RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000114316

Ensembl transcript IDs: ENST00000265560.9, ENST00000351842.8, ENST00000415188.1, ENST00000416417.5, ENST00000431357.1, ENST00000461553.1, ENST00000462673.1, ENST00000464168.5, ENST00000483212.1, ENST00000485450.5, ENST00000486549.5, ENST00000488520.5, ENST00000491791.1

Found 491 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTTGGCGAGTCGGCAGCCACGTCCTTGTCCTCACCCGCAGCGCAGTaGCGCCGACCCATCCAACGGTCATCGCATGCGCGTGCCCCGCGC +
Preference number: 1 (lower is better)
Translates to: FGESAATSLSSPAAQ*RRPIQRSSHARAPR
Trigger: GCGCGGGGCACGCGCATGCGATGACCGTTGGATGGGTCGGCGTCACTGCGCTGCGGGTGAGGACAAGGACGTGGCTGCCGACTCGCCAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR GCA 90 bp ACAGGGTGGCAGGATCGTGGAGTCAGCATTAGTTGGTGTCCATGCTaGAAGCCTCATCATCCCCAAAGCCCTGCTGAGAGCTGCTTGGTC +
Preference number: 1 (lower is better)
Translates to: TGWQDRGVSISWCPC*KPHHPQSPAESCLV
Trigger: GACCAAGCAGCTCTCAGCAGGGCTTTGGGGATGATGAGGCTTGCAGCATGGACACCAACTAATGCTGACTCCACGATCCTGCCACCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431357.1
3UTR CCA 90 bp TACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTCAGCATTAGTTaGTGTCCATGCTGCAAGCCTCATCATCCCCAAAGCCCTGCTGAG +
Preference number: 1 (lower is better)
Translates to: YTGATGWQDRGVSIS*CPCCKPHHPQSPAE
Trigger: CTCAGCAGGGCTTTGGGGATGATGAGGCTTGCAGCATGGACACCAACTAATGCTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431357.1
3UTR CCA 90 bp AGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTaGCAGGATCGTGGAGTCAGCATTAGTTGGTGTCCATGCTGCAAG +
Preference number: 1 (lower is better)
Translates to: SVKDVLLGDYTGATG*QDRGVSISWCPCCK
Trigger: CTTGCAGCATGGACACCAACTAATGCTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431357.1
3UTR CCA 90 bp CATATCAGTGCACATAGCGAGGGAAAGGGGAGTTTACTTGAGGTTTaGGTTACTGTGAGCAGACTACTTGGGGTGACTAGTATTGGCATC +
Preference number: 1 (lower is better)
Translates to: HISAHSEGKGSLLEV*VTVSRLLGVTSIGI
Trigger: GATGCCAATACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCAAACCTCAAGTAAACTCCCCTTTCCCTCGCTATGTGCACTGATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR GCA 90 bp GAAGGGTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTaGAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTA +
Preference number: 1 (lower is better)
Translates to: EGYFLVWFLDRTLAV*RVSKMFSWGITLAL
Trigger: TAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATACCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
3UTR TCA 90 bp AAGCATCTGGGTAACACCAAAATGTATTACTACCCTAAATCGCCATaGACTGGAGCCCTTTCCCGGCTAACTCCCACAAAGATTTCTGTT +
Preference number: 1 (lower is better)
Translates to: KHLGNTKMYYYPKSP*TGALSRLTPTKISV
Trigger: AACAGAAATCTTTGTGGGAGTTAGCCGGGAAAGGGCTCCAGTTCATGGCGATTTAGGGTAGTAATACATTTTGGTGTTACCCAGATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR-3UTR GCA 90 bp CGAGTCGGCAGCCACGTCCTTGTCCTCACCCGCAGCGCAGTGACGCCGACCCATCCAACGGTCATCGCATaGGCGTGCCCCGCGCAGGCC +
Preference number: 2 (lower is better)
Translates to: RVGSHVLVLTRSAVTPTHPTVIA*ACPAQA
Trigger: GGCCTGCGCGGGGCACGCGCATGCGATGACCGTTGG...ATGGGTCGGCGTCACTGCGCTGCGGGTGAGGACAAGGACGTGGCTGCCGACTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR-3UTR GCA 90 bp CCACGTCCTTGTCCTCACCCGCAGCGCAGTGACGCCGACCCATCCAACGGTCATGGTGGGTCTCCAGGCTaGTCCATACTCAGCGCCTGT +
Preference number: 2 (lower is better)
Translates to: PRPCPHPQRSDADPSNGHGGSPG*SILSAC
Trigger: ACAGGCGCTGAGTATGGAGCAGCCTGGAGACCCACC...ATGACCGTTGGATGGGTCGGCGTCACTGCGCTGCGGGTGAGGACAAGGACGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR-3UTR CCA 90 bp TTAAGGCCTTGCCCACACGCAGCGGCTGGCCCCGCGGTGGGAGTGGGGACGGGGTCAAAGATGTTCTCCTaGGGGATTACACTGGCGCTA +
Preference number: 2 (lower is better)
Translates to: LRPCPHAAAGPAVGVGTGSKMFS*GITLAL
Trigger: TAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGA...CCCCGTCCCCACTCCCACCGCGGGGCCAGCCGCTGCGTGTGGGCAAGGCCTTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR-3UTR TCA 90 bp TTAAGGCCTTGCCCACACGCAGCGGCTGGCCCCGCGGTGGGAGTGGGGACGGGGCTGGAAATTACAAGATaGCTCAACGGAGAAATGGGC +
Preference number: 2 (lower is better)
Translates to: LRPCPHAAAGPAVGVGTGLEITR*LNGEMG
Trigger: GCCCATTTCTCCGTTGAGTCATCTTGTAATTTCCAG...CCCCGTCCCCACTCCCACCGCGGGGCCAGCCGCTGCGTGTGGGCAAGGCCTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR-3UTR TCA 90 bp CCACGTCCTTGTCCTCACCCGCAGCGCAGTGACGCCGACCCATCCAACGGTCATTACCCTAAATCGCCATaGACTGGAGCCCTTTCCCGG +
Preference number: 2 (lower is better)
Translates to: PRPCPHPQRSDADPSNGHYPKSP*TGALSR
Trigger: CCGGGAAAGGGCTCCAGTTCATGGCGATTTAGGGTA...ATGACCGTTGGATGGGTCGGCGTCACTGCGCTGCGGGTGAGGACAAGGACGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR-3UTR TCA 90 bp CACCCGCAGCGCAGTGACGCCGACCCATCCAACGGTCATCGCATGCGCGTGCCCAAAGGGGAGTTTACTTaGGGTTTGGGTTACTGTGAG +
Preference number: 2 (lower is better)
Translates to: HPQRSDADPSNGHRMRVPKGEFT*GLGYCE
Trigger: CTCACAGTAACCCAAACCTCAAGTAAACTCCCCTTT...GGGCACGCGCATGCGATGACCGTTGGATGGGTCGGCGTCACTGCGCTGCGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR-3UTR CCA 90 bp CGAGTCGGCAGCCACGTCCTTGTCCTCACCCGCAGCGCAGTGACGCCGACCCATGTTCTCAAGCCAACATaGAAACAACTAGACGGGACA +
Preference number: 2 (lower is better)
Translates to: RVGSHVLVLTRSAVTPTHVLKPT*KQLDGT
Trigger: TGTCCCGTCTAGTTGTTTCCATGTTGGCTTGAGAAC...ATGGGTCGGCGTCACTGCGCTGCGGGTGAGGACAAGGACGTGGCTGCCGACTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR-3UTR CCA 90 bp AAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAACTGGCGCTACAGGGTaGCAGGATCGTGGAGTCAGC +
Preference number: 2 (lower is better)
Translates to: KDVLLGDYTGATGWQDRGTGATG*QDRGVS
Trigger: GCTGACTCCACGATCCTGCCACCCTGTAGCGCCAGT...TCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
3UTR-3UTR TCA 90 bp GTCTCCAGGCTGCTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCTCAGACATACTCCATTaGGTACCCCCATCCCACCCC +
Preference number: 2 (lower is better)
Translates to: VSRLLHTQRLCSSPFFGISDILH*VPPSHP
Trigger: GGGGTGGGATGGGGGTACTCAATGGAGTATGTCTGA...GATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAGCAGCCTGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
3UTR-3UTR CCA 90 bp AAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGCTGCTGAGAGCTGCTTaGTCGTGTCCCTCCATCAGA +
Preference number: 2 (lower is better)
Translates to: KMFSWGITLALQGGRIVELLRAA*SCPSIR
Trigger: TCTGATGGAGGGACACGACCAAGCAGCTCTCAGCAG...CTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431357.1
3UTR-3UTR CCA 90 bp TCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCCCCATCCCACCACTGGCGCTACAGGGTaGCAGGATCGTGGAGTCAGC +
Preference number: 2 (lower is better)
Translates to: SPFFGIHQTYSIEYPHPTTGATG*QDRGVS
Trigger: GCTGACTCCACGATCCTGCCACCCTGTAGCGCCAGT...GGTGGGATGGGGGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
3UTR-3UTR TCA 90 bp CACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGCAGAGACCAGCCTGGCCATaGGGTCAGGAGTTCAAGACA +
Preference number: 2 (lower is better)
Translates to: HTTTYPFSVKNHKADQAQRPAWP*GQEFKT
Trigger: TGTCTTGAACTCCTGACCTCATGGCCAGGCTGGTCT...CTGCGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
3UTR-3UTR CCA 90 bp ACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTACTGGCGCTACAGGGTaGCAGGATCGTGGAGTCAGC +
Preference number: 2 (lower is better)
Translates to: TQRLCSSPFFGIHQTYSITGATG*QDRGVS
Trigger: GCTGACTCCACGATCCTGCCACCCTGTAGCGCCAGT...AATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
3UTR-3UTR CCA 90 bp GAGGTTTGGGTTACTGTGAGCAGACTACTTGGGGTGACTAGTATTGGCATCAGACCTGGGGGATTACACTaGCGCTACAGGGTGGCAGGA +
Preference number: 2 (lower is better)
Translates to: EVWVTVSRLLGVTSIGIRPGGLH*RYRVAG
Trigger: TCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGG...TCTGATGCCAATACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCAAACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
3UTR-3UTR TCA 90 bp AACTCCCACAAAGATTTCTGTTCTCAAGCCAACATGGAAACAACTAGACGGGACGGTTCCACAGGAGGTTaGGGGGCCAGGATCCCCAAC +
Preference number: 2 (lower is better)
Translates to: NSHKDFCSQANMETTRRDGSTGG*GARIPN
Trigger: GTTGGGGATCCTGGCCCCTCAACCTCCTGTGGAACC...GTCCCGTCTAGTTGTTTCCATGTTGGCTTGAGAACAGAAATCTTTGTGGGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR-3UTR TCA 90 bp TCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCAGGCAGATTGCCTaGGCTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: SCHISPHHHIPFQCEKPQGRQIA*AQEFET
Trigger: GGTCTCGAACTCCTGAGCTCAGGCAATCTGCCTGCC...TTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
3UTR-3UTR CCA 90 bp CCACGTCCTTGTCCTCACCCGCAGCGCAGTGACGCCGACCCATCCAACGGTCATGTTCTAGAAAGCATCTaGGTAACACCAAAATGTATT +
Preference number: 2 (lower is better)
Translates to: PRPCPHPQRSDADPSNGHVLESI*VTPKCI
Trigger: AATACATTTTGGTGTTACCCAGATGCTTTCTAGAAC...ATGACCGTTGGATGGGTCGGCGTCACTGCGCTGCGGGTGAGGACAAGGACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR-3UTR CCA 90 bp GGGTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCACCTGGGGGATTACACTaGCGCTACAGGGTGGCAGGA +
Preference number: 2 (lower is better)
Translates to: GYFLVWFLDRTLAVCRVSPGGLH*RYRVAG
Trigger: TCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGG...TGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
3UTR-3UTR CCA 90 bp CGAATGGGGGCCCCGGGAAGAGTCTTGGCAGGGATGAGGAAAGAACCCGTTCTAAGTTTACTTGAGGTTTaGGTTACTGTGAGCAGACTA +
Preference number: 2 (lower is better)
Translates to: RMGAPGRVLAGMRKEPVLSLLEV*VTVSRL
Trigger: TAGTCTGCTCACAGTAACCCAAACCTCAAGTAAACT...TAGAACGGGTTCTTTCCTCATCCCTGCCAAGACTCTTCCCGGGGCCCCCATTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR-3UTR CCA 90 bp TGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTCAGGGGTATTTCCTTGTCTaGTTTTTAGACAGAACACTA +
Preference number: 2 (lower is better)
Translates to: CSPGGLHWRYRVAGSWSQGYFLV*FLDRTL
Trigger: TAGTGTTCTGTCTAAAAACCAGACAAGGAAATACCC...CTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
3UTR-3UTR CCA 90 bp GTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGAATACAAAATTAGGCTaGGTGAGGTGGCTCACCCTT +
Preference number: 2 (lower is better)
Translates to: VHTTTYPFSVKNHKADQANTKLG*VRWLTL
Trigger: AAGGGTGAGCCACCTCACCCAGCCTAATTTTGTATT...CGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416417.5
3UTR-3UTR TCA 90 bp CAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGACCAGAACTGCTAAGTaGAGGTGTCTTATAAAATTC +
Preference number: 2 (lower is better)
Translates to: QRCSPGGLHWRYRVAGSWTRTAK*RCLIKF
Trigger: GAATTTTATAAGACACCTTCACTTAGCAGTTCTGGT...CCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431357.1
3UTR-3UTR CCA 90 bp ACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTTCAAAGATGTTCTCCTaGGGGATTACACTGGCGCTA +
Preference number: 2 (lower is better)
Translates to: TQRLCSSPFFGIHQTYSISKMFS*GITLAL
Trigger: TAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGA...AATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
3UTR-3UTR TCA 90 bp TCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGAGTTCAAGACACAGTaGAACCACATCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: SVHTTTYPFSVKNHKADQEFKTQ*NHISTK
Trigger: TTTAGTAGAGATGTGGTTTCACTGTGTCTTGAACTC...CTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
3UTR-3UTR CCA 90 bp CATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCGGGTATTTCCTTGTCTaGTTTTTAGACAGAACACTA +
Preference number: 2 (lower is better)
Translates to: HTQRLCSSPFFGIHQTYSGYFLV*FLDRTL
Trigger: TAGTGTTCTGTCTAAAAACCAGACAAGGAAATACCC...GGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
3UTR-3UTR CCA 90 bp TCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAAATACAAAAATTATCTaGACATGGTGGCGGGCGCCT +
Preference number: 2 (lower is better)
Translates to: SCHISPHHHIPFQCEKPQNTKII*TWWRAP
Trigger: AGGCGCCCGCCACCATGTCCAGATAATTTTTGTATT...TTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000416417.5
3UTR-3UTR CAA 90 bp AGTGACGCCGACCCATCCAACGGTCATCGCATGCGCGTGCCCCGCGCAGGCCCCGGGTTCCACAGGAGGTaGAGGGGCCAGGATCCCCAA +
Preference number: 3 (lower is better)
Translates to: SDADPSNGHRMRVPRAGPGFHRR*RGQDPQ
Trigger: TTGGGGATCCTGGCCCCTCAACCTCCTGTGGAACCC...GGGGCCTGCGCGGGGCACGCGCATGCGATGACCGTTGGATGGGTCGGCGTCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR GCA 72 bp GTGACGCCGACCCATCCAACGGTCATCGCATGCGCGTaGCCCGCGCAGGCCCCAAACCCCCACGGATTAGGT +
Preference number: 3 (lower is better)
Translates to: VTPTHPTVIACA*PAQAPNPHGLG
Trigger: ACCTAATCCGTGGGGGTTTGGGGCCTGCGCGGGGCACGCGCATGCGATGACCGTTGGATGGGTCGGCGTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR TCA 72 bp TCGGCAGCCACGTCCTTGTCCTCACCCGCAGCGCAGTaGCGCCGACCCATCCAACGGTCATCGCATGCGCGT +
Preference number: 3 (lower is better)
Translates to: SAATSLSSPAAQ*RRPIQRSSHAR
Trigger: ACGCGCATGCGATGACCGTTGGATGGGTCGGCGTCACTGCGCTGCGGGTGAGGACAAGGACGTGGCTGCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR GCA 72 bp AAATCCCGGACCCATACGTCCGGTTCCTTAAGGCCTTaGCCACACGCAGCGGCTGGCCCCGCGGTGGGAGTG +
Preference number: 3 (lower is better)
Translates to: KSRTHTSGSLRP*PHAAAGPAVGV
Trigger: CACTCCCACCGCGGGGCCAGCCGCTGCGTGTGGGCAAGGCCTTAAGGAACCGGACGTATGGGTCCGGGATTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR-3UTR CAA 90 bp TTGGCGAGTCGGCAGCCACGTCCTTGTCCTCACCCGCAGCGCAGTGACGCCGACGCCCCGGGAAGAGTCTaGGCAGGGATGAGGAAAGAA +
Preference number: 3 (lower is better)
Translates to: LASRQPRPCPHPQRSDADAPGRV*AGMRKE
Trigger: TTCTTTCCTCATCCCTGCCAAGACTCTTCCCGGGGC...GTCGGCGTCACTGCGCTGCGGGTGAGGACAAGGACGTGGCTGCCGACTCGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR TCA 72 bp TCCATGCTGCAAGCCTCATCATCCCCAAAGCCCTGCTaGGAGCTGCTTGGTCGTGTCCCTCCATCAGAGGAA +
Preference number: 3 (lower is better)
Translates to: SMLQASSSPKPC*ELLGRVPPSEE
Trigger: TTCCTCTGATGGAGGGACACGACCAAGCAGCTCTCAGCAGGGCTTTGGGGATGATGAGGCTTGCAGCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431357.1
3UTR CCA 72 bp AGCCTCATCATCCCCAAAGCCCTGCTGAGAGCTGCTTaGTCGTGTCCCTCCATCAGAGGAACCAGAACTGCT +
Preference number: 3 (lower is better)
Translates to: SLIIPKALLRAA*SCPSIRGTRTA
Trigger: AGCAGTTCTGGTTCCTCTGATGGAGGGACACGACCAAGCAGCTCTCAGCAGGGCTTTGGGGATGATGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431357.1
3UTR GCA 72 bp CAGGATCGTGGAGTCAGCATTAGTTGGTGTCCATGCTaGAAGCCTCATCATCCCCAAAGCCCTGCTGAGAGC +
Preference number: 3 (lower is better)
Translates to: QDRGVSISWCPC*KPHHPQSPAES
Trigger: GCTCTCAGCAGGGCTTTGGGGATGATGAGGCTTGCAGCATGGACACCAACTAATGCTGACTCCACGATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431357.1
3UTR CCA 72 bp GCTACAGGGTGGCAGGATCGTGGAGTCAGCATTAGTTaGTGTCCATGCTGCAAGCCTCATCATCCCCAAAGC +
Preference number: 3 (lower is better)
Translates to: ATGWQDRGVSIS*CPCCKPHHPQS
Trigger: GCTTTGGGGATGATGAGGCTTGCAGCATGGACACCAACTAATGCTGACTCCACGATCCTGCCACCCTGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431357.1
3UTR CCA 72 bp GATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTaGCAGGATCGTGGAGTCAGCATTAGTTGGTGTCCA +
Preference number: 3 (lower is better)
Translates to: DVLLGDYTGATG*QDRGVSISWCP
Trigger: TGGACACCAACTAATGCTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431357.1
3UTR CCA 72 bp GCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTaGCGCTACAGGGTGGCAGGATCGTGGAGTCAGCAT +
Preference number: 3 (lower is better)
Translates to: AECQRCSPGGLH*RYRVAGSWSQH
Trigger: ATGCTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431357.1
3UTR CCA 72 bp GCACATAGCGAGGGAAAGGGGAGTTTACTTGAGGTTTaGGTTACTGTGAGCAGACTACTTGGGGTGACTAGT +
Preference number: 3 (lower is better)
Translates to: AHSEGKGSLLEV*VTVSRLLGVTS
Trigger: ACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCAAACCTCAAGTAAACTCCCCTTTCCCTCGCTATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR TCA 72 bp TCGTGTCCCTCCATCAGAGGAACCAGAACTGCTAAGTaGAGGTGTCTTATAAAATTCATCATCTCGACGTTG +
Preference number: 3 (lower is better)
Translates to: SCPSIRGTRTAK*RCLIKFIISTL
Trigger: CAACGTCGAGATGATGAATTTTATAAGACACCTTCACTTAGCAGTTCTGGTTCCTCTGATGGAGGGACACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431357.1
3UTR GCA 72 bp TTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTaGAGAGTGTCAAAGATGTTCTCCTGGGGGATTACA +
Preference number: 3 (lower is better)
Translates to: FLVWFLDRTLAV*RVSKMFSWGIT
Trigger: TGTAATCCCCCAGGAGAACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
3UTR CCA 72 bp GCAGGGATGAGGAAAGAACCCGTTCTAGAAAGCATCTaGGTAACACCAAAATGTATTACTACCCTAAATCGC +
Preference number: 3 (lower is better)
Translates to: AGMRKEPVLESI*VTPKCITTLNR
Trigger: GCGATTTAGGGTAGTAATACATTTTGGTGTTACCCAGATGCTTTCTAGAACGGGTTCTTTCCTCATCCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
3UTR CCA 72 bp TTCCTTCTGCTCATAAAAGAAGGGTATTTCCTTGTCTaGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTG +
Preference number: 3 (lower is better)
Translates to: FLLLIKEGYFLV*FLDRTLAVCRV
Trigger: CACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATACCCTTCTTTTATGAGCAGAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp CGAGTCGGCAGCCACGTCCTTGTCCTCACCCGCAGCGCAGTGACGCCGACCCATGGGCAGCCCTGCAGGTaGGGTGGGTCTCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RVGSHVLVLTRSAVTPTHGQPCR*GGSPGC
Trigger: GCAGCCTGGAGACCCACCCCACCTGCAGGGCTGCCC...ATGGGTCGGCGTCACTGCGCTGCGGGTGAGGACAAGGACGTGGCTGCCGACTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp CGAGTCGGCAGCCACGTCCTTGTCCTCACCCGCAGCGCAGTGACGCCGACCCATGGTGGGTCTCCAGGCTaGTCCATACTCAGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: RVGSHVLVLTRSAVTPTHGGSPG*SILSAC
Trigger: ACAGGCGCTGAGTATGGAGCAGCCTGGAGACCCACC...ATGGGTCGGCGTCACTGCGCTGCGGGTGAGGACAAGGACGTGGCTGCCGACTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp AGTGACGCCGACCCATCCAACGGTCATCGCATGCGCGTGCCCCGCGCAGGCCCCGAAAGCAATAGTGGCTaGCCATATAGCGCTGATGCG +
Preference number: 4 (lower is better)
Translates to: SDADPSNGHRMRVPRAGPESNSG*PYSADA
Trigger: CGCATCAGCGCTATATGGGCAGCCACTATTGCTTTC...GGGGCCTGCGCGGGGCACGCGCATGCGATGACCGTTGGATGGGTCGGCGTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CCA 90 bp CACCCGCAGCGCAGTGACGCCGACCCATCCAACGGTCATCGCATGCGCGTGCCCGAGAAACGTTTGAGGTaGACCACCAGGATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: HPQRSDADPSNGHRMRVPEKRLR*TTRILG
Trigger: GCCCAAGATCCTGGTGGTCCACCTCAAACGTTTCTC...GGGCACGCGCATGCGATGACCGTTGGATGGGTCGGCGTCACTGCGCTGCGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR TCA 90 bp TTAAGGCCTTGCCCACACGCAGCGGCTGGCCCCGCGGTGGGAGTGGGGACGGGGTCTTTGCCTTCTTCCTaGTGCTCCATTTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LRPCPHAAAGPAVGVGTGSLPSS*CSISSS
Trigger: TGAGGAAGAAATGGAGCATCAGGAAGAAGGCAAAGA...CCCCGTCCCCACTCCCACCGCGGGGCCAGCCGCTGCGTGTGGGCAAGGCCTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp TTGGCGAGTCGGCAGCCACGTCCTTGTCCTCACCCGCAGCGCAGTGACGCCGACTTTCTGACGATGGGTTaGTGGCCTTCTACACAGCCG +
Preference number: 4 (lower is better)
Translates to: LASRQPRPCPHPQRSDADFLTMG*WPSTQP
Trigger: CGGCTGTGTAGAAGGCCAGCAACCCATCGTCAGAAA...GTCGGCGTCACTGCGCTGCGGGTGAGGACAAGGACGTGGCTGCCGACTCGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp AGTGACGCCGACCCATCCAACGGTCATCGCATGCGCGTGCCCCGCGCAGGCCCCCAGTGTTGTCTAGCTTaGTCAACTGCTCGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: SDADPSNGHRMRVPRAGPQCCLA*STARRC
Trigger: ACACCTACGAGCAGTTGAGCAAGCTAGACAACACTG...GGGGCCTGCGCGGGGCACGCGCATGCGATGACCGTTGGATGGGTCGGCGTCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp CACCCGCAGCGCAGTGACGCCGACCCATCCAACGGTCATCGCATGCGCGTGCCCGCTCCAAGGGTGAGCTaGCAAACTCATCAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: HPQRSDADPSNGHRMRVPAPRVS*QTHQVK
Trigger: CTTTACCTGATGAGTTTGGCAGCTCACCCTTGGAGC...GGGCACGCGCATGCGATGACCGTTGGATGGGTCGGCGTCACTGCGCTGCGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp CAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGGTCATCGCATGCGCGTaGCCCGCGCAGGCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: QRCSPGGLHWRYRVAGSWVIACA*PAQAPN
Trigger: GTTTGGGGCCTGCGCGGGGCACGCGCATGCGATGAC...CCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CCA 90 bp TTAAGGCCTTGCCCACACGCAGCGGCTGGCCCCGCGGTGGGAGTGGGGACGGGGGACTCAACGGAGAAATaGGCTTCAGTGGGTAACTTT +
