RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP36 (Homo sapiens)

Ensembl gene IDs: ENSG00000055483

Ensembl transcript IDs: ENST00000312010.10, ENST00000449938.6, ENST00000542802.7, ENST00000586066.3, ENST00000586531.5, ENST00000586896.2, ENST00000587010.5, ENST00000587379.1, ENST00000587783.5, ENST00000588086.5, ENST00000588130.5, ENST00000588365.1, ENST00000588467.5, ENST00000589225.5, ENST00000589254.1, ENST00000589424.5, ENST00000590312.1, ENST00000590546.6, ENST00000591052.5, ENST00000591942.6, ENST00000592231.5, ENST00000592275.5, ENST00000592907.5

Found 1267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCAGGCCCCCGGAAAGGAGGTGCAGAGGATGGGACACAGACCTCTaGACACACACAGGTGCGGCCATGCAACCAGGACGCGGGGCAGGC +
Preference number: 1 (lower is better)
Translates to: PRPPERRCRGWDTDL*THTGAAMQPGRGAG
Trigger: GCCTGCCCCGCGTCCTGGTTGCATGGCCGCACCTGTGTGTGTGCAGAGGTCTGTGTCCCATCCTCTGCACCTCCTTTCCGGGGGCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR CCA 90 bp GCGGGCTCGGACACAACGGTGGCGTCAGCCCCGAGAAGCAAGGGATaGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGG +
Preference number: 1 (lower is better)
Translates to: AGSDTTVASAPRSKG*LAQSHQLCTGRPPG
Trigger: CCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR TCA 90 bp ACACACACAGGTGCGGCCATGCAACCAGGACGCGGGGCAGGCAAGTaGGAGGACCTGGGAGAGGTAGCTGCTGTACACAGGCCCCACTCC +
Preference number: 1 (lower is better)
Translates to: THTGAAMQPGRGAGK*EDLGEVAAVHRPHS
Trigger: GGAGTGGGGCCTGTGTACAGCAGCTACCTCTCCCAGGTCCTCTCACTTGCCTGCCCCGCGTCCTGGTTGCATGGCCGCACCTGTGTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR GCA 90 bp ACCAGGACGCGGGGCAGGCAAGTGAGAGGACCTGGGAGAGGTAGCTaGTGTACACAGGCCCCACTCCCTCCAGCTCCATTCCCAAGCACA +
Preference number: 1 (lower is better)
Translates to: TRTRGRQVRGPGRGS*CTQAPLPPAPFPST
Trigger: TGTGCTTGGGAATGGAGCTGGAGGGAGTGGGGCCTGTGTACAGCAGCTACCTCTCCCAGGTCCTCTCACTTGCCTGCCCCGCGTCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR GCA 90 bp GGTCTGCTAACATATTTCCCCCTGACTGAGCTGCTCAGACACAGCTaGCGCCACCACAGCCACCCGATCCTACCAAGCCGCCCCGGACCA +
Preference number: 1 (lower is better)
Translates to: GLLTYFPLTELLRHS*RHHSHPILPSRPGP
Trigger: TGGTCCGGGGCGGCTTGGTAGGATCGGGTGGCTGTGGTGGCGGCAGCTGTGTCTGAGCAGCTCAGTCAGGGGGAAATATGTTAGCAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590546.6
3UTR GCA 90 bp CCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTaGAGAACAAACCACGGTAGTCCTGACAGAGAGAAACGAGACCCG +
Preference number: 1 (lower is better)
Translates to: PDRQLPGRDALSPGG*RTNHGSPDREKRDP
Trigger: CGGGTCTCGTTTCTCTCTGTCAGGACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR CCA 90 bp TCTAGAGAAGCCTCAAAGCCTCTGTGTTGGGCGGTCTGTGGACACTaGTACCGGGAGAGCTCCTACCGTGACAGGCTCCCAGCGCAGCAG +
Preference number: 1 (lower is better)
Translates to: SREASKPLCWAVCGH*YRESSYRDRLPAQQ
Trigger: CTGCTGCGCTGGGAGCCTGTCACGGTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGCCCAACACAGAGGCTTTGAGGCTTCTCTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR TCA 90 bp CGAGGGCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTaGGAGCTACTCACAAGGAAGGGGTGCACAGTAGGGCCACCCTCT +
Preference number: 1 (lower is better)
Translates to: RGLLRPQIASALQDS*ELLTRKGCTVGPPS
Trigger: AGAGGGTGGCCCTACTGTGCACCCCTTCCTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGCCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR TCA 90 bp CAGGGGCAGCAGCCTCTGCCAGCACAGACCACTGTCTATGAAACATaGGAAGGCACAGCCTGGCAAAGATGTCCAGCAGGTGTGCGGCCA +
Preference number: 1 (lower is better)
Translates to: QGQQPLPAQTTVYET*EGTAWQRCPAGVRP
Trigger: TGGCCGCACACCTGCTGGACATCTTTGCCAGGCTGTGCCTTCTCATGTTTCATAGACAGTGGTCTGTGCTGGCAGAGGCTGCTGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR TCA 90 bp CACACCCCCTTATACACACGCATCCCACACACACCCTTCTCCAAGTaGCTAGGACACACACCACAGACGCGCCCACACCACACACACCAC +
Preference number: 1 (lower is better)
Translates to: HTPLYTRIPHTPFSK*LGHTPQTRPHHTHH
Trigger: GTGGTGTGTGTGGTGTGGGCGCGTCTGTGGTGTGTGTCCTAGTCACTTGGAGAAGGGTGTGTGTGGGATGCGTGTGTATAAGGGGGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR TCA 90 bp CCCCAACCAGGGGCAGCAGCCTCTGCCAGCACAGACCACTGTCTATaGAACATGAGAAGGCACAGCCTGGCAAAGATGTCCAGCAGGTGT +
Preference number: 1 (lower is better)
Translates to: PQPGAAASASTDHCL*NMRRHSLAKMSSRC
Trigger: ACACCTGCTGGACATCTTTGCCAGGCTGTGCCTTCTCATGTTTCATAGACAGTGGTCTGTGCTGGCAGAGGCTGCTGCCCCTGGTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR TCA 90 bp CAGAGAGAAACGAGACCCGAATCTTCCCACTGCCACCCTCGGGTATaGGTCCAACCTAGGAACCCAATGCATGGCATCTCGATGCGGCTG +
Preference number: 1 (lower is better)
Translates to: QRETRPESSHCHPRV*VQPRNPMHGISMRL
Trigger: CAGCCGCATCGAGATGCCATGCATTGGGTTCCTAGGTTGGACTCATACCCGAGGGTGGCAGTGGGAAGATTCGGGTCTCGTTTCTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR GCA 90 bp CTTCCCACTGCCACCCTCGGGTATGAGTCCAACCTAGGAACCCAATaGATGGCATCTCGATGCGGCTGGCAAGAAGTCACCCTTCTGCAA +
Preference number: 1 (lower is better)
Translates to: LPTATLGYESNLGTQ*MASRCGWQEVTLLQ
Trigger: TTGCAGAAGGGTGACTTCTTGCCAGCCGCATCGAGATGCCATGCATTGGGTTCCTAGGTTGGACTCATACCCGAGGGTGGCAGTGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR GCA 90 bp CAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTaGAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCTAGAG +
Preference number: 1 (lower is better)
Translates to: QVCGHLCSHTHCRFS*RAGRECHQRGSDLE
Trigger: CTCTAGATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR CCA 90 bp TCACCAAAGAGGTTCCGATCTAGAGAAGCCTCAAAGCCTCTGTGTTaGGCGGTCTGTGGACACTGGTACCGGGAGAGCTCCTACCGTGAC +
Preference number: 1 (lower is better)
Translates to: SPKRFRSREASKPLC*AVCGHWYRESSYRD
Trigger: GTCACGGTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGCCCAACACAGAGGCTTTGAGGCTTCTCTAGATCGGAACCTCTTTGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR GCA 90 bp ATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATAGCCTCTaGTCTCCAGGACAGTTGAGAGCTACTCACAAGGAAGGGGTGCAC +
Preference number: 1 (lower is better)
Translates to: MYSQVSRAPPTPNSL*SPGQLRATHKEGVH
Trigger: GTGCACCCCTTCCTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAATACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR CCA 90 bp CGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTaGTCGGGAATGTCACCAAAGAGGTTCCGATCTAGAGAAGCCTCA +
Preference number: 1 (lower is better)
Translates to: RPPLLTHTLSFLLQG*SGMSPKRFRSREAS
Trigger: TGAGGCTTCTCTAGATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR TCA 90 bp GCATGGCATCTCGATGCGGCTGGCAAGAAGTCACCCTTCTGCAAGTaGCTGGGACACATGCCAGATATACACACAACCCACATCCCACAC +
Preference number: 1 (lower is better)
Translates to: AWHLDAAGKKSPFCK*LGHMPDIHTTHIPH
Trigger: GTGTGGGATGTGGGTTGTGTGTATATCTGGCATGTGTCCCAGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCATCGAGATGCCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR GCA 90 bp CTCGGGTATGAGTCCAACCTAGGAACCCAATGCATGGCATCTCGATaGGGCTGGCAAGAAGTCACCCTTCTGCAAGTGACTGGGACACAT +
Preference number: 1 (lower is better)
Translates to: LGYESNLGTQCMASR*GWQEVTLLQVTGTH
Trigger: ATGTGTCCCAGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCATCGAGATGCCATGCATTGGGTTCCTAGGTTGGACTCATACCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR GCA 90 bp ATGAAACATGAGAAGGCACAGCCTGGCAAAGATGTCCAGCAGGTGTaGGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGG +
Preference number: 1 (lower is better)
Translates to: MKHEKAQPGKDVQQV*GHLCSHTHCRFSCR
Trigger: CCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGGCTGTGCCTTCTCATGTTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR GCA 90 bp ATGCCAGATATACACACAACCCACATCCCACACACACCCCACACATaGCCTTCTCCAAGTGACCAGAACACATGCCACAGATGCCAGGTG +
Preference number: 1 (lower is better)
Translates to: MPDIHTTHIPHTPHT*PSPSDQNTCHRCQV
Trigger: CACCTGGCATCTGTGGCATGTGTTCTGGTCACTTGGAGAAGGGCATGTGTGGGGTGTGTGTGGGATGTGGGTTGTGTGTATATCTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR GCA 90 bp ATGCGGCTGGCAAGAAGTCACCCTTCTGCAAGTGACTGGGACACATaGCAGATATACACACAACCCACATCCCACACACACCCCACACAT +
Preference number: 1 (lower is better)
Translates to: MRLARSHPSASDWDT*QIYTQPTSHTHPTH
Trigger: ATGTGTGGGGTGTGTGTGGGATGTGGGTTGTGTGTATATCTGGCATGTGTCCCAGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR GCA 90 bp TCGGTGGAGGGAAGGGACGTGACTCCACCCAACAGTGATAAACGCTaGAGAAAGTCATCTCGTGCTCACCACTGCCCAAGAGTTAACGAA +
Preference number: 1 (lower is better)
Translates to: SVEGRDVTPPNSDKR*RKSSRAHHCPRVNE
Trigger: TTCGTTAACTCTTGGGCAGTGGTGAGCACGAGATGACTTTCTGCAGCGTTTATCACTGTTGGGTGGAGTCACGTCCCTTCCCTCCACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR CCA 90 bp TATGAGTCCAACCTAGGAACCCAATGCATGGCATCTCGATGCGGCTaGCAAGAAGTCACCCTTCTGCAAGTGACTGGGACACATGCCAGA +
Preference number: 1 (lower is better)
Translates to: YESNLGTQCMASRCG*QEVTLLQVTGTHAR
Trigger: TCTGGCATGTGTCCCAGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCATCGAGATGCCATGCATTGGGTTCCTAGGTTGGACTCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR GCA 90 bp TCTCGTGAATCAGCACCGCTTGATCATCCTGCCCGTGAAGGCATGTaGTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCA +
Preference number: 1 (lower is better)
Translates to: SRESAPLDHPAREGM*FPFQISYKARARKP
Trigger: TGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCACATGCCTTCACGGGCAGGATGATCAAGCGGTGCTGATTCACGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589225.5
ENST00000591052.5
3UTR GCA 90 bp ATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTaGGGGTTATTGCAGCTGCAAGGGAAGCTACAGCACAGTCGTCTC +
Preference number: 1 (lower is better)
Translates to: INGEFYPKASTSVKT*GLLQLQGKLQHSRL
Trigger: GAGACGACTGTGCTGTAGCTTCCCTTGCAGCTGCAATAACCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR GCA 90 bp AACACCCCGAGAAGAAAAGGAACATACCCTGCCCGTGAAGGCATGTaGTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCA +
Preference number: 1 (lower is better)
Translates to: NTPRRKGTYPAREGM*FPFQISYKARARKP
Trigger: TGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCACATGCCTTCACGGGCAGGGTATGTTCCTTTTCTTCTCGGGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR TCA 90 bp AATGCAAGTCAACACCCCGAGAAGAAAAGGAACATACCCTGCCCGTaGAGGCATGTGCTTTCCCTTCCAGATAAGTTACAAAGCCAGAGC +
Preference number: 1 (lower is better)
Translates to: NASQHPEKKRNIPCP*RHVLSLPDKLQSQS
Trigger: GCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCACATGCCTTCACGGGCAGGGTATGTTCCTTTTCTTCTCGGGGTGTTGACTTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR TCA 90 bp TGGGTTATTGACATTTACTTACATACGTGTACAAGACCTAGAGTTTaGACTCGTTTTCTGGGCCTCATCTTTCCCTTCCCTATCTGGTTG +
Preference number: 1 (lower is better)
Translates to: WVIDIYLHTCTRPRV*TRFLGLIFPFPIWL
Trigger: CAACCAGATAGGGAAGGGAAAGATGAGGCCCAGAAAACGAGTTCAAACTCTAGGTCTTGTACACGTATGTAAGTAAATGTCAATAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR TCA 90 bp CAATACAAGGAAGTCCTAAGCATTTCCTGCCTGTTTTCTTTGGTCTaGACCTATGAACTCAGGAATGACACAAAGACAATTTGTGATGGC +
Preference number: 1 (lower is better)
Translates to: QYKEVLSISCLFSLV*TYELRNDTKTICDG
Trigger: GCCATCACAAATTGTCTTTGTGTCATTCCTGAGTTCATAGGTTCAGACCAAAGAAAACAGGCAGGAAATGCTTAGGACTTCCTTGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
3UTR CAA 90 bp GCTCGGACACAACGGTGGCGTCAGCCCCGAGAAGCAAGGGATGGCTaGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGAC +
Preference number: 2 (lower is better)
Translates to: ARTQRWRQPREARDG*PRATSYAPGDHLGD
Trigger: GTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR CCA 90 bp AGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACGCGGTCTGTGGACACTaGTACCGGGAGAGCTCCTAC +
Preference number: 2 (lower is better)
Translates to: RDGLPRATSYAPGDHLGDAVCGH*YRESSY
Trigger: GTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGC...GTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR GCA 90 bp GTTGTCCATCTCCACCTGCGACGACTCCGGGAGGAAATGACGGGGACAGACCCGGATGTCCAGCAGGTGTaGGGCCACCTCTGCTCACAC +
Preference number: 2 (lower is better)
Translates to: VVHLHLRRLREEMTGTDPDVQQV*GHLCSH
Trigger: GTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATC...CGGGTCTGTCCCCGTCATTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR GCA 90 bp CACAGGTGCGGCCATGCAACCAGGACGCGGGGCAGGCAAGTGAGAGGACCTGGGGCGGGTTATTGCAGCTaGAAGGGAAGCTACAGCACA +
Preference number: 2 (lower is better)
Translates to: HRCGHATRTRGRQVRGPGAGYCS*KGSYST
Trigger: TGTGCTGTAGCTTCCCTTGCAGCTGCAATAACCCGC...CCCAGGTCCTCTCACTTGCCTGCCCCGCGTCCTGGTTGCATGGCCGCACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR-3UTR CCA 90 bp GGTACCGGGAGAGCTCCTACCGTGACAGGCTCCCAGCGCAGCAGAGCCCACACAGCATCTCGATGCGGCTaGCAAGAAGTCACCCTTCTG +
Preference number: 2 (lower is better)
Translates to: GTGRAPTVTGSQRSRAHTASRCG*QEVTLL
Trigger: CAGAAGGGTGACTTCTTGCCAGCCGCATCGAGATGC...TGTGTGGGCTCTGCTGCGCTGGGAGCCTGTCACGGTAGGAGCTCTCCCGGTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR-3UTR CCA 90 bp AGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACTCAAAGCCTCTGTGTTaGGCGGTCTGTGGACACTGG +
Preference number: 2 (lower is better)
Translates to: RDGLPRATSYAPGDHLGDSKPLC*AVCGHW
Trigger: CCAGTGTCCACAGACCGCCCAACACAGAGGCTTTGA...GTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR CAA 90 bp AGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTaGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCCTCCTTCC +
Preference number: 2 (lower is better)
Translates to: RAPSDPDRQLPGRDA*SPGGCRTNHGSPPS
Trigger: GGAAGGAGGACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587379.1
ENST00000592231.5
3UTR-3UTR GCA 90 bp AGCTTCCCTGGTGGCAGCTGCGAGCATGCTCCTTGGAGAGCAGGTAGTTGGCTAAAGGTTGTGGAGTCCTaGGCCCACGCGGAAGACCCG +
Preference number: 2 (lower is better)
Translates to: SFPGGSCEHAPWRAGSWLKVVES*AHAEDP
Trigger: CGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTT...TAGCCAACTACCTGCTCTCCAAGGAGCATGCTCGCAGCTGCCACCAGGGAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
3UTR-3UTR CCA 90 bp AGCTTCCCTGGTGGCAGCTGCGAGCATGCTCCTTGGAGAGCAGGTAGTTGGCTAGTGTTGCCAAGGTTGTaGAGTCCTGCGCCCACGCGG +
Preference number: 2 (lower is better)
Translates to: SFPGGSCEHAPWRAGSWLVLPRL*SPAPTR
Trigger: CCGCGTGGGCGCAGGACTCCACAACCTTGGCAACAC...TAGCCAACTACCTGCTCTCCAAGGAGCATGCTCGCAGCTGCCACCAGGGAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
3UTR CAA 90 bp AGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTaGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCCTGACAGA +
Preference number: 2 (lower is better)
Translates to: RAPSDPDRQLPGRDA*SPGGCRTNHGSPDR
Trigger: TCTGTCAGGACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR CAA 90 bp AAGCCCCAAGCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCTaGATCATCGTGACAGGCTCCCAGCGCAGCAGAGCCCACACAGAG +
Preference number: 2 (lower is better)
Translates to: KPQALEASTLVNQHR*IIVTGSQRSRAHTE
Trigger: CTCTGTGTGGGCTCTGCTGCGCTGGGAGCCTGTCACGATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGCTTGGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587010.5
3UTR-3UTR TCA 90 bp CCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAAGGGAGAGCTCCTACCGTaGCAGGCTCCCAGCGCAGCA +
Preference number: 2 (lower is better)
Translates to: PPTPNSLCSPGQLRATHKGELLP*QAPSAA
Trigger: TGCTGCGCTGGGAGCCTGTCACGGTAGGAGCTCTCC...CTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR TCA 90 bp AACACCCCGAGAAGAAAAGGAACATACCCTGCCCGTGAAGGCATGTGCTTTCCCATGAAGGGGTCCCGCTaGGGAAGCAGGGGAGGGCGG +
Preference number: 2 (lower is better)
Translates to: NTPRRKGTYPAREGMCFPMKGSR*GSRGGR
Trigger: CCGCCCTCCCCTGCTTCCTCAGCGGGACCCCTTCAT...GGGAAAGCACATGCCTTCACGGGCAGGGTATGTTCCTTTTCTTCTCGGGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR-3UTR GCA 90 bp GATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGAACACATGCCACAGATaGCAGGTGTACACACCCCAC +
Preference number: 2 (lower is better)
Translates to: DGLPRATSYAPGDHLGDMNTCHR*QVYTPH
Trigger: GTGGGGTGTGTACACCTGGCATCTGTGGCATGTGTT...CATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR-3UTR GCA 90 bp GGCGGGCTCGGACACAACGGTGGCGTCAGCCCCGAGAAGCAAGGGATGGCTTGCAGTGACTGGGACACATaGCAGATATACACACAACCC +
Preference number: 2 (lower is better)
Translates to: GGLGHNGGVSPEKQGMACSDWDT*QIYTQP
Trigger: GGGTTGTGTGTATATCTGGCATGTGTCCCAGTCACT...GCAAGCCATCCCTTGCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR-3UTR TCA 90 bp GCTGTACACAGGCCCCACTCCCTCCAGCTCCATTCCCAAGCACAAAATTCAACAGGAGAGCTCCTACCGTaGCAGGCTCCCAGCGCAGCA +
Preference number: 2 (lower is better)
Translates to: AVHRPHSLQLHSQAQNSTGELLP*QAPSAA
Trigger: TGCTGCGCTGGGAGCCTGTCACGGTAGGAGCTCTCC...TGTTGAATTTTGTGCTTGGGAATGGAGCTGGAGGGAGTGGGGCCTGTGTACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR-3UTR TCA 90 bp AGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACACTGTCTATGAAACATaGGAAGGCACAGCCTGGCAA +
Preference number: 2 (lower is better)
Translates to: RDGLPRATSYAPGDHLGDTVYET*EGTAWQ
Trigger: TTGCCAGGCTGTGCCTTCTCATGTTTCATAGACAGT...GTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR TCA 90 bp CCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCAACAGACCACTGTCTATaGAACATGAGAAGGCACAGC +
Preference number: 2 (lower is better)
Translates to: PPAMHRETTWGTCGHHPPTDHCL*NMRRHS
Trigger: GCTGTGCCTTCTCATGTTTCATAGACAGTGGTCTGT...TGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR GCA 90 bp CCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCACACACCCCACACATaGCCTTCTCCAAGTGACCAG +
Preference number: 2 (lower is better)
Translates to: PGKDVQQVCGHLCSHTHCHTPHT*PSPSDQ
Trigger: CTGGTCACTTGGAGAAGGGCATGTGTGGGGTGTGTG...ACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR-3UTR GCA 90 bp CACAGGCCCCACTCCCTCCAGCTCCATTCCCAAGCACAAAATTCAACAGACCCAAGCAGCTCCACTCACTaGTGCTGGGACACAGGTGGC +
Preference number: 2 (lower is better)
Translates to: HRPHSLQLHSQAQNSTDPSSSTH*CWDTGG
Trigger: GCCACCTGTGTCCCAGCAGCAGTGAGTGGAGCTGCT...TGGGTCTGTTGAATTTTGTGCTTGGGAATGGAGCTGGAGGGAGTGGGGCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR-3UTR CCA 90 bp AGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATAGCCTCTGCTGCGGTCTGTGGACACTaGTACCGGGAGAGCTCCTAC +
Preference number: 2 (lower is better)
Translates to: SRCIRRYRGLLRPQIASAAVCGH*YRESSY
Trigger: GTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGC...AGCAGAGGCTATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR CAA 90 bp GCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTaGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCTAGA +
Preference number: 2 (lower is better)
Translates to: AGVRPPLLTHTLSFL*QGWSGMSPKRFRSR
Trigger: TCTAGATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR TCA 90 bp GAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGTCAATGCAGGAGAGGGCACCCTaGGCAGCTCCACTCACTGCT +
Preference number: 2 (lower is better)
Translates to: EQISVRGTVRVLGTHRSMQERAP*AAPLTA
Trigger: AGCAGTGAGTGGAGCTGCTCAGGGTGCCCTCTCCTG...CATTGACCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589225.5
ENST00000591052.5
3UTR-3UTR TCA 90 bp AGGAGGTCTAAGTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGAACATACCCTGCCCGTaGAGGCATGTGCTTTCCCTT +
Preference number: 2 (lower is better)
Translates to: RRSKSNTTLSISTCDDSGNIPCP*RHVLSL
Trigger: AAGGGAAAGCACATGCCTTCACGGGCAGGGTATGTT...CCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGACTTAGACCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR-3UTR CCA 90 bp CAGCCTGGAAAGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATAAAGGGAGAGGTGGCTaGGTGGGGTCACCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: QPGKQMYSQVSRAPPTPNKGRGG*VGSPLP
Trigger: AGGAAGAGGTGACCCCACCCAGCCACCTCTCCCTTT...ATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCTTTCCAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR GCA 90 bp ATGAGAAGGCACAGCCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACCCAACACACATGTaGCAGATACACAGCCCACAT +
Preference number: 2 (lower is better)
Translates to: MRRHSLAKMSSRCAATSAHPTHM*QIHSPH
Trigger: ATGTGGGCTGTGTATCTGGCACATGTGTGTTGGGTG...AGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGGCTGTGCCTTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR-3UTR GCA 90 bp TCTAGAGAAGCCTCAAAGCCTCTGTGTTGGGCGGTCTGTGGACACTGGTACCGGAACACATGCCACAGATaGCAGGTGTACACACCCCAC +
Preference number: 2 (lower is better)
Translates to: SREASKPLCWAVCGHWYRNTCHR*QVYTPH
Trigger: GTGGGGTGTGTACACCTGGCATCTGTGGCATGTGTT...CCGGTACCAGTGTCCACAGACCGCCCAACACAGAGGCTTTGAGGCTTCTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR-3UTR TCA 90 bp GAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGTCAATGTGCCACCCTCGGGTATaGGTCCAACCTAGGAACCCA +
Preference number: 2 (lower is better)
Translates to: EQISVRGTVRVLGTHRSMCHPRV*VQPRNP
Trigger: TGGGTTCCTAGGTTGGACTCATACCCGAGGGTGGCA...CATTGACCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
3UTR-3UTR TCA 90 bp GTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGAGGAAATGACGACTGTCTATGAAACATaGGAAGGCACAGCCTGGCAA +
Preference number: 2 (lower is better)
Translates to: VQHHVVHLHLRRLREEMTTVYET*EGTAWQ
Trigger: TTGCCAGGCTGTGCCTTCTCATGTTTCATAGACAGT...CGTCATTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR CCA 90 bp CAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGTTTCTCTTGCAGGGCTaGTCGGGAATGTCACCAAAG +
Preference number: 2 (lower is better)
Translates to: QSTEARPSSLNIQRLVRRFLLQG*SGMSPK
Trigger: CTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAA...CCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR CCA 90 bp CCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTTCCACTCACTGCTGCTaGGACACAGGTGGCCACAGG +
Preference number: 2 (lower is better)
Translates to: PDKLQSQSTEARPSSLNISTHCC*DTGGHR
Trigger: CCTGTGGCCACCTGTGTCCCAGCAGCAGTGAGTGGA...AATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000542802.7
ENST00000587379.1
ENST00000589225.5
ENST00000591052.5
ENST00000592231.5
3UTR-3UTR TCA 90 bp AGGGCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACTTCCCACTACTATaGGGGCATTTGTCTTTTTCC +
Preference number: 2 (lower is better)
Translates to: RAPPTPNSLCSPGQLRATHFPLL*GHLSFS
Trigger: GGAAAAAGACAAATGCCCTCATAGTAGTGGGAAGTG...AGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR TCA 90 bp CCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTGTGGCCACAGGAGCTTaGTTCTCTCCCACCCTTCTC +
Preference number: 2 (lower is better)
Translates to: PDKLQSQSTEARPSSLNIVATGA*FSPTLL
Trigger: GAGAAGGGTGGGAGAGAATCAAGCTCCTGTGGCCAC...AATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591052.5
3UTR-3UTR GCA 90 bp CACAGGCCCCACTCCCTCCAGCTCCATTCCCAAGCACAAAATTCAACAGACCCATCTCGTGCTCACCACTaGCCAAGAGTTAACGAATGT +
Preference number: 2 (lower is better)
Translates to: HRPHSLQLHSQAQNSTDPSRAHH*PRVNEC
Trigger: ACATTCGTTAACTCTTGGGCAGTGGTGAGCACGAGA...TGGGTCTGTTGAATTTTGTGCTTGGGAATGGAGCTGGAGGGAGTGGGGCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR CAA 90 bp GAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGTTATaGCAGCTGCAAGGGAAGCTACAGCACAGTCGTCTCAGAATAAAC +
Preference number: 2 (lower is better)
Translates to: EFYPKASTSVKTCGL*QLQGKLQHSRLRIN
Trigger: GTTTATTCTGAGACGACTGTGCTGTAGCTTCCCTTGCAGCTGCAATAACCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR TCA 90 bp CCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTAAGCCTCCACCTCAGTaGAGACCTGCGGGTTATTGC +
Preference number: 2 (lower is better)
Translates to: PDKLQSQSTEARPSSLNIKPPPQ*RPAGYC
Trigger: GCAATAACCCGCAGGTCTTCACTGAGGTGGAGGCTT...AATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR TCA 90 bp CCACCCAACAGTGATAAACGCTGCAGAAAGTCATCTCGTGCTCACCACTGCCCACACTTCCCACTACTATaGGGGCATTTGTCTTTTTCC +
Preference number: 2 (lower is better)
Translates to: PPNSDKRCRKSSRAHHCPHFPLL*GHLSFS
Trigger: GGAAAAAGACAAATGCCCTCATAGTAGTGGGAAGTG...TGGGCAGTGGTGAGCACGAGATGACTTTCTGCAGCGTTTATCACTGTTGGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR-3UTR TCA 90 bp CATGTGCTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTTCAGTGGGATGTATTaGCTGGATCAGTTGATTCTG +
Preference number: 2 (lower is better)
Translates to: HVLSLPDKLQSQSTEARPFSGMY*LDQLIL
Trigger: CAGAATCAACTGATCCAGTCAATACATCCCACTGAA...GGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587379.1
3UTR-3UTR CCA 90 bp CCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTTTTCTCTTGCAGGGCTaGTCGGGAATGTCACCAAAG +
Preference number: 2 (lower is better)
Translates to: PDKLQSQSTEARPSSLNIFLLQG*SGMSPK
Trigger: CTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAA...AATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR GCA 90 bp ACAAGTTGGCAGGCACAGCTTGAGCAACATAGAAAAGTAATCTTCTTGAGTTATAGGGGCAGCAGCCTCTaGCAGCACAGACCACTGTCT +
Preference number: 2 (lower is better)
Translates to: TSWQAQLEQHRKVIFLSYRGSSL*QHRPLS
Trigger: AGACAGTGGTCTGTGCTGGCAGAGGCTGCTGCCCCT...ATAACTCAAGAAGATTACTTTTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR CCA 90 bp CACAGGCCCCACTCCCTCCAGCTCCATTCCCAAGCACAAAATTCAACAGACCCATGGAAGCCACAGGACTaGTCAAAAATAAATGTTTTG +
Preference number: 2 (lower is better)
Translates to: HRPHSLQLHSQAQNSTDPWKPQD*SKINVL
Trigger: CAAAACATTTATTTTTGACCAGTCCTGTGGCTTCCA...TGGGTCTGTTGAATTTTGTGCTTGGGAATGGAGCTGGAGGGAGTGGGGCCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR-3UTR CCA 90 bp TTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATAGAAGCGGTCTGTGGACACTaGTACCGGGAGAGCTCCTAC +
Preference number: 2 (lower is better)
Translates to: FPVFIKLQVGRHSLSNIEAVCGH*YRESSY
Trigger: GTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGC...TTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR TCA 90 bp CAGGAATGCAAGTCAACACCCCGAGAAGAAAAGGAACATACCCTGCCCGTGAAGAAGCACTCACAAAATTaGGCAAACAAAGCCACTATT +
Preference number: 2 (lower is better)
Translates to: QECKSTPREEKEHTLPVKKHSQN*ANKATI
Trigger: AATAGTGGCTTTGTTTGCTCAATTTTGTGAGTGCTT...CTTCACGGGCAGGGTATGTTCCTTTTCTTCTCGGGGTGTTGACTTGCATTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR-3UTR TCA 90 bp AAGTATTTCTACGATCCTAAGCTGAGGCAATACAAGGAAGTCCTAAGCATTTCCATATTTCCCCCTGACTaGGCTGCTCAGACACAGCTG +
Preference number: 2 (lower is better)
Translates to: KYFYDPKLRQYKEVLSISIFPPD*AAQTQL
Trigger: CAGCTGTGTCTGAGCAGCTCAGTCAGGGGGAAATAT...GGAAATGCTTAGGACTTCCTTGTATTGCCTCAGCTTAGGATCGTAGAAATACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590546.6
3UTR-3UTR GCA 90 bp AGTAGTAAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCCACCCAACACACATGTaGCAGATACACAGCCCACAT +
Preference number: 2 (lower is better)
Translates to: SSKINGEFYPKASTSVKTHPTHM*QIHSPH
Trigger: ATGTGGGCTGTGTATCTGGCACATGTGTGTTGGGTG...GGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTTACTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR-3UTR GCA 90 bp CAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGAAGCCACTGCATGGCATCTCGATaGGGCTGGCAAGAAGTCACC +
Preference number: 2 (lower is better)
Translates to: QSHYLHIWERKHIANGSHCMASR*GWQEVT
Trigger: GGTGACTTCTTGCCAGCCGCATCGAGATGCCATGCA...GTGGCTTCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR-3UTR GCA 90 bp AGCAAACAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGATTGTCCATCTCCACCTaGGACGACTCCGGGAGGAAA +
Preference number: 2 (lower is better)
Translates to: SKQSHYLHIWERKHIANGLSIST*DDSGRK
Trigger: TTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAA...TCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTGTTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR TCA 90 bp AAGTATTTCTACGATCCTAAGCTGAGGCAATACAAGGAAGTCCTAAGCATTTCCCACAAAGACAATTTGTaGTGGCAACCATCACATATA +
Preference number: 2 (lower is better)
Translates to: KYFYDPKLRQYKEVLSISHKDNL*WQPSHI
Trigger: TATATGTGATGGTTGCCATCACAAATTGTCTTTGTG...GGAAATGCTTAGGACTTCCTTGTATTGCCTCAGCTTAGGATCGTAGAAATACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590546.6
3UTR CAA 90 bp TTAAATTCCAAAGCACTCACAAAATTGAGCAAACAAAGCCACTATTaGCATATTTGGGAAAGGAAACATATTGCTAATGGAAGCCACAGG +
Preference number: 2 (lower is better)
Translates to: LNSKALTKLSKQSHY*HIWERKHIANGSHR
Trigger: CCTGTGGCTTCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTGTTTGCTCAATTTTGTGAGTGCTTTGGAATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR TCA 72 bp GGTGCGGCCATGCAACCAGGACGCGGGGCAGGCAAGTaGGAGGACCTGGGAGAGGTAGCTGCTGTACACAGG +
Preference number: 3 (lower is better)
Translates to: GAAMQPGRGAGK*EDLGEVAAVHR
Trigger: CCTGTGTACAGCAGCTACCTCTCCCAGGTCCTCTCACTTGCCTGCCCCGCGTCCTGGTTGCATGGCCGCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR GCA 72 bp AGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATaGACCGGGAGACCACCTGGGGGACATGTGGCCACC +
Preference number: 3 (lower is better)
Translates to: RSKGWLAQSHQL*TGRPPGGHVAT
Trigger: GGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR CCA 72 bp GACACAACGGTGGCGTCAGCCCCGAGAAGCAAGGGATaGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGA +
Preference number: 3 (lower is better)
Translates to: DTTVASAPRSKG*LAQSHQLCTGR
Trigger: TCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTGACGCCACCGTTGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR GCA 72 bp CCGGAAAGGAGGTGCAGAGGATGGGACACAGACCTCTaGACACACACAGGTGCGGCCATGCAACCAGGACGC +
Preference number: 3 (lower is better)
Translates to: PERRCRGWDTDL*THTGAAMQPGR
Trigger: GCGTCCTGGTTGCATGGCCGCACCTGTGTGTGTGCAGAGGTCTGTGTCCCATCCTCTGCACCTCCTTTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR GCA 72 bp CAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTaGAGAACAAACCACGGTAGTCCTCCTTCCACAGGG +
Preference number: 3 (lower is better)
Translates to: QLPGRDALSPGG*RTNHGSPPSTG
Trigger: CCCTGTGGAAGGAGGACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587379.1
ENST00000592231.5
3UTR CCA 72 bp GCCTCAAAGCCTCTGTGTTGGGCGGTCTGTGGACACTaGTACCGGGAGAGCTCCTACCGTGACAGGCTCCCA +
Preference number: 3 (lower is better)
Translates to: ASKPLCWAVCGH*YRESSYRDRLP
Trigger: TGGGAGCCTGTCACGGTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGCCCAACACAGAGGCTTTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR TCA 72 bp ACCTCTTCCTTTCTGAGGACAGGTAAGGCCAACAGATaGAGGGGTCCCGCTGAGGAAGCAGGGGAGGGCGGG +
Preference number: 3 (lower is better)
Translates to: TSSFLRTGKANR*RGPAEEAGEGG
Trigger: CCCGCCCTCCCCTGCTTCCTCAGCGGGACCCCTTCATCTGTTGGCCTTACCTGTCCTCAGAAAGGAAGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR GCA 72 bp ACATATTTCCCCCTGACTGAGCTGCTCAGACACAGCTaGCGCCACCACAGCCACCCGATCCTACCAAGCCGC +
Preference number: 3 (lower is better)
Translates to: TYFPLTELLRHS*RHHSHPILPSR
Trigger: GCGGCTTGGTAGGATCGGGTGGCTGTGGTGGCGGCAGCTGTGTCTGAGCAGCTCAGTCAGGGGGAAATATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590546.6
3UTR TCA 72 bp GGGGCACTGTTCGTGTGCTGGGAACACACAGGTCAATaGAGAGCAGCCAGAAAGCCCCAAGCTCTGGAGGCT +
Preference number: 3 (lower is better)
Translates to: GALFVCWEHTGQ*RAARKPQALEA
Trigger: AGCCTCCAGAGCTTGGGGCTTTCTGGCTGCTCTTCATTGACCTGTGTGTTCCCAGCACACGAACAGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000587010.5
ENST00000588130.5
ENST00000589225.5
ENST00000591052.5
3UTR GCA 72 bp GCCACCCTCGGGTATGAGTCCAACCTAGGAACCCAATaGATGGCATCTCGATGCGGCTGGCAAGAAGTCACC +
Preference number: 3 (lower is better)
Translates to: ATLGYESNLGTQ*MASRCGWQEVT
Trigger: GGTGACTTCTTGCCAGCCGCATCGAGATGCCATGCATTGGGTTCCTAGGTTGGACTCATACCCGAGGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR GCA 72 bp CAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTaGAGAACAAACCACGGTAGTCCTGACAGAGAGAAA +
Preference number: 3 (lower is better)
Translates to: QLPGRDALSPGG*RTNHGSPDREK
Trigger: TTTCTCTCTGTCAGGACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR CCA 72 bp AGGTTCCGATCTAGAGAAGCCTCAAAGCCTCTGTGTTaGGCGGTCTGTGGACACTGGTACCGGGAGAGCTCC +
Preference number: 3 (lower is better)
Translates to: RFRSREASKPLC*AVCGHWYRESS
Trigger: GGAGCTCTCCCGGTACCAGTGTCCACAGACCGCCCAACACAGAGGCTTTGAGGCTTCTCTAGATCGGAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR CAA 90 bp AGCTTCCCTGGTGGCAGCTGCGAGCATGCTCCTTGGAGAGCAGGTAGTTGGCTACACTGGATGGTGGCATaGAGAAAGCAGGTGTTGCCA +
Preference number: 3 (lower is better)
Translates to: SFPGGSCEHAPWRAGSWLHWMVA*RKQVLP
Trigger: TGGCAACACCTGCTTTCTCAATGCCACCATCCAGTG...TAGCCAACTACCTGCTCTCCAAGGAGCATGCTCGCAGCTGCCACCAGGGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
3UTR TCA 72 bp ACGAGACCCGAATCTTCCCACTGCCACCCTCGGGTATaGGTCCAACCTAGGAACCCAATGCATGGCATCTCG +
Preference number: 3 (lower is better)
Translates to: TRPESSHCHPRV*VQPRNPMHGIS
Trigger: CGAGATGCCATGCATTGGGTTCCTAGGTTGGACTCATACCCGAGGGTGGCAGTGGGAAGATTCGGGTCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR TCA 72 bp CTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTaGGAGCTACTCACAAGGAAGGGGTGCACAGTAGGG +
Preference number: 3 (lower is better)
Translates to: LRPQIASALQDS*ELLTRKGCTVG
Trigger: CCCTACTGTGCACCCCTTCCTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR TCA 72 bp CCCCTAAGAAGGTCTGCTAACATATTTCCCCCTGACTaGGCTGCTCAGACACAGCTGCCGCCACCACAGCCA +
Preference number: 3 (lower is better)
Translates to: PLRRSANIFPPD*AAQTQLPPPQP
Trigger: TGGCTGTGGTGGCGGCAGCTGTGTCTGAGCAGCTCAGTCAGGGGGAAATATGTTAGCAGACCTTCTTAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590546.6
3UTR GCA 72 bp GGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTaGAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCC +
Preference number: 3 (lower is better)
Translates to: GHLCSHTHCRFS*RAGRECHQRGS
Trigger: GGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR GCA 72 bp ACTCTCCTGATAGCCCCAACCAGGGGCAGCAGCCTCTaGCAGCACAGACCACTGTCTATGAAACATGAGAAG +
Preference number: 3 (lower is better)
Translates to: TLLIAPTRGSSL*QHRPLSMKHEK
Trigger: CTTCTCATGTTTCATAGACAGTGGTCTGTGCTGGCAGAGGCTGCTGCCCCTGGTTGGGGCTATCAGGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR CAA 90 bp CTCATCTTTCCCTTCCCTATCTGGTTGATGACTTCGGTGGAGGGAAGGGACGTGAAGTCCAACACCACGTaGTCCATCTCCACCTGCGAC +
Preference number: 3 (lower is better)
Translates to: LIFPFPIWLMTSVEGRDVKSNTT*SISTCD
Trigger: GTCGCAGGTGGAGATGGACAACGTGGTGTTGGACTT...CACGTCCCTTCCCTCCACCGAAGTCATCAACCAGATAGGGAAGGGAAAGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR TCA 72 bp CAGCCTCTGCCAGCACAGACCACTGTCTATGAAACATaGGAAGGCACAGCCTGGCAAAGATGTCCAGCAGGT +
Preference number: 3 (lower is better)
Translates to: QPLPAQTTVYET*EGTAWQRCPAG
Trigger: ACCTGCTGGACATCTTTGCCAGGCTGTGCCTTCTCATGTTTCATAGACAGTGGTCTGTGCTGGCAGAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR GCA 72 bp GAGTCCAACCTAGGAACCCAATGCATGGCATCTCGATaGGGCTGGCAAGAAGTCACCCTTCTGCAAGTGACT +
Preference number: 3 (lower is better)
Translates to: ESNLGTQCMASR*GWQEVTLLQVT
Trigger: AGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCATCGAGATGCCATGCATTGGGTTCCTAGGTTGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR GCA 72 bp GAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTaGGGGTTATTGCAGCTGCAAGGGAAGCTACAGCAC +
Preference number: 3 (lower is better)
Translates to: EFYPKASTSVKT*GLLQLQGKLQH
Trigger: GTGCTGTAGCTTCCCTTGCAGCTGCAATAACCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR GCA 72 bp GGAAGGGACGTGACTCCACCCAACAGTGATAAACGCTaGAGAAAGTCATCTCGTGCTCACCACTGCCCAAGA +
Preference number: 3 (lower is better)
Translates to: GRDVTPPNSDKR*RKSSRAHHCPR
Trigger: TCTTGGGCAGTGGTGAGCACGAGATGACTTTCTGCAGCGTTTATCACTGTTGGGTGGAGTCACGTCCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR CCA 72 bp AACCTAGGAACCCAATGCATGGCATCTCGATGCGGCTaGCAAGAAGTCACCCTTCTGCAAGTGACTGGGACA +
Preference number: 3 (lower is better)
Translates to: NLGTQCMASRCG*QEVTLLQVTGT
Trigger: TGTCCCAGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCATCGAGATGCCATGCATTGGGTTCCTAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR-3UTR CAA 90 bp CATGTGCTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCAAGACCTGCGGGTTATaGCAGCTGCAAGGGAAGCTA +
Preference number: 3 (lower is better)
Translates to: HVLSLPDKLQSQSTEARPKTCGL*QLQGKL
Trigger: TAGCTTCCCTTGCAGCTGCAATAACCCGCAGGTCTT...GGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR CAA 90 bp CCACCCAACAGTGATAAACGCTGCAGAAAGTCATCTCGTGCTCACCACTGCCCAGCCAGGCCCTCATCTTaGAACATTCAGAGACTGGTC +
Preference number: 3 (lower is better)
Translates to: PPNSDKRCRKSSRAHHCPARPSS*NIQRLV
Trigger: GACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGC...TGGGCAGTGGTGAGCACGAGATGACTTTCTGCAGCGTTTATCACTGTTGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR GCA 72 bp ATACACACAACCCACATCCCACACACACCCCACACATaGCCTTCTCCAAGTGACCAGAACACATGCCACAGA +
Preference number: 3 (lower is better)
Translates to: IHTTHIPHTPHT*PSPSDQNTCHR
Trigger: TCTGTGGCATGTGTTCTGGTCACTTGGAGAAGGGCATGTGTGGGGTGTGTGTGGGATGTGGGTTGTGTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR CCA 72 bp ATGCGGCTGGCAAGAAGTCACCCTTCTGCAAGTGACTaGGACACATGCCAGATATACACACAACCCACATCC +
Preference number: 3 (lower is better)
Translates to: MRLARSHPSASD*DTCQIYTQPTS
Trigger: GGATGTGGGTTGTGTGTATATCTGGCATGTGTCCCAGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
3UTR CCA 72 bp CTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTaGTCGGGAATGTCACCAAAGAGGTTCCGATCTAGA +
Preference number: 3 (lower is better)
Translates to: LLTHTLSFLLQG*SGMSPKRFRSR
Trigger: TCTAGATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR-3UTR CAA 90 bp AACACCCCGAGAAGAAAAGGAACATACCCTGCCCGTGAAGGCATGTGCTTTCCCTGCTCTCCAGGACAGTaGAGAGCTACTCACAAGGAA +
Preference number: 3 (lower is better)
Translates to: NTPRRKGTYPAREGMCFPCSPGQ*RATHKE
Trigger: TTCCTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCA...GGGAAAGCACATGCCTTCACGGGCAGGGTATGTTCCTTTTCTTCTCGGGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR GCA 72 bp TCAGCACCGCTTGATCATCCTGCCCGTGAAGGCATGTaGTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCA +
Preference number: 3 (lower is better)
Translates to: SAPLDHPAREGM*FPFQISYKARA
Trigger: TGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCACATGCCTTCACGGGCAGGATGATCAAGCGGTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589225.5
ENST00000591052.5
3UTR GCA 72 bp GGTCAACAGTGTCAAATCCCTGCCCGTGAAGGCATGTaGTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCA +
Preference number: 3 (lower is better)
Translates to: GQQCQIPAREGM*FPFQISYKARA
Trigger: TGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCACATGCCTTCACGGGCAGGGATTTGACACTGTTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587379.1
3UTR-3UTR CAA 90 bp CATGTGCTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCGTTCAGTGGGATGTATaGACTGGATCAGTTGATTCT +
Preference number: 3 (lower is better)
Translates to: HVLSLPDKLQSQSTEARPVQWDV*TGSVDS
Trigger: AGAATCAACTGATCCAGTCAATACATCCCACTGAAC...GGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587379.1
3UTR TCA 72 bp CAACACCCCGAGAAGAAAAGGAACATACCCTGCCCGTaGAGGCATGTGCTTTCCCTTCCAGATAAGTTACAA +
Preference number: 3 (lower is better)
Translates to: QHPEKKRNIPCP*RHVLSLPDKLQ
Trigger: TTGTAACTTATCTGGAAGGGAAAGCACATGCCTTCACGGGCAGGGTATGTTCCTTTTCTTCTCGGGGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR-3UTR CAA 90 bp CACAGGAGCTTGATTCTCTCCCACCCTTCTAAGAAGAGAAACGTAAAAACAGAAAAGACCTGCGGGTTATaGCAGCTGCAAGGGAAGCTA +
Preference number: 3 (lower is better)
Translates to: HRSLILSHPSKKRNVKTEKTCGL*QLQGKL
Trigger: TAGCTTCCCTTGCAGCTGCAATAACCCGCAGGTCTT...TTCTGTTTTTACGTTTCTCTTCTTAGAAGGGTGGGAGAGAATCAAGCTCCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR GCA 72 bp AGAAGAAAAGGAACATACCCTGCCCGTGAAGGCATGTaGTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCA +
Preference number: 3 (lower is better)
Translates to: RRKGTYPAREGM*FPFQISYKARA
Trigger: TGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCACATGCCTTCACGGGCAGGGTATGTTCCTTTTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR GCA 72 bp GATAAACGCTGCAGAAAGTCATCTCGTGCTCACCACTaGCCAAGAGTTAACGAATGTATGTACCCCAGGAAA +
Preference number: 3 (lower is better)
Translates to: DKRCRKSSRAHH*PRVNECMYPRK
Trigger: TTTCCTGGGGTACATACATTCGTTAACTCTTGGGCAGTGGTGAGCACGAGATGACTTTCTGCAGCGTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR-3UTR CAA 90 bp AGCAAACAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGACTCAAAGCCTCTGTGTaGGGCGGTCTGTGGACACTG +
Preference number: 3 (lower is better)
Translates to: SKQSHYLHIWERKHIANGLKASV*GGLWTL
Trigger: CAGTGTCCACAGACCGCCCAACACAGAGGCTTTGAG...TCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTGTTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR TCA 72 bp GAAGTCCTAAGCATTTCCTGCCTGTTTTCTTTGGTCTaGACCTATGAACTCAGGAATGACACAAAGACAATT +
Preference number: 3 (lower is better)
