGGCATTTGTCATATGCCATGTTCAGT...GACGTGCTGCTGAGGACACAGGTGCGCATCCCTGGTGAGAGGACCTATGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS-3UTR TCA 90 bp CACCTGTGTCCTCAGCAGCACGTCCTGGGGGCCCAAGTTTTCGCCTTTCTGAAGCAAGGTCATGGCCACTaGACATGGCATATGACAAAT +
Preference number: 4 (lower is better)
Translates to: HLCPQQHVLGAQVFAFLKQGHGH*TWHMTN
Trigger: ATTTGTCATATGCCATGTTCAGTGGCCATGACCTTG...CTTCAGAAAGGCGAAAACTTGGGCCCCCAGGACGTGCTGCTGAGGACACAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS-3UTR GCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTTTTGGCCGACTTTGCTaGTTTAACCAGCCTGTCACA +
Preference number: 4 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSFGRLC*FNQPVT
Trigger: TGTGACAGGCTGGTTAAAGCAGCAAAGTCGGCCAAA...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAATGCTGGTACAAGCTTTaGAACACTAAGAACCATGTC +
Preference number: 4 (lower is better)
Translates to: RPKGRRGACGAGTSGGNECWYKL*NTKNHV
Trigger: GACATGGTTCTTAGTGTTGCAAAGCTTGTACCAGCA...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGACAGTGCCCACTTCTaGATTAGCTGGAAAGACATG +
Preference number: 4 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSDSAHF*ISWKDM
Trigger: CATGTCTTTCCAGCTAATGCAGAAGTGGGCACTGTC...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGTATTCCCTGAGTGGCTaGCGGTCAGTTCGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGYSLSG*RSVRKS
Trigger: GCTTTTACGAACTGACCGGCAGCCACTCAGGGAATA...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TTCAATCTTCTCCACGGGAAGACGATAGAAATCGGCAACTCTCTGCCTCAGGGAAAATCGGCAACTCTCTaGCTCAGGGAGCCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: FNLLHGKTIEIGNSLPQGKSATL*LREPAV
Trigger: GACTGCCGGCTCCCTGAGGCAGAGAGTTGCCGATTT...TCCCTGAGGCAGAGAGTTGCCGATTTCTATCGTCTTCCCGTGGAGAAGATTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS-3UTR GCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTTGCTTTCCGCTAAGCTaGTGTCTGGGAAAGTCAACC +
Preference number: 4 (lower is better)
Translates to: HCEKPVRANESHLNTEESCFPLS*CLGKST
Trigger: GGTTGACTTTCCCAGACAGCAGCTTAGCGGAAAGCA...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTTGCTTTCCGCTAAGCTaGTGTCTGGGAAAGTCAACC +
Preference number: 4 (lower is better)
Translates to: VFGLADIPRGFWPLEGKACFPLS*CLGKST
Trigger: GGTTGACTTTCCCAGACAGCAGCTTAGCGGAAAGCA...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACCCGTCTTCGGGATGCTaGTTTCCGCTAAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VWLLLVERARTFQHRSFNPSSGC*FPLSCC
Trigger: ACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGG...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACACACCGTCTTCGGGATaGTGCTTTCCGCTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VWLLLVERARTFQHRSFNTPSSG*CFPLSC
Trigger: GCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGT...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTAGCCCTCACACTTCAGTaGTGCTTCCCATCAGTGACG +
Preference number: 4 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLALTLQ*CFPSVT
Trigger: CGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGC...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTTGCTGGTCATTCCTTTaGAAATCAGACTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSCWSFL*KSDSAW
Trigger: CCAGGCTGAGTCTGATTTCCAAAGGAATGACCAGCA...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TGTGAGAGAGCCCAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCATTTATATCAAACCAGTaGGGACAGGAGATGCTATTG +
Preference number: 4 (lower is better)
Translates to: CERAQHLLAAGWATSRAAFISNQ*GQEMLL
Trigger: CAATAGCATCTCCTGTCCCCACTGGTTTGATATAAA...TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTCTCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTTGGAACCCCATATCTTaGATTAGCTCGAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: QTSMADALRHVCRSDVASWNPIS*ISSSFR
Trigger: CCTGAAGCTCGAGCTAATCCAAGATATGGGGTTCCA...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTGTTTGAGAGACTACTaGGTGCAGAGCCCCATTGAA +
Preference number: 4 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTCLRDY*VQSPIE
Trigger: TTCAATGGGGCTCTGCACCCAGTAGTCTCTCAAACA...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGTTTGAGAGACTACTaGGTGCAGAGCCCCATTGAA +
Preference number: 4 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLCLRDY*VQSPIE
Trigger: TTCAATGGGGCTCTGCACCCAGTAGTCTCTCAAACA...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAATAGCTGTCCGGCACTaGACAAAGAAGCTTCCCATT +
Preference number: 4 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRIAVRH*TKKLPI
Trigger: AATGGGAAGCTTCTTTGTCCAGTGCCGGACAGCTAT...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACATAGCTGTCCGGCACTaGACAAAGAAGCTTCCCATT +
Preference number: 4 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNIAVRH*TKKLPI
Trigger: AATGGGAAGCTTCTTTGTCCAGTGCCGGACAGCTAT...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTAGGGGTTTGGACTGTTaGGAGGAGTATGAGGGACAA +
Preference number: 4 (lower is better)
Translates to: VFGLADIPRGFWPLEGKARGLDC*EEYEGQ
Trigger: TTGTCCCTCATACTCCTCCCAACAGTCCAAACCCCT...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACAGCGGGGTTAGTGTTTaGGAGTGGGAGGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TLTALASSEASIISLCKDSGVSV*EWEAAA
Trigger: AGCAGCTGCCTCCCACTCCCAAACACTAACCCCGCT...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCGTAACTGTAAAGGGATaGTTCGAACCTTTGCATCGG +
Preference number: 4 (lower is better)
Translates to: TSMADALRHVCRSDVASVVTVKG*FEPLHR
Trigger: CCGATGCAAAGGTTCGAATCATCCCTTTACAGTTAC...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTAGGTGCAGAGCCCCATTaGAGAAATGATACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLGAEPH*RNDTEG
Trigger: GCCCTCAGTATCATTTCTTCAATGGGGCTCTGCACC...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTCAGTCAATACCAGTTTaGATGTGGACTCCACCAACC +
Preference number: 4 (lower is better)
Translates to: HCEKPVRANESHLNTEESQSIPV*MWTPPT
Trigger: GGTTGGTGGAGTCCACATTCAAACTGGTATTGACTG...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp AGAGCGACGGGAGCAATGATGAATCCGTTGGATGGCAGACTGTCCGAACACACTCAGCGTGGCATCTTCTaGGATCTCTATGTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: RATGAMMNPLDGRLSEHTQRGIF*DLYVSQ
Trigger: TTGGGAGACATAGAGATCTCAGAAGATGCCACGCTG...AGTGTGTTCGGACAGTCTGCCATCCAACGGATTCATCATTGCTCCCGTCGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR TCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTAAGTTTTCGCCTTTCTaGAGGGGCTCTAAGCAGATC +
Preference number: 4 (lower is better)
Translates to: HCEKPVRANESHLNTEESKFSPF*RGSKQI
Trigger: GATCTGCTTAGAGCCCCTTCAGAAAGGCGAAAACTT...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGTTCATTACGCTGAGATaGGATGAAGGCAGATGCTAC +
Preference number: 4 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWFITLR*DEGRCY
Trigger: GTAGCATCTGCCTTCATCTCATCTCAGCGTAATGAA...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGATGATTCGAACCTTTaGATCGGGTTTATCCTTATC +
Preference number: 4 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPDDSNL*IGFILI
Trigger: GATAAGGATAAACCCGATGCAAAGGTTCGAATCATC...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCAGGTGTTTTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTTTGGCCGACTTTGCTaGTTTAACCAGCCTGTCACA +
Preference number: 4 (lower is better)
Translates to: SGVFIEATQETGQAAQDTFGRLC*FNQPVT
Trigger: TGTGACAGGCTGGTTAAAGCAGCAAAGTCGGCCAAA...GGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTTCCGCAGTGGTCCATaGTGTTTTCTGTACTTCTTG +
Preference number: 4 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLFRSGP*CFLYFL
Trigger: CAAGAAGTACAGAAAACAGCATGGACCACTGCGGAA...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATTCTGCCCTTTTGGTTTaGAGTTCAATGTTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GRPARHDTYSSGVIRSLYSALLV*SSMLAA
Trigger: TGCAGCTAACATTGAACTGCAAACCAAAAGGGCAGA...ATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTTCCCATCTTCAATTCTaGTTCCTTCAAAGTATAGCT +
Preference number: 4 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPSHLQF*FLQSIA
Trigger: AGCTATACTTTGAAGGAAGCAGAATTGAAGATGGGA...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ATCCGTTGGATGGCAGACTGTCCGAACACACTGACAACAGCTGCGGGTGGGCCTTCCATTTTTCGTAAATaGCAGGCATCTCCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: IRWMADCPNTLTTAAGGPSIFRK*QASPCR
Trigger: CCTACAAGGAGATGCCTGGCATTTACGAAAAATGGA...AGGCCCACCCGCAGCTGTTGTCAGTGTGTTCGGACAGTCTGCCATCCAACGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR GCA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTTGGCTCTCCAAACTCTaGCCCAAGACGAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASWLSKL*PKTKYS
Trigger: ACTGTACTTCGTCTTGGGGCAGAGTTTGGAGAGCCA...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGAGGGCCCGTTGTTTCTaGTTTTCTTTTCCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLRARCF*FSFPVS
Trigger: TGACACTGGAAAAGAAAAGCAGAAACAACGGGCCCT...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGTCTATCATCTCCCTCTaGAAAGACGCAGTCTACACC +
Preference number: 4 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGSIISL*KDAVYT
Trigger: GGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGA...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTCATTTCCTCATTACTaGTCCACCCAAAGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLSFPHY*STQSCQ
Trigger: CTGACAGCTTTGGGTGGACCAGTAATGAGGAAATGA...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTTCATTTCCTCATTACTaGTCCACCCAAAGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: QTSMADALRHVCRSDVASSFPHY*STQSCQ
Trigger: CTGACAGCTTTGGGTGGACCAGTAATGAGGAAATGA...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGGAAATGTGAAGTCCTGCTaGTACAAGCTTTGCAACACT +
Preference number: 4 (lower is better)
Translates to: QQLQSSGSKDLLITEHPGNVKSC*YKLCNT
Trigger: AGTGTTGCAAAGCTTGTACCAGCAGGACTTCACATT...TCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GGAGCAATGATGAATCCGTTGGATGGCAGACTGTCCGAACACACTGACAACAGCTCAGCTCCGCCAGCGTaGCATCTTCTGAGATCTCTA +
Preference number: 4 (lower is better)
Translates to: GAMMNPLDGRLSEHTDNSSAPPA*HLLRSL
Trigger: TAGAGATCTCAGAAGATGCCACGCTGGCGGAGCTGA...GCTGTTGTCAGTGTGTTCGGACAGTCTGCCATCCAACGGATTCATCATTGCTCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR CCA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACTCAGCTCCGCCAGCGTaGCATCTTCTGAGATCTCTA +
Preference number: 4 (lower is better)
Translates to: VWLLLVERARTFQHRSFNSAPPA*HLLRSL
Trigger: TAGAGATCTCAGAAGATGCCACGCTGGCGGAGCTGA...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTATCATGGAGGGCTTCTTaGCTTTTCCTTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLSWRAS*LFLLPR
Trigger: CCTGGGGAGAAGGAAAAGCCAAGAAGCCCTCCATGA...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACGGAAACCCACGTTTGTaGCATCAGCCGGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: VWLLLVERARTFQHRSFNGNPRL*HQPESS
Trigger: TGAACTCTCCGGCTGATGCCACAAACGTGGGTTTCC...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACATTCCGCGAGGCTTCTaGCCTCTCGAAGGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: TLTALASSEASIISLCKDIPRGF*PLEGKA
Trigger: AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAAT...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAATTCCCTTTTCCATACTaGTTATTAGACACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: RPKGRRGACGAGTSGGNEFPFPY*LLDTVE
Trigger: TTCCACTGTGTCTAATAATCAGTATGGAAAAGGGAA...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp TTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTGGAACCTGAAGTTTCCAAAGCGCTaGAGAGGATTCGATTCAGTT +
Preference number: 4 (lower is better)
Translates to: FIEATQETGQAAQDTWNLKFPKR*RGFDSV
Trigger: AACTGAATCGAATCCTCTTCAGCGCTTTGGAAACTT...CAGGTTCCAGGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGAAGTTTCCAAAGCGCTaGAGAGGATTCGATTCAGTT +
Preference number: 4 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWKFPKR*RGFDSV
Trigger: AACTGAATCGAATCCTCTTCAGCGCTTTGGAAACTT...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGAGTTTCTGGCCCAGCTaGTCAACAGGAATTAGATTA +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLSFWPS*STGIRL
Trigger: TAATCTAATTCCTGTTGATCAGCTGGGCCAGAAACT...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGAAGACACAGTCCCAATaGACTTCCCATCTTCAATTC +
Preference number: 4 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWKTQSQ*TSHLQF
Trigger: GAATTGAAGATGGGAAGTTCATTGGGACTGTGTCTT...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp ATCCGTTGGATGGCAGACTGTCCGAACACACTGACAACAGCTGCGGGTGGGCCTAAAAACAGGAACAACTaGGACGAACTTGGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: IRWMADCPNTLTTAAGGPKNRNN*DELGAF