Preference number: 4 (lower is better)
Translates to: LRPCPHAAAGPAVGVGTGDSTEK*ASVGNF
Trigger: AAAGTTACCCACTGAAGCCCATTTCTCCGTTGAGTC...CCCCGTCCCCACTCCCACCGCGGGGCCAGCCGCTGCGTGTGGGCAAGGCCTTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR TCA 90 bp AAAATCCCGGACCCATACGTCCGGTTCCTTAAGGCCTTGCCCACACGCAGCGGCCCCTGGCTCCAAGGGTaGGCTGCCAAACTCATCAGG +
Preference number: 4 (lower is better)
Translates to: KIPDPYVRFLKALPTRSGPWLQG*AAKLIR
Trigger: CCTGATGAGTTTGGCAGCTCACCCTTGGAGCCAGGG...GCCGCTGCGTGTGGGCAAGGCCTTAAGGAACCGGACGTATGGGTCCGGGATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CCA 90 bp CGAGTCGGCAGCCACGTCCTTGTCCTCACCCGCAGCGCAGTGACGCCGACCCATGGAGTCAGCATTAGTTaGTGTCCATGCTGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: RVGSHVLVLTRSAVTPTHGVSIS*CPCCKP
Trigger: AGGCTTGCAGCATGGACACCAACTAATGCTGACTCC...ATGGGTCGGCGTCACTGCGCTGCGGGTGAGGACAAGGACGTGGCTGCCGACTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR TCA 90 bp GGTGGGTCTCCAGGCTGCTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGCAGATCCACCCCTGCTaGCACCGGAACTGTGCATCC +
Preference number: 4 (lower is better)
Translates to: GGSPGCSILSACVPLHSSQIHPC*HRNCAS
Trigger: GGATGCACAGTTCCGGTGTCAGCAGGGGTGGATCTG...CGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAGCAGCCTGGAGACCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR TCA 90 bp CACCCGCAGCGCAGTGACGCCGACCCATCCAACGGTCATCGCATGCGCGTGCCCCTGGAAATTACAAGATaGCTCAACGGAGAAATGGGC +
Preference number: 4 (lower is better)
Translates to: HPQRSDADPSNGHRMRVPLEITR*LNGEMG
Trigger: GCCCATTTCTCCGTTGAGTCATCTTGTAATTTCCAG...GGGCACGCGCATGCGATGACCGTTGGATGGGTCGGCGTCACTGCGCTGCGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp CTTGTCCTCACCCGCAGCGCAGTGACGCCGACCCATCCAACGGTCATCGCATGCTCAATAAGATACCACTaGGCCCCGCGTTGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: LVLTRSAVTPTHPTVIACSIRYH*APRWSV
Trigger: CACACTCCAACGCGGGGCGCAGTGGTATCTTATTGA...GCATGCGATGACCGTTGGATGGGTCGGCGTCACTGCGCTGCGGGTGAGGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp CGAGTCGGCAGCCACGTCCTTGTCCTCACCCGCAGCGCAGTGACGCCGACCCATGGTTGCAATGGTGTCTaGCTTGCTGAAATGGCAACT +
Preference number: 4 (lower is better)
Translates to: RVGSHVLVLTRSAVTPTHGCNGV*LAEMAT
Trigger: AGTTGCCATTTCAGCAAGGCAGACACCATTGCAACC...ATGGGTCGGCGTCACTGCGCTGCGGGTGAGGACAAGGACGTGGCTGCCGACTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp GTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTCAGCAGCCCTGCTGAGAGCTaGTTGGTCGTGTCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: VLLGDYTGATGWQDRGVSSPAES*LVVSLH
Trigger: ATGGAGGGACACGACCAAGCAGCTCTCAGCAGGGCT...GCTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp CTGCAGGTGGGGTGGGTCTCCAGGCTGCTCCATACTCAGCGCCTGTGTTCCTCTCTGACGATGGGTTGCTaGCCTTCTACACAGCCGTAC +
Preference number: 4 (lower is better)
Translates to: LQVGWVSRLLHTQRLCSSLTMGC*PSTQPY
Trigger: GTACGGCTGTGTAGAAGGCCAGCAACCCATCGTCAG...AGAGGAACACAGGCGCTGAGTATGGAGCAGCCTGGAGACCCACCCCACCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp GCCCTGCTGAGAGCTGCTTGGTCGTGTCCCTCCATCAGAGGAACCAGAACTGCTCCTGGGGGATTACACTaGCGCTACAGGGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ALLRAAWSCPSIRGTRTAPGGLH*RYRVAG
Trigger: TCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGG...AGCAGTTCTGGTTCCTCTGATGGAGGGACACGACCAAGCAGCTCTCAGCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR TCA 90 bp AAGCCTCATCATCCCCAAAGCCCTGCTGAGAGCTGCTTGGTCGTGTCCCTCCATCAGATCCACCCCTGCTaGCACCGGAACTGTGCATCC +
Preference number: 4 (lower is better)
Translates to: KPHHPQSPAESCLVVSLHQIHPC*HRNCAS
Trigger: GGATGCACAGTTCCGGTGTCAGCAGGGGTGGATCTG...ATGGAGGGACACGACCAAGCAGCTCTCAGCAGGGCTTTGGGGATGATGAGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR GCA 90 bp AAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGACTCCCAGGCTTCCTTTaGCACCACCGCATCTGGCCG +
Preference number: 4 (lower is better)
Translates to: KDVLLGDYTGATGWQDRGLPGFL*HHRIWP
Trigger: CGGCCAGATGCGGTGGTGGCAAAGGAAGCCTGGGAG...TCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp GGCGCTACAGGGTGGCAGGATCGTGGAGTCAGCATTAGTTGGTGTCCATGCTGCCTCCCAGGCTTCCTTTaGCACCACCCGGTTCAGATC +
Preference number: 4 (lower is better)
Translates to: GATGWQDRGVSISWCPCCLPGFL*HHPVQI
Trigger: GATCTGAACCGGGTGGTGGCAAAGGAAGCCTGGGAG...GCAGCATGGACACCAACTAATGCTGACTCCACGATCCTGCCACCCTGTAGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR CCA 90 bp AGTGACGCCGACCCATCCAACGGTCATCGCATGCGCGTGCCCCGCGCAGGCCCCTATATGAGAGGATGGTaGCTCCTGACAATTATACGA +
Preference number: 4 (lower is better)
Translates to: SDADPSNGHRMRVPRAGPYMRGW*LLTIIR
Trigger: TCGTATAATTGTCAGGAGCCACCATCCTCTCATATA...GGGGCCTGCGCGGGGCACGCGCATGCGATGACCGTTGGATGGGTCGGCGTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CCA 90 bp CATGCTGCAAGCCTCATCATCCCCAAAGCCCTGCTGAGAGCTGCTTGGTCGTGTATGCGAGGTGCCACATaGGCGTCCCTTCCAGACCAC +
Preference number: 4 (lower is better)
Translates to: HAASLIIPKALLRAAWSCMRGAT*ASLPDH
Trigger: GTGGTCTGGAAGGGACGCCCATGTGGCACCTCGCAT...ACACGACCAAGCAGCTCTCAGCAGGGCTTTGGGGATGATGAGGCTTGCAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR CCA 90 bp CTTGTCCTCACCCGCAGCGCAGTGACGCCGACCCATCCAACGGTCATCGCATGCAGTGGCCAACCCCCATaGCTCCATAATGATTGGACA +
Preference number: 4 (lower is better)
Translates to: LVLTRSAVTPTHPTVIACSGQPP*LHNDWT
Trigger: TGTCCAATCATTATGGAGCCATGGGGGTTGGCCACT...GCATGCGATGACCGTTGGATGGGTCGGCGTCACTGCGCTGCGGGTGAGGACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CCA 90 bp GTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTCAGCCTGCTGAGAGCTGCTTaGTCGTGTCCCTCCATCAGA +
Preference number: 4 (lower is better)
Translates to: VLLGDYTGATGWQDRGVSLLRAA*SCPSIR
Trigger: TCTGATGGAGGGACACGACCAAGCAGCTCTCAGCAG...GCTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp GTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGCCAAGCTCGGACTTCTaGGTCTCCGCATCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: VHTTTYPFSVKNHKADQAPSSDF*VSASGR
Trigger: GCGACCGGATGCGGAGACTCAGAAGTCCGAGCTTGG...CGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR TCA 90 bp GAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGACCCTGGCTCCAAGGGTaGGCTGCCAAACTCATCAGG +
Preference number: 4 (lower is better)
Translates to: ECQRCSPGGLHWRYRVAGPWLQG*AAKLIR
Trigger: CCTGATGAGTTTGGCAGCTCACCCTTGGAGCCAGGG...TCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp AAAGCCCTGCTGAGAGCTGCTTGGTCGTGTCCCTCCATCAGAGGAACCAGAACTCCCTGGCTCCAAGGGTaGGCTGCCAAACTCATCAGG +
Preference number: 4 (lower is better)
Translates to: KALLRAAWSCPSIRGTRTPWLQG*AAKLIR
Trigger: CCTGATGAGTTTGGCAGCTCACCCTTGGAGCCAGGG...AGTTCTGGTTCCTCTGATGGAGGGACACGACCAAGCAGCTCTCAGCAGGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR TCA 90 bp CCACGTCCTTGTCCTCACCCGCAGCGCAGTGACGCCGACCCATCCAACGGTCATCACATAAGGCCTTGCTaGCAGGTTACAGACAAACTC +
Preference number: 4 (lower is better)
Translates to: PRPCPHPQRSDADPSNGHHIRPC*QVTDKL
Trigger: GAGTTTGTCTGTAACCTGTCAGCAAGGCCTTATGTG...ATGACCGTTGGATGGGTCGGCGTCACTGCGCTGCGGGTGAGGACAAGGACGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR TCA 90 bp TGCTGGGTTCCACAGGAGGTTGAGGGGCCAGGATCCCCAACACTAGATATCTTCTCCCCAAAGCCCTGCTaGGAGCTGCTTGGTCGTGTC +
Preference number: 4 (lower is better)
Translates to: CWVPQEVEGPGSPTLDIFSPKPC*ELLGRV
Trigger: GACACGACCAAGCAGCTCTCAGCAGGGCTTTGGGGA...GAAGATATCTAGTGTTGGGGATCCTGGCCCCTCAACCTCCTGTGGAACCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp GTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTCAGCTTTCTGACGATGGGTTaGTGGCCTTCTACACAGCCG +
Preference number: 4 (lower is better)
Translates to: VLLGDYTGATGWQDRGVSFLTMG*WPSTQP
Trigger: CGGCTGTGTAGAAGGCCAGCAACCCATCGTCAGAAA...GCTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp AAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGATGTTCCTGGAGCCATTaGAGGCCCCTGGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: KDVLLGDYTGATGWQDRGCSWSH*RPLAPR
Trigger: CCTTGGAGCCAGGGGCCTGCAATGGCTCCAGGAACA...TCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp GCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAATGCGAGGTGCCACATaGGCGTCCCTTCCAGACCAC +
Preference number: 4 (lower is better)
Translates to: AECQRCSPGGLHWRYRVAMRGAT*ASLPDH
Trigger: GTGGTCTGGAAGGGACGCCCATGTGGCACCTCGCAT...TGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp CATGCTGCAAGCCTCATCATCCCCAAAGCCCTGCTGAGAGCTGCTTGGTCGTGTCAATGCCAGACAGCCTaGAGAGAGCCTCGCACAGGT +
Preference number: 4 (lower is better)
Translates to: HAASLIIPKALLRAAWSCQCQTA*REPRTG
Trigger: ACCTGTGCGAGGCTCTCTCCAGGCTGTCTGGCATTG...ACACGACCAAGCAGCTCTCAGCAGGGCTTTGGGGATGATGAGGCTTGCAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR CCA 90 bp CATGCTGCAAGCCTCATCATCCCCAAAGCCCTGCTGAGAGCTGCTTGGTCGTGTCTTCACAGCTGTTCCTaGAGCCATTGCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: HAASLIIPKALLRAAWSCLHSCS*SHCRPL
Trigger: CAGGGGCCTGCAATGGCTCCAGGAACAGCTGTGAAG...ACACGACCAAGCAGCTCTCAGCAGGGCTTTGGGGATGATGAGGCTTGCAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR CCA 90 bp GCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAACTGGCGCTACAGGGTaGCAGGATCGTGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: AECQRCSPGGLHWRYRVATGATG*QDRGVS
Trigger: GCTGACTCCACGATCCTGCCACCCTGTAGCGCCAGT...TGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp TGGGTTACTGTGAGCAGACTACTTGGGGTGACTAGTATTGGCATCAGAACCAGAGGGCAGCCCTGCAGGTaGGGTGGGTCTCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: WVTVSRLLGVTSIGIRTRGQPCR*GGSPGC
Trigger: GCAGCCTGGAGACCCACCCCACCTGCAGGGCTGCCC...TCTGGTTCTGATGCCAATACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp CTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACCCAAGCTCGGACTTCTaGGTCTCCGCATCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: LHTQRLCSSPFFGIHQTYPSSDF*VSASGR
Trigger: GCGACCGGATGCGGAGACTCAGAAGTCCGAGCTTGG...GTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp TGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTCAGAGTAGACTGGAAGCGTaGCACATTCCGAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: CSPGGLHWRYRVAGSWSQSRLEA*HIPSHP
Trigger: TGGATGGCTCGGAATGTGTCACGCTTCCAGTCTACT...CTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp CTACAGGGTGGCAGGATCGTGGAGTCAGCATTAGTTGGTGTCCATGCTGCAAGCTGCGGAGGAAGTGCTTaGTGGCCTGGACTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LQGGRIVESALVGVHAASCGGSA*WPGLPL
Trigger: GAGAGGAAGTCCAGGCCATCAAGCACTTCCTCCGCA...GCTTGCAGCATGGACACCAACTAATGCTGACTCCACGATCCTGCCACCCTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR TCA 90 bp CAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGGGCAGGGCTGGCCTTTaGTCTTCTTTTGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: QRCSPGGLHWRYRVAGSWGRAGL*SSFGWS
Trigger: AGACCACCCAAAAGAAGATCAAAGGCCAGCCCTGCC...CCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp AAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGGGTCTCCATGGTGGTaGAGAGCTCGATGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: KDVLLGDYTGATGWQDRGGSPWW*RARCSL
Trigger: GAGACTGCATCGAGCTCTTCACCACCATGGAGACCC...TCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp TCTGCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGTCCCCAAAGCCCTGCTaGGAGCTGCTTGGTCGTGTC +
Preference number: 4 (lower is better)
Translates to: SAECQRCSPGGLHWRYRVSPKPC*ELLGRV
Trigger: GACACGACCAAGCAGCTCTCAGCAGGGCTTTGGGGA...CACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp CTGCAGGTGGGGTGGGTCTCCAGGCTGCTCCATACTCAGCGCCTGTGTTCCTCTGCAGACTACTTGGGGTaGCTAGTATTGGCATCAGAA +
Preference number: 4 (lower is better)
Translates to: LQVGWVSRLLHTQRLCSSADYLG*LVLASE
Trigger: TTCTGATGCCAATACTAGTCACCCCAAGTAGTCTGC...AGAGGAACACAGGCGCTGAGTATGGAGCAGCCTGGAGACCCACCCCACCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp AAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTTTGAACATGCGAGGTaGCACATGGGCGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: KMFSWGITLALQGGRIVEFEHAR*HMGVPS
Trigger: GGAAGGGACGCCCATGTGGCACCTCGCATGTTCAAA...CTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR GCA 90 bp GTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTCAGCCATCCACGGAAGTGCTaGAGACCTCGTACACGAAAA +
Preference number: 4 (lower is better)
Translates to: VLLGDYTGATGWQDRGVSHPRKC*RPRTRK
Trigger: TTTTCGTGTACGAGGTCTGCAGCACTTCCGTGGATG...GCTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR GCA 90 bp CAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGCCATCCACGGAAGTaGTGCAGACCTCGTACACGA +
Preference number: 4 (lower is better)
Translates to: QRCSPGGLHWRYRVAGSWSHPRK*CRPRTR
Trigger: TCGTGTACGAGGTCTGCAGCACTTCCGTGGATGGCT...CCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR GCA 90 bp AAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAAGCCCTGCTGAGAGCTaGTTGGTCGTGTCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: KDVLLGDYTGATGWQDRGSPAES*LVVSLH
Trigger: ATGGAGGGACACGACCAAGCAGCTCTCAGCAGGGCT...TCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR GCA 90 bp CTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACGGTTCCTTAAGGCCTTaGCCACACGCAGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LHTQRLCSSPFFGIHQTYGSLRP*PHAAAG
Trigger: GCCAGCCGCTGCGTGTGGGCAAGGCCTTAAGGAACC...GTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CCA 90 bp GCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCACAATGCCAGACAGCCTaGAGAGAGCCTCGCACAGGT +
Preference number: 4 (lower is better)
Translates to: AECQRCSPGGLHWRYRVAQCQTA*REPRTG
Trigger: ACCTGTGCGAGGCTCTCTCCAGGCTGTCTGGCATTG...TGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp AGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGCTTCACAGCTGTTCCTaGAGCCATTGCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RVSKMFSWGITLALQGGRLHSCS*SHCRPL
Trigger: CAGGGGCCTGCAATGGCTCCAGGAACAGCTGTGAAG...CCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp CAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTAGACTGGAAGCGTaGCACATTCCGAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: QRCSPGGLHWRYRVAGSWSRLEA*HIPSHP
Trigger: TGGATGGCTCGGAATGTGTCACGCTTCCAGTCTACT...CCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp AAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGGATTGGACACGGCAATaGGGTCGTACACATAAGGCC +
Preference number: 4 (lower is better)
Translates to: KMFSWGITLALQGGRIVEDWTRQ*GRTHKA
Trigger: GGCCTTATGTGTACGACCTCATTGCCGTGTCCAATC...CTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp TCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTCAGCATTAGATTGGACACGGCAATaGGGTCGTACACATAAGGCC +
Preference number: 4 (lower is better)
Translates to: SWGITLALQGGRIVESALDWTRQ*GRTHKA
Trigger: GGCCTTATGTGTACGACCTCATTGCCGTGTCCAATC...TAATGCTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR TCA 90 bp CTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCCCAAAGCCCTGCTaGGAGCTGCTTGGTCGTGTC +
Preference number: 4 (lower is better)
Translates to: LHTQRLCSSPFFGIHQTYSPKPC*ELLGRV
Trigger: GACACGACCAAGCAGCTCTCAGCAGGGCTTTGGGGA...GTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp CTGCAGGTGGGGTGGGTCTCCAGGCTGCTCCATACTCAGCGCCTGTGTTCCTCTAAAGGGGAGTTTACTTaGGGTTTGGGTTACTGTGAG +
Preference number: 4 (lower is better)
Translates to: LQVGWVSRLLHTQRLCSSKGEFT*GLGYCE
Trigger: CTCACAGTAACCCAAACCTCAAGTAAACTCCCCTTT...AGAGGAACACAGGCGCTGAGTATGGAGCAGCCTGGAGACCCACCCCACCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp TGTTCTCAAGCCAACATGGAAACAACTAGACGGGACACAGCACCGGGCAGTTTTGGTTCCACAGGAGGTTaGGGGGCCAGGATCCCCAAC +
Preference number: 4 (lower is better)
Translates to: CSQANMETTRRDTAPGSFGSTGG*GARIPN
Trigger: GTTGGGGATCCTGGCCCCTCAACCTCCTGTGGAACC...AAAACTGCCCGGTGCTGTGTCCCGTCTAGTTGTTTCCATGTTGGCTTGAGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR TCA 90 bp AAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGATACCCTAAATCGCCATaGACTGGAGCCCTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: KDVLLGDYTGATGWQDRGYPKSP*TGALSR
Trigger: CCGGGAAAGGGCTCCAGTTCATGGCGATTTAGGGTA...TCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp CTTGTCCTCACCCGCAGCGCAGTGACGCCGACCCATCCAACGGTCATCGCATGCACTGCTCGTAGGTGTTaGTCATGTATTTGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LVLTRSAVTPTHPTVIACTARRC*SCICSR
Trigger: TCTGGAACAAATACATGAGCAACACCTACGAGCAGT...GCATGCGATGACCGTTGGATGGGTCGGCGTCACTGCGCTGCGGGTGAGGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp TGCTGGGTTCCACAGGAGGTTGAGGGGCCAGGATCCCCAACACTAGATATCTTCTTTGAACATGCGAGGTaGCACATGGGCGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: CWVPQEVEGPGSPTLDIFFEHAR*HMGVPS
Trigger: GGAAGGGACGCCCATGTGGCACCTCGCATGTTCAAA...GAAGATATCTAGTGTTGGGGATCCTGGCCCCTCAACCTCCTGTGGAACCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp GGGGTGGGTCTCCAGGCTGCTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTGAAAGCAATAGTGGCTaGCCATATAGCGCTGATGCG +
Preference number: 4 (lower is better)
Translates to: GVGLQAAPYSAPVFLSILESNSG*PYSADA
Trigger: CGCATCAGCGCTATATGGGCAGCCACTATTGCTTTC...AAGAATGGAGAGGAACACAGGCGCTGAGTATGGAGCAGCCTGGAGACCCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp GTCTGCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTCAGTACCAGGGGTCATaGTCCCCAAGGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: VCRVSKMFSWGITLALQGQYQGS*SPRVSM
Trigger: CATGGAGACCCTTGGGGAGCATGACCCCTGGTACTG...ACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGCAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp AAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGGGCAACTCAGCACATTaGTGGGGTCACTGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: KMFSWGITLALQGGRIVEGNSAH*WGHCSH
Trigger: GTGAGAACAGTGACCCCACCAATGTGCTGAGTTGCC...CTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp GGGCTTTCGAATGGGGGCCCCGGGAAGAGTCTTGGCAGGGATGAGGAAAGAACCGCATCTCTTTCTCGATaGTTGCAATGGTGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GLSNGGPGKSLGRDEERTASLSR*LQWCLP
Trigger: AGGCAGACACCATTGCAACCATCGAGAAAGAGATGC...GGTTCTTTCCTCATCCCTGCCAAGACTCTTCCCGGGGCCCCCATTCGAAAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CCA 90 bp AAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGACTGCAAGGTCTGCCTaGGCCATGTGCCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: KMFSWGITLALQGGRIVETARSA*AMCHLH
Trigger: ATGAAGATGGCACATGGCCCAGGCAGACCTTGCAGT...CTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp AGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGCATCTGGCCGCCCATTaGCATCCTTCAGCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: RVSKMFSWGITLALQGGRHLAAH*HPSAPS
Trigger: ACTTGGAGCTGAAGGATGCCAATGGGCGGCCAGATG...CCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp CATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCTGCCACCACCGCATCTaGCCGCCCATTGGCATCCTT +
Preference number: 4 (lower is better)
Translates to: HTQRLCSSPFFGIHQTYSCHHRI*PPIGIL
Trigger: AAGGATGCCAATGGGCGGCCAGATGCGGTGGTGGCA...GGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp CCCGGGAAGAGTCTTGGCAGGGATGAGGAAAGAACCCGTTCTAGAAAGCATCTGCAATGCCAGACAGCCTaGAGAGAGCCTCGCACAGGT +
Preference number: 4 (lower is better)
Translates to: PGKSLGRDEERTRSRKHLQCQTA*REPRTG
Trigger: ACCTGTGCGAGGCTCTCTCCAGGCTGTCTGGCATTG...CAGATGCTTTCTAGAACGGGTTCTTTCCTCATCCCTGCCAAGACTCTTCCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CCA 90 bp AGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCTTCACAGCTGTTCCTaGAGCCATTGCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SVKDVLLGDYTGATGWQDLHSCS*SHCRPL
Trigger: CAGGGGCCTGCAATGGCTCCAGGAACAGCTGTGAAG...ATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp TGCTGGGTTCCACAGGAGGTTGAGGGGCCAGGATCCCCAACACTAGATATCTTCACTGGGGTCATTTCCTaGCTCATCTTCCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: CWVPQEVEGPGSPTLDIFTGVIS*LIFPTA
Trigger: GGCAGTGGGGAAGATGAGCCAGGAAATGACCCCAGT...GAAGATATCTAGTGTTGGGGATCCTGGCCCCTCAACCTCCTGTGGAACCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CCA 90 bp GTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTCAGCGGTAAAAAGCCTTTTTaGGCAGGGCTGGCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: VLLGDYTGATGWQDRGVSGKKPF*AGLAFD