Translates to: EVLSISCLFSLV*TYELRNDTKTI
Trigger: AATTGTCTTTGTGTCATTCCTGAGTTCATAGGTTCAGACCAAAGAAAACAGGCAGGAAATGCTTAGGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
3UTR GCA 72 bp ACTGAGGCCAGTAGTTTTGCCATTTCAATCACTTATTaGCACAACTCAACTTCTCTAAAGAACATTCTAGGT +
Preference number: 3 (lower is better)
Translates to: TEASSFAISITY*HNSTSLKNILG
Trigger: ACCTAGAATGTTCTTTAGAGAAGTTGAGTTGTGGCAATAAGTGATTGAAATGGCAAAACTACTGGCCTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
3UTR TCA 72 bp TGTATTACCAACAGAAGACAATTTCCAAGCTATAAGTaGAAAAAGCAGTCAGAACGGTGGTATATAATACAG +
Preference number: 3 (lower is better)
Translates to: CITNRRQFPSYK*KKQSERWYIIQ
Trigger: CTGTATTATATACCACCGTTCTGACTGCTTTTTTCACTTATAGCTTGGAAATTGTCTTCTGTTGGTAATACA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587010.5
ENST00000588130.5
CDS-3UTR CCA 90 bp TGCCGCCACCACAGCCACCCGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTAAGCCTACGCAGCCCTaGCGACTCCTTCGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: CRHHSHPILPSRPGPAGRKPTQP*RLLRPA
Trigger: CGCGGGCCGAAGGAGTCGCCAGGGCTGCGTAGGCTT...ACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCGGGTGGCTGTGGTGGCGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp GGCGGGCTCGGACACAACGGTGGCGTCAGCCCCGAGAAGCAAGGGATGGCTTGCCCTGGCTCAGCCCCATaGGGTCCCCAGGACACCAGC +
Preference number: 4 (lower is better)
Translates to: GGLGHNGGVSPEKQGMACPGSAP*GPQDTS
Trigger: GCTGGTGTCCTGGGGACCGCATGGGGCTGAGCCAGG...GCAAGCCATCCCTTGCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGCCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGGCAGCTCCGTGGTTCTaGCGTCCCTGGGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RSRAHTESSLRSRPTAPGAAPWF*RPWGLG
Trigger: CCCAAGCCCCCAGGGACGTCAGAACCACGGAGCTGC...CCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCATGAAGGGGTCCCGCTaGGGAAGCAGGGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: PTQRAPSDPDRQLPGRDAMKGSR*GSRGGR
Trigger: CCGCCCTCCCCTGCTTCCTCAGCGGGACCCCTTCAT...GGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp CAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGAAGCCTACGCAGCCCTaGCGACTCCTTCGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: QGMACPEPPAMHRETTWGKPTQP*RLLRPA
Trigger: CGCGGGCCGAAGGAGTCGCCAGGGCTGCGTAGGCTT...CCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312010.10
CDS-3UTR TCA 90 bp GCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAGCAGCTCCGTGGTTCTaGCGTCCCTGGGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: AAEPTQRAPSDPDRQLPGAAPWF*RPWGLG
Trigger: CCCAAGCCCCCAGGGACGTCAGAACCACGGAGCTGC...TCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGGGAGAGCTCCTACCGTaGCAGGCTCCCAGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: RSRAHTESSLRSRPTAPGGELLP*QAPSAA
Trigger: TGCTGCGCTGGGAGCCTGTCACGGTAGGAGCTCTCC...CCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCAGGAAGCATCAGCCGAGTCCTTaGGGCCGGGTTTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PSRPGPAGRLRRQPFPRKHQPSP*GRVSGP
Trigger: AGGCCCTGAAACCCGGCCGCAAGGACTCGGCTGATG...CTTCCTGGGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp CGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGGCTCTGGGCTGGAGCTaGTGGAGCCCCTCCTGTCGA +
Preference number: 4 (lower is better)
Translates to: RSRAHTESSLRSRPTAPGALGWS*WSPSCR
Trigger: TCGACAGGAGGGGCTCCAGCAGCTCCAGCCCAGAGC...CCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp TCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGTCCTCCGCTTCCTGCTaGTCGCGTGGTGGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: SLRSRPTAPGKGRLVSRRSSASC*SRGGRP
Trigger: CGGACGGCCACCACGCGAGCAGCAGGAAGCGGAGGA...CCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGCCTGGCTCAGCCCCATaGGGTCCCCAGGACACCAGC +
Preference number: 4 (lower is better)
Translates to: LPQIQTDSSREGTPCLQEPGSAP*GPQDTS
Trigger: GCTGGTGTCCTGGGGACCGCATGGGGCTGAGCCAGG...CTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp AGGAAGCAGGGGAGGGCGGGCTCGGACACAACGGTGGCGTCAGCCCCGAGAAGCGATGTCCAGCAGGTGTaGGGCCACCTCTGCTCACAC +
Preference number: 4 (lower is better)
Translates to: RKQGRAGSDTTVASAPRSDVQQV*GHLCSH
Trigger: GTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATC...GCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGCCCGCCCTCCCCTGCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp CACCACAGCCACCCGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGCAGAAGCTTCCCTGGTaGCAGCTGCGAGCATGCTCC +
Preference number: 4 (lower is better)
Translates to: HHSHPILPSRPGPAGRLRQKLPW*QLRACS
Trigger: GGAGCATGCTCGCAGCTGCCACCAGGGAAGCTTCTG...CCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCGGGTGGCTGTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp AAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGAGCTGGCCGAGTGCTCTaGGCTGGAGCTGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: KGWLAQSHQLCTGRPPGGAGRVL*AGAAGA
Trigger: GGCTCCAGCAGCTCCAGCCCAGAGCACTCGGCCAGC...TCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGCCACTCCTGGGGGTCTaGGGGGCCTTGGTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: LPQIQTDSSREGTPCLQEPLLGV*GALVES
Trigger: CGACTCCACCAAGGCCCCCCAGACCCCCAGGAGTGG...CTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GCGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGCTCTTCCTCTTCCCGTaGGGAGCCGCAGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AQQSPHRELPQIQTDSSRLFLFP*GAAVAS
Trigger: GGAGGCCACTGCGGCTCCCCACGGGAAGAGGAAGAG...CCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGGAAGCAGGGGAGGGCGGGCTCGGACACAACGGTGGCGTCAGCCCCGAGAAGCGTGTTGGGCGGTCTGTaGACACTGGTACCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: RKQGRAGSDTTVASAPRSVLGGL*TLVPGE
Trigger: CTCTCCCGGTACCAGTGTCCACAGACCGCCCAACAC...GCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGCCCGCCCTCCCCTGCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp GGCGGGCTCGGACACAACGGTGGCGTCAGCCCCGAGAAGCAAGGGATGGCTTGCGCTCGGACACAACGGTaGCGTCAGCCCCGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: GGLGHNGGVSPEKQGMACARTQR*RQPREA
Trigger: TGCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGC...GCAAGCCATCCCTTGCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp CTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGATCTTGGCAACACGTaGGGCTCCCCAGGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: LPQIQTDSSREGTPCLQEDLGNT*GSPGPR
Trigger: CCGGGGGCCTGGGGAGCCCCACGTGTTGCCAAGATC...CTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR CCA 90 bp CGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCCTGGGAGGGTGGGTaGGGAAGCACGCACTTGGCA +
Preference number: 4 (lower is better)
Translates to: RSYQAAPDQQDVSGDSPFPWEGG*GSTHLA
Trigger: TGCCAAGTGCGTGCTTCCCCACCCACCCTCCCAGGG...GAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR TCA 90 bp GGTACCGGGAGAGCTCCTACCGTGACAGGCTCCCAGCGCAGCAGAGCCCACACAGTCAGCGGCGATAGCTaGGGCTGGCAGCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: GTGRAPTVTGSQRSRAHTVSGDS*GWQPLL
Trigger: CAGCAAAGGCTGCCAGCCTCAGCTATCGCCGCTGAC...TGTGTGGGCTCTGCTGCGCTGGGAGCCTGTCACGGTAGGAGCTCTCCCGGTACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp GAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGGAGAGCTCCTACCGTaGCAGGCTCCCAGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: ELPQIQTDSSREGTPCLQGELLP*QAPSAA
Trigger: TGCTGCGCTGGGAGCCTGTCACGGTAGGAGCTCTCC...CTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp AGGAAGCAGGGGAGGGCGGGCTCGGACACAACGGTGGCGTCAGCCCCGAGAAGCGGTAAGGCCAACAGATaGAGGGGTCCCGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: RKQGRAGSDTTVASAPRSGKANR*RGPAEE
Trigger: TTCCTCAGCGGGACCCCTTCATCTGTTGGCCTTACC...GCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGCCCGCCCTCCCCTGCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp AGCAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCCATCAGCCGAGTCCTTaGGGCCGGGTTTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SRCCQGCGVLRPRGRPAPHQPSP*GRVSGP
Trigger: AGGCCCTGAAACCCGGCCGCAAGGACTCGGCTGATG...GGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR GCA 90 bp ACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCAGGAAAAGGTTGTGGAGTCCTaGGCCCACGCGGAAGACCCG +
Preference number: 4 (lower is better)
Translates to: TKPPRTSRTSPETALSQEKVVES*AHAEDP
Trigger: CGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTT...TTCCTGGGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp AGGAAGCAGGGGAGGGCGGGCTCGGACACAACGGTGGCGTCAGCCCCGAGAAGCTGTCCGAGACGCTCTTaGACACGGAGCACTTCACGC +
Preference number: 4 (lower is better)
Translates to: RKQGRAGSDTTVASAPRSCPRRS*TRSTSR
Trigger: GCGTGAAGTGCTCCGTGTGCAAGAGCGTCTCGGACA...GCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGCCCGCCCTCCCCTGCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGGCTCTGGGCTGGAGCTaGTGGAGCCCCTCCTGTCGA +
Preference number: 4 (lower is better)
Translates to: LRSRPTAPGKGRLVSRRLALGWS*WSPSCR
Trigger: TCGACAGGAGGGGCTCCAGCAGCTCCAGCCCAGAGC...CAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp GCGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGTGGCCTCCCTGATGTaGTGTGGGAGGCGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: AQQSPHRELPQIQTDSSRVASLM*CGRRVS
Trigger: AGAGACGCGCCTCCCACAGCACATCAGGGAGGCCAC...CCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTCCTTCCACAGGGGCACACGGATGGTGCGCAGCTaGTGGACTCGGGGACAACAG +
Preference number: 4 (lower is better)
Translates to: QLPGRDALSPGGSFHRGTRMVRS*WTRGQQ
Trigger: CTGTTGTCCCCGAGTCCAGCAGCTGCGCACCATCCG...TGTGCCCCTGTGGAAGGAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR GCA 90 bp CAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGGCAGGAAGCAAAGCTaGCCCAGGGAGAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: QPREARDGLPRATSYAPGGRKQS*PRERGC
Trigger: GCACCCCCTCTCCCTGGGGCAGCTTTGCTTCCTGCC...TCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGGGCAGGAAGCAAAGCTaGCCCAGGGAGAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: LRSRPTAPGKGRLVSRRLGRKQS*PRERGC
Trigger: GCACCCCCTCTCCCTGGGGCAGCTTTGCTTCCTGCC...CAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp CACCACAGCCACCCGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGTGGGATGTGCAGACTTaGGCCTGCTGTCCTACTGCG +
Preference number: 4 (lower is better)
Translates to: HHSHPILPSRPGPAGRLRWDVQT*ACCPTA
Trigger: CGCAGTAGGACAGCAGGCCCAAGTCTGCACATCCCA...CCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCGGGTGGCTGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp GATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCACTGCCCTGTCTCCTaGCCGGTGGGTCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: DPTKPPRTSRTSPETALSHCPVS*PVGHLH
Trigger: GTGGAGATGACCCACCGGCCAGGAGACAGGGCAGTG...GGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp GCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCGTGTTGCCAAGGTTGTaGAGTCCTGCGCCCACGCGG +
Preference number: 4 (lower is better)
Translates to: AHTESSLRSRPTAPGKGRVLPRL*SPAPTR
Trigger: CCGCGTGGGCGCAGGACTCCACAACCTTGGCAACAC...GCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCGTGTTGCCAAGGTTGTaGAGTCCTGCGCCCACGCGG +
Preference number: 4 (lower is better)
Translates to: DPTKPPRTSRTSPETALSVLPRL*SPAPTR
Trigger: CCGCGTGGGCGCAGGACTCCACAACCTTGGCAACAC...GGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp AGCAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCGTGTTGCCAAGGTTGTaGAGTCCTGCGCCCACGCGG +
Preference number: 4 (lower is better)
Translates to: SRCCQGCGVLRPRGRPAPVLPRL*SPAPTR
Trigger: CCGCGTGGGCGCAGGACTCCACAACCTTGGCAACAC...GGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR CCA 90 bp CACCACAGCCACCCGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGATGCAGAAGCTTCCCTaGTGGCAGCTGCGAGCATGC +
Preference number: 4 (lower is better)
Translates to: HHSHPILPSRPGPAGRLRMQKLP*WQLRAC
Trigger: GCATGCTCGCAGCTGCCACCAGGGAAGCTTCTGCAT...CCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCGGGTGGCTGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp CAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAACTGGGCTGGAGCTGCTaGAGCCCCTCCTGTCGAGGC +
Preference number: 4 (lower is better)
Translates to: QQSPHRELPQIQTDSSRELGWSC*SPSCRG
Trigger: GCCTCGACAGGAGGGGCTCCAGCAGCTCCAGCCCAG...TTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGATGGTGGAGTCGCTGCTaGCCGAGTGCTCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KGWLAQSHQLCTGRPPGGWWSRC*PSALGW
Trigger: CCAGCCCAGAGCACTCGGCCAGCAGCGACTCCACCA...TCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGATGGTGGAGTCGCTGCTaGCCGAGTGCTCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AAEPTQRAPSDPDRQLPGWWSRC*PSALGW
Trigger: CCAGCCCAGAGCACTCGGCCAGCAGCGACTCCACCA...TCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GGCGTCAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACTGGTGGAGTCGCTGCTaGCCGAGTGCTCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GVSPEKQGMACPEPPAMHWWSRC*PSALGW
Trigger: CCAGCCCAGAGCACTCGGCCAGCAGCGACTCCACCA...GTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTGACGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GACGCGCCCACACCACACACACCACCCAACACACATGTGCCAGATACACAGCCCCCTCCTGCAGGGCGCTaGCAGCTGTGTCCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: DAPTPHTPPNTHVPDTQPPPAGR*QLCPPG
Trigger: GCCCGGAGGACACAGCTGCCAGCGCCCTGCAGGAGG...GGGCTGTGTATCTGGCACATGTGTGTTGGGTGGTGTGTGTGGTGTGGGCGCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp GATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCAGGTGTCCAAAGCCCTaGGAGGGTGGGTGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: DPTKPPRTSRTSPETALSRCPKP*EGGWGS
Trigger: GCTTCCCCACCCACCCTCCCAGGGCTTTGGACACCT...GGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR TCA 90 bp TGCCGCCACCACAGCCACCCGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTATCTTAACGGAGGGCTaGGTTTGGTTGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CRHHSHPILPSRPGPAGRILTEG*VWLGRC
Trigger: GCACCTGCCCAACCAAACTCAGCCCTCCGTTAAGAT...ACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCGGGTGGCTGTGGTGGCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR TCA 90 bp GGCGGGCTCGGACACAACGGTGGCGTCAGCCCCGAGAAGCAAGGGATGGCTTGCAGCCTGTCCTGGAGATaGGGCCCTCGGGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: GGLGHNGGVSPEKQGMACSLSWR*GPRDFS
Trigger: AGAAAAGTCCCGAGGGCCTCATCTCCAGGACAGGCT...GCAAGCCATCCCTTGCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAGCAGCTCCGTGGTTCTaGCGTCCCTGGGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RPPLLTHTLSFLLQGWSGAAPWF*RPWGLG
Trigger: CCCAAGCCCCCAGGGACGTCAGAACCACGGAGCTGC...TCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp GAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGAGGTCCTCGTTGACCTaGGGCAGCGCCGTCGAGATG +
Preference number: 4 (lower is better)
Translates to: ELPQIQTDSSREGTPCLQRSSLT*GSAVEM
Trigger: CATCTCGACGGCGCTGCCTCAGGTCAACGAGGACCT...CTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGGTCAGCGGCGATAGCTaGGGCTGGCAGCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: QSPHRELPQIQTDSSREGVSGDS*GWQPLL
Trigger: CAGCAAAGGCTGCCAGCCTCAGCTATCGCCGCTGAC...CCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000587010.5
ENST00000587379.1
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp TCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACGTCAGCGGCGATAGCTaGGGCTGGCAGCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SRPTAPGKGRLVSRRLQNVSGDS*GWQPLL
Trigger: CAGCAAAGGCTGCCAGCCTCAGCTATCGCCGCTGAC...GTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000587379.1
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp CGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGAAGGGGTCCCGCTaGGGAAGCAGGGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: RPPLLTHTLSFLLQGWSGMKGSR*GSRGGR
Trigger: CCGCCCTCCCCTGCTTCCTCAGCGGGACCCCTTCAT...TCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp GCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGACAGGAGAGGGCACCCTaGGCAGCTCCACTCACTGCT +
Preference number: 4 (lower is better)
Translates to: AAEPTQRAPSDPDRQLPGQERAP*AAPLTA
Trigger: AGCAGTGAGTGGAGCTGCTCAGGGTGCCCTCTCCTG...TCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542802.7
ENST00000587379.1
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp ACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCACTCAGGAGAGGGCACCCTaGGCAGCTCCACTCACTGCT +
Preference number: 4 (lower is better)
Translates to: TSYAPGDHLGDMWPPSPTQERAP*AAPLTA
Trigger: AGCAGTGAGTGGAGCTGCTCAGGGTGCCCTCTCCTG...AGTGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGGTGCAGACTTGGGCCTaGTGTCCTACTGCGGCATGG +
Preference number: 4 (lower is better)
Translates to: RSRAHTESSLRSRPTAPGVQTWA*CPTAAW
Trigger: CCATGCCGCAGTAGGACAGCAGGCCCAAGTCTGCAC...CCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp GCGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGTGCAGACTTGGGCCTaGTGTCCTACTGCGGCATGG +
Preference number: 4 (lower is better)
Translates to: AQQSPHRELPQIQTDSSRVQTWA*CPTAAW
Trigger: CCATGCCGCAGTAGGACAGCAGGCCCAAGTCTGCAC...CCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp GATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGCATCAGCCGAGTCCTTaGGGCCGGGTTTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: DGLPRATSYAPGDHLGDMHQPSP*GRVSGP
Trigger: AGGCCCTGAAACCCGGCCGCAAGGACTCGGCTGATG...CATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp GATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCATACGTGTGCTCACTaGCCTGTCTCCTGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: DPTKPPRTSRTSPETALSHTCAH*PVSWPV
Trigger: CACCGGCCAGGAGACAGGGCAGTGAGCACACGTATG...GGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp CACCACAGCCACCCGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGCAGCTCTCATACGTGTaGTCACTGCCCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: HHSHPILPSRPGPAGRLRQLSYV*SLPCLL
Trigger: CAGGAGACAGGGCAGTGAGCACACGTATGAGAGCTG...CCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCGGGTGGCTGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp GCGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGATGTCCAGCAGGTGTaGGGCCACCTCTGCTCACAC +
Preference number: 4 (lower is better)
Translates to: AQQSPHRELPQIQTDSSRDVQQV*GHLCSH
Trigger: GTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATC...CCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp AAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACAGAGCCACCAGCTATaGACCGGGAGACCACCTGGG +
Preference number: 4 (lower is better)
Translates to: KGWLAQSHQLCTGRPPGGQSHQL*TGRPPG
Trigger: CCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTG...TCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGACAGAGCCACCAGCTATaGACCGGGAGACCACCTGGG +
Preference number: 4 (lower is better)
Translates to: QPREARDGLPRATSYAPGQSHQL*TGRPPG
Trigger: CCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTG...TCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCACTCAGCAGCTCCACTCACTaGTGCTGGGACACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PAMHRETTWGTCGHHPPLSSSTH*CWDTGG
Trigger: GCCACCTGTGTCCCAGCAGCAGTGAGTGGAGCTGCT...GAGTGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCACCTGGGAGAGGTAGCTaGTGTACACAGGCCCCACTC +
Preference number: 4 (lower is better)
Translates to: PPAMHRETTWGTCGHHPPPGRGS*CTQAPL
Trigger: GAGTGGGGCCTGTGTACAGCAGCTACCTCTCCCAGG...TGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR GCA 90 bp ACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCAGGAAGCCTGGGTAGAAAGGTaGCGGGCTGGCTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: TKPPRTSRTSPETALSQEAWVER*RAGCCH
Trigger: ATGGCAACAGCCAGCCCGGCACCTTTCTACCCAGGC...TTCCTGGGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp CAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCACAGGGCTGAGTTTGGTTaGGCAGGTGCTACGCGGAGC +
Preference number: 4 (lower is better)
Translates to: QVLPRLWSPAPTRKTRSHRAEFG*AGATRS
Trigger: GCTCCGCGTAGCACCTGCCCAACCAAACTCAGCCCT...GTGGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR CCA 90 bp AGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGCACTGCCCTGTCTCCTaGCCGGTGGGTCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: SPEKQGMACPEPPAMHREHCPVS*PVGHLH
Trigger: GTGGAGATGACCCACCGGCCAGGAGACAGGGCAGTG...CTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCCACTTTCTGCGGGGCTaGGACTCCGTCACCACAGCT +
Preference number: 4 (lower is better)
Translates to: PTQRAPSDPDRQLPGRDAHFLRG*DSVTTA
Trigger: AGCTGTGGTGACGGAGTCCCAGCCCCGCAGAAAGTG...GGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CACCACAGCCACCCGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGGAGACAGTCGCTCCGTaGGGAAAAGCACTTTCTGCG +
Preference number: 4 (lower is better)
Translates to: HHSHPILPSRPGPAGRLRETVAP*GKALSA
Trigger: CGCAGAAAGTGCTTTTCCCCACGGAGCGACTGTCTC...CCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCGGGTGGCTGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp CCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCAGGAAGGGCAGGCTTTCTGCATaGCGTCGATGGTGTACCGCA +
Preference number: 4 (lower is better)
Translates to: PSRPGPAGRLRRQPFPRKGRLSA*RRWCTA
Trigger: TGCGGTACACCATCGACGCCATGCAGAAAGCCTGCC...CTTCCTGGGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp GCGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGCAGGTGACACAGCCCTaGCTCTATGGACGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: AQQSPHRELPQIQTDSSRQVTQP*LYGRAK
Trigger: CTTGGCCCGTCCATAGAGCCAGGGCTGTGTCACCTG...CCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGAGGAAATGACGCCTCCTGCAGGGCGCTaGCAGCTGTGTCCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: VQHHVVHLHLRRLREEMTPPAGR*QLCPPG
Trigger: GCCCGGAGGACACAGCTGCCAGCGCCCTGCAGGAGG...CGTCATTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGCACCGGGAGACCACCTaGGGGACATGTGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: QSPHRELPQIQTDSSREGHRETT*GTCGHH
Trigger: ATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTG...CCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp CCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCACCGAGAAGCAAGGGATaGCTTGCCCAGAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: PPAMHRETTWGTCGHHPPPRSKG*LAQSHQ
Trigger: CTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGG...TGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp CGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGTCCACTCACTGCTGCTaGGACACAGGTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: RSRAHTESSLRSRPTAPGSTHCC*DTGGHR
Trigger: CCTGTGGCCACCTGTGTCCCAGCAGCAGTGAGTGGA...CCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542802.7
ENST00000587379.1
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp AGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACTCCACTCACTGCTGCTaGGACACAGGTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: RDGLPRATSYAPGDHLGDSTHCC*DTGGHR
Trigger: CCTGTGGCCACCTGTGTCCCAGCAGCAGTGAGTGGA...GTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp ACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCAGGAAGGGGAAGCACGCACTTaGCACAGCCATTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TKPPRTSRTSPETALSQEGEART*HSHSGR
Trigger: CCTGCCTGAATGGCTGTGCCAAGTGCGTGCTTCCCC...TTCCTGGGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR TCA 90 bp GGCGGGCTCGGACACAACGGTGGCGTCAGCCCCGAGAAGCAAGGGATGGCTTGCGCAGCCTTTGCTGGGTaGGTCACAGACCAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: GGLGHNGGVSPEKQGMACAAFAG*VTDQKF
Trigger: GAACTTCTGGTCTGTGACTCACCCAGCAAAGGCTGC...GCAAGCCATCCCTTGCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp ACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCCGCCCACGTTCTCCCTaGGCGTCCCGGCTGCGCCCG +
Preference number: 4 (lower is better)
Translates to: TVVSLAGLVGNVTKEVPIRPRSP*ASRLRP
Trigger: CGGGCGCAGCCGGGACGCTCAGGGAGAACGTGGGCG...GATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR GCA 90 bp GCGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGGCCTGCTGTCCTACTaGGGCATGGAACCAGGATCT +
Preference number: 4 (lower is better)
Translates to: AQQSPHRELPQIQTDSSRGLLSY*GMEPGS
Trigger: AGATCCTGGTTCCATGCCGCAGTAGGACAGCAGGCC...CCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp ACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCAGGAAGGCCTGCTGTCCTACTaGGGCATGGAACCAGGATCT +
Preference number: 4 (lower is better)
Translates to: TKPPRTSRTSPETALSQEGLLSY*GMEPGS
Trigger: AGATCCTGGTTCCATGCCGCAGTAGGACAGCAGGCC...TTCCTGGGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp AGCAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCGGCCTGCTGTCCTACTaGGGCATGGAACCAGGATCT +
Preference number: 4 (lower is better)
Translates to: SRCCQGCGVLRPRGRPAPGLLSY*GMEPGS
Trigger: AGATCCTGGTTCCATGCCGCAGTAGGACAGCAGGCC...GGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR GCA 90 bp GCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGCATACGTGTGCTCACTaGCCTGTCTCCTGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: AEPTQRAPSDPDRQLPGRHTCAH*PVSWPV
Trigger: CACCGGCCAGGAGACAGGGCAGTGAGCACACGTATG...CCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp ACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCAGGAAGGGAAAAGCACTTTCTaGGGGGCTGGGACTCCGTCA +
Preference number: 4 (lower is better)
Translates to: TKPPRTSRTSPETALSQEGKSTF*GAGTPS
Trigger: TGACGGAGTCCCAGCCCCGCAGAAAGTGCTTTTCCC...TTCCTGGGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp CAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCACGGGAAAAGCACTTTCTaGGGGGCTGGGACTCCGTCA +
Preference number: 4 (lower is better)
Translates to: QVLPRLWSPAPTRKTRSHGKSTF*GAGTPS
Trigger: TGACGGAGTCCCAGCCCCGCAGAAAGTGCTTTTCCC...GTGGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR GCA 90 bp CGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACAAGGTTGTGGAGTCCTaGGCCCACGCGGAAGACCCG +
Preference number: 4 (lower is better)
Translates to: RQLPGRDALSPGGCRTNHKVVES*AHAEDP
Trigger: CGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTT...GTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp CAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGTTCCCTGGTGGCAGCTaGGAGCATGCTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: QGMACPEPPAMHRETTWGFPGGS*EHAPWR
Trigger: TCTCCAAGGAGCATGCTCGCAGCTGCCACCAGGGAA...CCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCTTCCCTGGTGGCAGCTaGGAGCATGCTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: RSYQAAPDQQDVSGDSPFFPGGS*EHAPWR
Trigger: TCTCCAAGGAGCATGCTCGCAGCTGCCACCAGGGAA...GAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp AGCAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCTTCCCTGGTGGCAGCTaGGAGCATGCTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SRCCQGCGVLRPRGRPAPFPGGS*EHAPWR
Trigger: TCTCCAAGGAGCATGCTCGCAGCTGCCACCAGGGAA...GGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR GCA 90 bp TGCCGCCACCACAGCCACCCGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTTTCAGGCAGGCTTTCTaGATGGCGTCGATGGTGTAC +
Preference number: 4 (lower is better)
Translates to: CRHHSHPILPSRPGPAGRFRQAF*MASMVY
Trigger: GTACACCATCGACGCCATGCAGAAAGCCTGCCTGAA...ACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCGGGTGGCTGTGGTGGCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp GCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCTCGCCCTCCACAGGGTaGTGGCCTTCTTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: AHTESSLRSRPTAPGKGRSPSTG*WPSWQK
Trigger: TTTCTGCCAAGAAGGCCAGCACCCTGTGGAGGGCGA...GCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCATCGCCCTCCACAGGGTaGTGGCCTTCTTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PPAMHRETTWGTCGHHPPSPSTG*WPSWQK
Trigger: TTTCTGCCAAGAAGGCCAGCACCCTGTGGAGGGCGA...TGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp GACGCGCCCACACCACACACACCACCCAACACACATGTGCCAGATACACAGCCCGTGGACGGAGGTCATTaGCGGTCGCCCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: DAPTPHTPPNTHVPDTQPVDGGH*RSPSTG
Trigger: CCCTGTGGAGGGCGACCGGCAATGACCTCCGTCCAC...GGGCTGTGTATCTGGCACATGTGTGTTGGGTGGTGTGTGTGGTGTGGGCGCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp CTCTGTGTTGGGCGGTCTGTGGACACTGGTACCGGGAGAGCTCCTACCGTGACAGGCTGTCTCTGTGTCTaGCCCTCCTGCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: LCVGRSVDTGTGRAPTVTGCLCV*PSCRAL
Trigger: CAGCGCCCTGCAGGAGGGGCAGACACAGAGACAGCC...TGTCACGGTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGCCCAACACAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp ACAGCAGCCTGGAAAGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCTCCTCCGCTTCCTGCTaGTCGCGTGGTGGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: TAAWKADVFAGIEGSSDPSSASC*SRGGRP
Trigger: CGGACGGCCACCACGCGAGCAGCAGGAAGCGGAGGA...GGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCTTTCCAGGCTGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp TTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACGAAGTGGGTCCTGGTaGAGGCCGCCTTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: LPRATSYAPGDHLGDMWPRSGSW*RPPSSP
Trigger: TGGTGAAGAAGGCGGCCTGCACCAGGACCCACTTCG...TGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAATGGGAGAGCAGCTGTaGCGAAGTGGGTCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: QPREARDGLPRATSYAPGMGEQL*RSGSWC
Trigger: GCACCAGGACCCACTTCGGCACAGCTGCTCTCCCAT...TCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAACGGATGGTGCGCAGCTaGTGGACTCGGGGACAACAG +
Preference number: 4 (lower is better)
Translates to: QTDSSREGTPCLQEAAEQRMVRS*WTRGQQ
Trigger: CTGTTGTCCCCGAGTCCAGCAGCTGCGCACCATCCG...TTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp AGCAGCCAGAAAGCCCCAAGCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCCTGGCTCAGCCCCATaGGGTCCCCAGGACACCAGC +
Preference number: 4 (lower is better)
Translates to: SSQKAPSSGGFHSRESAPPGSAP*GPQDTS
Trigger: GCTGGTGTCCTGGGGACCGCATGGGGCTGAGCCAGG...CGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGCTTGGGGCTTTCTGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp AAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGAAGCTCCACTCACTGCTaGTGGGACACAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: KGWLAQSHQLCTGRPPGGSSTHC*WDTGGH
Trigger: GTGGCCACCTGTGTCCCAGCAGCAGTGAGTGGAGCT...TCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCAGGAAGCCCAGAGGCAAATTCTaGCACGTCTACCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PSRPGPAGRLRRQPFPRKPRGKF*HVYPRA
Trigger: TGCCCTTGGGTAGACGTGGCAGAATTTGCCTCTGGG...CTTCCTGGGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp CAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCACTGGGATGTGCAGACTTaGGCCTGCTGTCCTACTGCG +
Preference number: 4 (lower is better)
Translates to: QVLPRLWSPAPTRKTRSHWDVQT*ACCPTA
Trigger: CGCAGTAGGACAGCAGGCCCAAGTCTGCACATCCCA...GTGGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR CCA 90 bp GATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCTGTCTCCTGGCCGGTaGGTCATCTCCACTCTTGTG +
Preference number: 4 (lower is better)
Translates to: DPTKPPRTSRTSPETALSLSPGR*VISTLV
Trigger: CACAAGAGTGGAGATGACCCACCGGCCAGGAGACAG...GGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp AGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGCACTTTCTGCGGGGCTaGGACTCCGTCACCACAGCT +
Preference number: 4 (lower is better)
Translates to: SPEKQGMACPEPPAMHREHFLRG*DSVTTA
Trigger: AGCTGTGGTGACGGAGTCCCAGCCCCGCAGAAAGTG...CTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGCAGAAGCTTCCCTGGTaGCAGCTGCGAGCATGCTCC +
Preference number: 4 (lower is better)
Translates to: ELPQIQTDSSREGTPCLQQKLPW*QLRACS
Trigger: GGAGCATGCTCGCAGCTGCCACCAGGGAAGCTTCTG...CTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGTGGCGTTGCCGCTGTTaGCGAAGGCCTGGACAATGT +
Preference number: 4 (lower is better)
Translates to: QGMACPEPPAMHRETTWGWRCRC*RRPGQC
Trigger: ACATTGTCCAGGCCTTCGCCAACAGCGGCAACGCCA...CCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCTGGCGTTGCCGCTGTTaGCGAAGGCCTGGACAATGT +
Preference number: 4 (lower is better)
Translates to: DPTKPPRTSRTSPETALSWRCRC*RRPGQC
Trigger: ACATTGTCCAGGCCTTCGCCAACAGCGGCAACGCCA...GGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp CACCACAGCCACCCGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGTCTGCATGGCGTCGATaGTGTACCGCAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: HHSHPILPSRPGPAGRLRSAWRR*CTAGTH
Trigger: ATGAGTTCCTGCGGTACACCATCGACGCCATGCAGA...CCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCGGGTGGCTGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp CAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTCTGGGCTGGAGCTGCTaGAGCCCCTCCTGTCGAGGC +
Preference number: 4 (lower is better)
Translates to: QVCGHLCSHTHCRFSCRALGWSC*SPSCRG
Trigger: GCCTCGACAGGAGGGGCTCCAGCAGCTCCAGCCCAG...AGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGCACTTGGCGGCGTTTTaGAGTGGCCAGCGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: LPQIQTDSSREGTPCLQEHLAAF*SGQRWN
Trigger: GTTCCACCGCTGGCCACTCCAAAACGCCGCCAAGTG...CTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GGCGTCAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCACTTGGCGGCGTTTTaGAGTGGCCAGCGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: GVSPEKQGMACPEPPAMHHLAAF*SGQRWN
Trigger: GTTCCACCGCTGGCCACTCCAAAACGCCGCCAAGTG...GTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTGACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGCAGGTGACACAGCCCTaGCTCTATGGACGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LPQIQTDSSREGTPCLQEQVTQP*LYGRAK
Trigger: CTTGGCCCGTCCATAGAGCCAGGGCTGTGTCACCTG...CTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGAAGGCGGCTGGATGATTaGGGAGCAGGTGACACAGCC +
Preference number: 4 (lower is better)
Translates to: KGWLAQSHQLCTGRPPGGRRLDD*GAGDTA
Trigger: GGCTGTGTCACCTGCTCCCCAATCATCCAGCCGCCT...TCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGACGTCCCTGGGGGCTTaGGGGTACTGGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: SLRSRPTAPGKGRLVSRRTSLGA*GYWTAM
Trigger: CATTGCTGTCCAGTACCCCCAAGCCCCCAGGGACGT...CCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCGGGCTCACTGGCCTCTaGCAACTGGTGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: PTQRAPSDPDRQLPGRDAGLTGL*QLVWKR
Trigger: TCTCTTCCACACCAGTTGCCAGAGGCCAGTGAGCCC...GGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CTCTGTGTTGGGCGGTCTGTGGACACTGGTACCGGGAGAGCTCCTACCGTGACACTCTTCCTCTTCCCGTaGGGAGCCGCAGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LCVGRSVDTGTGRAPTVTLFLFP*GAAVAS
Trigger: GGAGGCCACTGCGGCTCCCCACGGGAAGAGGAAGAG...TGTCACGGTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGCCCAACACAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GCGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGTTCCTGCTGCTCGCGTaGTGGCCGTCCGTAACACAT +
Preference number: 4 (lower is better)
Translates to: AQQSPHRELPQIQTDSSRFLLLA*WPSVTH
Trigger: ATGTGTTACGGACGGCCACCACGCGAGCAGCAGGAA...CCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGTGCCGAAGTGGGTCCTaGTGCAGGCCGCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: AEPTQRAPSDPDRQLPGRCRSGS*CRPPSS
Trigger: TGAAGAAGGCGGCCTGCACCAGGACCCACTTCGGCA...CCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGGTGTTGGGCGGTCTGTaGACACTGGTACCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: QSPHRELPQIQTDSSREGVLGGL*TLVPGE
Trigger: CTCTCCCGGTACCAGTGTCCACAGACCGCCCAACAC...CCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp GAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGTGTTGGGCGGTCTGTaGACACTGGTACCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: ELPQIQTDSSREGTPCLQVLGGL*TLVPGE
Trigger: CTCTCCCGGTACCAGTGTCCACAGACCGCCCAACAC...CTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp AGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGCACCGGGAGACCACCTaGGGGACATGTGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: SRAHTESSLRSRPTAPGKHRETT*GTCGHH
Trigger: ATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTG...CTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp CAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGGGAGAGGTGGCTGGGTaGGGTCACCTCTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: QGMACPEPPAMHRETTWGGEVAG*GHLFLS
Trigger: AGAAAGGAAGAGGTGACCCCACCCAGCCACCTCTCC...CCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp GCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCATCTTAACGGAGGGCTaGGTTTGGTTGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: AHTESSLRSRPTAPGKGRILTEG*VWLGRC
Trigger: GCACCTGCCCAACCAAACTCAGCCCTCCGTTAAGAT...GCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CACCACAGCCACCCGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGCAATGTGGTTCTGCATaGCACACAGCATGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: HHSHPILPSRPGPAGRLRQCGSA*HTACRS
Trigger: GCTTCTGCATGCTGTGTGTCATGCAGAACCACATTG...CCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCGGGTGGCTGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR TCA 90 bp CTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGTGCCACCCTCGGGTATaGGTCCAACCTAGGAACCCA +
Preference number: 4 (lower is better)
Translates to: LRSRPTAPGKGRLVSRRLCHPRV*VQPRNP
Trigger: TGGGTTCCTAGGTTGGACTCATACCCGAGGGTGGCA...CAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR TCA 90 bp GCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAGGTAAGGCCAACAGATaGAGGGGTCCCGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: AAEPTQRAPSDPDRQLPGGKANR*RGPAEE
Trigger: TTCCTCAGCGGGACCCCTTCATCTGTTGGCCTTACC...TCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp TGCCGCCACCACAGCCACCCGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTTGGGCTCCAACAGTTTaGGTACCCAGAGGCAAATTC +
Preference number: 4 (lower is better)
Translates to: CRHHSHPILPSRPGPAGRWAPTV*VPRGKF
Trigger: GAATTTGCCTCTGGGTACTCAAACTGTTGGAGCCCA...ACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCGGGTGGCTGTGGTGGCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp AGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACGTTTGGTTGGGCAGGTaGTACGCGGAGCTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: RDGLPRATSYAPGDHLGDVWLGR*YAELLN
Trigger: ATTCAGGAGCTCCGCGTAGCACCTGCCCAACCAAAC...GTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp ACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCAGGAATGCATCACTGGGATGTaGAGACTTGGGCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: TKPPRTSRTSPETALSQECITGM*RLGPAV
Trigger: GACAGCAGGCCCAAGTCTGCACATCCCAGTGATGCA...TTCCTGGGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp CAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCACTGCATCACTGGGATGTaGAGACTTGGGCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: QVLPRLWSPAPTRKTRSHCITGM*RLGPAV
Trigger: GACAGCAGGCCCAAGTCTGCACATCCCAGTGATGCA...GTGGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR GCA 90 bp ACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCAGGAAGGTAGGAGAAGCTCTTaGTGGCTGGCTCGAACTCGA +
Preference number: 4 (lower is better)
Translates to: TKPPRTSRTSPETALSQEGRRSS*WLARTR
Trigger: TCGAGTTCGAGCCAGCCAGCAAGAGCTTCTCCTACC...TTCCTGGGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp AGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGGGGAAAAGCACTTTCTaGGGGGCTGGGACTCCGTCA +
Preference number: 4 (lower is better)
Translates to: SPEKQGMACPEPPAMHREGKSTF*GAGTPS
Trigger: TGACGGAGTCCCAGCCCCGCAGAAAGTGCTTTTCCC...CTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp GCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGTTCCCTGGTGGCAGCTaGGAGCATGCTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: AEPTQRAPSDPDRQLPGRFPGGS*EHAPWR
Trigger: TCTCCAAGGAGCATGCTCGCAGCTGCCACCAGGGAA...CCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp AGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGTACCGCAGGAACTCATaGGCGTCCTCCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SPEKQGMACPEPPAMHREYRRNS*ASSWFP
Trigger: TGGGAACCAGGAGGACGCGCATGAGTTCCTGCGGTA...CTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp ACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTGTGTGCCATCTTCCTaGCGTCTGACAGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TESSLRSRPTAPGKGRLVCVPSS*RLTAGS
Trigger: GCTGCCCGCTGTCAGACGGCAGGAAGATGGCACACA...GACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGCCATTCGCGGATGGTaGGCAGCTGCTGGACTCGGG +
Preference number: 4 (lower is better)
Translates to: QVCGHLCSHTHCRFSCRAAIRGW*AAAGLG