Trigger: AAAAGCACCAAGTTCGTCTCAGTTGTTCCTGTTTTT...AGGCCCACCCGCAGCTGTTGTCAGTGTGTTCGGACAGTCTGCCATCCAACGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR TCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGATCCAAGGACCTTCTaGTCACAGAGCACCCAGGAT +
Preference number: 4 (lower is better)
Translates to: TLTALASSEASIISLCKDDPRTF*SQSTQD
Trigger: ATCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATC...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp TCAGGTGTTTTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTACGCTGAGATGAGATaGAGGCAGATGCTACAGAAA +
Preference number: 4 (lower is better)
Translates to: SGVFIEATQETGQAAQDTYAEMR*RQMLQK
Trigger: TTTCTGTAGCATCTGCCTTCATCTCATCTCAGCGTA...GGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAAATATTTCATTACGCTaGGATGAGATGAAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPNISLR*DEMKAD
Trigger: ATCTGCCTTCATCTCATCTCAGCGTAATGAAATATT...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp TTTGTACAAGGGCAACAGAACTCACTGATAGTGACTTCTGCCCATCGTGATGTGGACTTCTGCCCATCGTaGTGTGTGCGGCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: FVQGQQNSLIVTSAHRDVDFCPS*CVRLSA
Trigger: AGCACTCAGCCGCACACATCACGATGGGCAGAAGTC...CACATCACGATGGGCAGAAGTCACTATCAGTGAGTTCTGTTGCCCTTGTACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR GCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTTGCAGAATCACATTCTaGCCTTTTGGTTTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: QTSMADALRHVCRSDVASCRITF*PFGLQF
Trigger: GAACTGCAAACCAAAAGGGCAGAATGTGATTCTGCA...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGATGCAGAATCACATTCTaGCCTTTTGGTTTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRCRITF*PFGLQF
Trigger: GAACTGCAAACCAAAAGGGCAGAATGTGATTCTGCA...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TGTGAGAGAGCCCAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCATTCAAAAGTATTGTTTaGAGAATCACATTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: CERAQHLLAAGWATSRAAFKSIV*RITFCP
Trigger: AGGGCAGAATGTGATTCTGCAAACAATACTTTTGAA...TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTCTCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGTGCTGGTACAAGCTTTaGAACACTAAGAACCATGTC +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLCWYKL*NTKNHV
Trigger: GACATGGTTCTTAGTGTTGCAAAGCTTGTACCAGCA...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTCCATTTTTCGTAAATaGCAGGCATCTCCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTSIFRK*QASPCR
Trigger: CCTACAAGGAGATGCCTGGCATTTACGAAAAATGGA...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTCCATTTTTCGTAAATaGCAGGCATCTCCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLSIFRK*QASPCR
Trigger: CCTACAAGGAGATGCCTGGCATTTACGAAAAATGGA...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTTGCTGGTCATTCCTTTaGAAATCAGACTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASCWSFL*KSDSAW
Trigger: CCAGGCTGAGTCTGATTTCCAAAGGAATGACCAGCA...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAATCCTTTTCCCTGATTaGCTGGACTTTAGAATCATT +
Preference number: 4 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPILFPD*LDFRII
Trigger: AATGATTCTAAAGTCCAGCCAATCAGGGAAAAGGAT...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTGGAACCTGAGCTGGAAAGACATGTaGAGATTCTATCACCTGACA +
Preference number: 4 (lower is better)
Translates to: FIEATQETGQAAQDTWNLSWKDM*RFYHLT
Trigger: TGTCAGGTGATAGAATCTCCACATGTCTTTCCAGCT...CAGGTTCCAGGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCAGCTGGAAAGACATGTaGAGATTCTATCACCTGACA +
Preference number: 4 (lower is better)
Translates to: TSMADALRHVCRSDVASVSWKDM*RFYHLT
Trigger: TGTCAGGTGATAGAATCTCCACATGTCTTTCCAGCT...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGAGCTGGAAAGACATGTaGAGATTCTATCACCTGACA +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLSWKDM*RFYHLT
Trigger: TGTCAGGTGATAGAATCTCCACATGTCTTTCCAGCT...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGCACTTCTGCATTAGCTaGAAAGACATGTGGAGATTC +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLHFCIS*KDMWRF
Trigger: GAATCTCCACATGTCTTTCCAGCTAATGCAGAAGTG...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCCTGGGTTGGATTAAGTaGGAAAACCCTTCCTTAGTT +
Preference number: 4 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLLGWIK*ENPSLV
Trigger: AACTAAGGAAGGGTTTTCCCACTTAATCCAACCCAG...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTAAGGGGTTTGGACTGTTaGGAGGAGTATGAGGGACAA +
Preference number: 4 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLRGLDC*EEYEGQ
Trigger: TTGTCCCTCATACTCCTCCCAACAGTCCAAACCCCT...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACTGTCTGGTAGGGGTTTaGACTGTTGGGAGGAGTATG +
Preference number: 4 (lower is better)
Translates to: VWLLLVERARTFQHRSFNCLVGV*TVGRSM
Trigger: CATACTCCTCCCAACAGTCCAAACCCCTACCAGACA...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGGATTCCCTTTTCCATACTaGTTATTAGACACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: QQLQSSGSKDLLITEHPGFPFPY*LLDTVE
Trigger: TTCCACTGTGTCTAATAATCAGTATGGAAAAGGGAA...TCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTAGAATCATCAGTGGATaGTCAATCTCTTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTRIISG*SISSSL
Trigger: GAGTGAAGAAGAGATTGATCATCCACTGATGATTCT...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp AGAGTTGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCCTGAGTAGAAATATCTaGGAATGGAGCTGTAAGAAC +
Preference number: 4 (lower is better)
Translates to: RVGSLGRSASRKRTDVYGLSRNI*EWSCKN
Trigger: GTTCTTACAGCTCCATTCTCAGATATTTCTACTCAG...GCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGCTGAGTAGAAATATCTaGGAATGGAGCTGTAAGAAC +
Preference number: 4 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWLSRNI*EWSCKN
Trigger: GTTCTTACAGCTCCATTCTCAGATATTTCTACTCAG...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCGCACTTTCTTTACCCTaGAATTGCTGTTCAATATCC +
Preference number: 4 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLALSLP*NCCSIS
Trigger: GGATATTGAACAGCAATTTCAGGGTAAAGAAAGTGC...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp TCAGGTGTTTTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCAAGACACAGTCCCAATaGACTTCCCATCTTCAATTC +
Preference number: 4 (lower is better)
Translates to: SGVFIEATQETGQAAQDTKTQSQ*TSHLQF
Trigger: GAATTGAAGATGGGAAGTTCATTGGGACTGTGTCTT...GGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACAAAAACAGGAACAACTaGGACGAACTTGGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNKNRNN*DELGAF
Trigger: AAAAGCACCAAGTTCGTCTCAGTTGTTCCTGTTTTT...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCAAAAACAGGAACAACTaGGACGAACTTGGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: TSMADALRHVCRSDVASVKNRNN*DELGAF
Trigger: AAAAGCACCAAGTTCGTCTCAGTTGTTCCTGTTTTT...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTTACGCTGAGATGAGATaGAGGCAGATGCTACAGAAA +
Preference number: 4 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASYAEMR*RQMLQK
Trigger: TTTCTGTAGCATCTGCCTTCATCTCATCTCAGCGTA...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTTTCATTACGCTGAGATaGGATGAAGGCAGATGCTAC +
Preference number: 4 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASFITLR*DEGRCY
Trigger: GTAGCATCTGCCTTCATCTCATCTCAGCGTAATGAA...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCGATGATTCGAACCTTTaGATCGGGTTTATCCTTATC +
Preference number: 4 (lower is better)
Translates to: TSMADALRHVCRSDVASVDDSNL*IGFILI
Trigger: GATAAGGATAAACCCGATGCAAAGGTTCGAATCATC...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGGATGATTCGAACCTTTaGATCGGGTTTATCCTTATC +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLDDSNL*IGFILI
Trigger: GATAAGGATAAACCCGATGCAAAGGTTCGAATCATC...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCAGGTGTTTTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTCCTGCACATCATGTTaGCTCATTTCCTCATTACTG +
Preference number: 4 (lower is better)
Translates to: SGVFIEATQETGQAAQDTSCTSC*LISSLL
Trigger: CAGTAATGAGGAAATGAGGCAACATGATGTGCAGGA...GGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTATTCGATTCAGTTCCTaGACATCATGTTGCCTCATT +
Preference number: 4 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTIRFSS*TSCCLI
Trigger: AATGAGGCAACATGATGTGCAGGAACTGAATCGAAT...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTAGACAGTGCCCACTTCTaGATTAGCTGGAAAGACATG +
Preference number: 4 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLDSAHF*ISWKDM
Trigger: CATGTCTTTCCAGCTAATGCAGAAGTGGGCACTGTC...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATTCCCATCTTCAATTCTaGTTCCTTCAAAGTATAGCT +
Preference number: 4 (lower is better)
Translates to: GRPARHDTYSSGVIRSLYSHLQF*FLQSIA
Trigger: AGCTATACTTTGAAGGAAGCAGAATTGAAGATGGGA...ATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TTCAATCTTCTCCACGGGAAGACGATAGAAATCGGCAACTCTCTGCCTCAGGGATATTCCCTGAGTGGCTaGCGGTCAGTTCGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: FNLLHGKTIEIGNSLPQGYSLSG*RSVRKS
Trigger: GCTTTTACGAACTGACCGGCAGCCACTCAGGGAATA...TCCCTGAGGCAGAGAGTTGCCGATTTCTATCGTCTTCCCGTGGAGAAGATTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS-3UTR GCA 90 bp GGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATTTCACGCACACGTTGTaGATTTTCTGGTTAAAAGAA +
Preference number: 4 (lower is better)
Translates to: GRPARHDTYSSGVIRSLYFTHTL*IFWLKE
Trigger: TTCTTTTAACCAGAAAATGCACAACGTGTGCGTGAA...ATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACTGGAACCCCATATCTTaGATTAGCTCGAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VWLLLVERARTFQHRSFNWNPIS*ISSSFR
Trigger: CCTGAAGCTCGAGCTAATCCAAGATATGGGGTTCCA...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTCACTTCTGCATTAGCTaGAAAGACATGTGGAGATTC +
Preference number: 4 (lower is better)
Translates to: VFGLADIPRGFWPLEGKAHFCIS*KDMWRF
Trigger: GAATCTCCACATGTCTTTCCAGCTAATGCAGAAGTG...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTCCCATTTCTCTTCCTTaGTCAACAAGCTGTTATCAT +
Preference number: 4 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTPISLP*STSCYH
Trigger: ATGATAACAGCTTGTTGACCAAGGAAGAGAAATGGG...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGCCCATTTCTCTTCCTTaGTCAACAAGCTGTTATCAT +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLPISLP*STSCYH
Trigger: ATGATAACAGCTTGTTGACCAAGGAAGAGAAATGGG...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp AGAGCGACGGGAGCAATGATGAATCCGTTGGATGGCAGACTGTCCGAACACACTAAGACGAAGTACAGTTaGTCTGGTCCTGATGACTCT +
Preference number: 4 (lower is better)
Translates to: RATGAMMNPLDGRLSEHTKTKYS*SGPDDS
Trigger: AGAGTCATCAGGACCAGACCAACTGTACTTCGTCTT...AGTGTGTTCGGACAGTCTGCCATCCAACGGATTCATCATTGCTCCCGTCGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR CCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACTCAGCATCAGCTTGTTaGAAAAGGGTCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TLTALASSEASIISLCKDSASAC*KRVTGR
Trigger: CCTGCCTGTGACCCTTTTCCAACAAGCTGATGCTGA...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp AGAGTTGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCAATATTTCATTACGCTaGGATGAGATGAAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: RVGSLGRSASRKRTDVYGNISLR*DEMKAD
Trigger: ATCTGCCTTCATCTCATCTCAGCGTAATGAAATATT...GCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp AATGCCCTAGAAGCAGTTCCTGAGGGTTTTGAGGCAGAAAGATTGGAAGACATGCGTGATGTGTGCGGCTaGGTGCTGAGTAAGACAACA +
Preference number: 4 (lower is better)
Translates to: NALEAVPEGFEAERLEDMRDVCG*VLSKTT
Trigger: TGTTGTCTTACTCAGCACTCAGCCGCACACATCACG...CATGTCTTCCAATCTTTCTGCCTCAAAACCCTCAGGAACTGCTTCTAGGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR GCA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTTCCTGCACATCATGTTaGCTCATTTCCTCATTACTG +
Preference number: 4 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASSCTSC*LISSLL
Trigger: CAGTAATGAGGAAATGAGGCAACATGATGTGCAGGA...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCAGGTGTTTTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCATTCGATTCAGTTCCTaGACATCATGTTGCCTCATT +
Preference number: 4 (lower is better)
Translates to: SGVFIEATQETGQAAQDTIRFSS*TSCCLI
Trigger: AATGAGGCAACATGATGTGCAGGAACTGAATCGAAT...GGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTATTCCGCAGTGGTCCATaGTGTTTTCTGTACTTCTTG +
Preference number: 4 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLFRSGP*CFLYFL
Trigger: CAAGAAGTACAGAAAACAGCATGGACCACTGCGGAA...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTTCTGCCCTTTTGGTTTaGAGTTCAATGTTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASSALLV*SSMLAA