Trigger: ATCAAAGGCCAGCCCTGCCCAAAAAGGCTTTTTACC...GCTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp GAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGACTGCTGAGAGCTGCTTaGTCGTGTCCCTCCATCAGA +
Preference number: 4 (lower is better)
Translates to: ECQRCSPGGLHWRYRVAGLLRAA*SCPSIR
Trigger: TCTGATGGAGGGACACGACCAAGCAGCTCTCAGCAG...TCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp ACAGGGTGGCAGGATCGTGGAGTCAGCATTAGTTGGTGTCCATGCTGCAAGCCTCTGCTGAGAGCTGCTTaGTCGTGTCCCTCCATCAGA +
Preference number: 4 (lower is better)
Translates to: TGWQDRGVSISWCPCCKPLLRAA*SCPSIR
Trigger: TCTGATGGAGGGACACGACCAAGCAGCTCTCAGCAG...AGGCTTGCAGCATGGACACCAACTAATGCTGACTCCACGATCCTGCCACCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR CCA 90 bp CATCCCCAAAGCCCTGCTGAGAGCTGCTTGGTCGTGTCCCTCCATCAGAGGAACGGAGTCAGCATTAGTTaGTGTCCATGCTGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: HPQSPAESCLVVSLHQRNGVSIS*CPCCKP
Trigger: AGGCTTGCAGCATGGACACCAACTAATGCTGACTCC...GTTCCTCTGATGGAGGGACACGACCAAGCAGCTCTCAGCAGGGCTTTGGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR CCA 90 bp CTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACCCTGGGGGATTACACTaGCGCTACAGGGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LHTQRLCSSPFFGIHQTYPGGLH*RYRVAG
Trigger: TCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGG...GTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp GCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGCTCCGCAGGGATGTTaGATAGCTTCCGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: AECQRCSPGGLHWRYRVAAPQGC*IASASL
Trigger: AAGAGATGCGGAAGCTATTCAACATCCCTGCGGAGC...TGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp TGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTCAGGAGGATGGTGGCTCCTaGCAATTATACGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CSPGGLHWRYRVAGSWSQEDGGS*QLYEAE
Trigger: TTCTGCTTCGTATAATTGTCAGGAGCCACCATCCTC...CTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp GTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTCAGCTCTTTGCCTTCTTCCTaGTGCTCCATTTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: VLLGDYTGATGWQDRGVSSLPSS*CSISSS
Trigger: TGAGGAAGAAATGGAGCATCAGGAAGAAGGCAAAGA...GCTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp TCTGCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGGCAGGGCTGGCCTTTaGTCTTCTTTTGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SAECQRCSPGGLHWRYRVGRAGL*SSFGWS
Trigger: AGACCACCCAAAAGAAGATCAAAGGCCAGCCCTGCC...CACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp GTCTGCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGGCTGGCCTTTaGTCTTCTTTTGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: VCRVSKMFSWGITLALQGGRAGL*SSFGWS
Trigger: AGACCACCCAAAAGAAGATCAAAGGCCAGCCCTGCC...ACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGCAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp TCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCCCCATCCCACCGGGTCTCCATGGTGGTaGAGAGCTCGATGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: SPFFGIHQTYSIEYPHPTGSPWW*RARCSL
Trigger: GAGACTGCATCGAGCTCTTCACCACCATGGAGACCC...GGTGGGATGGGGGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp GTCTCCAGGCTGCTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCTGTAGGAGAAACGTTTaGGGTGGACCACCAGGATCT +
Preference number: 4 (lower is better)
Translates to: VSRLLHTQRLCSSPFFGICRRNV*GGPPGS
Trigger: AGATCCTGGTGGTCCACCTCAAACGTTTCTCCTACA...GATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAGCAGCCTGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp GAGGTTTGGGTTACTGTGAGCAGACTACTTGGGGTGACTAGTATTGGCATCAGACTCCCAGGCTTCCTTTaGCACCACCGCATCTGGCCG +
Preference number: 4 (lower is better)
Translates to: EVWVTVSRLLGVTSIGIRLPGFL*HHRIWP
Trigger: CGGCCAGATGCGGTGGTGGCAAAGGAAGCCTGGGAG...TCTGATGCCAATACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCAAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp CGAATGGGGGCCCCGGGAAGAGTCTTGGCAGGGATGAGGAAAGAACCCGTTCTAGACCACCATATTTTCTaGAGCAATGCCAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: RMGAPGRVLAGMRKEPVLDHHIF*SNARQP
Trigger: AGGCTGTCTGGCATTGCTGCAGAAAATATGGTGGTC...TAGAACGGGTTCTTTCCTCATCCCTGCCAAGACTCTTCCCGGGGCCCCCATTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp CTTGTCCTCACCCGCAGCGCAGTGACGCCGACCCATCCAACGGTCATCGCATGCGTGATTATACACATCTaGGACCACCATATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LVLTRSAVTPTHPTVIACVIIHI*DHHIFC
Trigger: GCAGAAAATATGGTGGTCGCAGATGTGTATAATCAC...GCATGCGATGACCGTTGGATGGGTCGGCGTCACTGCGCTGCGGGTGAGGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp CATGCTGCAAGCCTCATCATCCCCAAAGCCCTGCTGAGAGCTGCTTGGTCGTGTGAAAGCAATAGTGGCTaGCCATATAGCGCTGATGCG +
Preference number: 4 (lower is better)
Translates to: HAASLIIPKALLRAAWSCESNSG*PYSADA
Trigger: CGCATCAGCGCTATATGGGCAGCCACTATTGCTTTC...ACACGACCAAGCAGCTCTCAGCAGGGCTTTGGGGATGATGAGGCTTGCAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR GCA 90 bp CAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGGCTCCAAGGGTGAGCTaGCAAACTCATCAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: QRCSPGGLHWRYRVAGSWAPRVS*QTHQVK
Trigger: CTTTACCTGATGAGTTTGGCAGCTCACCCTTGGAGC...CCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR GCA 90 bp TCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCCCCATCCCACCCAGTACCAGGGGTCATaGTCCCCAAGGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: SPFFGIHQTYSIEYPHPTQYQGS*SPRVSM
Trigger: CATGGAGACCCTTGGGGAGCATGACCCCTGGTACTG...GGTGGGATGGGGGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp GCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCGGTGGGTCTCCAGGCTaGTCCATACTCAGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: ACVPLHSSGSIRHTPLSTGGSPG*SILSAC
Trigger: ACAGGCGCTGAGTATGGAGCAGCCTGGAGACCCACC...GGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp CACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGCAGCCCCGCGTTGGAGTGTaGTCCTCATTAAGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: HTTTYPFSVKNHKADQAQPRVGV*SSLRVQ
Trigger: TTGGACCCTTAATGAGGACCACACTCCAACGCGGGG...CTGCGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CCA 90 bp TCTGCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGCTGACGATGGGTTGCTaGCCTTCTACACAGCCGTAC +
Preference number: 4 (lower is better)
Translates to: SAECQRCSPGGLHWRYRVLTMGC*PSTQPY
Trigger: GTACGGCTGTGTAGAAGGCCAGCAACCCATCGTCAG...CACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp CACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGCAGCTGACGATGGGTTGCTaGCCTTCTACACAGCCGTAC +
Preference number: 4 (lower is better)
Translates to: HTTTYPFSVKNHKADQAQLTMGC*PSTQPY
Trigger: GTACGGCTGTGTAGAAGGCCAGCAACCCATCGTCAG...CTGCGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CCA 90 bp GCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCTGCCACCACCGCATCTaGCCGCCCATTGGCATCCTT +
Preference number: 4 (lower is better)
Translates to: ACVPLHSSGSIRHTPLSTCHHRI*PPIGIL
Trigger: AAGGATGCCAATGGGCGGCCAGATGCGGTGGTGGCA...GGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp GTCTCCAGGCTGCTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCTCCCTGAAGTAGACTaGAAGCGTGACACATTCCGA +
Preference number: 4 (lower is better)
Translates to: VSRLLHTQRLCSSPFFGILPEVD*KRDTFR
Trigger: TCGGAATGTGTCACGCTTCCAGTCTACTTCAGGGAG...GATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAGCAGCCTGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp AAAATCCCGGACCCATACGTCCGGTTCCTTAAGGCCTTGCCCACACGCAGCGGCGGGTTAACTTGTGCTTaGGGACAGAAAGCAATAGTG +
Preference number: 4 (lower is better)
Translates to: KIPDPYVRFLKALPTRSGGLTCA*GQKAIV
Trigger: CACTATTGCTTTCTGTCCCCAAGCACAAGTTAACCC...GCCGCTGCGTGTGGGCAAGGCCTTAAGGAACCGGACGTATGGGTCCGGGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CCA 90 bp GGGGTGGGTCTCCAGGCTGCTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTGGTAAAAAGCCTTTTTaGGCAGGGCTGGCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: GVGLQAAPYSAPVFLSILGKKPF*AGLAFD
Trigger: ATCAAAGGCCAGCCCTGCCCAAAAAGGCTTTTTACC...AAGAATGGAGAGGAACACAGGCGCTGAGTATGGAGCAGCCTGGAGACCCACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp GTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGGACCACCAGGATCTTaGGCAAGGACCATAGGTCAA +
Preference number: 4 (lower is better)
Translates to: VSKMFSWGITLALQGGRIGPPGS*ARTIGQ
Trigger: TTGACCTATGGTCCTTGCCCAAGATCCTGGTGGTCC...GATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp AAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGAGAAACGTTTGAGGTaGACCACCAGGATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: KDVLLGDYTGATGWQDRGEKRLR*TTRILG
Trigger: GCCCAAGATCCTGGTGGTCCACCTCAAACGTTTCTC...TCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp AAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGAGTGGCCAACCCCCATaGCTCCATAATGATTGGACA +
Preference number: 4 (lower is better)
Translates to: KMFSWGITLALQGGRIVESGQPP*LHNDWT
Trigger: TGTCCAATCATTATGGAGCCATGGGGGTTGGCCACT...CTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp CGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACACTGGCGCTACAGGGTaGCAGGATCGTGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: RLCSSPFFGIHQTYSIEYTGATG*QDRGVS
Trigger: GCTGACTCCACGATCCTGCCACCCTGTAGCGCCAGT...GTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp AGTGCACATAGCGAGGGAAAGGGGAGTTTACTTGAGGTTTGGGTTACTGTGAGCCCTGGGGGATTACACTaGCGCTACAGGGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SAHSEGKGSLLEVWVTVSPGGLH*RYRVAG
Trigger: TCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGG...GCTCACAGTAACCCAAACCTCAAGTAAACTCCCCTTTCCCTCGCTATGTGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CCA 90 bp GGGTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAGCCCCGCGGTGGGAGTaGGGACGGGGCTTTCGAATG +
Preference number: 4 (lower is better)
Translates to: GYFLVWFLDRTLAVCRVSAPRWE*GRGFRM
Trigger: CATTCGAAAGCCCCGTCCCCACTCCCACCGCGGGGC...TGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR TCA 90 bp GTCTGCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGCTCCACAACTTTTCTaGCGATGGGTTGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: VCRVSKMFSWGITLALQGAPQLF*RWVAGL
Trigger: AAGGCCAGCAACCCATCGTCAGAAAAGTTGTGGAGC...ACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp GTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGGCTCCACAACTTTTCTaGCGATGGGTTGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: VHTTTYPFSVKNHKADQAAPQLF*RWVAGL
Trigger: AAGGCCAGCAACCCATCGTCAGAAAAGTTGTGGAGC...CGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR TCA 90 bp AAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGATGGTGTCTGCCTTGCTaGAATGGCAACTCAGCACAT +
Preference number: 4 (lower is better)
Translates to: KDVLLGDYTGATGWQDRGWCLPC*NGNSAH
Trigger: ATGTGCTGAGTTGCCATTTCAGCAAGGCAGACACCA...TCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp CACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGCAGGCTCCGCAGGGATGTTaGATAGCTTCCGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: HTTTYPFSVKNHKADQAQAPQGC*IASASL
Trigger: AAGAGATGCGGAAGCTATTCAACATCCCTGCGGAGC...CTGCGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR TCA 90 bp GTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCCCCATCTGCGGAGGAAGTGCTTaGTGGCCTGGACTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VPLHSSGSIRHTPLSTPICGGSA*WPGLPL
Trigger: GAGAGGAAGTCCAGGCCATCAAGCACTTCCTCCGCA...GATGGGGGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp GAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATGTAGGAGAAACGTTTaGGGTGGACCACCAGGATCT +
Preference number: 4 (lower is better)
Translates to: ECQRCSPGGLHWRYRVAGCRRNV*GGPPGS
Trigger: AGATCCTGGTGGTCCACCTCAAACGTTTCTCCTACA...TCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp CTGCTGAGAGCTGCTTGGTCGTGTCCCTCCATCAGAGGAACCAGAACTGCTAAGTGTAGGAGAAACGTTTaGGGTGGACCACCAGGATCT +
Preference number: 4 (lower is better)
Translates to: LLRAAWSCPSIRGTRTAKCRRNV*GGPPGS
Trigger: AGATCCTGGTGGTCCACCTCAAACGTTTCTCCTACA...CTTAGCAGTTCTGGTTCCTCTGATGGAGGGACACGACCAAGCAGCTCTCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR TCA 90 bp AAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGCACATAAGGCCTTGCTaGCAGGTTACAGACAAACTC +
Preference number: 4 (lower is better)
Translates to: KMFSWGITLALQGGRIVEHIRPC*QVTDKL
Trigger: GAGTTTGTCTGTAACCTGTCAGCAAGGCCTTATGTG...CTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp GTCTGCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGCTTTAGTCACTATCTaGTCCTCAGAGGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: VCRVSKMFSWGITLALQGALVTI*SSEARD
Trigger: GTCCCTGGCCTCTGAGGATCAGATAGTGACTAAAGC...ACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp CTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCAGACATACTCCATTaGGTACCCCCATCCCACCCC +
Preference number: 4 (lower is better)
Translates to: LHTQRLCSSPFFGIHQTYSDILH*VPPSHP
Trigger: GGGGTGGGATGGGGGTACTCAATGGAGTATGTCTGA...GTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp GGGGTGGGTCTCCAGGCTGCTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTTTGACAAACAGGCCATaGTCCACAACTTTTCTGACG +
Preference number: 4 (lower is better)
Translates to: GVGLQAAPYSAPVFLSILLTNRP*STTFLT
Trigger: CGTCAGAAAAGTTGTGGAGCATGGCCTGTTTGTCAA...AAGAATGGAGAGGAACACAGGCGCTGAGTATGGAGCAGCCTGGAGACCCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp CTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACCTGACACCGGAACTGTaGATCCCACAGGTGCTAGTG +
Preference number: 4 (lower is better)
Translates to: LHTQRLCSSPFFGIHQTYLTPEL*IPQVLV
Trigger: CACTAGCACCTGTGGGATGCACAGTTCCGGTGTCAG...GTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp AGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGTCAGTGGTGCAGTGTTaGTCAAACACTGCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: RVSKMFSWGITLALQGGRSVVQC*SNTAKR
Trigger: CCGCTTTGCAGTGTTTGAGCAACACTGCACCACTGA...CCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR GCA 90 bp GGTGGGTCTCCAGGCTGCTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGTTCAGCATAGGCTTCTaGAATTTCCCCTTTCATCCC +
Preference number: 4 (lower is better)
Translates to: GGSPGCSILSACVPLHSSFSIGF*NFPFHP
Trigger: GGGATGAAAGGGGAAATTGCAGAAGCCTATGCTGAA...CGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAGCAGCCTGGAGACCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp AAGCCTCATCATCCCCAAAGCCCTGCTGAGAGCTGCTTGGTCGTGTCCCTCCATGACCACCATATTTTCTaGAGCAATGCCAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: KPHHPQSPAESCLVVSLHDHHIF*SNARQP
Trigger: AGGCTGTCTGGCATTGCTGCAGAAAATATGGTGGTC...ATGGAGGGACACGACCAAGCAGCTCTCAGCAGGGCTTTGGGGATGATGAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR GCA 90 bp AAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGACATCCACGGAAGTGCTaGAGACCTCGTACACGAAAA +
Preference number: 4 (lower is better)
Translates to: KDVLLGDYTGATGWQDRGHPRKC*RPRTRK
Trigger: TTTTCGTGTACGAGGTCTGCAGCACTTCCGTGGATG...TCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR GCA 90 bp GAGGTTTGGGTTACTGTGAGCAGACTACTTGGGGTGACTAGTATTGGCATCAGATGTTCCTGGAGCCATTaGAGGCCCCTGGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: EVWVTVSRLLGVTSIGIRCSWSH*RPLAPR
Trigger: CCTTGGAGCCAGGGGCCTGCAATGGCTCCAGGAACA...TCTGATGCCAATACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCAAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp CCAACATGGAAACAACTAGACGGGACACAGCACCGGGCAGTTTTATGTACTGACCAGTACCAGGGGTCATaGTCCCCAAGGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: PTWKQLDGTQHRAVLCTDQYQGS*SPRVSM
Trigger: CATGGAGACCCTTGGGGAGCATGACCCCTGGTACTG...GTCAGTACATAAAACTGCCCGGTGCTGTGTCCCGTCTAGTTGTTTCCATGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp GGTCTTCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCCGGGAGGCAGAAGTTaGAGTGAGCCAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: GLPVTSVHTTTYPFSVKNPGGRS*SEPRSR
Trigger: GCGCGATCTTGGCTCACTGCAACTTCTGCCTCCCGG...GTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR GCA 90 bp TCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGGAGTAAGCCGAGACTaGACCACCGCACTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SVHTTTYPFSVKNHKADQGVSRD*TTALQL
Trigger: AAGCTGGAGTGCGGTGGTGCAGTCTCGGCTTACTCC...CTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CCA 90 bp CATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCCCCCGCGTTGGAGTGTaGTCCTCATTAAGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: HTQRLCSSPFFGIHQTYSPRVGV*SSLRVQ
Trigger: TTGGACCCTTAATGAGGACCACACTCCAACGCGGGG...GGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp GTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGACTGCAAGGTCTGCCTaGGCCATGTGCCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: VHTTTYPFSVKNHKADQATARSA*AMCHLH
Trigger: ATGAAGATGGCACATGGCCCAGGCAGACCTTGCAGT...CGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CCA 90 bp AAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGACTCCCTGAAGTAGACTaGAAGCGTGACACATTCCGA +
Preference number: 4 (lower is better)
Translates to: KDVLLGDYTGATGWQDRGLPEVD*KRDTFR
Trigger: TCGGAATGTGTCACGCTTCCAGTCTACTTCAGGGAG...TCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp GTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCTTTGGGTGGTCTCACTaGGGTCATTTCCTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: VSKMFSWGITLALQGGRIFGWSH*GHFLAH
Trigger: ATGAGCCAGGAAATGACCCCAGTGAGACCACCCAAA...GATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp GTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCCTCTCAGGGCCACTGTaGTCTTCTTCTTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: VSKMFSWGITLALQGGRILSGPL*SSSSSE
Trigger: CTCAGAAGAAGAAGAAGACCACAGTGGCCCTGAGAG...GATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp CAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGGTTCAGCCCTCTGATTaGGAATTCTACGACTGTGTC +
Preference number: 4 (lower is better)
Translates to: QRCSPGGLHWRYRVAGSWVQPSD*EFYDCV
Trigger: GACACAGTCGTAGAATTCCCAATCAGAGGGCTGAAC...CCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp TCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCCCCATCCCACCGCTCCACAACTTTTCTaGCGATGGGTTGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SPFFGIHQTYSIEYPHPTAPQLF*RWVAGL
Trigger: AAGGCCAGCAACCCATCGTCAGAAAAGTTGTGGAGC...GGTGGGATGGGGGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp GTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGTCAATTACTAGCACCTaGCCCTGGTATAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: VHTTTYPFSVKNHKADQASITST*PWYSPA
Trigger: TGCTGGGCTATACCAGGGTCAGGTGCTAGTAATTGA...CGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR TCA 90 bp AAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGGTGCCATCTTCATTTTaGGGCTCAATTACTAGCACC +
Preference number: 4 (lower is better)
Translates to: KMFSWGITLALQGGRIVEVPSSF*GSITST
Trigger: GGTGCTAGTAATTGAGCCTCAAAATGAAGATGGCAC...CTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp GCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGAGGATGGTGGCTCCTaGCAATTATACGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: AECQRCSPGGLHWRYRVAEDGGS*QLYEAE
Trigger: TTCTGCTTCGTATAATTGTCAGGAGCCACCATCCTC...TGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp AAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGGAGGGTTGTCTCTGTTaGTTTCGGCTTCATACTCAT +
Preference number: 4 (lower is better)
Translates to: KMFSWGITLALQGGRIVEEGCLC*FRLHTH
Trigger: ATGAGTATGAAGCCGAAATCAACAGAGACAACCCTC...CTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp CATGCTGCAAGCCTCATCATCCCCAAAGCCCTGCTGAGAGCTGCTTGGTCGTGTTGTCATCCCGAGGCATaGTGTGGTTTAAACCTTCAT +
Preference number: 4 (lower is better)
Translates to: HAASLIIPKALLRAAWSCCHPEA*CGLNLH
Trigger: ATGAAGGTTTAAACCACATCATGCCTCGGGATGACA...ACACGACCAAGCAGCTCTCAGCAGGGCTTTGGGGATGATGAGGCTTGCAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR TCA 90 bp GTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCCACATAAGGCCTTGCTaGCAGGTTACAGACAAACTC +