Trigger: CCCGAGTCCAGCAGCTGCGCACCATCCGCGAATGGC...AGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp GCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCTTGATCATCCTGCCCGTGGCCATTCGCGGATGGTaGGCAGCTGCTGGACTCGGG +
Preference number: 4 (lower is better)
Translates to: ALEASTLVNQHRLIILPVAIRGW*AAAGLG
Trigger: CCCGAGTCCAGCAGCTGCGCACCATCCGCGAATGGC...CACGGGCAGGATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp GGCGGGCTCGGACACAACGGTGGCGTCAGCCCCGAGAAGCAAGGGATGGCTTGCAACACATGCCACAGATaGCAGGTGTACACACCCCAC +
Preference number: 4 (lower is better)
Translates to: GGLGHNGGVSPEKQGMACNTCHR*QVYTPH
Trigger: GTGGGGTGTGTACACCTGGCATCTGTGGCATGTGTT...GCAAGCCATCCCTTGCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp CCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTGCATGGCATCTCGATaGGGCTGGCAAGAAGTCACC +
Preference number: 4 (lower is better)
Translates to: PTQRAPSDPDRQLPGRDACMASR*GWQEVT
Trigger: GGTGACTTCTTGCCAGCCGCATCGAGATGCCATGCA...GGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp CTCTGTGTTGGGCGGTCTGTGGACACTGGTACCGGGAGAGCTCCTACCGTGACACAGAGCCACCAGCTATaGACCGGGAGACCACCTGGG +
Preference number: 4 (lower is better)
Translates to: LCVGRSVDTGTGRAPTVTQSHQL*TGRPPG
Trigger: CCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTG...TGTCACGGTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGCCCAACACAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp GGTACCGGGAGAGCTCCTACCGTGACAGGCTCCCAGCGCAGCAGAGCCCACACATTGTCCATCTCCACCTaGGACGACTCCGGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GTGRAPTVTGSQRSRAHTLSIST*DDSGRK
Trigger: TTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAA...TGTGTGGGCTCTGCTGCGCTGGGAGCCTGTCACGGTAGGAGCTCTCCCGGTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCACTCTTGTCCATCTCCACCTaGGACGACTCCGGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PAMHRETTWGTCGHHPPLLSIST*DDSGRK
Trigger: TTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAA...GAGTGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAAGCTCCACTCACTGCTaGTGGGACACAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: QTDSSREGTPCLQEAAEQSSTHC*WDTGGH
Trigger: GTGGCCACCTGTGTCCCAGCAGCAGTGAGTGGAGCT...TTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587379.1
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACAGCAGCTCCACTCACTaGTGCTGGGACACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RQLPGRDALSPGGCRTNHSSSTH*CWDTGG
Trigger: GCCACCTGTGTCCCAGCAGCAGTGAGTGGAGCTGCT...GTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587379.1
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCACCATACGTGTGCTCACTaGCTTCTTGGCAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: QVLPRLWSPAPTRKTRSHHTCAH*LLGRGG
Trigger: GCCTCCTCTGCCAAGAAGGCAGTGAGCACACGTATG...GTGGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR CCA 90 bp TTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCATGGGATGTGCAGACTTaGGCCTGCTGTCCTACTGCG +
Preference number: 4 (lower is better)
Translates to: LPRATSYAPGDHLGDMWPWDVQT*ACCPTA
Trigger: CGCAGTAGGACAGCAGGCCCAAGTCTGCACATCCCA...TGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGGAAGCAGGGGAGGGCGGGCTCGGACACAACGGTGGCGTCAGCCCCGAGAAGCTCATCTCCACTCTTGTaGCGACTAGCTCCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: RKQGRAGSDTTVASAPRSSSPLL*RLAPSV
Trigger: AACAGAGGGAGCTAGTCGCCACAAGAGTGGAGATGA...GCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGCCCGCCCTCCCCTGCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGTCTCCTGGCCGGTaGGTCATCTCCACTCTTGTG +
Preference number: 4 (lower is better)
Translates to: SLRSRPTAPGKGRLVSRRLSPGR*VISTLV
Trigger: CACAAGAGTGGAGATGACCCACCGGCCAGGAGACAG...CCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGCAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCGAGACAGTCGCTCCGTaGGGAAAAGCACTTTCTGCG +
Preference number: 4 (lower is better)
Translates to: SRCCQGCGVLRPRGRPAPETVAP*GKALSA
Trigger: CGCAGAAAGTGCTTTTCCCCACGGAGCGACTGTCTC...GGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR CCA 90 bp CAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGTCATGCGCGTCCTCCTaGTTCCCAAAGCGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: QGMACPEPPAMHRETTWGSCASS*FPKRKC
Trigger: ACACTTCCGCTTTGGGAACCAGGAGGACGCGCATGA...CCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGGCAGGCTTTCTGCATaGCGTCGATGGTGTACCGCA +
Preference number: 4 (lower is better)
Translates to: QPREARDGLPRATSYAPGGRLSA*RRWCTA
Trigger: TGCGGTACACCATCGACGCCATGCAGAAAGCCTGCC...TCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGGAAGCAGGGGAGGGCGGGCTCGGACACAACGGTGGCGTCAGCCCCGAGAAGCCACCAATCTCTTCAGTaGTGTGCGGCTTCTTCATCG +
Preference number: 4 (lower is better)
Translates to: RKQGRAGSDTTVASAPRSHQSLQ*CAASSS
Trigger: CGATGAAGAAGCCGCACACCACTGAAGAGATTGGTG...GCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGCCCGCCCTCCCCTGCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAACCCCGAGGGCAGCTTTaGAGGAATGCAGCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: QQSPHRELPQIQTDSSREPRGQL*RNAAVL
Trigger: CAGAACGGCTGCATTCCTCCAAAGCTGCCCTCGGGG...TTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCATGGAGTGGCCAGCGGTaGAACAGTTCGTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PPAMHRETTWGTCGHHPPWSGQR*NSSFPE
Trigger: CTCAGGAAACGAACTGTTCCACCGCTGGCCACTCCA...TGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGTGCTTGCAGGCTCAGTaGTGGTGTTGCTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: RSRAHTESSLRSRPTAPGCLQAQ*WCCSGQ
Trigger: CTGTCCTGAGCAACACCACCACTGAGCCTGCAAGCA...CCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAAGGCGGCTGGATGATTaGGGAGCAGGTGACACAGCC +
Preference number: 4 (lower is better)
Translates to: QTDSSREGTPCLQEAAEQRRLDD*GAGDTA
Trigger: GGCTGTGTCACCTGCTCCCCAATCATCCAGCCGCCT...TTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp AGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGAGGCGGCTGGATGATTaGGGAGCAGGTGACACAGCC +
Preference number: 4 (lower is better)
Translates to: SRAHTESSLRSRPTAPGKRRLDD*GAGDTA
Trigger: GGCTGTGTCACCTGCTCCCCAATCATCCAGCCGCCT...CTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAACCTCCCTCCTGTACATaGGGCTCCCAGGCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: QTDSSREGTPCLQEAAEQPPSCT*GSQAVS
Trigger: AGAGACAGCCTGGGAGCCCCATGTACAGGAGGGAGG...TTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGTTCCTGCTGCTCGCGTaGTGGCCGTCCGTAACACAT +
Preference number: 4 (lower is better)
Translates to: QSPHRELPQIQTDSSREGFLLLA*WPSVTH
Trigger: ATGTGTTACGGACGGCCACCACGCGAGCAGCAGGAA...CCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGAGAGGGCAGCTGTGCCGAAGTaGGTCCTGGTGCAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HGSQALIFEHSETGPQERAAVPK*VLVQAA
Trigger: GGCGGCCTGCACCAGGACCCACTTCGGCACAGCTGC...CCTCTCCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TCTAGAGAAGCCTCAAAGCCTCTGTGTTGGGCGGTCTGTGGACACTGGTACCGGGCAGCTGTGCCGAAGTaGGTCCTGGTGCAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SREASKPLCWAVCGHWYRAAVPK*VLVQAA
Trigger: GGCGGCCTGCACCAGGACCCACTTCGGCACAGCTGC...CCGGTACCAGTGTCCACAGACCGCCCAACACAGAGGCTTTGAGGCTTCTCTAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CGTCAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGGACAACAGCATCTTaGGGCTTGGCACTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: RQPREARDGLPRATSYAPGTTAS*GLALLG
Trigger: CCCAAGGAGTGCCAAGCCCCAAGATGCTGTTGTCCC...CGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GGCGTCAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACATGGTGCGCAGCTGCTaGACTCGGGGACAACAGCAT +
Preference number: 4 (lower is better)
Translates to: GVSPEKQGMACPEPPAMHMVRSC*TRGQQH
Trigger: ATGCTGTTGTCCCCGAGTCCAGCAGCTGCGCACCAT...GTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTGACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGACCAGCCATTCGCGGATaGTGCGCAGCTGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: RPPLLTHTLSFLLQGWSGPAIRG*CAAAGL
Trigger: GAGTCCAGCAGCTGCGCACCATCCGCGAATGGCTGG...TCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCGCATCTCGATGCGGCTaGCAAGAAGTCACCCTTCTG +
Preference number: 4 (lower is better)
Translates to: AHTESSLRSRPTAPGKGRASRCG*QEVTLL
Trigger: CAGAAGGGTGACTTCTTGCCAGCCGCATCGAGATGC...GCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGCGGTCTGTGGACACTaGTACCGGGAGAGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: QQSPHRELPQIQTDSSREAVCGH*YRESSY
Trigger: GTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGC...TTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp TTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCAAAAGGGAGAGGTGGCTaGGTGGGGTCACCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LPRATSYAPGDHLGDMWPKGRGG*VGSPLP
Trigger: AGGAAGAGGTGACCCCACCCAGCCACCTCTCCCTTT...TGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp CTCTGTGTTGGGCGGTCTGTGGACACTGGTACCGGGAGAGCTCCTACCGTGACAGGAATACCCGGGCTCTaGAGAAGCGAGCTCGCGAGC +
Preference number: 4 (lower is better)
Translates to: LCVGRSVDTGTGRAPTVTGIPGL*RSELAS
Trigger: GCTCGCGAGCTCGCTTCTCCAGAGCCCGGGTATTCC...TGTCACGGTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGCCCAACACAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR TCA 90 bp CCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCGTAGTAGCCTGCGTTTaGCGATCCAACTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: PTQRAPSDPDRQLPGRDAVVACV*RSNLAQ
Trigger: CTGTGCCAAGTTGGATCGTCAAACGCAGGCTACTAC...GGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGGGAGCACTTCACGCGTaGTCTGAGATACCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: QGMACPEPPAMHRETTWGGALHA*SEIPSK
Trigger: TTTGGAGGGTATCTCAGATCACGCGTGAAGTGCTCC...CCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp ACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCAGCCTGTCCTGGAGATaGGGCCCTCGGGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: TESSLRSRPTAPGKGRLVSLSWR*GPRDFS
Trigger: AGAAAAGTCCCGAGGGCCTCATCTCCAGGACAGGCT...GACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp AGCAGCCAGAAAGCCCCAAGCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGGTCAGCGGCGATAGCTaGGGCTGGCAGCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SSQKAPSSGGFHSRESAPVSGDS*GWQPLL
Trigger: CAGCAAAGGCTGCCAGCCTCAGCTATCGCCGCTGAC...CGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGCTTGGGGCTTTCTGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587010.5
ENST00000588130.5
ENST00000589225.5
ENST00000591052.5
CDS-3UTR TCA 90 bp CCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCAGCTCTCCAGGACAGTTaGGAGCTACTCACAAGGAAG +
Preference number: 4 (lower is better)
Translates to: PPAMHRETTWGTCGHHPPALQDS*ELLTRK
Trigger: CTTCCTTGTGAGTAGCTCTCAACTGTCCTGGAGAGC...TGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp CACACACACCCCCACCTCACCCTTACACCCACCCCCTCGGAACCGACCTCCTTCAAGCCTCCACCTCAGTaGAGACCTGCGGGTTATTGC +
Preference number: 4 (lower is better)
Translates to: HTHPHLTLTPTPSEPTSFKPPPQ*RPAGYC
Trigger: GCAATAACCCGCAGGTCTTCACTGAGGTGGAGGCTT...GAAGGAGGTCGGTTCCGAGGGGGTGGGTGTAAGGGTGAGGTGGGGGTGTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR TCA 90 bp TCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGGAGCCTCTCCGAAGTTaGCCTGAATCCTGCACAGAC +
Preference number: 4 (lower is better)
Translates to: SLRSRPTAPGKGRLVSRREPLRS*PESCTD
Trigger: GTCTGTGCAGGATTCAGGTCAACTTCGGAGAGGCTC...CCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR TCA 90 bp TCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACCCAGCAGAGCCACACTaGAGGAGGTCTAAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: SRPTAPGKGRLVSRRLQNPAEPH*RRSKSN
Trigger: GTTGGACTTAGACCTCCTTCAGTGTGGCTCTGCTGG...GTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp GCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCCAGGCCCTCATCTTTaGACATTCAGAGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: AHTESSLRSRPTAPGKGRPGPHL*TFRDWS
Trigger: GGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGG...GCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542802.7
ENST00000587379.1
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp GGTACCGGGAGAGCTCCTACCGTGACAGGCTCCCAGCGCAGCAGAGCCCACACACCAGGCCCTCATCTTTaGACATTCAGAGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: GTGRAPTVTGSQRSRAHTPGPHL*TFRDWS
Trigger: GGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGG...TGTGTGGGCTCTGCTGCGCTGGGAGCCTGTCACGGTAGGAGCTCTCCCGGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp GGTACCGGGAGAGCTCCTACCGTGACAGGCTCCCAGCGCAGCAGAGCCCACACAAACATACCCTGCCCGTaGAGGCATGTGCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: GTGRAPTVTGSQRSRAHTNIPCP*RHVLSL
Trigger: AAGGGAAAGCACATGCCTTCACGGGCAGGGTATGTT...TGTGTGGGCTCTGCTGCGCTGGGAGCCTGTCACGGTAGGAGCTCTCCCGGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR TCA 90 bp CGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCATATTTCCCCCTGACTaGGCTGCTCAGACACAGCTG +
Preference number: 4 (lower is better)
Translates to: RSYQAAPDQQDVSGDSPFIFPPD*AAQTQL
Trigger: CAGCTGTGTCTGAGCAGCTCAGTCAGGGGGAAATAT...GAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp CAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGCCTGCTGTCCTACTaGGGCATGGAACCAGGATCT +
Preference number: 4 (lower is better)
Translates to: QQSPHRELPQIQTDSSREGLLSY*GMEPGS
Trigger: AGATCCTGGTTCCATGCCGCAGTAGGACAGCAGGCC...TTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp TCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGGGTAGGAGAAGCTCTTaGTGGCTGGCTCGAACTCGA +
Preference number: 4 (lower is better)
Translates to: SLRSRPTAPGKGRLVSRRGRRSS*WLARTR
Trigger: TCGAGTTCGAGCCAGCCAGCAAGAGCTTCTCCTACC...CCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp AGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGGGTAGGAGAAGCTCTTaGTGGCTGGCTCGAACTCGA +
Preference number: 4 (lower is better)
Translates to: SPEKQGMACPEPPAMHREGRRSS*WLARTR
Trigger: TCGAGTTCGAGCCAGCCAGCAAGAGCTTCTCCTACC...CTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp AGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGCAGCTCTCATACGTGTaGTCACTGCCCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SPEKQGMACPEPPAMHREQLSYV*SLPCLL
Trigger: CAGGAGACAGGGCAGTGAGCACACGTATGAGAGCTG...CTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp GCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCTTGATCATCCTGCCCGTGAAGGTTGTGGAGTCCTaGGCCCACGCGGAAGACCCG +
Preference number: 4 (lower is better)
Translates to: ALEASTLVNQHRLIILPVKVVES*AHAEDP
Trigger: CGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTT...CACGGGCAGGATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp CAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGTTCAGGCAGGCTTTCTaGATGGCGTCGATGGTGTAC +
Preference number: 4 (lower is better)
Translates to: QGMACPEPPAMHRETTWGFRQAF*MASMVY
Trigger: GTACACCATCGACGCCATGCAGAAAGCCTGCCTGAA...CCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp GCGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGCAGCTTTGGAGGAATaGAGCCGTTCTGGGACTTCA +
Preference number: 4 (lower is better)
Translates to: AQQSPHRELPQIQTDSSRAALEE*SRSGTS
Trigger: TGAAGTCCCAGAACGGCTGCATTCCTCCAAAGCTGC...CCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGGCTCCCAGATCTGCTaGTATTCGAGTTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QPREARDGLPRATSYAPGGSQIC*YSSCWS
Trigger: GGACCAGCAACTCGAATAGCAGCAGATCTGGGAGCC...TCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp GCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATTCGCTGCTGGCCGAGTaGTCTGGGCTGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ATSAHTHTVVSLAGLVGNSLLAE*SGLELL
Trigger: CAGCAGCTCCAGCCCAGAGCACTCGGCCAGCAGCGA...ATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp AGGGCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTTCGCTGCTGGCCGAGTaGTCTGGGCTGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RAPPTPNSLCSPGQLRATSLLAE*SGLELL
Trigger: CAGCAGCTCCAGCCCAGAGCACTCGGCCAGCAGCGA...AGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp GCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACGTGGACGGAGGTCATTaGCGGTCGCCCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: APPTPNSLCSPGQLRATHVDGGH*RSPSTG
Trigger: CCCTGTGGAGGGCGACCGGCAATGACCTCCGTCCAC...GTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp GCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCAACACATGCCACAGATaGCAGGTGTACACACCCCAC +
Preference number: 4 (lower is better)
Translates to: AHTESSLRSRPTAPGKGRNTCHR*QVYTPH
Trigger: GTGGGGTGTGTACACCTGGCATCTGTGGCATGTGTT...GCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp CCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCAAACCTAGGAACCCAATaGATGGCATCTCGATGCGGC +
Preference number: 4 (lower is better)
Translates to: PPAMHRETTWGTCGHHPPNLGTQ*MASRCG
Trigger: GCCGCATCGAGATGCCATGCATTGGGTTCCTAGGTT...TGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp CCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCCACTGTCGTTTCTCTTaGAGGGCTGGTCGGGAATGT +
Preference number: 4 (lower is better)
Translates to: PTQRAPSDPDRQLPGRDAHCRFS*RAGREC
Trigger: ACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTG...GGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGCACTGTCGTTTCTCTTaGAGGGCTGGTCGGGAATGT +
Preference number: 4 (lower is better)
Translates to: QGMACPEPPAMHRETTWGHCRFS*RAGREC
Trigger: ACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTG...CCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACCTCACAAGGAAGGGGTaGACAGTAGGGCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: RQLPGRDALSPGGCRTNHLTRKG*TVGPPS
Trigger: AGAGGGTGGCCCTACTGTGCACCCCTTCCTTGTGAG...GTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCACTCGCGGGTTATTGCAGCTaGAAGGGAAGCTACAGCACA +
Preference number: 4 (lower is better)
Translates to: PAMHRETTWGTCGHHPPLAGYCS*KGSYST
Trigger: TGTGCTGTAGCTTCCCTTGCAGCTGCAATAACCCGC...GAGTGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp GCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGGCAGGAAGCAAAGCTaGCCCAGGGAGAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: ATSAHTHTVVSLAGLVGNGRKQS*PRERGC
Trigger: GCACCCCCTCTCCCTGGGGCAGCTTTGCTTCCTGCC...ATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CACAGGTGCGGCCATGCAACCAGGACGCGGGGCAGGCAAGTGAGAGGACCTGGGGCCCGTGAAGGCATGTaGTTTCCCTTCCAGATAAGT +
Preference number: 4 (lower is better)
Translates to: HRCGHATRTRGRQVRGPGAREGM*FPFQIS
Trigger: ACTTATCTGGAAGGGAAAGCACATGCCTTCACGGGC...CCCAGGTCCTCTCACTTGCCTGCCCCGCGTCCTGGTTGCATGGCCGCACCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR GCA 90 bp AGCAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCCAGCTCTCATACGTGTaGTCACTGCCTTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SRCCQGCGVLRPRGRPAPQLSYV*SLPSWQ
Trigger: CTGCCAAGAAGGCAGTGAGCACACGTATGAGAGCTG...GGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR CCA 90 bp GTTGTCCATCTCCACCTGCGACGACTCCGGGAGGAAATGACGGGGACAGACCCGGGCATGGTGCATCACTaGGATGTGCAGACTTGGGCC +
Preference number: 4 (lower is better)
Translates to: VVHLHLRRLREEMTGTDPGMVHH*DVQTWA
Trigger: GGCCCAAGTCTGCACATCCCAGTGATGCACCATGCC...CGGGTCTGTCCCCGTCATTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCAGGAAGAGGAGAAGCTCTTGCTaGCTGGCTCGAACTCGATTT +
Preference number: 4 (lower is better)
Translates to: PSRPGPAGRLRRQPFPRKRRSSC*LARTRF
Trigger: AAATCGAGTTCGAGCCAGCCAGCAAGAGCTTCTCCT...CTTCCTGGGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp GGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAACACTGCCCTGTCTCCTaGCCGGTGGGTCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: GHLCSHTHCRFSCRAGREHCPVS*PVGHLH
Trigger: GTGGAGATGACCCACCGGCCAGGAGACAGGGCAGTG...TTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGACAGTCGCTCCGTaGGGAAAAGCACTTTCTGCG +
Preference number: 4 (lower is better)
Translates to: ELPQIQTDSSREGTPCLQETVAP*GKALSA
Trigger: CGCAGAAAGTGCTTTTCCCCACGGAGCGACTGTCTC...CTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCACTCTGCGAGCATGCTCCTTaGAGAGCAGGTAGTTGGCTA +
Preference number: 4 (lower is better)
Translates to: PAMHRETTWGTCGHHPPLCEHAP*RAGSWL
Trigger: TAGCCAACTACCTGCTCTCCAAGGAGCATGCTCGCA...GAGTGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACTGCGAGCATGCTCCTTaGAGAGCAGGTAGTTGGCTA +
Preference number: 4 (lower is better)
Translates to: RDGLPRATSYAPGDHLGDCEHAP*RAGSWL
Trigger: TAGCCAACTACCTGCTCTCCAAGGAGCATGCTCGCA...GTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGCAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCTGCGAGCATGCTCCTTaGAGAGCAGGTAGTTGGCTA +
Preference number: 4 (lower is better)
Translates to: SRCCQGCGVLRPRGRPAPCEHAP*RAGSWL
Trigger: TAGCCAACTACCTGCTCTCCAAGGAGCATGCTCGCA...GGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR CCA 90 bp CAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAATGCAGAAGCTTCCCTaGTGGCAGCTGCGAGCATGC +
Preference number: 4 (lower is better)
Translates to: QQSPHRELPQIQTDSSREMQKLP*WQLRAC
Trigger: GCATGCTCGCAGCTGCCACCAGGGAAGCTTCTGCAT...TTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAGGCAGGCTTTCTGCATaGCGTCGATGGTGTACCGCA +
Preference number: 4 (lower is better)
Translates to: QTDSSREGTPCLQEAAEQGRLSA*RRWCTA
Trigger: TGCGGTACACCATCGACGCCATGCAGAAAGCCTGCC...TTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp GCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAACTTCAGGCCCAGGGTaGAGCCATTCCTGGATATGG +
Preference number: 4 (lower is better)
Translates to: AAEPTQRAPSDPDRQLPGTSGPG*SHSWIW
Trigger: CCATATCCAGGAATGGCTCCACCCTGGGCCTGAAGT...TCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AAGAGCAGCCAGAAAGCCCCAAGCTCTGGAGGCTTCCACTCTCGTGAATCAGCAGCTGGCCGAGTGCTCTaGGCTGGAGCTGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: KSSQKAPSSGGFHSRESAAGRVL*AGAAGA
Trigger: GGCTCCAGCAGCTCCAGCCCAGAGCACTCGGCCAGC...TGCTGATTCACGAGAGTGGAAGCCTCCAGAGCTTGGGGCTTTCTGGCTGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp CGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAGGCGGCGTTTTGGAGTaGCCAGCGGTGGAACAGTTC +
Preference number: 4 (lower is better)
Translates to: RPPLLTHTLSFLLQGWSGGGVLE*PAVEQF
Trigger: GAACTGTTCCACCGCTGGCCACTCCAAAACGCCGCC...TCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGAGAATCTGCTCCACTTaGCGGCGTTTTGGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: ELPQIQTDSSREGTPCLQRICST*RRFGVA
Trigger: GGCCACTCCAAAACGCCGCCAAGTGGAGCAGATTCT...CTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGATGCTTGCAGGCTCAGTaGTGGTGTTGCTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: AAEPTQRAPSDPDRQLPGCLQAQ*WCCSGQ
Trigger: CTGTCCTGAGCAACACCACCACTGAGCCTGCAAGCA...TCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGCTTGCAGGCTCAGTaGTGGTGTTGCTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: DGLPRATSYAPGDHLGDMCLQAQ*WCCSGQ
Trigger: CTGTCCTGAGCAACACCACCACTGAGCCTGCAAGCA...CATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCCCCTCCACAGGGTGCTaGCCTTCTTGGCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SREGTPCLQEAAEQTTVVPSTGC*PSWQKG
Trigger: CCCTTTCTGCCAAGAAGGCCAGCACCCTGTGGAGGG...GACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp GAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGTTTTCATGGGGTaGGTGAGGTCGGAGGATGGT +
Preference number: 4 (lower is better)
Translates to: ELPQIQTDSSREGTPCLQEVFMG*VRSEDG
Trigger: ACCATCCTCCGACCTCACCCACCCCATGAAAACCTC...CTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAACGTCCCTGGGGGCTTaGGGGTACTGGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: RPPLLTHTLSFLLQGWSGTSLGA*GYWTAM
Trigger: CATTGCTGTCCAGTACCCCCAAGCCCCCAGGGACGT...TCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGCAGCGCCGTCGAGATaGAGGAGCAGCTCCGTGGTT +
Preference number: 4 (lower is better)
Translates to: QVCGHLCSHTHCRFSCRAAAPSR*RSSSVV
Trigger: AACCACGGAGCTGCTCCTCCATCTCGACGGCGCTGC...AGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp ACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCCCTCCTGCAGGGCGCTaGCAGCTGTGTCCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: TVVSLAGLVGNVTKEVPIPPAGR*QLCPPG
Trigger: GCCCGGAGGACACAGCTGCCAGCGCCCTGCAGGAGG...GATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAACACATCCCACCTGCTaGCCATTCACCTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: AAEPTQRAPSDPDRQLPGTHPTC*PFTCGC
Trigger: ACAGCCACAGGTGAATGGCCAGCAGGTGGGATGTGT...TCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTTGCCGAAGTGGGTCCTaGTGCAGGCCGCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LPGRDALSPGGCRTNHGSCRSGS*CRPPSS
Trigger: TGAAGAAGGCGGCCTGCACCAGGACCCACTTCGGCA...ACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp GAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGGGCTTGGCACTCCTTaGGCATTTGAGATGCCCATC +
Preference number: 4 (lower is better)
Translates to: ELPQIQTDSSREGTPCLQGLGTP*AFEMPI
Trigger: GATGGGCATCTCAAATGCCCAAGGAGTGCCAAGCCC...CTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGCATCTCGATGCGGCTaGCAAGAAGTCACCCTTCTG +
Preference number: 4 (lower is better)
Translates to: AEPTQRAPSDPDRQLPGRASRCG*QEVTLL
Trigger: CAGAAGGGTGACTTCTTGCCAGCCGCATCGAGATGC...CCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp GGCGTCAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACTCAAAGCCTCTGTGTTaGGCGGTCTGTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: GVSPEKQGMACPEPPAMHSKPLC*AVCGHW
Trigger: CCAGTGTCCACAGACCGCCCAACACAGAGGCTTTGA...GTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTGACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp ACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCGGAGAGGTGGCTGGGTaGGGTCACCTCTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: TESSLRSRPTAPGKGRLVGEVAG*GHLFLS
Trigger: AGAAAGGAAGAGGTGACCCCACCCAGCCACCTCTCC...GACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp AGCAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCTGCTCACTGCCTTCTTaGCAGAGGAGGCAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: SRCCQGCGVLRPRGRPAPCSLPS*QRRQEA
Trigger: AGCTTCTTGCCTCCTCTGCCAAGAAGGCAGTGAGCA...GGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
3UTR CAA 72 bp GCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCTaGATCATCGTGACAGGCTCCCAGCGCAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: ALEASTLVNQHR*IIVTGSQRSRA
Trigger: GGCTCTGCTGCGCTGGGAGCCTGTCACGATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587010.5
3UTR CAA 72 bp TGGATGGTGGCATTGAGAAAGCAGGTGTTGCCAAGGTaGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCC +
Preference number: 4 (lower is better)
Translates to: WMVALRKQVLPR*WSPAPTRKTRS
Trigger: GGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTGCTTTCTCAATGCCACCATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR TCA 90 bp CGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCACTGGATGGTGGCATTaGGAAAGCAGGTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: RSYQAAPDQQDVSGDSPFTGWWH*ESRCCQ
Trigger: TTGGCAACACCTGCTTTCTCAATGCCACCATCCAGT...GAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR TCA 90 bp CAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCACACTGGATGGTGGCATTaGGAAAGCAGGTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: QVLPRLWSPAPTRKTRSHTGWWH*ESRCCQ
Trigger: TTGGCAACACCTGCTTTCTCAATGCCACCATCCAGT...GTGGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR TCA 90 bp TTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCAATGTTCTGTGGATGGTaGAGCGCTTGCTGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LPRATSYAPGDHLGDMWPMFCGW*SACWLE
Trigger: TTCCAGCCAGCAAGCGCTTCACCATCCACAGAACAT...TGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp ACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCACTATGTTCTGTGGATGGTaGAGCGCTTGCTGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: TSYAPGDHLGDMWPPSPTMFCGW*SACWLE
Trigger: TTCCAGCCAGCAAGCGCTTCACCATCCACAGAACAT...AGTGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp TCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGATGTTCTGTGGATGGTaGAGCGCTTGCTGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SLRSRPTAPGKGRLVSRRMFCGW*SACWLE
Trigger: TTCCAGCCAGCAAGCGCTTCACCATCCACAGAACAT...CCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGGAACAGTTCGTTTCCTaGGAATCGCAGAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: QSPHRELPQIQTDSSREGEQFVS*ESQRWA
Trigger: GGCCCATCTCTGCGATTCTCAGGAAACGAACTGTTC...CCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp GTCCTGACAGAGAGAAACGAGACCCGAATCTTCCCACTGCCACCCTCGGGTATGCATCTTCCTGCCGTCTaGCAGCGGGCAGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: VLTERNETRIFPLPPSGMHLPAV*QRAAVP
Trigger: AGGCACAGCTGCCCGCTGTCAGACGGCAGGAAGATG...CATACCCGAGGGTGGCAGTGGGAAGATTCGGGTCTCGTTTCTCTCTGTCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR TCA 90 bp GCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATCATCTTCCTGCCGTCTaGCAGCGGGCAGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: ATSAHTHTVVSLAGLVGNHLPAV*QRAAVP
Trigger: AGGCACAGCTGCCCGCTGTCAGACGGCAGGAAGATG...ATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp ACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCGCAGCCTTTGCTGGGTaGGTCACAGACCAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: TESSLRSRPTAPGKGRLVAAFAG*VTDQKF
Trigger: GAACTTCTGGTCTGTGACTCACCCAGCAAAGGCTGC...GACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000587010.5
ENST00000587379.1
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp CAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGGTCAGCGGCGATAGCTaGGGCTGGCAGCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: QSTEARPSSLNIQRLVRRVSGDS*GWQPLL
Trigger: CAGCAAAGGCTGCCAGCCTCAGCTATCGCCGCTGAC...CCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000542802.7
ENST00000587379.1
ENST00000589225.5
ENST00000591052.5
ENST00000592231.5
CDS-3UTR TCA 90 bp GATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTGTCAGCGGCGATAGCTaGGGCTGGCAGCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: DVQQVCGHLCSHTHCRFSVSGDS*GWQPLL
Trigger: CAGCAAAGGCTGCCAGCCTCAGCTATCGCCGCTGAC...AGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp GTTGTCCATCTCCACCTGCGACGACTCCGGGAGGAAATGACGGGGACAGACCCGAAGCCTCCACCTCAGTaGAGACCTGCGGGTTATTGC +
Preference number: 4 (lower is better)
Translates to: VVHLHLRRLREEMTGTDPKPPPQ*RPAGYC
Trigger: GCAATAACCCGCAGGTCTTCACTGAGGTGGAGGCTT...CGGGTCTGTCCCCGTCATTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp GTTGTCCATCTCCACCTGCGACGACTCCGGGAGGAAATGACGGGGACAGACCCGTCTCCGAAGTTGACCTaGATCCTGCACAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: VVHLHLRRLREEMTGTDPSPKLT*ILHRQR
Trigger: CCGCTGTCTGTGCAGGATTCAGGTCAACTTCGGAGA...CGGGTCTGTCCCCGTCATTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR TCA 90 bp GTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGAGGAAATGACGCGGGGACAGACCCGATaGGGAAGGATGTTCACGGTC +
Preference number: 4 (lower is better)
Translates to: VQHHVVHLHLRRLREEMTRGQTR*GRMFTV
Trigger: GACCGTGAACATCCTTCCTCATCGGGTCTGTCCCCG...CGTCATTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp AGCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCTTGATCATCCTGCCCGTCAGGAGAGGGCACCCTaGGCAGCTCCACTCACTGCT +
Preference number: 4 (lower is better)
Translates to: SSGGFHSRESAPLDHPARQERAP*AAPLTA
Trigger: AGCAGTGAGTGGAGCTGCTCAGGGTGCCCTCTCCTG...ACGGGCAGGATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589225.5
ENST00000591052.5
CDS-3UTR TCA 90 bp AAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACCAGGCCCTCATCTTTaGACATTCAGAGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: KGWLAQSHQLCTGRPPGGPGPHL*TFRDWS
Trigger: GGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGG...TCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp GCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGTCAAATCCCTGCCCGTaGAGGCATGTGCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: AEPTQRAPSDPDRQLPGRSNPCP*RHVLSL
Trigger: AAGGGAAAGCACATGCCTTCACGGGCAGGGATTTGA...CCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587379.1
CDS-3UTR GCA 90 bp AGCTTCCCTGGTGGCAGCTGCGAGCATGCTCCTTGGAGAGCAGGTAGTTGGCTAGTGCAGACTTGGGCCTaGTGTCCTACTGCGGCATGG +
Preference number: 4 (lower is better)
Translates to: SFPGGSCEHAPWRAGSWLVQTWA*CPTAAW
Trigger: CCATGCCGCAGTAGGACAGCAGGCCCAAGTCTGCAC...TAGCCAACTACCTGCTCTCCAAGGAGCATGCTCGCAGCTGCCACCAGGGAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR GCA 90 bp AGCAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCCCACTATTGGCATGGTaGATCACTGGGATGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SRCCQGCGVLRPRGRPAPPLLAW*ITGMCR
Trigger: TCTGCACATCCCAGTGATGCACCATGCCAATAGTGG...GGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR GCA 90 bp AGCAGCCAGAAAGCCCCAAGCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCATACGTGTGCTCACTaGCCTGTCTCCTGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: SSQKAPSSGGFHSRESAPHTCAH*PVSWPV
Trigger: CACCGGCCAGGAGACAGGGCAGTGAGCACACGTATG...CGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGCTTGGGGCTTTCTGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp CTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTTTCCCCTTCAGCCCATaGCCGTTGGCAGTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: LPGRDALSPGGCRTNHGSFPFSP*PLAVAV
Trigger: TACAGCCACTGCCAACGGGCATGGGCTGAAGGGGAA...ACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp AGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATAGCCTCTGCTTCGCTGCTGGCCGAGTaGTCTGGGCTGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SRCIRRYRGLLRPQIASASLLAE*SGLELL
Trigger: CAGCAGCTCCAGCCCAGAGCACTCGGCCAGCAGCGA...AGCAGAGGCTATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCACACCGTCTTAGAATCTaGTCCACTTGGCGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: PPAMHRETTWGTCGHHPPHRLRI*STWRRF
Trigger: AAAACGCCGCCAAGTGGAGCAGATTCTAAGACGGTG...TGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp ACAGCAGCCTGGAAAGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCATGGGAGAGCAGCTGTaGCGAAGTGGGTCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TAAWKADVFAGIEGSSDPMGEQL*RSGSWC
Trigger: GCACCAGGACCCACTTCGGCACAGCTGCTCTCCCAT...GGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCTTTCCAGGCTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp AGGAGGTCTAAGTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGAGGGGCAGCAGCCTCTaGCAGCACAGACCACTGTCT +
Preference number: 4 (lower is better)
Translates to: RRSKSNTTLSISTCDDSGRGSSL*QHRPLS
Trigger: AGACAGTGGTCTGTGCTGGCAGAGGCTGCTGCCCCT...CCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGACTTAGACCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGCGGGTTATTGCAGCTaGAAGGGAAGCTACAGCACA +
Preference number: 4 (lower is better)
Translates to: QPREARDGLPRATSYAPGAGYCS*KGSYST
Trigger: TGTGCTGTAGCTTCCCTTGCAGCTGCAATAACCCGC...TCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp GATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGGCGGGTTATTGCAGCTaGAAGGGAAGCTACAGCACA +
Preference number: 4 (lower is better)
Translates to: DGLPRATSYAPGDHLGDMAGYCS*KGSYST
Trigger: TGTGCTGTAGCTTCCCTTGCAGCTGCAATAACCCGC...CATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp ACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCCCCAGGGAGAGGGGGTaGAGACAGCGAGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TVVSLAGLVGNVTKEVPIPRERG*RQRGSH
Trigger: GTGGCTGCCTCGCTGTCTGCACCCCCTCTCCCTGGG...GATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CACAGGTGCGGCCATGCAACCAGGACGCGGGGCAGGCAAGTGAGAGGACCTGGGTCTCGTGCTCACCACTaGCCAAGAGTTAACGAATGT +
Preference number: 4 (lower is better)
Translates to: HRCGHATRTRGRQVRGPGSRAHH*PRVNEC
Trigger: ACATTCGTTAACTCTTGGGCAGTGGTGAGCACGAGA...CCCAGGTCCTCTCACTTGCCTGCCCCGCGTCCTGGTTGCATGGCCGCACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR GCA 90 bp CGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGCAGAAAGTCATCTCGTaGTCACCACTGCCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: RSRAHTESSLRSRPTAPGQKVIS*SPLPKS
Trigger: ACTCTTGGGCAGTGGTGAGCACGAGATGACTTTCTG...CCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR GCA 90 bp GTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGAGGAAATGACGCTGCACACACACAGGTaGGGCCATGCAACCAGGACG +
Preference number: 4 (lower is better)
Translates to: VQHHVVHLHLRRLREEMTLHTHR*GHATRT
Trigger: CGTCCTGGTTGCATGGCCGCACCTGTGTGTGTGCAG...CGTCATTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR CCA 90 bp CAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCACTGTCCTACTGCGGCATaGAACCAGGATCTTAACGGA +
Preference number: 4 (lower is better)
Translates to: QVLPRLWSPAPTRKTRSHCPTAA*NQDLNG
Trigger: TCCGTTAAGATCCTGGTTCCATGCCGCAGTAGGACA...GTGGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR CCA 90 bp CTCTGTGTTGGGCGGTCTGTGGACACTGGTACCGGGAGAGCTCCTACCGTGACATGGGATGTGCAGACTTaGGCCTGCTGTCCTACTGCG +
Preference number: 4 (lower is better)
Translates to: LCVGRSVDTGTGRAPTVTWDVQT*ACCPTA
Trigger: CGCAGTAGGACAGCAGGCCCAAGTCTGCACATCCCA...TGTCACGGTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGCCCAACACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTGGCATGGTGCATCACTaGGATGTGCAGACTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LPGRDALSPGGCRTNHGSGMVHH*DVQTWA
Trigger: GGCCCAAGTCTGCACATCCCAGTGATGCACCATGCC...ACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp AGCTTCCCTGGTGGCAGCTGCGAGCATGCTCCTTGGAGAGCAGGTAGTTGGCTACACTTTCTGCGGGGCTaGGACTCCGTCACCACAGCT +
Preference number: 4 (lower is better)
Translates to: SFPGGSCEHAPWRAGSWLHFLRG*DSVTTA
Trigger: AGCTGTGGTGACGGAGTCCCAGCCCCGCAGAAAGTG...TAGCCAACTACCTGCTCTCCAAGGAGCATGCTCGCAGCTGCCACCAGGGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR CCA 90 bp ACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCACTTGCGAGCATGCTCCTTaGAGAGCAGGTAGTTGGCTA +
Preference number: 4 (lower is better)
Translates to: TSYAPGDHLGDMWPPSPTCEHAP*RAGSWL
Trigger: TAGCCAACTACCTGCTCTCCAAGGAGCATGCTCGCA...AGTGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGCTGTTGGCGAAGGCCTaGACAATGTGGTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: DGLPRATSYAPGDHLGDMLLAKA*TMWFCM
Trigger: CATGCAGAACCACATTGTCCAGGCCTTCGCCAACAG...CATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACTGTTGGCGAAGGCCTaGACAATGTGGTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: KGWLAQSHQLCTGRPPGGLLAKA*TMWFCM
Trigger: CATGCAGAACCACATTGTCCAGGCCTTCGCCAACAG...TCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CTCTGTGTTGGGCGGTCTGTGGACACTGGTACCGGGAGAGCTCCTACCGTGACATGGCGTTGCCGCTGTTaGCGAAGGCCTGGACAATGT +
Preference number: 4 (lower is better)
Translates to: LCVGRSVDTGTGRAPTVTWRCRC*RRPGQC
Trigger: ACATTGTCCAGGCCTTCGCCAACAGCGGCAACGCCA...TGTCACGGTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGCCCAACACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACACGTTGGATGTTCTGTaGATGGTGAAGCGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RDGLPRATSYAPGDHLGDTLDVL*MVKRLL
Trigger: CAGCAAGCGCTTCACCATCCACAGAACATCCAACGT...GTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACCACCAATCTCTTCAGTaGTGTGCGGCTTCTTCATCG +
Preference number: 4 (lower is better)
Translates to: RDGLPRATSYAPGDHLGDHQSLQ*CAASSS
Trigger: CGATGAAGAAGCCGCACACCACTGAAGAGATTGGTG...GTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAACTTCAGGCCCAGGGTaGAGCCATTCCTGGATATGG +
Preference number: 4 (lower is better)
Translates to: QQSPHRELPQIQTDSSRETSGPG*SHSWIW
Trigger: CCATATCCAGGAATGGCTCCACCCTGGGCCTGAAGT...TTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp ACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGCTGGCCGAGTGCTCTaGGCTGGAGCTGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: THCRFSCRAGRECHQRGSAGRVL*AGAAGA
Trigger: GGCTCCAGCAGCTCCAGCCCAGAGCACTCGGCCAGC...GGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGCCACTCCTGGGGGTCTaGGGGGCCTTGGTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: LTHTLSFLLQGWSGMSPKPLLGV*GALVES
Trigger: CGACTCCACCAAGGCCCCCCAGACCCCCAGGAGTGG...CTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGTCCACTCCTGGGGGTCTaGGGGGCCTTGGTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: SLNKSPLGALFVCWEHTGPLLGV*GALVES
Trigger: CGACTCCACCAAGGCCCCCCAGACCCCCAGGAGTGG...ACCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp CGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGATTGCAGGCTCAGTGGTaGTGTTGCTCAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: RPPLLTHTLSFLLQGWSGLQAQW*CCSGQG