Trigger: TGCAGCTAACATTGAACTGCAAACCAAAAGGGCAGA...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACACTTTTCTCCATCACTaGTTGTGTCTAGATGAAGAA +
Preference number: 4 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNTFLHH*LCLDEE
Trigger: TTCTTCATCTAGACACAAGCAGTGATGGAGAAAAGT...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAACTTTTCTCCATCACTaGTTGTGTCTAGATGAAGAA +
Preference number: 4 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRTFLHH*LCLDEE
Trigger: TTCTTCATCTAGACACAAGCAGTGATGGAGAAAAGT...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTTTCAAGTAATACGGTaGCCCTTGCAAATAATCTTG +
Preference number: 4 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTFQVIR*PLQIIL
Trigger: CAAGATTATTTGCAAGGGGCACCGTATTACTTGAAA...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGATTCACGCACACGTTGTaGATTTTCTGGTTAAAAGAA +
Preference number: 4 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRFTHTL*IFWLKE
Trigger: TTCTTTTAACCAGAAAATGCACAACGTGTGCGTGAA...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCATCCTTTTCCCTGATTaGCTGGACTTTAGAATCATT +
Preference number: 4 (lower is better)
Translates to: TSMADALRHVCRSDVASVILFPD*LDFRII
Trigger: AATGATTCTAAAGTCCAGCCAATCAGGGAAAAGGAT...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGATCCTTTTCCCTGATTaGCTGGACTTTAGAATCATT +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLILFPD*LDFRII
Trigger: AATGATTCTAAAGTCCAGCCAATCAGGGAAAAGGAT...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACAAGACGAAGTACAGTTaGTCTGGTCCTGATGACTCT +
Preference number: 4 (lower is better)
Translates to: VWLLLVERARTFQHRSFNKTKYS*SGPDDS
Trigger: AGAGTCATCAGGACCAGACCAACTGTACTTCGTCTT...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAATAGAAATCTGGGTTaGATTAAGTGGGAAAACCCT +
Preference number: 4 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRNRNLG*IKWENP
Trigger: AGGGTTTTCCCACTTAATCCAACCCAGATTTCTATT...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp AGAGTTGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCAATAGAAATCTGGGTTaGATTAAGTGGGAAAACCCT +
Preference number: 4 (lower is better)
Translates to: RVGSLGRSASRKRTDVYGNRNLG*IKWENP
Trigger: AGGGTTTTCCCACTTAATCCAACCCAGATTTCTATT...GCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTAACCGGATACATTTTTaGCTGCTACTGTTAGATCTA +
Preference number: 4 (lower is better)
Translates to: HCEKPVRANESHLNTEESNRIHF*LLLLDL
Trigger: TAGATCTAACAGTAGCAGTCAAAAATGTATCCGGTT...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTAAGTTTCTGGCCCAGCTaGTCAACAGGAATTAGATTA +
Preference number: 4 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLSFWPS*STGIRL
Trigger: TAATCTAATTCCTGTTGATCAGCTGGGCCAGAAACT...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACCTGGAGGAAGCATCTTaGAAATTTGCTGGTCATTCC +
Preference number: 4 (lower is better)
Translates to: TLTALASSEASIISLCKDLEEAS*KFAGHS
Trigger: GGAATGACCAGCAAATTTTCAAGATGCTTCCTCCAG...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACGGAGATTCTATCACCTaGCAACACTTTTCTCCATCA +
Preference number: 4 (lower is better)
Translates to: VWLLLVERARTFQHRSFNGDSIT*QHFSPS
Trigger: TGATGGAGAAAAGTGTTGTCAGGTGATAGAATCTCC...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTAGGAGATTCTATCACCTaGCAACACTTTTCTCCATCA +
Preference number: 4 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLGDSIT*QHFSPS
Trigger: TGATGGAGAAAAGTGTTGTCAGGTGATAGAATCTCC...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTAAAAACAGGAACAACTaGGACGAACTTGGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASKNRNN*DELGAF
Trigger: AAAAGCACCAAGTTCGTCTCAGTTGTTCCTGTTTTT...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp TTTGTACAAGGGCAACAGAACTCACTGATAGTGACTTCTGCCCATCGTGATGTGATTTCTGTCCCAGGTTaGACGTCACTCCCCATTGCA +
Preference number: 4 (lower is better)
Translates to: FVQGQQNSLIVTSAHRDVISVPG*TSLPIA
Trigger: TGCAATGGGGAGTGACGTTCAACCTGGGACAGAAAT...CACATCACGATGGGCAGAAGTCACTATCAGTGAGTTCTGTTGCCCTTGTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR TCA 90 bp TCGCTCCATTTCTTTATAATGAAGTGGAACTCCTCTTTGTACAAGGGCAACAGATGTCCTGAGGGACCCTaGAGCTGGTACCACCAGATG +
Preference number: 4 (lower is better)
Translates to: SLHFFIMKWNSSLYKGNRCPEGP*SWYHQM
Trigger: CATCTGGTGGTACCAGCTTCAGGGTCCCTCAGGACA...TCTGTTGCCCTTGTACAAAGAGGAGTTCCACTTCATTATAAAGAAATGGAGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR TCA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGAATATTTCATTACGCTaGGATGAGATGAAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGNISLR*DEMKAD
Trigger: ATCTGCCTTCATCTCATCTCAGCGTAATGAAATATT...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACTGCAGAATCACATTCTaGCCTTTTGGTTTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: VWLLLVERARTFQHRSFNCRITF*PFGLQF
Trigger: GAACTGCAAACCAAAAGGGCAGAATGTGATTCTGCA...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp TCAGGTGTTTTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTCCCATCTTCAATTCTaGTTCCTTCAAAGTATAGCT +
Preference number: 4 (lower is better)
Translates to: SGVFIEATQETGQAAQDTSHLQF*FLQSIA
Trigger: AGCTATACTTTGAAGGAAGCAGAATTGAAGATGGGA...GGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACTCCATTTTTCGTAAATaGCAGGCATCTCCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: VWLLLVERARTFQHRSFNSIFRK*QASPCR
Trigger: CCTACAAGGAGATGCCTGGCATTTACGAAAAATGGA...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GAACTCCTCTTTGTACAAGGGCAACAGAACTCACTGATAGTGACTTCTGCCCATTGGCTCTCCAAACTCTaGCCCAAGACGAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: ELLFVQGQQNSLIVTSAHWLSKL*PKTKYS
Trigger: ACTGTACTTCGTCTTGGGGCAGAGTTTGGAGAGCCA...ATGGGCAGAAGTCACTATCAGTGAGTTCTGTTGCCCTTGTACAAAGAGGAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR GCA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTTTTCAAGTAATACGGTaGCCCTTGCAAATAATCTTG +
Preference number: 4 (lower is better)
Translates to: VFGLADIPRGFWPLEGKAFQVIR*PLQIIL
Trigger: CAAGATTATTTGCAAGGGGCACCGTATTACTTGAAA...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTCATAAATTTTTAACGTaGAGCCAGTCAATCTCATTC +
Preference number: 4 (lower is better)
Translates to: QTSMADALRHVCRSDVASHKFLT*SQSISF
Trigger: GAATGAGATTGACTGGCTCCACGTTAAAAATTTATG...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGCATAAATTTTTAACGTaGAGCCAGTCAATCTCATTC +
Preference number: 4 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLHKFLT*SQSISF
Trigger: GAATGAGATTGACTGGCTCCACGTTAAAAATTTATG...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp AGAGTTGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCCATAAATTTTTAACGTaGAGCCAGTCAATCTCATTC +
Preference number: 4 (lower is better)
Translates to: RVGSLGRSASRKRTDVYGHKFLT*SQSISF
Trigger: GAATGAGATTGACTGGCTCCACGTTAAAAATTTATG...GCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCTTTCGGGAAAGTATTTaGCAATTTCAATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TSMADALRHVCRSDVASVFRESI*QFQSSP
Trigger: TGGAGAAGATTGAAATTGCCAAATACTTTCCCGAAA...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGATTTCGGGAAAGTATTTaGCAATTTCAATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRFRESI*QFQSSP
Trigger: TGGAGAAGATTGAAATTGCCAAATACTTTCCCGAAA...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTTTCCCTTTTCCATACTaGTTATTAGACACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASFPFPY*LLDTVE
Trigger: TTCCACTGTGTCTAATAATCAGTATGGAAAAGGGAA...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTAACCGGATACATTTTTaGCTGCTACTGTTAGATCTA +
Preference number: 4 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASNRIHF*LLLLDL
Trigger: TAGATCTAACAGTAGCAGTCAAAAATGTATCCGGTT...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACAGAATCATCAGTGGATaGTCAATCTCTTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: VWLLLVERARTFQHRSFNRIISG*SISSSL
Trigger: GAGTGAAGAAGAGATTGATCATCCACTGATGATTCT...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACGCACTTTCTTTACCCTaGAATTGCTGTTCAATATCC +
Preference number: 4 (lower is better)
Translates to: VWLLLVERARTFQHRSFNALSLP*NCCSIS
Trigger: GGATATTGAACAGCAATTTCAGGGTAAAGAAAGTGC...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp GTTCCAGCTAGATATCGGAAGCCACTCGAACTTTTCGGGAAAGTATTTGGCAATCAGCGTGGCATCTTCTaGGATCTCTATGTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: VPARYRKPLELFGKVFGNQRGIF*DLYVSQ
Trigger: TTGGGAGACATAGAGATCTCAGAAGATGCCACGCTG...ATTGCCAAATACTTTCCCGAAAAGTTCGAGTGGCTTCCGATATCTAGCTGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS-3UTR GCA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTTTCAAAAGTATTGTTTaGAGAATCACATTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: HCEKPVRANESHLNTEESFKSIV*RITFCP
Trigger: AGGGCAGAATGTGATTCTGCAAACAATACTTTTGAA...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GCTAGATATCGGAAGCCACTCGAACTTTTCGGGAAAGTATTTGGCAATTTCAATCAGTTCGTAAAAGCCTaGCTGGGCGCTTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ARYRKPLELFGKVFGNFNQFVKA*LGASSP
Trigger: TGGAGAGGAAGCGCCCAGGCAGGCTTTTACGAACTG...ATTGAAATTGCCAAATACTTTCCCGAAAAGTTCGAGTGGCTTCCGATATCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS-3UTR CCA 90 bp GGTTACAGAGCACGTACAGAAATGGCACAGTGTTATTATTATGTGATGTCTGGAGCTGGTACCACCAGATaGGCACCTTCAGGAAACCCA +
Preference number: 4 (lower is better)
Translates to: GYRARTEMAQCYYYVMSGAGTTR*APSGNP
Trigger: TGGGTTTCCTGAAGGTGCCCATCTGGTGGTACCAGC...TCCAGACATCACATAATAATAACACTGTGCCATTTCTGTACGTGCTCTGTAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR CCA 90 bp GGTTACAGAGCACGTACAGAAATGGCACAGTGTTATTATTATGTGATGTCTGGAGTACGTGGTGATAAATaGGGCCCCTGTTGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GYRARTEMAQCYYYVMSGVRGDK*GPCCPE
Trigger: CTCAGGGCAACAGGGGCCCCATTTATCACCACGTAC...TCCAGACATCACATAATAATAACACTGTGCCATTTCTGTACGTGCTCTGTAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR TCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACCAAAATTCTAACAGCTaGAATATTGACTGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: TLTALASSEASIISLCKDQNSNS*NIDCRR
Trigger: TCTCCGGCAGTCAATATTTCAGCTGTTAGAATTTTG...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR TCA 90 bp TGGTACGTGGTGATAAATGGGGCCCCTGTTGCCCTGAGGATCTTGAGAGATGATGAGGATCTTGAGAGATaGTACATAAAAGTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: WYVVINGAPVALRILRDDEDLER*YIKVFG
Trigger: TCCAAAGACTTTTATGTATCATCTCTCAAGATCCTC...ATCATCTCTCAAGATCCTCAGGGCAACAGGGGCCCCATTTATCACCACGTACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR TCA 90 bp TTAGAATTGGATGAAGTCTCAATATTCTGGTACGTGGTGATAAATGGGGCCCCTTGTGCGGCTGAGTGCTaGGTAAGACAACATGCTTGT +
Preference number: 4 (lower is better)
Translates to: LELDEVSIFWYVVINGAPCAAEC*VRQHAC
Trigger: ACAAGCATGTTGTCTTACTCAGCACTCAGCCGCACA...AGGGGCCCCATTTATCACCACGTACCAGAATATTGAGACTTCATCCAATTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR GCA 90 bp CTGCCCCTGTGGGCTAAAATGACATCATTAGAATTGGATGAAGTCTCAATATTCAAATGGGGCCCCTGTTaGCCTGAGGATCTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LPLWAKMTSLELDEVSIFKWGPC*PEDLER
Trigger: TCTCTCAAGATCCTCAGGGCAACAGGGGCCCCATTT...GAATATTGAGACTTCATCCAATTCTAATGATGTCATTTTAGCCCACAGGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR CCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACTTTATATCAAACCAGTaGGGACAGGAGATGCTATTG +
Preference number: 4 (lower is better)
Translates to: TLTALASSEASIISLCKDFISNQ*GQEMLL
Trigger: CAATAGCATCTCCTGTCCCCACTGGTTTGATATAAA...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACCCCATTTCTCTTCCTTaGTCAACAAGCTGTTATCAT +
Preference number: 4 (lower is better)
Translates to: TLTALASSEASIISLCKDPISLP*STSCYH
Trigger: ATGATAACAGCTTGTTGACCAAGGAAGAGAAATGGG...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACTTCAAAAGTATTGTTTaGAGAATCACATTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: VWLLLVERARTFQHRSFNFKSIV*RITFCP
Trigger: AGGGCAGAATGTGATTCTGCAAACAATACTTTTGAA...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR GCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACACTTTTCTCCATCACTaGTTGTGTCTAGATGAAGAA +
Preference number: 4 (lower is better)
Translates to: TLTALASSEASIISLCKDTFLHH*LCLDEE
Trigger: TTCTTCATCTAGACACAAGCAGTGATGGAGAAAAGT...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACAATAGAAATCTGGGTTaGATTAAGTGGGAAAACCCT +
Preference number: 4 (lower is better)
Translates to: TLTALASSEASIISLCKDNRNLG*IKWENP
Trigger: AGGGTTTTCCCACTTAATCCAACCCAGATTTCTATT...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CCA 90 bp TCGCTCCATTTCTTTATAATGAAGTGGAACTCCTCTTTGTACAAGGGCAACAGAATTCTGTTCTCACCTTaGCTGGAAGTGGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SLHFFIMKWNSSLYKGNRILFSP*LEVALQ