Preference number: 4 (lower is better)
Translates to: VSKMFSWGITLALQGGRIHIRPC*QVTDKL
Trigger: GAGTTTGTCTGTAACCTGTCAGCAAGGCCTTATGTG...GATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp CATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCGATTGGACACGGCAATaGGGTCGTACACATAAGGCC +
Preference number: 4 (lower is better)
Translates to: HTQRLCSSPFFGIHQTYSDWTRQ*GRTHKA
Trigger: GGCCTTATGTGTACGACCTCATTGCCGTGTCCAATC...GGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp TGTTCTCAAGCCAACATGGAAACAACTAGACGGGACACAGCACCGGGCAGTTTTTCAGACATACTCCATTaGGTACCCCCATCCCACCCC +
Preference number: 4 (lower is better)
Translates to: CSQANMETTRRDTAPGSFSDILH*VPPSHP
Trigger: GGGGTGGGATGGGGGTACTCAATGGAGTATGTCTGA...AAAACTGCCCGGTGCTGTGTCCCGTCTAGTTGTTTCCATGTTGGCTTGAGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR TCA 90 bp TCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGGCAGGAGAATTGCTTaGACCCGGGAGGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: SVHTTTYPFSVKNHKADQGRRIA*TREAEV
Trigger: AACTTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCC...CTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR TCA 90 bp GTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGAAAATTAGCCAGATGTaGTGGCGCTACTCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: VHTTTYPFSVKNHKADQAKISQM*WRYSGS
Trigger: GCTTCCCGAGTAGCGCCATCACATCTGGCTAATTTT...CGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR TCA 90 bp TCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGCGCACTCCAGCTTGGTaGCAGAGTGAGACTCCATCT +
Preference number: 4 (lower is better)
Translates to: SVHTTTYPFSVKNHKADQRTPAW*QSETPS
Trigger: AGATGGAGTCTCACTCTGTCACCAAGCTGGAGTGCG...CTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR GCA 90 bp AGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGACATACTTCTTCCACTaGTTGAACCACCGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RVSKMFSWGITLALQGGRTYFFH*LNHRLS
Trigger: TGACAGCCGGTGGTTCAAGCAGTGGAAGAAGTATGT...CCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp GTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGACCTCGACTTTGCAGTaGTTGACAAACAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: VHTTTYPFSVKNHKADQATSTLQ*LTNRPC
Trigger: GCATGGCCTGTTTGTCAAGCACTGCAAAGTCGAGGT...CGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR GCA 90 bp GTCTCCAGGCTGCTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCAGGCCAGGGACACGTTaGTATCATCAAAGTAATACC +
Preference number: 4 (lower is better)
Translates to: VSRLLHTQRLCSSPFFGIRPGTR*YHQSNT
Trigger: GGTATTACTTTGATGATAGCAACGTGTCCCTGGCCT...GATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAGCAGCCTGGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp AGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATTAGTTGGTGTCCATaGTGCAAGCCTCATCATCCC +
Preference number: 4 (lower is better)
Translates to: RVSKMFSWGITLALQGGRISWCP*CKPHHP
Trigger: GGGATGATGAGGCTTGCAGCATGGACACCAACTAAT...CCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR GCA 90 bp GTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCATTAGTTGGTGTCCATaGTGCAAGCCTCATCATCCC +
Preference number: 4 (lower is better)
Translates to: VSKMFSWGITLALQGGRIISWCP*CKPHHP
Trigger: GGGATGATGAGGCTTGCAGCATGGACACCAACTAAT...GATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp GGTCTTCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACTGCGCCCCGCGTTaGAGTGTGGTCCTCATTAAG +
Preference number: 4 (lower is better)
Translates to: GLPVTSVHTTTYPFSVKNHCAPR*SVVLIK
Trigger: CTTAATGAGGACCACACTCCAACGCGGGGCGCAGTG...GTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGAAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CCA 90 bp AAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGATCTGCCTTGCTGAAATaGCAACTCAGCACATTGGTG +
Preference number: 4 (lower is better)
Translates to: KDVLLGDYTGATGWQDRGSALLK*QLSTLV
Trigger: CACCAATGTGCTGAGTTGCCATTTCAGCAAGGCAGA...TCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp AAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGATATAGCCCAGCATCCTaGACAGTGTTGTCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: KDVLLGDYTGATGWQDRGYSPAS*TVLSSL
Trigger: CAAGCTAGACAACACTGTCCAGGATGCTGGGCTATA...TCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp CTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGACTGCAAGGTCTGCCTaGGCCATGTGCCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: LSACVPLHSSGSIRHTPLTARSA*AMCHLH
Trigger: ATGAAGATGGCACATGGCCCAGGCAGACCTTGCAGT...CAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp GCCCTGCTGAGAGCTGCTTGGTCGTGTCCCTCCATCAGAGGAACCAGAACTGCTTCCCGAGGCATGATGTaGTTTAAACCTTCATCCATT +
Preference number: 4 (lower is better)
Translates to: ALLRAAWSCPSIRGTRTASRGMM*FKPSSI
Trigger: AATGGATGAAGGTTTAAACCACATCATGCCTCGGGA...AGCAGTTCTGGTTCCTCTGATGGAGGGACACGACCAAGCAGCTCTCAGCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR CCA 90 bp AAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGGGGTTAACTTGTGCTTaGGGACAGAAAGCAATAGTG +
Preference number: 4 (lower is better)
Translates to: KMFSWGITLALQGGRIVEGLTCA*GQKAIV
Trigger: CACTATTGCTTTCTGTCCCCAAGCACAAGTTAACCC...CTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp CCCGGGAAGAGTCTTGGCAGGGATGAGGAAAGAACCCGTTCTAGAAAGCATCTGTTTGGGTGGTCTCACTaGGGTCATTTCCTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: PGKSLGRDEERTRSRKHLFGWSH*GHFLAH
Trigger: ATGAGCCAGGAAATGACCCCAGTGAGACCACCCAAA...CAGATGCTTTCTAGAACGGGTTCTTTCCTCATCCCTGCCAAGACTCTTCCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CCA 90 bp GTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCCTTTTTGGGCAGGGCTaGCCTTTGATCTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: VSKMFSWGITLALQGGRILFGQG*PLIFFW
Trigger: CCAAAAGAAGATCAAAGGCCAGCCCTGCCCAAAAAG...GATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp GTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGATGCTTCTTACAGTTaGGACAGTACCAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: VSKMFSWGITLALQGGRIDASYS*DSTRGH
Trigger: ATGACCCCTGGTACTGTCCCAACTGTAAGAAGCATC...GATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp AGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATGGAGTCAGCATTAGTTaGTGTCCATGCTGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: SVKDVLLGDYTGATGWQDGVSIS*CPCCKP
Trigger: AGGCTTGCAGCATGGACACCAACTAATGCTGACTCC...ATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp GTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCTCAAAGATGTTCTCCTaGGGGATTACACTGGCGCTA +
Preference number: 4 (lower is better)
Translates to: VSKMFSWGITLALQGGRISKMFS*GITLAL
Trigger: TAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGA...GATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp ACAGGGTGGCAGGATCGTGGAGTCAGCATTAGTTGGTGTCCATGCTGCAAGCCTTCAAAGATGTTCTCCTaGGGGATTACACTGGCGCTA +
Preference number: 4 (lower is better)
Translates to: TGWQDRGVSISWCPCCKPSKMFS*GITLAL
Trigger: TAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGA...AGGCTTGCAGCATGGACACCAACTAATGCTGACTCCACGATCCTGCCACCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR CCA 90 bp GTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGAAAATTATCTGGACATaGTGGCGGGCGCCTGTCATC +
Preference number: 4 (lower is better)
Translates to: VHTTTYPFSVKNHKADQAKIIWT*WRAPVI
Trigger: GATGACAGGCGCCCGCCACCATGTCCAGATAATTTT...CGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR TCA 90 bp CCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTCCAAGCTCGGACTTCTaGGTCTCCGCATCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: PCLVFRQNTSSLQSVKDVPSSDF*VSASGR
Trigger: GCGACCGGATGCGGAGACTCAGAAGTCCGAGCTTGG...AACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp TGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTCAGTGTTCTTTCAAGGTCTaGCTCTCAGGATCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: CSPGGLHWRYRVAGSWSQCSFKV*LSGSEN
Trigger: ATTTTCAGATCCTGAGAGTCAGACCTTGAAAGAACA...CTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp GTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCCCCATCCGACTTTGCAGTGCTTaGCAAACAGGCCATGCTCCA +
Preference number: 4 (lower is better)
Translates to: VPLHSSGSIRHTPLSTPIRLCSA*QTGHAP
Trigger: TGGAGCATGGCCTGTTTGTCAAGCACTGCAAAGTCG...GATGGGGGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp CATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCTGGTGTCTGCCTTGCTaGAATGGCAACTCAGCACAT +
Preference number: 4 (lower is better)
Translates to: HTQRLCSSPFFGIHQTYSWCLPC*NGNSAH
Trigger: ATGTGCTGAGTTGCCATTTCAGCAAGGCAGACACCA...GGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp CATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCTCAATTACTAGCACCTaGCCCTGGTATAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: HTQRLCSSPFFGIHQTYSSITST*PWYSPA
Trigger: TGCTGGGCTATACCAGGGTCAGGTGCTAGTAATTGA...GGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp GTCTGCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGAGGATGGTGGCTCCTaGCAATTATACGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: VCRVSKMFSWGITLALQGEDGGS*QLYEAE
Trigger: TTCTGCTTCGTATAATTGTCAGGAGCCACCATCCTC...ACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGCAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp GCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCAGTAGACTGGAAGCGTaGCACATTCCGAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: ACVPLHSSGSIRHTPLSTSRLEA*HIPSHP
Trigger: TGGATGGCTCGGAATGTGTCACGCTTCCAGTCTACT...GGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp GCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCGCTTTAGTCACTATCTaGTCCTCAGAGGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: ACVPLHSSGSIRHTPLSTALVTI*SSEARD
Trigger: GTCCCTGGCCTCTGAGGATCAGATAGTGACTAAAGC...GGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp GTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTCAGCACCAGAACTGCTAAGTaGAGGTGTCTTATAAAATTC +
Preference number: 4 (lower is better)
Translates to: VLLGDYTGATGWQDRGVSTRTAK*RCLIKF
Trigger: GAATTTTATAAGACACCTTCACTTAGCAGTTCTGGT...GCTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR GCA 90 bp GTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGGGTTGCAATGGTGTCTaGCTTGCTGAAATGGCAACT +
Preference number: 4 (lower is better)
Translates to: VHTTTYPFSVKNHKADQAGCNGV*LAEMAT
Trigger: AGTTGCCATTTCAGCAAGGCAGACACCATTGCAACC...CGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR GCA 90 bp CACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGCAGCAGTGTTGTCTAGCTTaGTCAACTGCTCGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: HTTTYPFSVKNHKADQAQQCCLA*STARRC
Trigger: ACACCTACGAGCAGTTGAGCAAGCTAGACAACACTG...CTGCGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR GCA 90 bp TCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCCCCATCCCACCTCTGCCTGGGCCATGTaGCATCTTCATTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SPFFGIHQTYSIEYPHPTSAWAM*HLHFEA
Trigger: AGCCTCAAAATGAAGATGGCACATGGCCCAGGCAGA...GGTGGGATGGGGGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp GTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCTTCAGCATAGGCTTCTaGAATTTCCCCTTTCATCCC +
Preference number: 4 (lower is better)
Translates to: VSKMFSWGITLALQGGRIFSIGF*NFPFHP
Trigger: GGGATGAAAGGGGAAATTGCAGAAGCCTATGCTGAA...GATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR GCA 90 bp TCTGCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGACCACCATATTTTCTaGAGCAATGCCAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: SAECQRCSPGGLHWRYRVDHHIF*SNARQP
Trigger: AGGCTGTCTGGCATTGCTGCAGAAAATATGGTGGTC...CACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR GCA 90 bp CATGCTGCAAGCCTCATCATCCCCAAAGCCCTGCTGAGAGCTGCTTGGTCGTGTTCAAGGGTTAACTTGTaGTTGGGGACAGAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: HAASLIIPKALLRAAWSCSRVNL*LGTESN
Trigger: ATTGCTTTCTGTCCCCAAGCACAAGTTAACCCTTGA...ACACGACCAAGCAGCTCTCAGCAGGGCTTTGGGGATGATGAGGCTTGCAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR GCA 90 bp CTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACGCTCCAAGGGTGAGCTaGCAAACTCATCAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: LHTQRLCSSPFFGIHQTYAPRVS*QTHQVK
Trigger: CTTTACCTGATGAGTTTGGCAGCTCACCCTTGGAGC...GTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp GGGTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCATGTTCCTGGAGCCATTaGAGGCCCCTGGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: GYFLVWFLDRTLAVCRVSCSWSH*RPLAPR
Trigger: CCTTGGAGCCAGGGGCCTGCAATGGCTCCAGGAACA...TGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR GCA 90 bp GTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCAGGCCAGGGACACGTTaGTATCATCAAAGTAATACC +
Preference number: 4 (lower is better)
Translates to: VSKMFSWGITLALQGGRIRPGTR*YHQSNT
Trigger: GGTATTACTTTGATGATAGCAACGTGTCCCTGGCCT...GATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp CATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCAGTTGGTGTCCATGCTaGAAGCCTCATCATCCCCAA +
Preference number: 4 (lower is better)
Translates to: HTQRLCSSPFFGIHQTYSSWCPC*KPHHPQ
Trigger: TTGGGGATGATGAGGCTTGCAGCATGGACACCAACT...GGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp TTACTTGAGGTTTGGGTTACTGTGAGCAGACTACTTGGGGTGACTAGTATTGGCCACTGCGCCCCGCGTTaGAGTGTGGTCCTCATTAAG +
Preference number: 4 (lower is better)
Translates to: LLEVWVTVSRLLGVTSIGHCAPR*SVVLIK
Trigger: CTTAATGAGGACCACACTCCAACGCGGGGCGCAGTG...GCCAATACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCAAACCTCAAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp TCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGGCAACTCAGCACATTaGTGGGGTCACTGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SVHTTTYPFSVKNHKADQGNSAH*WGHCSH
Trigger: GTGAGAACAGTGACCCCACCAATGTGCTGAGTTGCC...CTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CCA 90 bp GTCTGCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGCATCTCTTTCTCGATaGTTGCAATGGTGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VCRVSKMFSWGITLALQGASLSR*LQWCLP
Trigger: AGGCAGACACCATTGCAACCATCGAGAAAGAGATGC...ACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGCAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp AGGCTGGCGGATCATGAGGTCACGATCACAAGGTCAGGAATTCAAGACCAGCCTTATAGCCCAGCATCCTaGACAGTGTTGTCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: RLADHEVTITRSGIQDQPYSPAS*TVLSSL
Trigger: CAAGCTAGACAACACTGTCCAGGATGCTGGGCTATA...AGGCTGGTCTTGAATTCCTGACCTTGTGATCGTGACCTCATGATCCGCCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CCA 90 bp GGGTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAATGCGAGGTGCCACATaGGCGTCCCTTCCAGACCAC +
Preference number: 4 (lower is better)
Translates to: GYFLVWFLDRTLAVCRVSMRGAT*ASLPDH
Trigger: GTGGTCTGGAAGGGACGCCCATGTGGCACCTCGCAT...TGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp GAGGTTTGGGTTACTGTGAGCAGACTACTTGGGGTGACTAGTATTGGCATCAGACATCTGGCCGCCCATTaGCATCCTTCAGCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: EVWVTVSRLLGVTSIGIRHLAAH*HPSAPS
Trigger: ACTTGGAGCTGAAGGATGCCAATGGGCGGCCAGATG...TCTGATGCCAATACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCAAACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp AAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTCCCGAGGCATGATGTaGTTTAAACCTTCATCCATT +
Preference number: 4 (lower is better)
Translates to: KMFSWGITLALQGGRIVESRGMM*FKPSSI
Trigger: AATGGATGAAGGTTTAAACCACATCATGCCTCGGGA...CTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp ACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGGACCACCAGGATCTTaGGCAAGGACCATAGGTCAA +
Preference number: 4 (lower is better)
Translates to: TQRLCSSPFFGIHQTYSIGPPGS*ARTIGQ
Trigger: TTGACCTATGGTCCTTGCCCAAGATCCTGGTGGTCC...AATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp GTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTCAGCGGGTATTTCCTTGTCTaGTTTTTAGACAGAACACTA +
Preference number: 4 (lower is better)
Translates to: VLLGDYTGATGWQDRGVSGYFLV*FLDRTL
Trigger: TAGTGTTCTGTCTAAAAACCAGACAAGGAAATACCC...GCTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp CGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACTCAATTACTAGCACCTaGCCCTGGTATAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RLCSSPFFGIHQTYSIEYSITST*PWYSPA
Trigger: TGCTGGGCTATACCAGGGTCAGGTGCTAGTAATTGA...GTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp TCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAAGGCAGAAGTTGCAGTaGGCCAAGATCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: SCHISPHHHIPFQCEKPQRQKLQ*AKIAPL
Trigger: CAATGGCGCGATCTTGGCTCACTGCAACTTCTGCCT...TTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR TCA 90 bp TCTTCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCAAGACCAGCCTGGCCATaGGGTCAGGAGTTCAAGACA +
Preference number: 4 (lower is better)
Translates to: SSCHISPHHHIPFQCEKPRPAWP*GQEFKT
Trigger: TGTCTTGAACTCCTGACCTCATGGCCAGGCTGGTCT...TGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR GCA 90 bp AGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATTTGACAAACAGGCCATaGTCCACAACTTTTCTGACG +
Preference number: 4 (lower is better)
Translates to: SVKDVLLGDYTGATGWQDLTNRP*STTFLT
Trigger: CGTCAGAAAAGTTGTGGAGCATGGCCTGTTTGTCAA...ATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp CACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGCAGTTGACAAACAGGCCATaGTCCACAACTTTTCTGACG +
Preference number: 4 (lower is better)
Translates to: HTTTYPFSVKNHKADQAQLTNRP*STTFLT
Trigger: CGTCAGAAAAGTTGTGGAGCATGGCCTGTTTGTCAA...CTGCGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR GCA 90 bp TGTTCTCAAGCCAACATGGAAACAACTAGACGGGACACAGCACCGGGCAGTTTTACCTCGACTTTGCAGTaGTTGACAAACAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: CSQANMETTRRDTAPGSFTSTLQ*LTNRPC
Trigger: GCATGGCCTGTTTGTCAAGCACTGCAAAGTCGAGGT...AAAACTGCCCGGTGCTGTGTCCCGTCTAGTTGTTTCCATGTTGGCTTGAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp CATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCGGTTGCAATGGTGTCTaGCTTGCTGAAATGGCAACT +
Preference number: 4 (lower is better)
Translates to: HTQRLCSSPFFGIHQTYSGCNGV*LAEMAT
Trigger: AGTTGCCATTTCAGCAAGGCAGACACCATTGCAACC...GGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp GCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCGTGCTTGATTTTGACTaGAAGGTCTGCCTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: ACVPLHSSGSIRHTPLSTVLDFD*KVCLGH
Trigger: ATGGCCCAGGCAGACCTTGCAGTCAAAATCAAGCAC...GGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp TCTGCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGAGTGCTATCACCATTTaGAATGAGAGAGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: SAECQRCSPGGLHWRYRVSAITI*NERGRH
Trigger: GTGTCTGCCTCTCTCATTGCAAATGGTGATAGCACT...CACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000431357.1
CDS-3UTR GCA 90 bp AGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATAGTGCTATCACCATTTaGAATGAGAGAGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: SVKDVLLGDYTGATGWQDSAITI*NERGRH
Trigger: GTGTCTGCCTCTCTCATTGCAAATGGTGATAGCACT...ATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000431357.1
CDS-3UTR GCA 90 bp TGTTCTCAAGCCAACATGGAAACAACTAGACGGGACACAGCACCGGGCAGTTTTTCAGTGGTGCAGTGTTaGTCAAACACTGCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: CSQANMETTRRDTAPGSFSVVQC*SNTAKR
Trigger: CCGCTTTGCAGTGTTTGAGCAACACTGCACCACTGA...AAAACTGCCCGGTGCTGTGTCCCGTCTAGTTGTTTCCATGTTGGCTTGAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp TCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTCAGCATTAGTGATTATACACATCTaGGACCACCATATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SWGITLALQGGRIVESALVIIHI*DHHIFC
Trigger: GCAGAAAATATGGTGGTCGCAGATGTGTATAATCAC...TAATGCTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR GCA 90 bp TTACTTGAGGTTTGGGTTACTGTGAGCAGACTACTTGGGGTGACTAGTATTGGCAGCCATCCACGGAAGTaGTGCAGACCTCGTACACGA +