Trigger: CCCCTGTCCTGAGCAACACCACCACTGAGCCTGCAA...TCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTTATGGACGGGCCAAGTaGAGGCAACGACGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QVCGHLCSHTHCRFSCRAYGRAK*RQRRGE
Trigger: CTCACCCCGTCGTTGCCTCCACTTGGCCCGTCCATA...AGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTACAGCCCTGGCTCTATaGACGGGCCAAGTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PGKDVQQVCGHLCSHTHCTALAL*TGQVEA
Trigger: TGCCTCCACTTGGCCCGTCCATAGAGCCAGGGCTGT...ACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AAGAGCAGCCAGAAAGCCCCAAGCTCTGGAGGCTTCCACTCTCGTGAATCAGCACTCTTCCTCTTCCCGTaGGGAGCCGCAGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: KSSQKAPSSGGFHSRESALFLFP*GAAVAS
Trigger: GGAGGCCACTGCGGCTCCCCACGGGAAGAGGAAGAG...TGCTGATTCACGAGAGTGGAAGCCTCCAGAGCTTGGGGCTTTCTGGCTGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp AGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGACACATCCCACCTGCTaGCCATTCACCTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SRAHTESSLRSRPTAPGKTHPTC*PFTCGC
Trigger: ACAGCCACAGGTGAATGGCCAGCAGGTGGGATGTGT...CTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCCTGACAGAGTGCCGAAGTGGGTCCTaGTGCAGGCCGCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GTPCLQEAAEQTTVVLTECRSGS*CRPPSS
Trigger: TGAAGAAGGCGGCCTGCACCAGGACCCACTTCGGCA...CTCTGTCAGGACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp ACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCGCAGCTGTGCCGAAGTaGGTCCTGGTGCAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: TVVSLAGLVGNVTKEVPIAAVPK*VLVQAA
Trigger: GGCGGCCTGCACCAGGACCCACTTCGGCACAGCTGC...GATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCTATTTGAGCAGTTCCTaGACCACATCAGACTCCCGC +
Preference number: 4 (lower is better)
Translates to: AHTESSLRSRPTAPGKGRYLSSS*TTSDSR
Trigger: GCGGGAGTCTGATGTGGTCCAGGAACTGCTCAAATA...GCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCCTGACAGAGGCGGTCTGTGGACACTaGTACCGGGAGAGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: GTPCLQEAAEQTTVVLTEAVCGH*YRESSY
Trigger: GTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGC...CTCTGTCAGGACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp AGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGTCAAAGCCTCTGTGTTaGGCGGTCTGTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: SRAHTESSLRSRPTAPGKSKPLC*AVCGHW
Trigger: CCAGTGTCCACAGACCGCCCAACACAGAGGCTTTGA...CTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp AGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCCACCGGGAGACCACCTaGGGGACATGTGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: SQSTEARPSSLNIQRLVRHRETT*GTCGHH
Trigger: ATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTG...GCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp GGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAACCGAGAAGCAAGGGATaGCTTGCCCAGAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: GHLCSHTHCRFSCRAGREPRSKG*LAQSHQ
Trigger: CTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGG...TTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp GGCATCTCGATGCGGCTGGCAAGAAGTCACCCTTCTGCAAGTGACTGGGACACAGCTCGGACACAACGGTaGCGTCAGCCCCGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: GISMRLARSHPSASDWDTARTQR*RQPREA
Trigger: TGCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGC...TGTGTCCCAGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCATCGAGATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp CATGTGCTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCGATCTTGGCAACACGTaGGGCTCCCCAGGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: HVLSLPDKLQSQSTEARPDLGNT*GSPGPR
Trigger: CCGGGGGCCTGGGGAGCCCCACGTGTTGCCAAGATC...GGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR CAA 72 bp TCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTaGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGT +
Preference number: 4 (lower is better)
Translates to: SDPDRQLPGRDA*SPGGCRTNHGS
Trigger: ACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000587379.1
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp AGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACTGGATGGTGGCATTaGGAAAGCAGGTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: SPEKQGMACPEPPAMHRETGWWH*ESRCCQ
Trigger: TTGGCAACACCTGCTTTCTCAATGCCACCATCCAGT...CTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGATGTTCTTCTTGGAGTaGTCTGGAATCACACTCGGG +
Preference number: 4 (lower is better)
Translates to: RSRAHTESSLRSRPTAPGMFFLE*SGITLG
Trigger: CCCGAGTGTGATTCCAGATCACTCCAAGAAGAACAT...CCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp GGCGTCAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACAAGTTCCGTCGAGTCTaGAGTTTCTGGAAGGCGTTG +
Preference number: 4 (lower is better)
Translates to: GVSPEKQGMACPEPPAMHKFRRV*SFWKAL
Trigger: CAACGCCTTCCAGAAACTTCAGACTCGACGGAACTT...GTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTGACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp TCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCGCAGCCTTTGCTGGGTaGGTCACAGACCAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: SREGTPCLQEAAEQTTVVAAFAG*VTDQKF
Trigger: GAACTTCTGGTCTGTGACTCACCCAGCAAAGGCTGC...GACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000587379.1
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp ACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCGCTCTCCAGGACAGTTaGGAGCTACTCACAAGGAAG +
Preference number: 4 (lower is better)
Translates to: TESSLRSRPTAPGKGRLVALQDS*ELLTRK
Trigger: CTTCCTTGTGAGTAGCTCTCAACTGTCCTGGAGAGC...GACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp CACTGTTCGTGTGCTGGGAACACACAGGTCAATGAAGAGCAGCCAGAAAGCCCCCAGGAGAGGGCACCCTaGGCAGCTCCACTCACTGCT +
Preference number: 4 (lower is better)
Translates to: HCSCAGNTQVNEEQPESPQERAP*AAPLTA
Trigger: AGCAGTGAGTGGAGCTGCTCAGGGTGCCCTCTCCTG...GGGGCTTTCTGGCTGCTCTTCATTGACCTGTGTGTTCCCAGCACACGAACAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589225.5
ENST00000591052.5
CDS-3UTR TCA 90 bp GTTGTCCATCTCCACCTGCGACGACTCCGGGAGGAAATGACGGGGACAGACCCGAACATACCCTGCCCGTaGAGGCATGTGCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: VVHLHLRRLREEMTGTDPNIPCP*RHVLSL
Trigger: AAGGGAAAGCACATGCCTTCACGGGCAGGGTATGTT...CGGGTCTGTCCCCGTCATTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR TCA 90 bp TCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCTGGAGGGAAGGGACGTaGCTCCACCCAACAGTGATA +
Preference number: 4 (lower is better)
Translates to: SREGTPCLQEAAEQTTVVWREGT*LHPTVI
Trigger: TATCACTGTTGGGTGGAGTCACGTCCCTTCCCTCCA...GACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592231.5
CDS-3UTR GCA 90 bp ATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACGGCCTGCTGTCCTACTaGGGCATGGAACCAGGATCT +
Preference number: 4 (lower is better)
Translates to: IRRYRGLLRPQIASALQDGLLSY*GMEPGS
Trigger: AGATCCTGGTTCCATGCCGCAGTAGGACAGCAGGCC...GTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGATGCATCACTGGGATGTaGAGACTTGGGCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: RPPLLTHTLSFLLQGWSGCITGM*RLGPAV
Trigger: GACAGCAGGCCCAAGTCTGCACATCCCAGTGATGCA...TCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CTCTGTGTTGGGCGGTCTGTGGACACTGGTACCGGGAGAGCTCCTACCGTGACATGCATCACTGGGATGTaGAGACTTGGGCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LCVGRSVDTGTGRAPTVTCITGM*RLGPAV
Trigger: GACAGCAGGCCCAAGTCTGCACATCCCAGTGATGCA...TGTCACGGTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGCCCAACACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp TCTAGAGAAGCCTCAAAGCCTCTGTGTTGGGCGGTCTGTGGACACTGGTACCGGCATACGTGTGCTCACTaGCCTGTCTCCTGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: SREASKPLCWAVCGHWYRHTCAH*PVSWPV
Trigger: CACCGGCCAGGAGACAGGGCAGTGAGCACACGTATG...CCGGTACCAGTGTCCACAGACCGCCCAACACAGAGGCTTTGAGGCTTCTCTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTTGTCCGAGACGCTCTTaGACACGGAGCACTTCACGC +
Preference number: 4 (lower is better)
Translates to: PGKDVQQVCGHLCSHTHCCPRRS*TRSTSR
Trigger: GCGTGAAGTGCTCCGTGTGCAAGAGCGTCTCGGACA...ACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp AAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGAGGTACCACTGTCCATTaGTTGCCTTCACGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: KGWLAQSHQLCTGRPPGGGTTVH*LPSRSS
Trigger: ACTGCTACGTGAAGGCAAGCAATGGACAGTGGTACC...TCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp ATGCGGCTGGCAAGAAGTCACCCTTCTGCAAGTGACTGGGACACATGCCAGATACCTTGGTGGAGTCGCTaGTGGCCGAGTGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: MRLARSHPSASDWDTCQIPWWSR*WPSALG
Trigger: GCCCAGAGCACTCGGCCAGCAGCGACTCCACCAAGG...TATCTGGCATGTGTCCCAGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp TCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGTGGCTGTCTCTGTGTCTaGCCCTCCTGCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SLNKSPLGALFVCWEHTGGCLCV*PSCRAL
Trigger: CAGCGCCCTGCAGGAGGGGCAGACACAGAGACAGCC...ACCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp ACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGAGAGGGTGTGTGCCATCTTCCTaGCGTCTGACAGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TEARPSSLNIQRLVRRRGCVPSS*RLTAGS
Trigger: GCTGCCCGCTGTCAGACGGCAGGAAGATGGCACACA...CCCTCTCCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAGTAACACATCCCACCTaGTGGCCATTCACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RPPLLTHTLSFLLQGWSGVTHPT*WPFTCG
Trigger: GCCACAGGTGAATGGCCAGCAGGTGGGATGTGTTAC...TCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp ATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACTCCTCCGCTTCCTGCTaGTCGCGTGGTGGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: IQSLNKSPLGALFVCWEHSSASC*SRGGRP
Trigger: CGGACGGCCACCACGCGAGCAGCAGGAAGCGGAGGA...GTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp CTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCTTCCTCCTCCGCTTCCTaGTGCTCGCGTGGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: LSFLLQGWSGMSPKRFRSSSSAS*CSRGGR
Trigger: ACGGCCACCACGCGAGCAGCAGGAAGCGGAGGAGGA...AGATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGCGAAGTGGGTCCTGGTaGAGGCCGCCTTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: QSTEARPSSLNIQRLVRRRSGSW*RPPSSP
Trigger: TGGTGAAGAAGGCGGCCTGCACCAGGACCCACTTCG...CCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CACACACACCCCCACCTCACCCTTACACCCACCCCCTCGGAACCGACCTCCTTCCTTGGGCATTTGAGATaGCCATCCTCTTCTACTGCC +
Preference number: 4 (lower is better)
Translates to: HTHPHLTLTPTPSEPTSFLGHLR*PSSSTA
Trigger: GGCAGTAGAAGAGGATGGGCATCTCAAATGCCCAAG...GAAGGAGGTCGGTTCCGAGGGGGTGGGTGTAAGGGTGAGGTGGGGGTGTGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp TCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTTGGGCATTTGAGATaGCCATCCTCTTCTACTGCC +
Preference number: 4 (lower is better)
Translates to: SLRSRPTAPGKGRLVSRRLGHLR*PSSSTA
Trigger: GGCAGTAGAAGAGGATGGGCATCTCAAATGCCCAAG...CCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp AAGAGGTTCCGATCTAGAGAAGCCTCAAAGCCTCTGTGTTGGGCGGTCTGTGGAGCCATTCGCGGATGGTaGGCAGCTGCTGGACTCGGG +
Preference number: 4 (lower is better)
Translates to: KRFRSREASKPLCWAVCGAIRGW*AAAGLG
Trigger: CCCGAGTCCAGCAGCTGCGCACCATCCGCGAATGGC...TCCACAGACCGCCCAACACAGAGGCTTTGAGGCTTCTCTAGATCGGAACCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp ATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACGAGGCTGGCAGCCTTTaGTGGGTGAGTCACAGACCA +
Preference number: 4 (lower is better)
Translates to: IRRYRGLLRPQIASALQDEAGSL*WVSHRP
Trigger: TGGTCTGTGACTCACCCAGCAAAGGCTGCCAGCCTC...GTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CTCTGTGTTGGGCGGTCTGTGGACACTGGTACCGGGAGAGCTCCTACCGTGACACACACACCCCACACATaGCCTTCTCCAAGTGACCAG +
Preference number: 4 (lower is better)
Translates to: LCVGRSVDTGTGRAPTVTHTPHT*PSPSDQ
Trigger: CTGGTCACTTGGAGAAGGGCATGTGTGGGGTGTGTG...TGTCACGGTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGCCCAACACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp GGCATCTCGATGCGGCTGGCAAGAAGTCACCCTTCTGCAAGTGACTGGGACACAAGGGGCAGCAGCCTCTaGCAGCACAGACCACTGTCT +
Preference number: 4 (lower is better)
Translates to: GISMRLARSHPSASDWDTRGSSL*QHRPLS
Trigger: AGACAGTGGTCTGTGCTGGCAGAGGCTGCTGCCCCT...TGTGTCCCAGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCATCGAGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp GTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGAGGAAATGACGCTCACAAGGAAGGGGTaGACAGTAGGGCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: VQHHVVHLHLRRLREEMTLTRKG*TVGPPS
Trigger: AGAGGGTGGCCCTACTGTGCACCCCTTCCTTGTGAG...CGTCATTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGACCCCAAATAGCCTCTaGTCTCCAGGACAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: LPQIQTDSSREGTPCLQETPNSL*SPGQLR
Trigger: TCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGT...CTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp AGGGCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTAGGGCTGAGTTTGGTTaGGCAGGTGCTACGCGGAGC +
Preference number: 4 (lower is better)
Translates to: RAPPTPNSLCSPGQLRATRAEFG*AGATRS
Trigger: GCTCCGCGTAGCACCTGCCCAACCAAACTCAGCCCT...AGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGTGTCCTACTGCGGCATaGAACCAGGATCTTAACGGA +
Preference number: 4 (lower is better)
Translates to: LPQIQTDSSREGTPCLQECPTAA*NQDLNG
Trigger: TCCGTTAAGATCCTGGTTCCATGCCGCAGTAGGACA...CTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGGGATGTGCAGACTTaGGCCTGCTGTCCTACTGCG +
Preference number: 4 (lower is better)
Translates to: GHLCSHTHCRFSCRAGREWDVQT*ACCPTA
Trigger: CGCAGTAGGACAGCAGGCCCAAGTCTGCACATCCCA...TTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGCTTCCCTGGTGGCAGCTGCGAGCATGCTCCTTGGAGAGCAGGTAGTTGGCTAGGCATGGTGCATCACTaGGATGTGCAGACTTGGGCC +
Preference number: 4 (lower is better)
Translates to: SFPGGSCEHAPWRAGSWLGMVHH*DVQTWA
Trigger: GGCCCAAGTCTGCACATCCCAGTGATGCACCATGCC...TAGCCAACTACCTGCTCTCCAAGGAGCATGCTCGCAGCTGCCACCAGGGAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR CCA 90 bp GATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCTATCCACTATTGGCATaGTGCATCACTGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: DPTKPPRTSRTSPETALSYPLLA*CITGMC
Trigger: GCACATCCCAGTGATGCACCATGCCAATAGTGGATA...GGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp AGCAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCTATCCACTATTGGCATaGTGCATCACTGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: SRCCQGCGVLRPRGRPAPYPLLA*CITGMC
Trigger: GCACATCCCAGTGATGCACCATGCCAATAGTGGATA...GGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR CCA 90 bp CAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGAAGCTCTTGCTGGCTaGCTCGAACTCGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: QPREARDGLPRATSYAPGEALAG*LELDFL
Trigger: CAGAAAATCGAGTTCGAGCCAGCCAGCAAGAGCTTC...TCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATAGCCTCTGCTGTGTTGCCAAGGTTGTaGAGTCCTGCGCCCACGCGG +
Preference number: 4 (lower is better)
Translates to: SRCIRRYRGLLRPQIASAVLPRL*SPAPTR
Trigger: CCGCGTGGGCGCAGGACTCCACAACCTTGGCAACAC...AGCAGAGGCTATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAAATGCAGAAGCTTCCCTaGTGGCAGCTGCGAGCATGC +
Preference number: 4 (lower is better)
Translates to: GHLCSHTHCRFSCRAGREMQKLP*WQLRAC
Trigger: GCATGCTCGCAGCTGCCACCAGGGAAGCTTCTGCAT...TTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCATTTGACGATCCAACTTaGCACAGCCATTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LPRATSYAPGDHLGDMWPFDDPT*HSHSGR
Trigger: CCTGCCTGAATGGCTGTGCCAAGTTGGATCGTCAAA...TGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGACTTCTTGGAGTGATCTaGAATCACACTCGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RPPLLTHTLSFLLQGWSGLLGVI*NHTRAA
Trigger: GGCCGCCCGAGTGTGATTCCAGATCACTCCAAGAAG...TCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGGGCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCCCCGAGGGCAGCTTTaGAGGAATGCAGCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: RAPPTPNSLCSPGQLRATPRGQL*RNAAVL
Trigger: CAGAACGGCTGCATTCCTCCAAAGCTGCCCTCGGGG...AGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTTTGCAGGCTCAGTGGTaGTGTTGCTCAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: QVCGHLCSHTHCRFSCRALQAQW*CCSGQG
Trigger: CCCCTGTCCTGAGCAACACCACCACTGAGCCTGCAA...AGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGCAGGTGACACAGCCCTaGCTCTATGGACGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QSTEARPSSLNIQRLVRRQVTQP*LYGRAK
Trigger: CTTGGCCCGTCCATAGAGCCAGGGCTGTGTCACCTG...CCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GAGAAACGAGACCCGAATCTTCCCACTGCCACCCTCGGGTATGAGTCCAACCTAGCAGCGCCGTCGAGATaGAGGAGCAGCTCCGTGGTT +
Preference number: 4 (lower is better)
Translates to: EKRDPNLPTATLGYESNLAAPSR*RSSSVV
Trigger: AACCACGGAGCTGCTCCTCCATCTCGACGGCGCTGC...TAGGTTGGACTCATACCCGAGGGTGGCAGTGGGAAGATTCGGGTCTCGTTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp ATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACGGGCTCACTGGCCTCTaGCAACTGGTGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: IRRYRGLLRPQIASALQDGLTGL*QLVWKR
Trigger: TCTCTTCCACACCAGTTGCCAGAGGCCAGTGAGCCC...GTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGGAGGTCTAAGTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGTTCCTGCTGCTCGCGTaGTGGCCGTCCGTAACACAT +
Preference number: 4 (lower is better)
Translates to: RRSKSNTTLSISTCDDSGFLLLA*WPSVTH
Trigger: ATGTGTTACGGACGGCCACCACGCGAGCAGCAGGAA...CCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGACTTAGACCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGTTTCTCTTGCAGGGCTaGTCGGGAATGTCACCAAAG +
Preference number: 4 (lower is better)
Translates to: ELPQIQTDSSREGTPCLQFLLQG*SGMSPK
Trigger: CTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAA...CTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp TCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACTTTCTCTTGCAGGGCTaGTCGGGAATGTCACCAAAG +
Preference number: 4 (lower is better)
Translates to: SRPTAPGKGRLVSRRLQNFLLQG*SGMSPK
Trigger: CTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAA...GTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp GGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAAAAAGGGAGAGGTGGCTaGGTGGGGTCACCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GHLCSHTHCRFSCRAGREKGRGG*VGSPLP
Trigger: AGGAAGAGGTGACCCCACCCAGCCACCTCTCCCTTT...TTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp TCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCGATCCTGACAGAGGGTaGATCGGTCGGCTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: SREGTPCLQEAAEQTTVVDPDRG*IGRLFS
Trigger: ACTGAACAGCCGACCGATCCACCCTCTGTCAGGATC...GACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587379.1
CDS-3UTR TCA 90 bp AGCTTCCCTGGTGGCAGCTGCGAGCATGCTCCTTGGAGAGCAGGTAGTTGGCTAATCTTAACGGAGGGCTaGGTTTGGTTGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SFPGGSCEHAPWRAGSWLILTEG*VWLGRC
Trigger: GCACCTGCCCAACCAAACTCAGCCCTCCGTTAAGAT...TAGCCAACTACCTGCTCTCCAAGGAGCATGCTCGCAGCTGCCACCAGGGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR TCA 90 bp GCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATAGCCTGTCCTGGAGATaGGGCCCTCGGGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: ATSAHTHTVVSLAGLVGNSLSWR*GPRDFS
Trigger: AGAAAAGTCCCGAGGGCCTCATCTCCAGGACAGGCT...ATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp ACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCAGGTCCTCGTTGACCTaGGGCAGCGCCGTCGAGATG +
Preference number: 4 (lower is better)
Translates to: TVVSLAGLVGNVTKEVPIRSSLT*GSAVEM
Trigger: CATCTCGACGGCGCTGCCTCAGGTCAACGAGGACCT...GATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp ACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCCACTCCTTGGGCATTTaGGATGCCCATCCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: TESSLRSRPTAPGKGRLVHSLGI*DAHPLL
Trigger: TAGAAGAGGATGGGCATCTCAAATGCCCAAGGAGTG...GACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAGCTCTCCAGGACAGTTaGGAGCTACTCACAAGGAAG +
Preference number: 4 (lower is better)
Translates to: RPPLLTHTLSFLLQGWSGALQDS*ELLTRK
Trigger: CTTCCTTGTGAGTAGCTCTCAACTGTCCTGGAGAGC...TCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp CAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTCCAGCAGAGCCACACTaGAGGAGGTCTAAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: QVCGHLCSHTHCRFSCRAPAEPH*RRSKSN
Trigger: GTTGGACTTAGACCTCCTTCAGTGTGGCTCTGCTGG...AGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp AGGAGGTCTAAGTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGGTGGCCACAGGAGCTTaGTTCTCTCCCACCCTTCTA +
Preference number: 4 (lower is better)
Translates to: RRSKSNTTLSISTCDDSGVATGA*FSPTLL
Trigger: TAGAAGGGTGGGAGAGAATCAAGCTCCTGTGGCCAC...CCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGACTTAGACCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp CAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGGTGGCCACAGGAGCTTaGTTCTCTCCCACCCTTCTC +
Preference number: 4 (lower is better)
Translates to: QSTEARPSSLNIQRLVRRVATGA*FSPTLL
Trigger: GAGAAGGGTGGGAGAGAATCAAGCTCCTGTGGCCAC...CCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591052.5
CDS-3UTR GCA 90 bp ACAGCAGCCTGGAAAGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCGTTTGGTTGGGCAGGTaGTACGCGGAGCTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: TAAWKADVFAGIEGSSDPVWLGR*YAELLN
Trigger: ATTCAGGAGCTCCGCGTAGCACCTGCCCAACCAAAC...GGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCTTTCCAGGCTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp AGCTTCCCTGGTGGCAGCTGCGAGCATGCTCCTTGGAGAGCAGGTAGTTGGCTAGTTTGGTTGGGCAGGTaGTACGCGGAGCTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: SFPGGSCEHAPWRAGSWLVWLGR*YAELLN
Trigger: ATTCAGGAGCTCCGCGTAGCACCTGCCCAACCAAAC...TAGCCAACTACCTGCTCTCCAAGGAGCATGCTCGCAGCTGCCACCAGGGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR GCA 90 bp ATGAGAAGGCACAGCCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTCAGCTCTCATACGTGTaGTCACTGCCCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: MRRHSLAKMSSRCAATSAQLSYV*SLPCLL
Trigger: CAGGAGACAGGGCAGTGAGCACACGTATGAGAGCTG...AGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGGCTGTGCCTTCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp TCTAGAGAAGCCTCAAAGCCTCTGTGTTGGGCGGTCTGTGGACACTGGTACCGGTGTCCGAGACGCTCTTaGACACGGAGCACTTCACGC +
Preference number: 4 (lower is better)
Translates to: SREASKPLCWAVCGHWYRCPRRS*TRSTSR
Trigger: GCGTGAAGTGCTCCGTGTGCAAGAGCGTCTCGGACA...CCGGTACCAGTGTCCACAGACCGCCCAACACAGAGGCTTTGAGGCTTCTCTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp AGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGATCTCTTCAGTGGTGTaGGGCTTCTTCATCGTCCCA +
Preference number: 4 (lower is better)
Translates to: SRAHTESSLRSRPTAPGKISSVV*GFFIVP
Trigger: TGGGACGATGAAGAAGCCGCACACCACTGAAGAGAT...CTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp GATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTGTGGAGGAGACATGGTaGTTGCAGGCTCAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: DVQQVCGHLCSHTHCRFSVEETW*LQAQWW
Trigger: CCACCACTGAGCCTGCAAGCACCATGTCTCCTCCAC...AGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp ACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCGTGGCCTCCCTGATGTaGTGTGGGAGGCGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: TVVSLAGLVGNVTKEVPIVASLM*CGRRVS
Trigger: AGAGACGCGCCTCCCACAGCACATCAGGGAGGCCAC...GATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATGTGGCCTCCCTGATGTaGTGTGGGAGGCGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: HCRFSCRAGRECHQRGSDVASLM*CGRRVS
Trigger: AGAGACGCGCCTCCCACAGCACATCAGGGAGGCCAC...ATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CAGATATACACACAACCCACATCCCACACACACCCCACACATGCCCTTCTCCAAGGCTGTCTCTGTGTCTaGCCCTCCTGCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: QIYTQPTSHTHPTHALLQGCLCV*PSCRAL
Trigger: CAGCGCCCTGCAGGAGGGGCAGACACAGAGACAGCC...TTGGAGAAGGGCATGTGTGGGGTGTGTGTGGGATGTGGGTTGTGTGTATATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp ATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACTCCTCCTCCGCTTCCTaGTGCTCGCGTGGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: IQSLNKSPLGALFVCWEHSSSAS*CSRGGR
Trigger: ACGGCCACCACGCGAGCAGCAGGAAGCGGAGGAGGA...GTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp CAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACACGGATGGTGCGCAGCTaGTGGACTCGGGGACAACAG +
Preference number: 4 (lower is better)
Translates to: QSLNKSPLGALFVCWEHTRMVRS*WTRGQQ
Trigger: CTGTTGTCCCCGAGTCCAGCAGCTGCGCACCATCCG...TGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp GATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTGAGGCTGGCAGCCTTTaGTGGGTGAGTCACAGACCA +
Preference number: 4 (lower is better)
Translates to: DVQQVCGHLCSHTHCRFSEAGSL*WVSHRP
Trigger: TGGTCTGTGACTCACCCAGCAAAGGCTGCCAGCCTC...AGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTCACACACCCCACACATaGCCTTCTCCAAGTGACCAG +
Preference number: 4 (lower is better)
Translates to: QVCGHLCSHTHCRFSCRAHTPHT*PSPSDQ
Trigger: CTGGTCACTTGGAGAAGGGCATGTGTGGGGTGTGTG...AGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp TTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCAAGTGACTGGGACACATaGCAGATATACACACAACCC +
Preference number: 4 (lower is better)
Translates to: LPRATSYAPGDHLGDMWPSDWDT*QIYTQP
Trigger: GGGTTGTGTGTATATCTGGCATGTGTCCCAGTCACT...TGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp GCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCTTGATCATCCTGCCCGTGTGCATGGCATCTCGATaGGGCTGGCAAGAAGTCACC +
Preference number: 4 (lower is better)
Translates to: ALEASTLVNQHRLIILPVCMASR*GWQEVT
Trigger: GGTGACTTCTTGCCAGCCGCATCGAGATGCCATGCA...CACGGGCAGGATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp CCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAAGGATGTCCAGCAGGTGTaGGGCCACCTCTGCTCACAC +
Preference number: 4 (lower is better)
Translates to: PPTPNSLCSPGQLRATHKDVQQV*GHLCSH
Trigger: GTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATC...CTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp AGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATAGCCTCTGCTAGGGGCAGCAGCCTCTaGCAGCACAGACCACTGTCT +
Preference number: 4 (lower is better)
Translates to: SRCIRRYRGLLRPQIASARGSSL*QHRPLS
Trigger: AGACAGTGGTCTGTGCTGGCAGAGGCTGCTGCCCCT...AGCAGAGGCTATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCTCAGTGAAGACCTaGGGGTTATTGCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: QTDSSREGTPCLQEAAEQTSVKT*GLLQLQ
Trigger: TTGCAGCTGCAATAACCCGCAGGTCTTCACTGAGGT...TTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CACTGTTCGTGTGCTGGGAACACACAGGTCAATGAAGAGCAGCCAGAAAGCCCCAGCAGCTCCACTCACTaGTGCTGGGACACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: HCSCAGNTQVNEEQPESPSSSTH*CWDTGG
Trigger: GCCACCTGTGTCCCAGCAGCAGTGAGTGGAGCTGCT...GGGGCTTTCTGGCTGCTCTTCATTGACCTGTGTGTTCCCAGCACACGAACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589225.5
ENST00000591052.5
CDS-3UTR GCA 90 bp CGTCAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGCAGTTCACACAGGAATaGAAGTCAACACCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: RQPREARDGLPRATSYAPQFTQE*KSTPRE
Trigger: TTCTCGGGGTGTTGACTTGCATTCCTGTGTGAACTG...CGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR GCA 90 bp AGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGCAGTTCACACAGGAATaGAAGTCAACACCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: SPEKQGMACPEPPAMHREQFTQE*KSTPRE
Trigger: TTCTCGGGGTGTTGACTTGCATTCCTGTGTGAACTG...CTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR GCA 90 bp CAGCCTGGAAAGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATCTGCACACACACAGGTaGGGCCATGCAACCAGGACG +
Preference number: 4 (lower is better)
Translates to: QPGKQMYSQVSRAPPTPNLHTHR*GHATRT
Trigger: CGTCCTGGTTGCATGGCCGCACCTGTGTGTGTGCAG...ATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCTTTCCAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR GCA 90 bp CTGCTGGGACACAGGTGGCCACAGGAGCTTGATTCTCTCCCACCCTTCGTGACAAGGAGCTCTCCAGGGTaGGGAGGTCAACAGTGTCAA +
Preference number: 4 (lower is better)
Translates to: LLGHRWPQELDSLPPFVTRSSPG*GGQQCQ
Trigger: TTGACACTGTTGACCTCCGCACCCTGGAGAGCTCCT...TGTCACGAAGGGTGGGAGAGAATCAAGCTCCTGTGGCCACCTGTGTCCCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587379.1
CDS-3UTR GCA 90 bp GATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCGCCATAGGAATGTTCTaGTGCCACCATGTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: DPTKPPRTSRTSPETALSAIGMF*CHHVEK
Trigger: CTTTTCTACATGGTGGCAGCAGAACATTCCTATGGC...GGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp ACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCAGGAACAACTTATCCACTATTaGCATGGTGCATCACTGGGA +
Preference number: 4 (lower is better)
Translates to: TKPPRTSRTSPETALSQEQLIHY*HGASLG
Trigger: TCCCAGTGATGCACCATGCCAATAGTGGATAAGTTG...TTCCTGGGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp ATGCGGCTGGCAAGAAGTCACCCTTCTGCAAGTGACTGGGACACATGCCAGATACACTGCCCTGTCTCCTaGCCGGTGGGTCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: MRLARSHPSASDWDTCQIHCPVS*PVGHLH
Trigger: GTGGAGATGACCCACCGGCCAGGAGACAGGGCAGTG...TATCTGGCATGTGTCCCAGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp AGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCTAGAGAAGCCTCAAAGCGTGTTGCCAAGGTTGTaGAGTCCTGCGCCCACGCGG +
Preference number: 4 (lower is better)
Translates to: RAGRECHQRGSDLEKPQSVLPRL*SPAPTR
Trigger: CCGCGTGGGCGCAGGACTCCACAACCTTGGCAACAC...GCTTTGAGGCTTCTCTAGATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GGCATCTCGATGCGGCTGGCAAGAAGTCACCCTTCTGCAAGTGACTGGGACACAATGCAGAAGCTTCCCTaGTGGCAGCTGCGAGCATGC +
Preference number: 4 (lower is better)
Translates to: GISMRLARSHPSASDWDTMQKLP*WQLRAC
Trigger: GCATGCTCGCAGCTGCCACCAGGGAAGCTTCTGCAT...TGTGTCCCAGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCATCGAGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGAAGCGCTTGCTGGCTaGAACCTTCTTCTTGCATTT +
Preference number: 4 (lower is better)
Translates to: QPREARDGLPRATSYAPGEALAG*NLLLAF
Trigger: AAATGCAAGAAGAAGGTTCCAGCCAGCAAGCGCTTC...TCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp ACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCACTAGCCATTCCTGGATATaGGCACACCAATCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: TSYAPGDHLGDMWPPSPTSHSWI*AHQSLQ
Trigger: CTGAAGAGATTGGTGTGCCCATATCCAGGAATGGCT...AGTGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GTCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGCCCCGAGGGCAGCTTTaGAGGAATGCAGCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: VAEQISVRGTVRVLGTHRPRGQL*RNAAVL
Trigger: CAGAACGGCTGCATTCCTCCAAAGCTGCCCTCGGGG...CCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp CCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCAGGGTCGTCTAGGATaGTTGGCATGTGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PGKDVQQVCGHLCSHTHCQGRLG*LACVWV
Trigger: CACCCACACACATGCCAACCATCCTAGACGACCCTG...ACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGAGAGGTGCTATTCGAGTTGCTaGTCCCAGGCAGCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: HGSQALIFEHSETGPQERCYSSC*SQAAPE
Trigger: CTCAGGGGCTGCCTGGGACCAGCAACTCGAATAGCA...CCTCTCCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAAGGGCGGCGTTTTGGAGTaGCCAGCGGTGGAACAGTTC +
Preference number: 4 (lower is better)
Translates to: PPTPNSLCSPGQLRATHKGGVLE*PAVEQF
Trigger: GAACTGTTCCACCGCTGGCCACTCCAAAACGCCGCC...CTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TGTGCTGGGAACACACAGGTCAATGAAGAGCAGCCAGAAAGCCCCAAGCTCTGGCACTTGGCGGCGTTTTaGAGTGGCCAGCGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: CAGNTQVNEEQPESPKLWHLAAF*SGQRWN
Trigger: GTTCCACCGCTGGCCACTCCAAAACGCCGCCAAGTG...CCAGAGCTTGGGGCTTTCTGGCTGCTCTTCATTGACCTGTGTGTTCCCAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTAGAATCTGCTCCACTTaGCGGCGTTTTGGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: QVCGHLCSHTHCRFSCRARICST*RRFGVA
Trigger: GGCCACTCCAAAACGCCGCCAAGTGGAGCAGATTCT...AGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp ATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACGAGGTTTTCATGGGGTaGGTGAGGTCGGAGGATGGT +
Preference number: 4 (lower is better)
Translates to: IRRYRGLLRPQIASALQDEVFMG*VRSEDG
Trigger: ACCATCCTCCGACCTCACCCACCCCATGAAAACCTC...GTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp ATGAGAAGGCACAGCCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTCTGGCCATTCACCTGTaGCTGTGTGCCATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: MRRHSLAKMSSRCAATSALAIHL*LCAIFL
Trigger: CAGGAAGATGGCACACAGCCACAGGTGAATGGCCAG...AGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGGCTGTGCCTTCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCTTGATCATCCTGCCCGTGCTGGCCATTCACCTGTaGCTGTGTGCCATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: ALEASTLVNQHRLIILPVLAIHL*LCAIFL
Trigger: CAGGAAGATGGCACACAGCCACAGGTGAATGGCCAG...CACGGGCAGGATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp ACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCCTGCTGCTCGCGTGGTaGCCGTCCGTAACACATCCC +
Preference number: 4 (lower is better)
Translates to: THCRFSCRAGRECHQRGSLLLAW*PSVTHP
Trigger: GGGATGTGTTACGGACGGCCACCACGCGAGCAGCAG...GGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAAGTCAACACCCCGAGAAGAAAAGGAACATACCCTGCCCGTGAAGGCATGTGCCTGCTGCTCGCGTGGTaGCCGTCCGTAACACATCCC +
Preference number: 4 (lower is better)
Translates to: QVNTPRRKGTYPAREGMCLLLAW*PSVTHP
Trigger: GGGATGTGTTACGGACGGCCACCACGCGAGCAGCAG...GCACATGCCTTCACGGGCAGGGTATGTTCCTTTTCTTCTCGGGGTGTTGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR CCA 90 bp GGCGGGCTCGGACACAACGGTGGCGTCAGCCCCGAGAAGCAAGGGATGGCTTGCCTTTTTCTTTTTCCTTaGAGACTCTTCCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: GGLGHNGGVSPEKQGMACLFLFP*RLFHGL
Trigger: GAGGCCATGGAAGAGTCTCCAAGGAAAAAGAAAAAG...GCAAGCCATCCCTTGCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGCCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTGGGCTTGGCACTCCTTaGGCATTTGAGATGCCCATC +
Preference number: 4 (lower is better)
Translates to: PGKDVQQVCGHLCSHTHCGLGTP*AFEMPI
Trigger: GATGGGCATCTCAAATGCCCAAGGAGTGCCAAGCCC...ACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGGGACAACAGCATCTTaGGGCTTGGCACTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ATSAHTHTVVSLAGLVGNGTTAS*GLALLG
Trigger: CCCAAGGAGTGCCAAGCCCCAAGATGCTGTTGTCCC...ATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AACACCCCGAGAAGAAAAGGAACATACCCTGCCCGTGAAGGCATGTGCTTTCCCCCAGCCATTCGCGGATaGTGCGCAGCTGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: NTPRRKGTYPAREGMCFPPAIRG*CAAAGL
Trigger: GAGTCCAGCAGCTGCGCACCATCCGCGAATGGCTGG...GGGAAAGCACATGCCTTCACGGGCAGGGTATGTTCCTTTTCTTCTCGGGGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR CCA 90 bp AGCCACACTGAAGGAGGTCTAAGTCCAACACCACGTTGTCCATCTCCACCTGCGGTGTTGGGCGGTCTGTaGACACTGGTACCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SHTEGGLSPTPRCPSPPAVLGGL*TLVPGE
Trigger: CTCTCCCGGTACCAGTGTCCACAGACCGCCCAACAC...CGCAGGTGGAGATGGACAACGTGGTGTTGGACTTAGACCTCCTTCAGTGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp ACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCGCTCGGACACAACGGTaGCGTCAGCCCCGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: TVVSLAGLVGNVTKEVPIARTQR*RQPREA
Trigger: TGCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGC...GATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp GCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACGGAGAGGTGGCTGGGTaGGGTCACCTCTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: APPTPNSLCSPGQLRATHGEVAG*GHLFLS
Trigger: AGAAAGGAAGAGGTGACCCCACCCAGCCACCTCTCC...GTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp AGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACTTTGAACTCGTTTTCTaGGCCTCATCTTTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: RDGLPRATSYAPGDHLGDFELVF*ASSFPS
Trigger: GGAAGGGAAAGATGAGGCCCAGAAAACGAGTTCAAA...GTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR CCA 90 bp CCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCAGGAAGCCTGCCTGTTTTCTTTaGTCTGAACCTATGAACTCA +
Preference number: 4 (lower is better)
Translates to: PSRPGPAGRLRRQPFPRKPACFL*SEPMNS
Trigger: TGAGTTCATAGGTTCAGACCAAAGAAAACAGGCAGG...CTTCCTGGGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR TCA 90 bp AGGAGGTCTAAGTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGGTAGTAGCCTGCGTTTaGCGATCCAACTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: RRSKSNTTLSISTCDDSGVVACV*RSNLAQ
Trigger: CTGTGCCAAGTTGGATCGTCAAACGCAGGCTACTAC...CCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGACTTAGACCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CGTCAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGTATACGGACGTATGTTaGGGAATTCCGGATAGCCTA +
Preference number: 4 (lower is better)
Translates to: RQPREARDGLPRATSYAPYTDVC*GIPDSL
Trigger: TAGGCTATCCGGAATTCCTCAACATACGTCCGTATA...CGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp GTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGAGGAAATGACGAGCCAGGAGCTTAGGTaGGGTAGAGAGGACAACATC +
Preference number: 4 (lower is better)
Translates to: VQHHVVHLHLRRLREEMTSQELR*GREDNI
Trigger: GATGTTGTCCTCTCTACCTCACCTAAGCTCCTGGCT...CGTCATTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp ATGAGAAGGCACAGCCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTGAACAGTTCGTTTCCTaGGAATCGCAGAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: MRRHSLAKMSSRCAATSAEQFVS*ESQRWA
Trigger: GGCCCATCTCTGCGATTCTCAGGAAACGAACTGTTC...AGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGGCTGTGCCTTCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTCATCTTCCTGCCGTCTaGCAGCGGGCAGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LSLPDKLQSQSTEARPSSHLPAV*QRAAVP
Trigger: AGGCACAGCTGCCCGCTGTCAGACGGCAGGAAGATG...AGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp GGAGGCTTCCACTCTCGTGAATCAGCACCGCTTGATCATCGTGACAGGCTCCCAGCAGCCTTTGCTGGGTaGGTCACAGACCAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: GGFHSRESAPLDHRDRLPAAFAG*VTDQKF
Trigger: GAACTTCTGGTCTGTGACTCACCCAGCAAAGGCTGC...TGGGAGCCTGTCACGATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587010.5
CDS-3UTR TCA 90 bp GCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATAAGCCTCCACCTCAGTaGAGACCTGCGGGTTATTGC +
Preference number: 4 (lower is better)
Translates to: ATSAHTHTVVSLAGLVGNKPPPQ*RPAGYC
Trigger: GCAATAACCCGCAGGTCTTCACTGAGGTGGAGGCTT...ATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp AAGAGGTTCCGATCTAGAGAAGCCTCAAAGCCTCTGTGTTGGGCGGTCTGTGGACGGGGACAGACCCGATaGGGAAGGATGTTCACGGTC +
Preference number: 4 (lower is better)
Translates to: KRFRSREASKPLCWAVCGRGQTR*GRMFTV
Trigger: GACCGTGAACATCCTTCCTCATCGGGTCTGTCCCCG...TCCACAGACCGCCCAACACAGAGGCTTTGAGGCTTCTCTAGATCGGAACCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp AGTGTCTACAGTAGAGATCCTGACAGAGGGTGGATCGGTCGGCTGTTCAGTGGGGTGGCCACAGGAGCTTaGTTCTCTCCCACCCTTCGT +
Preference number: 4 (lower is better)
Translates to: SVYSRDPDRGWIGRLFSGVATGA*FSPTLR
Trigger: ACGAAGGGTGGGAGAGAATCAAGCTCCTGTGGCCAC...CCCACTGAACAGCCGACCGATCCACCCTCTGTCAGGATCTCTACTGTAGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587379.1
CDS-3UTR TCA 90 bp CACCACAGCCACCCGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGCACAAAGACAATTTGTaGTGGCAACCATCACATATA +
Preference number: 4 (lower is better)
Translates to: HHSHPILPSRPGPAGRLRHKDNL*WQPSHI
Trigger: TATATGTGATGGTTGCCATCACAAATTGTCTTTGTG...CCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCGGGTGGCTGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp CACTGTTCGTGTGCTGGGAACACACAGGTCAATGAAGAGCAGCCAGAAAGCCCCTACCGCAGGAACTCATaGGCGTCCTCCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: HCSCAGNTQVNEEQPESPYRRNS*ASSWFP
Trigger: TGGGAACCAGGAGGACGCGCATGAGTTCCTGCGGTA...GGGGCTTTCTGGCTGCTCTTCATTGACCTGTGTGTTCCCAGCACACGAACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp ACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCAGAGGACAACATCCCTaGTGTCCCAGGAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: THCRFSCRAGRECHQRGSRGQHP*CPRSPA