Trigger: TTGGAGAGCCACTTCCAGCCAAGGTGAGAACAGAAT...TCTGTTGCCCTTGTACAAAGAGGAGTTCCACTTCATTATAAAGAAATGGAGCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR GCA 90 bp TTTGTACAAGGGCAACAGAACTCACTGATAGTGACTTCTGCCCATCGTGATGTGCTGAGTAAGACAACATaGTTGTACTTGTCTATGTTC +
Preference number: 4 (lower is better)
Translates to: FVQGQQNSLIVTSAHRDVLSKTT*LYLSMF
Trigger: GAACATAGACAAGTACAAGCATGTTGTCTTACTCAG...CACATCACGATGGGCAGAAGTCACTATCAGTGAGTTCTGTTGCCCTTGTACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR CCA 90 bp AGCAGTAGCAGTATTGTACTTGGAAAACTGATTCTTTCTCGGAAGGCAAATTCCTTCTCTAGGAGCAGGTaGCTCCAAAGCTTTAGTCTT +
Preference number: 4 (lower is better)
Translates to: SSSSIVLGKLILSRKANSFSRSR*LQSFSL
Trigger: AAGACTAAAGCTTTGGAGCCACCTGCTCCTAGAGAA...GGAATTTGCCTTCCGAGAAAGAATCAGTTTTCCAAGTACAATACTGCTACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443711.2
CDS-3UTR CCA 90 bp GAACTCCTCTTTGTACAAGGGCAACAGAACTCACTGATAGTGACTTCTGCCCATGAGCACGTACAGAAATaGCACAGTGTTATTATTATG +
Preference number: 4 (lower is better)
Translates to: ELLFVQGQQNSLIVTSAHEHVQK*HSVIIM
Trigger: CATAATAATAACACTGTGCCATTTCTGTACGTGCTC...ATGGGCAGAAGTCACTATCAGTGAGTTCTGTTGCCCTTGTACAAAGAGGAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR TCA 90 bp GCTCCATTTCTTTATAATGAAGTGGAACTCCTCTTTGTACAAGGGCAACAGAACAAGACACAGTCCCAATaGACTTCCCATCTTCAATTC +
Preference number: 4 (lower is better)
Translates to: APFLYNEVELLFVQGQQNKTQSQ*TSHLQF
Trigger: GAATTGAAGATGGGAAGTTCATTGGGACTGTGTCTT...GTTCTGTTGCCCTTGTACAAAGAGGAGTTCCACTTCATTATAAAGAAATGGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR TCA 90 bp TTAGAATTGGATGAAGTCTCAATATTCTGGTACGTGGTGATAAATGGGGCCCCTAAAAACAGGAACAACTaGGACGAACTTGGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LELDEVSIFWYVVINGAPKNRNN*DELGAF
Trigger: AAAAGCACCAAGTTCGTCTCAGTTGTTCCTGTTTTT...AGGGGCCCCATTTATCACCACGTACCAGAATATTGAGACTTCATCCAATTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR TCA 90 bp TTCTCAGAAGTCAGTGAGATGATATCAAATGCCCTAGAAGCAGTTCCTGAGGGTGCTAAATGGAAGCTATaGAAGTCTAGTTTCCTACTT +
Preference number: 4 (lower is better)
Translates to: FSEVSEMISNALEAVPEGAKWKL*KSSFLL
Trigger: AAGTAGGAAACTAGACTTTCATAGCTTCCATTTAGC...ACCCTCAGGAACTGCTTCTAGGGCATTTGATATCATCTCACTGACTTCTGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR GCA 90 bp TCTCTGCCCCTGTGGGCTAAAATGACATCATTAGAATTGGATGAAGTCTCAATATCCATTTTTCGTAAATaGCAGGCATCTCCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: SLPLWAKMTSLELDEVSISIFRK*QASPCR
Trigger: CCTACAAGGAGATGCCTGGCATTTACGAAAAATGGA...TATTGAGACTTCATCCAATTCTAATGATGTCATTTTAGCCCACAGGGGCAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR GCA 90 bp CTTCTGGGGGAAGCTAATGTGGATGTTCTGCAAATATTTCCTTCACCAGAAGAACCAAGTCACTTTCTTTaGATCGGGTTTATCCTTATC +
Preference number: 4 (lower is better)
Translates to: LLGEANVDVLQIFPSPEEPSHFL*IGFILI
Trigger: GATAAGGATAAACCCGATGCAAAGAAAGTGACTTGG...TTCTTCTGGTGAAGGAAATATTTGCAGAACATCCACATTAGCTTCCCCCAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443711.2
CDS-3UTR CCA 90 bp ATAGTGCTTTACAGAGGTTACAGAGCACGTACAGAAATGGCACAGTGTTATTATAAGACGAAGTACAGTTaGTCTGGTCCTGATGACTCT +
Preference number: 4 (lower is better)
Translates to: IVLYRGYRARTEMAQCYYKTKYS*SGPDDS
Trigger: AGAGTCATCAGGACCAGACCAACTGTACTTCGTCTT...ATAATAACACTGTGCCATTTCTGTACGTGCTCTGTAACCTCTGTAAAGCACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR CCA 90 bp AATTTCAATCTTCTCCACGGGAAGACGATAGAAATCGGCAACTCTCTGCCTCAGTTTCGGGAAAGTATTTaGCAATTTCAATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: NFNLLHGKTIEIGNSLPQFRESI*QFQSSP
Trigger: TGGAGAAGATTGAAATTGCCAAATACTTTCCCGAAA...CTGAGGCAGAGAGTTGCCGATTTCTATCGTCTTCCCGTGGAGAAGATTGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS-3UTR CCA 90 bp TCGCTCCATTTCTTTATAATGAAGTGGAACTCCTCTTTGTACAAGGGCAACAGACTCTTTATGATGCACTaGCTGCTGAAATCCCATTCT +
Preference number: 4 (lower is better)
Translates to: SLHFFIMKWNSSLYKGNRLFMMH*LLKSHS
Trigger: AGAATGGGATTTCAGCAGCCAGTGCATCATAAAGAG...TCTGTTGCCCTTGTACAAAGAGGAGTTCCACTTCATTATAAAGAAATGGAGCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR CCA 90 bp ATAGTGCTTTACAGAGGTTACAGAGCACGTACAGAAATGGCACAGTGTTATTATTGGTCTCTGCCCCTGTaGGCTAAAATGACATCATTA +
Preference number: 4 (lower is better)
Translates to: IVLYRGYRARTEMAQCYYWSLPL*AKMTSL
Trigger: TAATGATGTCATTTTAGCCCACAGGGGCAGAGACCA...ATAATAACACTGTGCCATTTCTGTACGTGCTCTGTAACCTCTGTAAAGCACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR CCA 90 bp AGCAGTAGCAGTATTGTACTTGGAAAACTGATTCTTTCTCGGAAGGCAAATTCCTGGGGGAAGCTAATGTaGATGTTCTGCAAATATTTC +
Preference number: 4 (lower is better)
Translates to: SSSSIVLGKLILSRKANSWGKLM*MFCKYF
Trigger: GAAATATTTGCAGAACATCCACATTAGCTTCCCCCA...GGAATTTGCCTTCCGAGAAAGAATCAGTTTTCCAAGTACAATACTGCTACTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443711.2
CDS-3UTR TCA 90 bp GCTCCATTTCTTTATAATGAAGTGGAACTCCTCTTTGTACAAGGGCAACAGAACAATAAATATATCAATTaGCTCTCAGAGCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: APFLYNEVELLFVQGQQNNKYIN*LSEHRQ
Trigger: CTGCCTGTGCTCTGAGAGTCAATTGATATATTTATT...GTTCTGTTGCCCTTGTACAAAGAGGAGTTCCACTTCATTATAAAGAAATGGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR GCA 90 bp CTGCCCCTGTGGGCTAAAATGACATCATTAGAATTGGATGAAGTCTCAATATTCTCCCATCTTCAATTCTaGTTCCTTCAAAGTATAGCT +
Preference number: 4 (lower is better)
Translates to: LPLWAKMTSLELDEVSIFSHLQF*FLQSIA
Trigger: AGCTATACTTTGAAGGAAGCAGAATTGAAGATGGGA...GAATATTGAGACTTCATCCAATTCTAATGATGTCATTTTAGCCCACAGGGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR TCA 90 bp AGTGCTTTAAATAGACTTCTGGGGGAAGCTAATGTGGATGTTCTGCAAATATTTTTCCCTTTTCCATACTaGTTATTAGACACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: SALNRLLGEANVDVLQIFFPFPY*LLDTVE
Trigger: TTCCACTGTGTCTAATAATCAGTATGGAAAAGGGAA...AAATATTTGCAGAACATCCACATTAGCTTCCCCCAGAAGTCTATTTAAAGCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000443711.2
CDS-3UTR TCA 90 bp AGTGCTTTAAATAGACTTCTGGGGGAAGCTAATGTGGATGTTCTGCAAATATTTTCCAGAGTACCAAATTaGAAGAATACTAGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: SALNRLLGEANVDVLQIFSRVPN*KNTSLY
Trigger: ATAGAGGCTAGTATTCTTTCAATTTGGTACTCTGGA...AAATATTTGCAGAACATCCACATTAGCTTCCCCCAGAAGTCTATTTAAAGCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443711.2
CDS-3UTR CAA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCTTCCTCATGTCTTCCTaGGGGATGGCCGTCCAACCC +
Preference number: 5 (lower is better)
Translates to: PHAQAGPAARACWTALQGFLMSS*GMAVQP
Trigger: GGGTTGGACGGCCATCCCCAAGGAAGACATGAGGAA...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS CCA 90 bp CCTGCCTGGGCGCTTCCTCTCCACCGTCCAGGCTCTGAGGTGGGCTaGGGACGGGACACCGAACTCCAGGAAAGGAGGCAAGGTCATGGC +
Preference number: 5 (lower is better)
Translates to: PAWALPLHRPGSEVG*GRDTELQERRQGHG
Trigger: GCCATGACCTTGCCTCCTTTCCTGGAGTTCGGTGTCCCGTCCCCAGCCCACCTCAGAGCCTGGACGGTGGAGAGGAAGCGCCCAGGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000430158.5
ENST00000450940.5
ENST00000450966.5
ENST00000473191.1
ENST00000483519.5
ENST00000496298.5
ENST00000678225.1
CDS-3UTR CAA 90 bp AGCCGGCAGTCCCACCCTGGGCCGCGTTCCACACCAGGTCCAGGGCAGGGGCATGTTCCCAGAAGCACCTaGGCTGGAAGTGGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: SRQSHPGPRSTPGPGQGHVPRST*AGSGSP
Trigger: TGGAGAGCCACTTCCAGCCAAGGTGCTTCTGGGAAC...ATGCCCCTGCCCTGGACCTGGTGTGGAACGCGGCCCAGGGTGGGACTGCCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS-3UTR CAA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCTTGCTGGTCATTCCTTaGGAAATCAGACTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PHAQAGPAARACWTALQGLLVIP*EIRLSL
Trigger: CAGGCTGAGTCTGATTTCCAAAGGAATGACCAGCAA...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGACTGGGCGCCGCCATGTaGGCGAGGGCGGGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRLGAAM*ARAGLQ
Trigger: CTGGAGACCCGCCCTCGCCAACATGGCGGCGCCCAG...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251722.10
ENST00000678225.1
CDS-3UTR CAA 90 bp GGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTGGTTCCCAGAAGCACCTaGGCTGGAAGTGGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: GRTRLLDGTSGHNPHASLVPRST*AGSGSP
Trigger: TGGAGAGCCACTTCCAGCCAAGGTGCTTCTGGGAAC...CAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp GGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTTGCCAGGAAACCCACGTTaGTGGCATCAGCCGGAGAGT +
Preference number: 5 (lower is better)
Translates to: GRTRLLDGTSGHNPHASLPGNPR*WHQPES
Trigger: ACTCTCCGGCTGATGCCACAAACGTGGGTTTCCTGG...CAAAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp AAAGGGAAGAAGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGAACCCACACGCGTCTTaGGACTTGCAGACATTCCGC +
Preference number: 5 (lower is better)
Translates to: KGKKAKATRTGRPGRTRLNPHAS*DLQTFR
Trigger: GCGGAATGTCTGCAAGTCCAAAGACGCGTGTGGGTT...CAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCTTCTTCCCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS TCA 90 bp TTCGTAAAAGCCTGCCTGGGCGCTTCCTCTCCACCGTCCAGGCTCTaGGGTGGGCTGGGGACGGGACACCGAACTCCAGGAAAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: FVKACLGASSPPSRL*GGLGTGHRTPGKEA
Trigger: TGCCTCCTTTCCTGGAGTTCGGTGTCCCGTCCCCAGCCCACCTCAGAGCCTGGACGGTGGAGAGGAAGCGCCCAGGCAGGCTTTTACGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000430158.5
ENST00000450940.5
ENST00000450966.5
ENST00000473191.1
ENST00000483519.5
ENST00000496298.5
ENST00000678225.1
CDS TCA 90 bp CCGGAGAGTTCATCGGGAGTAGAGCCGTGCAGCGGCGCGGTTATCTaGAGCTCCCCACGTGGATGGAGAGAGAAGTTTCCGGGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: PESSSGVEPCSGAVI*SSPRGWREKFPGLG
Trigger: CCCGAGCCCCGGAAACTTCTCTCTCCATCCACGTGGGGAGCTTCAGATAACCGCGCCGCTGCACGGCTCTACTCCCGATGAACTCTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000483519.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTCTGGGCGCCGCCATGTaGGCGAGGGCGGGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: HCEKPVRANESHLNTEESLGAAM*ARAGLQ
Trigger: CTGGAGACCCGCCCTCGCCAACATGGCGGCGCCCAG...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251722.10
ENST00000678225.1
CDS-3UTR CAA 90 bp AAAGGGAAGAAGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGTCCATTTCTGAGCCCTaGCTCCCTGAACGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: KGKKAKATRTGRPGRTRLSISEP*LPERLP
Trigger: AGGAAGACGTTCAGGGAGCAAGGGCTCAGAAATGGA...CAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCTTCTTCCCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACCAGCCCCCGTGGTAGAGGAGAGAAACTaGCGCAGGCTCGTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: QHLLAAGWATSRAAPAPVVEERN*RRLVPR
Trigger: TCTGGGAACGAGCCTGCGCAAGTTTCTCTCCTCTAC...CACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTGCAGAGGATTTGGGATaGGAGGCGCCAGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPAEDLG*EAPGSQ
Trigger: CTGGCTGCCTGGCGCCTCCAATCCCAAATCCTCTGC...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTGTGCAGCGGCTGCCCTaGCTTAGCAGAGCGACTCAC +
Preference number: 5 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPVQRLP*LSRATH
Trigger: GTGAGTCGCTCTGCTAAGCAAGGGCAGCCGCTGCAC...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CACACCTCCCACAGCGGAGCAACGGCATGCCGCTGCCTCCATACCTGCGGTTCACCAGGAAACCCACGTTaGTGGCATCAGCCGGAGAGT +
Preference number: 5 (lower is better)
Translates to: HTSHSGATACRCLHTCGSPGNPR*WHQPES
Trigger: ACTCTCCGGCTGATGCCACAAACGTGGGTTTCCTGG...TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCAAGCATCTTGAAAATTaGCTGGTCATTCCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: PHAQAGPAARACWTALQGKHLEN*LVIPLE
Trigger: TTCCAAAGGAATGACCAGCAAATTTTCAAGATGCTT...GCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCCATTTCTGTCCCAGGTaGAACGTCACTCCCCATTGC +
Preference number: 5 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSHFCPR*NVTPHC
Trigger: GCAATGGGGAGTGACGTTCAACCTGGGACAGAAATG...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CCGGCCGCACGCGCCTGCTGGACGGCACTTCAGGGCACAACCCACACGCGTCTTCGGTTCACGCACACGTaGTGCATTTTCTGGTTAAAA +
Preference number: 5 (lower is better)
Translates to: PAARACWTALQGTTHTRLRFTHT*CIFWLK
Trigger: TTTTAACCAGAAAATGCACAACGTGTGCGTGAACCG...AAGACGCGTGTGGGTTGTGCCCTGAAGTGCCGTCCAGCAGGCGCGTGCGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp TCAGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAACCCACACGCGTCTTaGGACTTGCAGACATTCCGC +
Preference number: 5 (lower is better)
Translates to: SDQRADVEHAGPERVGEMNPHAS*DLQTFR
Trigger: GCGGAATGTCTGCAAGTCCAAAGACGCGTGTGGGTT...CATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp AAAGGGAAGAAGGCAAAGGCCACACGCACAGGCCGGCCCGGCCGCACGCGCCTGCTGATTCCGCTTAAATaGGTGAATTCTCTAGGAGCA +
Preference number: 5 (lower is better)