Preference number: 4 (lower is better)
Translates to: LLEVWVTVSRLLGVTSIGSHPRK*CRPRTR
Trigger: TCGTGTACGAGGTCTGCAGCACTTCCGTGGATGGCT...GCCAATACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCAAACCTCAAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp ACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTAGTTGGTGTCCATGCTaGAAGCCTCATCATCCCCAA +
Preference number: 4 (lower is better)
Translates to: TQRLCSSPFFGIHQTYSISWCPC*KPHHPQ
Trigger: TTGGGGATGATGAGGCTTGCAGCATGGACACCAACT...AATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp TCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCCCCATCCCACCTCTGCCTTGCTGAAATaGCAACTCAGCACATTGGTG +
Preference number: 4 (lower is better)
Translates to: SPFFGIHQTYSIEYPHPTSALLK*QLSTLV
Trigger: CACCAATGTGCTGAGTTGCCATTTCAGCAAGGCAGA...GGTGGGATGGGGGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp GTCTCCAGGCTGCTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCTATATGAGAGGATGGTaGCTCCTGACAATTATACGA +
Preference number: 4 (lower is better)
Translates to: VSRLLHTQRLCSSPFFGIYMRGW*LLTIIR
Trigger: TCGTATAATTGTCAGGAGCCACCATCCTCTCATATA...GATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAGCAGCCTGGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp CTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGGGTAAAAAGCCTTTTTaGGCAGGGCTGGCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: LSACVPLHSSGSIRHTPLGKKPF*AGLAFD
Trigger: ATCAAAGGCCAGCCCTGCCCAAAAAGGCTTTTTACC...CAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp AGTGCACATAGCGAGGGAAAGGGGAGTTTACTTGAGGTTTGGGTTACTGTGAGCCTCTCAGGGCCACTGTaGTCTTCTTCTTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SAHSEGKGSLLEVWVTVSLSGPL*SSSSSE
Trigger: CTCAGAAGAAGAAGAAGACCACAGTGGCCCTGAGAG...GCTCACAGTAACCCAAACCTCAAGTAAACTCCCCTTTCCCTCGCTATGTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CCA 90 bp CTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACGTTCAGCCCTCTGATTaGGAATTCTACGACTGTGTC +
Preference number: 4 (lower is better)
Translates to: LHTQRLCSSPFFGIHQTYVQPSD*EFYDCV
Trigger: GACACAGTCGTAGAATTCCCAATCAGAGGGCTGAAC...GTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp TCTTCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACGACTTTGCAGTGCTTaGCAAACAGGCCATGCTCCA +
Preference number: 4 (lower is better)
Translates to: SSCHISPHHHIPFQCEKPRLCSA*QTGHAP
Trigger: TGGAGCATGGCCTGTTTGTCAAGCACTGCAAAGTCG...TGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR TCA 90 bp TGCTGGGTTCCACAGGAGGTTGAGGGGCCAGGATCCCCAACACTAGATATCTTCCTTCATACTCATCTTTaGGAAAGTAGTCAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: CWVPQEVEGPGSPTLDIFLHTHL*ESSQSV
Trigger: CACTGACTGACTACTTTCTCAAAGATGAGTATGAAG...GAAGATATCTAGTGTTGGGGATCCTGGCCCCTCAACCTCCTGTGGAACCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR TCA 90 bp ACAGGGTGGCAGGATCGTGGAGTCAGCATTAGTTGGTGTCCATGCTGCAAGCCTCTTCATACTCATCTTTaGGAAAGTAGTCAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: TGWQDRGVSISWCPCCKPLHTHL*ESSQSV
Trigger: CACTGACTGACTACTTTCTCAAAGATGAGTATGAAG...AGGCTTGCAGCATGGACACCAACTAATGCTGACTCCACGATCCTGCCACCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR TCA 90 bp CCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTTGCGGAGGAAGTGCTTaGTGGCCTGGACTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: PCLVFRQNTSSLQSVKDVCGGSA*WPGLPL
Trigger: GAGAGGAAGTCCAGGCCATCAAGCACTTCCTCCGCA...AACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp TTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGGGGTCTCCATGGTGGTaGAGAGCTCGATGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: FLVWFLDRTLAVCRVSKMGSPWW*RARCSL
Trigger: GAGACTGCATCGAGCTCTTCACCACCATGGAGACCC...CATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp AAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGACCAGAACTGCTAAGTaGAGGTGTCTTATAAAATTC +
Preference number: 4 (lower is better)
Translates to: KMFSWGITLALQGGRIVETRTAK*RCLIKF
Trigger: GAATTTTATAAGACACCTTCACTTAGCAGTTCTGGT...CTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp CTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACAAAGGGGAGTTTACTTaGGGTTTGGGTTACTGTGAG +
Preference number: 4 (lower is better)
Translates to: LHTQRLCSSPFFGIHQTYKGEFT*GLGYCE
Trigger: CTCACAGTAACCCAAACCTCAAGTAAACTCCCCTTT...GTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp TCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGCATACCCTTTCAGTGTaGAAAACCACAAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: SVHTTTYPFSVKNHKADQHTLSV*KTTRLT
Trigger: GGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATG...CTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR GCA 90 bp TCTTCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCATCAATAAGATACCACTaGGCCCCGCGTTGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: SSCHISPHHHIPFQCEKPSIRYH*APRWSV
Trigger: CACACTCCAACGCGGGGCGCAGTGGTATCTTATTGA...TGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR GCA 90 bp TCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAATTTCTGACGATGGGTTaGTGGCCTTCTACACAGCCG +
Preference number: 4 (lower is better)
Translates to: SCHISPHHHIPFQCEKPQFLTMG*WPSTQP
Trigger: CGGCTGTGTAGAAGGCCAGCAACCCATCGTCAGAAA...TTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR GCA 90 bp CACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGCAGACTGCTCGTAGGTGTTaGTCATGTATTTGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: HTTTYPFSVKNHKADQAQTARRC*SCICSR
Trigger: TCTGGAACAAATACATGAGCAACACCTACGAGCAGT...CTGCGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR GCA 90 bp GAGGTTTGGGTTACTGTGAGCAGACTACTTGGGGTGACTAGTATTGGCATCAGACATCCACGGAAGTGCTaGAGACCTCGTACACGAAAA +
Preference number: 4 (lower is better)
Translates to: EVWVTVSRLLGVTSIGIRHPRKC*RPRTRK
Trigger: TTTTCGTGTACGAGGTCTGCAGCACTTCCGTGGATG...TCTGATGCCAATACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCAAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp TTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGAGCCCTGCTGAGAGCTaGTTGGTCGTGTCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: FLVWFLDRTLAVCRVSKMSPAES*LVVSLH
Trigger: ATGGAGGGACACGACCAAGCAGCTCTCAGCAGGGCT...CATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp CTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTCCACTGCGCCCCGCGTTaGAGTGTGGTCCTCATTAAG +
Preference number: 4 (lower is better)
Translates to: LVWFLDRTLAVCRVSKMFHCAPR*SVVLIK
Trigger: CTTAATGAGGACCACACTCCAACGCGGGGCGCAGTG...GAACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp AAGCCTCATCATCCCCAAAGCCCTGCTGAGAGCTGCTTGGTCGTGTCCCTCCATTTGTATATGAGAGGATaGTGGCTCCTGACAATTATA +
Preference number: 4 (lower is better)
Translates to: KPHHPQSPAESCLVVSLHLYMRG*WLLTII
Trigger: TATAATTGTCAGGAGCCACCATCCTCTCATATACAA...ATGGAGGGACACGACCAAGCAGCTCTCAGCAGGGCTTTGGGGATGATGAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR CCA 90 bp AAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGAACCTTAGCACATTCTaGGCAAACCAAAGTAGATTT +
Preference number: 4 (lower is better)
Translates to: KMFSWGITLALQGGRIVENLSTF*ANQSRF
Trigger: AAATCTACTTTGGTTTGCCCAGAATGTGCTAAGGTT...CTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp TGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTCAGAAACCTTCATCCATTTaGAAAATTTTGTGGAATCGG +
Preference number: 4 (lower is better)
Translates to: CSPGGLHWRYRVAGSWSQKPSSI*KILWNR
Trigger: CCGATTCCACAAAATTTTCCAAATGGATGAAGGTTT...CTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp GGTGGGTCTCCAGGCTGCTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGAAACCTTCATCCATTTaGAAAATTTTGTGGAATCGG +
Preference number: 4 (lower is better)
Translates to: GGSPGCSILSACVPLHSSKPSSI*KILWNR
Trigger: CCGATTCCACAAAATTTTCCAAATGGATGAAGGTTT...CGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAGCAGCCTGGAGACCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp GGAAGAGTCTTGGCAGGGATGAGGAAAGAACCCGTTCTAGAAAGCATCTGGGTATCAAAGATGTTCTCCTaGGGGATTACACTGGCGCTA +
Preference number: 4 (lower is better)
Translates to: GRVLAGMRKEPVLESIWVSKMFS*GITLAL
Trigger: TAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGA...TACCCAGATGCTTTCTAGAACGGGTTCTTTCCTCATCCCTGCCAAGACTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR TCA 90 bp TCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAATGGTGTCTGCCTTGCTaGAATGGCAACTCAGCACAT +
Preference number: 4 (lower is better)
Translates to: SCHISPHHHIPFQCEKPQWCLPC*NGNSAH
Trigger: ATGTGCTGAGTTGCCATTTCAGCAAGGCAGACACCA...TTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR TCA 90 bp GGGTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAGCTCCGCAGGGATGTTaGATAGCTTCCGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: GYFLVWFLDRTLAVCRVSAPQGC*IASASL
Trigger: AAGAGATGCGGAAGCTATTCAACATCCCTGCGGAGC...TGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp GTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCCCCATCGTGCCATCTTCATTTTaGGGCTCAATTACTAGCACC +
Preference number: 4 (lower is better)
Translates to: VPLHSSGSIRHTPLSTPIVPSSF*GSITST
Trigger: GGTGCTAGTAATTGAGCCTCAAAATGAAGATGGCAC...GATGGGGGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp ACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTTCTTTGCCTTCTTCCTaGTGCTCCATTTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: TQRLCSSPFFGIHQTYSISLPSS*CSISSS
Trigger: TGAGGAAGAAATGGAGCATCAGGAAGAAGGCAAAGA...AATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp TGGGTTACTGTGAGCAGACTACTTGGGGTGACTAGTATTGGCATCAGAACCAGAACATACTTCTTCCACTaGTTGAACCACCGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: WVTVSRLLGVTSIGIRTRTYFFH*LNHRLS
Trigger: TGACAGCCGGTGGTTCAAGCAGTGGAAGAAGTATGT...TCTGGTTCTGATGCCAATACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp TCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAATCTGCCTGGGCCATGTaGCATCTTCATTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SCHISPHHHIPFQCEKPQSAWAM*HLHFEA
Trigger: AGCCTCAAAATGAAGATGGCACATGGCCCAGGCAGA...TTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR GCA 90 bp CCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTCTGACACCGGAACTGTaGATCCCACAGGTGCTAGTG +
Preference number: 4 (lower is better)
Translates to: PCLVFRQNTSSLQSVKDVLTPEL*IPQVLV
Trigger: CACTAGCACCTGTGGGATGCACAGTTCCGGTGTCAG...AACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000431357.1
CDS-3UTR GCA 90 bp TTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTTGAACATGCGAGGTaGCACATGGGCGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: FLVWFLDRTLAVCRVSKMFEHAR*HMGVPS
Trigger: GGAAGGGACGCCCATGTGGCACCTCGCATGTTCAAA...CATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR GCA 90 bp CCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTAGCCATCCACGGAAGTaGTGCAGACCTCGTACACGA +
Preference number: 4 (lower is better)
Translates to: PCLVFRQNTSSLQSVKDVSHPRK*CRPRTR
Trigger: TCGTGTACGAGGTCTGCAGCACTTCCGTGGATGGCT...AACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR GCA 90 bp CATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCTCAAGGGTTAACTTGTaGTTGGGGACAGAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: HTQRLCSSPFFGIHQTYSSRVNL*LGTESN
Trigger: ATTGCTTTCTGTCCCCAAGCACAAGTTAACCCTTGA...GGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp TGGGTTACTGTGAGCAGACTACTTGGGGTGACTAGTATTGGCATCAGAACCAGAATTAGTTGGTGTCCATaGTGCAAGCCTCATCATCCC +
Preference number: 4 (lower is better)
Translates to: WVTVSRLLGVTSIGIRTRISWCP*CKPHHP
Trigger: GGGATGATGAGGCTTGCAGCATGGACACCAACTAAT...TCTGGTTCTGATGCCAATACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp AGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATTATATGAGAGGATGGTaGCTCCTGACAATTATACGA +
Preference number: 4 (lower is better)
Translates to: SVKDVLLGDYTGATGWQDYMRGW*LLTIIR
Trigger: TCGTATAATTGTCAGGAGCCACCATCCTCTCATATA...ATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp CTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTCACTGGGGTCATTTCCTaGCTCATCTTCCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: LVWFLDRTLAVCRVSKMFTGVIS*LIFPTA
Trigger: GGCAGTGGGGAAGATGAGCCAGGAAATGACCCCAGT...GAACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp TGGGTTACTGTGAGCAGACTACTTGGGGTGACTAGTATTGGCATCAGAACCAGACTTTTTGGGCAGGGCTaGCCTTTGATCTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: WVTVSRLLGVTSIGIRTRLFGQG*PLIFFW
Trigger: CCAAAAGAAGATCAAAGGCCAGCCCTGCCCAAAAAG...TCTGGTTCTGATGCCAATACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp TGGGTTACTGTGAGCAGACTACTTGGGGTGACTAGTATTGGCATCAGAACCAGAGATGCTTCTTACAGTTaGGACAGTACCAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: WVTVSRLLGVTSIGIRTRDASYS*DSTRGH
Trigger: ATGACCCCTGGTACTGTCCCAACTGTAAGAAGCATC...TCTGGTTCTGATGCCAATACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp CTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTCCGACTTTGCAGTGCTTaGCAAACAGGCCATGCTCCA +
Preference number: 4 (lower is better)
Translates to: LVWFLDRTLAVCRVSKMFRLCSA*QTGHAP
Trigger: TGGAGCATGGCCTGTTTGTCAAGCACTGCAAAGTCG...GAACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp CCCGGGAAGAGTCTTGGCAGGGATGAGGAAAGAACCCGTTCTAGAAAGCATCTGACCAGAACTGCTAAGTaGAGGTGTCTTATAAAATTC +
Preference number: 4 (lower is better)
Translates to: PGKSLGRDEERTRSRKHLTRTAK*RCLIKF
Trigger: GAATTTTATAAGACACCTTCACTTAGCAGTTCTGGT...CAGATGCTTTCTAGAACGGGTTCTTTCCTCATCCCTGCCAAGACTCTTCCCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR TCA 90 bp CTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACGGCAGTTTTATGTACTaGCTTCCTTTAAGCGTTATC +
Preference number: 4 (lower is better)
Translates to: LHTQRLCSSPFFGIHQTYGSFMY*LPLSVI
Trigger: GATAACGCTTAAAGGAAGTCAGTACATAAAACTGCC...GTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR TCA 90 bp TCTTCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCAAAAGAACGAAACTTTTaGCTGCAAGGTCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SSCHISPHHHIPFQCEKPKERNF*LQGLPG
Trigger: CCCAGGCAGACCTTGCAGTCAAAAGTTTCGTTCTTT...TGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR GCA 90 bp TTACTTGAGGTTTGGGTTACTGTGAGCAGACTACTTGGGGTGACTAGTATTGGCCAGTGTTGTCTAGCTTaGTCAACTGCTCGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: LLEVWVTVSRLLGVTSIGQCCLA*STARRC
Trigger: ACACCTACGAGCAGTTGAGCAAGCTAGACAACACTG...GCCAATACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCAAACCTCAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp GGGTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCATCAGTGGTGCAGTGTTaGTCAAACACTGCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: GYFLVWFLDRTLAVCRVSSVVQC*SNTAKR
Trigger: CCGCTTTGCAGTGTTTGAGCAACACTGCACCACTGA...TGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR GCA 90 bp TCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCCCCATCCCACCCGGTTCAGATCTTCATaGAATCCATCTAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: SPFFGIHQTYSIEYPHPTRFRSS*NPSRRK
Trigger: CTTTCTTCTAGATGGATTGCATGAAGATCTGAACCG...GGTGGGATGGGGGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp GTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCCCCATCTCAAGGGTTAACTTGTaGTTGGGGACAGAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: VPLHSSGSIRHTPLSTPISRVNL*LGTESN
Trigger: ATTGCTTTCTGTCCCCAAGCACAAGTTAACCCTTGA...GATGGGGGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp TCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAAACGAAACTTTTGACTaGAAGGTCTGCCTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: SCHISPHHHIPFQCEKPQNETFD*KVCLGH
Trigger: ATGGCCCAGGCAGACCTTGCAGTCAAAAGTTTCGTT...TTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CCA 90 bp CCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTGGCAACTCAGCACATTaGTGGGGTCACTGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: PCLVFRQNTSSLQSVKDVGNSAH*WGHCSH
Trigger: GTGAGAACAGTGACCCCACCAATGTGCTGAGTTGCC...AACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp TCTTCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCATCTGCCTTGCTGAAATaGCAACTCAGCACATTGGTG +
Preference number: 4 (lower is better)
Translates to: SSCHISPHHHIPFQCEKPSALLK*QLSTLV
Trigger: CACCAATGTGCTGAGTTGCCATTTCAGCAAGGCAGA...TGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CCA 90 bp TCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGCATCTCTTTCTCGATaGTTGCAATGGTGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SCHISPHHHIPFQCEKPQASLSR*LQWCLP
Trigger: AGGCAGACACCATTGCAACCATCGAGAAAGAGATGC...TTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CCA 90 bp AAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAAAACCTTCATCCATTTaGAAAATTTTGTGGAATCGG +
Preference number: 4 (lower is better)
Translates to: KDVLLGDYTGATGWQDRGKPSSI*KILWNR
Trigger: CCGATTCCACAAAATTTTCCAAATGGATGAAGGTTT...TCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp TGTTCTCAAGCCAACATGGAAACAACTAGACGGGACACAGCACCGGGCAGTTTTTCCCGAGGCATGATGTaGTTTAAACCTTCATCCATT +
Preference number: 4 (lower is better)
Translates to: CSQANMETTRRDTAPGSFSRGMM*FKPSSI
Trigger: AATGGATGAAGGTTTAAACCACATCATGCCTCGGGA...AAAACTGCCCGGTGCTGTGTCCCGTCTAGTTGTTTCCATGTTGGCTTGAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CCA 90 bp TTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGGGACCACCAGGATCTTaGGCAAGGACCATAGGTCAA +
Preference number: 4 (lower is better)
Translates to: FLVWFLDRTLAVCRVSKMGPPGS*ARTIGQ
Trigger: TTGACCTATGGTCCTTGCCCAAGATCCTGGTGGTCC...CATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp TTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGGAGAAACGTTTGAGGTaGACCACCAGGATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: FLVWFLDRTLAVCRVSKMEKRLR*TTRILG
Trigger: GCCCAAGATCCTGGTGGTCCACCTCAAACGTTTCTC...CATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp CCAACATGGAAACAACTAGACGGGACACAGCACCGGGCAGTTTTATGTACTGACTGTTCTTTCAAGGTCTaGCTCTCAGGATCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: PTWKQLDGTQHRAVLCTDCSFKV*LSGSEN
Trigger: ATTTTCAGATCCTGAGAGTCAGACCTTGAAAGAACA...GTCAGTACATAAAACTGCCCGGTGCTGTGTCCCGTCTAGTTGTTTCCATGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR TCA 90 bp TCTTCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCAGTGCCATCTTCATTTTaGGGCTCAATTACTAGCACC +
Preference number: 4 (lower is better)
Translates to: SSCHISPHHHIPFQCEKPVPSSF*GSITST
Trigger: GGTGCTAGTAATTGAGCCTCAAAATGAAGATGGCAC...TGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR TCA 90 bp CGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCTTCATACTCATCTTTaGGAAAGTAGTCAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: RLCSSPFFGIHQTYSIEYLHTHL*ESSQSV
Trigger: CACTGACTGACTACTTTCTCAAAGATGAGTATGAAG...GTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR TCA 90 bp AACTCCCACAAAGATTTCTGTTCTCAAGCCAACATGGAAACAACTAGACGGGACGCAGACTACTTGGGGTaGCTAGTATTGGCATCAGAA +
Preference number: 4 (lower is better)
Translates to: NSHKDFCSQANMETTRRDADYLG*LVLASE
Trigger: TTCTGATGCCAATACTAGTCACCCCAAGTAGTCTGC...GTCCCGTCTAGTTGTTTCCATGTTGGCTTGAGAACAGAAATCTTTGTGGGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR GCA 90 bp GTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAATCAATAAGATACCACTaGGCCCCGCGTTGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: VFPCLVFRQNTSSLQSVKSIRYH*APRWSV
Trigger: CACACTCCAACGCGGGGCGCAGTGGTATCTTATTGA...TTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp CCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTACCTCGACTTTGCAGTaGTTGACAAACAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: PCLVFRQNTSSLQSVKDVTSTLQ*LTNRPC
Trigger: GCATGGCCTGTTTGTCAAGCACTGCAAAGTCGAGGT...AACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp AGTGCACATAGCGAGGGAAAGGGGAGTTTACTTGAGGTTTGGGTTACTGTGAGCCGGTTCAGATCTTCATaGAATCCATCTAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: SAHSEGKGSLLEVWVTVSRFRSS*NPSRRK
Trigger: CTTTCTTCTAGATGGATTGCATGAAGATCTGAACCG...GCTCACAGTAACCCAAACCTCAAGTAAACTCCCCTTTCCCTCGCTATGTGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CCA 90 bp CTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTTGTATATGAGAGGATaGTGGCTCCTGACAATTATA +