Trigger: GGCAGGGCTCCTGGGACAGCAGGGATGTTGTCCTCT...GGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp AACACCCCGAGAAGAAAAGGAACATACCCTGCCCGTGAAGGCATGTGCTTTCCCAGAGGACAACATCCCTaGTGTCCCAGGAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: NTPRRKGTYPAREGMCFPRGQHP*CPRSPA
Trigger: GGCAGGGCTCCTGGGACAGCAGGGATGTTGTCCTCT...GGGAAAGCACATGCCTTCACGGGCAGGGTATGTTCCTTTTCTTCTCGGGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR GCA 90 bp GTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTCCTTGGTGGAGTCGCTaGTGGCCGAGTGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: VTKPEHGSQALIFEHSETPWWSR*WPSALG
Trigger: GCCCAGAGCACTCGGCCAGCAGCGACTCCACCAAGG...AGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp AGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCTAGAGAAGCCTCAAAGCTGTGTGCCATCTTCCTaGCGTCTGACAGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: RAGRECHQRGSDLEKPQSCVPSS*RLTAGS
Trigger: GCTGCCCGCTGTCAGACGGCAGGAAGATGGCACACA...GCTTTGAGGCTTCTCTAGATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGCCCATCCTCTTCTACTaGCCGCTGTGTCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: QSTEARPSSLNIQRLVRRPILFY*PLCLLL
Trigger: AAGCAGGAGACACAGCGGGCAGTAGAAGAGGATGGG...CCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp AGGGCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCCCATCCTCTTCTACTaGCCGCTGTGTCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RAPPTPNSLCSPGQLRATPILFY*PLCLLL
Trigger: AAGCAGGAGACACAGCGGGCAGTAGAAGAGGATGGG...AGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp ATGAGAAGGCACAGCCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACTGTCGTTTCTCTTaGAGGGCTGGTCGGGAATGT +
Preference number: 4 (lower is better)
Translates to: MRRHSLAKMSSRCAATSAHCRFS*RAGREC
Trigger: ACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTG...AGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGGCTGTGCCTTCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp AGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCTAGAGAAGCCTCAAAGCAGGGGCAGCAGCCTCTaGCAGCACAGACCACTGTCT +
Preference number: 4 (lower is better)
Translates to: RAGRECHQRGSDLEKPQSRGSSL*QHRPLS
Trigger: AGACAGTGGTCTGTGCTGGCAGAGGCTGCTGCCCCT...GCTTTGAGGCTTCTCTAGATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp GGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAAAGACCTGCGGGTTATTaGAGCTGCAAGGGAAGCTAC +
Preference number: 4 (lower is better)
Translates to: GHLCSHTHCRFSCRAGRERPAGY*SCKGSY
Trigger: GTAGCTTCCCTTGCAGCTGCAATAACCCGCAGGTCT...TTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp AGAAGAAAAGGAACATACCCTGCCCGTGAAGGCATGTGCTTTCCCTTCCAGATACCCAGGGAGAGGGGGTaGAGACAGCGAGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: RRKGTYPAREGMCFPFQIPRERG*RQRGSH
Trigger: GTGGCTGCCTCGCTGTCTGCACCCCCTCTCCCTGGG...TATCTGGAAGGGAAAGCACATGCCTTCACGGGCAGGGTATGTTCCTTTTCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR GCA 90 bp AGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCTAGAGAAGCCTCAAAGCAGCTCCACTCACTGCTaGTGGGACACAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RAGRECHQRGSDLEKPQSSSTHC*WDTGGH
Trigger: GTGGCCACCTGTGTCCCAGCAGCAGTGAGTGGAGCT...GCTTTGAGGCTTCTCTAGATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp AGGGGCACTGTTCGTGTGCTGGGAACACACAGGTCAATGAAGAGCAGCCAGAAAAGCTCCACTCACTGCTaGTGGGACACAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RGTVRVLGTHRSMKSSQKSSTHC*WDTGGH
Trigger: GTGGCCACCTGTGTCCCAGCAGCAGTGAGTGGAGCT...TTTCTGGCTGCTCTTCATTGACCTGTGTGTTCCCAGCACACGAACAGTGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589225.5
ENST00000591052.5
CDS-3UTR GCA 90 bp GATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCATAGGAATGTTCTGCTaGCACCATGTAGAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: DPTKPPRTSRTSPETALSIGMFC*HHVEKV
Trigger: CACCTTTTCTACATGGTGGCAGCAGAACATTCCTAT...GGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp GATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTAGCGCTCCTGGACTGTaGCCTGTTCAAACACCGAAG +
Preference number: 4 (lower is better)
Translates to: DVQQVCGHLCSHTHCRFSSAPGL*PVQTPK
Trigger: CTTCGGTGTTTGAACAGGCCACAGTCCAGGAGCGCT...AGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGGCTGAGTTTGGTTaGGCAGGTGCTACGCGGAGC +
Preference number: 4 (lower is better)
Translates to: SVAEQISVRGTVRVLGTHRAEFG*AGATRS
Trigger: GCTCCGCGTAGCACCTGCCCAACCAAACTCAGCCCT...GTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp CGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAAGGAGAAGCTCTTGCTaGCTGGCTCGAACTCGATTT +
Preference number: 4 (lower is better)
Translates to: RPPLLTHTLSFLLQGWSGRRSSC*LARTRF
Trigger: AAATCGAGTTCGAGCCAGCCAGCAAGAGCTTCTCCT...TCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGGGCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTGAGACAGTCGCTCCGTaGGGAAAAGCACTTTCTGCG +
Preference number: 4 (lower is better)
Translates to: RAPPTPNSLCSPGQLRATETVAP*GKALSA
Trigger: CGCAGAAAGTGCTTTTCCCCACGGAGCGACTGTCTC...AGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGCAGAAGCTTCCCTGGTaGCAGCTGCGAGCATGCTCC +
Preference number: 4 (lower is better)
Translates to: LTHTLSFLLQGWSGMSPKQKLPW*QLRACS
Trigger: GGAGCATGCTCGCAGCTGCCACCAGGGAAGCTTCTG...CTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGCCACACTGAAGGAGGTCTAAGTCCAACACCACGTTGTCCATCTCCACCTGCGTGGCGTTGCCGCTGTTaGCGAAGGCCTGGACAATGT +
Preference number: 4 (lower is better)
Translates to: SHTEGGLSPTPRCPSPPAWRCRC*RRPGQC
Trigger: ACATTGTCCAGGCCTTCGCCAACAGCGGCAACGCCA...CGCAGGTGGAGATGGACAACGTGGTGTTGGACTTAGACCTCCTTCAGTGTGGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGATTTGACGATCCAACTTaGCACAGCCATTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RPPLLTHTLSFLLQGWSGFDDPT*HSHSGR
Trigger: CCTGCCTGAATGGCTGTGCCAAGTTGGATCGTCAAA...TCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGTGCCGATGTTCTTCTTaGAGTGATCTGGAATCACAC +
Preference number: 4 (lower is better)
Translates to: LRSRPTAPGKGRLVSRRLCRCSS*SDLESH
Trigger: GTGTGATTCCAGATCACTCCAAGAAGAACATCGGCA...CAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp ACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCGGAATGCAGCCGTTCTaGGACTTCAGGCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TVVSLAGLVGNVTKEVPIGMQPF*DFRPRV
Trigger: CACCCTGGGCCTGAAGTCCCAGAACGGCTGCATTCC...GATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGGGCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTATGTGTGTGGGTGTCTaGGAGAGTTTGGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RAPPTPNSLCSPGQLRATMCVGV*ESLGEG
Trigger: CCCTTCCCCCAAACTCTCCCAGACACCCACACACAT...AGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGGGGGGAAAAGTGCTGTaGAGGAGCTGGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: QSTEARPSSLNIQRLVRRGGKVL*RSWLLH
Trigger: GTGAAGAAGCCAGCTCCTCCACAGCACTTTTCCCCC...CCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GTGACCAGAACACATGCCACAGATGCCAGGTGTACACACCCCACACCCAACACATGCTATTCGAGTTGCTaGTCCCAGGCAGCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: VTRTHATDARCTHPTPNTCYSSC*SQAAPE
Trigger: CTCAGGGGCTGCCTGGGACCAGCAACTCGAATAGCA...TGTGTTGGGTGTGGGGTGTGTACACCTGGCATCTGTGGCATGTGTTCTGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp GTCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGTGCTATTCGAGTTGCTaGTCCCAGGCAGCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: VAEQISVRGTVRVLGTHRCYSSC*SQAAPE
Trigger: CTCAGGGGCTGCCTGGGACCAGCAACTCGAATAGCA...CCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp CAAGTCAACACCCCGAGAAGAAAAGGAACATACCCTGCCCGTGAAGGCATGTGCCCCTCCACAGGGTGCTaGCCTTCTTGGCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: QVNTPRRKGTYPAREGMCPSTGC*PSWQKG
Trigger: CCCTTTCTGCCAAGAAGGCCAGCACCCTGTGGAGGG...GCACATGCCTTCACGGGCAGGGTATGTTCCTTTTCTTCTCGGGGTGTTGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR CCA 90 bp AAAGCCCCAAGCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCTTGATCATACAGCCCTGGCTCTATaGACGGGCCAAGTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KAPSSGGFHSRESAPLDHTALAL*TGQVEA
Trigger: TGCCTCCACTTGGCCCGTCCATAGAGCCAGGGCTGT...ATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGCTTGGGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp CCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCCTGACAGAGAGAAACACGTCCCTGGGGGCTTaGGGGTACTGGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: PCLQEAAEQTTVVLTERNTSLGA*GYWTAM
Trigger: CATTGCTGTCCAGTACCCCCAAGCCCCCAGGGACGT...GTTTCTCTCTGTCAGGACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp AAGAGCAGCCAGAAAGCCCCAAGCTCTGGAGGCTTCCACTCTCGTGAATCAGCAGGGCTCACTGGCCTCTaGCAACTGGTGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: KSSQKAPSSGGFHSRESAGLTGL*QLVWKR
Trigger: TCTCTTCCACACCAGTTGCCAGAGGCCAGTGAGCCC...TGCTGATTCACGAGAGTGGAAGCCTCCAGAGCTTGGGGCTTTCTGGCTGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp CCGCTTGATCATCCTGCCCGTGAAGGCATGTGCTTTCCCTTCCAGATAAGTTACCTGCTGCTCGCGTGGTaGCCGTCCGTAACACATCCC +
Preference number: 4 (lower is better)
Translates to: PLDHPAREGMCFPFQISYLLLAW*PSVTHP
Trigger: GGGATGTGTTACGGACGGCCACCACGCGAGCAGCAG...GTAACTTATCTGGAAGGGAAAGCACATGCCTTCACGGGCAGGATGATCAAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp AGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCGGGCTTGGCACTCCTTaGGCATTTGAGATGCCCATC +
Preference number: 4 (lower is better)
Translates to: SQSTEARPSSLNIQRLVRGLGTP*AFEMPI
Trigger: GATGGGCATCTCAAATGCCCAAGGAGTGCCAAGCCC...GCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAAGGAAGCGGTCTGTGGACACTaGTACCGGGAGAGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: PTPNSLCSPGQLRATHKEAVCGH*YRESSY
Trigger: GTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGC...TTCCTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp TCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCTTTCTCTTGCAGGGCTaGTCGGGAATGTCACCAAAG +
Preference number: 4 (lower is better)
Translates to: SREGTPCLQEAAEQTTVVFLLQG*SGMSPK
Trigger: CTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAA...GACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp CCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAAGGGAGAGGTGGCTGGGTaGGGTCACCTCTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: PPTPNSLCSPGQLRATHKGEVAG*GHLFLS
Trigger: AGAAAGGAAGAGGTGACCCCACCCAGCCACCTCTCC...CTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp GCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATATTGCACCAAGATCTTaGCAACACGTGGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: ATSAHTHTVVSLAGLVGNIAPRS*QHVGLP
Trigger: GGGGAGCCCCACGTGTTGCCAAGATCTTGGTGCAAT...ATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR CAA 72 bp CCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGTTATaGCAGCTGCAAGGGAAGCTACAGCACAGTCGTCTC +
Preference number: 4 (lower is better)
Translates to: PKASTSVKTCGL*QLQGKLQHSRL
Trigger: GAGACGACTGTGCTGTAGCTTCCCTTGCAGCTGCAATAACCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR CAA 72 bp GCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCTaGATCATCCTGCCCGTGAAGGCATGTGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: ALEASTLVNQHR*IILPVKACAFP
Trigger: AGGGAAAGCACATGCCTTCACGGGCAGGATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589225.5
ENST00000591052.5
CDS-3UTR TCA 90 bp ATGAGAAGGCACAGCCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTCAATGTGGTTCTGCATaGCACACAGCATGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: MRRHSLAKMSSRCAATSAQCGSA*HTACRS
Trigger: GCTTCTGCATGCTGTGTGTCATGCAGAACCACATTG...AGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGGCTGTGCCTTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp TCTAGAGAAGCCTCAAAGCCTCTGTGTTGGGCGGTCTGTGGACACTGGTACCGGGGAGCACTTCACGCGTaGTCTGAGATACCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SREASKPLCWAVCGHWYRGALHA*SEIPSK
Trigger: TTTGGAGGGTATCTCAGATCACGCGTGAAGTGCTCC...CCGGTACCAGTGTCCACAGACCGCCCAACACAGAGGCTTTGAGGCTTCTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp GATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTAGCCAGGAGCTTAGGTaGGGTAGAGAGGACAACATC +
Preference number: 4 (lower is better)
Translates to: DVQQVCGHLCSHTHCRFSSQELR*GREDNI
Trigger: GATGTTGTCCTCTCTACCTCACCTAAGCTCCTGGCT...AGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp GGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCCTGACAGAGCACTCCTTGGGCATTTaGGATGCCCATCCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: GTPCLQEAAEQTTVVLTEHSLGI*DAHPLL
Trigger: TAGAAGAGGATGGGCATCTCAAATGCCCAAGGAGTG...CTCTGTCAGGACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR TCA 90 bp CACACACACCCCCACCTCACCCTTACACCCACCCCCTCGGAACCGACCTCCTTCTATCAGATGAGTATTTaGGCAGTTCCTGGACCACAT +
Preference number: 4 (lower is better)
Translates to: HTHPHLTLTPTPSEPTSFYQMSI*AVPGPH
Trigger: ATGTGGTCCAGGAACTGCTCAAATACTCATCTGATA...GAAGGAGGTCGGTTCCGAGGGGGTGGGTGTAAGGGTGAGGTGGGGGTGTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR TCA 90 bp GTCCTGACAGAGAGAAACGAGACCCGAATCTTCCCACTGCCACCCTCGGGTATGATGCCCTTCTCCAAGTaGCCAGAACACATGCCACAG +
Preference number: 4 (lower is better)
Translates to: VLTERNETRIFPLPPSGMMPFSK*PEHMPQ
Trigger: CTGTGGCATGTGTTCTGGTCACTTGGAGAAGGGCAT...CATACCCGAGGGTGGCAGTGGGAAGATTCGGGTCTCGTTTCTCTCTGTCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR TCA 90 bp CTCTGTGTTGGGCGGTCTGTGGACACTGGTACCGGGAGAGCTCCTACCGTGACAACAGACCACTGTCTATaGAACATGAGAAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: LCVGRSVDTGTGRAPTVTTDHCL*NMRRHS
Trigger: GCTGTGCCTTCTCATGTTTCATAGACAGTGGTCTGT...TGTCACGGTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGCCCAACACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp GAAGGCATGTGCTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCACAGGAGAGGGCACCCTaGGCAGCTCCACTCACTGCT +
Preference number: 4 (lower is better)
Translates to: EGMCFPFQISYKARARKPQERAP*AAPLTA
Trigger: AGCAGTGAGTGGAGCTGCTCAGGGTGCCCTCTCCTG...TGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCACATGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000542802.7
ENST00000587379.1
ENST00000589225.5
ENST00000591052.5
ENST00000592231.5
CDS-3UTR TCA 90 bp ACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCAGGAACTGTTTTCTTTGGTCTaGACCTATGAACTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: TKPPRTSRTSPETALSQELFSLV*TYELRN
Trigger: ATTCCTGAGTTCATAGGTTCAGACCAAAGAAAACAG...TTCCTGGGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp AAGAGCAGCCAGAAAGCCCCAAGCTCTGGAGGCTTCCACTCTCGTGAATCAGCATGCATCACTGGGATGTaGAGACTTGGGCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: KSSQKAPSSGGFHSRESACITGM*RLGPAV
Trigger: GACAGCAGGCCCAAGTCTGCACATCCCAGTGATGCA...TGCTGATTCACGAGAGTGGAAGCCTCCAGAGCTTGGGGCTTTCTGGCTGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp ACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCTTCCCTGGTGGCAGCTaGGAGCATGCTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: TVVSLAGLVGNVTKEVPIFPGGS*EHAPWR
Trigger: TCTCCAAGGAGCATGCTCGCAGCTGCCACCAGGGAA...GATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp GCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGATCCACTCAGGACATCTaGTTTCACAAAAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: AAEPTQRAPSDPDRQLPGSTQDI*FHKKFQ
Trigger: CTGGAACTTTTTGTGAAAGCAGATGTCCTGAGTGGA...TCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp GAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGTCCACTCAGGACATCTaGTTTCACAAAAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: ELPQIQTDSSREGTPCLQSTQDI*FHKKFQ
Trigger: CTGGAACTTTTTGTGAAAGCAGATGTCCTGAGTGGA...CTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp GCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCTTGATCATCCTGCCCGTGATCTCTTCAGTGGTGTaGGGCTTCTTCATCGTCCCA +
Preference number: 4 (lower is better)
Translates to: ALEASTLVNQHRLIILPVISSVV*GFFIVP
Trigger: TGGGACGATGAAGAAGCCGCACACCACTGAAGAGAT...CACGGGCAGGATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp CCACCCAACAGTGATAAACGCTGCAGAAAGTCATCTCGTGCTCACCACTGCCCATGCTGCTATTCGAGTTaGTGGTCCCAGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PPNSDKRCRKSSRAHHCPCCYSS*WSQAAP
Trigger: AGGGGCTGCCTGGGACCAGCAACTCGAATAGCAGCA...TGGGCAGTGGTGAGCACGAGATGACTTTCTGCAGCGTTTATCACTGTTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR GCA 90 bp AGGAGGTCTAAGTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGTTTGGCTCCCAGATCTaGTGCTATTCGAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RRSKSNTTLSISTCDDSGFGSQI*CYSSCW
Trigger: CCAGCAACTCGAATAGCAGCAGATCTGGGAGCCAAA...CCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGACTTAGACCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGTTCCCCTTCAGCCCATaGCCGTTGGCAGTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: LTHTLSFLLQGWSGMSPKFPFSP*PLAVAV
Trigger: TACAGCCACTGCCAACGGGCATGGGCTGAAGGGGAA...CTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp AAAGCCCCAAGCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCTTGATCATGTGGAGGAGACATGGTaGTTGCAGGCTCAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KAPSSGGFHSRESAPLDHVEETW*LQAQWW
Trigger: CCACCACTGAGCCTGCAAGCACCATGTCTCCTCCAC...ATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGCTTGGGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp ATGCGGCTGGCAAGAAGTCACCCTTCTGCAAGTGACTGGGACACATGCCAGATATCGCCCTCCACAGGGTaGTGGCCTTCTTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: MRLARSHPSASDWDTCQISPSTG*WPSWQK
Trigger: TTTCTGCCAAGAAGGCCAGCACCCTGTGGAGGGCGA...TATCTGGCATGTGTCCCAGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp CAGCCTGGAAAGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATCCCATCCTCTTCTACTaGCCGCTGTGTCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: QPGKQMYSQVSRAPPTPNPILFY*PLCLLL
Trigger: AAGCAGGAGACACAGCGGGCAGTAGAAGAGGATGGG...ATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCTTTCCAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp TCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGTGAGGCTGGCAGCCTTTaGTGGGTGAGTCACAGACCA +
Preference number: 4 (lower is better)
Translates to: SLNKSPLGALFVCWEHTGEAGSL*WVSHRP
Trigger: TGGTCTGTGACTCACCCAGCAAAGGCTGCCAGCCTC...ACCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587010.5
ENST00000588130.5
ENST00000589225.5
CDS-3UTR GCA 90 bp TGTTCGTGTGCTGGGAACACACAGGTCAATGAAGAGCAGCCAGAAAGCCCCAAGGAGGCTGGCAGCCTTTaGTGGGTGAGTCACAGACCA +
Preference number: 4 (lower is better)
Translates to: CSCAGNTQVNEEQPESPKEAGSL*WVSHRP
Trigger: TGGTCTGTGACTCACCCAGCAAAGGCTGCCAGCCTC...CTTGGGGCTTTCTGGCTGCTCTTCATTGACCTGTGTGTTCCCAGCACACGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587010.5
ENST00000588130.5
ENST00000589225.5
CDS-3UTR GCA 90 bp GTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGAGGAAATGACGCACCCAACACACATGTaGCAGATACACAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: VQHHVVHLHLRRLREEMTHPTHM*QIHSPH
Trigger: ATGTGGGCTGTGTATCTGGCACATGTGTGTTGGGTG...CGTCATTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp CCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAAGGAACTCACAAGGAAGGGGTaGACAGTAGGGCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: PTPNSLCSPGQLRATHKELTRKG*TVGPPS
Trigger: AGAGGGTGGCCCTACTGTGCACCCCTTCCTTGTGAG...TTCCTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CAAGCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCTTGATCATCCTGCCCGCGGGTTATTGCAGCTaGAAGGGAAGCTACAGCACA +
Preference number: 4 (lower is better)
Translates to: QALEASTLVNQHRLIILPAGYCS*KGSYST
Trigger: TGTGCTGTAGCTTCCCTTGCAGCTGCAATAACCCGC...GGGCAGGATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp GCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCTTGATCATCCTGCCCGTGACCTCAGTGAAGACCTaGGGGTTATTGCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: ALEASTLVNQHRLIILPVTSVKT*GLLQLQ
Trigger: TTGCAGCTGCAATAACCCGCAGGTCTTCACTGAGGT...CACGGGCAGGATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp CTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTAGCAGCTCCACTCACTaGTGCTGGGACACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSLPDKLQSQSTEARPSSSSSTH*CWDTGG
Trigger: GCCACCTGTGTCCCAGCAGCAGTGAGTGGAGCTGCT...AGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000542802.7
ENST00000587379.1
ENST00000589225.5
ENST00000591052.5
ENST00000592231.5
CDS-3UTR GCA 90 bp TGCCGCCACCACAGCCACCCGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTACATATAAATTATACTaGAGAGACCTCATTCCTACC +
Preference number: 4 (lower is better)
Translates to: CRHHSHPILPSRPGPAGRTYKLY*RDLIPT
Trigger: GGTAGGAATGAGGTCTCTGCAGTATAATTTATATGT...ACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCGGGTGGCTGTGGTGGCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp AGCTTCCCTGGTGGCAGCTGCGAGCATGCTCCTTGGAGAGCAGGTAGTTGGCTAGAATGTAAGCGCTCCTaGACTGTGGCCTGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: SFPGGSCEHAPWRAGSWLECKRS*TVACSN
Trigger: GTTTGAACAGGCCACAGTCCAGGAGCGCTTACATTC...TAGCCAACTACCTGCTCTCCAAGGAGCATGCTCGCAGCTGCCACCAGGGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR CCA 90 bp CTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGTCAACAGAAGCTTCCCTGGTaGCAGCTGCGAGCATGCTCC +
Preference number: 4 (lower is better)
Translates to: LNKSPLGALFVCWEHTGQQKLPW*QLRACS
Trigger: GGAGCATGCTCGCAGCTGCCACCAGGGAAGCTTCTG...TTGACCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp ATGAGAAGGCACAGCCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTAAGGCCTGGACAATGTaGTTCTGCATGACACACAGC +
Preference number: 4 (lower is better)
Translates to: MRRHSLAKMSSRCAATSAKAWTM*FCMTHS
Trigger: GCTGTGTGTCATGCAGAACCACATTGTCCAGGCCTT...AGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGGCTGTGCCTTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGGGATCACCATTATTCTaGGACATATACGGACGTATG +
Preference number: 4 (lower is better)
Translates to: SLRSRPTAPGKGRLVSRRGSPLF*DIYGRM
Trigger: CATACGTCCGTATATGTCCCAGAATAATGGTGATCC...CCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGGGATCACCATTATTCTaGGACATATACGGACGTATG +
Preference number: 4 (lower is better)
Translates to: SPEKQGMACPEPPAMHREGSPLF*DIYGRM
Trigger: CATACGTCCGTATATGTCCCAGAATAATGGTGATCC...CTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGTTGACGTTGCTGGAATaGACCAAGGAATCATTCATC +
Preference number: 4 (lower is better)
Translates to: LPQIQTDSSREGTPCLQELTLLE*TKESFI
Trigger: GATGAATGATTCCTTGGTCCATTCCAGCAACGTCAA...CTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGAGGAAATGACGCACCAATCTCTTCAGTaGTGTGCGGCTTCTTCATCG +
Preference number: 4 (lower is better)
Translates to: VQHHVVHLHLRRLREEMTHQSLQ*CAASSS
Trigger: CGATGAAGAAGCCGCACACCACTGAAGAGATTGGTG...CGTCATTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TCTAGAGAAGCCTCAAAGCCTCTGTGTTGGGCGGTCTGTGGACACTGGTACCGGGGGTGGAGCCATTCCTaGATATGGGCACACCAATCT +
Preference number: 4 (lower is better)
Translates to: SREASKPLCWAVCGHWYRGWSHS*IWAHQS
Trigger: AGATTGGTGTGCCCATATCCAGGAATGGCTCCACCC...CCGGTACCAGTGTCCACAGACCGCCCAACACAGAGGCTTTGAGGCTTCTCTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGGAATGCAAGTCAACACCCCGAGAAGAAAAGGAACATACCCTGCCCGTGAAGGGAATGCAGCCGTTCTaGGACTTCAGGCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: QECKSTPREEKEHTLPVKGMQPF*DFRPRV
Trigger: CACCCTGGGCCTGAAGTCCCAGAACGGCTGCATTCC...CTTCACGGGCAGGGTATGTTCCTTTTCTTCTCGGGGTGTTGACTTGCATTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR CCA 90 bp AGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCGTGCTGTGGAGGAGCTaGCTTCTTCACCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SQSTEARPSSLNIQRLVRVLWRS*LLHLLS
Trigger: GGAAAGAAGGTGAAGAAGCCAGCTCCTCCACAGCAC...GCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp ATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGTCAATGAAGAGCTTGCAGGCTCAGTGGTaGTGTTGCTCAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: ISVRGTVRVLGTHRSMKSLQAQW*CCSGQG
Trigger: CCCCTGTCCTGAGCAACACCACCACTGAGCCTGCAA...GCTCTTCATTGACCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp TTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGCAGCGCCGTCGAGATaGAGGAGCAGCTCCGTGGTT +
Preference number: 4 (lower is better)
Translates to: LQSQSTEARPSSLNIQRLAAPSR*RSSSVV
Trigger: AACCACGGAGCTGCTCCTCCATCTCGACGGCGCTGC...CAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGATATACACACAACCCACATCCCACACACACCCCACACATGCCCTTCTCCAACCTCCCTCCTGTACATaGGGCTCCCAGGCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: QIYTQPTSHTHPTHALLQPPSCT*GSQAVS
Trigger: AGAGACAGCCTGGGAGCCCCATGTACAGGAGGGAGG...TTGGAGAAGGGCATGTGTGGGGTGTGTGTGGGATGTGGGTTGTGTGTATATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp TCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTTTTTCTTTTTCCTTaGAGACTCTTCCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: SLRSRPTAPGKGRLVSRRLFLFP*RLFHGL
Trigger: GAGGCCATGGAAGAGTCTCCAAGGAAAAAGAAAAAG...CCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGTTATTGCCAGCCATTCGCGGATaGTGCGCAGCTGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: NGEFYPKASTSVKTCGLLPAIRG*CAAAGL
Trigger: GAGTCCAGCAGCTGCGCACCATCCGCGAATGGCTGG...CAATAACCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGCCACACTGAAGGAGGTCTAAGTCCAACACCACGTTGTCCATCTCCACCTGCGTCAAAGCCTCTGTGTTaGGCGGTCTGTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: SHTEGGLSPTPRCPSPPASKPLC*AVCGHW
Trigger: CCAGTGTCCACAGACCGCCCAACACAGAGGCTTTGA...CGCAGGTGGAGATGGACAACGTGGTGTTGGACTTAGACCTCCTTCAGTGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp TCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGCCGAGAAGCAAGGGATaGCTTGCCCAGAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: SLPDKLQSQSTEARPSSLPRSKG*LAQSHQ
Trigger: CTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGG...CAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp AGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCTAGAGAAGCCTCAAAGCAAAGGGAGAGGTGGCTaGGTGGGGTCACCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RAGRECHQRGSDLEKPQSKGRGG*VGSPLP
Trigger: AGGAAGAGGTGACCCCACCCAGCCACCTCTCCCTTT...GCTTTGAGGCTTCTCTAGATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp AGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATAGCCTCTGCTCTGCTGGGACACAGGTaGCCACAGGAGCTTGATTCT +
Preference number: 4 (lower is better)
Translates to: SRCIRRYRGLLRPQIASALLGHR*PQELDS
Trigger: AGAATCAAGCTCCTGTGGCCACCTGTGTCCCAGCAG...AGCAGAGGCTATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
3UTR CAA 72 bp TTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTaGAACATTCAGAGACTGGTCCGCAGGAGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LQSQSTEARPSS*NIQRLVRRRGH
Trigger: GTGCCCTCTCCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000542802.7
ENST00000587379.1
ENST00000589225.5
ENST00000591052.5
ENST00000592231.5
CDS-3UTR TCA 90 bp AAGAGGTTCCGATCTAGAGAAGCCTCAAAGCCTCTGTGTTGGGCGGTCTGTGGAATCTTAACGGAGGGCTaGGTTTGGTTGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: KRFRSREASKPLCWAVCGILTEG*VWLGRC
Trigger: GCACCTGCCCAACCAAACTCAGCCCTCCGTTAAGAT...TCCACAGACCGCCCAACACAGAGGCTTTGAGGCTTCTCTAGATCGGAACCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGACTGGATGGTGGCATTaGGAAAGCAGGTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: QSTEARPSSLNIQRLVRRTGWWH*ESRCCQ
Trigger: TTGGCAACACCTGCTTTCTCAATGCCACCATCCAGT...CCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp ACAGCAGCCTGGAAAGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCATGTTCTTCTTGGAGTaGTCTGGAATCACACTCGGG +
Preference number: 4 (lower is better)
Translates to: TAAWKADVFAGIEGSSDPMFFLE*SGITLG
Trigger: CCCGAGTGTGATTCCAGATCACTCCAAGAAGAACAT...GGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCTTTCCAGGCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp GTCCTGACAGAGAGAAACGAGACCCGAATCTTCCCACTGCCACCCTCGGGTATGAAGTTCCGTCGAGTCTaGAGTTTCTGGAAGGCGTTG +
Preference number: 4 (lower is better)
Translates to: VLTERNETRIFPLPPSGMKFRRV*SFWKAL
Trigger: CAACGCCTTCCAGAAACTTCAGACTCGACGGAACTT...CATACCCGAGGGTGGCAGTGGGAAGATTCGGGTCTCGTTTCTCTCTGTCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR TCA 90 bp CAAGCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCTTGATCATCTCCTTCGCAGCCTTTGCTGGGTaGGTCACAGACCAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: QALEASTLVNQHRLIISFAAFAG*VTDQKF
Trigger: GAACTTCTGGTCTGTGACTCACCCAGCAAAGGCTGC...GAAGGAGATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588130.5
CDS-3UTR TCA 90 bp ATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACACAGACCACTGTCTATaGAACATGAGAAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: IRRYRGLLRPQIASALQDTDHCL*NMRRHS
Trigger: GCTGTGCCTTCTCATGTTTCATAGACAGTGGTCTGT...GTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp CTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTGGTAAGGCCAACAGATaGAGGGGTCCCGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: LSLPDKLQSQSTEARPSSGKANR*RGPAEE
Trigger: TTCCTCAGCGGGACCCCTTCATCTGTTGGCCTTACC...AGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp CGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGCACTCACAAAATTaGGCAAACAAAGCCACTATT +
Preference number: 4 (lower is better)
Translates to: RSRAHTESSLRSRPTAPGKHSQN*ANKATI
Trigger: AATAGTGGCTTTGTTTGCTCAATTTTGTGAGTGCTT...CCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp TCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCCACTTCCCACTACTATaGGGGCATTTGTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: SREGTPCLQEAAEQTTVVHFPLL*GHLSFS
Trigger: GGAAAAAGACAAATGCCCTCATAGTAGTGGGAAGTG...GACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp CAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCCGGGGACAGACCCGATaGGGAAGGATGTTCACGGTC +
Preference number: 4 (lower is better)
Translates to: QVYIQSLNKSPLGALFVCRGQTR*GRMFTV
Trigger: GACCGTGAACATCCTTCCTCATCGGGTCTGTCCCCG...GCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAATATACACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR TCA 90 bp CCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAAGGAATGGAGGGAAGGGACGTaGCTCCACCCAACAGTGATA +
Preference number: 4 (lower is better)
Translates to: PTPNSLCSPGQLRATHKEWREGT*LHPTVI
Trigger: TATCACTGTTGGGTGGAGTCACGTCCCTTCCCTCCA...TTCCTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR GCA 90 bp CACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATGTTTGGTTGGGCAGGTaGTACGCGGAGCTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: HCRFSCRAGRECHQRGSDVWLGR*YAELLN
Trigger: ATTCAGGAGCTCCGCGTAGCACCTGCCCAACCAAAC...ATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp AAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGCATCAGCCGAGTCCTTaGGGCCGGGTTTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: KINGEFYPKASTSVKTCGHQPSP*GRVSGP
Trigger: AGGCCCTGAAACCCGGCCGCAAGGACTCGGCTGATG...CCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp ATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACTGCTGCTATTCGAGTTaGTGGTCCCAGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: IQSLNKSPLGALFVCWEHCCYSS*WSQAAP
Trigger: AGGGGCTGCCTGGGACCAGCAACTCGAATAGCAGCA...GTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp CAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCAGAGGACAACATCCCTaGTGTCCCAGGAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QVYIQSLNKSPLGALFVCRGQHP*CPRSPA
Trigger: GGCAGGGCTCCTGGGACAGCAGGGATGTTGTCCTCT...GCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAATATACACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp CACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGAGAGGACCCCAAATAGCCTCTaGTCTCCAGGACAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: HGSQALIFEHSETGPQERTPNSL*SPGQLR
Trigger: TCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGT...CCTCTCCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAAGAGACCTGCGGGTTATTaGAGCTGCAAGGGAAGCTAC +
Preference number: 4 (lower is better)
Translates to: PPTPNSLCSPGQLRATHKRPAGY*SCKGSY
Trigger: GTAGCTTCCCTTGCAGCTGCAATAACCCGCAGGTCT...CTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp TTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGAGCAGCTCCACTCACTaGTGCTGGGACACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LQSQSTEARPSSLNIQRLSSSTH*CWDTGG
Trigger: GCCACCTGTGTCCCAGCAGCAGTGAGTGGAGCTGCT...CAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000542802.7
ENST00000587379.1
ENST00000589225.5
ENST00000591052.5
ENST00000592231.5
CDS-3UTR GCA 90 bp AGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCGCCCGTGAAGGCATGTaGTTTCCCTTCCAGATAAGT +
Preference number: 4 (lower is better)
Translates to: SQSTEARPSSLNIQRLVRAREGM*FPFQIS
Trigger: ACTTATCTGGAAGGGAAAGCACATGCCTTCACGGGC...GCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000542802.7
ENST00000587379.1
ENST00000589225.5
ENST00000591052.5
ENST00000592231.5
CDS-3UTR CCA 90 bp CCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAAGGAAAGCGCTCCTGGACTGTaGCCTGTTCAAACACCGAAG +
Preference number: 4 (lower is better)
Translates to: PTPNSLCSPGQLRATHKESAPGL*PVQTPK
Trigger: CTTCGGTGTTTGAACAGGCCACAGTCCAGGAGCGCT...TTCCTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTAGGGCTGAGTTTGGTTaGGCAGGTGCTACGCGGAGC +
Preference number: 4 (lower is better)
Translates to: VTKPEHGSQALIFEHSETRAEFG*AGATRS
Trigger: GCTCCGCGTAGCACCTGCCCAACCAAACTCAGCCCT...AGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TCAATGAAGAGCAGCCAGAAAGCCCCAAGCTCTGGAGGCTTCCACTCTCGTGAAGAGACAGTCGCTCCGTaGGGAAAAGCACTTTCTGCG +
Preference number: 4 (lower is better)
Translates to: SMKSSQKAPSSGGFHSREETVAP*GKALSA
Trigger: CGCAGAAAGTGCTTTTCCCCACGGAGCGACTGTCTC...TTCACGAGAGTGGAAGCCTCCAGAGCTTGGGGCTTTCTGGCTGCTCTTCATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGAAGGCCTGGACAATGTaGTTCTGCATGACACACAGC +
Preference number: 4 (lower is better)
Translates to: QSTEARPSSLNIQRLVRRKAWTM*FCMTHS
Trigger: GCTGTGTGTCATGCAGAACCACATTGTCCAGGCCTT...CCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TGCTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATGGCAGGCTTTCTGCATaGCGTCGATGGTGTACCGCA +
Preference number: 4 (lower is better)
Translates to: CFPFQISYKARARKPGPHGRLSA*RRWCTA
Trigger: TGCGGTACACCATCGACGCCATGCAGAAAGCCTGCC...ATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACACGTTGGATGTTCTGTaGATGGTGAAGCGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: APPTPNSLCSPGQLRATHTLDVL*MVKRLL
Trigger: CAGCAAGCGCTTCACCATCCACAGAACATCCAACGT...GTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGAAGGAATCATTCATCTaGTACCACTGTCCATTGCTT +
Preference number: 4 (lower is better)
Translates to: LPQIQTDSSREGTPCLQEKESFI*YHCPLL
Trigger: AAGCAATGGACAGTGGTACCAGATGAATGATTCCTT...CTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGACTTTTCTTAGAGCCTaGAATTCGCAGATAGAACAG +
Preference number: 4 (lower is better)
Translates to: SLRSRPTAPGKGRLVSRRTFLRA*NSQIEQ
Trigger: CTGTTCTATCTGCGAATTCCAGGCTCTAAGAAAAGT...CCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAAGGAACTTCTTGGAGTGATCTaGAATCACACTCGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: PTPNSLCSPGQLRATHKELLGVI*NHTRAA
Trigger: GGCCGCCCGAGTGTGATTCCAGATCACTCCAAGAAG...TTCCTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GACGCGCCCACACCACACACACCACCCAACACACATGTGCCAGATACACAGCCCTGCCGATGTTCTTCTTaGAGTGATCTGGAATCACAC +
Preference number: 4 (lower is better)
Translates to: DAPTPHTPPNTHVPDTQPCRCSS*SDLESH
Trigger: GTGTGATTCCAGATCACTCCAAGAAGAACATCGGCA...GGGCTGTGTATCTGGCACATGTGTGTTGGGTGGTGTGTGTGGTGTGGGCGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp AGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCTAGAGAAGCCTCAAAGCGGGGGAAAAGTGCTGTaGAGGAGCTGGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RAGRECHQRGSDLEKPQSGGKVL*RSWLLH
Trigger: GTGAAGAAGCCAGCTCCTCCACAGCACTTTTCCCCC...GCTTTGAGGCTTCTCTAGATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGTTGGAGTGGCCAGCGGTaGAACAGTTCGTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: SLNKSPLGALFVCWEHTGWSGQR*NSSFPE
Trigger: CTCAGGAAACGAACTGTTCCACCGCTGGCCACTCCA...ACCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp ACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGAGGTTTTCATGGGGTaGGTGAGGTCGGAGGATGGT +
Preference number: 4 (lower is better)
Translates to: THCRFSCRAGRECHQRGSEVFMG*VRSEDG
Trigger: ACCATCCTCCGACCTCACCCACCCCATGAAAACCTC...GGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGTTATTGTATGGACGGGCCAAGTaGAGGCAACGACGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: NGEFYPKASTSVKTCGLLYGRAK*RQRRGE
Trigger: CTCACCCCGTCGTTGCCTCCACTTGGCCCGTCCATA...CAATAACCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AAGAGGTTCCGATCTAGAGAAGCCTCAAAGCCTCTGTGTTGGGCGGTCTGTGGAACACATCCCACCTGCTaGCCATTCACCTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: KRFRSREASKPLCWAVCGTHPTC*PFTCGC
Trigger: ACAGCCACAGGTGAATGGCCAGCAGGTGGGATGTGT...TCCACAGACCGCCCAACACAGAGGCTTTGAGGCTTCTCTAGATCGGAACCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp ACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCACCATCACCCATaGGAGAGCAGCTGTGCCGAA +
Preference number: 4 (lower is better)
Translates to: THCRFSCRAGRECHQRGSDHHHP*ESSCAE
Trigger: TTCGGCACAGCTGCTCTCCCATGGGTGATGGTGATC...GGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAAGGAAGATCACCATCACCCATaGGAGAGCAGCTGTGCCGAA +
Preference number: 4 (lower is better)
Translates to: PTPNSLCSPGQLRATHKEDHHHP*ESSCAE
Trigger: TTCGGCACAGCTGCTCTCCCATGGGTGATGGTGATC...TTCCTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGAGAGGTTGGAGACTCTTCCATaGCCTCTGGATCACCATCAC +
Preference number: 4 (lower is better)
Translates to: HGSQALIFEHSETGPQERLETLP*PLDHHH
Trigger: GTGATGGTGATCCAGAGGCCATGGAAGAGTCTCCAA...CCTCTCCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGATGGTGCGCAGCTGCTaGACTCGGGGACAACAGCAT +
Preference number: 4 (lower is better)
Translates to: SLPDKLQSQSTEARPSSLMVRSC*TRGQQH
Trigger: ATGCTGTTGTCCCCGAGTCCAGCAGCTGCGCACCAT...CAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTATTTGAGCAGTTCCTaGACCACATCAGACTCCCGC +
Preference number: 4 (lower is better)
Translates to: DVQQVCGHLCSHTHCRFSYLSSS*TTSDSR
Trigger: GCGGGAGTCTGATGTGGTCCAGGAACTGCTCAAATA...AGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCCTGACAGAGAGAAACCTGCTGGGACACAGGTaGCCACAGGAGCTTGATTCT +
Preference number: 4 (lower is better)
Translates to: PCLQEAAEQTTVVLTERNLLGHR*PQELDS
Trigger: AGAATCAAGCTCCTGTGGCCACCTGTGTCCCAGCAG...GTTTCTCTCTGTCAGGACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp CACTCTCGTGAATCAGCACCGCTTGATCATCCTGCCCGTGAAGGCATGTGCTTTCTGCTGGGACACAGGTaGCCACAGGAGCTTGATTCT +
Preference number: 4 (lower is better)
Translates to: HSRESAPLDHPAREGMCFLLGHR*PQELDS
Trigger: AGAATCAAGCTCCTGTGGCCACCTGTGTCCCAGCAG...AAAGCACATGCCTTCACGGGCAGGATGATCAAGCGGTGCTGATTCACGAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589225.5
ENST00000591052.5
CDS-3UTR CCA 90 bp GTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTTCCACTCACTGCTGCTaGGACACAGGTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: VTKPEHGSQALIFEHSETSTHCC*DTGGHR
Trigger: CCTGTGGCCACCTGTGTCCCAGCAGCAGTGAGTGGA...AGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000542802.7
ENST00000587379.1
ENST00000589225.5
ENST00000591052.5
ENST00000592231.5
CDS-3UTR CCA 90 bp ACAGCAGCCTGGAAAGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCTTTCCCTTCCCTATCTaGTTGATGACTTCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: TAAWKADVFAGIEGSSDPFPFPI*LMTSVE
Trigger: CTCCACCGAAGTCATCAACCAGATAGGGAAGGGAAA...GGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCTTTCCAGGCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR CCA 90 bp CACAGGTGCGGCCATGCAACCAGGACGCGGGGCAGGCAAGTGAGAGGACCTGGGGCTATGACAAAGGCTTaGGTTATTGACATTTACTTA +
Preference number: 4 (lower is better)
Translates to: HRCGHATRTRGRQVRGPGAMTKA*VIDIYL
Trigger: TAAGTAAATGTCAATAACCCAAGCCTTTGTCATAGC...CCCAGGTCCTCTCACTTGCCTGCCCCGCGTCCTGGTTGCATGGCCGCACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR CCA 90 bp CTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGAGGTGCAGAGGATaGGACACAGACCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: LTHTLSFLLQGWSGMSPKRRCRG*DTDLCT
Trigger: TGTGCAGAGGTCTGTGTCCCATCCTCTGCACCTCCT...CTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR CCA 90 bp AGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCTAGAGAAGCCTCAAAGCATTGCACCAAGATCTTaGCAACACGTGGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: RAGRECHQRGSDLEKPQSIAPRS*QHVGLP