Translates to: KGKKAKATRTGRPGRTRLLIPLK*VNSLGA
Trigger: TGCTCCTAGAGAATTCACCAATTTAAGCGGAATCAG...CAGGCGCGTGCGGCCGGGCCGGCCTGTGCGTGTGGCCTTTGCCTTCTTCCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp TGTGAGAGAGCCCAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACCACACGCTTTCTGTTaGAGAGACTACTGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: CERAQHLLAAGWATSRAAPHAFC*RDYWVQ
Trigger: CTGCACCCAGTAGTCTCTCAAACAGAAAGCGTGTGG...TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTCTCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGGCAGAGGATTTGGGATaGGAGGCGCCAGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGAEDLG*EAPGSQ
Trigger: CTGGCTGCCTGGCGCCTCCAATCCCAAATCCTCTGC...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp TCAGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGTGGCTCAGCATCAGCTaGTTGGAAAAGGGTCACAGG +
Preference number: 5 (lower is better)
Translates to: SDQRADVEHAGPERVGEMWLSIS*LEKGHR
Trigger: CCTGTGACCCTTTTCCAACAAGCTGATGCTGAGCCA...CATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CACACCTCCCACAGCGGAGCAACGGCATGCCGCTGCCTCCATACCTGCGGTTCAGGCAGCTTACGTAATTaGGCCGACTTTGCTGCTTTA +
Preference number: 5 (lower is better)
Translates to: HTSHSGATACRCLHTCGSGSLRN*ADFAAL
Trigger: TAAAGCAGCAAAGTCGGCCAAATTACGTAAGCTGCC...TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp AGAGTTGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCGTTCCCAGAAGCACCTaGGCTGGAAGTGGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: RVGSLGRSASRKRTDVYGVPRST*AGSGSP
Trigger: TGGAGAGCCACTTCCAGCCAAGGTGCTTCTGGGAAC...GCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp GGGGGCAGAGCGACGGGAGCAATGATGAATCCGTTGGATGGCAGACTGTCCGAAGTAGAGGAGAGAAACTaGCGCAGGCTCGTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: GGRATGAMMNPLDGRLSEVEERN*RRLVPR
Trigger: TCTGGGAACGAGCCTGCGCAAGTTTCTCTCCTCTAC...TTCGGACAGTCTGCCATCCAACGGATTCATCATTGCTCCCGTCGCTCTGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR CAA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTCCAGGAAACCCACGTTaGTGGCATCAGCCGGAGAGT +
Preference number: 5 (lower is better)
Translates to: QTSMADALRHVCRSDVASPGNPR*WHQPES
Trigger: ACTCTCCGGCTGATGCCACAAACGTGGGTTTCCTGG...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CACACCTCCCACAGCGGAGCAACGGCATGCCGCTGCCTCCATACCTGCGGTTCATCTCAGGTGTTTTCATaGAGGCTACTCAGGAAACCG +
Preference number: 5 (lower is better)
Translates to: HTSHSGATACRCLHTCGSSQVFS*RLLRKP
Trigger: CGGTTTCCTGAGTAGCCTCAATGAAAACACCTGAGA...TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCTCTCAGGTGTTTTCATaGAGGCTACTCAGGAAACCG +
Preference number: 5 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSSQVFS*RLLRKP
Trigger: CGGTTTCCTGAGTAGCCTCAATGAAAACACCTGAGA...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp AGAGTTGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCCACGCGTCTTTGGACTaGCAGACATTCCGCGAGGCT +
Preference number: 5 (lower is better)
Translates to: RVGSLGRSASRKRTDVYGHASLD*QTFREA
Trigger: AGCCTCGCGGAATGTCTGCAAGTCCAAAGACGCGTG...GCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCAACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp AGAGCGACGGGAGCAATGATGAATCCGTTGGATGGCAGACTGTCCGAACACACTCTGCGGGTGGGCCTCTaGCTGACACTTCAGGGCCAT +
Preference number: 5 (lower is better)
Translates to: RATGAMMNPLDGRLSEHTLRVGL*LTLQGH
Trigger: ATGGCCCTGAAGTGTCAGCAAGAGGCCCACCCGCAG...AGTGTGTTCGGACAGTCTGCCATCCAACGGATTCATCATTGCTCCCGTCGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS TCA 90 bp GGGAGCAATGATGAATCCGTTGGATGGCAGACTGTCCGAACACACTaGCAACAGCTGCGGGTGGGCCTCTTGCTGACACTTCAGGGCCAT +
Preference number: 5 (lower is better)
Translates to: GSNDESVGWQTVRTH*QQLRVGLLLTLQGH
Trigger: ATGGCCCTGAAGTGTCAGCAAGAGGCCCACCCGCAGCTGTTGTCAGTGTGTTCGGACAGTCTGCCATCCAACGGATTCATCATTGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS GCA 90 bp GCTCGTTCCCAGAAGCACCTTGGCTGGAAGTGGCTCTCCAAACTCTaGCCCAAGACGAAGTACAGTTGGTCTGGTCCTGATGACTCTCCC +
Preference number: 5 (lower is better)
Translates to: ARSQKHLGWKWLSKL*PKTKYSWSGPDDSP
Trigger: GGGAGAGTCATCAGGACCAGACCAACTGTACTTCGTCTTGGGGCAGAGTTTGGAGAGCCACTTCCAGCCAAGGTGCTTCTGGGAACGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000430158.5
ENST00000450966.5
ENST00000678225.1
CDS CCA 90 bp CTTCCTCATGTCTTCCTTGGGGATGGCCGTCCAACCCTCCCCACCTaGACATCCAGCACTGTTGATGAAGATGACACCTGCTGGGATTGC +
Preference number: 5 (lower is better)
Translates to: LPHVFLGDGRPTLPT*TSSTVDEDDTCWDC
Trigger: GCAATCCCAGCAGGTGTCATCTTCATCAACAGTGCTGGATGTCCAGGTGGGGAGGGTTGGACGGCCATCCCCAAGGAAGACATGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000678225.1
CDS CCA 90 bp GGCTGGAAGTGGCTCTCCAAACTCTGCCCCAAGACGAAGTACAGTTaGTCTGGTCCTGATGACTCTCCCAGTGTCCTGAGGGACCCTGAA +
Preference number: 5 (lower is better)
Translates to: GWKWLSKLCPKTKYS*SGPDDSPSVLRDPE
Trigger: TTCAGGGTCCCTCAGGACACTGGGAGAGTCATCAGGACCAGACCAACTGTACTTCGTCTTGGGGCAGAGTTTGGAGAGCCACTTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251722.10
ENST00000409945.1
ENST00000427112.6
ENST00000430158.5
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCTTCTGCCCTTTTGGTTaGCAGTTCAATGTTAGCTGC +
Preference number: 5 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSFCPFG*QFNVSC
Trigger: GCAGCTAACATTGAACTGCAAACCAAAAGGGCAGAA...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp TCAGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGGCAGTCAATACCAGTTaGAATGTGGACTCCACCAAC +
Preference number: 5 (lower is better)
Translates to: SDQRADVEHAGPERVGEMAVNTS*NVDSTN
Trigger: GTTGGTGGAGTCCACATTCAAACTGGTATTGACTGC...CATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGTTCCTCATGTCTTCCTaGGGGATGGCCGTCCAACCC +
Preference number: 5 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGFLMSS*GMAVQP
Trigger: GGGTTGGACGGCCATCCCCAAGGAAGACATGAGGAA...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTTTCCTCATGTCTTCCTaGGGGATGGCCGTCCAACCC +
Preference number: 5 (lower is better)
Translates to: VFGLADIPRGFWPLEGKAFLMSS*GMAVQP
Trigger: GGGTTGGACGGCCATCCCCAAGGAAGACATGAGGAA...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp GGGGGCAGAGCGACGGGAGCAATGATGAATCCGTTGGATGGCAGACTGTCCGAACATTTCTGTCCCAGGTaGAACGTCACTCCCCATTGC +
Preference number: 5 (lower is better)
Translates to: GGRATGAMMNPLDGRLSEHFCPR*NVTPHC
Trigger: GCAATGGGGAGTGACGTTCAACCTGGGACAGAAATG...TTCGGACAGTCTGCCATCCAACGGATTCATCATTGCTCCCGTCGCTCTGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR CAA 90 bp GCGACGGGAGCAATGATGAATCCGTTGGATGGCAGACTGTCCGAACACACTGACGTTCCCAGAAGCACCTaGGCTGGAAGTGGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: ATGAMMNPLDGRLSEHTDVPRST*AGSGSP
Trigger: TGGAGAGCCACTTCCAGCCAAGGTGCTTCTGGGAAC...GTCAGTGTGTTCGGACAGTCTGCCATCCAACGGATTCATCATTGCTCCCGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR CAA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGGTAGAGGAGAGAAACTaGCGCAGGCTCGTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLVEERN*RRLVPR
Trigger: TCTGGGAACGAGCCTGCGCAAGTTTCTCTCCTCTAC...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp ATAAGCTGGACCCTTGGCCTGCGGGCTGACGTGCAGCGGCTGCCCTTGCTTAGCCCTCTTGGTTATTTGTaGGTTCCAGCTAGATATCGG +
Preference number: 5 (lower is better)
Translates to: ISWTLGLRADVQRLPLLSPLGYL*VPARYR
Trigger: CCGATATCTAGCTGGAACCAACAAATAACCAAGAGG...GCTAAGCAAGGGCAGCCGCTGCACGTCAGCCCGCAGGCCAAGGGTCCAGCTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTCTCATGGAGGGCTTCTaGGCTTTTCCTTCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSLMEGF*AFPSPQ
Trigger: CTGGGGAGAAGGAAAAGCCAAGAAGCCCTCCATGAG...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTCTCATGGAGGGCTTCTaGGCTTTTCCTTCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: QTSMADALRHVCRSDVASLMEGF*AFPSPQ
Trigger: CTGGGGAGAAGGAAAAGCCAAGAAGCCCTCCATGAG...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTAGCAGAGGATTTGGGATaGGAGGCGCCAGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLAEDLG*EAPGSQ
Trigger: CTGGCTGCCTGGCGCCTCCAATCCCAAATCCTCTGC...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp TCAGGTGTTTTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCCACGCGTCTTTGGACTaGCAGACATTCCGCGAGGCT +
Preference number: 5 (lower is better)
Translates to: SGVFIEATQETGQAAQDTHASLD*QTFREA
Trigger: AGCCTCGCGGAATGTCTGCAAGTCCAAAGACGCGTG...GGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS TCA 90 bp AGACGAAGTACAGTTGGTCTGGTCCTGATGACTCTCCCAGTGTCCTaGGGGACCCTGAAGCTGGTACCACCAGATGGGCACCTTCAGGAA +
Preference number: 5 (lower is better)
Translates to: RRSTVGLVLMTLPVS*GTLKLVPPDGHLQE
Trigger: TTCCTGAAGGTGCCCATCTGGTGGTACCAGCTTCAGGGTCCCTCAGGACACTGGGAGAGTCATCAGGACCAGACCAACTGTACTTCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251722.10
ENST00000409945.1
ENST00000427112.6
ENST00000430158.5
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCACCAGCCCCCGTGAAACCGGATACATTTTaGACTGCTACTGTTAGATCT +
Preference number: 5 (lower is better)
Translates to: QHLLAAGWATSRAAPAPVKPDTF*TATVRS
Trigger: AGATCTAACAGTAGCAGTCAAAAATGTATCCGGTTT...CACGGGGGCTGGTGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGGCAGCTTACGTAATTaGGCCGACTTTGCTGCTTTA +
Preference number: 5 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPGSLRN*ADFAAL
Trigger: TAAAGCAGCAAAGTCGGCCAAATTACGTAAGCTGCC...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CACACCTCCCACAGCGGAGCAACGGCATGCCGCTGCCTCCATACCTGCGGTTCATCTGGAGGAAGCATCTaGAAAATTTGCTGGTCATTC +
Preference number: 5 (lower is better)
Translates to: HTSHSGATACRCLHTCGSSGGSI*KICWSF
Trigger: GAATGACCAGCAAATTTTCAAGATGCTTCCTCCAGA...TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGACCACACGCTTTCTGTTaGAGAGACTACTGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRPHAFC*RDYWVQ
Trigger: CTGCACCCAGTAGTCTCTCAAACAGAAAGCGTGTGG...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp TGTGAGAGAGCCCAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCAGGTCTCAAACAGCTGTaGTCAGCTAGTTCCTTCATT +
Preference number: 5 (lower is better)
Translates to: CERAQHLLAAGWATSRAAGLKQL*SASSFI
Trigger: AATGAAGGAACTAGCTGACAACAGCTGTTTGAGACC...TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTCTCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp TCAGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGGGTCTCAAACAGCTGTaGTCAGCTAGTTCCTTCATT +
Preference number: 5 (lower is better)
Translates to: SDQRADVEHAGPERVGEMGLKQL*SASSFI
Trigger: AATGAAGGAACTAGCTGACAACAGCTGTTTGAGACC...CATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGACATTTCTGTCCCAGGTaGAACGTCACTCCCCATTGC +
Preference number: 5 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRHFCPR*NVTPHC
Trigger: GCAATGGGGAGTGACGTTCAACCTGGGACAGAAATG...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS TCA 90 bp AGACTGTCCGAACACACTGACAACAGCTGCGGGTGGGCCTCTTGCTaGCACTTCAGGGCCATCATGGGGTCAATATGCACCCCAAGTTTT +
Preference number: 5 (lower is better)
Translates to: RLSEHTDNSCGWASC*HFRAIMGSICTPSF
Trigger: AAAACTTGGGGTGCATATTGACCCCATGATGGCCCTGAAGTGTCAGCAAGAGGCCCACCCGCAGCTGTTGTCAGTGTGTTCGGACAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR CAA 90 bp TGTGAGAGAGCCCAGCACCTACTGGCAGCTGGGTGGGCGACATCCAGAGCTGCATTCCTGCACATCATGTaGCCTCATTTCCTCATTACT +
Preference number: 5 (lower is better)
Translates to: CERAQHLLAAGWATSRAAFLHIM*PHFLIT
Trigger: AGTAATGAGGAAATGAGGCAACATGATGTGCAGGAA...TGCAGCTCTGGATGTCGCCCACCCAGCTGCCAGTAGGTGCTGGGCTCTCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CACACCTCCCACAGCGGAGCAACGGCATGCCGCTGCCTCCATACCTGCGGTTCATCACATTCTGCCCTTTaGGTTTGCAGTTCAATGTTA +
Preference number: 5 (lower is better)
Translates to: HTSHSGATACRCLHTCGSSHSAL*VCSSML
Trigger: TAACATTGAACTGCAAACCAAAAGGGCAGAATGTGA...TGAACCGCAGGTATGGAGGCAGCGGCATGCCGTTGCTCCGCTGTGGGAGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp AGACCAAAGGGCAGACGTGGAGCATGCGGGGCCGGAACGAGTGGGGGAAATGAACTAACAGCTGAAATATaGACTGCCGGAGATCTCCTA +
Preference number: 5 (lower is better)
Translates to: RPKGRRGACGAGTSGGNELTAEI*TAGDLL
Trigger: TAGGAGATCTCCGGCAGTCAATATTTCAGCTGTTAG...TTCATTTCCCCCACTCGTTCCGGCCCCGCATGCTCCACGTCTGCCCTTTGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTAGTTCCCAGAAGCACCTaGGCTGGAAGTGGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLVPRST*AGSGSP
Trigger: TGGAGAGCCACTTCCAGCCAAGGTGCTTCTGGGAAC...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACGCGTCTTTGGACTaGCAGACATTCCGCGAGGCT +
Preference number: 5 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLHASLD*QTFREA
Trigger: AGCCTCGCGGAATGTCTGCAAGTCCAAAGACGCGTG...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS GCA 90 bp ATCCCATTCTGTTCTCACCTTGGCTGGAAGTGGCTCTCCAAACTCTaGCCCAAGACGAAGTACAGTTGGTCTGGTCCTGATGACTCTCCC +