Preference number: 4 (lower is better)
Translates to: LHTQRLCSSPFFGIHQTYLYMRG*WLLTII
Trigger: TATAATTGTCAGGAGCCACCATCCTCTCATATACAA...GTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp CCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTCTCCCTGAAGTAGACTaGAAGCGTGACACATTCCGA +
Preference number: 4 (lower is better)
Translates to: PCLVFRQNTSSLQSVKDVLPEVD*KRDTFR
Trigger: TCGGAATGTGTCACGCTTCCAGTCTACTTCAGGGAG...AACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp TTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTTGGGTGGTCTCACTaGGGTCATTTCCTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: FLVWFLDRTLAVCRVSKMFGWSH*GHFLAH
Trigger: ATGAGCCAGGAAATGACCCCAGTGAGACCACCCAAA...CATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp CCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTCTCTCAGGGCCACTGTaGTCTTCTTCTTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: PCLVFRQNTSSLQSVKDVLSGPL*SSSSSE
Trigger: CTCAGAAGAAGAAGAAGACCACAGTGGCCCTGAGAG...AACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp GGGTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAGATGCTTCTTACAGTTaGGACAGTACCAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: GYFLVWFLDRTLAVCRVSDASYS*DSTRGH
Trigger: ATGACCCCTGGTACTGTCCCAACTGTAAGAAGCATC...TGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp CCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTAGTGGCCAACCCCCATaGCTCCATAATGATTGGACA +
Preference number: 4 (lower is better)
Translates to: PCLVFRQNTSSLQSVKDVSGQPP*LHNDWT
Trigger: TGTCCAATCATTATGGAGCCATGGGGGTTGGCCACT...AACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp GTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCCCCATCAGTTTACTTGAGGTTTaGGTTACTGTGAGCAGACTA +
Preference number: 4 (lower is better)
Translates to: VPLHSSGSIRHTPLSTPISLLEV*VTVSRL
Trigger: TAGTCTGCTCACAGTAACCCAAACCTCAAGTAAACT...GATGGGGGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp TTACTTGAGGTTTGGGTTACTGTGAGCAGACTACTTGGGGTGACTAGTATTGGCGTTCTCAAGCCAACATaGAAACAACTAGACGGGACA +
Preference number: 4 (lower is better)
Translates to: LLEVWVTVSRLLGVTSIGVLKPT*KQLDGT
Trigger: TGTCCCGTCTAGTTGTTTCCATGTTGGCTTGAGAAC...GCCAATACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCAAACCTCAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CCA 90 bp TCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAAATACAAAATTAGGCTaGGTGAGGTGGCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: SCHISPHHHIPFQCEKPQNTKLG*VRWLTL
Trigger: AAGGGTGAGCCACCTCACCCAGCCTAATTTTGTATT...TTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR TCA 90 bp GGGTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAGAGGGTTGTCTCTGTTaGTTTCGGCTTCATACTCAT +
Preference number: 4 (lower is better)
Translates to: GYFLVWFLDRTLAVCRVSEGCLC*FRLHTH
Trigger: ATGAGTATGAAGCCGAAATCAACAGAGACAACCCTC...TGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR GCA 90 bp GTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAATCTGCCTGGGCCATGTaGCATCTTCATTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VFPCLVFRQNTSSLQSVKSAWAM*HLHFEA
Trigger: AGCCTCAAAATGAAGATGGCACATGGCCCAGGCAGA...TTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp GTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAAGTTGGTGTCCATGCTaGAAGCCTCATCATCCCCAA +
Preference number: 4 (lower is better)
Translates to: VFPCLVFRQNTSSLQSVKSWCPC*KPHHPQ
Trigger: TTGGGGATGATGAGGCTTGCAGCATGGACACCAACT...TTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp GCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCAACCTTAGCACATTCTaGGCAAACCAAAGTAGATTT +
Preference number: 4 (lower is better)
Translates to: ACVPLHSSGSIRHTPLSTNLSTF*ANQSRF
Trigger: AAATCTACTTTGGTTTGCCCAGAATGTGCTAAGGTT...GGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp GGGTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAGGGTTAACTTGTGCTTaGGGACAGAAAGCAATAGTG +
Preference number: 4 (lower is better)
Translates to: GYFLVWFLDRTLAVCRVSGLTCA*GQKAIV
Trigger: CACTATTGCTTTCTGTCCCCAAGCACAAGTTAACCC...TGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp CCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTCTTTTTGGGCAGGGCTaGCCTTTGATCTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: PCLVFRQNTSSLQSVKDVLFGQG*PLIFFW
Trigger: CCAAAAGAAGATCAAAGGCCAGCCCTGCCCAAAAAG...AACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp TTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTGTCATCCCGAGGCATaGTGTGGTTTAAACCTTCAT +
Preference number: 4 (lower is better)
Translates to: FLVWFLDRTLAVCRVSKMCHPEA*CGLNLH
Trigger: ATGAAGGTTTAAACCACATCATGCCTCGGGATGACA...CATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp CTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTCTGTCATCCCGAGGCATaGTGTGGTTTAAACCTTCAT +
Preference number: 4 (lower is better)
Translates to: LVWFLDRTLAVCRVSKMFCHPEA*CGLNLH
Trigger: ATGAAGGTTTAAACCACATCATGCCTCGGGATGACA...GAACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR TCA 90 bp TCTTCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCAGAGTTCAAGACACAGTaGAACCACATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: SSCHISPHHHIPFQCEKPEFKTQ*NHISTK
Trigger: TTTAGTAGAGATGTGGTTTCACTGTGTCTTGAACTC...TGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR GCA 90 bp CTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTCTTCAGCATAGGCTTCTaGAATTTCCCCTTTCATCCC +
Preference number: 4 (lower is better)
Translates to: LVWFLDRTLAVCRVSKMFFSIGF*NFPFHP
Trigger: GGGATGAAAGGGGAAATTGCAGAAGCCTATGCTGAA...GAACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp GTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAATATAGCCCAGCATCCTaGACAGTGTTGTCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: VFPCLVFRQNTSSLQSVKYSPAS*TVLSSL
Trigger: CAAGCTAGACAACACTGTCCAGGATGCTGGGCTATA...TTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp TGGGTTACTGTGAGCAGACTACTTGGGGTGACTAGTATTGGCATCAGAACCAGAAACCTTAGCACATTCTaGGCAAACCAAAGTAGATTT +
Preference number: 4 (lower is better)
Translates to: WVTVSRLLGVTSIGIRTRNLSTF*ANQSRF
Trigger: AAATCTACTTTGGTTTGCCCAGAATGTGCTAAGGTT...TCTGGTTCTGATGCCAATACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp TTACTTGAGGTTTGGGTTACTGTGAGCAGACTACTTGGGGTGACTAGTATTGGCAGTTTACTTGAGGTTTaGGTTACTGTGAGCAGACTA +
Preference number: 4 (lower is better)
Translates to: LLEVWVTVSRLLGVTSIGSLLEV*VTVSRL
Trigger: TAGTCTGCTCACAGTAACCCAAACCTCAAGTAAACT...GCCAATACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCAAACCTCAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CCA 90 bp ACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTAGAAATGGGCTTCAGTaGGTAACTTTCAGAAAATTA +
Preference number: 4 (lower is better)
Translates to: TQRLCSSPFFGIHQTYSIRNGLQ*VTFRKL
Trigger: TAATTTTCTGAAAGTTACCCACTGAAGCCCATTTCT...AATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CCA 90 bp GTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCCCCATCGTTCTAGAAAGCATCTaGGTAACACCAAAATGTATT +
Preference number: 4 (lower is better)
Translates to: VPLHSSGSIRHTPLSTPIVLESI*VTPKCI
Trigger: AATACATTTTGGTGTTACCCAGATGCTTTCTAGAAC...GATGGGGGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CCA 90 bp TCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAAGTCCACAAATTAACTaGTCTTCCTGTCACATCAGT +
Preference number: 4 (lower is better)
Translates to: SCHISPHHHIPFQCEKPQSPQIN*SSCHIS
Trigger: ACTGATGTGACAGGAAGACCAGTTAATTTGTGGACT...TTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR GCA 90 bp CTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTCACTGCTCGTAGGTGTTaGTCATGTATTTGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LVWFLDRTLAVCRVSKMFTARRC*SCICSR
Trigger: TCTGGAACAAATACATGAGCAACACCTACGAGCAGT...GAACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR GCA 90 bp TTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGCGGTTCAGATCTTCATaGAATCCATCTAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: FLVWFLDRTLAVCRVSKMRFRSS*NPSRRK
Trigger: CTTTCTTCTAGATGGATTGCATGAAGATCTGAACCG...CATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR GCA 90 bp CCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTGTGATTATACACATCTaGGACCACCATATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PCLVFRQNTSSLQSVKDVVIIHI*DHHIFC
Trigger: GCAGAAAATATGGTGGTCGCAGATGTGTATAATCAC...AACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp GGGTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAGGGTATTTCCTTGTCTaGTTTTTAGACAGAACACTA +
Preference number: 4 (lower is better)
Translates to: GYFLVWFLDRTLAVCRVSGYFLV*FLDRTL
Trigger: TAGTGTTCTGTCTAAAAACCAGACAAGGAAATACCC...TGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp CTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTCTTGTATATGAGAGGATaGTGGCTCCTGACAATTATA +
Preference number: 4 (lower is better)
Translates to: LVWFLDRTLAVCRVSKMFLYMRG*WLLTII
Trigger: TATAATTGTCAGGAGCCACCATCCTCTCATATACAA...GAACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CCA 90 bp TTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGGGGTATTTCCTTGTCTaGTTTTTAGACAGAACACTA +
Preference number: 4 (lower is better)
Translates to: FLVWFLDRTLAVCRVSKMGYFLV*FLDRTL
Trigger: TAGTGTTCTGTCTAAAAACCAGACAAGGAAATACCC...CATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS GCA 90 bp ACCCCTGCAATTCCGCTTTCAGCTGGAGGCCTTAGGCGAGTCAGCTaGCCAAACGTGGGATCGGGGCTCCTGCTCCAGCGGCCCTACAGG +
Preference number: 5 (lower is better)
Translates to: TPAIPLSAGGLRRVS*PNVGSGLLLQRPYR
Trigger: CCTGTAGGGCCGCTGGAGCAGGAGCCCCGATCCCACGTTTGGGCAGCTGACTCGCCTAAGGCCTCCAGCTGAAAGCGGAATTGCAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491791.1
CDS TCA 90 bp CCGCGTTGGAGTGTGGTCCTCATTAAGGGTCCAAGCTCGGACTTCTaGGTCTCCGCATCCGGTCGCTCACGGCAGCCTCCACCTTCCGCC +
Preference number: 5 (lower is better)
Translates to: PRWSVVLIKGPSSDF*VSASGRSRQPPPSA
Trigger: GGCGGAAGGTGGAGGCTGCCGTGAGCGACCGGATGCGGAGACTCAGAAGTCCGAGCTTGGACCCTTAATGAGGACCACACTCCAACGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000415188.1
ENST00000416417.5
ENST00000464168.5
ENST00000486549.5
CDS GCA 90 bp GAGGCCTTAGGCGAGTCAGCTGCCCAAACGTGGGATCGGGGCTCCTaGTCCAGCGGCCCTACAGGGATTTCGGGAAGTACCATGTGCACC +
Preference number: 5 (lower is better)
Translates to: EALGESAAQTWDRGS*SSGPTGISGSTMCT
Trigger: GGTGCACATGGTACTTCCCGAAATCCCTGTAGGGCCGCTGGAGCAGGAGCCCCGATCCCACGTTTGGGCAGCTGACTCGCCTAAGGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491791.1
CDS CCA 90 bp TTCCGCTTTCAGCTGGAGGCCTTAGGCGAGTCAGCTGCCCAAACGTaGGATCGGGGCTCCTGCTCCAGCGGCCCTACAGGGATTTCGGGA +
Preference number: 5 (lower is better)
Translates to: FRFQLEALGESAAQT*DRGSCSSGPTGISG
Trigger: TCCCGAAATCCCTGTAGGGCCGCTGGAGCAGGAGCCCCGATCCCACGTTTGGGCAGCTGACTCGCCTAAGGCCTCCAGCTGAAAGCGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491791.1
CDS-3UTR CAA 90 bp CGAGTCGGCAGCCACGTCCTTGTCCTCACCCGCAGCGCAGTGACGCCGACCCATGCGCAGTGCTTGATTTaGACTGCAAGGTCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: RVGSHVLVLTRSAVTPTHAQCLI*TARSAW
Trigger: CCAGGCAGACCTTGCAGTCAAAATCAAGCACTGCGC...ATGGGTCGGCGTCACTGCGCTGCGGGTGAGGACAAGGACGTGGCTGCCGACTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CAA 90 bp CGAGTCGGCAGCCACGTCCTTGTCCTCACCCGCAGCGCAGTGACGCCGACCCATGCCTTTGATCTTCTTTaGGGTGGTCTCACTGGGGTC +
Preference number: 5 (lower is better)
Translates to: RVGSHVLVLTRSAVTPTHAFDLL*GGLTGV
Trigger: GACCCCAGTGAGACCACCCAAAAGAAGATCAAAGGC...ATGGGTCGGCGTCACTGCGCTGCGGGTGAGGACAAGGACGTGGCTGCCGACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CAA 90 bp GCCCTGCTGAGAGCTGCTTGGTCGTGTCCCTCCATCAGAGGAACCAGAACTGCTCTGTTCCTGGAGCCATaGCAGGCCCCTGGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: ALLRAAWSCPSIRGTRTALFLEP*QAPGSK
Trigger: CTTGGAGCCAGGGGCCTGCAATGGCTCCAGGAACAG...AGCAGTTCTGGTTCCTCTGATGGAGGGACACGACCAAGCAGCTCTCAGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR CAA 90 bp GTCTCCAGGCTGCTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCTGTTCCTGGAGCCATaGCAGGCCCCTGGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: VSRLLHTQRLCSSPFFGILFLEP*QAPGSK
Trigger: CTTGGAGCCAGGGGCCTGCAATGGCTCCAGGAACAG...GATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAGCAGCCTGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp AACTGCTGGGTTCCACAGGAGGTTGAGGGGCCAGGATCCCCAACACTAGATATCCGGTTCCTTAAGGCCTaGCCCACACGCAGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: NCWVPQEVEGPGSPTLDIRFLKA*PTRSGW
Trigger: CCAGCCGCTGCGTGTGGGCAAGGCCTTAAGGAACCG...GATATCTAGTGTTGGGGATCCTGGCCCCTCAACCTCCTGTGGAACCCAGCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CAA 90 bp GGCGCTACAGGGTGGCAGGATCGTGGAGTCAGCATTAGTTGGTGTCCATGCTGCGGGCAGGGCTGGCCTTaGATCTTCTTTTGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: GATGWQDRGVSISWCPCCGQGWP*IFFWVV
Trigger: GACCACCCAAAAGAAGATCAAAGGCCAGCCCTGCCC...GCAGCATGGACACCAACTAATGCTGACTCCACGATCCTGCCACCCTGTAGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR CAA 90 bp TGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTCAGTCTCCCAGGCTTCCTTaGCCACCACCCGGTTCAGAT +
Preference number: 5 (lower is better)
Translates to: CSPGGLHWRYRVAGSWSQSPRLP*PPPGSD
Trigger: ATCTGAACCGGGTGGTGGCAAAGGAAGCCTGGGAGA...CTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS TCA 90 bp TGGGACAGTACCAGGGGTCATGCTCCCCAAGGGTCTCCATGGTGGTaGAGAGCTCGATGCAGTCTCTCAGGGCCACTGTGGTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: WDSTRGHAPQGSPWW*RARCSLSGPLWSSS
Trigger: AGAAGAAGACCACAGTGGCCCTGAGAGACTGCATCGAGCTCTTCACCACCATGGAGACCCTTGGGGAGCATGACCCCTGGTACTGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
ENST00000485450.5
CDS-3UTR CAA 90 bp AGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGGCATCTGGCCGCCCATaGGCATCCTTCAGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: RVSKMFSWGITLALQGGRASGRP*ASFSSK
Trigger: CTTGGAGCTGAAGGATGCCAATGGGCGGCCAGATGC...CCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp CTGCAGGTGGGGTGGGTCTCCAGGCTGCTCCATACTCAGCGCCTGTGTTCCTCTTACTTCTTCCACTGCTaGAACCACCGGCTGTCAATA +
Preference number: 5 (lower is better)
Translates to: LQVGWVSRLLHTQRLCSSYFFHC*NHRLSI
Trigger: TATTGACAGCCGGTGGTTCAAGCAGTGGAAGAAGTA...AGAGGAACACAGGCGCTGAGTATGGAGCAGCCTGGAGACCCACCCCACCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp GGGGTGGGTCTCCAGGCTGCTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTTTTTCTGACGATGGGTaGCTGGCCTTCTACACAGCC +
Preference number: 5 (lower is better)
Translates to: GVGLQAAPYSAPVFLSILFSDDG*LAFYTA
Trigger: GGCTGTGTAGAAGGCCAGCAACCCATCGTCAGAAAA...AAGAATGGAGAGGAACACAGGCGCTGAGTATGGAGCAGCCTGGAGACCCACCCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp GGTGGGTCTCCAGGCTGCTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGCATCCTGGACAGTGTaGTCTAGCTTGCTCAACTGC +
Preference number: 5 (lower is better)
Translates to: GGSPGCSILSACVPLHSSASWTV*SSLLNC
Trigger: GCAGTTGAGCAAGCTAGACAACACTGTCCAGGATGC...CGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAGCAGCCTGGAGACCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp AGCCCTGCTGAGAGCTGCTTGGTCGTGTCCCTCCATCAGAGGAACCAGAACTGCTCCACAGAGCCCAGGTaGTATATGAGAGGATGGTGG +
Preference number: 5 (lower is better)
Translates to: SPAESCLVVSLHQRNQNCSTEPR*YMRGWW
Trigger: CCACCATCCTCTCATATACAACCTGGGCTCTGTGGA...GCAGTTCTGGTTCCTCTGATGGAGGGACACGACCAAGCAGCTCTCAGCAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR CAA 90 bp AGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGGGGCAGGGCTGGCCTTaGATCTTCTTTTGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: RVSKMFSWGITLALQGGRGQGWP*IFFWVV
Trigger: GACCACCCAAAAGAAGATCAAAGGCCAGCCCTGCCC...CCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CAA 90 bp AAGCCTCATCATCCCCAAAGCCCTGCTGAGAGCTGCTTGGTCGTGTCCCTCCATTGGACCACCAGGATCTaGGGCAAGGACCATAGGTCA +
Preference number: 5 (lower is better)
Translates to: KPHHPQSPAESCLVVSLHWTTRI*GKDHRS
Trigger: TGACCTATGGTCCTTGCCCAAGATCCTGGTGGTCCA...ATGGAGGGACACGACCAAGCAGCTCTCAGCAGGGCTTTGGGGATGATGAGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR CAA 90 bp TGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGTCAGATCAGACATACTCCATaGAGTACCCCCATCCCACCC +
Preference number: 5 (lower is better)
Translates to: CSPGGLHWRYRVAGSWSQIRHTP*STPIPP
Trigger: GGGTGGGATGGGGGTACTCAATGGAGTATGTCTGAT...CTGACTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS CCA 90 bp TTTCAAGGTCTGACTCTCAGGATCACTGCGCCCCGCGTTGGAGTGTaGTCCTCATTAAGGGTCCAAGCTCGGACTTCTGAGTCTCCGCAT +
Preference number: 5 (lower is better)
Translates to: FQGLTLRITAPRVGV*SSLRVQARTSESPH
Trigger: ATGCGGAGACTCAGAAGTCCGAGCTTGGACCCTTAATGAGGACCACACTCCAACGCGGGGCGCAGTGATCCTGAGAGTCAGACCTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464168.5
ENST00000486549.5
CDS-3UTR CAA 90 bp CTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACGCATCTGGCCGCCCATaGGCATCCTTCAGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: LHTQRLCSSPFFGIHQTYASGRP*ASFSSK
Trigger: CTTGGAGCTGAAGGATGCCAATGGGCGGCCAGATGC...GTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp AGCCCTGCTGAGAGCTGCTTGGTCGTGTCCCTCCATCAGAGGAACCAGAACTGCGACTCAAGGGTTAACTaGTGCTTGGGGACAGAAAGC +
Preference number: 5 (lower is better)
Translates to: SPAESCLVVSLHQRNQNCDSRVN*CLGTES
Trigger: GCTTTCTGTCCCCAAGCACAAGTTAACCCTTGAGTC...GCAGTTCTGGTTCCTCTGATGGAGGGACACGACCAAGCAGCTCTCAGCAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR CAA 90 bp GTCTGCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGGCAGGGCTGGCCTTaGATCTTCTTTTGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: VCRVSKMFSWGITLALQGGQGWP*IFFWVV
Trigger: GACCACCCAAAAGAAGATCAAAGGCCAGCCCTGCCC...ACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGCAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CAA 90 bp AACTGCTGGGTTCCACAGGAGGTTGAGGGGCCAGGATCCCCAACACTAGATATCTGGACCACCAGGATCTaGGGCAAGGACCATAGGTCA +
Preference number: 5 (lower is better)
Translates to: NCWVPQEVEGPGSPTLDIWTTRI*GKDHRS
Trigger: TGACCTATGGTCCTTGCCCAAGATCCTGGTGGTCCA...GATATCTAGTGTTGGGGATCCTGGCCCCTCAACCTCCTGTGGAACCCAGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CAA 90 bp GAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATGGACCACCAGGATCTaGGGCAAGGACCATAGGTCA +
Preference number: 5 (lower is better)
Translates to: ECQRCSPGGLHWRYRVAGWTTRI*GKDHRS
Trigger: TGACCTATGGTCCTTGCCCAAGATCCTGGTGGTCCA...TCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CAA 90 bp CGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACGGGTTCCACAGGAGGTaGAGGGGCCAGGATCCCCAA +
Preference number: 5 (lower is better)
Translates to: RLCSSPFFGIHQTYSIEYGFHRR*RGQDPQ
Trigger: TTGGGGATCCTGGCCCCTCAACCTCCTGTGGAACCC...GTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CAA 90 bp TGCTGGGTTCCACAGGAGGTTGAGGGGCCAGGATCCCCAACACTAGATATCTTCTGGCAACTCAGCACATaGGTGGGGTCACTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: CWVPQEVEGPGSPTLDIFWQLST*VGSLFS
Trigger: TGAGAACAGTGACCCCACCAATGTGCTGAGTTGCCA...GAAGATATCTAGTGTTGGGGATCCTGGCCCCTCAACCTCCTGTGGAACCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CAA 90 bp GAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCCACAGAGCCCAGGTaGTATATGAGAGGATGGTGG +
Preference number: 5 (lower is better)
Translates to: ECQRCSPGGLHWRYRVAGSTEPR*YMRGWW
Trigger: CCACCATCCTCTCATATACAACCTGGGCTCTGTGGA...TCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CAA 90 bp GGGCTTTCGAATGGGGGCCCCGGGAAGAGTCTTGGCAGGGATGAGGAAAGAACCAGGGTTAACTTGTGCTaGGGGACAGAAAGCAATAGT +
Preference number: 5 (lower is better)
Translates to: GLSNGGPGKSLGRDEERTRVNLC*GTESNS
Trigger: ACTATTGCTTTCTGTCCCCAAGCACAAGTTAACCCT...GGTTCTTTCCTCATCCCTGCCAAGACTCTTCCCGGGGCCCCCATTCGAAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CAA 90 bp GAGGTTTGGGTTACTGTGAGCAGACTACTTGGGGTGACTAGTATTGGCATCAGACTGTTCCTGGAGCCATaGCAGGCCCCTGGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: EVWVTVSRLLGVTSIGIRLFLEP*QAPGSK