Trigger: GGGGAGCCCCACGTGTTGCCAAGATCTTGGTGCAAT...GCTTTGAGGCTTCTCTAGATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR TCA 90 bp TGTGCTGGGAACACACAGGTCAATGAAGAGCAGCCAGAAAGCCCCAAGCTCTGGCAATGTGGTTCTGCATaGCACACAGCATGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: CAGNTQVNEEQPESPKLWQCGSA*HTACRS
Trigger: GCTTCTGCATGCTGTGTGTCATGCAGAACCACATTG...CCAGAGCTTGGGGCTTTCTGGCTGCTCTTCATTGACCTGTGTGTTCCCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR TCA 90 bp ATGAGAAGGCACAGCCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTTACCCTCCAAAAATTTaGTGGACCAAGGTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: MRRHSLAKMSSRCAATSAYPPKI*WTKVVA
Trigger: GGCTACTACCTTGGTCCATCAAATTTTTGGAGGGTA...AGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGGCTGTGCCTTCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp AGGAGGTCTAAGTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGTACCCTCCAAAAATTTaGTGGACCAAGGTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: RRSKSNTTLSISTCDDSGYPPKI*WTKVVA
Trigger: GGCTACTACCTTGGTCCATCAAATTTTTGGAGGGTA...CCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGACTTAGACCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATGGTTCAGAACCACCTTaGCGTTGCTGGAATGGACCA +
Preference number: 4 (lower is better)
Translates to: HCRFSCRAGRECHQRGSDGSEPP*RCWNGP
Trigger: TGGTCCATTCCAGCAACGTCAAGGTGGTTCTGAACC...ATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGATGTTCTTCTTGGAGTaGTCTGGAATCACACTCGGG +
Preference number: 4 (lower is better)
Translates to: QSTEARPSSLNIQRLVRRMFFLE*SGITLG
Trigger: CCCGAGTGTGATTCCAGATCACTCCAAGAAGAACAT...CCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp ACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGAACAGTTCGTTTCCTaGGAATCGCAGAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: THCRFSCRAGRECHQRGSEQFVS*ESQRWA
Trigger: GGCCCATCTCTGCGATTCTCAGGAAACGAACTGTTC...GGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CAGATATACACACAACCCACATCCCACACACACCCCACACATGCCCTTCTCCAAGCAGCCTTTGCTGGGTaGGTCACAGACCAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: QIYTQPTSHTHPTHALLQAAFAG*VTDQKF
Trigger: GAACTTCTGGTCTGTGACTCACCCAGCAAAGGCTGC...TTGGAGAAGGGCATGTGTGGGGTGTGTGTGGGATGTGGGTTGTGTGTATATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR TCA 90 bp GCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATACTGTCTATGAAACATaGGAAGGCACAGCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: ATSAHTHTVVSLAGLVGNTVYET*EGTAWQ
Trigger: TTGCCAGGCTGTGCCTTCTCATGTTTCATAGACAGT...ATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp AGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCACTGTCTATGAAACATaGGAAGGCACAGCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SQSTEARPSSLNIQRLVRTVYET*EGTAWQ
Trigger: TTGCCAGGCTGTGCCTTCTCATGTTTCATAGACAGT...GCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp TCTAGAGAAGCCTCAAAGCCTCTGTGTTGGGCGGTCTGTGGACACTGGTACCGGACAGACCACTGTCTATaGAACATGAGAAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: SREASKPLCWAVCGHWYRTDHCL*NMRRHS
Trigger: GCTGTGCCTTCTCATGTTTCATAGACAGTGGTCTGT...CCGGTACCAGTGTCCACAGACCGCCCAACACAGAGGCTTTGAGGCTTCTCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp TCAATGAAGAGCAGCCAGAAAGCCCCAAGCTCTGGAGGCTTCCACTCTCGTGAAGCTCTCCAGGACAGTTaGGAGCTACTCACAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SMKSSQKAPSSGGFHSREALQDS*ELLTRK
Trigger: CTTCCTTGTGAGTAGCTCTCAACTGTCCTGGAGAGC...TTCACGAGAGTGGAAGCCTCCAGAGCTTGGGGCTTTCTGGCTGCTCTTCATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR TCA 90 bp TCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGTCCAGGCCCTCATCTTTaGACATTCAGAGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: SLNKSPLGALFVCWEHTGPGPHL*TFRDWS
Trigger: GGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGG...ACCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589225.5
ENST00000591052.5
CDS-3UTR TCA 90 bp AGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGTTTCCAAGCTATAAGTaGAAAAAGCAGTCAGAACGG +
Preference number: 4 (lower is better)
Translates to: SRAHTESSLRSRPTAPGKFPSYK*KKQSER
Trigger: CCGTTCTGACTGCTTTTTTCACTTATAGCTTGGAAA...CTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587010.5
CDS-3UTR GCA 90 bp CTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGTCAAGGTAGGAGAAGCTCTTaGTGGCTGGCTCGAACTCGA +
Preference number: 4 (lower is better)
Translates to: LNKSPLGALFVCWEHTGQGRRSS*WLARTR
Trigger: TCGAGTTCGAGCCAGCCAGCAAGAGCTTCTCCTACC...TTGACCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp TTCACGGTCACCTTCACACTTCCCACTACTATGAGGGCATTTGTCTTTTTCCTGAAGGTTGTGGAGTCCTaGGCCCACGCGGAAGACCCG +
Preference number: 4 (lower is better)
Translates to: FTVTFTLPTTMRAFVFFLKVVES*AHAEDP
Trigger: CGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTT...CAGGAAAAAGACAAATGCCCTCATAGTAGTGGGAAGTGTGAAGGTGACCGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CATGTGCTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTTCAGGCAGGCTTTCTaGATGGCGTCGATGGTGTAC +
Preference number: 4 (lower is better)
Translates to: HVLSLPDKLQSQSTEARPFRQAF*MASMVY
Trigger: GTACACCATCGACGCCATGCAGAAAGCCTGCCTGAA...GGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CAGCCTGGAAAGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATGGTACCACTGTCCATTaGTTGCCTTCACGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: QPGKQMYSQVSRAPPTPNGTTVH*LPSRSS
Trigger: ACTGCTACGTGAAGGCAAGCAATGGACAGTGGTACC...ATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCTTTCCAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CATGCTACTCGTTTACAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGGGCTCTGGGCTGGAGCTaGTGGAGCCCCTCCTGTCGA +
Preference number: 4 (lower is better)
Translates to: HATRLQVYIQSLNKSPLGALGWS*WSPSCR
Trigger: TCGACAGGAGGGGCTCCAGCAGCTCCAGCCCAGAGC...CCCTAACGGAGATTTGTTCAGCGACTGAATATACACCTGTAAACGAGTAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp GAGAAACGAGACCCGAATCTTCCCACTGCCACCCTCGGGTATGAGTCCAACCTACACCGTCTTAGAATCTaGTCCACTTGGCGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: EKRDPNLPTATLGYESNLHRLRI*STWRRF
Trigger: AAAACGCCGCCAAGTGGAGCAGATTCTAAGACGGTG...TAGGTTGGACTCATACCCGAGGGTGGCAGTGGGAAGATTCGGGTCTCGTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp CAGCCTGGAAAGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATCACCGTCTTAGAATCTaGTCCACTTGGCGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: QPGKQMYSQVSRAPPTPNHRLRI*STWRRF
Trigger: AAAACGCCGCCAAGTGGAGCAGATTCTAAGACGGTG...ATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCTTTCCAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp AGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATAGCCTCTGCTCACCCAACACACATGTaGCAGATACACAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: SRCIRRYRGLLRPQIASAHPTHM*QIHSPH
Trigger: ATGTGGGCTGTGTATCTGGCACATGTGTGTTGGGTG...AGCAGAGGCTATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp GCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATAGTGACTGGGACACATaGCAGATATACACACAACCC +
Preference number: 4 (lower is better)
Translates to: ATSAHTHTVVSLAGLVGNSDWDT*QIYTQP
Trigger: GGGTTGTGTGTATATCTGGCATGTGTCCCAGTCACT...ATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp AGAAGAAAAGGAACATACCCTGCCCGTGAAGGCATGTGCTTTCCCTTCCAGATAGATGTCCAGCAGGTGTaGGGCCACCTCTGCTCACAC +
Preference number: 4 (lower is better)
Translates to: RRKGTYPAREGMCFPFQIDVQQV*GHLCSH
Trigger: GTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATC...TATCTGGAAGGGAAAGCACATGCCTTCACGGGCAGGGTATGTTCCTTTTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR GCA 90 bp ACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCAGACCTGCGGGTTATTaGAGCTGCAAGGGAAGCTAC +
Preference number: 4 (lower is better)
Translates to: TVVSLAGLVGNVTKEVPIRPAGY*SCKGSY
Trigger: GTAGCTTCCCTTGCAGCTGCAATAACCCGCAGGTCT...GATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGACCTGCGGGTTATTaGAGCTGCAAGGGAAGCTAC +
Preference number: 4 (lower is better)
Translates to: LTHTLSFLLQGWSGMSPKRPAGY*SCKGSY
Trigger: GTAGCTTCCCTTGCAGCTGCAATAACCCGCAGGTCT...CTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp AGTAGTAAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCCCCAGGGAGAGGGGGTaGAGACAGCGAGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SSKINGEFYPKASTSVKTPRERG*RQRGSH
Trigger: GTGGCTGCCTCGCTGTCTGCACCCCCTCTCCCTGGG...GGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTTACTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp GCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACTCTCGTGCTCACCACTaGCCAAGAGTTAACGAATGT +
Preference number: 4 (lower is better)
Translates to: APPTPNSLCSPGQLRATHSRAHH*PRVNEC
Trigger: ACATTCGTTAACTCTTGGGCAGTGGTGAGCACGAGA...GTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR GCA 90 bp CAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTAGTCAACCAAGTGACTaGTATGACAAAGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: QVCGHLCSHTHCRFSCRASQPSD*YDKGLG
Trigger: ACCCAAGCCTTTGTCATAGCAGTCACTTGGTTGACT...AGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR CCA 90 bp CAGCCTGGAAAGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATGAATGTAAGCGCTCCTaGACTGTGGCCTGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: QPGKQMYSQVSRAPPTPNECKRS*TVACSN
Trigger: GTTTGAACAGGCCACAGTCCAGGAGCGCTTACATTC...ATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCTTTCCAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAAGTGTCCTACTGCGGCATaGAACCAGGATCTTAACGGA +
Preference number: 4 (lower is better)
Translates to: PPTPNSLCSPGQLRATHKCPTAA*NQDLNG
Trigger: TCCGTTAAGATCCTGGTTCCATGCCGCAGTAGGACA...CTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp ATGAGAAGGCACAGCCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTCAACTTATCCACTATTaGCATGGTGCATCACTGGGA +
Preference number: 4 (lower is better)
Translates to: MRRHSLAKMSSRCAATSAQLIHY*HGASLG
Trigger: TCCCAGTGATGCACCATGCCAATAGTGGATAAGTTG...AGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGGCTGTGCCTTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGCTTCCCTGGTGGCAGCTGCGAGCATGCTCCTTGGAGAGCAGGTAGTTGGCTACAACTTATCCACTATTaGCATGGTGCATCACTGGGA +
Preference number: 4 (lower is better)
Translates to: SFPGGSCEHAPWRAGSWLQLIHY*HGASLG
Trigger: TCCCAGTGATGCACCATGCCAATAGTGGATAAGTTG...TAGCCAACTACCTGCTCTCCAAGGAGCATGCTCGCAGCTGCCACCAGGGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR CCA 90 bp GGAACCCAATGCATGGCATCTCGATGCGGCTGGCAAGAAGTCACCCTTCTGCAAAGGAGAAGCTCTTGCTaGCTGGCTCGAACTCGATTT +
Preference number: 4 (lower is better)
Translates to: GTQCMASRCGWQEVTLLQRRSSC*LARTRF
Trigger: AAATCGAGTTCGAGCCAGCCAGCAAGAGCTTCTCCT...TTGCAGAAGGGTGACTTCTTGCCAGCCGCATCGAGATGCCATGCATTGGGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp CACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATTCTGCATGGCGTCGATaGTGTACCGCAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: HCRFSCRAGRECHQRGSDSAWRR*CTAGTH
Trigger: ATGAGTTCCTGCGGTACACCATCGACGCCATGCAGA...ATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCGGATCACCATTATTCTaGGACATATACGGACGTATG +
Preference number: 4 (lower is better)
Translates to: SREGTPCLQEAAEQTTVVGSPLF*DIYGRM
Trigger: CATACGTCCGTATATGTCCCAGAATAATGGTGATCC...GACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp GGCATCTCGATGCGGCTGGCAAGAAGTCACCCTTCTGCAAGTGACTGGGACACAAGCCATTCCTGGATATaGGCACACCAATCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GISMRLARSHPSASDWDTSHSWI*AHQSLQ
Trigger: CTGAAGAGATTGGTGTGCCCATATCCAGGAATGGCT...TGTGTCCCAGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCATCGAGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp GAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGTCAATGACTTCAGGCCCAGGGTaGAGCCATTCCTGGATATGG +
Preference number: 4 (lower is better)
Translates to: EQISVRGTVRVLGTHRSMTSGPG*SHSWIW
Trigger: CCATATCCAGGAATGGCTCCACCCTGGGCCTGAAGT...CATTGACCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp ACAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGGGAATGCAGCCGTTCTaGGACTTCAGGCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TGVYSVAEQISVRGTVRVGMQPF*DFRPRV
Trigger: CACCCTGGGCCTGAAGTCCCAGAACGGCTGCATTCC...CACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAATATACACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp TCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGTGTGCTGTGGAGGAGCTaGCTTCTTCACCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SLNKSPLGALFVCWEHTGVLWRS*LLHLLS
Trigger: GGAAAGAAGGTGAAGAAGCCAGCTCCTCCACAGCAC...ACCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp AAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGGGCGGCGTTTTGGAGTaGCCAGCGGTGGAACAGTTC +
Preference number: 4 (lower is better)
Translates to: KINGEFYPKASTSVKTCGGGVLE*PAVEQF
Trigger: GAACTGTTCCACCGCTGGCCACTCCAAAACGCCGCC...CCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGTATGGACGGGCCAAGTaGAGGCAACGACGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: KINGEFYPKASTSVKTCGYGRAK*RQRRGE
Trigger: CTCACCCCGTCGTTGCCTCCACTTGGCCCGTCCATA...CCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGCCTCCCTCCTGTACATaGGGCTCCCAGGCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: KINGEFYPKASTSVKTCGPPSCT*GSQAVS
Trigger: AGAGACAGCCTGGGAGCCCCATGTACAGGAGGGAGG...CCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGGGACAACAGCATCTTaGGGCTTGGCACTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LQSQSTEARPSSLNIQRLGTTAS*GLALLG
Trigger: CCCAAGGAGTGCCAAGCCCCAAGATGCTGTTGTCCC...CAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGTTATTGATGGTGCGCAGCTGCTaGACTCGGGGACAACAGCAT +
Preference number: 4 (lower is better)
Translates to: NGEFYPKASTSVKTCGLLMVRSC*TRGQQH
Trigger: ATGCTGTTGTCCCCGAGTCCAGCAGCTGCGCACCAT...CAATAACCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGGGCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCCTTCTGCAAGTGACTaGGACACATGCCAGATATAC +
Preference number: 4 (lower is better)
Translates to: RAPPTPNSLCSPGQLRATPSASD*DTCQIY
Trigger: GTATATCTGGCATGTGTCCCAGTCACTTGCAGAAGG...AGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp AAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGGCGGTCTGTGGACACTaGTACCGGGAGAGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: KINGEFYPKASTSVKTCGAVCGH*YRESSY
Trigger: GTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGC...CCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp TTCACGGTCACCTTCACACTTCCCACTACTATGAGGGCATTTGTCTTTTTCCTGCACCGGGAGACCACCTaGGGGACATGTGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: FTVTFTLPTTMRAFVFFLHRETT*GTCGHH
Trigger: ATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTG...CAGGAAAAAGACAAATGCCCTCATAGTAGTGGGAAGTGTGAAGGTGACCGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp GAAGGCATGTGCTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAAAAGGGAGAGGTGGCTaGGTGGGGTCACCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: EGMCFPFQISYKARARKPKGRGG*VGSPLP
Trigger: AGGAAGAGGTGACCCCACCCAGCCACCTCTCCCTTT...TGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCACATGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp ACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCACTTGGAAGCCACAGGACTaGTCAAAAATAAATGTTTTG +
Preference number: 4 (lower is better)
Translates to: TSYAPGDHLGDMWPPSPTWKPQD*SKINVL
Trigger: CAAAACATTTATTTTTGACCAGTCCTGTGGCTTCCA...AGTGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp TGCTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTGCTGGGACACAGGTaGCCACAGGAGCTTGATTCT +
Preference number: 4 (lower is better)
Translates to: CFPFQISYKARARKPGPHLLGHR*PQELDS
Trigger: AGAATCAAGCTCCTGTGGCCACCTGTGTCCCAGCAG...ATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000542802.7
ENST00000587379.1
ENST00000589225.5
ENST00000591052.5
ENST00000592231.5
CDS-3UTR CCA 90 bp AGAAGAAAAGGAACATACCCTGCCCGTGAAGGCATGTGCTTTCCCTTCCAGATATCCACTCACTGCTGCTaGGACACAGGTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: RRKGTYPAREGMCFPFQISTHCC*DTGGHR
Trigger: CCTGTGGCCACCTGTGTCCCAGCAGCAGTGAGTGGA...TATCTGGAAGGGAAAGCACATGCCTTCACGGGCAGGGTATGTTCCTTTTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR CCA 90 bp GCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATTTTCCCTTCCCTATCTaGTTGATGACTTCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ATSAHTHTVVSLAGLVGNFPFPI*LMTSVE
Trigger: CTCCACCGAAGTCATCAACCAGATAGGGAAGGGAAA...ATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR CCA 90 bp AGGAGGTCTAAGTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGTTTGAACTCGTTTTCTaGGCCTCATCTTTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: RRSKSNTTLSISTCDDSGFELVF*ASSFPS
Trigger: GGAAGGGAAAGATGAGGCCCAGAAAACGAGTTCAAA...CCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGACTTAGACCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR TCA 90 bp CCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTACTTCACGCGTGATCTaGGATACCCTCCAAAAATTT +
Preference number: 4 (lower is better)
Translates to: PGKDVQQVCGHLCSHTHCTSRVI*DTLQKF
Trigger: AAATTTTTGGAGGGTATCTCAGATCACGCGTGAAGT...ACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp GGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAAACTTCACGCGTGATCTaGGATACCCTCCAAAAATTT +
Preference number: 4 (lower is better)
Translates to: GHLCSHTHCRFSCRAGRETSRVI*DTLQKF
Trigger: AAATTTTTGGAGGGTATCTCAGATCACGCGTGAAGT...TTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp AGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCTATACGGACGTATGTTaGGGAATTCCGGATAGCCTA +
Preference number: 4 (lower is better)
Translates to: SQSTEARPSSLNIQRLVRYTDVC*GIPDSL
Trigger: TAGGCTATCCGGAATTCCTCAACATACGTCCGTATA...GCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp AAGAGGTTCCGATCTAGAGAAGCCTCAAAGCCTCTGTGTTGGGCGGTCTGTGGAAAGTTCCGTCGAGTCTaGAGTTTCTGGAAGGCGTTG +
Preference number: 4 (lower is better)
Translates to: KRFRSREASKPLCWAVCGKFRRV*SFWKAL
Trigger: CAACGCCTTCCAGAAACTTCAGACTCGACGGAACTT...TCCACAGACCGCCCAACACAGAGGCTTTGAGGCTTCTCTAGATCGGAACCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp AAAGCCCCAAGCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCTTGATCATAAGTTCCGTCGAGTCTaGAGTTTCTGGAAGGCGTTG +
Preference number: 4 (lower is better)
Translates to: KAPSSGGFHSRESAPLDHKFRRV*SFWKAL
Trigger: CAACGCCTTCCAGAAACTTCAGACTCGACGGAACTT...ATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGCTTGGGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587010.5
ENST00000588130.5
ENST00000589225.5
CDS-3UTR TCA 90 bp AGCCACACTGAAGGAGGTCTAAGTCCAACACCACGTTGTCCATCTCCACCTGCGACTGTCTATGAAACATaGGAAGGCACAGCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SHTEGGLSPTPRCPSPPATVYET*EGTAWQ
Trigger: TTGCCAGGCTGTGCCTTCTCATGTTTCATAGACAGT...CGCAGGTGGAGATGGACAACGTGGTGTTGGACTTAGACCTCCTTCAGTGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp AAGAGCAGCCAGAAAGCCCCAAGCTCTGGAGGCTTCCACTCTCGTGAATCAGCAACAGACCACTGTCTATaGAACATGAGAAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: KSSQKAPSSGGFHSRESATDHCL*NMRRHS
Trigger: GCTGTGCCTTCTCATGTTTCATAGACAGTGGTCTGT...TGCTGATTCACGAGAGTGGAAGCCTCCAGAGCTTGGGGCTTTCTGGCTGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR TCA 90 bp CAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGCACTTCCCACTACTATaGGGGCATTTGTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: QSTEARPSSLNIQRLVRRHFPLL*GHLSFS
Trigger: GGAAAAAGACAAATGCCCTCATAGTAGTGGGAAGTG...CCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp GATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTCACTTCCCACTACTATaGGGGCATTTGTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: DVQQVCGHLCSHTHCRFSHFPLL*GHLSFS
Trigger: GGAAAAAGACAAATGCCCTCATAGTAGTGGGAAGTG...AGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp TTCACGGTCACCTTCACACTTCCCACTACTATGAGGGCATTTGTCTTTTTCCTGGTGCAGACTTGGGCCTaGTGTCCTACTGCGGCATGG +
Preference number: 4 (lower is better)
Translates to: FTVTFTLPTTMRAFVFFLVQTWA*CPTAAW
Trigger: CCATGCCGCAGTAGGACAGCAGGCCCAAGTCTGCAC...CAGGAAAAAGACAAATGCCCTCATAGTAGTGGGAAGTGTGAAGGTGACCGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCCTGACAGAGAGAAACCCACTATTGGCATGGTaGATCACTGGGATGTGCAGA +
Preference number: 4 (lower is better)
Translates to: PCLQEAAEQTTVVLTERNPLLAW*ITGMCR
Trigger: TCTGCACATCCCAGTGATGCACCATGCCAATAGTGG...GTTTCTCTCTGTCAGGACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp AACACCCCGAGAAGAAAAGGAACATACCCTGCCCGTGAAGGCATGTGCTTTCCCCCACTATTGGCATGGTaGATCACTGGGATGTGCAGA +
Preference number: 4 (lower is better)
Translates to: NTPRRKGTYPAREGMCFPPLLAW*ITGMCR
Trigger: TCTGCACATCCCAGTGATGCACCATGCCAATAGTGG...GGGAAAGCACATGCCTTCACGGGCAGGGTATGTTCCTTTTCTTCTCGGGGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR GCA 90 bp CACTCTCGTGAATCAGCACCGCTTGATCATCCTGCCCGTGAAGGCATGTGCTTTCCACTATTGGCATGGTaGATCACTGGGATGTGCAGA +
Preference number: 4 (lower is better)
Translates to: HSRESAPLDHPAREGMCFPLLAW*ITGMCR
Trigger: TCTGCACATCCCAGTGATGCACCATGCCAATAGTGG...AAAGCACATGCCTTCACGGGCAGGATGATCAAGCGGTGCTGATTCACGAGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp AAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGGGGAAAAGCACTTTCTaGGGGGCTGGGACTCCGTCA +
Preference number: 4 (lower is better)
Translates to: KINGEFYPKASTSVKTCGGKSTF*GAGTPS
Trigger: TGACGGAGTCCCAGCCCCGCAGAAAGTGCTTTTCCC...CCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp AAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGTACCGCAGGAACTCATaGGCGTCCTCCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: KINGEFYPKASTSVKTCGYRRNS*ASSWFP
Trigger: TGGGAACCAGGAGGACGCGCATGAGTTCCTGCGGTA...CCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATATCTCTTCAGTGGTGTaGGGCTTCTTCATCGTCCCA +
Preference number: 4 (lower is better)
Translates to: HCRFSCRAGRECHQRGSDISSVV*GFFIVP
Trigger: TGGGACGATGAAGAAGCCGCACACCACTGAAGAGAT...ATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp TTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGGCTCCCAGATCTGCTaGTATTCGAGTTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LQSQSTEARPSSLNIQRLGSQIC*YSSCWS
Trigger: GGACCAGCAACTCGAATAGCAGCAGATCTGGGAGCC...CAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp AATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGTTATTGGGCTCCCAGATCTGCTaGTATTCGAGTTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: NGEFYPKASTSVKTCGLLGSQIC*YSSCWS
Trigger: GGACCAGCAACTCGAATAGCAGCAGATCTGGGAGCC...CAATAACCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGTTTGGCTCCCAGATCTaGTGCTATTCGAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LTHTLSFLLQGWSGMSPKFGSQI*CYSSCW
Trigger: CCAGCAACTCGAATAGCAGCAGATCTGGGAGCCAAA...CTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTTTCCCCTTCAGCCCATaGCCGTTGGCAGTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: PDKLQSQSTEARPSSLNIFPFSP*PLAVAV
Trigger: TACAGCCACTGCCAACGGGCATGGGCTGAAGGGGAA...AATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp GTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGTAACACATCCCACCTaGTGGCCATTCACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VTKPEHGSQALIFEHSETVTHPT*WPFTCG
Trigger: GCCACAGGTGAATGGCCAGCAGGTGGGATGTGTTAC...AGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp GATTATTTGAGGCCAGGATCCTATACTGAGGGGGCACCTCTTTCAGTGTCTACAGAGGCTGGCAGCCTTTaGTGGGTGAGTCACAGACCA +
Preference number: 4 (lower is better)
Translates to: DYLRPGSYTEGAPLSVSTEAGSL*WVSHRP
Trigger: TGGTCTGTGACTCACCCAGCAAAGGCTGCCAGCCTC...TGTAGACACTGAAAGAGGTGCCCCCTCAGTATAGGATCCTGGCCTCAAATAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587379.1
CDS-3UTR GCA 90 bp CACTCTCGTGAATCAGCACCGCTTGATCATCCTGCCCGTGAAGGCATGTGCTTTACCCCAAATAGCCTCTaGTCTCCAGGACAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: HSRESAPLDHPAREGMCFTPNSL*SPGQLR
Trigger: TCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGT...AAAGCACATGCCTTCACGGGCAGGATGATCAAGCGGTGCTGATTCACGAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp GCTGTACACAGGCCCCACTCCCTCCAGCTCCATTCCCAAGCACAAAATTCAACAACCCCAAATAGCCTCTaGTCTCCAGGACAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: AVHRPHSLQLHSQAQNSTTPNSL*SPGQLR
Trigger: TCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGT...TGTTGAATTTTGTGCTTGGGAATGGAGCTGGAGGGAGTGGGGCCTGTGTACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR GCA 90 bp CCACCCAACAGTGATAAACGCTGCAGAAAGTCATCTCGTGCTCACCACTGCCCAACCTCAGTGAAGACCTaGGGGTTATTGCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PPNSDKRCRKSSRAHHCPTSVKT*GLLQLQ
Trigger: TTGCAGCTGCAATAACCCGCAGGTCTTCACTGAGGT...TGGGCAGTGGTGAGCACGAGATGACTTTCTGCAGCGTTTATCACTGTTGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR GCA 90 bp CAAGTCAACACCCCGAGAAGAAAAGGAACATACCCTGCCCGTGAAGGCATGTGCGCCCGTGAAGGCATGTaGTTTCCCTTCCAGATAAGT +
Preference number: 4 (lower is better)
Translates to: QVNTPRRKGTYPAREGMCAREGM*FPFQIS
Trigger: ACTTATCTGGAAGGGAAAGCACATGCCTTCACGGGC...GCACATGCCTTCACGGGCAGGGTATGTTCCTTTTCTTCTCGGGGTGTTGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR CCA 90 bp AGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCTAGAGAAGCCTCAAAGCGAATGTAAGCGCTCCTaGACTGTGGCCTGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: RAGRECHQRGSDLEKPQSECKRS*TVACSN
Trigger: GTTTGAACAGGCCACAGTCCAGGAGCGCTTACATTC...GCTTTGAGGCTTCTCTAGATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp ATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGTCAATGAAGAGCTGTCCTACTGCGGCATaGAACCAGGATCTTAACGGA +
Preference number: 4 (lower is better)
Translates to: ISVRGTVRVLGTHRSMKSCPTAA*NQDLNG
Trigger: TCCGTTAAGATCCTGGTTCCATGCCGCAGTAGGACA...GCTCTTCATTGACCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp GTCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGTATCCACTATTGGCATaGTGCATCACTGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: VAEQISVRGTVRVLGTHRYPLLA*CITGMC
Trigger: GCACATCCCAGTGATGCACCATGCCAATAGTGGATA...CCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp GCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATCAACTTATCCACTATTaGCATGGTGCATCACTGGGA +
Preference number: 4 (lower is better)
Translates to: ATSAHTHTVVSLAGLVGNQLIHY*HGASLG
Trigger: TCCCAGTGATGCACCATGCCAATAGTGGATAAGTTG...ATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGGAAGCTCTTGCTGGCTaGCTCGAACTCGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: LTHTLSFLLQGWSGMSPKEALAG*LELDFL
Trigger: CAGAAAATCGAGTTCGAGCCAGCCAGCAAGAGCTTC...CTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAAGTCAACACCCCGAGAAGAAAAGGAACATACCCTGCCCGTGAAGGCATGTGCGAAGCTCTTGCTGGCTaGCTCGAACTCGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: QVNTPRRKGTYPAREGMCEALAG*LELDFL
Trigger: CAGAAAATCGAGTTCGAGCCAGCCAGCAAGAGCTTC...GCACATGCCTTCACGGGCAGGGTATGTTCCTTTTCTTCTCGGGGTGTTGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR CCA 90 bp CTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCTTCATCTCCACTCTTGTaGCGACTAGCTCCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LSFLLQGWSGMSPKRFRSSSPLL*RLAPSV
Trigger: AACAGAGGGAGCTAGTCGCCACAAGAGTGGAGATGA...AGATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TGCTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTGTTGGCGAAGGCCTaGACAATGTGGTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: CFPFQISYKARARKPGPHLLAKA*TMWFCM
Trigger: CATGCAGAACCACATTGTCCAGGCCTTCGCCAACAG...ATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTCATGCGCGTCCTCCTaGTTCCCAAAGCGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: QVYIQSLNKSPLGALFVCSCASS*FPKRKC
Trigger: ACACTTCCGCTTTGGGAACCAGGAGGACGCGCATGA...GCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAATATACACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp CCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCCTGACAGAGAGAAACTTTGACGATCCAACTTaGCACAGCCATTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PCLQEAAEQTTVVLTERNFDDPT*HSHSGR
Trigger: CCTGCCTGAATGGCTGTGCCAAGTTGGATCGTCAAA...GTTTCTCTCTGTCAGGACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp GTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGAGGAAATGACGTTGACGTTGCTGGAATaGACCAAGGAATCATTCATC +
Preference number: 4 (lower is better)
Translates to: VQHHVVHLHLRRLREEMTLTLLE*TKESFI
Trigger: GATGAATGATTCCTTGGTCCATTCCAGCAACGTCAA...CGTCATTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGATGTGTGTGGGTGTCTaGGAGAGTTTGGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LQSQSTEARPSSLNIQRLMCVGV*ESLGEG
Trigger: CCCTTCCCCCAAACTCTCCCAGACACCCACACACAT...CAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGTTATTGCAGGGTCGTCTAGGATaGTTGGCATGTGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: NGEFYPKASTSVKTCGLLQGRLG*LACVWV
Trigger: CACCCACACACATGCCAACCATCCTAGACGACCCTG...CAATAACCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGCAGGGTCGTCTAGGATaGTTGGCATGTGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LQSQSTEARPSSLNIQRLQGRLG*LACVWV
Trigger: CACCCACACACATGCCAACCATCCTAGACGACCCTG...CAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GAAGGCATGTGCTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAAGAATCTGCTCCACTTaGCGGCGTTTTGGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: EGMCFPFQISYKARARKPRICST*RRFGVA
Trigger: GGCCACTCCAAAACGCCGCCAAGTGGAGCAGATTCT...TGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCACATGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CTGGGACACATGCCAGATATACACACAACCCACATCCCACACACACCCCACACATTGGAGACTCTTCCATaGCCTCTGGATCACCATCAC +
Preference number: 4 (lower is better)
Translates to: LGHMPDIHTTHIPHTPHTLETLP*PLDHHH
Trigger: GTGATGGTGATCCAGAGGCCATGGAAGAGTCTCCAA...TGTGTGGGGTGTGTGTGGGATGTGGGTTGTGTGTATATCTGGCATGTGTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CCA 90 bp ACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCTTGGAGACTCTTCCATaGCCTCTGGATCACCATCAC +
Preference number: 4 (lower is better)
Translates to: THCRFSCRAGRECHQRGSLETLP*PLDHHH
Trigger: GTGATGGTGATCCAGAGGCCATGGAAGAGTCTCCAA...GGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGTCAAAGCCTCTGTGTTaGGCGGTCTGTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: LQSQSTEARPSSLNIQRLSKPLC*AVCGHW
Trigger: CCAGTGTCCACAGACCGCCCAACACAGAGGCTTTGA...CAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp GTTGTCCATCTCCACCTGCGACGACTCCGGGAGGAAATGACGGGGACAGACCCGTGGAAGCCACAGGACTaGTCAAAAATAAATGTTTTG +
Preference number: 4 (lower is better)
Translates to: VVHLHLRRLREEMTGTDPWKPQD*SKINVL
Trigger: CAAAACATTTATTTTTGACCAGTCCTGTGGCTTCCA...CGGGTCTGTCCCCGTCATTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp CAACAGTGTCAAATCCCTGCCCGTGAAGGCATGTGCTTTCCCTTCCAGATAAGTCTGCTGGGACACAGGTaGCCACAGGAGCTTGATTCT +
Preference number: 4 (lower is better)
Translates to: QQCQIPAREGMCFPFQISLLGHR*PQELDS
Trigger: AGAATCAAGCTCCTGTGGCCACCTGTGTCCCAGCAG...ACTTATCTGGAAGGGAAAGCACATGCCTTCACGGGCAGGGATTTGACACTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587379.1
CDS-3UTR TCA 90 bp GTGACCAGAACACATGCCACAGATGCCAGGTGTACACACCCCACACCCAACACACCTCTGTTTTGGGGTTaGGCAACACATATTTGCTCT +
Preference number: 4 (lower is better)
Translates to: VTRTHATDARCTHPTPNTPLFWG*ATHICS
Trigger: AGAGCAAATATGTGTTGCTCAACCCCAAAACAGAGG...TGTGTTGGGTGTGGGGTGTGTACACCTGGCATCTGTGGCATGTGTTCTGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR TCA 90 bp ACATGCTACTCGTTTACAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGGTCAGCGGCGATAGCTaGGGCTGGCAGCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: TCYSFTGVYSVAEQISVRVSGDS*GWQPLL
Trigger: CAGCAAAGGCTGCCAGCCTCAGCTATCGCCGCTGAC...CCTAACGGAGATTTGTTCAGCGACTGAATATACACCTGTAAACGAGTAGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587010.5
ENST00000588130.5
ENST00000589225.5
ENST00000591052.5
CDS-3UTR TCA 90 bp ATGCGGCTGGCAAGAAGTCACCCTTCTGCAAGTGACTGGGACACATGCCAGATAACTGTCTATGAAACATaGGAAGGCACAGCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: MRLARSHPSASDWDTCQITVYET*EGTAWQ
Trigger: TTGCCAGGCTGTGCCTTCTCATGTTTCATAGACAGT...TATCTGGCATGTGTCCCAGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR TCA 90 bp TATACATGCTACTCGTTTACAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTATGAAGGGGTCCCGCTaGGGAAGCAGGGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: YTCYSFTGVYSVAEQISVMKGSR*GSRGGR
Trigger: CCGCCCTCCCCTGCTTCCTCAGCGGGACCCCTTCAT...AACGGAGATTTGTTCAGCGACTGAATATACACCTGTAAACGAGTAGCATGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR TCA 90 bp TTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGCCAGGCCCTCATCTTTaGACATTCAGAGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: LQSQSTEARPSSLNIQRLPGPHL*TFRDWS
Trigger: GGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGG...CAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000542802.7
ENST00000587379.1
ENST00000589225.5
ENST00000591052.5
ENST00000592231.5
CDS-3UTR TCA 90 bp CATCTTAGAGGAGCTCTCCAGGGTGCGGAGGTCAACAGTGTCAAATCCCTGCCCTTCAGTGGGATGTATTaGCTGGATCAGTTGATTCTG +
Preference number: 4 (lower is better)
Translates to: HLRGALQGAEVNSVKSLPFSGMY*LDQLIL
Trigger: CAGAATCAACTGATCCAGTCAATACATCCCACTGAA...GGGCAGGGATTTGACACTGTTGACCTCCGCACCCTGGAGAGCTCCTCTAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587379.1
CDS-3UTR GCA 90 bp CAGCAGACAACTAACATTTTCAACTACAGAACATCACACGGTAAACATGGCAGATCCTCCTCCGCTTCCTaGTGCTCGCGTGGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: QQTTNIFNYRTSHGKHGRSSSAS*CSRGGR
Trigger: ACGGCCACCACGCGAGCAGCAGGAAGCGGAGGAGGA...TCTGCCATGTTTACCGTGTGATGTTCTGTAGTTGAAAATGTTAGTTGTCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR GCA 90 bp ACATGCTACTCGTTTACAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGCAGAGCCACCAGCTATaGACCGGGAGACCACCTGGG +
Preference number: 4 (lower is better)
Translates to: TCYSFTGVYSVAEQISVRQSHQL*TGRPPG
Trigger: CCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTG...CCTAACGGAGATTTGTTCAGCGACTGAATATACACCTGTAAACGAGTAGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp CTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTACCTCAGTGAAGACCTaGGGGTTATTGCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LSLPDKLQSQSTEARPSSTSVKT*GLLQLQ
Trigger: TTGCAGCTGCAATAACCCGCAGGTCTTCACTGAGGT...AGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp GCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAACAGTGATAAACGCTaGAGAAAGTCATCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: APPTPNSLCSPGQLRATHNSDKR*RKSSRA
Trigger: AGCACGAGATGACTTTCTGCAGCGTTTATCACTGTT...GTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR GCA 90 bp AAGTATTTCTACGATCCTAAGCTGAGGCAATACAAGGAAGTCCTAAGCATTTCCCTGCTCAGACACAGCTaGCGCCACCACAGCCACCCG +
Preference number: 4 (lower is better)
Translates to: KYFYDPKLRQYKEVLSISLLRHS*RHHSHP
Trigger: CGGGTGGCTGTGGTGGCGGCAGCTGTGTCTGAGCAG...GGAAATGCTTAGGACTTCCTTGTATTGCCTCAGCTTAGGATCGTAGAAATACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp ACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCTATCCACTATTGGCATaGTGCATCACTGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: TVVSLAGLVGNVTKEVPIYPLLA*CITGMC
Trigger: GCACATCCCAGTGATGCACCATGCCAATAGTGGATA...GATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGAAGAAAAGGAACATACCCTGCCCGTGAAGGCATGTGCTTTCCCTTCCAGATATCATGCGCGTCCTCCTaGTTCCCAAAGCGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: RRKGTYPAREGMCFPFQISCASS*FPKRKC
Trigger: ACACTTCCGCTTTGGGAACCAGGAGGACGCGCATGA...TATCTGGAAGGGAAAGCACATGCCTTCACGGGCAGGGTATGTTCCTTTTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR CCA 90 bp AAGAGGTTCCGATCTAGAGAAGCCTCAAAGCCTCTGTGTTGGGCGGTCTGTGGAGAAGCGCTTGCTGGCTaGAACCTTCTTCTTGCATTT +
Preference number: 4 (lower is better)
Translates to: KRFRSREASKPLCWAVCGEALAG*NLLLAF
Trigger: AAATGCAAGAAGAAGGTTCCAGCCAGCAAGCGCTTC...TCCACAGACCGCCCAACACAGAGGCTTTGAGGCTTCTCTAGATCGGAACCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp ACAGCAGCCTGGAAAGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCACTTTTCTTAGAGCCTaGAATTCGCAGATAGAACAG +
Preference number: 4 (lower is better)
Translates to: TAAWKADVFAGIEGSSDPTFLRA*NSQIEQ
Trigger: CTGTTCTATCTGCGAATTCCAGGCTCTAAGAAAAGT...GGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCTTTCCAGGCTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGGGGGGAAAAGTGCTGTaGAGGAGCTGGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: KINGEFYPKASTSVKTCGGGKVL*RSWLLH
Trigger: GTGAAGAAGCCAGCTCCTCCACAGCACTTTTCCCCC...CCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTT
51% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGAGGAGGTGCAGAGGATaGGACACAGACCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: KINGEFYPKASTSVKTCGRRCRG*DTDLCT
Trigger: TGTGCAGAGGTCTGTGTCCCATCCTCTGCACCTCCT...CCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
3UTR CAA 72 bp CAGAGGGTGGATCGGTCGGCTGTTCAGTGGGATGTATaGACTGGATCAGTTGATTCTGGGCTTGATCTAGAG +
Preference number: 4 (lower is better)
Translates to: QRVDRSAVQWDV*TGSVDSGLDLE
Trigger: CTCTAGATCAAGCCCAGAATCAACTGATCCAGTCAATACATCCCACTGAACAGCCGACCGATCCACCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587379.1
CDS-3UTR TCA 90 bp ATGCGGCTGGCAAGAAGTCACCCTTCTGCAAGTGACTGGGACACATGCCAGATACCTCTGTTTTGGGGTTaGGCAACACATATTTGCTCT +
Preference number: 4 (lower is better)
Translates to: MRLARSHPSASDWDTCQIPLFWG*ATHICS
Trigger: AGAGCAAATATGTGTTGCTCAACCCCAAAACAGAGG...TATCTGGCATGTGTCCCAGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR TCA 90 bp AATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGTTATTGACTGGATGGTGGCATTaGGAAAGCAGGTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: NGEFYPKASTSVKTCGLLTGWWH*ESRCCQ
Trigger: TTGGCAACACCTGCTTTCTCAATGCCACCATCCAGT...CAATAACCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAAGGAATACCCTCCAAAAATTTaGTGGACCAAGGTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: PTPNSLCSPGQLRATHKEYPPKI*WTKVVA
Trigger: GGCTACTACCTTGGTCCATCAAATTTTTGGAGGGTA...TTCCTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp ACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGAGAGGGCATAGAGTCCATACATaGCAGGATCACCATTATTCT +
Preference number: 4 (lower is better)
Translates to: TEARPSSLNIQRLVRRRGHRVHT*QDHHYS
Trigger: AGAATAATGGTGATCCTGTCATGTATGGACTCTATG...CCCTCTCCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGAAGCCACGGAGAGCTCCTACCGTaGCAGGCTCCCAGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: QSHYLHIWERKHIANGSHGELLP*QAPSAA
Trigger: TGCTGCGCTGGGAGCCTGTCACGGTAGGAGCTCTCC...GTGGCTTCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp CAGGCACAGTCAGATCCTAAAGTTATAAACCTCCTCATGTTAAAGCTCCCTGTTGTGCAGACTTGGGCCTaGTGTCCTACTGCGGCATGG +
Preference number: 4 (lower is better)
Translates to: QAQSDPKVINLLMLKLPVVQTWA*CPTAAW
Trigger: CCATGCCGCAGTAGGACAGCAGGCCCAAGTCTGCAC...AACAGGGAGCTTTAACATGAGGAGGTTTATAACTTTAGGATCTGACTGTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp AAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGAACCTAGGAACCCAATaGATGGCATCTCGATGCGGC +
Preference number: 4 (lower is better)
Translates to: KINGEFYPKASTSVKTCGNLGTQ*MASRCG
Trigger: GCCGCATCGAGATGCCATGCATTGGGTTCCTAGGTT...CCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR GCA 90 bp TCTCGTGCTCACCACTGCCCAAGAGTTAACGAATGTATGTACCCCAGGAAAAGGCAGAAAGTCATCTCGTaGTCACCACTGCCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: SRAHHCPRVNECMYPRKRQKVIS*SPLPKS
Trigger: ACTCTTGGGCAGTGGTGAGCACGAGATGACTTTCTG...CCTTTTCCTGGGGTACATACATTCGTTAACTCTTGGGCAGTGGTGAGCACGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR GCA 90 bp AGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATAGCCTCTGCTAACAGTGATAAACGCTaGAGAAAGTCATCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: SRCIRRYRGLLRPQIASANSDKR*RKSSRA
Trigger: AGCACGAGATGACTTTCTGCAGCGTTTATCACTGTT...AGCAGAGGCTATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR GCA 90 bp CAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGACCGGAGTATTTTATTaGACCAAGATCTTGGCAACA +
Preference number: 4 (lower is better)
Translates to: QSTEARPSSLNIQRLVRRTGVFY*TKILAT
Trigger: TGTTGCCAAGATCTTGGTGCAATAAAATACTCCGGT...CCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR CCA 90 bp GCATTTCCTGCCTGTTTTCTTTGGTCTGAACCTATGAACTCAGGAATGACACAAAGGGCTGAGTTTGGTTaGGCAGGTGCTACGCGGAGC +
Preference number: 4 (lower is better)
Translates to: AFPACFLWSEPMNSGMTQRAEFG*AGATRS