Preference number: 5 (lower is better)
Translates to: IPFCSHLGWKWLSKL*PKTKYSWSGPDDSP
Trigger: GGGAGAGTCATCAGGACCAGACCAACTGTACTTCGTCTTGGGGCAGAGTTTGGAGAGCCACTTCCAGCCAAGGTGAGAACAGAATGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS CCA 90 bp GGAAAGGAGGCAAGGTCATGGCCTGAGACTTCAGCTCCGCCAGCGTaGCATCTTCTGAGATCTCTATGTCTCCCAAGTAGAGGAGAGAAA +
Preference number: 5 (lower is better)
Translates to: GKEARSWPETSAPPA*HLLRSLCLPSRGEK
Trigger: TTTCTCTCCTCTACTTGGGAGACATAGAGATCTCAGAAGATGCCACGCTGGCGGAGCTGAAGTCTCAGGCCATGACCTTGCCTCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000430158.5
ENST00000450966.5
ENST00000473191.1
ENST00000678225.1
CDS-3UTR CAA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTGTTCACAAAAGGGCTaGAGATTAATCCGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTCSQKG*RLIRRG
Trigger: CCCTCTCCGGATTAATCTCAAGCCCTTTTGTGAACA...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTTGTTCACAAAAGGGCTaGAGATTAATCCGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: QTSMADALRHVCRSDVASCSQKG*RLIRRG
Trigger: CCCTCTCCGGATTAATCTCAAGCCCTTTTGTGAACA...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp TCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGAAACTGTTCACAAAAGGGCTaGAGATTAATCCGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: SALTLQCCFPSVTGLTRNCSQKG*RLIRRG
Trigger: CCCTCTCCGGATTAATCTCAAGCCCTTTTGTGAACA...GTTTCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTTCCATTTCTGAGCCCTaGCTCCCTGAACGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASSISEP*LPERLP
Trigger: AGGAAGACGTTCAGGGAGCAAGGGCTCAGAAATGGA...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGGAGGTCTCAAACAGCTGTaGTCAGCTAGTTCCTTCATT +
Preference number: 5 (lower is better)
Translates to: QQLQSSGSKDLLITEHPGGLKQL*SASSFI
Trigger: AATGAAGGAACTAGCTGACAACAGCTGTTTGAGACC...TCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTAGTAGAGGAGAGAAACTaGCGCAGGCTCGTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLVEERN*RRLVPR
Trigger: TCTGGGAACGAGCCTGCGCAAGTTTCTCTCCTCTAC...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACTCATGGAGGGCTTCTaGGCTTTTCCTTCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLLMEGF*AFPSPQ
Trigger: CTGGGGAGAAGGAAAAGCCAAGAAGCCCTCCATGAG...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGGACGGTTCACGCACACGTaGTGCATTTTCTGGTTAAAA +
Preference number: 5 (lower is better)
Translates to: QQLQSSGSKDLLITEHPGRFTHT*CIFWLK
Trigger: TTTTAACCAGAAAATGCACAACGTGTGCGTGAACCG...TCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTAAACCCACACGCGTCTTaGGACTTGCAGACATTCCGC +
Preference number: 5 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLNPHAS*DLQTFR
Trigger: GCGGAATGTCTGCAAGTCCAAAGACGCGTGTGGGTT...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp ATAAGGGGGCAGAGCGACGGGAGCAATGATGAATCCGTTGGATGGCAGACTGTCGCAATGATGAATCCGTaGGATGGCAGACTGTCCGAA +
Preference number: 5 (lower is better)
Translates to: IRGQSDGSNDESVGWQTVAMMNP*DGRLSE
Trigger: TTCGGACAGTCTGCCATCCAACGGATTCATCATTGC...GACAGTCTGCCATCCAACGGATTCATCATTGCTCCCGTCGCTCTGCCCCCTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR CAA 90 bp GTCTTTGGACTTGCAGACATTCCGCGAGGCTTCTGGCCTCTCGAAGGCAAAGCTGGCAGCTTACGTAATTaGGCCGACTTTGCTGCTTTA +
Preference number: 5 (lower is better)
Translates to: VFGLADIPRGFWPLEGKAGSLRN*ADFAAL
Trigger: TAAAGCAGCAAAGTCGGCCAAATTACGTAAGCTGCC...AGCTTTGCCTTCGAGAGGCCAGAAGCCTCGCGGAATGTCTGCAAGTCCAAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTTTGCTGGTCATTCCTTaGGAAATCAGACTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: HCEKPVRANESHLNTEESLLVIP*EIRLSL
Trigger: CAGGCTGAGTCTGATTTCCAAAGGAATGACCAGCAA...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTGGACAGGAGATGCTATaGTTTAAACCTGGGGATTCT +
Preference number: 5 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTGQEML*FKPGDS
Trigger: AGAATCCCCAGGTTTAAACAATAGCATCTCCTGTCC...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp GCAAAGACGCAGTCTACACCCAGTGCGAGTCTCCTGAGCGGGGTTAGTGTTTGGTTCTGCCCTTTTGGTTaGCAGTTCAATGTTAGCTGC +
Preference number: 5 (lower is better)
Translates to: AKTQSTPSASLLSGVSVWFCPFG*QFNVSC
Trigger: GCAGCTAACATTGAACTGCAAACCAAAAGGGCAGAA...CCAAACACTAACCCCGCTCAGGAGACTCGCACTGGGTGTAGACTGCGTCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACCCACACGCTTTCTGTTaGAGAGACTACTGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: VWLLLVERARTFQHRSFNPHAFC*RDYWVQ
Trigger: CTGCACCCAGTAGTCTCTCAAACAGAAAGCGTGTGG...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTATCCATTTCTGAGCCCTaGCTCCCTGAACGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLSISEP*LPERLP
Trigger: AGGAAGACGTTCAGGGAGCAAGGGCTCAGAAATGGA...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp TGGTACGTGGTGATAAATGGGGCCCCTGTTGCCCTGAGGATCTTGAGAGATGATCATTTCTGTCCCAGGTaGAACGTCACTCCCCATTGC +
Preference number: 5 (lower is better)
Translates to: WYVVINGAPVALRILRDDHFCPR*NVTPHC
Trigger: GCAATGGGGAGTGACGTTCAACCTGGGACAGAAATG...ATCATCTCTCAAGATCCTCAGGGCAACAGGGGCCCCATTTATCACCACGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR CAA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACATTTCTGTCCCAGGTaGAACGTCACTCCCCATTGC +
Preference number: 5 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLHFCPR*NVTPHC
Trigger: GCAATGGGGAGTGACGTTCAACCTGGGACAGAAATG...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp GGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTGGCGTCATCAGAAGCCTGAAGTTCTTTCAGTGTaGCATCTTCTTCACATAAAG +
Preference number: 5 (lower is better)
Translates to: GWAPSSSRHLQLWRHQKPEVLSV*HLLHIK
Trigger: CTTTATGTGAAGAAGATGCAACACTGAAAGAACTTC...AGGCTTCTGATGACGCCAGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CTTTCTGCCCTCACACTTCAGTGCTGCTTCCCATCAGTGACGGGGCTGACGAGACCTCTTGGTTATTTGTaGGTTCCAGCTAGATATCGG +
Preference number: 5 (lower is better)
Translates to: LSALTLQCCFPSVTGLTRPLGYL*VPARYR
Trigger: CCGATATCTAGCTGGAACCAACAAATAACCAAGAGG...TCTCGTCAGCCCCGTCACTGATGGGAAGCAGCACTGAAGTGTGAGGGCAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGCGGTTCACGCACACGTaGTGCATTTTCTGGTTAAAA +
Preference number: 5 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLRFTHT*CIFWLK
Trigger: TTTTAACCAGAAAATGCACAACGTGTGCGTGAACCG...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTATGGCTCAGCATCAGCTaGTTGGAAAAGGGTCACAGG +
Preference number: 5 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLWLSIS*LEKGHR
Trigger: CCTGTGACCCTTTTCCAACAAGCTGATGCTGAGCCA...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS TCA 90 bp CATGTTGCCTCATTTCCTCATTACTGGTCCACCCAAAGCTGTCAGTaGGGTCTGCTGTGGATGCAGCTTCCTGGTCTAAGAGCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: HVASFPHYWSTQSCQ*GLLWMQLPGLRAEA
Trigger: AGCTTCTGCTCTTAGACCAGGAAGCTGCATCCACAGCAGACCTCACTGACAGCTTTGGGTGGACCAGTAATGAGGAAATGAGGCAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000427947.7
ENST00000450966.5
ENST00000484528.1
ENST00000678225.1
CDS-3UTR CAA 90 bp CGGCAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAAAACCGGATACATTTTaGACTGCTACTGTTAGATCT +
Preference number: 5 (lower is better)
Translates to: RQQLQSSGSKDLLITEHPKPDTF*TATVRS
Trigger: AGATCTAACAGTAGCAGTCAAAAATGTATCCGGTTT...TGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp TTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTGGAACCTGCCACAGTGGTACAAGTaGTCACAATCAAAAACTTCC +
Preference number: 5 (lower is better)
Translates to: FIEATQETGQAAQDTWNLPQWYK*SQSKTS
Trigger: GGAAGTTTTTGATTGTGACAACTTGTACCACTGTGG...CAGGTTCCAGGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CCACAGAAACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTCCACAGTGGTACAAGTaGTCACAATCAAAAACTTCC +
Preference number: 5 (lower is better)
Translates to: PQKQNSLRRAGRPARHDTPQWYK*SQSKTS
Trigger: GGAAGTTTTTGATTGTGACAACTTGTACCACTGTGG...AGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGTTTCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGGGACAGGAGATGCTATaGTTTAAACCTGGGGATTCT +
Preference number: 5 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGGQEML*FKPGDS
Trigger: AGAATCCCCAGGTTTAAACAATAGCATCTCCTGTCC...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CAGCAGCTGCAGTCCTCGGGATCCAAGGACCTTCTGATCACAGAGCACCCAGGATCACATTCTGCCCTTTaGGTTTGCAGTTCAATGTTA +
Preference number: 5 (lower is better)
Translates to: QQLQSSGSKDLLITEHPGSHSAL*VCSSML
Trigger: TAACATTGAACTGCAAACCAAAAGGGCAGAATGTGA...TCCTGGGTGCTCTGTGATCAGAAGGTCCTTGGATCCCGAGGACTGCAGCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp GAGTATGAGGGACAAAGCAGGCCGCTGGCTCAGCATCAGCTTGTTGGAAAAGGGCTAACAGCTGAAATATaGACTGCCGGAGATCTCCTA +
Preference number: 5 (lower is better)
Translates to: EYEGQSRPLAQHQLVGKGLTAEI*TAGDLL
Trigger: TAGGAGATCTCCGGCAGTCAATATTTCAGCTGTTAG...CCCTTTTCCAACAAGCTGATGCTGAGCCAGCGGCCTGCTTTGTCCCTCATACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp TCAGGTGTTTTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCCTAACAGCTGAAATATaGACTGCCGGAGATCTCCTA +
Preference number: 5 (lower is better)
Translates to: SGVFIEATQETGQAAQDTLTAEI*TAGDLL
Trigger: TAGGAGATCTCCGGCAGTCAATATTTCAGCTGTTAG...GGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CACTGTGAGAAGCCGGTCAGGGCGAACGAGAGTCATCTGAACACGGAGGAAAGTTTCCTGCACATCATGTaGCCTCATTTCCTCATTACT +
Preference number: 5 (lower is better)
Translates to: HCEKPVRANESHLNTEESFLHIM*PHFLIT
Trigger: AGTAATGAGGAAATGAGGCAACATGATGTGCAGGAA...ACTTTCCTCCGTGTTCAGATGACTCTCGTTCGCCCTGACCGGCTTCTCACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACACCCAGTGCGAGTTTCTGCCCTTTTGGTTaGCAGTTCAATGTTAGCTGC +
Preference number: 5 (lower is better)
Translates to: QKPLSSPSAKTQSTPSASFCPFG*QFNVSC
Trigger: GCAGCTAACATTGAACTGCAAACCAAAAGGGCAGAA...ACTCGCACTGGGTGTAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp ACAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTCACATTCTGCCCTTTaGGTTTGCAGTTCAATGTTA +
Preference number: 5 (lower is better)
Translates to: TEQLKKGWAPSSSRHLQLSHSAL*VCSSML
Trigger: TAACATTGAACTGCAAACCAAAAGGGCAGAATGTGA...GAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp TGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCAGACGATTCAAAAGTATTGTTaGCAGAATCACATTCTGCCC +
Preference number: 5 (lower is better)
Translates to: WVLRAQCFTETHRRLWQTIQKYC*QNHILP
Trigger: GGGCAGAATGTGATTCTGCAAACAATACTTTTGAAT...CGTCTGCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTAGCAGTCAATACCAGTTaGAATGTGGACTCCACCAAC +
Preference number: 5 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLAVNTS*NVDSTN
Trigger: GTTGGTGGAGTCCACATTCAAACTGGTATTGACTGC...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp ATCCGTTGGATGGCAGACTGTCCGAACACACTGACAACAGCTGCGGGTGGGCCTGAAGTTCTTTCAGTGTaGCATCTTCTTCACATAAAG +
Preference number: 5 (lower is better)
Translates to: IRWMADCPNTLTTAAGGPEVLSV*HLLHIK
Trigger: CTTTATGTGAAGAAGATGCAACACTGAAAGAACTTC...AGGCCCACCCGCAGCTGTTGTCAGTGTGTTCGGACAGTCTGCCATCCAACGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430158.5
CDS-3UTR CAA 90 bp TGGGTCCTTAGGGCGCAGTGCTTCACGGAAACGCACAGACGTCTATGGCAGACGGAAGTTCTTTCAGTGTaGCATCTTCTTCACATAAAG +
Preference number: 5 (lower is better)
Translates to: WVLRAQCFTETHRRLWQTEVLSV*HLLHIK
Trigger: CTTTATGTGAAGAAGATGCAACACTGAAAGAACTTC...CGTCTGCCATAGACGTCTGTGCGTTTCCGTGAAGCACTGCGCCCTAAGGACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS TCA 90 bp CCCACACGCTTTCTGTTTGAGAGACTACTGGGTGCAGAGCCCCATTaGAGAAATGATACTGAGGGCCCAGGTGAAGATGCAATTCAAAAG +
Preference number: 5 (lower is better)
Translates to: PTRFLFERLLGAEPH*RNDTEGPGEDAIQK
Trigger: CTTTTGAATTGCATCTTCACCTGGGCCCTCAGTATCATTTCTTCAATGGGGCTCTGCACCCAGTAGTCTCTCAAACAGAAAGCGTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000485943.1
ENST00000678225.1
CDS TCA 90 bp GGAGGCAAGGTCATGGCCCTGAGCGGTCTTCATATTCCTCTGCACTaGAATCACCTTGAGAAAGAAGTGAGTTCCCTCTCTCTAAATCTG +
Preference number: 5 (lower is better)
Translates to: GGKVMALSGLHIPLH*NHLEKEVSSLSLNL
Trigger: CAGATTTAGAGAGAGGGAACTCACTTCTTTCTCAAGGTGATTTCAGTGCAGAGGAATATGAAGACCGCTCAGGGCCATGACCTTGCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496298.5
CDS-3UTR CAA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACTTGCTGGTCATTCCTTaGGAAATCAGACTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: TLTALASSEASIISLCKDLLVIP*EIRLSL
Trigger: CAGGCTGAGTCTGATTTCCAAAGGAATGACCAGCAA...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp TTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTGGAACCTGAAGCATCTTGAAAATTaGCTGGTCATTCCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: FIEATQETGQAAQDTWNLKHLEN*LVIPLE