Trigger: CTTGGAGCCAGGGGCCTGCAATGGCTCCAGGAACAG...TCTGATGCCAATACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCAAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp GTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGCCTTTGATCTTCTTTaGGGTGGTCTCACTGGGGTC +
Preference number: 5 (lower is better)
Translates to: VSKMFSWGITLALQGGRIAFDLL*GGLTGV
Trigger: GACCCCAGTGAGACCACCCAAAAGAAGATCAAAGGC...GATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS GCA 90 bp GACTCAAGGGTTAACTTGTGCTTGGGGACAGAAAGCAATAGTGGCTaGCCATATAGCGCTGATGCGGAGGAAGTGCTTGATGGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: DSRVNLCLGTESNSG*PYSADAEEVLDGLD
Trigger: GTCCAGGCCATCAAGCACTTCCTCCGCATCAGCGCTATATGGGCAGCCACTATTGCTTTCTGTCCCCAAGCACAAGTTAACCCTTGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
ENST00000485450.5
CDS-3UTR CAA 90 bp GTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGTTTTCTGACGATGGGTaGCTGGCCTTCTACACAGCC +
Preference number: 5 (lower is better)
Translates to: VHTTTYPFSVKNHKADQAFSDDG*LAFYTA
Trigger: GGCTGTGTAGAAGGCCAGCAACCCATCGTCAGAAAA...CGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CAA 90 bp GTCTGCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTTCGACTTTGCAGTGCTaGACAAACAGGCCATGCTCC +
Preference number: 5 (lower is better)
Translates to: VCRVSKMFSWGITLALQGSTLQC*TNRPCS
Trigger: GGAGCATGGCCTGTTTGTCAAGCACTGCAAAGTCGA...ACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp GTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGTGGCAACTCAGCACATaGGTGGGGTCACTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: VHTTTYPFSVKNHKADQAWQLST*VGSLFS
Trigger: TGAGAACAGTGACCCCACCAATGTGCTGAGTTGCCA...CGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CAA 90 bp GTCTGCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTTCCACAGAGCCCAGGTaGTATATGAGAGGATGGTGG +
Preference number: 5 (lower is better)
Translates to: VCRVSKMFSWGITLALQGSTEPR*YMRGWW
Trigger: CCACCATCCTCTCATATACAACCTGGGCTCTGTGGA...ACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CAA 90 bp GGCGCTACAGGGTGGCAGGATCGTGGAGTCAGCATTAGTTGGTGTCCATGCTGCAGAGGGTTGTCTCTGTaGATTTCGGCTTCATACTCA +
Preference number: 5 (lower is better)
Translates to: GATGWQDRGVSISWCPCCRGLSL*ISASYS
Trigger: TGAGTATGAAGCCGAAATCAACAGAGACAACCCTCT...GCAGCATGGACACCAACTAATGCTGACTCCACGATCCTGCCACCCTGTAGCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR CAA 90 bp GAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGAGACTCAAGGGTTAACTaGTGCTTGGGGACAGAAAGC +
Preference number: 5 (lower is better)
Translates to: ECQRCSPGGLHWRYRVAGDSRVN*CLGTES
Trigger: GCTTTCTGTCCCCAAGCACAAGTTAACCCTTGAGTC...TCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CAA 90 bp CCCGGGAAGAGTCTTGGCAGGGATGAGGAAAGAACCCGTTCTAGAAAGCATCTGATCAGACATACTCCATaGAGTACCCCCATCCCACCC +
Preference number: 5 (lower is better)
Translates to: PGKSLGRDEERTRSRKHLIRHTP*STPIPP
Trigger: GGGTGGGATGGGGGTACTCAATGGAGTATGTCTGAT...CAGATGCTTTCTAGAACGGGTTCTTTCCTCATCCCTGCCAAGACTCTTCCCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CAA 90 bp TCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGGGCAGAAGCATCACTaGAACCCGGGAGTAAGCCGA +
Preference number: 5 (lower is better)
Translates to: SVHTTTYPFSVKNHKADQGQKHH*NPGVSR
Trigger: TCGGCTTACTCCCGGGTTCAAGTGATGCTTCTGCCC...CTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CAA 90 bp AAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGAGGAAAATAGCCCAGAGTaGTCTATTGGGCCAGGAAAT +
Preference number: 5 (lower is better)
Translates to: KMFSWGITLALQGGRIVEENSPE*SIGPGN
Trigger: ATTTCCTGGCCCAATAGACAACTCTGGGCTATTTTC...CTCCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp CATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCTTTTCTGACGATGGGTaGCTGGCCTTCTACACAGCC +
Preference number: 5 (lower is better)
Translates to: HTQRLCSSPFFGIHQTYSFSDDG*LAFYTA
Trigger: GGCTGTGTAGAAGGCCAGCAACCCATCGTCAGAAAA...GGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp TCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCCCCATCCCACCTCGACTTTGCAGTGCTaGACAAACAGGCCATGCTCC +
Preference number: 5 (lower is better)
Translates to: SPFFGIHQTYSIEYPHPTSTLQC*TNRPCS
Trigger: GGAGCATGGCCTGTTTGTCAAGCACTGCAAAGTCGA...GGTGGGATGGGGGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp GGAAGAGTCTTGGCAGGGATGAGGAAAGAACCCGTTCTAGAAAGCATCTGGGTACGCTCCGCAGGGATGTaGAATAGCTTCCGCATCTCT +
Preference number: 5 (lower is better)
Translates to: GRVLAGMRKEPVLESIWVRSAGM*NSFRIS
Trigger: AGAGATGCGGAAGCTATTCAACATCCCTGCGGAGCG...TACCCAGATGCTTTCTAGAACGGGTTCTTTCCTCATCCCTGCCAAGACTCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CAA 90 bp GTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCCCCATCCGCTCCGCAGGGATGTaGAATAGCTTCCGCATCTCT +
Preference number: 5 (lower is better)
Translates to: VPLHSSGSIRHTPLSTPIRSAGM*NSFRIS
Trigger: AGAGATGCGGAAGCTATTCAACATCCCTGCGGAGCG...GATGGGGGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp TCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGCGCTCCGCAGGGATGTaGAATAGCTTCCGCATCTCT +
Preference number: 5 (lower is better)
Translates to: SVHTTTYPFSVKNHKADQRSAGM*NSFRIS
Trigger: AGAGATGCGGAAGCTATTCAACATCCCTGCGGAGCG...CTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CAA 90 bp GTCTCCAGGCTGCTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCGTGTTGCTCATGTATTaGTTCCAGAGCCGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: VSRLLHTQRLCSSPFFGIVLLMY*FQSRVS
Trigger: TGAAACACGGCTCTGGAACAAATACATGAGCAACAC...GATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAGCAGCCTGGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp AGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATGACTCAAGGGTTAACTaGTGCTTGGGGACAGAAAGC +
Preference number: 5 (lower is better)
Translates to: SVKDVLLGDYTGATGWQDDSRVN*CLGTES
Trigger: GCTTTCTGTCCCCAAGCACAAGTTAACCCTTGAGTC...ATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CAA 90 bp CTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGGCCTTTGATCTTCTTTaGGGTGGTCTCACTGGGGTC +
Preference number: 5 (lower is better)
Translates to: LSACVPLHSSGSIRHTPLAFDLL*GGLTGV
Trigger: GACCCCAGTGAGACCACCCAAAAGAAGATCAAAGGC...CAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp GCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCACGTACACATAAGGCCTaGCTGACAGGTTACAGACAA +
Preference number: 5 (lower is better)
Translates to: AECQRCSPGGLHWRYRVARTHKA*LTGYRQ
Trigger: TTGTCTGTAACCTGTCAGCAAGGCCTTATGTGTACG...TGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS CCA 90 bp CGCATCTCTTTCTCGATGGTTGCAATGGTGTCTGCCTTGCTGAAATaGCAACTCAGCACATTGGTGGGGTCACTGTTCTCACAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: RISFSMVAMVSALLK*QLSTLVGSLFSQSF
Trigger: GAAGCTCTGTGAGAACAGTGACCCCACCAATGTGCTGAGTTGCCATTTCAGCAAGGCAGACACCATTGCAACCATCGAGAAAGAGATGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000415188.1
ENST00000416417.5
ENST00000464168.5
ENST00000491791.1
CDS CCA 90 bp GTAGGCAAAGGTGGCTTTCTTAACTTCAGGGACACCAATCTCTTCTaGCTCTGGGCTGGCAACCTTAAAGGGCCTTATAGACCTCAGGCA +
Preference number: 5 (lower is better)
Translates to: VGKGGFLNFRDTNLF*LWAGNLKGPYRPQA
Trigger: TGCCTGAGGTCTATAAGGCCCTTTAAGGTTGCCAGCCCAGAGCCAGAAGAGATTGGTGTCCCTGAAGTTAAGAAAGCCACCTTTGCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462673.1
ENST00000488520.5
CDS CCA 90 bp TTCGGGAAGTACCATGTGCACCAGCGCCTTGGGACCAAGACTCAATaGTGTGTTGTAGTCATTAACAGTCGCCTTAAACAGTCGACGCCA +
Preference number: 5 (lower is better)
Translates to: FGKYHVHQRLGTKTQ*CVVVINSRLKQSTP
Trigger: TGGCGTCGACTGTTTAAGGCGACTGTTAATGACTACAACACACCATTGAGTCTTGGTCCCAAGGCGCTGGTGCACATGGTACTTCCCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491791.1
CDS-3UTR CAA 90 bp AGGCTGGCGGATCATGAGGTCACGATCACAAGGTCAGGAATTCAAGACCAGCCTTACTTCTTCCACTGCTaGAACCACCGGCTGTCAATA +
Preference number: 5 (lower is better)
Translates to: RLADHEVTITRSGIQDQPYFFHC*NHRLSI
Trigger: TATTGACAGCCGGTGGTTCAAGCAGTGGAAGAAGTA...AGGCTGGTCTTGAATTCCTGACCTTGTGATCGTGACCTCATGATCCGCCAGCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CAA 90 bp GTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGGCCCAGAGTTGTCTATaGGGCCAGGAAATAGGTTAT +
Preference number: 5 (lower is better)
Translates to: VHTTTYPFSVKNHKADQAAQSCL*GQEIGY
Trigger: ATAACCTATTTCCTGGCCCAATAGACAACTCTGGGC...CGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CAA 90 bp TCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGTCGACTTTGCAGTGCTaGACAAACAGGCCATGCTCC +
Preference number: 5 (lower is better)
Translates to: SVHTTTYPFSVKNHKADQSTLQC*TNRPCS
Trigger: GGAGCATGGCCTGTTTGTCAAGCACTGCAAAGTCGA...CTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CAA 90 bp TCTGCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGCTGAGGAATAGGGACTaGCTGATGATTTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SAECQRCSPGGLHWRYRVLRNRD*LMILER
Trigger: CCTCTCCAAAATCATCAGCAAGTCCCTATTCCTCAG...CACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CAA 90 bp AACTGCTGGGTTCCACAGGAGGTTGAGGGGCCAGGATCCCCAACACTAGATATCAGCAAAACGTCCTACTaGAGTTTTGAACATGCGAGG +
Preference number: 5 (lower is better)
Translates to: NCWVPQEVEGPGSPTLDISKTSY*SFEHAR
Trigger: CCTCGCATGTTCAAAACTCAAGTAGGACGTTTTGCT...GATATCTAGTGTTGGGGATCCTGGCCCCTCAACCTCCTGTGGAACCCAGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS TCA 90 bp CTGTGTCGAGCTTATCCCTCCAGTATCTGTTGTAGGAGAAACGTTTaGGGTGGACCACCAGGATCTTGGGCAAGGACCATAGGTCAAACT +
Preference number: 5 (lower is better)
Translates to: LCRAYPSSICCRRNV*GGPPGSWARTIGQT
Trigger: AGTTTGACCTATGGTCCTTGCCCAAGATCCTGGTGGTCCACCTCAAACGTTTCTCCTACAACAGATACTGGAGGGATAAGCTCGACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
ENST00000485450.5
CDS GCA 90 bp CAGAAAAGCCAGATCCATTTGACTGCAAGGTCTGCCTGGGCCATGTaGCATCTTCATTTTGAGGCTCAATTACTAGCACCTGACCCTGGT +
Preference number: 5 (lower is better)
Translates to: QKSQIHLTARSAWAM*HLHFEAQLLAPDPG
Trigger: ACCAGGGTCAGGTGCTAGTAATTGAGCCTCAAAATGAAGATGGCACATGGCCCAGGCAGACCTTGCAGTCAAATGGATCTGGCTTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351842.8
CDS CCA 90 bp CAGGTTTCCAAGTCCACAGAGCCCAGGTTGTATATGAGAGGATGGTaGCTCCTGACAATTATACGAAGCAGAAAAGCCAGATCCACCCCT +
Preference number: 5 (lower is better)
Translates to: QVSKSTEPRLYMRGW*LLTIIRSRKARSTP
Trigger: AGGGGTGGATCTGGCTTTTCTGCTTCGTATAATTGTCAGGAGCCACCATCCTCTCATATACAACCTGGGCTCTGTGGACTTGGAAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265560.9
ENST00000431357.1
ENST00000461553.1
ENST00000485450.5
ENST00000488520.5
CDS CCA 90 bp TCCCAGGTTTCCAAGTCCACAGAGCCCAGGTTGTATATGAGAGGATaGTGGCTCCTGACAATTATACGAAGCAGAAAAGCCAGATCCACC +
Preference number: 5 (lower is better)
Translates to: SQVSKSTEPRLYMRG*WLLTIIRSRKARST
Trigger: GGTGGATCTGGCTTTTCTGCTTCGTATAATTGTCAGGAGCCACCATCCTCTCATATACAACCTGGGCTCTGTGGACTTGGAAACCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265560.9
ENST00000431357.1
ENST00000461553.1
ENST00000485450.5
ENST00000488520.5
CDS CCA 90 bp AAAGGTGGCTTTCTTAACTTCAGGGACACCAATCTCTTCTGGCTCTaGGCTGGCAACCTTAAAGGGCCTTATAGACCTCAGGCAAGTGAC +
Preference number: 5 (lower is better)
Translates to: KGGFLNFRDTNLFWL*AGNLKGPYRPQASD
Trigger: GTCACTTGCCTGAGGTCTATAAGGCCCTTTAAGGTTGCCAGCCCAGAGCCAGAAGAGATTGGTGTCCCTGAAGTTAAGAAAGCCACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462673.1
ENST00000488520.5
CDS-3UTR CAA 90 bp GTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGGCTGACCAGGCGGAAAATAGCCCAGAGTaGTCTATTGGGCCAGGAAAT +
Preference number: 5 (lower is better)
Translates to: VHTTTYPFSVKNHKADQAENSPE*SIGPGN
Trigger: ATTTCCTGGCCCAATAGACAACTCTGGGCTATTTTC...CGCCTGGTCAGCCTTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CAA 90 bp GGTCTTCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACGCATCCTGGACAGTGTaGTCTAGCTTGCTCAACTGC +
Preference number: 5 (lower is better)
Translates to: GLPVTSVHTTTYPFSVKNASWTV*SSLLNC
Trigger: GCAGTTGAGCAAGCTAGACAACACTGTCCAGGATGC...GTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGAAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CAA 90 bp AGTGCACATAGCGAGGGAAAGGGGAGTTTACTTGAGGTTTGGGTTACTGTGAGCTTCATCCCCAGAGGGTaGTCTCTGTTGATTTCGGCT +
Preference number: 5 (lower is better)
Translates to: SAHSEGKGSLLEVWVTVSFIPRG*SLLISA
Trigger: AGCCGAAATCAACAGAGACAACCCTCTGGGGATGAA...GCTCACAGTAACCCAAACCTCAAGTAAACTCCCCTTTCCCTCGCTATGTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CAA 90 bp AGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATAGCAAAACGTCCTACTaGAGTTTTGAACATGCGAGG +
Preference number: 5 (lower is better)
Translates to: SVKDVLLGDYTGATGWQDSKTSY*SFEHAR
Trigger: CCTCGCATGTTCAAAACTCAAGTAGGACGTTTTGCT...ATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CAA 90 bp CAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATCGTGGCAAACCAAAGTAGATTaGAAGAGGCCATGGAAAGTA +
Preference number: 5 (lower is better)
Translates to: QRCSPGGLHWRYRVAGSWQTKVD*KRPWKV
Trigger: TACTTTCCATGGCCTCTTCAAATCTACTTTGGTTTG...CCACGATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CAA 90 bp AACTCCCACAAAGATTTCTGTTCTCAAGCCAACATGGAAACAACTAGACGGGACGCCCCGGGAAGAGTCTaGGCAGGGATGAGGAAAGAA +
Preference number: 5 (lower is better)
Translates to: NSHKDFCSQANMETTRRDAPGRV*AGMRKE
Trigger: TTCTTTCCTCATCCCTGCCAAGACTCTTCCCGGGGC...GTCCCGTCTAGTTGTTTCCATGTTGGCTTGAGAACAGAAATCTTTGTGGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS-3UTR CAA 90 bp GTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCCCCATCAAAAGCCAGATCCATTaGACTGCAAGGTCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: VPLHSSGSIRHTPLSTPIKSQIH*TARSAW
Trigger: CCAGGCAGACCTTGCAGTCAAATGGATCTGGCTTTT...GATGGGGGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351842.8
CDS-3UTR CAA 90 bp AGGCTGGCGGATCATGAGGTCACGATCACAAGGTCAGGAATTCAAGACCAGCCTAAAAGAACGAAACTTTaGACTGCAAGGTCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: RLADHEVTITRSGIQDQPKRTKL*TARSAW
Trigger: CCAGGCAGACCTTGCAGTCAAAAGTTTCGTTCTTTT...AGGCTGGTCTTGAATTCCTGACCTTGTGATCGTGACCTCATGATCCGCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS TCA 90 bp TCATGTATTTGTTCCAGAGCCGTGTTTCACGCTCCGCAGGGATGTTaGATAGCTTCCGCATCTCTTTCTCGATGGTTGCAATGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: SCICSRAVFHAPQGC*IASASLSRWLQWCL
Trigger: CAGACACCATTGCAACCATCGAGAAAGAGATGCGGAAGCTATTCAACATCCCTGCGGAGCGTGAAACACGGCTCTGGAACAAATACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000415188.1
ENST00000416417.5
ENST00000464168.5
ENST00000491791.1
CDS-3UTR CAA 90 bp CATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCTTATGTTCACCCACATaGTACATGTCCCAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: HTQRLCSSPFFGIHQTYSLCSPT*YMSQLS
Trigger: TGACAGCTGGGACATGTACAATGTGGGTGAACATAA...GGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp CGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACGCCCAGAGTTGTCTATaGGGCCAGGAAATAGGTTAT +
Preference number: 5 (lower is better)
Translates to: RLCSSPFFGIHQTYSIEYAQSCL*GQEIGY
Trigger: ATAACCTATTTCCTGGCCCAATAGACAACTCTGGGC...GTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp CTACAGGGTGGCAGGATCGTGGAGTCAGCATTAGTTGGTGTCCATGCTGCAAGCCAAACCAAAGTAGATTaGAAGAGGCCATGGAAAGTA +
Preference number: 5 (lower is better)
Translates to: LQGGRIVESALVGVHAASQTKVD*KRPWKV
Trigger: TACTTTCCATGGCCTCTTCAAATCTACTTTGGTTTG...GCTTGCAGCATGGACACCAACTAATGCTGACTCCACGATCCTGCCACCCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431357.1
CDS-3UTR CAA 90 bp CGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCGTACACATAAGGCCTaGCTGACAGGTTACAGACAA +
Preference number: 5 (lower is better)
Translates to: RLCSSPFFGIHQTYSIEYRTHKA*LTGYRQ
Trigger: TTGTCTGTAACCTGTCAGCAAGGCCTTATGTGTACG...GTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp GCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAGTACCCGTACACATAAGGCCTaGCTGACAGGTTACAGACAA +
Preference number: 5 (lower is better)
Translates to: ACVPLHSSGSIRHTPLSTRTHKA*LTGYRQ
Trigger: TTGTCTGTAACCTGTCAGCAAGGCCTTATGTGTACG...GGTACTCAATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp AACTGCTGGGTTCCACAGGAGGTTGAGGGGCCAGGATCCCCAACACTAGATATCCATTTACCATTCAGTTaGTTCTTCGCATATGCAGTG +
Preference number: 5 (lower is better)
Translates to: NCWVPQEVEGPGSPTLDIHLPFS*FFAYAV
Trigger: CACTGCATATGCGAAGAACAAACTGAATGGTAAATG...GATATCTAGTGTTGGGGATCCTGGCCCCTCAACCTCCTGTGGAACCCAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS TCA 90 bp ATAATGATTGGACACGGCAATGAGGTCGTACACATAAGGCCTTGCTaGCAGGTTACAGACAAACTCGGACATGTTCAGCCCTCTGATTGG +
Preference number: 5 (lower is better)
Translates to: IMIGHGNEVVHIRPC*QVTDKLGHVQPSDW
Trigger: CCAATCAGAGGGCTGAACATGTCCGAGTTTGTCTGTAACCTGTCAGCAAGGCCTTATGTGTACGACCTCATTGCCGTGTCCAATCATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
ENST00000485450.5
CDS TCA 90 bp GCAGTGCTTGATCAAAAGTCAAGCTGTGACTCCACACCAACACTGTaGACACCATCTGTAGGCAAAGGTGGCTTTCTTAACTTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: AVLDQKSSCDSTPTL*TPSVGKGGFLNFRD
Trigger: GTCCCTGAAGTTAAGAAAGCCACCTTTGCCTACAGATGGTGTTCACAGTGTTGGTGTGGAGTCACAGCTTGACTTTTGATCAAGCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488520.5
CDS CCA 90 bp TCCCAGGTTTCCAAGTCCACAGAGCCCAGGTTGTATATGAGAGGATaGTGGCTCCTGACAATTATACGAAGCAGAAAAGCCAGATCCATT +
Preference number: 5 (lower is better)
Translates to: SQVSKSTEPRLYMRG*WLLTIIRSRKARSI
Trigger: AATGGATCTGGCTTTTCTGCTTCGTATAATTGTCAGGAGCCACCATCCTCTCATATACAACCTGGGCTCTGTGGACTTGGAAACCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351842.8
CDS-3UTR CAA 90 bp ACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTTTATGTTCACCCACATaGTACATGTCCCAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: TQRLCSSPFFGIHQTYSILCSPT*YMSQLS
Trigger: TGACAGCTGGGACATGTACAATGTGGGTGAACATAA...AATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp ACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACTCCATTGAAAATAGCCCAGAGTaGTCTATTGGGCCAGGAAAT +
Preference number: 5 (lower is better)
Translates to: TQRLCSSPFFGIHQTYSIENSPE*SIGPGN
Trigger: ATTTCCTGGCCCAATAGACAACTCTGGGCTATTTTC...AATGGAGTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp GAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGAAGTGTAGATCGAGAGTaGAGTTTAAGTAGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: ECQRCSPGGLHWRYRVAGSVDRE*SLSSFP
Trigger: TGGAAAACTACTTAAACTCAACTCTCGATCTACACT...TCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CAA 90 bp TTACTTGAGGTTTGGGTTACTGTGAGCAGACTACTTGGGGTGACTAGTATTGGCGCCCAGAGTTGTCTATaGGGCCAGGAAATAGGTTAT +
Preference number: 5 (lower is better)
Translates to: LLEVWVTVSRLLGVTSIGAQSCL*GQEIGY
Trigger: ATAACCTATTTCCTGGCCCAATAGACAACTCTGGGC...GCCAATACTAGTCACCCCAAGTAGTCTGCTCACAGTAACCCAAACCTCAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp CTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTCTGGCAACTCAGCACATaGGTGGGGTCACTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: LVWFLDRTLAVCRVSKMFWQLST*VGSLFS
Trigger: TGAGAACAGTGACCCCACCAATGTGCTGAGTTGCCA...GAACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp TTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGGCATCCTGGACAGTGTaGTCTAGCTTGCTCAACTGC +
Preference number: 5 (lower is better)
Translates to: FLVWFLDRTLAVCRVSKMASWTV*SSLLNC
Trigger: GCAGTTGAGCAAGCTAGACAACACTGTCCAGGATGC...CATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp CTCCATACTCAGCGCCTGTGTTCCTCTCCATTCTTCGGGATCCATCAGACATACCAAACCAAAGTAGATTaGAAGAGGCCATGGAAAGTA +
Preference number: 5 (lower is better)
Translates to: LHTQRLCSSPFFGIHQTYQTKVD*KRPWKV
Trigger: TACTTTCCATGGCCTCTTCAAATCTACTTTGGTTTG...GTATGTCTGATGGATCCCGAAGAATGGAGAGGAACACAGGCGCTGAGTATGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp TCTGCAGAGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGAGTGTAGATCGAGAGTaGAGTTTAAGTAGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: SAECQRCSPGGLHWRYRVSVDRE*SLSSFP