Trigger: GCTCCGCGTAGCACCTGCCCAACCAAACTCAGCCCT...TTGTGTCATTCCTGAGTTCATAGGTTCAGACCAAAGAAAACAGGCAGGAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp GTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTACGTTGGATGTTCTGTaGATGGTGAAGCGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: VTKPEHGSQALIFEHSETTLDVL*MVKRLL
Trigger: CAGCAAGCGCTTCACCATCCACAGAACATCCAACGT...AGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAAGTTGACGTTGCTGGAATaGACCAAGGAATCATTCATC +
Preference number: 4 (lower is better)
Translates to: PPTPNSLCSPGQLRATHKLTLLE*TKESFI
Trigger: GATGAATGATTCCTTGGTCCATTCCAGCAACGTCAA...CTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACACTTTTCTTAGAGCCTaGAATTCGCAGATAGAACAG +
Preference number: 4 (lower is better)
Translates to: APPTPNSLCSPGQLRATHTFLRA*NSQIEQ
Trigger: CTGTTCTATCTGCGAATTCCAGGCTCTAAGAAAAGT...GTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAGATATACACACAACCCACATCCCACACACACCCCACACATGCCCTTCTCCAACCTTCTGCAAGTGACTaGGACACATGCCAGATATAC +
Preference number: 4 (lower is better)
Translates to: QIYTQPTSHTHPTHALLQPSASD*DTCQIY
Trigger: GTATATCTGGCATGTGTCCCAGTCACTTGCAGAAGG...TTGGAGAAGGGCATGTGTGGGGTGTGTGTGGGATGTGGGTTGTGTGTATATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR TCA 90 bp CAGATATACACACAACCCACATCCCACACACACCCCACACATGCCCTTCTCCAATATACGGACGTATGTTaGGGAATTCCGGATAGCCTA +
Preference number: 4 (lower is better)
Translates to: QIYTQPTSHTHPTHALLQYTDVC*GIPDSL
Trigger: TAGGCTATCCGGAATTCCTCAACATACGTCCGTATA...TTGGAGAAGGGCATGTGTGGGGTGTGTGTGGGATGTGGGTTGTGTGTATATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR TCA 90 bp ACAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGAAGTTCCGTCGAGTCTaGAGTTTCTGGAAGGCGTTG +
Preference number: 4 (lower is better)
Translates to: TGVYSVAEQISVRGTVRVKFRRV*SFWKAL
Trigger: CAACGCCTTCCAGAAACTTCAGACTCGACGGAACTT...CACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAATATACACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587010.5
ENST00000588130.5
ENST00000589225.5
CDS-3UTR TCA 90 bp CCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTAAGTTCCGTCGAGTCTaGAGTTTCTGGAAGGCGTTG +
Preference number: 4 (lower is better)
Translates to: PDKLQSQSTEARPSSLNIKFRRV*SFWKAL
Trigger: CAACGCCTTCCAGAAACTTCAGACTCGACGGAACTT...AATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp TTAAGTAGTAAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGGTCAGCGGCGATAGCTaGGGCTGGCAGCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LSSKINGEFYPKASTSVKVSGDS*GWQPLL
Trigger: CAGCAAAGGCTGCCAGCCTCAGCTATCGCCGCTGAC...CTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTTACTACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp CAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGAAGCACTCACAAAATTaGGCAAACAAAGCCACTATT +
Preference number: 4 (lower is better)
Translates to: QSTEARPSSLNIQRLVRRKHSQN*ANKATI
Trigger: AATAGTGGCTTTGTTTGCTCAATTTTGTGAGTGCTT...CCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp GCTTCCACTCTCGTGAATCAGCACCGCTTGATCATCTCCTTCCACAGGGGCACATTTCCAAGCTATAAGTaGAAAAAGCAGTCAGAACGG +
Preference number: 4 (lower is better)
Translates to: ASTLVNQHRLIISFHRGTFPSYK*KKQSER
Trigger: CCGTTCTGACTGCTTTTTTCACTTATAGCTTGGAAA...TGTGCCCCTGTGGAAGGAGATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588130.5
CDS-3UTR GCA 90 bp CAGGCACAGTCAGATCCTAAAGTTATAAACCTCCTCATGTTAAAGCTCCCTGTTTACCGCAGGAACTCATaGGCGTCCTCCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: QAQSDPKVINLLMLKLPVYRRNS*ASSWFP
Trigger: TGGGAACCAGGAGGACGCGCATGAGTTCCTGCGGTA...AACAGGGAGCTTTAACATGAGGAGGTTTATAACTTTAGGATCTGACTGTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp CAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACATCCACTCAGGACATCTaGTTTCACAAAAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: QSLNKSPLGALFVCWEHTSTQDI*FHKKFQ
Trigger: CTGGAACTTTTTGTGAAAGCAGATGTCCTGAGTGGA...TGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp TTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATAGAACCTTGGTGGAGTCGCTaGTGGCCGAGTGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: FPVFIKLQVGRHSLSNIEPWWSR*WPSALG
Trigger: GCCCAGAGCACTCGGCCAGCAGCGACTCCACCAAGG...TTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CAGCAGACAACTAACATTTTCAACTACAGAACATCACACGGTAAACATGGCAGAAGCTCCACTCACTGCTaGTGGGACACAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: QQTTNIFNYRTSHGKHGRSSTHC*WDTGGH
Trigger: GTGGCCACCTGTGTCCCAGCAGCAGTGAGTGGAGCT...TCTGCCATGTTTACCGTGTGATGTTCTGTAGTTGAAAATGTTAGTTGTCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR CCA 90 bp GTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTTATCCACTATTGGCATaGTGCATCACTGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: VTKPEHGSQALIFEHSETYPLLA*CITGMC
Trigger: GCACATCCCAGTGATGCACCATGCCAATAGTGGATA...AGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp ACTCGTTTACAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTCTGCATGGCGTCGATaGTGTACCGCAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: TRLQVYIQSLNKSPLGALSAWRR*CTAGTH
Trigger: ATGAGTTCCTGCGGTACACCATCGACGCCATGCAGA...CAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAATATACACCTGTAAACGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp AATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGTTATTGGAAGCGCTTGCTGGCTaGAACCTTCTTCTTGCATTT +
Preference number: 4 (lower is better)
Translates to: NGEFYPKASTSVKTCGLLEALAG*NLLLAF
Trigger: AAATGCAAGAAGAAGGTTCCAGCCAGCAAGCGCTTC...CAATAACCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAAGAAGGAATCATTCATCTaGTACCACTGTCCATTGCTT +
Preference number: 4 (lower is better)
Translates to: PPTPNSLCSPGQLRATHKKESFI*YHCPLL
Trigger: AAGCAATGGACAGTGGTACCAGATGAATGATTCCTT...CTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GTTCGTGTGCTGGGAACACACAGGTCAATGAAGAGCAGCCAGAAAGCCCCAAGCAAGGAATCATTCATCTaGTACCACTGTCCATTGCTT +
Preference number: 4 (lower is better)
Translates to: VRVLGTHRSMKSSQKAPSKESFI*YHCPLL
Trigger: AAGCAATGGACAGTGGTACCAGATGAATGATTCCTT...GCTTGGGGCTTTCTGGCTGCTCTTCATTGACCTGTGTGTTCCCAGCACACGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp ACTCGTTTACAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGGGGTGGAGCCATTCCTaGATATGGGCACACCAATCT +
Preference number: 4 (lower is better)
Translates to: TRLQVYIQSLNKSPLGALGWSHS*IWAHQS
Trigger: AGATTGGTGTGCCCATATCCAGGAATGGCTCCACCC...CAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAATATACACCTGTAAACGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp ACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCCTTTTTCTTTTTCCTTaGAGACTCTTCCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: THCRFSCRAGRECHQRGSLFLFP*RLFHGL
Trigger: GAGGCCATGGAAGAGTCTCCAAGGAAAAAGAAAAAG...GGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTTATTTGAGCAGTTCCTaGACCACATCAGACTCCCGC +
Preference number: 4 (lower is better)
Translates to: PDKLQSQSTEARPSSLNIYLSSS*TTSDSR
Trigger: GCGGGAGTCTGATGTGGTCCAGGAACTGCTCAAATA...AATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GAAGATTATTTGAGGCCAGGATCCTATACTGAGGGGGCACCTCTTTCAGTGTCTCGGTCGGCTGTTCAGTaGGATGTATTGACTGGATCA +
Preference number: 4 (lower is better)
Translates to: EDYLRPGSYTEGAPLSVSRSAVQ*DVLTGS
Trigger: TGATCCAGTCAATACATCCCACTGAACAGCCGACCG...AGACACTGAAAGAGGTGCCCCCTCAGTATAGGATCCTGGCCTCAAATAATCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587379.1
CDS-3UTR TCA 90 bp TCGTTTACAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTTGTAGTAGCCTGCGTTTaGCGATCCAACTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: SFTGVYSVAEQISVRGTVVVACV*RSNLAQ
Trigger: CTGTGCCAAGTTGGATCGTCAAACGCAGGCTACTAC...AACAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAATATACACCTGTAAACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR TCA 90 bp TCGTTTACAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTTGGAGCACTTCACGCGTaGTCTGAGATACCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SFTGVYSVAEQISVRGTVGALHA*SEIPSK
Trigger: TTTGGAGGGTATCTCAGATCACGCGTGAAGTGCTCC...AACAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAATATACACCTGTAAACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR TCA 90 bp ACTCGTTTACAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGCACTCCTTGGGCATTTaGGATGCCCATCCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: TRLQVYIQSLNKSPLGALHSLGI*DAHPLL
Trigger: TAGAAGAGGATGGGCATCTCAAATGCCCAAGGAGTG...CAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAATATACACCTGTAAACGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR TCA 90 bp CTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTATCAGATGAGTATTTaGGCAGTTCCTGGACCACAT +
Preference number: 4 (lower is better)
Translates to: LSLPDKLQSQSTEARPSSYQMSI*AVPGPH
Trigger: ATGTGGTCCAGGAACTGCTCAAATACTCATCTGATA...AGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp TCAATGAAGAGCAGCCAGAAAGCCCCAAGCTCTGGAGGCTTCCACTCTCGTGAAGTAAGCTTTATCAGATaGGTATTTGAGCAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SMKSSQKAPSSGGFHSREVSFIR*VFEQFL
Trigger: CAGGAACTGCTCAAATACTCATCTGATAAAGCTTAC...TTCACGAGAGTGGAAGCCTCCAGAGCTTGGGGCTTTCTGGCTGCTCTTCATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588130.5
ENST00000589225.5
CDS-3UTR TCA 90 bp AGCAAACAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGAGGAGAGCTCCTACCGTaGCAGGCTCCCAGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: SKQSHYLHIWERKHIANGGELLP*QAPSAA
Trigger: TGCTGCGCTGGGAGCCTGTCACGGTAGGAGCTCTCC...TCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTGTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp CACAGGAGCTTGATTCTCTCCCACCCTTCTAAGAAGAGAAACGTAAAAACAGAACCAGCAGAGCCACACTaGAGGAGGTCTAAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: HRSLILSHPSKKRNVKTEPAEPH*RRSKSN
Trigger: GTTGGACTTAGACCTCCTTCAGTGTGGCTCTGCTGG...TTCTGTTTTTACGTTTCTCTTCTTAGAAGGGTGGGAGAGAATCAAGCTCCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp ACTCGTTTACAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGGGTACCACTGTCCATTaGTTGCCTTCACGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: TRLQVYIQSLNKSPLGALGTTVH*LPSRSS
Trigger: ACTGCTACGTGAAGGCAAGCAATGGACAGTGGTACC...CAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAATATACACCTGTAAACGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR GCA 90 bp AGCAAACAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGAGTGGACGGAGGTCATTaGCGGTCGCCCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: SKQSHYLHIWERKHIANGVDGGH*RSPSTG
Trigger: CCCTGTGGAGGGCGACCGGCAATGACCTCCGTCCAC...TCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTGTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGAAGCCACCGAAGTGGGTCCTGGTaGAGGCCGCCTTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: QSHYLHIWERKHIANGSHRSGSW*RPPSSP
Trigger: TGGTGAAGAAGGCGGCCTGCACCAGGACCCACTTCG...GTGGCTTCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp ACAAGTTGGCAGGCACAGCTTGAGCAACATAGAAAAGTAATCTTCTTGAGTTATATGGGAGAGCAGCTGTaGCGAAGTGGGTCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TSWQAQLEQHRKVIFLSYMGEQL*RSGSWC
Trigger: GCACCAGGACCCACTTCGGCACAGCTGCTCTCCCAT...ATAACTCAAGAAGATTACTTTTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp TGTCAAATCCCTGCCCGTGAAGGCATGTGCTTTCCCTTCCAGATAAGTTACAAAGCCCGTGAAGGCATGTaGTTTCCCTTCCAGATAAGT +
Preference number: 4 (lower is better)
Translates to: CQIPAREGMCFPFQISYKAREGM*FPFQIS
Trigger: ACTTATCTGGAAGGGAAAGCACATGCCTTCACGGGC...TTTGTAACTTATCTGGAAGGGAAAGCACATGCCTTCACGGGCAGGGATTTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587379.1
CDS-3UTR GCA 90 bp TTCACGGTCACCTTCACACTTCCCACTACTATGAGGGCATTTGTCTTTTTCCTGGCCCGTGAAGGCATGTaGTTTCCCTTCCAGATAAGT +
Preference number: 4 (lower is better)
Translates to: FTVTFTLPTTMRAFVFFLAREGM*FPFQIS
Trigger: ACTTATCTGGAAGGGAAAGCACATGCCTTCACGGGC...CAGGAAAAAGACAAATGCCCTCATAGTAGTGGGAAGTGTGAAGGTGACCGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp ACAAGTTGGCAGGCACAGCTTGAGCAACATAGAAAAGTAATCTTCTTGAGTTATCCTGGGAGAGGTAGCTaGTGTACACAGGCCCCACTC +
Preference number: 4 (lower is better)
Translates to: TSWQAQLEQHRKVIFLSYPGRGS*CTQAPL
Trigger: GAGTGGGGCCTGTGTACAGCAGCTACCTCTCCCAGG...ATAACTCAAGAAGATTACTTTTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR CCA 90 bp ACATGCTACTCGTTTACAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGAGCGCTCCTGGACTGTaGCCTGTTCAAACACCGAAG +
Preference number: 4 (lower is better)
Translates to: TCYSFTGVYSVAEQISVRSAPGL*PVQTPK
Trigger: CTTCGGTGTTTGAACAGGCCACAGTCCAGGAGCGCT...CCTAACGGAGATTTGTTCAGCGACTGAATATACACCTGTAAACGAGTAGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp GCCAGTAGTTTTGCCATTTCAATCACTTATTGCCACAACTCAACTTCTCTAAAGCACTTTCTGCGGGGCTaGGACTCCGTCACCACAGCT +
Preference number: 4 (lower is better)
Translates to: ASSFAISITYCHNSTSLKHFLRG*DSVTTA
Trigger: AGCTGTGGTGACGGAGTCCCAGCCCCGCAGAAAGTG...CTTTAGAGAAGTTGAGTTGTGGCAATAAGTGATTGAAATGGCAAAACTACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp AAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGAGCCATTCCTGGATATaGGCACACCAATCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: KINGEFYPKASTSVKTCGSHSWI*AHQSLQ
Trigger: CTGAAGAGATTGGTGTGCCCATATCCAGGAATGGCT...CCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CACAGGAGCTTGATTCTCTCCCACCCTTCTAAGAAGAGAAACGTAAAAACAGAAATGTGTGTGGGTGTCTaGGAGAGTTTGGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: HRSLILSHPSKKRNVKTEMCVGV*ESLGEG
Trigger: CCCTTCCCCCAAACTCTCCCAGACACCCACACACAT...TTCTGTTTTTACGTTTCTCTTCTTAGAAGGGTGGGAGAGAATCAAGCTCCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGAAGCCACCCCTCCACAGGGTGCTaGCCTTCTTGGCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: QSHYLHIWERKHIANGSHPSTGC*PSWQKG
Trigger: CCCTTTCTGCCAAGAAGGCCAGCACCCTGTGGAGGG...GTGGCTTCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATAGAAGCTCGGACACAACGGTaGCGTCAGCCCCGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: FPVFIKLQVGRHSLSNIEARTQR*RQPREA
Trigger: TGCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGC...TTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp CCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAAGTGGAAGCCACAGGACTaGTCAAAAATAAATGTTTTG +
Preference number: 4 (lower is better)
Translates to: PPTPNSLCSPGQLRATHKWKPQD*SKINVL
Trigger: CAAAACATTTATTTTTGACCAGTCCTGTGGCTTCCA...CTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp AGGGCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTGCTATGACAAAGGCTTaGGTTATTGACATTTACTTA +
Preference number: 4 (lower is better)
Translates to: RAPPTPNSLCSPGQLRATAMTKA*VIDIYL
Trigger: TAAGTAAATGTCAATAACCCAAGCCTTTGTCATAGC...AGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR TCA 90 bp AATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGTTATTGACTTCACGCGTGATCTaGGATACCCTCCAAAAATTT +
Preference number: 4 (lower is better)
Translates to: NGEFYPKASTSVKTCGLLTSRVI*DTLQKF
Trigger: AAATTTTTGGAGGGTATCTCAGATCACGCGTGAAGT...CAATAACCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp AGTAGTAAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCGGTTCAGAACCACCTTaGCGTTGCTGGAATGGACCA +
Preference number: 4 (lower is better)
Translates to: SSKINGEFYPKASTSVKTGSEPP*RCWNGP
Trigger: TGGTCCATTCCAGCAACGTCAAGGTGGTTCTGAACC...GGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTTACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp AGTAGTAAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCAGCCAGGAGCTTAGGTaGGGTAGAGAGGACAACATC +
Preference number: 4 (lower is better)
Translates to: SSKINGEFYPKASTSVKTSQELR*GREDNI
Trigger: GATGTTGTCCTCTCTACCTCACCTAAGCTCCTGGCT...GGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTTACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp AGCAAACAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGAAGGTCCTCGTTGACCTaGGGCAGCGCCGTCGAGATG +
Preference number: 4 (lower is better)
Translates to: SKQSHYLHIWERKHIANGRSSLT*GSAVEM
Trigger: CATCTCGACGGCGCTGCCTCAGGTCAACGAGGACCT...TCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTGTTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CAGATATACACACAACCCACATCCCACACACACCCCACACATGCCCTTCTCCAAGTAAGCTTTATCAGATaGGTATTTGAGCAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: QIYTQPTSHTHPTHALLQVSFIR*VFEQFL
Trigger: CAGGAACTGCTCAAATACTCATCTGATAAAGCTTAC...TTGGAGAAGGGCATGTGTGGGGTGTGTGTGGGATGTGGGTTGTGTGTATATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR TCA 90 bp CACAGGAGCTTGATTCTCTCCCACCCTTCTAAGAAGAGAAACGTAAAAACAGAAATGCCCTTCTCCAAGTaGCCAGAACACATGCCACAG +
Preference number: 4 (lower is better)
Translates to: HRSLILSHPSKKRNVKTEMPFSK*PEHMPQ
Trigger: CTGTGGCATGTGTTCTGGTCACTTGGAGAAGGGCAT...TTCTGTTTTTACGTTTCTCTTCTTAGAAGGGTGGGAGAGAATCAAGCTCCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR TCA 90 bp TTAAGTAGTAAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGTGCCACCCTCGGGTATaGGTCCAACCTAGGAACCCA +
Preference number: 4 (lower is better)
Translates to: LSSKINGEFYPKASTSVKCHPRV*VQPRNP
Trigger: TGGGTTCCTAGGTTGGACTCATACCCGAGGGTGGCA...CTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTTACTACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR TCA 90 bp ACAAGTTGGCAGGCACAGCTTGAGCAACATAGAAAAGTAATCTTCTTGAGTTATGGTAAGGCCAACAGATaGAGGGGTCCCGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: TSWQAQLEQHRKVIFLSYGKANR*RGPAEE
Trigger: TTCCTCAGCGGGACCCCTTCATCTGTTGGCCTTACC...ATAACTCAAGAAGATTACTTTTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp AGTAGTAAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCGCAGCTTTGGAGGAATaGAGCCGTTCTGGGACTTCA +
Preference number: 4 (lower is better)
Translates to: SSKINGEFYPKASTSVKTAALEE*SRSGTS
Trigger: TGAAGTCCCAGAACGGCTGCATTCCTCCAAAGCTGC...GGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTTACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGAAGCCACTGCTGCTATTCGAGTTaGTGGTCCCAGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: QSHYLHIWERKHIANGSHCCYSS*WSQAAP
Trigger: AGGGGCTGCCTGGGACCAGCAACTCGAATAGCAGCA...GTGGCTTCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp ACAAGTTGGCAGGCACAGCTTGAGCAACATAGAAAAGTAATCTTCTTGAGTTATCTCACAAGGAAGGGGTaGACAGTAGGGCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: TSWQAQLEQHRKVIFLSYLTRKG*TVGPPS
Trigger: AGAGGGTGGCCCTACTGTGCACCCCTTCCTTGTGAG...ATAACTCAAGAAGATTACTTTTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR GCA 90 bp AAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGAGTCAACCAAGTGACTaGTATGACAAAGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: KINGEFYPKASTSVKTCGSQPSD*YDKGLG
Trigger: ACCCAAGCCTTTGTCATAGCAGTCACTTGGTTGACT...CCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR GCA 90 bp AAGTATTTCTACGATCCTAAGCTGAGGCAATACAAGGAAGTCCTAAGCATTTCCTGCCGGGCTGGCTGTTaGCATAGGAATGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: KYFYDPKLRQYKEVLSISCRAGC*HRNVLL
Trigger: CAGCAGAACATTCCTATGGCAACAGCCAGCCCGGCA...GGAAATGCTTAGGACTTCCTTGTATTGCCTCAGCTTAGGATCGTAGAAATACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp TTAAGTAGTAAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGGGCATGGTGCATCACTaGGATGTGCAGACTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSSKINGEFYPKASTSVKGMVHH*DVQTWA
Trigger: GGCCCAAGTCTGCACATCCCAGTGATGCACCATGCC...CTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTTACTACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GCCAGTAGTTTTGCCATTTCAATCACTTATTGCCACAACTCAACTTCTCTAAAGGGCATGGTGCATCACTaGGATGTGCAGACTTGGGCC +
Preference number: 4 (lower is better)
Translates to: ASSFAISITYCHNSTSLKGMVHH*DVQTWA
Trigger: GGCCCAAGTCTGCACATCCCAGTGATGCACCATGCC...CTTTAGAGAAGTTGAGTTGTGGCAATAAGTGATTGAAATGGCAAAACTACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp GGATTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATACTGTCTCCTGGCCGGTaGGTCATCTCCACTCTTGTG +
Preference number: 4 (lower is better)
Translates to: GFPVFIKLQVGRHSLSNILSPGR*VISTLV
Trigger: CACAAGAGTGGAGATGACCCACCGGCCAGGAGACAG...TATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GCATTTCCTGCCTGTTTTCTTTGGTCTGAACCTATGAACTCAGGAATGACACAACTGTTGGCGAAGGCCTaGACAATGTGGTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: AFPACFLWSEPMNSGMTQLLAKA*TMWFCM
Trigger: CATGCAGAACCACATTGTCCAGGCCTTCGCCAACAG...TTGTGTCATTCCTGAGTTCATAGGTTCAGACCAAAGAAAACAGGCAGGAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp AAGTATTTCTACGATCCTAAGCTGAGGCAATACAAGGAAGTCCTAAGCATTTCCTCATGCGCGTCCTCCTaGTTCCCAAAGCGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: KYFYDPKLRQYKEVLSISSCASS*FPKRKC
Trigger: ACACTTCCGCTTTGGGAACCAGGAGGACGCGCATGA...GGAAATGCTTAGGACTTCCTTGTATTGCCTCAGCTTAGGATCGTAGAAATACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp TTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATAGAAACAGCCCTGGCTCTATaGACGGGCCAAGTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FPVFIKLQVGRHSLSNIETALAL*TGQVEA
Trigger: TGCCTCCACTTGGCCCGTCCATAGAGCCAGGGCTGT...TTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATAGAACCGAGAAGCAAGGGATaGCTTGCCCAGAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: FPVFIKLQVGRHSLSNIEPRSKG*LAQSHQ
Trigger: CTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGG...TTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp TTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATAGAATCCACTCACTGCTGCTaGGACACAGGTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: FPVFIKLQVGRHSLSNIESTHCC*DTGGHR
Trigger: CCTGTGGCCACCTGTGTCCCAGCAGCAGTGAGTGGA...TTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp GGATTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATAATCTTAACGGAGGGCTaGGTTTGGTTGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GFPVFIKLQVGRHSLSNIILTEG*VWLGRC
Trigger: GCACCTGCCCAACCAAACTCAGCCCTCCGTTAAGAT...TATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp ACAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGTATCAGATGAGTATTTaGGCAGTTCCTGGACCACAT +
Preference number: 4 (lower is better)
Translates to: TGVYSVAEQISVRGTVRVYQMSI*AVPGPH
Trigger: ATGTGGTCCAGGAACTGCTCAAATACTCATCTGATA...CACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAATATACACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588130.5
ENST00000589225.5
CDS-3UTR TCA 90 bp TTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTAAGCTTTATCAGATaGGTATTTGAGCAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LQSQSTEARPSSLNIQRLVSFIR*VFEQFL
Trigger: CAGGAACTGCTCAAATACTCATCTGATAAAGCTTAC...CAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCGTAAGCTTTATCAGATaGGTATTTGAGCAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: QVYIQSLNKSPLGALFVCVSFIR*VFEQFL
Trigger: CAGGAACTGCTCAAATACTCATCTGATAAAGCTTAC...GCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAATATACACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588130.5
ENST00000589225.5
CDS-3UTR TCA 90 bp GGATTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATAAAGCCTCCACCTCAGTaGAGACCTGCGGGTTATTGC +
Preference number: 4 (lower is better)
Translates to: GFPVFIKLQVGRHSLSNIKPPPQ*RPAGYC
Trigger: GCAATAACCCGCAGGTCTTCACTGAGGTGGAGGCTT...TATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp ATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACAAGCACTCACAAAATTaGGCAAACAAAGCCACTATT +
Preference number: 4 (lower is better)
Translates to: IQSLNKSPLGALFVCWEHKHSQN*ANKATI
Trigger: AATAGTGGCTTTGTTTGCTCAATTTTGTGAGTGCTT...GTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR TCA 90 bp ACAAGTTGGCAGGCACAGCTTGAGCAACATAGAAAAGTAATCTTCTTGAGTTATGTGGCCACAGGAGCTTaGTTCTCTCCCACCCTTCTA +
Preference number: 4 (lower is better)
Translates to: TSWQAQLEQHRKVIFLSYVATGA*FSPTLL
Trigger: TAGAAGGGTGGGAGAGAATCAAGCTCCTGTGGCCAC...ATAACTCAAGAAGATTACTTTTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp AAGTATTTCTACGATCCTAAGCTGAGGCAATACAAGGAAGTCCTAAGCATTTCCGGCTTACGTGGCGTGTaGATAAGAAACAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KYFYDPKLRQYKEVLSISGLRGV*IRNSSQ
Trigger: CTGGCTGCTGTTTCTTATTCACACGCCACGTAAGCC...GGAAATGCTTAGGACTTCCTTGTATTGCCTCAGCTTAGGATCGTAGAAATACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp GCCAGTAGTTTTGCCATTTCAATCACTTATTGCCACAACTCAACTTCTCTAAAGGTTTGGTTGGGCAGGTaGTACGCGGAGCTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: ASSFAISITYCHNSTSLKVWLGR*YAELLN
Trigger: ATTCAGGAGCTCCGCGTAGCACCTGCCCAACCAAAC...CTTTAGAGAAGTTGAGTTGTGGCAATAAGTGATTGAAATGGCAAAACTACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp TTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATAGAAGGGAAAAGCACTTTCTaGGGGGCTGGGACTCCGTCA +
Preference number: 4 (lower is better)
Translates to: FPVFIKLQVGRHSLSNIEGKSTF*GAGTPS
Trigger: TGACGGAGTCCCAGCCCCGCAGAAAGTGCTTTTCCC...TTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp TTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATAGAAGTGGAGGAGACATGGTaGTTGCAGGCTCAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FPVFIKLQVGRHSLSNIEVEETW*LQAQWW
Trigger: CCACCACTGAGCCTGCAAGCACCATGTCTCCTCCAC...TTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp CAGCAGACAACTAACATTTTCAACTACAGAACATCACACGGTAAACATGGCAGACACTGTCGTTTCTCTTaGAGGGCTGGTCGGGAATGT +
Preference number: 4 (lower is better)
Translates to: QQTTNIFNYRTSHGKHGRHCRFS*RAGREC
Trigger: ACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTG...TCTGCCATGTTTACCGTGTGATGTTCTGTAGTTGAAAATGTTAGTTGTCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR CCA 90 bp GCATTTCCTGCCTGTTTTCTTTGGTCTGAACCTATGAACTCAGGAATGACACAAGAATGTAAGCGCTCCTaGACTGTGGCCTGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: AFPACFLWSEPMNSGMTQECKRS*TVACSN
Trigger: GTTTGAACAGGCCACAGTCCAGGAGCGCTTACATTC...TTGTGTCATTCCTGAGTTCATAGGTTCAGACCAAAGAAAACAGGCAGGAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp CAGGCACAGTCAGATCCTAAAGTTATAAACCTCCTCATGTTAAAGCTCCCTGTTTGTCCTACTGCGGCATaGAACCAGGATCTTAACGGA +
Preference number: 4 (lower is better)
Translates to: QAQSDPKVINLLMLKLPVCPTAA*NQDLNG
Trigger: TCCGTTAAGATCCTGGTTCCATGCCGCAGTAGGACA...AACAGGGAGCTTTAACATGAGGAGGTTTATAACTTTAGGATCTGACTGTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp GCATTTCCTGCCTGTTTTCTTTGGTCTGAACCTATGAACTCAGGAATGACACAAGAAGCTCTTGCTGGCTaGCTCGAACTCGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: AFPACFLWSEPMNSGMTQEALAG*LELDFL
Trigger: CAGAAAATCGAGTTCGAGCCAGCCAGCAAGAGCTTC...TTGTGTCATTCCTGAGTTCATAGGTTCAGACCAAAGAAAACAGGCAGGAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp GCATTTCCTGCCTGTTTTCTTTGGTCTGAACCTATGAACTCAGGAATGACACAATCATCTCCACTCTTGTaGCGACTAGCTCCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: AFPACFLWSEPMNSGMTQSSPLL*RLAPSV
Trigger: AACAGAGGGAGCTAGTCGCCACAAGAGTGGAGATGA...TTGTGTCATTCCTGAGTTCATAGGTTCAGACCAAAGAAAACAGGCAGGAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp AAGTATTTCTACGATCCTAAGCTGAGGCAATACAAGGAAGTCCTAAGCATTTCCTGCGAGCATGCTCCTTaGAGAGCAGGTAGTTGGCTA +
Preference number: 4 (lower is better)
Translates to: KYFYDPKLRQYKEVLSISCEHAP*RAGSWL
Trigger: TAGCCAACTACCTGCTCTCCAAGGAGCATGCTCGCA...GGAAATGCTTAGGACTTCCTTGTATTGCCTCAGCTTAGGATCGTAGAAATACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp CAGGCACAGTCAGATCCTAAAGTTATAAACCTCCTCATGTTAAAGCTCCCTGTTAAGGCCTGGACAATGTaGTTCTGCATGACACACAGC +
Preference number: 4 (lower is better)
Translates to: QAQSDPKVINLLMLKLPVKAWTM*FCMTHS
Trigger: GCTGTGTGTCATGCAGAACCACATTGTCCAGGCCTT...AACAGGGAGCTTTAACATGAGGAGGTTTATAACTTTAGGATCTGACTGTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CCA 90 bp TATACATGCTACTCGTTTACAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTCTTCTTGGAGTGATCTaGAATCACACTCGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: YTCYSFTGVYSVAEQISVLLGVI*NHTRAA
Trigger: GGCCGCCCGAGTGTGATTCCAGATCACTCCAAGAAG...AACGGAGATTTGTTCAGCGACTGAATATACACCTGTAAACGAGTAGCATGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp GGATTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATACTGGCCATTCACCTGTaGCTGTGTGCCATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GFPVFIKLQVGRHSLSNILAIHL*LCAIFL
Trigger: CAGGAAGATGGCACACAGCCACAGGTGAATGGCCAG...TATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp ACAAGTTGGCAGGCACAGCTTGAGCAACATAGAAAAGTAATCTTCTTGAGTTATGATCACCATCACCCATaGGAGAGCAGCTGTGCCGAA +
Preference number: 4 (lower is better)
Translates to: TSWQAQLEQHRKVIFLSYDHHHP*ESSCAE
Trigger: TTCGGCACAGCTGCTCTCCCATGGGTGATGGTGATC...ATAACTCAAGAAGATTACTTTTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp CAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGAAGCCACGGTTCAGAACCACCTTaGCGTTGCTGGAATGGACCA +
Preference number: 4 (lower is better)
Translates to: QSHYLHIWERKHIANGSHGSEPP*RCWNGP
Trigger: TGGTCCATTCCAGCAACGTCAAGGTGGTTCTGAACC...GTGGCTTCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp TCTCGTGCTCACCACTGCCCAAGAGTTAACGAATGTATGTACCCCAGGAAAAGGAAGCACTCACAAAATTaGGCAAACAAAGCCACTATT +
Preference number: 4 (lower is better)
Translates to: SRAHHCPRVNECMYPRKRKHSQN*ANKATI
Trigger: AATAGTGGCTTTGTTTGCTCAATTTTGTGAGTGCTT...CCTTTTCCTGGGGTACATACATTCGTTAACTCTTGGGCAGTGGTGAGCACGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR GCA 90 bp CAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGAAGCCACGCAGCTTTGGAGGAATaGAGCCGTTCTGGGACTTCA +
Preference number: 4 (lower is better)
Translates to: QSHYLHIWERKHIANGSHAALEE*SRSGTS
Trigger: TGAAGTCCCAGAACGGCTGCATTCCTCCAAAGCTGC...GTGGCTTCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp TCAAAATCAATGTATACATGCTACTCGTTTACAGGTGTATATTCAGTCGCTGAAGAGGCTGGCAGCCTTTaGTGGGTGAGTCACAGACCA +
Preference number: 4 (lower is better)
Translates to: SKSMYTCYSFTGVYSVAEEAGSL*WVSHRP
Trigger: TGGTCTGTGACTCACCCAGCAAAGGCTGCCAGCCTC...TTCAGCGACTGAATATACACCTGTAAACGAGTAGCATGTATACATTGATTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587010.5
ENST00000588130.5
ENST00000589225.5
CDS-3UTR GCA 90 bp TTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATAGAATTGTCCATCTCCACCTaGGACGACTCCGGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: FPVFIKLQVGRHSLSNIELSIST*DDSGRK
Trigger: TTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAA...TTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CCA 90 bp CAGCAGACAACTAACATTTTCAACTACAGAACATCACACGGTAAACATGGCAGAAGGAGAAGCTCTTGCTaGCTGGCTCGAACTCGATTT +
Preference number: 4 (lower is better)
Translates to: QQTTNIFNYRTSHGKHGRRRSSC*LARTRF
Trigger: AAATCGAGTTCGAGCCAGCCAGCAAGAGCTTCTCCT...TCTGCCATGTTTACCGTGTGATGTTCTGTAGTTGAAAATGTTAGTTGTCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR CCA 90 bp AGCAAACAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGACTGTCTCCTGGCCGGTaGGTCATCTCCACTCTTGTG +
Preference number: 4 (lower is better)
Translates to: SKQSHYLHIWERKHIANGLSPGR*VISTLV
Trigger: CACAAGAGTGGAGATGACCCACCGGCCAGGAGACAG...TCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTGTTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GGATTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATATCTGCATGGCGTCGATaGTGTACCGCAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: GFPVFIKLQVGRHSLSNISAWRR*CTAGTH
Trigger: ATGAGTTCCTGCGGTACACCATCGACGCCATGCAGA...TATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp GGATTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATAGTGCTGTGGAGGAGCTaGCTTCTTCACCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: GFPVFIKLQVGRHSLSNIVLWRS*LLHLLS
Trigger: GGAAAGAAGGTGAAGAAGCCAGCTCCTCCACAGCAC...TATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp TTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATAGAATGGAGTGGCCAGCGGTaGAACAGTTCGTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: FPVFIKLQVGRHSLSNIEWSGQR*NSSFPE
Trigger: CTCAGGAAACGAACTGTTCCACCGCTGGCCACTCCA...TTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp AGTAGTAAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCCCTCTGTTTTGGGGTTaGGCAACACATATTTGCTCT +
Preference number: 4 (lower is better)
Translates to: SSKINGEFYPKASTSVKTPLFWG*ATHICS
Trigger: AGAGCAAATATGTGTTGCTCAACCCCAAAACAGAGG...GGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTTACTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp GCATTTCCTGCCTGTTTTCTTTGGTCTGAACCTATGAACTCAGGAATGACACAACCTCTGTTTTGGGGTTaGGCAACACATATTTGCTCT +
Preference number: 4 (lower is better)
Translates to: AFPACFLWSEPMNSGMTQPLFWG*ATHICS
Trigger: AGAGCAAATATGTGTTGCTCAACCCCAAAACAGAGG...TTGTGTCATTCCTGAGTTCATAGGTTCAGACCAAAGAAAACAGGCAGGAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR TCA 90 bp TTAAGTAGTAAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGCAATGTGGTTCTGCATaGCACACAGCATGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LSSKINGEFYPKASTSVKQCGSA*HTACRS
Trigger: GCTTCTGCATGCTGTGTGTCATGCAGAACCACATTG...CTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTTACTACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp AGCAAACAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGAGTGGCCACAGGAGCTTaGTTCTCTCCCACCCTTCTA +
Preference number: 4 (lower is better)
Translates to: SKQSHYLHIWERKHIANGVATGA*FSPTLL
Trigger: TAGAAGGGTGGGAGAGAATCAAGCTCCTGTGGCCAC...TCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTGTTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp AAGTATTTCTACGATCCTAAGCTGAGGCAATACAAGGAAGTCCTAAGCATTTCCGTCCATGGTAAGAACTaGATGCCCCTAAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: KYFYDPKLRQYKEVLSISVHGKN*MPLRRS
Trigger: AGACCTTCTTAGGGGCATTCAGTTCTTACCATGGAC...GGAAATGCTTAGGACTTCCTTGTATTGCCTCAGCTTAGGATCGTAGAAATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp GCCAGTAGTTTTGCCATTTCAATCACTTATTGCCACAACTCAACTTCTCTAAAGCCACTATTGGCATGGTaGATCACTGGGATGTGCAGA +
Preference number: 4 (lower is better)
Translates to: ASSFAISITYCHNSTSLKPLLAW*ITGMCR
Trigger: TCTGCACATCCCAGTGATGCACCATGCCAATAGTGG...CTTTAGAGAAGTTGAGTTGTGGCAATAAGTGATTGAAATGGCAAAACTACTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp AGCAAACAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGACAGCTCTCATACGTGTaGTCACTGCCCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SKQSHYLHIWERKHIANGQLSYV*SLPCLL
Trigger: CAGGAGACAGGGCAGTGAGCACACGTATGAGAGCTG...TCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTGTTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR GCA 90 bp TTAAGTAGTAAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGTTTGGCTCCCAGATCTaGTGCTATTCGAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSSKINGEFYPKASTSVKFGSQI*CYSSCW
Trigger: CCAGCAACTCGAATAGCAGCAGATCTGGGAGCCAAA...CTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTTACTACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp ACAAGTTGGCAGGCACAGCTTGAGCAACATAGAAAAGTAATCTTCTTGAGTTATTCATCTCCACTCTTGTaGCGACTAGCTCCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: TSWQAQLEQHRKVIFLSYSSPLL*RLAPSV
Trigger: AACAGAGGGAGCTAGTCGCCACAAGAGTGGAGATGA...ATAACTCAAGAAGATTACTTTTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp CAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGAAGCCACAAGGCCTGGACAATGTaGTTCTGCATGACACACAGC +
Preference number: 4 (lower is better)
Translates to: QSHYLHIWERKHIANGSHKAWTM*FCMTHS
Trigger: GCTGTGTGTCATGCAGAACCACATTGTCCAGGCCTT...GTGGCTTCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp GCCAGTAGTTTTGCCATTTCAATCACTTATTGCCACAACTCAACTTCTCTAAAGTCTACGATCCTAAGCTaGGGCAATACAAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ASSFAISITYCHNSTSLKSTILS*GNTRKS
Trigger: GGACTTCCTTGTATTGCCTCAGCTTAGGATCGTAGA...CTTTAGAGAAGTTGAGTTGTGGCAATAAGTGATTGAAATGGCAAAACTACTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR GCA 90 bp AGCAAACAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGATTCAGGCAGGCTTTCTaGATGGCGTCGATGGTGTAC +
Preference number: 4 (lower is better)
Translates to: SKQSHYLHIWERKHIANGFRQAF*MASMVY
Trigger: GTACACCATCGACGCCATGCAGAAAGCCTGCCTGAA...TCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTGTTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGCAAACAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGAGGGTGGAGCCATTCCTaGATATGGGCACACCAATCT +
Preference number: 4 (lower is better)
Translates to: SKQSHYLHIWERKHIANGGWSHS*IWAHQS
Trigger: AGATTGGTGTGCCCATATCCAGGAATGGCTCCACCC...TCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTGTTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp AGCAAACAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGAGAATGTAAGCGCTCCTaGACTGTGGCCTGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: SKQSHYLHIWERKHIANGECKRS*TVACSN
Trigger: GTTTGAACAGGCCACAGTCCAGGAGCGCTTACATTC...TCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTGTTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp ATGTATACATGCTACTCGTTTACAGGTGTATATTCAGTCGCTGAACAAATCTCCCAACTTATCCACTATTaGCATGGTGCATCACTGGGA +
Preference number: 4 (lower is better)
Translates to: MYTCYSFTGVYSVAEQISQLIHY*HGASLG
Trigger: TCCCAGTGATGCACCATGCCAATAGTGGATAAGTTG...GGAGATTTGTTCAGCGACTGAATATACACCTGTAAACGAGTAGCATGTATACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CCA 90 bp CAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGAAGCCACTGCCGATGTTCTTCTTaGAGTGATCTGGAATCACAC +
Preference number: 4 (lower is better)
Translates to: QSHYLHIWERKHIANGSHCRCSS*SDLESH
Trigger: GTGTGATTCCAGATCACTCCAAGAAGAACATCGGCA...GTGGCTTCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp GGATTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATATATCAGATGAGTATTTaGGCAGTTCCTGGACCACAT +
Preference number: 4 (lower is better)
Translates to: GFPVFIKLQVGRHSLSNIYQMSI*AVPGPH
Trigger: ATGTGGTCCAGGAACTGCTCAAATACTCATCTGATA...TATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR TCA 90 bp TTAAGTAGTAAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGCATAGAGTCCATACATaGCAGGATCACCATTATTCT +
Preference number: 4 (lower is better)
Translates to: LSSKINGEFYPKASTSVKHRVHT*QDHHYS
Trigger: AGAATAATGGTGATCCTGTCATGTATGGACTCTATG...CTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTTACTACTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CCA 90 bp ACAAGTTGGCAGGCACAGCTTGAGCAACATAGAAAAGTAATCTTCTTGAGTTATTGGAAGCCACAGGACTaGTCAAAAATAAATGTTTTG +
Preference number: 4 (lower is better)
Translates to: TSWQAQLEQHRKVIFLSYWKPQD*SKINVL
Trigger: CAAAACATTTATTTTTGACCAGTCCTGTGGCTTCCA...ATAACTCAAGAAGATTACTTTTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR TCA 90 bp TCAAAATCAATGTATACATGCTACTCGTTTACAGGTGTATATTCAGTCGCTGAACATAGAGTCCATACATaGCAGGATCACCATTATTCT +
Preference number: 4 (lower is better)
Translates to: SKSMYTCYSFTGVYSVAEHRVHT*QDHHYS
Trigger: AGAATAATGGTGATCCTGTCATGTATGGACTCTATG...TTCAGCGACTGAATATACACCTGTAAACGAGTAGCATGTATACATTGATTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS CCA 90 bp CGAGGACAGCCCGGCCCCGGACCCTCCTCGGGAATACCCGGGCTCTaGAGAAGCGAGCTCGCGAGCGGGCGGAGCATCCCGGGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: RGQPGPGPSSGIPGL*RSELASGRSIPGPP
Trigger: AGGAGGACCCGGGATGCTCCGCCCGCTCGCGAGCTCGCTTCTCCAGAGCCCGGGTATTCCCGAGGAGGGTCCGGGGCCGGGCTGTCCTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000587783.5
CDS TCA 90 bp AGTGCGCAGAGCCACAGGCGCTCCCGCCCCTGTGCCGCGGCAGGGTaGCGTCTCCGCAGCGCACTAGAGGTGCCGCTACTTCCGGGTCGG +
Preference number: 5 (lower is better)
Translates to: SAQSHRRSRPCAAAG*RLRSALEVPLLPGR
Trigger: CCGACCCGGAAGTAGCGGCACCTCTAGTGCGCTGCGGAGACGTCACCCTGCCGCGGCACAGGGGCGGGAGCGCCTGTGGCTCTGCGCACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588365.1
CDS CCA 90 bp CAGCGCACTAGAGGTGCCGCTACTTCCGGGTCGGCCGAGCACACCTaGCGGCGTGGCGGACGCCTGAAGTGTGACAGTGGCGCGCGCCCC +
Preference number: 5 (lower is better)
Translates to: QRTRGAATSGSAEHT*RRGGRLKCDSGARP
Trigger: GGGGCGCGCGCCACTGTCACACTTCAGGCGTCCGCCACGCCGCCAGGTGTGCTCGGCCGACCCGGAAGTAGCGGCACCTCTAGTGCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588365.1
CDS GCA 90 bp GGGCCTTGGTGGAGTCGCTGCTGGCCGAGTGCTCTGGGCTGGAGCTaGTGGAGCCCCTCCTGTCGAGGCCAGCGCTCTCGTCGTTCCCCT +
Preference number: 5 (lower is better)
Translates to: GPWWSRCWPSALGWS*WSPSCRGQRSRRSP
Trigger: AGGGGAACGACGAGAGCGCTGGCCTCGACAGGAGGGGCTCCAGCAGCTCCAGCCCAGAGCACTCGGCCAGCAGCGACTCCACCAAGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS-3UTR CAA 90 bp GGCGGGCTCGGACACAACGGTGGCGTCAGCCCCGAGAAGCAAGGGATGGCTTGCGGTGGACGGAGGTCATaGCCGGTCGCCCTCCACAGG +
Preference number: 5 (lower is better)
Translates to: GGLGHNGGVSPEKQGMACGGRRS*PVALHR
Trigger: CCTGTGGAGGGCGACCGGCAATGACCTCCGTCCACC...GCAAGCCATCCCTTGCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGCCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS GCA 90 bp TTCCTCTTCCTCTTCCCGTGGGGAGCCGCAGTGGCCTCCCTGATGTaGTGTGGGAGGCGCGTCTCTGAGCCCAGCCTCTGCGGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: FLFLFPWGAAVASLM*CGRRVSEPSLCGSP