Trigger: TTCCAAAGGAATGACCAGCAAATTTTCAAGATGCTT...CAGGTTCCAGGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CAGAACAGCTTAAGAAGGGCTGGGCGCCCAGCTCGTCACGACACTTACAGCTCTAAGCATCTTGAAAATTaGCTGGTCATTCCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: QNSLRRAGRPARHDTYSSKHLEN*LVIPLE
Trigger: TTCCAAAGGAATGACCAGCAAATTTTCAAGATGCTT...AGAGCTGTAAGTGTCGTGACGAGCTGGGCGCCCAGCCCTTCTTAAGCTGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp TCAGGACATGCGACACCGTCTTCGGGATGCTGCTTTCCGCTAAGCTGCTGTCTGATTCAAAAGTATTGTTaGCAGAATCACATTCTGCCC +
Preference number: 5 (lower is better)
Translates to: SGHATPSSGCCFPLSCCLIQKYC*QNHILP
Trigger: GGGCAGAATGTGATTCTGCAAACAATACTTTTGAAT...CAGACAGCAGCTTAGCGGAAAGCAGCATCCCGAAGACGGTGTCGCATGTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp TTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTGGAACCTGGAAGTTCTTTCAGTGTaGCATCTTCTTCACATAAAG +
Preference number: 5 (lower is better)
Translates to: FIEATQETGQAAQDTWNLEVLSV*HLLHIK
Trigger: CTTTATGTGAAGAAGATGCAACACTGAAAGAACTTC...CAGGTTCCAGGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACCTCTTGGTTATTTGTaGGTTCCAGCTAGATATCGG +
Preference number: 5 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLPLGYL*VPARYR
Trigger: CCGATATCTAGCTGGAACCAACAAATAACCAAGAGG...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCTTTCCTCTTGGTTATTaGTTGGTTCCAGCTAGATAT +
Preference number: 5 (lower is better)
Translates to: TSMADALRHVCRSDVASVFPLGY*LVPARY
Trigger: ATATCTAGCTGGAACCAACAAATAACCAAGAGGAAA...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CAGACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTTTTCCTCTTGGTTATTaGTTGGTTCCAGCTAGATAT +
Preference number: 5 (lower is better)
Translates to: QTSMADALRHVCRSDVASFPLGY*LVPARY
Trigger: ATATCTAGCTGGAACCAACAAATAACCAAGAGGAAA...AGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp AATGCCCTAGAAGCAGTTCCTGAGGGTTTTGAGGCAGAAAGATTGGAAGACATGCATTCTGTTCTCACCTaGGCTGGAAGTGGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: NALEAVPEGFEAERLEDMHSVLT*AGSGSP
Trigger: TGGAGAGCCACTTCCAGCCAAGGTGAGAACAGAATG...CATGTCTTCCAATCTTTCTGCCTCAAAACCCTCAGGAACTGCTTCTAGGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR CAA 90 bp ACGTCTATGGCAGACGCTCTCAGACACGTGTGCAGAAGCGACGTGGCTTCTGTCCCTCCTCTAATAAGATaGCTTTTAGAATCATCAGTG +
Preference number: 5 (lower is better)
Translates to: TSMADALRHVCRSDVASVPPLIR*LLESSV
Trigger: CACTGATGATTCTAAAAGCAATCTTATTAGAGGAGG...GACAGAAGCCACGTCGCTTCTGCACACGTGTCTGAGAGCGTCTGCCATAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678225.1
CDS CCA 90 bp TTTATCAAAGGTCAAATCCCACACGCTTTCTGTTTGAGAGACTACTaGGTGCAGAGCCCCATTGAAGAAATGATACTGAGGGCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: FIKGQIPHAFCLRDY*VQSPIEEMILRAQV
Trigger: CACCTGGGCCCTCAGTATCATTTCTTCAATGGGGCTCTGCACCCAGTAGTCTCTCAAACAGAAAGCGTGTGGGATTTGACCTTTGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000485943.1
ENST00000678225.1
CDS CCA 90 bp GGCTGTGAGGACAGTGCCCACTTCTGCATTAGCTGGAAAGACATGTaGAGATTCTATCACCTGACAACACTTTTCTCCATCACTGCTTGT +
Preference number: 5 (lower is better)
Translates to: GCEDSAHFCISWKDM*RFYHLTTLFSITAC
Trigger: ACAAGCAGTGATGGAGAAAAGTGTTGTCAGGTGATAGAATCTCCACATGTCTTTCCAGCTAATGCAGAAGTGGGCACTGTCCTCACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACTTCCTGCACATCATGTaGCCTCATTTCCTCATTACT +
Preference number: 5 (lower is better)
Translates to: VWLLLVERARTFQHRSFNFLHIM*PHFLIT
Trigger: AGTAATGAGGAAATGAGGCAACATGATGTGCAGGAA...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp AGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGCAGTCTACCACAGTGGTACAAGTaGTCACAATCAAAAACTTCC +
Preference number: 5 (lower is better)
Translates to: SSGVIRSLYHLPLQRRSLPQWYK*SQSKTS
Trigger: GGAAGTTTTTGATTGTGACAACTTGTACCACTGTGG...TAGACTGCGTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACGGACAGGAGATGCTATaGTTTAAACCTGGGGATTCT +
Preference number: 5 (lower is better)
Translates to: TLTALASSEASIISLCKDGQEML*FKPGDS
Trigger: AGAATCCCCAGGTTTAAACAATAGCATCTCCTGTCC...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp TCAGGTGTTTTCATTGAGGCTACTCAGGAAACCGGTCAGGCTGCCCAGGACACCTTTCCTCTTGGTTATTaGTTGGTTCCAGCTAGATAT +
Preference number: 5 (lower is better)
Translates to: SGVFIEATQETGQAAQDTFPLGY*LVPARY
Trigger: ATATCTAGCTGGAACCAACAAATAACCAAGAGGAAA...GGTGTCCTGGGCAGCCTGACCGGTTTCCTGAGTAGCCTCAATGAAAACACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS GCA 90 bp AAGTGGGGACCCTGGGAAAAAGCAGTTATCTGTCTTTACCTTTGCTaGTTTAACCAGCCTGTCACAAGTTCCACAGTGGTACAAGTTGTC +
Preference number: 5 (lower is better)
Translates to: KWGPWEKAVICLYLC*FNQPVTSSTVVQVV
Trigger: GACAACTTGTACCACTGTGGAACTTGTGACAGGCTGGTTAAAGCAGCAAAGGTAAAGACAGATAACTGCTTTTTCCCAGGGTCCCCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427947.7
CDS-3UTR CAA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACCTGATTCCGCTTAAATaGGTGAATTCTCTAGGAGCA +
Preference number: 5 (lower is better)
Translates to: TLTALASSEASIISLCKDLIPLK*VNSLGA
Trigger: TGCTCCTAGAGAATTCACCAATTTAAGCGGAATCAG...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp ACACTTACAGCTCTGGCGTCATCAGAAGCCTCTATCATCTCCCTCTGCAAAGACTCTGGAGGAAGCATCTaGAAAATTTGCTGGTCATTC +
Preference number: 5 (lower is better)
Translates to: TLTALASSEASIISLCKDSGGSI*KICWSF
Trigger: GAATGACCAGCAAATTTTCAAGATGCTTCCTCCAGA...GTCTTTGCAGAGGGAGATGATAGAGGCTTCTGATGACGCCAGAGCTGTAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp GCTAGATATCGGAAGCCACTCGAACTTTTCGGGAAAGTATTTGGCAATTTCAATGTAGAGGAGAGAAACTaGCGCAGGCTCGTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: ARYRKPLELFGKVFGNFNVEERN*RRLVPR
Trigger: TCTGGGAACGAGCCTGCGCAAGTTTCTCTCCTCTAC...ATTGAAATTGCCAAATACTTTCCCGAAAAGTTCGAGTGGCTTCCGATATCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS TCA 90 bp CATGGCCCTGAGCGGTCTTCATATTCCTCTGCACTGAAATCACCTTaGGAAAGAAGTGAGTTCCCTCTCTCTAAATCTGAGTCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: HGPERSSYSSALKSP*ERSEFPLSKSESKA
Trigger: AGCTTTTGACTCAGATTTAGAGAGAGGGAACTCACTTCTTTCTCAAGGTGATTTCAGTGCAGAGGAATATGAAGACCGCTCAGGGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496298.5
CDS-3UTR CAA 90 bp GTGTGGCTCCTCCTCGTGGAAAGAGCTCGCACTTTTCAGCATCGCAGTTTTAACAAACCGGATACATTTTaGACTGCTACTGTTAGATCT +
Preference number: 5 (lower is better)
Translates to: VWLLLVERARTFQHRSFNKPDTF*TATVRS
Trigger: AGATCTAACAGTAGCAGTCAAAAATGTATCCGGTTT...GTTAAAACTGCGATGCTGAAAAGTGCGAGCTCTTTCCACGAGGAGGAGCCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CAATTTCAATCTTCTCCACGGGAAGACGATAGAAATCGGCAACTCTCTGCCTCACCTCTTGGTTATTTGTaGGTTCCAGCTAGATATCGG +
Preference number: 5 (lower is better)
Translates to: QFQSSPREDDRNRQLSASPLGYL*VPARYR
Trigger: CCGATATCTAGCTGGAACCAACAAATAACCAAGAGG...TGAGGCAGAGAGTTGCCGATTTCTATCGTCTTCCCGTGGAGAAGATTGAAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS-3UTR CAA 90 bp AATGCCCTAGAAGCAGTTCCTGAGGGTTTTGAGGCAGAAAGATTGGAAGACATGAAGTGGAACTCCTCTTaGTACAAGGGCAACAGAACT +
Preference number: 5 (lower is better)
Translates to: NALEAVPEGFEAERLEDMKWNSS*YKGNRT
Trigger: AGTTCTGTTGCCCTTGTACAAAGAGGAGTTCCACTT...CATGTCTTCCAATCTTTCTGCCTCAAAACCCTCAGGAACTGCTTCTAGGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS GCA 90 bp ACTAAAGAAGTTTCCAAAGCGCTGAAGAGGATTCGATTCAGTTCCTaGACATCATGTTGCCTCATTTCCTCATTACTGGTCCACCCAAAG +
Preference number: 5 (lower is better)
Translates to: TKEVSKALKRIRFSS*TSCCLISSLLVHPK
Trigger: CTTTGGGTGGACCAGTAATGAGGAAATGAGGCAACATGATGTGCAGGAACTGAATCGAATCCTCTTCAGCGCTTTGGAAACTTCTTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000427947.7
ENST00000450966.5
ENST00000484528.1
ENST00000678225.1
CDS-3UTR CAA 90 bp TTCAATCTTCTCCACGGGAAGACGATAGAAATCGGCAACTCTCTGCCTCAGGGATTTCCTCTTGGTTATTaGTTGGTTCCAGCTAGATAT +
Preference number: 5 (lower is better)
Translates to: FNLLHGKTIEIGNSLPQGFPLGY*LVPARY
Trigger: ATATCTAGCTGGAACCAACAAATAACCAAGAGGAAA...TCCCTGAGGCAGAGAGTTGCCGATTTCTATCGTCTTCCCGTGGAGAAGATTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS TCA 90 bp AGGAGATGCTATTGTTTAAACCTGGGGATTCTGGAGGAAGCATCTTaGAAATTTGCTGGTCATTCCTTTGGAAATCAGACTCAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: RRCYCLNLGILEEAS*KFAGHSFGNQTQPG
Trigger: TCCAGGCTGAGTCTGATTTCCAAAGGAATGACCAGCAAATTTTCAAGATGCTTCCTCCAGAATCCCCAGGTTTAAACAATAGCATCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000678225.1
CDS TCA 90 bp TTGGTTTGCAGTTCAATGTTAGCTGCATCCATTTCATTCAGTAAATaGCATGGAACCCCATATCTTGGATTAGCTCGAGCTTCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: LVCSSMLAASISFSK*HGTPYLGLARASGG
Trigger: ACCCCCTGAAGCTCGAGCTAATCCAAGATATGGGGTTCCATGTCATTTACTGAATGAAATGGATGCAGCTAACATTGAACTGCAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000678225.1
CDS CCA 90 bp TTGGCCGACTTTGCTGCTTTAACCAGCCTGTCACAAGTTCCACAGTaGTACAAGTTGTCACAATCAAAAACTTCCTCTTCTACATACATG +
Preference number: 5 (lower is better)
Translates to: LADFAALTSLSQVPQ*YKLSQSKTSSSTYM
Trigger: CATGTATGTAGAAGAGGAAGTTTTTGATTGTGACAACTTGTACCACTGTGGAACTTGTGACAGGCTGGTTAAAGCAGCAAAGTCGGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp TCGCTCCATTTCTTTATAATGAAGTGGAACTCCTCTTTGTACAAGGGCAACAGACAGTTCCTGAGGGTTTaGAGGCAGAAAGATTGGAAG +
Preference number: 5 (lower is better)
Translates to: SLHFFIMKWNSSLYKGNRQFLRV*RQKDWK
Trigger: CTTCCAATCTTTCTGCCTCAAAACCCTCAGGAACTG...TCTGTTGCCCTTGTACAAAGAGGAGTTCCACTTCATTATAAAGAAATGGAGCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS CCA 90 bp TTTTCCCTGATTGGCTGGACTTTAGAATCATTTATATCAAACCAGTaGGGACAGGAGATGCTATTGTTTAAACCTGGGGATTCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: FSLIGWTLESFISNQ*GQEMLLFKPGDSGG
Trigger: TCCTCCAGAATCCCCAGGTTTAAACAATAGCATCTCCTGTCCCCACTGGTTTGATATAAATGATTCTAAAGTCCAGCCAATCAGGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp CTTCTGGGGGAAGCTAATGTGGATGTTCTGCAAATATTTCCTTCACCAGAAGAAGCCAAGTCACTTTCTTaGCATCGGGTTTATCCTTAT +
Preference number: 5 (lower is better)
Translates to: LLGEANVDVLQIFPSPEEAKSLS*HRVYPY
Trigger: ATAAGGATAAACCCGATGCAAAGAAAGTGACTTGGC...TTCTTCTGGTGAAGGAAATATTTGCAGAACATCCACATTAGCTTCCCCCAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443711.2
CDS CCA 90 bp GTCTTTACCTTTGCTGCTTTAACCAGCCTGTCACAAGTTCCACAGTaGTACAAGTTGTCACAATCAAAAACTTCCTCTTCTACATACATG +
Preference number: 5 (lower is better)
Translates to: VFTFAALTSLSQVPQ*YKLSQSKTSSSTYM
Trigger: CATGTATGTAGAAGAGGAAGTTTTTGATTGTGACAACTTGTACCACTGTGGAACTTGTGACAGGCTGGTTAAAGCAGCAAAGGTAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427947.7
CDS-3UTR CAA 90 bp AGCAGTAGCAGTATTGTACTTGGAAAACTGATTCTTTCTCGGAAGGCAAATTCCCTGATTCCGCTTAAATaGGTGAATTCTCTAGGAGCA +
Preference number: 5 (lower is better)
Translates to: SSSSIVLGKLILSRKANSLIPLK*VNSLGA
Trigger: TGCTCCTAGAGAATTCACCAATTTAAGCGGAATCAG...GGAATTTGCCTTCCGAGAAAGAATCAGTTTTCCAAGTACAATACTGCTACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443711.2
CDS-3UTR CAA 90 bp TTCTCAGAAGTCAGTGAGATGATATCAAATGCCCTAGAAGCAGTTCCTGAGGGTGAAGTTCTTTCAGTGTaGCATCTTCTTCACATAAAG +
Preference number: 5 (lower is better)
Translates to: FSEVSEMISNALEAVPEGEVLSV*HLLHIK
Trigger: CTTTATGTGAAGAAGATGCAACACTGAAAGAACTTC...ACCCTCAGGAACTGCTTCTAGGGCATTTGATATCATCTCACTGACTTCTGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS-3UTR CAA 90 bp TTAGAATTGGATGAAGTCTCAATATTCTGGTACGTGGTGATAAATGGGGCCCCTACAACATGCTTGTACTaGTCTATGTTCCTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: LELDEVSIFWYVVINGAPTTCLY*SMFLLR
Trigger: TCTGAGAAGGAACATAGACAAGTACAAGCATGTTGT...AGGGGCCCCATTTATCACCACGTACCAGAATATTGAGACTTCATCCAATTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS GCA 90 bp AGACATGTGGAGATTCTATCACCTGACAACACTTTTCTCCATCACTaGTTGTGTCTAGATGAAGAACATTTAAAAGTAGAGGTTCGCAGT +
Preference number: 5 (lower is better)
Translates to: RHVEILSPDNTFLHH*LCLDEEHLKVEVRS
Trigger: ACTGCGAACCTCTACTTTTAAATGTTCTTCATCTAGACACAAGCAGTGATGGAGAAAAGTGTTGTCAGGTGATAGAATCTCCACATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000678225.1
CDS-3UTR CAA 90 bp TTAGAATTGGATGAAGTCTCAATATTCTGGTACGTGGTGATAAATGGGGCCCCTAGTAAGACAACATGCTaGTACTTGTCTATGTTCCTT +
Preference number: 5 (lower is better)
Translates to: LELDEVSIFWYVVINGAPSKTTC*YLSMFL
Trigger: AAGGAACATAGACAAGTACAAGCATGTTGTCTTACT...AGGGGCCCCATTTATCACCACGTACCAGAATATTGAGACTTCATCCAATTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS TCA 90 bp TTGGTTTGCAGTTCAATGTTAGCTGCATCCATTTCATTCAGTAAATaGCATGGAACCCCATATCTTGGATTAGCTCGAGCTCTAATAAGA +
Preference number: 5 (lower is better)
Translates to: LVCSSMLAASISFSK*HGTPYLGLARALIR