Trigger: TGGAAAACTACTTAAACTCAACTCTCGATCTACACT...CACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACTCTGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CAA 90 bp AGTGTCAAAGATGTTCTCCTGGGGGATTACACTGGCGCTACAGGGTGGCAGGATAGTGTAGATCGAGAGTaGAGTTTAAGTAGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: SVKDVLLGDYTGATGWQDSVDRE*SLSSFP
Trigger: TGGAAAACTACTTAAACTCAACTCTCGATCTACACT...ATCCTGCCACCCTGTAGCGCCAGTGTAATCCCCCAGGAGAACATCTTTGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CAA 90 bp GGGTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCATACTTCTTCCACTGCTaGAACCACCGGCTGTCAATA +
Preference number: 5 (lower is better)
Translates to: GYFLVWFLDRTLAVCRVSYFFHC*NHRLSI
Trigger: TATTGACAGCCGGTGGTTCAAGCAGTGGAAGAAGTA...TGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp TCCTGTCACATCAGTCCACACCACCACATACCCTTTCAGTGTGAAAAACCACAAGTGTTGCTCATGTATTaGTTCCAGAGCCGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: SCHISPHHHIPFQCEKPQVLLMY*FQSRVS
Trigger: TGAAACACGGCTCTGGAACAAATACATGAGCAACAC...TTGTGGTTTTTCACACTGAAAGGGTATGTGGTGGTGTGGACTGATGTGACAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS-3UTR CAA 90 bp CCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTTTCATCCCCAGAGGGTaGTCTCTGTTGATTTCGGCT +
Preference number: 5 (lower is better)
Translates to: PCLVFRQNTSSLQSVKDVFIPRG*SLLISA
Trigger: AGCCGAAATCAACAGAGACAACCCTCTGGGGATGAA...AACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CAA 90 bp GTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAATTCATCCCCAGAGGGTaGTCTCTGTTGATTTCGGCT +
Preference number: 5 (lower is better)
Translates to: VFPCLVFRQNTSSLQSVKFIPRG*SLLISA
Trigger: AGCCGAAATCAACAGAGACAACCCTCTGGGGATGAA...TTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CAA 90 bp TTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGAGAGGGTTGTCTCTGTaGATTTCGGCTTCATACTCA +
Preference number: 5 (lower is better)
Translates to: FLVWFLDRTLAVCRVSKMRGLSL*ISASYS
Trigger: TGAGTATGAAGCCGAAATCAACAGAGACAACCCTCT...CATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CAA 90 bp TTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGAGCAAAACGTCCTACTaGAGTTTTGAACATGCGAGG +
Preference number: 5 (lower is better)
Translates to: FLVWFLDRTLAVCRVSKMSKTSY*SFEHAR
Trigger: CCTCGCATGTTCAAAACTCAAGTAGGACGTTTTGCT...CATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CAA 90 bp CTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTCAGGGTTAACTTGTGCTaGGGGACAGAAAGCAATAGT +
Preference number: 5 (lower is better)
Translates to: LVWFLDRTLAVCRVSKMFRVNLC*GTESNS
Trigger: ACTATTGCTTTCTGTCCCCAAGCACAAGTTAACCCT...GAACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CAA 90 bp GTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGTGTTGCTCATGTATTaGTTCCAGAGCCGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: VFPCLVFRQNTSSLQSVKVLLMY*FQSRVS
Trigger: TGAAACACGGCTCTGGAACAAATACATGAGCAACAC...TTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS-3UTR CAA 90 bp GTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAAGAGGGTTGTCTCTGTaGATTTCGGCTTCATACTCA +
Preference number: 5 (lower is better)
Translates to: VFPCLVFRQNTSSLQSVKRGLSL*ISASYS
Trigger: TGAGTATGAAGCCGAAATCAACAGAGACAACCCTCT...TTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CAA 90 bp GTATTTCCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAAGGGTTAACTTGTGCTaGGGGACAGAAAGCAATAGT +
Preference number: 5 (lower is better)
Translates to: VFPCLVFRQNTSSLQSVKRVNLC*GTESNS
Trigger: ACTATTGCTTTCTGTCCCCAAGCACAAGTTAACCCT...TTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGGAAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
CDS-3UTR CAA 90 bp CCTTGTCTGGTTTTTAGACAGAACACTAGCAGTCTGCAGAGTGTCAAAGATGTTCATTTACCATTCAGTTaGTTCTTCGCATATGCAGTG +
Preference number: 5 (lower is better)
Translates to: PCLVFRQNTSSLQSVKDVHLPFS*FFAYAV
Trigger: CACTGCATATGCGAAGAACAAACTGAATGGTAAATG...AACATCTTTGACACTCTGCAGACTGCTAGTGTTCTGTCTAAAAACCAGACAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265560.9
ENST00000351842.8
CDS GCA 90 bp GTAATACCATTTACCATTCAGTTTGTTCTTCGCATATGCAGTGTCTaGCAAGTCAACAAAGAAAATACTCTAGCGGTCTCCAGAGAATTA +
Preference number: 5 (lower is better)
Translates to: VIPFTIQFVLRICSV*QVNKENTLAVSREL
Trigger: TAATTCTCTGGAGACCGCTAGAGTATTTTCTTTGTTGACTTGGCAGACACTGCATATGCGAAGAACAAACTGAATGGTAAATGGTATTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483212.1
CDS CCA 72 bp CAGCTGGAGGCCTTAGGCGAGTCAGCTGCCCAAACGTaGGATCGGGGCTCCTGCTCCAGCGGCCCTACAGGG +
Preference number: 6 (lower is better)
Translates to: QLEALGESAAQT*DRGSCSSGPTG
Trigger: CCCTGTAGGGCCGCTGGAGCAGGAGCCCCGATCCCACGTTTGGGCAGCTGACTCGCCTAAGGCCTCCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491791.1
CDS GCA 72 bp GGCGAGTCAGCTGCCCAAACGTGGGATCGGGGCTCCTaGTCCAGCGGCCCTACAGGGATTTCGGGAAGTACC +
Preference number: 6 (lower is better)
Translates to: GESAAQTWDRGS*SSGPTGISGST
Trigger: GGTACTTCCCGAAATCCCTGTAGGGCCGCTGGAGCAGGAGCCCCGATCCCACGTTTGGGCAGCTGACTCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491791.1
CDS GCA 72 bp ATTCCGCTTTCAGCTGGAGGCCTTAGGCGAGTCAGCTaGCCAAACGTGGGATCGGGGCTCCTGCTCCAGCGG +
Preference number: 6 (lower is better)
Translates to: IPLSAGGLRRVS*PNVGSGLLLQR
Trigger: CCGCTGGAGCAGGAGCCCCGATCCCACGTTTGGGCAGCTGACTCGCCTAAGGCCTCCAGCTGAAAGCGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491791.1
CDS TCA 72 bp ACCAGGGGTCATGCTCCCCAAGGGTCTCCATGGTGGTaGAGAGCTCGATGCAGTCTCTCAGGGCCACTGTGG +
Preference number: 6 (lower is better)
Translates to: TRGHAPQGSPWW*RARCSLSGPLW
Trigger: CCACAGTGGCCCTGAGAGACTGCATCGAGCTCTTCACCACCATGGAGACCCTTGGGGAGCATGACCCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
ENST00000485450.5
CDS TCA 72 bp AGTGTGGTCCTCATTAAGGGTCCAAGCTCGGACTTCTaGGTCTCCGCATCCGGTCGCTCACGGCAGCCTCCA +
Preference number: 6 (lower is better)
Translates to: SVVLIKGPSSDF*VSASGRSRQPP
Trigger: TGGAGGCTGCCGTGAGCGACCGGATGCGGAGACTCAGAAGTCCGAGCTTGGACCCTTAATGAGGACCACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000415188.1
ENST00000416417.5
ENST00000464168.5
ENST00000486549.5
CDS GCA 72 bp TCCAGCGGCCCTACAGGGATTTCGGGAAGTACCATGTaGACCAGCGCCTTGGGACCAAGACTCAATGGTGTG +
Preference number: 6 (lower is better)
Translates to: SSGPTGISGSTM*TSALGPRLNGV
Trigger: CACACCATTGAGTCTTGGTCCCAAGGCGCTGGTGCACATGGTACTTCCCGAAATCCCTGTAGGGCCGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491791.1
CDS CCA 72 bp CACCGGCTGTCAATAAGATACCACTGCGCCCCGCGTTaGAGTGTGGTCCTCATTAAGGGTCCAAGCTCGGAC +
Preference number: 6 (lower is better)
Translates to: HRLSIRYHCAPR*SVVLIKGPSSD
Trigger: GTCCGAGCTTGGACCCTTAATGAGGACCACACTCCAACGCGGGGCGCAGTGGTATCTTATTGACAGCCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000415188.1
ENST00000416417.5
CDS CCA 72 bp CTGACTCTCAGGATCACTGCGCCCCGCGTTGGAGTGTaGTCCTCATTAAGGGTCCAAGCTCGGACTTCTGAG +
Preference number: 6 (lower is better)
Translates to: LTLRITAPRVGV*SSLRVQARTSE
Trigger: CTCAGAAGTCCGAGCTTGGACCCTTAATGAGGACCACACTCCAACGCGGGGCGCAGTGATCCTGAGAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464168.5
ENST00000486549.5
CDS CCA 72 bp TCAAGGTCTGACTCTCAGGATCACTGCGCCCCGCGTTaGAGTGTGGTCCTCATTAAGGGTCCAAGCTCGGAC +
Preference number: 6 (lower is better)
Translates to: SRSDSQDHCAPR*SVVLIKGPSSD
Trigger: GTCCGAGCTTGGACCCTTAATGAGGACCACACTCCAACGCGGGGCGCAGTGATCCTGAGAGTCAGACCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464168.5
ENST00000486549.5
CDS GCA 72 bp GAAAAGCCAGATCCACCCCTGCTGACACCGGAACTGTaGATCCCACAGGTGCTAGTGCTATCACCATTTGCA +
Preference number: 6 (lower is better)
Translates to: EKPDPPLLTPEL*IPQVLVLSPFA
Trigger: TGCAAATGGTGATAGCACTAGCACCTGTGGGATGCACAGTTCCGGTGTCAGCAGGGGTGGATCTGGCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265560.9
ENST00000431357.1
ENST00000461553.1
ENST00000485450.5
ENST00000488520.5
CDS TCA 72 bp GGACACGGCAATGAGGTCGTACACATAAGGCCTTGCTaGCAGGTTACAGACAAACTCGGACATGTTCAGCCC +
Preference number: 6 (lower is better)
Translates to: GHGNEVVHIRPC*QVTDKLGHVQP
Trigger: GGGCTGAACATGTCCGAGTTTGTCTGTAACCTGTCAGCAAGGCCTTATGTGTACGACCTCATTGCCGTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
ENST00000485450.5
CDS TCA 72 bp TGTTCCAGAGCCGTGTTTCACGCTCCGCAGGGATGTTaGATAGCTTCCGCATCTCTTTCTCGATGGTTGCAA +
Preference number: 6 (lower is better)
Translates to: CSRAVFHAPQGC*IASASLSRWLQ
Trigger: TTGCAACCATCGAGAAAGAGATGCGGAAGCTATTCAACATCCCTGCGGAGCGTGAAACACGGCTCTGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000415188.1
ENST00000416417.5
ENST00000464168.5
ENST00000491791.1
CDS CAA 72 bp CGCATCTCTTTCTCGATGGTTGCAATGGTGTCTGCCTaGCTGAAATGGCAACTCAGCACATTGGTGGGGTCA +
Preference number: 6 (lower is better)
Translates to: RISFSMVAMVSA*LKWQLSTLVGS
Trigger: TGACCCCACCAATGTGCTGAGTTGCCATTTCAGCAAGGCAGACACCATTGCAACCATCGAGAAAGAGATGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000415188.1
ENST00000416417.5
ENST00000464168.5
ENST00000491791.1
CDS CAA 72 bp TTGTTCCAGAGCCGTGTTTCACGCTCCGCAGGGATGTaGAATAGCTTCCGCATCTCTTTCTCGATGGTTGCA +
Preference number: 6 (lower is better)
Translates to: LFQSRVSRSAGM*NSFRISFSMVA
Trigger: TGCAACCATCGAGAAAGAGATGCGGAAGCTATTCAACATCCCTGCGGAGCGTGAAACACGGCTCTGGAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000415188.1
ENST00000416417.5
ENST00000464168.5
ENST00000491791.1
CDS TCA 72 bp TCTCTTTCTCGATGGTTGCAATGGTGTCTGCCTTGCTaGAATGGCAACTCAGCACATTGGTGGGGTCACTGT +
Preference number: 6 (lower is better)
Translates to: SLSRWLQWCLPC*NGNSAHWWGHC
Trigger: ACAGTGACCCCACCAATGTGCTGAGTTGCCATTTCAGCAAGGCAGACACCATTGCAACCATCGAGAAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000415188.1
ENST00000416417.5
ENST00000464168.5
ENST00000491791.1
CDS TCA 72 bp GCTTATCCCTCCAGTATCTGTTGTAGGAGAAACGTTTaGGGTGGACCACCAGGATCTTGGGCAAGGACCATA +
Preference number: 6 (lower is better)
Translates to: AYPSSICCRRNV*GGPPGSWARTI
Trigger: TATGGTCCTTGCCCAAGATCCTGGTGGTCCACCTCAAACGTTTCTCCTACAACAGATACTGGAGGGATAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
ENST00000485450.5
CDS GCA 72 bp AACAGGCCATGCTCCACAACTTTTCTGACGATGGGTTaGTGGCCTTCTACACAGCCGTACCAGTTTAGTAGT +
Preference number: 6 (lower is better)
Translates to: NRPCSTTFLTMG*WPSTQPYQFSS
Trigger: ACTACTAAACTGGTACGGCTGTGTAGAAGGCCAGCAACCCATCGTCAGAAAAGTTGTGGAGCATGGCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000415188.1
ENST00000416417.5
ENST00000464168.5
ENST00000491791.1
CDS GCA 72 bp GTTAACTTGTGCTTGGGGACAGAAAGCAATAGTGGCTaGCCATATAGCGCTGATGCGGAGGAAGTGCTTGAT +
Preference number: 6 (lower is better)
Translates to: VNLCLGTESNSG*PYSADAEEVLD
Trigger: ATCAAGCACTTCCTCCGCATCAGCGCTATATGGGCAGCCACTATTGCTTTCTGTCCCCAAGCACAAGTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
ENST00000485450.5
CDS CCA 72 bp TTCTCGATGGTTGCAATGGTGTCTGCCTTGCTGAAATaGCAACTCAGCACATTGGTGGGGTCACTGTTCTCA +
Preference number: 6 (lower is better)
Translates to: FSMVAMVSALLK*QLSTLVGSLFS
Trigger: TGAGAACAGTGACCCCACCAATGTGCTGAGTTGCCATTTCAGCAAGGCAGACACCATTGCAACCATCGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000415188.1
ENST00000416417.5
ENST00000464168.5
ENST00000491791.1
CDS CCA 72 bp CAGCCTGGTACAAAGACTCAAGGGTTAACTTGTGCTTaGGGACAGAAAGCAATAGTGGCTGCCCATATAGCG +
Preference number: 6 (lower is better)
Translates to: QPGTKTQGLTCA*GQKAIVAAHIA
Trigger: CGCTATATGGGCAGCCACTATTGCTTTCTGTCCCCAAGCACAAGTTAACCCTTGAGTCTTTGTACCAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
ENST00000485450.5
CDS CCA 72 bp GGTGGCTTTCTTAACTTCAGGGACACCAATCTCTTCTaGCTCTGGGCTGGCAACCTTAAAGGGCCTTATAGA +
Preference number: 6 (lower is better)
Translates to: GGFLNFRDTNLF*LWAGNLKGPYR
Trigger: TCTATAAGGCCCTTTAAGGTTGCCAGCCCAGAGCCAGAAGAGATTGGTGTCCCTGAAGTTAAGAAAGCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462673.1
ENST00000488520.5
CDS CAA 90 bp ATGGTTGCAATGGTGTCTGCCTTGCTGAAATGGCAACTCAGCACATaGGTGGGGTCACTGTTCTCACAGAGCTTCAGTTCCAGCAAATAC +
Preference number: 6 (lower is better)
Translates to: MVAMVSALLKWQLST*VGSLFSQSFSSSKY
Trigger: GTATTTGCTGGAACTGAAGCTCTGTGAGAACAGTGACCCCACCAATGTGCTGAGTTGCCATTTCAGCAAGGCAGACACCATTGCAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000415188.1
ENST00000416417.5
ENST00000464168.5
ENST00000491791.1
CDS CAA 90 bp CTCATGTATTTGTTCCAGAGCCGTGTTTCACGCTCCGCAGGGATGTaGAATAGCTTCCGCATCTCTTTCTCGATGGTTGCAATGGTGTCT +
Preference number: 6 (lower is better)
Translates to: LMYLFQSRVSRSAGM*NSFRISFSMVAMVS
Trigger: AGACACCATTGCAACCATCGAGAAAGAGATGCGGAAGCTATTCAACATCCCTGCGGAGCGTGAAACACGGCTCTGGAACAAATACATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000415188.1
ENST00000416417.5
ENST00000464168.5
ENST00000491791.1
CDS CAA 90 bp CATGAAGCAGGTGTTTCCCAGGTTTCCAAGTCCACAGAGCCCAGGTaGTATATGAGAGGATGGTGGCTCCTGACAATTATACGAAGCAGA +
Preference number: 6 (lower is better)
Translates to: HEAGVSQVSKSTEPR*YMRGWWLLTIIRSR
Trigger: TCTGCTTCGTATAATTGTCAGGAGCCACCATCCTCTCATATACAACCTGGGCTCTGTGGACTTGGAAACCTGGGAAACACCTGCTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
ENST00000461553.1
ENST00000485450.5
ENST00000488520.5
CDS TCA 72 bp CCCCAAAAGTCAAGCTGTGACTCCACACCAACACTGTaGACACCATCTGTAGGCAAAGGTGGCTTTCTTAAC +
Preference number: 6 (lower is better)
Translates to: PQKSSCDSTPTL*TPSVGKGGFLN
Trigger: GTTAAGAAAGCCACCTTTGCCTACAGATGGTGTTCACAGTGTTGGTGTGGAGTCACAGCTTGACTTTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462673.1
CDS GCA 72 bp CAGTGTTGTCTAGCTTGCTCAACTGCTCGTAGGTGTTaGTCATGTATTTGTTCCAGAGCCGTGTTTCACGCT +
Preference number: 6 (lower is better)
Translates to: QCCLACSTARRC*SCICSRAVFHA
Trigger: AGCGTGAAACACGGCTCTGGAACAAATACATGAGCAACACCTACGAGCAGTTGAGCAAGCTAGACAACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000415188.1
ENST00000416417.5
ENST00000464168.5
ENST00000491791.1
CDS GCA 72 bp CAGATCCATTTGACTGCAAGGTCTGCCTGGGCCATGTaGCATCTTCATTTTGAGGCTCAATTACTAGCACCT +
Preference number: 6 (lower is better)
Translates to: QIHLTARSAWAM*HLHFEAQLLAP
Trigger: AGGTGCTAGTAATTGAGCCTCAAAATGAAGATGGCACATGGCCCAGGCAGACCTTGCAGTCAAATGGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351842.8
CDS GCA 72 bp GGTGCAGTGTTGCTCAAACATTTTCTGACGATGGGTTaGTGGCCTTCTACACAGCCGTACCAGTTTAGTAGT +
Preference number: 6 (lower is better)
Translates to: GAVLLKHFLTMG*WPSTQPYQFSS
Trigger: ACTACTAAACTGGTACGGCTGTGTAGAAGGCCAGCAACCCATCGTCAGAAAATGTTTGAGCAACACTGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486549.5
CDS CCA 72 bp AGGCCATGCTCCACAACTTTTCTGACGATGGGTTGCTaGCCTTCTACACAGCCGTACCAGTTTAGTAGTTTA +
Preference number: 6 (lower is better)
Translates to: RPCSTTFLTMGC*PSTQPYQFSSL
Trigger: TAAACTACTAAACTGGTACGGCTGTGTAGAAGGCCAGCAACCCATCGTCAGAAAAGTTGTGGAGCATGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000415188.1
ENST00000416417.5
ENST00000464168.5
ENST00000491791.1
CDS CCA 72 bp TCCAAGTCCACAGAGCCCAGGTTGTATATGAGAGGATaGTGGCTCCTGACAATTATACGAAGCAGAAAAGCC +
Preference number: 6 (lower is better)
Translates to: SKSTEPRLYMRG*WLLTIIRSRKA
Trigger: GGCTTTTCTGCTTCGTATAATTGTCAGGAGCCACCATCCTCTCATATACAACCTGGGCTCTGTGGACTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
ENST00000461553.1
ENST00000485450.5
ENST00000488520.5
CDS CCA 72 bp TTTCTTAACTTCAGGGACACCAATCTCTTCTGGCTCTaGGCTGGCAACCTTAAAGGGCCTTATAGACCTCAG +
Preference number: 6 (lower is better)
Translates to: FLNFRDTNLFWL*AGNLKGPYRPQ
Trigger: CTGAGGTCTATAAGGCCCTTTAAGGTTGCCAGCCCAGAGCCAGAAGAGATTGGTGTCCCTGAAGTTAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462673.1
ENST00000488520.5
CDS CCA 72 bp TACCATGTGCACCAGCGCCTTGGGACCAAGACTCAATaGTGTGTTGTAGTCATTAACAGTCGCCTTAAACAG +
Preference number: 6 (lower is better)
Translates to: YHVHQRLGTKTQ*CVVVINSRLKQ
Trigger: CTGTTTAAGGCGACTGTTAATGACTACAACACACCATTGAGTCTTGGTCCCAAGGCGCTGGTGCACATGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491791.1
CDS CAA 72 bp GGTGTTTCCCAGGTTTCCAAGTCCACAGAGCCCAGGTaGTATATGAGAGGATGGTGGCTCCTGACAATTATA +
Preference number: 6 (lower is better)
Translates to: GVSQVSKSTEPR*YMRGWWLLTII
Trigger: TATAATTGTCAGGAGCCACCATCCTCTCATATACAACCTGGGCTCTGTGGACTTGGAAACCTGGGAAACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
ENST00000461553.1
ENST00000485450.5
ENST00000488520.5
CDS CAA 72 bp ACAGCCTGGTACAAAGACTCAAGGGTTAACTTGTGCTaGGGGACAGAAAGCAATAGTGGCTGCCCATATAGC +
Preference number: 6 (lower is better)
Translates to: TAWYKDSRVNLC*GTESNSGCPYS
Trigger: GCTATATGGGCAGCCACTATTGCTTTCTGTCCCCAAGCACAAGTTAACCCTTGAGTCTTTGTACCAGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
ENST00000485450.5
CDS GCA 72 bp TGCTTGATTTTGACTGCAAGGTCTGCCTGGGCCATGTaGCATCTTCATTTTGAGGCTCAATTACTAGCACCT +
Preference number: 6 (lower is better)
Translates to: CLILTARSAWAM*HLHFEAQLLAP
Trigger: AGGTGCTAGTAATTGAGCCTCAAAATGAAGATGGCACATGGCCCAGGCAGACCTTGCAGTCAAAATCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265560.9
CDS GCA 72 bp CAAACAGCCTGGTACAAAGACTCAAGGGTTAACTTGTaGTTGGGGACAGAAAGCAATAGTGGCTGCCCATAT +
Preference number: 6 (lower is better)
Translates to: QTAWYKDSRVNL*LGTESNSGCPY
Trigger: ATATGGGCAGCCACTATTGCTTTCTGTCCCCAAGCACAAGTTAACCCTTGAGTCTTTGTACCAGGCTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
ENST00000485450.5
CDS GCA 72 bp ACGAAACTTTTGACTGCAAGGTCTGCCTGGGCCATGTaGCATCTTCATTTTGAGGCTCAATTACTAGCACCT +
Preference number: 6 (lower is better)
Translates to: TKLLTARSAWAM*HLHFEAQLLAP
Trigger: AGGTGCTAGTAATTGAGCCTCAAAATGAAGATGGCACATGGCCCAGGCAGACCTTGCAGTCAAAAGTTTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416417.5
CDS CCA 72 bp AAGTCCACAGAGCCCAGGTTGTATATGAGAGGATGGTaGCTCCTGACAATTATACGAAGCAGAAAAGCCAGA +
Preference number: 6 (lower is better)
Translates to: KSTEPRLYMRGW*LLTIIRSRKAR
Trigger: TCTGGCTTTTCTGCTTCGTATAATTGTCAGGAGCCACCATCCTCTCATATACAACCTGGGCTCTGTGGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
ENST00000461553.1
ENST00000485450.5
ENST00000488520.5
CDS CCA 72 bp CAGAAAAGCCAGATCCATTTGACTGCAAGGTCTGCCTaGGCCATGTGCCATCTTCATTTTGAGGCTCAATTA +
Preference number: 6 (lower is better)
Translates to: QKSQIHLTARSA*AMCHLHFEAQL
Trigger: TAATTGAGCCTCAAAATGAAGATGGCACATGGCCCAGGCAGACCTTGCAGTCAAATGGATCTGGCTTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351842.8
CDS TCA 72 bp GATCAAAAGTCAAGCTGTGACTCCACACCAACACTGTaGACACCATCTGTAGGCAAAGGTGGCTTTCTTAAC +
Preference number: 6 (lower is better)
Translates to: DQKSSCDSTPTL*TPSVGKGGFLN
Trigger: GTTAAGAAAGCCACCTTTGCCTACAGATGGTGTTCACAGTGTTGGTGTGGAGTCACAGCTTGACTTTTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488520.5
CDS CCA 72 bp GCAGTGTTGCTCAAACATTTTCTGACGATGGGTTGCTaGCCTTCTACACAGCCGTACCAGTTTAGTAGTTTA +
Preference number: 6 (lower is better)
Translates to: AVLLKHFLTMGC*PSTQPYQFSSL
Trigger: TAAACTACTAAACTGGTACGGCTGTGTAGAAGGCCAGCAACCCATCGTCAGAAAATGTTTGAGCAACACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486549.5
CDS CAA 72 bp GACTCTCAGGATCTGAAAATAGCCCAGAGTTGTCTATaGGGCCAGGAAATAGGTTATGTTCACCCACATTGT +
Preference number: 6 (lower is better)
Translates to: DSQDLKIAQSCL*GQEIGYVHPHC
Trigger: ACAATGTGGGTGAACATAACCTATTTCCTGGCCCAATAGACAACTCTGGGCTATTTTCAGATCCTGAGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000415188.1
ENST00000416417.5
ENST00000491791.1
CDS TCA 72 bp TGCAGACCTCGTACACGAAAATGTCATCCCGAGGCATaGTGTGGTTTAAACCTTCATCCATTTGGAAAATTT +
Preference number: 6 (lower is better)
Translates to: CRPRTRKCHPEA*CGLNLHPFGKF
Trigger: AAATTTTCCAAATGGATGAAGGTTTAAACCACATCATGCCTCGGGATGACATTTTCGTGTACGAGGTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
ENST00000485450.5
CDS GCA 72 bp TTTACCATTCAGTTTGTTCTTCGCATATGCAGTGTCTaGCAAGTCAACAAAGAAAATACTCTAGCGGTCTCC +
Preference number: 6 (lower is better)
Translates to: FTIQFVLRICSV*QVNKENTLAVS
Trigger: GGAGACCGCTAGAGTATTTTCTTTGTTGACTTGGCAGACACTGCATATGCGAAGAACAAACTGAATGGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483212.1
CDS CAA 72 bp GAAACCTTAGCACATTCTGGGCAAACCAAAGTAGATTaGAAGAGGCCATGGAAAGTATCCACAATCACAGAA +
Preference number: 6 (lower is better)
Translates to: ETLAHSGQTKVD*KRPWKVSTITE
Trigger: TTCTGTGATTGTGGATACTTTCCATGGCCTCTTCAAATCTACTTTGGTTTGCCCAGAATGTGCTAAGGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265560.9
ENST00000351842.8
ENST00000431357.1
ENST00000485450.5