Trigger: TCTTATTAGAGCTCGAGCTAATCCAAGATATGGGGTTCCATGTCATTTACTGAATGAAATGGATGCAGCTAACATTGAACTGCAAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485943.1
CDS TCA 90 bp GTGTTACATGTTTATAAAGCAGTAGCAGTATTGTACTTGGAAAACTaGTTCTTTCTCGGAAGGCAAATTCCATTACCCATAGGGTATAGG +
Preference number: 5 (lower is better)
Translates to: VLHVYKAVAVLYLEN*FFLGRQIPLPIGYR
Trigger: CCTATACCCTATGGGTAATGGAATTTGCCTTCCGAGAAAGAATCAGTTTTCCAAGTACAATACTGCTACTGCTTTATAAACATGTAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443711.2
CDS TCA 90 bp TTATTCTCCTCCTCTAATAAGATTGCTTTTAGAATCATCAGTGGATaGTCAATCTCTTCTTCACTCTGGAGATCTTTCAGATTCACATCT +
Preference number: 5 (lower is better)
Translates to: LFSSSNKIAFRIISG*SISSSLWRSFRFTS
Trigger: AGATGTGAATCTGAAAGATCTCCAGAGTGAAGAAGAGATTGATCATCCACTGATGATTCTAAAAGCAATCTTATTAGAGGAGGAGAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678225.1
CDS CCA 72 bp CTGGCCAAAACGCGAAGCGAACGAACCCGCCCCAACTaGGCGCCGCCATGTTGGCGAGGGCGGGTCTCCAGA +
Preference number: 6 (lower is better)
Translates to: LAKTRSERTRPN*APPCWRGRVSR
Trigger: TCTGGAGACCCGCCCTCGCCAACATGGCGGCGCCCAGTTGGGGCGGGTTCGTTCGCTTCGCGTTTTGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251722.10
ENST00000484528.1
ENST00000678225.1
CDS CCA 72 bp TTTCCGGGGCTCGGGGCCGGGCAGGCGTCTCTGCACTaGAGAGGATGTAGCTGCTCTGCTCATGGAGGGCTT +
Preference number: 6 (lower is better)
Translates to: FPGLGAGQASLH*RGCSCSAHGGL
Trigger: AAGCCCTCCATGAGCAGAGCAGCTACATCCTCTCCAGTGCAGAGACGCCTGCCCGGCCCCGAGCCCCGGAAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000483519.5
ENST00000678225.1
CDS TCA 72 bp TCATCGGGAGTAGAGCCGTGCAGCGGCGCGGTTATCTaGAGCTCCCCACGTGGATGGAGAGAGAAGTTTCCG +
Preference number: 6 (lower is better)
Translates to: SSGVEPCSGAVI*SSPRGWREKFP
Trigger: CGGAAACTTCTCTCTCCATCCACGTGGGGAGCTTCAGATAACCGCGCCGCTGCACGGCTCTACTCCCGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000450966.5
ENST00000483519.5
ENST00000678225.1
CDS CAA 72 bp AGCCCTTGCTCCCTGAACGTCTTCCTCATGTCTTCCTaGGGGATGGCCGTCCAACCCTCCCCACCTGGACAT +
Preference number: 6 (lower is better)
Translates to: SPCSLNVFLMSS*GMAVQPSPPGH
Trigger: ATGTCCAGGTGGGGAGGGTTGGACGGCCATCCCCAAGGAAGACATGAGGAAGACGTTCAGGGAGCAAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000678225.1
CDS CAA 90 bp CCATTTCTGAGCCCTTGCTCCCTGAACGTCTTCCTCATGTCTTCCTaGGGGATGGCCGTCCAACCCTCCCCACCTGGACATCCAGCACTG +
Preference number: 6 (lower is better)
Translates to: PFLSPCSLNVFLMSS*GMAVQPSPPGHPAL
Trigger: CAGTGCTGGATGTCCAGGTGGGGAGGGTTGGACGGCCATCCCCAAGGAAGACATGAGGAAGACGTTCAGGGAGCAAGGGCTCAGAAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000678225.1
CDS CCA 72 bp AGTGTCCTGAGGGACCCTGAAGCTGGTACCACCAGATaGGCACCTTCAGGAAACCCAGAGGAGGAAGTTGTC +
Preference number: 6 (lower is better)
Translates to: SVLRDPEAGTTR*APSGNPEEEVV
Trigger: GACAACTTCCTCCTCTGGGTTTCCTGAAGGTGCCCATCTGGTGGTACCAGCTTCAGGGTCCCTCAGGACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251722.10
ENST00000409945.1
ENST00000427112.6
ENST00000430158.5
ENST00000450966.5
ENST00000678225.1
CDS CCA 72 bp TGGCTCTCCAAACTCTGCCCCAAGACGAAGTACAGTTaGTCTGGTCCTGATGACTCTCCCAGTGTCCTGAGG +
Preference number: 6 (lower is better)
Translates to: WLSKLCPKTKYS*SGPDDSPSVLR
Trigger: CCTCAGGACACTGGGAGAGTCATCAGGACCAGACCAACTGTACTTCGTCTTGGGGCAGAGTTTGGAGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251722.10
ENST00000409945.1
ENST00000427112.6
ENST00000430158.5
ENST00000450966.5
ENST00000678225.1
CDS GCA 72 bp CAGAAGCACCTTGGCTGGAAGTGGCTCTCCAAACTCTaGCCCAAGACGAAGTACAGTTGGTCTGGTCCTGAT +
Preference number: 6 (lower is better)
Translates to: QKHLGWKWLSKL*PKTKYSWSGPD
Trigger: ATCAGGACCAGACCAACTGTACTTCGTCTTGGGGCAGAGTTTGGAGAGCCACTTCCAGCCAAGGTGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000430158.5
ENST00000450966.5
ENST00000678225.1
CDS CCA 72 bp GCAAGGTCATGGCCTGAGACTTCAGCTCCGCCAGCGTaGCATCTTCTGAGATCTCTATGTCTCCCAAGTAGA +
Preference number: 6 (lower is better)
Translates to: ARSWPETSAPPA*HLLRSLCLPSR
Trigger: TCTACTTGGGAGACATAGAGATCTCAGAAGATGCCACGCTGGCGGAGCTGAAGTCTCAGGCCATGACCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000430158.5
ENST00000450966.5
ENST00000473191.1
ENST00000678225.1
CDS CCA 72 bp TTCTTTCCCTTCAGCTCCAGAAGCTTCCACTGCGAGTaGCCAAACAGGGGGACTTTAAAGGGCTACCAGGCA +
Preference number: 6 (lower is better)
Translates to: FFPFSSRSFHCE*PNRGTLKGYQA
Trigger: TGCCTGGTAGCCCTTTAAAGTCCCCCTGTTTGGCCACTCGCAGTGGAAGCTTCTGGAGCTGAAGGGAAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464956.1
CDS GCA 72 bp TGTTCTCACCTTGGCTGGAAGTGGCTCTCCAAACTCTaGCCCAAGACGAAGTACAGTTGGTCTGGTCCTGAT +
Preference number: 6 (lower is better)
Translates to: CSHLGWKWLSKL*PKTKYSWSGPD
Trigger: ATCAGGACCAGACCAACTGTACTTCGTCTTGGGGCAGAGTTTGGAGAGCCACTTCCAGCCAAGGTGAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS TCA 72 bp TCATTTCCTCATTACTGGTCCACCCAAAGCTGTCAGTaGGGTCTGCTGTGGATGCAGCTTCCTGGTCTAAGA +
Preference number: 6 (lower is better)
Translates to: SFPHYWSTQSCQ*GLLWMQLPGLR
Trigger: TCTTAGACCAGGAAGCTGCATCCACAGCAGACCTCACTGACAGCTTTGGGTGGACCAGTAATGAGGAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000427947.7
ENST00000450966.5
ENST00000484528.1
ENST00000678225.1
CDS TCA 72 bp TTTCTGTTTGAGAGACTACTGGGTGCAGAGCCCCATTaGAGAAATGATACTGAGGGCCCAGGTGAAGATGCA +
Preference number: 6 (lower is better)
Translates to: FLFERLLGAEPH*RNDTEGPGEDA
Trigger: TGCATCTTCACCTGGGCCCTCAGTATCATTTCTTCAATGGGGCTCTGCACCCAGTAGTCTCTCAAACAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000485943.1
ENST00000678225.1
CDS TCA 72 bp GTCATGGCCCTGAGCGGTCTTCATATTCCTCTGCACTaGAATCACCTTGAGAAAGAAGTGAGTTCCCTCTCT +
Preference number: 6 (lower is better)
Translates to: VMALSGLHIPLH*NHLEKEVSSLS
Trigger: AGAGAGGGAACTCACTTCTTTCTCAAGGTGATTTCAGTGCAGAGGAATATGAAGACCGCTCAGGGCCATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496298.5
CDS CCA 72 bp GGTCAAATCCCACACGCTTTCTGTTTGAGAGACTACTaGGTGCAGAGCCCCATTGAAGAAATGATACTGAGG +
Preference number: 6 (lower is better)
Translates to: GQIPHAFCLRDY*VQSPIEEMILR
Trigger: CCTCAGTATCATTTCTTCAATGGGGCTCTGCACCCAGTAGTCTCTCAAACAGAAAGCGTGTGGGATTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000485943.1
ENST00000678225.1
CDS CCA 72 bp ATATCAGAACAGACTGAGACTTCAGCTCCGCCAGCGTaGCATCTTCTGAGATCTCTATGTCTCCCAAGTAGA +
Preference number: 6 (lower is better)
Translates to: ISEQTETSAPPA*HLLRSLCLPSR
Trigger: TCTACTTGGGAGACATAGAGATCTCAGAAGATGCCACGCTGGCGGAGCTGAAGTCTCAGTCTGTTCTGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS TCA 72 bp GACCGGAGGTCCCAACTAAAGAAGTTTCCAAAGCGCTaGAGAGGATTCGATTCAGTTCCTGCACATCATGTT +
Preference number: 6 (lower is better)
Translates to: DRRSQLKKFPKR*RGFDSVPAHHV
Trigger: AACATGATGTGCAGGAACTGAATCGAATCCTCTTCAGCGCTTTGGAAACTTCTTTAGTTGGGACCTCCGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000427947.7
ENST00000450966.5
ENST00000484528.1
ENST00000678225.1
CDS TCA 72 bp ACATTTAAAAGTAGAGGTTCGCAGTCAATACCAGTTTaGATGTGGACTCCACCAACCTCCACCCCATTCCAC +
Preference number: 6 (lower is better)
Translates to: TFKSRGSQSIPV*MWTPPTSTPFH
Trigger: GTGGAATGGGGTGGAGGTTGGTGGAGTCCACATTCAAACTGGTATTGACTGCGAACCTCTACTTTTAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000678225.1
CDS TCA 72 bp AAAGGAGGCAAGGTCATGGCCACTGAACATGGCATATaGCAAATGCCATATCAGAACAGACTGAGACTTCAG +
Preference number: 6 (lower is better)
Translates to: KGGKVMATEHGI*QMPYQNRLRLQ
Trigger: CTGAAGTCTCAGTCTGTTCTGATATGGCATTTGTCATATGCCATGTTCAGTGGCCATGACCTTGCCTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450940.5
CDS GCA 72 bp GTTTCCAAAGCGCTGAAGAGGATTCGATTCAGTTCCTaGACATCATGTTGCCTCATTTCCTCATTACTGGTC +
Preference number: 6 (lower is better)
Translates to: VSKALKRIRFSS*TSCCLISSLLV
Trigger: GACCAGTAATGAGGAAATGAGGCAACATGATGTGCAGGAACTGAATCGAATCCTCTTCAGCGCTTTGGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000427947.7
ENST00000450966.5
ENST00000484528.1
ENST00000678225.1
CDS GCA 72 bp AAACCTGGGGATTCTGGAGGAAGCATCTTGAAAATTTaGTGGTCATTCCTTTGGAAATCAGACTCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: KPGDSGGSILKI*WSFLWKSDSAW
Trigger: CCAGGCTGAGTCTGATTTCCAAAGGAATGACCAGCAAATTTTCAAGATGCTTCCTCCAGAATCCCCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000678225.1
CDS CCA 72 bp GACAGTGCCCACTTCTGCATTAGCTGGAAAGACATGTaGAGATTCTATCACCTGACAACACTTTTCTCCATC +
Preference number: 6 (lower is better)
Translates to: DSAHFCISWKDM*RFYHLTTLFSI
Trigger: GATGGAGAAAAGTGTTGTCAGGTGATAGAATCTCCACATGTCTTTCCAGCTAATGCAGAAGTGGGCACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000678225.1
CDS CCA 72 bp GCACAGGCAGTCAATTTACTTCTCTTTATGATGCACTaGCTGCTGAAATCCCATTCTGTTCTCACCTTGGCT +
Preference number: 6 (lower is better)
Translates to: AQAVNLLLFMMH*LLKSHSVLTLA
Trigger: AGCCAAGGTGAGAACAGAATGGGATTTCAGCAGCCAGTGCATCATAAAGAGAAGTAAATTGACTGCCTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409945.1
CDS CAA 90 bp CAGGAGATGCTATTGTTTAAACCTGGGGATTCTGGAGGAAGCATCTaGAAAATTTGCTGGTCATTCCTTTGGAAATCAGACTCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: QEMLLFKPGDSGGSI*KICWSFLWKSDSAW
Trigger: CCAGGCTGAGTCTGATTTCCAAAGGAATGACCAGCAAATTTTCAAGATGCTTCCTCCAGAATCCCCAGGTTTAAACAATAGCATCTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000678225.1
CDS TCA 72 bp CTTTTATCAAAGGTCAAATCCCACACGCTTTCTGTTTaGGAGACTACTGGGTGCAGAGCCCCATTGAAGAAA +
Preference number: 6 (lower is better)
Translates to: LLSKVKSHTLSV*ETTGCRAPLKK
Trigger: TTTCTTCAATGGGGCTCTGCACCCAGTAGTCTCTCAAACAGAAAGCGTGTGGGATTTGACCTTTGATAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000485943.1
ENST00000678225.1
CDS TCA 72 bp GAGCGGTCTTCATATTCCTCTGCACTGAAATCACCTTaGGAAAGAAGTGAGTTCCCTCTCTCTAAATCTGAG +
Preference number: 6 (lower is better)
Translates to: ERSSYSSALKSP*ERSEFPLSKSE
Trigger: CTCAGATTTAGAGAGAGGGAACTCACTTCTTTCTCAAGGTGATTTCAGTGCAGAGGAATATGAAGACCGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496298.5
CDS CAA 72 bp TCTTTTATCAAAGGTCAAATCCCACACGCTTTCTGTTaGAGAGACTACTGGGTGCAGAGCCCCATTGAAGAA +
Preference number: 6 (lower is better)
Translates to: SFIKGQIPHAFC*RDYWVQSPIEE
Trigger: TTCTTCAATGGGGCTCTGCACCCAGTAGTCTCTCAAACAGAAAGCGTGTGGGATTTGACCTTTGATAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000485943.1
ENST00000678225.1
CDS TCA 72 bp CGAACTGTACTTTCATCTGAACTGAGTAGAAATATCTaGGAATGGAGCTGTAAGAACTTCCGCAGTGGTCCA +
Preference number: 6 (lower is better)
Translates to: RTVLSSELSRNI*EWSCKNFRSGP
Trigger: TGGACCACTGCGGAAGTTCTTACAGCTCCATTCTCAGATATTTCTACTCAGTTCAGATGAAAGTACAGTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000678225.1
CDS TCA 72 bp GCATTAGCTGGAAAGACATGTGGAGATTCTATCACCTaGCAACACTTTTCTCCATCACTGCTTGTGTCTAGA +
Preference number: 6 (lower is better)
Translates to: ALAGKTCGDSIT*QHFSPSLLVSR
Trigger: TCTAGACACAAGCAGTGATGGAGAAAAGTGTTGTCAGGTGATAGAATCTCCACATGTCTTTCCAGCTAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000678225.1
CDS GCA 72 bp AGGGCCCAGGTGAAGATGCAATTCAAAAGTATTGTTTaGAGAATCACATTCTGCCCTTTTGGTTTGCAGTTC +
Preference number: 6 (lower is better)
Translates to: RAQVKMQFKSIV*RITFCPFGLQF
Trigger: GAACTGCAAACCAAAAGGGCAGAATGTGATTCTGCAAACAATACTTTTGAATTGCATCTTCACCTGGGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000485943.1
ENST00000678225.1
CDS CAA 72 bp TCATTTATATCAAACCAGTGGGGACAGGAGATGCTATaGTTTAAACCTGGGGATTCTGGAGGAAGCATCTTG +
Preference number: 6 (lower is better)
Translates to: SFISNQWGQEML*FKPGDSGGSIL
Trigger: CAAGATGCTTCCTCCAGAATCCCCAGGTTTAAACAATAGCATCTCCTGTCCCCACTGGTTTGATATAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000678225.1
CDS CAA 90 bp TTTGCTGCTTTAACCAGCCTGTCACAAGTTCCACAGTGGTACAAGTaGTCACAATCAAAAACTTCCTCTTCTACATACATGTTCCAGAGA +
Preference number: 6 (lower is better)
Translates to: FAALTSLSQVPQWYK*SQSKTSSSTYMFQR
Trigger: TCTCTGGAACATGTATGTAGAAGAGGAAGTTTTTGATTGTGACAACTTGTACCACTGTGGAACTTGTGACAGGCTGGTTAAAGCAGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000427947.7
ENST00000450966.5
ENST00000678225.1
CDS TCA 72 bp TATTGTTTAAACCTGGGGATTCTGGAGGAAGCATCTTaGAAATTTGCTGGTCATTCCTTTGGAAATCAGACT +
Preference number: 6 (lower is better)
Translates to: YCLNLGILEEAS*KFAGHSFGNQT
Trigger: AGTCTGATTTCCAAAGGAATGACCAGCAAATTTTCAAGATGCTTCCTCCAGAATCCCCAGGTTTAAACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000678225.1
CDS TCA 72 bp TCCTCTAATAAGATTGCTTTTAGAATCATCAGTGGATaGTCAATCTCTTCTTCACTCTGGAGATCTTTCAGA +
Preference number: 6 (lower is better)
Translates to: SSNKIAFRIISG*SISSSLWRSFR
Trigger: TCTGAAAGATCTCCAGAGTGAAGAAGAGATTGATCATCCACTGATGATTCTAAAAGCAATCTTATTAGAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251722.10
ENST00000427112.6
ENST00000450966.5
ENST00000678225.1