Trigger: GGGAGAGCCGCAGAGGCTGGGCTCAGAGACGCGCCTCCCACAGCACATCAGGGAGGCCACTGCGGCTCCCCACGGGAAGAGGAAGAGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CCA 90 bp CCTTGGTGGAGTCGCTGCTGGCCGAGTGCTCTGGGCTGGAGCTGCTaGAGCCCCTCCTGTCGAGGCCAGCGCTCTCGTCGTTCCCCTTCA +
Preference number: 5 (lower is better)
Translates to: PWWSRCWPSALGWSC*SPSCRGQRSRRSPS
Trigger: TGAAGGGGAACGACGAGAGCGCTGGCCTCGACAGGAGGGGCTCCAGCAGCTCCAGCCCAGAGCACTCGGCCAGCAGCGACTCCACCAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS-3UTR CAA 90 bp CACCACAGCCACCCGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGCAGGTGTTGCCAAGGTaGTGGAGTCCTGCGCCCACG +
Preference number: 5 (lower is better)
Translates to: HHSHPILPSRPGPAGRLRQVLPR*WSPAPT
Trigger: CGTGGGCGCAGGACTCCACAACCTTGGCAACACCTG...CCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCGGGTGGCTGTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CAA 90 bp AGGAAGCAGGGGAGGGCGGGCTCGGACACAACGGTGGCGTCAGCCCCGAGAAGCCTGCTGCTATTCGAGTaGCTGGTCCCAGGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: RKQGRAGSDTTVASAPRSLLLFE*LVPGSP
Trigger: GGGGCTGCCTGGGACCAGCAACTCGAATAGCAGCAG...GCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGCCCGCCCTCCCCTGCTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CACCACAGCCACCCGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGATGGCGTTGCCGCTGTaGGCGAAGGCCTGGACAATG +
Preference number: 5 (lower is better)
Translates to: HHSHPILPSRPGPAGRLRMALPL*AKAWTM
Trigger: CATTGTCCAGGCCTTCGCCAACAGCGGCAACGCCAT...CCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCGGGTGGCTGTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CAA 90 bp CGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCACGGGCTTGATGGCGTaGCCGCTGTTGGCGAAGGCC +
Preference number: 5 (lower is better)
Translates to: RSYQAAPDQQDVSGDSPFTGLMA*PLLAKA
Trigger: GGCCTTCGCCAACAGCGGCAACGCCATCAAGCCCGT...GAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CAA 90 bp AGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGGGTGGACGGAGGTCATaGCCGGTCGCCCTCCACAGG +
Preference number: 5 (lower is better)
Translates to: SPEKQGMACPEPPAMHREGGRRS*PVALHR
Trigger: CCTGTGGAGGGCGACCGGCAATGACCTCCGTCCACC...CTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CGTCAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGTGGACGGAGGTCATaGCCGGTCGCCCTCCACAGG +
Preference number: 5 (lower is better)
Translates to: RQPREARDGLPRATSYAPGGRRS*PVALHR
Trigger: CCTGTGGAGGGCGACCGGCAATGACCTCCGTCCACC...CGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS TCA 90 bp TCTTCTTCCTCTTCCTCTTCCCGTGGGGAGCCGCAGTGGCCTCCCTaGTGTGCTGTGGGAGGCGCGTCTCTGAGCCCAGCCTCTGCGGCT +
Preference number: 5 (lower is better)
Translates to: SSSSSSSRGEPQWPP*CAVGGASLSPASAA
Trigger: AGCCGCAGAGGCTGGGCTCAGAGACGCGCCTCCCACAGCACATCAGGGAGGCCACTGCGGCTCCCCACGGGAAGAGGAAGAGGAAGAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS TCA 90 bp GACGCCCTCGCCCTGATTCCGACTTCAACCTCTCCGAAGTTGACCTaGATCCTGCACAGACAGCGGGCCCCGGCGACCCCCATCACCGGC +
Preference number: 5 (lower is better)
Translates to: DALALIPTSTSPKLT*ILHRQRAPATPITG
Trigger: GCCGGTGATGGGGGTCGCCGGGGCCCGCTGTCTGTGCAGGATTCAGGTCAACTTCGGAGAGGTTGAAGTCGGAATCAGGGCGAGGGCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587783.5
CDS GCA 90 bp CTGTGGCTGTGTGCCATCTTCCTGCCGTCTGACAGCGGGCAGCTGTaGCTGGCCCTCCCTCCTGTACATGGGGCTCCCAGGCTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: LWLCAIFLPSDSGQL*LALPPVHGAPRLSL
Trigger: CAGAGACAGCCTGGGAGCCCCATGTACAGGAGGGAGGGCCAGGCACAGCTGCCCGCTGTCAGACGGCAGGAAGATGGCACACAGCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS-3UTR CAA 90 bp CCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCCAGGTGTTGCCAAGGTaGTGGAGTCCTGCGCCCACG +
Preference number: 5 (lower is better)
Translates to: PTQRAPSDPDRQLPGRDAQVLPR*WSPAPT
Trigger: CGTGGGCGCAGGACTCCACAACCTTGGCAACACCTG...GGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp AGCAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCCAGGTGTTGCCAAGGTaGTGGAGTCCTGCGCCCACG +
Preference number: 5 (lower is better)
Translates to: SRCCQGCGVLRPRGRPAPQVLPR*WSPAPT
Trigger: CGTGGGCGCAGGACTCCACAACCTTGGCAACACCTG...GGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR CAA 90 bp TCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGACGGGCTTGATGGCGTaGCCGCTGTTGGCGAAGGCC +
Preference number: 5 (lower is better)
Translates to: SLRSRPTAPGKGRLVSRRTGLMA*PLLAKA
Trigger: GGCCTTCGCCAACAGCGGCAACGCCATCAAGCCCGT...CCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp GCGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGCCAGGAGCCCTGCCTTaGGCTCCCAGATCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: AQQSPHRELPQIQTDSSRPGALP*APRSAA
Trigger: AGCAGCAGATCTGGGAGCCAAAGGCAGGGCTCCTGG...CCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp ACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCACTCCGGGAAGGGACGCCTaGTCTCCAGGAGGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: TSYAPGDHLGDMWPPSPTPGRDA*SPGGCR
Trigger: TCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGG...AGTGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp GCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGCCGGGAAGGGACGCCTaGTCTCCAGGAGGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: AEPTQRAPSDPDRQLPGRPGRDA*SPGGCR
Trigger: TCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGG...CCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000587379.1
ENST00000589225.5
ENST00000592231.5
CDS GCA 90 bp CCCCTCCTGTCGAGGCCAGCGCTCTCGTCGTTCCCCTTCAGCCCATaGCCGTTGGCAGTGGCTGTAGCCAGGAGCTTAGGTGAGGTAGAG +
Preference number: 5 (lower is better)
Translates to: PLLSRPALSSFPFSP*PLAVAVARSLGEVE
Trigger: CTCTACCTCACCTAAGCTCCTGGCTACAGCCACTGCCAACGGGCATGGGCTGAAGGGGAACGACGAGAGCGCTGGCCTCGACAGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS GCA 90 bp CCGAAGTGGGTCCTGGTGCAGGCCGCCTTCTTCACCAAGACCTTCTaGTCCTTTCCTCCTCCGCTTCCTGCTGCTCGCGTGGTGGCCGTC +
Preference number: 5 (lower is better)
Translates to: PKWVLVQAAFFTKTF*SFPPPLPAARVVAV
Trigger: GACGGCCACCACGCGAGCAGCAGGAAGCGGAGGAGGAAAGGAGCAGAAGGTCTTGGTGAAGAAGGCGGCCTGCACCAGGACCCACTTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CCA 90 bp GGCAGGTGCTACGCGGAGCTCCTGAATGTAAGCGCTCCTGGACTGTaGCCTGTTCAAACACCGAAGCCGCAGAGCGGGCGTCAGAGCCCC +
Preference number: 5 (lower is better)
Translates to: GRCYAELLNVSAPGL*PVQTPKPQSGRQSP
Trigger: GGGGCTCTGACGCCCGCTCTGCGGCTTCGGTGTTTGAACAGGCCACAGTCCAGGAGCGCTTACATTCAGGAGCTCCGCGTAGCACCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312010.10
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000591942.6
ENST00000592907.5
CDS CCA 90 bp GGCAGGTGCTACGCGGAGCTCCTGAATGTAAGCGCTCCTGGACTGTaGCCTGTTCAAACACCGAAGCCGCAGAGCGGGCGTCAGAGCCCG +
Preference number: 5 (lower is better)
Translates to: GRCYAELLNVSAPGL*PVQTPKPQSGRQSP
Trigger: CGGGCTCTGACGCCCGCTCTGCGGCTTCGGTGTTTGAACAGGCCACAGTCCAGGAGCGCTTACATTCAGGAGCTCCGCGTAGCACCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586531.5
ENST00000587783.5
CDS-3UTR CAA 90 bp GATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCAACGGAGGGCTGAGTTaGGTTGGGCAGGTGCTACGC +
Preference number: 5 (lower is better)
Translates to: DPTKPPRTSRTSPETALSNGGLS*VGQVLR
Trigger: GCGTAGCACCTGCCCAACCAAACTCAGCCCTCCGTT...GGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CAA 90 bp GCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGCAGGTGTTGCCAAGGTaGTGGAGTCCTGCGCCCACG +
Preference number: 5 (lower is better)
Translates to: AEPTQRAPSDPDRQLPGRQVLPR*WSPAPT
Trigger: CGTGGGCGCAGGACTCCACAACCTTGGCAACACCTG...CCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp GCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCGTGTCCGAGACGCTCTaGCACACGGAGCACTTCACG +
Preference number: 5 (lower is better)
Translates to: AHTESSLRSRPTAPGKGRVSETL*HTEHFT
Trigger: CGTGAAGTGCTCCGTGTGCAAGAGCGTCTCGGACAC...GCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp TTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCAGGAGCCCTGCCTTaGGCTCCCAGATCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LPRATSYAPGDHLGDMWPPGALP*APRSAA
Trigger: AGCAGCAGATCTGGGAGCCAAAGGCAGGGCTCCTGG...TGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGCCACTTGGCGGCGTTTaGGAGTGGCCAGCGGTGGAA +
Preference number: 5 (lower is better)
Translates to: LPQIQTDSSREGTPCLQEPLGGV*EWPAVE
Trigger: TTCCACCGCTGGCCACTCCAAAACGCCGCCAAGTGG...CTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp GGCGGGCTCGGACACAACGGTGGCGTCAGCCCCGAGAAGCAAGGGATGGCTTGCCTGACCGCCGACATCTaGCCATCCCAGGTCAGAACT +
Preference number: 5 (lower is better)
Translates to: GGLGHNGGVSPEKQGMACLTADI*PSQVRT
Trigger: AGTTCTGACCTGGGATGGCAAGATGTCGGCGGTCAG...GCAAGCCATCCCTTGCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp ACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCCCGGGAAGGGACGCCTaGTCTCCAGGAGGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: TESSLRSRPTAPGKGRLVPGRDA*SPGGCR
Trigger: TCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGG...GACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000587379.1
ENST00000589225.5
ENST00000592231.5
CDS TCA 90 bp CTTGGCGGCGTTTTGGAGTGGCCAGCGGTGGAACAGTTCGTTTCCTaGGAATCGCAGAGATGGGCCGCTCCACTCCTGGGGGTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: LGGVLEWPAVEQFVS*ESQRWAAPLLGVWG
Trigger: CCCCCAGACCCCCAGGAGTGGAGCGGCCCATCTCTGCGATTCTCAGGAAACGAACTGTTCCACCGCTGGCCACTCCAAAACGCCGCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS GCA 90 bp CGCTTCCTGCTGCTCGCGTGGTGGCCGTCCGTAACACATCCCACCTaGTGGCCATTCACCTGTGGCTGTGTGCCATCTTCCTGCCGTCTG +
Preference number: 5 (lower is better)
Translates to: RFLLLAWWPSVTHPT*WPFTCGCVPSSCRL
Trigger: CAGACGGCAGGAAGATGGCACACAGCCACAGGTGAATGGCCAGCAGGTGGGATGTGTTACGGACGGCCACCACGCGAGCAGCAGGAAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS GCA 90 bp TTTGCACTCACAGGGCCCTCCCTGCCTGGACTGCTGACCACCACGTaGGGTACTCTCCTGCTGAGGGAGAGCAGAGGGAAGAGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: FALTGPSLPGLLTTT*GTLLLRESRGKSCL
Trigger: GAGGCAGCTCTTCCCTCTGCTCTCCCTCAGCAGGAGAGTACCGCACGTGGTGGTCAGCAGTCCAGGCAGGGAGGGCCCTGTGAGTGCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589254.1
CDS CCA 90 bp GTGGTGGCCGTCCGTAACACATCCCACCTGCTGGCCATTCACCTGTaGCTGTGTGCCATCTTCCTGCCGTCTGACAGCGGGCAGCTGTGC +
Preference number: 5 (lower is better)
Translates to: VVAVRNTSHLLAIHL*LCAIFLPSDSGQLC
Trigger: GCACAGCTGCCCGCTGTCAGACGGCAGGAAGATGGCACACAGCCACAGGTGAATGGCCAGCAGGTGGGATGTGTTACGGACGGCCACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CCA 90 bp GGCAGGTGCTACGCGGAGCTCCTGAATGTAAGCGCTCCTGGACTGTaGCCTGTTCAAACACCGAAGCCGCAGAGCGGGCGTCAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: GRCYAELLNVSAPGL*PVQTPKPQSGRQSL
Trigger: GAGGCTCTGACGCCCGCTCTGCGGCTTCGGTGTTTGAACAGGCCACAGTCCAGGAGCGCTTACATTCAGGAGCTCCGCGTAGCACCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS CCA 90 bp GGCAGGTGCTACGCGGAGCTCCTGAATGTAAGCGCTCCTGGACTGTaGCCTGTTCAAACACCGAAGCCGCAGAGCGGGCGTCAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: GRCYAELLNVSAPGL*PVQTPKPQSGRQSL
Trigger: CAGGCTCTGACGCCCGCTCTGCGGCTTCGGTGTTTGAACAGGCCACAGTCCAGGAGCGCTTACATTCAGGAGCTCCGCGTAGCACCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586896.2
ENST00000592275.5
CDS CCA 90 bp GGCAGGTGCTACGCGGAGCTCCTGAATGTAAGCGCTCCTGGACTGTaGCCTGTTCAAACACCGAAGCCGCAGAGCGGGCGTCAGAGCGTG +
Preference number: 5 (lower is better)
Translates to: GRCYAELLNVSAPGL*PVQTPKPQSGRQSV
Trigger: CACGCTCTGACGCCCGCTCTGCGGCTTCGGTGTTTGAACAGGCCACAGTCCAGGAGCGCTTACATTCAGGAGCTCCGCGTAGCACCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588365.1
CDS-3UTR CAA 90 bp GATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCGGGTCATCTCCACTCTaGTGGCGACTAGCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: DPTKPPRTSRTSPETALSGSSPL*WRLAPS
Trigger: AGAGGGAGCTAGTCGCCACAAGAGTGGAGATGACCC...GGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CAA 90 bp TGCCGCCACCACAGCCACCCGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTCACTGGATGGTGGCATaGAGAAAGCAGGTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: CRHHSHPILPSRPGPAGRHWMVA*RKQVLP
Trigger: TGGCAACACCTGCTTTCTCAATGCCACCATCCAGTG...ACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCGGGTGGCTGTGGTGGCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CAA 90 bp ACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCAGGAAATGAAGGAGACGGGCTaGATGGCGTTGCCGCTGTTG +
Preference number: 5 (lower is better)
Translates to: TKPPRTSRTSPETALSQEMKETG*MALPLL
Trigger: CAACAGCGGCAACGCCATCAAGCCCGTCTCCTTCAT...TTCCTGGGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CAA 90 bp ACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCACTGTGTCCGAGACGCTCTaGCACACGGAGCACTTCACG +
Preference number: 5 (lower is better)
Translates to: TSYAPGDHLGDMWPPSPTVSETL*HTEHFT
Trigger: CGTGAAGTGCTCCGTGTGCAAGAGCGTCTCGGACAC...AGTGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGTGTCCGAGACGCTCTaGCACACGGAGCACTTCACG +
Preference number: 5 (lower is better)
Translates to: LPQIQTDSSREGTPCLQEVSETL*HTEHFT
Trigger: CGTGAAGTGCTCCGTGTGCAAGAGCGTCTCGGACAC...CTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACCCAGGAGCCCTGCCTTaGGCTCCCAGATCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: RQLPGRDALSPGGCRTNHPGALP*APRSAA
Trigger: AGCAGCAGATCTGGGAGCCAAAGGCAGGGCTCCTGG...GTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CAA 90 bp CAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAATTCAGCCCATGCCCGTaGGCAGTGGCTGTAGCCAGG +
Preference number: 5 (lower is better)
Translates to: QQSPHRELPQIQTDSSREFSPCP*AVAVAR
Trigger: CCTGGCTACAGCCACTGCCAACGGGCATGGGCTGAA...TTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCACGTGCTCACTGCCTTCTaGGCAGAGGAGGCAAGAAGC +
Preference number: 5 (lower is better)
Translates to: QVLPRLWSPAPTRKTRSHVLTAF*AEEARS
Trigger: GCTTCTTGCCTCCTCTGCCAAGAAGGCAGTGAGCAC...GTGGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS GCA 90 bp CATCCCTGCTGTCCCAGGAGCCCTGCCTTTGGCTCCCAGATCTGCTaGTATTCGAGTTGCTGGTCCCAGGCAGCCCCTGAGCAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: HPCCPRSPAFGSQIC*YSSCWSQAAPEQFW
Trigger: CCAGAACTGCTCAGGGGCTGCCTGGGACCAGCAACTCGAATAGCAGCAGATCTGGGAGCCAAAGGCAGGGCTCCTGGGACAGCAGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS GCA 90 bp CCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTaGAGAACAAACCACGGTAGTCCTCCTTCCACAGGGGCACAGTCA +
Preference number: 5 (lower is better)
Translates to: PDRQLPGRDALSPGG*RTNHGSPPSTGAQS
Trigger: TGACTGTGCCCCTGTGGAAGGAGGACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587379.1
ENST00000592231.5
CDS GCA 90 bp CATCCACTTCGTCACCCCGGAGTGAGGGCCTCTCTGCCAGCACACTaGACATCTGTACCCTGTCTCCTGGCCGGTGGGTCATCTCCACTC +
Preference number: 5 (lower is better)
Translates to: HPLRHPGVRASLPAH*TSVPCLLAGGSSPL
Trigger: GAGTGGAGATGACCCACCGGCCAGGAGACAGGGTACAGATGTGCAGTGTGCTGGCAGAGAGGCCCTCACTCCGGGGTGACGAAGTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592907.5
CDS GCA 90 bp GGGTGGGGAAGCACGCACTTGGCACAGCCATTCAGGCAGGCTTTCTaGATGGCGTCGATGGTGTACCGCAGGAACTCATGCGCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: GWGSTHLAQPFRQAF*MASMVYRRNSCASS
Trigger: GGAGGACGCGCATGAGTTCCTGCGGTACACCATCGACGCCATGCAGAAAGCCTGCCTGAATGGCTGTGCCAAGTGCGTGCTTCCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CAA 90 bp AGCTTCCCTGGTGGCAGCTGCGAGCATGCTCCTTGGAGAGCAGGTAGTTGGCTATCATCAGCCGAGTCCTaGCGGCCGGGTTTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SFPGGSCEHAPWRAGSWLSSAES*RPGFRA
Trigger: GGCCCTGAAACCCGGCCGCAAGGACTCGGCTGATGA...TAGCCAACTACCTGCTCTCCAAGGAGCATGCTCGCAGCTGCCACCAGGGAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR CAA 90 bp GGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAAACGGGCTTGATGGCGTaGCCGCTGTTGGCGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GHLCSHTHCRFSCRAGRETGLMA*PLLAKA
Trigger: GGCCTTCGCCAACAGCGGCAACGCCATCAAGCCCGT...TTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGCTGACCGCCGACATCTaGCCATCCCAGGTCAGAACT +
Preference number: 5 (lower is better)
Translates to: LPQIQTDSSREGTPCLQELTADI*PSQVRT
Trigger: AGTTCTGACCTGGGATGGCAAGATGTCGGCGGTCAG...CTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCTCAAAGCCTCTGTGTaGGGCGGTCTGTGGACACTG +
Preference number: 5 (lower is better)
Translates to: LRSRPTAPGKGRLVSRRLLKASV*GGLWTL
Trigger: CAGTGTCCACAGACCGCCCAACACAGAGGCTTTGAG...CAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp TCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTCAAAGCCTCTGTGTaGGGCGGTCTGTGGACACTG +
Preference number: 5 (lower is better)
Translates to: SLRSRPTAPGKGRLVSRRLKASV*GGLWTL
Trigger: CAGTGTCCACAGACCGCCCAACACAGAGGCTTTGAG...CCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp GGTACCGGGAGAGCTCCTACCGTGACAGGCTCCCAGCGCAGCAGAGCCCACACAACACTGTCGTTTCTCTaGCAGGGCTGGTCGGGAATG +
Preference number: 5 (lower is better)
Translates to: GTGRAPTVTGSQRSRAHTTLSFL*QGWSGM
Trigger: CATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGT...TGTGTGGGCTCTGCTGCGCTGGGAGCCTGTCACGGTAGGAGCTCTCCCGGTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp AAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGAGAAGCAAGGGATGGCTaGCCCAGAGCCACCAGCTAT +
Preference number: 5 (lower is better)
Translates to: KGWLAQSHQLCTGRPPGGEARDG*PRATSY
Trigger: ATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTC...TCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp CCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCATATTGCACCAAGATCTaGGCAACACGTGGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: PPAMHRETTWGTCGHHPPYCTKI*ATRGAP
Trigger: GGGAGCCCCACGTGTTGCCAAGATCTTGGTGCAATA...TGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS TCA 90 bp CTTCAGCCCATGCCCGTTGGCAGTGGCTGTAGCCAGGAGCTTAGGTaGGGTAGAGAGGACAACATCCCTGCTGTCCCAGGAGCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: LQPMPVGSGCSQELR*GREDNIPAVPGALP
Trigger: AGGCAGGGCTCCTGGGACAGCAGGGATGTTGTCCTCTCTACCTCACCTAAGCTCCTGGCTACAGCCACTGCCAACGGGCATGGGCTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS TCA 90 bp TCGGAACCGACCTCCTTCCACAGGGGCACAGTCAGCGGCGATAGCTaGGGCTGGCAGCCTTTGCTGGGTGAGTCACAGACCAGAAGTTCC +
Preference number: 5 (lower is better)
Translates to: SEPTSFHRGTVSGDS*GWQPLLGESQTRSS
Trigger: GGAACTTCTGGTCTGTGACTCACCCAGCAAAGGCTGCCAGCCTCAGCTATCGCCGCTGACTGTGCCCCTGTGGAAGGAGGTCGGTTCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS TCA 90 bp TCTCCAGGAGGCTCCTTCCACAGGGGCACAGTCAGCGGCGATAGCTaGGGCTGGCAGCCTTTGCTGGGTGAGTCACAGACCAGAAGTTCC +
Preference number: 5 (lower is better)
Translates to: SPGGSFHRGTVSGDS*GWQPLLGESQTRSS
Trigger: GGAACTTCTGGTCTGTGACTCACCCAGCAAAGGCTGCCAGCCTCAGCTATCGCCGCTGACTGTGCCCCTGTGGAAGGAGCCTCCTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000587010.5
CDS GCA 90 bp CAACATCCCTGCTGTCCCAGGAGCCCTGCCTTTGGCTCCCAGATCTaGTGCTATTCGAGTTGCTGGTCCCAGGCAGCCCCTGAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: QHPCCPRSPAFGSQI*CYSSCWSQAAPEQF
Trigger: GAACTGCTCAGGGGCTGCCTGGGACCAGCAACTCGAATAGCAGCAGATCTGGGAGCCAAAGGCAGGGCTCCTGGGACAGCAGGGATGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CCA 90 bp TTGGTTGGGCAGGTGCTACGCGGAGCTCCTGAATGTAAGCGCTCCTaGACTGTGGCCTGTTCAAACACCGAAGCCGCAGAGCGGGCGTCA +
Preference number: 5 (lower is better)
Translates to: LVGQVLRGAPECKRS*TVACSNTEAAERAS
Trigger: TGACGCCCGCTCTGCGGCTTCGGTGTTTGAACAGGCCACAGTCCAGGAGCGCTTACATTCAGGAGCTCCGCGTAGCACCTGCCCAACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000587783.5
ENST00000588086.5
ENST00000588365.1
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000591942.6
ENST00000592275.5
ENST00000592907.5
CDS CCA 90 bp TTCCTGCTGCTCGCGTGGTGGCCGTCCGTAACACATCCCACCTGCTaGCCATTCACCTGTGGCTGTGTGCCATCTTCCTGCCGTCTGACA +
Preference number: 5 (lower is better)
Translates to: FLLLAWWPSVTHPTC*PFTCGCVPSSCRLT
Trigger: TGTCAGACGGCAGGAAGATGGCACACAGCCACAGGTGAATGGCCAGCAGGTGGGATGTGTTACGGACGGCCACCACGCGAGCAGCAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS-3UTR CAA 90 bp CACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGAGAGGTCATCAGCCGAGTCCTaGCGGCCGGGTTTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: HGSQALIFEHSETGPQERSSAES*RPGFRA
Trigger: GGCCCTGAAACCCGGCCGCAAGGACTCGGCTGATGA...CCTCTCCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp AGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGGTCATCTCCACTCTaGTGGCGACTAGCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: SRAHTESSLRSRPTAPGKGSSPL*WRLAPS
Trigger: AGAGGGAGCTAGTCGCCACAAGAGTGGAGATGACCC...CTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTCAGGTGTTGCCAAGGTaGTGGAGTCCTGCGCCCACG +
Preference number: 5 (lower is better)
Translates to: QVCGHLCSHTHCRFSCRAQVLPR*WSPAPT
Trigger: CGTGGGCGCAGGACTCCACAACCTTGGCAACACCTG...AGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCACCACTGGATGGTGGCATaGAGAAAGCAGGTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: QVLPRLWSPAPTRKTRSHHWMVA*RKQVLP
Trigger: TGGCAACACCTGCTTTCTCAATGCCACCATCCAGTG...GTGGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR CAA 90 bp GCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGATGGATGGTGAAGCGCTaGCTGGCTGGAACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: AAEPTQRAPSDPDRQLPGWMVKR*LAGTFF
Trigger: GAAGAAGGTTCCAGCCAGCAAGCGCTTCACCATCCA...TCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp GTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGAGGAAATGACGCCACTTGGCGGCGTTTaGGAGTGGCCAGCGGTGGAA +
Preference number: 5 (lower is better)
Translates to: VQHHVVHLHLRRLREEMTPLGGV*EWPAVE
Trigger: TTCCACCGCTGGCCACTCCAAAACGCCGCCAAGTGG...CGTCATTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGAGGGTGCTGGCCTTCTaGGCAGAAAGGGCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: LRSRPTAPGKGRLVSRRLRVLAF*AERASF
Trigger: AAAACTGGCCCTTTCTGCCAAGAAGGCCAGCACCCT...CAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CAA 90 bp ATGAGAAGGCACAGCCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTGACGTCCCTGGGGGCTaGGGGGTACTGGACAGCAAT +
Preference number: 5 (lower is better)
Translates to: MRRHSLAKMSSRCAATSADVPGG*GVLDSN
Trigger: ATTGCTGTCCAGTACCCCCAAGCCCCCAGGGACGTC...AGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGGCTGTGCCTTCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp TCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGACAGCATCTTGGGGCTaGGCACTCCTTGGGCATTTG +
Preference number: 5 (lower is better)
Translates to: SLRSRPTAPGKGRLVSRRTASWG*ALLGHL
Trigger: CAAATGCCCAAGGAGTGCCAAGCCCCAAGATGCTGT...CCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGAGAGGCCGGGAAGGGACGCCTaGTCTCCAGGAGGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: HGSQALIFEHSETGPQERPGRDA*SPGGCR
Trigger: TCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGG...CCTCTCCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587379.1
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp AGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACACTGTCGTTTCTCTaGCAGGGCTGGTCGGGAATG +
Preference number: 5 (lower is better)
Translates to: SPEKQGMACPEPPAMHRETLSFL*QGWSGM
Trigger: CATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGT...CTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp AAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGAAAGTCCAACACCACGTaGTCCATCTCCACCTGCGAC +
Preference number: 5 (lower is better)
Translates to: KGWLAQSHQLCTGRPPGGKSNTT*SISTCD
Trigger: GTCGCAGGTGGAGATGGACAACGTGGTGTTGGACTT...TCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp CTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGCCCTTCCCTATCTGGTaGATGACTTCGGTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: LPQIQTDSSREGTPCLQEPFPIW*MTSVEG
Trigger: TCCCTCCACCGAAGTCATCAACCAGATAGGGAAGGG...CTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR CAA 90 bp TGCCGCCACCACAGCCACCCGATCCTACCAAGCCGCCCCGGACCAGCAGGACGTTTGGGCTCCAACAGTTaGAGTACCCAGAGGCAAATT +
Preference number: 5 (lower is better)
Translates to: CRHHSHPILPSRPGPAGRLGSNS*STQRQI
Trigger: AATTTGCCTCTGGGTACTCAAACTGTTGGAGCCCAA...ACGTCCTGCTGGTCCGGGGCGGCTTGGTAGGATCGGGTGGCTGTGGTGGCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS GCA 90 bp CCAGCGCGACGTCCAAGTAGGGGTCGTAGGTGTCCGAGACGCTCTTaGACACGGAGCACTTCACTGCAACAGAACAGAGGCAGTGGAGCA +
Preference number: 5 (lower is better)
Translates to: PARRPSRGRRCPRRS*TRSTSLQQNRGSGA
Trigger: TGCTCCACTGCCTCTGTTCTGTTGCAGTGAAGTGCTCCGTGTGCAAGAGCGTCTCGGACACCTACGACCCCTACTTGGACGTCGCGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589254.1
CDS CCA 90 bp GAGGTAGAGAGGACAACATCCCTGCTGTCCCAGGAGCCCTGCCTTTaGCTCCCAGATCTGCTGCTATTCGAGTTGCTGGTCCCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: EVERTTSLLSQEPCL*LPDLLLFELLVPGS
Trigger: GCTGCCTGGGACCAGCAACTCGAATAGCAGCAGATCTGGGAGCCAAAGGCAGGGCTCCTGGGACAGCAGGGATGTTGTCCTCTCTACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CCA 90 bp AAAGGTGTCCAAAGCCCTGGGAGGGTGGGTGGGGAAGCACGCACTTaGCACAGCCATTCAGGCAGGCTTTCTGCATGGCGTCGATGGTGT +
Preference number: 5 (lower is better)
Translates to: KGVQSPGRVGGEART*HSHSGRLSAWRRWC
Trigger: ACACCATCGACGCCATGCAGAAAGCCTGCCTGAATGGCTGTGCCAAGTGCGTGCTTCCCCACCCACCCTCCCAGGGCTTTGGACACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CAA 90 bp ATGAGAAGGCACAGCCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTAACGGAGGGCTGAGTTaGGTTGGGCAGGTGCTACGC +
Preference number: 5 (lower is better)
Translates to: MRRHSLAKMSSRCAATSANGGLS*VGQVLR
Trigger: GCGTAGCACCTGCCCAACCAAACTCAGCCCTCCGTT...AGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGGCTGTGCCTTCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp AGCTTCCCTGGTGGCAGCTGCGAGCATGCTCCTTGGAGAGCAGGTAGTTGGCTAAACGGAGGGCTGAGTTaGGTTGGGCAGGTGCTACGC +
Preference number: 5 (lower is better)
Translates to: SFPGGSCEHAPWRAGSWLNGGLS*VGQVLR
Trigger: GCGTAGCACCTGCCCAACCAAACTCAGCCCTCCGTT...TAGCCAACTACCTGCTCTCCAAGGAGCATGCTCGCAGCTGCCACCAGGGAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR CAA 90 bp CACAGGTGCGGCCATGCAACCAGGACGCGGGGCAGGCAAGTGAGAGGACCTGGGCCCTCTGTTTTGGGGTaGAGCAACACATATTTGCTC +
Preference number: 5 (lower is better)
Translates to: HRCGHATRTRGRQVRGPGPSVLG*SNTYLL
Trigger: GAGCAAATATGTGTTGCTCAACCCCAAAACAGAGGG...CCCAGGTCCTCTCACTTGCCTGCCCCGCGTCCTGGTTGCATGGCCGCACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR CAA 90 bp CCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCAGGAAGCTAGCTCCCTCTGTTTaGGGGTTGAGCAACACATAT +
Preference number: 5 (lower is better)
Translates to: PSRPGPAGRLRRQPFPRKLAPSV*GLSNTY
Trigger: ATATGTGTTGCTCAACCCCAAAACAGAGGGAGCTAG...CTTCCTGGGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CAA 90 bp GGAACCCAATGCATGGCATCTCGATGCGGCTGGCAAGAAGTCACCCTTCTGCAAACGGGCTTGATGGCGTaGCCGCTGTTGGCGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GTQCMASRCGWQEVTLLQTGLMA*PLLAKA
Trigger: GGCCTTCGCCAACAGCGGCAACGCCATCAAGCCCGT...TTGCAGAAGGGTGACTTCTTGCCAGCCGCATCGAGATGCCATGCATTGGGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CAA 90 bp TCTAGAGAAGCCTCAAAGCCTCTGTGTTGGGCGGTCTGTGGACACTGGTACCGGCCACTTGGCGGCGTTTaGGAGTGGCCAGCGGTGGAA +
Preference number: 5 (lower is better)
Translates to: SREASKPLCWAVCGHWYRPLGGV*EWPAVE
Trigger: TTCCACCGCTGGCCACTCCAAAACGCCGCCAAGTGG...CCGGTACCAGTGTCCACAGACCGCCCAACACAGAGGCTTTGAGGCTTCTCTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp AAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGACCACCTGGGGGAGAAAGGGCCAGTTTTTaGGCTGGTGGAGGAGACATG +
Preference number: 5 (lower is better)
Translates to: KGWLAQSHQLCTGRPPGGERASF*AGGGDM
Trigger: CATGTCTCCTCCACCAGCCAAAAAACTGGCCCTTTC...TCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp GCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGAAAGGGCCAGTTTTTaGGCTGGTGGAGGAGACATG +
Preference number: 5 (lower is better)
Translates to: AEPTQRAPSDPDRQLPGRERASF*AGGGDM
Trigger: CATGTCTCCTCCACCAGCCAAAAAACTGGCCCTTTC...CCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp GCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGACGTCCCTGGGGGCTaGGGGGTACTGGACAGCAAT +
Preference number: 5 (lower is better)
Translates to: ATSAHTHTVVSLAGLVGNDVPGG*GVLDSN
Trigger: ATTGCTGTCCAGTACCCCCAAGCCCCCAGGGACGTC...ATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp TCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCCTCAAAGCCTCTGTGTaGGGCGGTCTGTGGACACTG +
Preference number: 5 (lower is better)
Translates to: SREGTPCLQEAAEQTTVVLKASV*GGLWTL
Trigger: CAGTGTCCACAGACCGCCCAACACAGAGGCTTTGAG...GACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp TCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCGAAGCAAGGGATGGCTaGCCCAGAGCCACCAGCTAT +
Preference number: 5 (lower is better)
Translates to: SREGTPCLQEAAEQTTVVEARDG*PRATSY
Trigger: ATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTC...GACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp CCACCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCATGCTCTCCAGGACAGTaGAGAGCTACTCACAAGGAA +
Preference number: 5 (lower is better)
Translates to: PPAMHRETTWGTCGHHPPCSPGQ*RATHKE
Trigger: TTCCTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCA...TGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp CGTCAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGAAGACCTGCGGGTTATaGCAGCTGCAAGGGAAGCTA +
Preference number: 5 (lower is better)
Translates to: RQPREARDGLPRATSYAPKTCGL*QLQGKL
Trigger: TAGCTTCCCTTGCAGCTGCAATAACCCGCAGGTCTT...CGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp AGGAAGCAGGGGAGGGCGGGCTCGGACACAACGGTGGCGTCAGCCCCGAGAAGCGGGAAAGGAAACATATaGCTAATGGAAGCCACAGGA +
Preference number: 5 (lower is better)
Translates to: RKQGRAGSDTTVASAPRSGKGNI*LMEATG
Trigger: TCCTGTGGCTTCCATTAGCAATATGTTTCCTTTCCC...GCTTCTCGGGGCTGACGCCACCGTTGTGTCCGAGCCCGCCCTCCCCTGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp ACCAAGCCGCCCCGGACCAGCAGGACGTCTCCGGAGACAGCCCTTTCCCAGGAAAGGGCAATCCCCTATTaGGGCTCCAACAGTTTGAGT +
Preference number: 5 (lower is better)
Translates to: TKPPRTSRTSPETALSQERAIPY*GSNSLS
Trigger: ACTCAAACTGTTGGAGCCCAAATAGGGGATTGCCCT...TTCCTGGGAAAGGGCTGTCTCCGGAGACGTCCTGCTGGTCCGGGGCGGCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS TCA 90 bp TGGCGTTGCCGCTGTTGGCGAAGGCCTGGACAATGTGGTTCTGCATaGCACACAGCATGCAGAAGCTTCCCTGGTGGCAGCTGCGAGCAT +
Preference number: 5 (lower is better)
Translates to: WRCRCWRRPGQCGSA*HTACRSFPGGSCEH
Trigger: ATGCTCGCAGCTGCCACCAGGGAAGCTTCTGCATGCTGTGTGTCATGCAGAACCACATTGTCCAGGCCTTCGCCAACAGCGGCAACGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
CDS TCA 90 bp CGCTTGATCATCTCCTTCCACAGGGGCACAGTCAGCGGCGATAGCTaGGGCTGGCAGCCTTTGCTGGGTGAGTCACAGACCAGAAGTTCC +
Preference number: 5 (lower is better)
Translates to: RLIISFHRGTVSGDS*GWQPLLGESQTRSS
Trigger: GGAACTTCTGGTCTGTGACTCACCCAGCAAAGGCTGCCAGCCTCAGCTATCGCCGCTGACTGTGCCCCTGTGGAAGGAGATGATCAAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588130.5
CDS CCA 90 bp TGCATGGCGTCGATGGTGTACCGCAGGAACTCATGCGCGTCCTCCTaGTTCCCAAAGCGGAAGTGTCGGGCGATCTTTTTCAGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: CMASMVYRRNSCASS*FPKRKCRAIFFRSR
Trigger: CCGAGACCTGAAAAAGATCGCCCGACACTTCCGCTTTGGGAACCAGGAGGACGCGCATGAGTTCCTGCGGTACACCATCGACGCCATGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586066.3
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
CDS CCA 90 bp GCTGCTGGACTCGGGGACAACAGCATCTTGGGGCTTGGCACTCCTTaGGCATTTGAGATGCCCATCCTCTTCTACTGCCCGCTGTGTCTC +
Preference number: 5 (lower is better)
Translates to: AAGLGDNSILGLGTP*AFEMPILFYCPLCL
Trigger: GAGACACAGCGGGCAGTAGAAGAGGATGGGCATCTCAAATGCCCAAGGAGTGCCAAGCCCCAAGATGCTGTTGTCCCCGAGTCCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS CCA 90 bp TTCGCGGATGGTGCGCAGCTGCTGGACTCGGGGACAACAGCATCTTaGGGCTTGGCACTCCTTGGGCATTTGAGATGCCCATCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: FADGAQLLDSGTTAS*GLALLGHLRCPSSS
Trigger: AGAAGAGGATGGGCATCTCAAATGCCCAAGGAGTGCCAAGCCCCAAGATGCTGTTGTCCCCGAGTCCAGCAGCTGCGCACCATCCGCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS CCA 90 bp CCCAAGACCGAGACCCAGCAGGGAGGCAGACTCTCAGCAGGGCTTTaGCCAAAGATGAGATTCCCACTAGCCCCTGAAGCATCCTGGTGT +
Preference number: 5 (lower is better)
Translates to: PKTETQQGGRLSAGL*PKMRFPLAPEASWC
Trigger: ACACCAGGATGCTTCAGGGGCTAGTGGGAATCTCATCTTTGGCCAAAGCCCTGCTGAGAGTCTGCCTCCCTGCTGGGTCTCGGTCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589254.1
CDS CCA 90 bp CTCTCTGCCAGCACACTGCACATCTGTACCCTGTCTCCTGGCCGGTaGGTCATCTCCACTCTTGTGGCGACTAGCTCCCTCTGTTTTGGG +
Preference number: 5 (lower is better)
Translates to: LSASTLHICTLSPGR*VISTLVATSSLCFG
Trigger: CCCAAAACAGAGGGAGCTAGTCGCCACAAGAGTGGAGATGACCCACCGGCCAGGAGACAGGGTACAGATGTGCAGTGTGCTGGCAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592907.5
CDS-3UTR CAA 90 bp AGCAGGTGTTGCCAAGGTTGTGGAGTCCTGCGCCCACGCGGAAGACCCGCTCCCTCAACTTATCCACTATaGGCATGGTGCATCACTGGG +
Preference number: 5 (lower is better)
Translates to: SRCCQGCGVLRPRGRPAPSTYPL*AWCITG
Trigger: CCCAGTGATGCACCATGCCAATAGTGGATAAGTTGA...GGGAGCGGGTCTTCCGCGTGGGCGCAGGACTCCACAACCTTGGCAACACCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591942.6
CDS-3UTR CAA 90 bp AGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCTAGAGAAGCCTCAAAGCTCATCAGCCGAGTCCTaGCGGCCGGGTTTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: RAGRECHQRGSDLEKPQSSSAES*RPGFRA
Trigger: GGCCCTGAAACCCGGCCGCAAGGACTCGGCTGATGA...GCTTTGAGGCTTCTCTAGATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CTGGGACACATGCCAGATATACACACAACCCACATCCCACACACACCCCACACATCATCAGCCGAGTCCTaGCGGCCGGGTTTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: LGHMPDIHTTHIPHTPHTSSAES*RPGFRA
Trigger: GGCCCTGAAACCCGGCCGCAAGGACTCGGCTGATGA...TGTGTGGGGTGTGTGTGGGATGTGGGTTGTGTGTATATCTGGCATGTGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CAA 90 bp GATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTATGGCGTTGCCGCTGTaGGCGAAGGCCTGGACAATG +
Preference number: 5 (lower is better)
Translates to: DVQQVCGHLCSHTHCRFSMALPL*AKAWTM
Trigger: CATTGTCCAGGCCTTCGCCAACAGCGGCAACGCCAT...AGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp GGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCCTGACAGAGATGAAGGAGACGGGCTaGATGGCGTTGCCGCTGTTG +
Preference number: 5 (lower is better)
Translates to: GTPCLQEAAEQTTVVLTEMKETG*MALPLL
Trigger: CAACAGCGGCAACGCCATCAAGCCCGTCTCCTTCAT...CTCTGTCAGGACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CAA 90 bp GGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAAATGAAGGAGACGGGCTaGATGGCGTTGCCGCTGTTG +
Preference number: 5 (lower is better)
Translates to: GHLCSHTHCRFSCRAGREMKETG*MALPLL
Trigger: CAACAGCGGCAACGCCATCAAGCCCGTCTCCTTCAT...TTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGAAGTTGGCAAAGCGCTaGAGGGAAAGGGTTAAGACG +
Preference number: 5 (lower is better)
Translates to: QSPHRELPQIQTDSSREGKLAKR*RERVKT
Trigger: CGTCTTAACCCTTTCCCTCAAGCGCTTTGCCAACTT...CCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp GGCGTCAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACAAGTTGGCAAAGCGCTaGAGGGAAAGGGTTAAGACG +
Preference number: 5 (lower is better)
Translates to: GVSPEKQGMACPEPPAMHKLAKR*RERVKT
Trigger: CGTCTTAACCCTTTCCCTCAAGCGCTTTGCCAACTT...GTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTGACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACTGGTTCAGAACCACCTaGACGTTGCTGGAATGGACC +
Preference number: 5 (lower is better)
Translates to: RQLPGRDALSPGGCRTNHWFRTT*TLLEWT
Trigger: GGTCCATTCCAGCAACGTCAAGGTGGTTCTGAACCA...GTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CAA 90 bp GCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATACCCCGAGGGCAGCTTaGGAGGAATGCAGCCGTTCT +
Preference number: 5 (lower is better)
Translates to: ATSAHTHTVVSLAGLVGNTPRAA*EECSRS
Trigger: AGAACGGCTGCATTCCTCCAAAGCTGCCCTCGGGGT...ATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CACAGGCCCCACTCCCTCCAGCTCCATTCCCAAGCACAAAATTCAACAGACCCACTGCTGCTATTCGAGTaGCTGGTCCCAGGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: HRPHSLQLHSQAQNSTDPLLLFE*LVPGSP
Trigger: GGGGCTGCCTGGGACCAGCAACTCGAATAGCAGCAG...TGGGTCTGTTGAATTTTGTGCTTGGGAATGGAGCTGGAGGGAGTGGGGCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR CAA 90 bp CCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAAGCTGCTGCTATTCGAGTaGCTGGTCCCAGGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PPTPNSLCSPGQLRATHKLLLFE*LVPGSP
Trigger: GGGGCTGCCTGGGACCAGCAACTCGAATAGCAGCAG...CTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAAGTTCAGCCCATGCCCGTaGGCAGTGGCTGTAGCCAGG +
Preference number: 5 (lower is better)
Translates to: PPTPNSLCSPGQLRATHKFSPCP*AVAVAR
Trigger: CCTGGCTACAGCCACTGCCAACGGGCATGGGCTGAA...CTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp GGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAAGAGGAGACATGGTGCTaGCAGGCTCAGTGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: GHLCSHTHCRFSCRAGREEETWC*QAQWWC
Trigger: ACACCACCACTGAGCCTGCAAGCACCATGTCTCCTC...TTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTGAGGAGACATGGTGCTaGCAGGCTCAGTGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: PGKDVQQVCGHLCSHTHCEETWC*QAQWWC
Trigger: ACACCACCACTGAGCCTGCAAGCACCATGTCTCCTC...ACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp GGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCCTGACAGAGCTGACCGCCGACATCTaGCCATCCCAGGTCAGAACT +
Preference number: 5 (lower is better)
Translates to: GTPCLQEAAEQTTVVLTELTADI*PSQVRT
Trigger: AGTTCTGACCTGGGATGGCAAGATGTCGGCGGTCAG...CTCTGTCAGGACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CAA 90 bp AGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGCCAGGCCCTCATCTTaGAACATTCAGAGACTGGTC +
Preference number: 5 (lower is better)
Translates to: SRAHTESSLRSRPTAPGKARPSS*NIQRLV
Trigger: GACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGC...CTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542802.7
ENST00000587379.1
ENST00000589225.5
ENST00000592231.5
CDS TCA 90 bp CCTGCTGTCCTACTGCGGCATGGAACCAGGATCTTAACGGAGGGCTaGGTTTGGTTGGGCAGGTGCTACGCGGAGCTCCTGAATGTAAGC +
Preference number: 5 (lower is better)
Translates to: PAVLLRHGTRILTEG*VWLGRCYAELLNVS
Trigger: GCTTACATTCAGGAGCTCCGCGTAGCACCTGCCCAACCAAACTCAGCCCTCCGTTAAGATCCTGGTTCCATGCCGCAGTAGGACAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000587783.5
ENST00000588086.5
ENST00000588365.1
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000591942.6
ENST00000592275.5
ENST00000592907.5
CDS GCA 90 bp TTGATGGCGTTGCCGCTGTTGGCGAAGGCCTGGACAATGTGGTTCTaGATGACACACAGCATGCAGAAGCTTCCCTGGTGGCAGCTGCGA +
Preference number: 5 (lower is better)
Translates to: LMALPLLAKAWTMWF*MTHSMQKLPWWQLR
Trigger: TCGCAGCTGCCACCAGGGAAGCTTCTGCATGCTGTGTGTCATGCAGAACCACATTGTCCAGGCCTTCGCCAACAGCGGCAACGCCATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
CDS GCA 90 bp GGCAAATTCTGCCACGTCTACCCAAGGGCAGCCTGGGTAGAAAGGTaGCGGGCTGGCTGTTGCCATAGGAATGTTCTGCTGCCACCATGT +
Preference number: 5 (lower is better)
Translates to: GKFCHVYPRAAWVER*RAGCCHRNVLLPPC
Trigger: ACATGGTGGCAGCAGAACATTCCTATGGCAACAGCCAGCCCGGCACCTTTCTACCCAGGCTGCCCTTGGGTAGACGTGGCAGAATTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS CCA 90 bp CATCACTGGGATGTGCAGACTTGGGCCTGCTGTCCTACTGCGGCATaGAACCAGGATCTTAACGGAGGGCTGAGTTTGGTTGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: HHWDVQTWACCPTAA*NQDLNGGLSLVGQV
Trigger: CACCTGCCCAACCAAACTCAGCCCTCCGTTAAGATCCTGGTTCCATGCCGCAGTAGGACAGCAGGCCCAAGTCTGCACATCCCAGTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000587783.5
ENST00000588086.5
ENST00000588365.1
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000591942.6
ENST00000592275.5
ENST00000592907.5
CDS CCA 90 bp AGCCGTTCTGGGACTTCAGGCCCAGGGTGGAGCCATTCCTGGATATaGGCACACCAATCTCTTCAGTGGTGTGCGGCTTCTTCATCGTCC +
Preference number: 5 (lower is better)
Translates to: SRSGTSGPGWSHSWI*AHQSLQWCAASSSS
Trigger: GGACGATGAAGAAGCCGCACACCACTGAAGAGATTGGTGTGCCCATATCCAGGAATGGCTCCACCCTGGGCCTGAAGTCCCAGAACGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CCA 90 bp ACAGGGGCACAGTCAGCGGCGATAGCTGAGGCTGGCAGCCTTTGCTaGGTGAGTCACAGACCAGAAGTTCCGTCGAGTCTGAAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: TGAQSAAIAEAGSLC*VSHRPEVPSSLKFL
Trigger: CAGAAACTTCAGACTCGACGGAACTTCTGGTCTGTGACTCACCCAGCAAAGGCTGCCAGCCTCAGCTATCGCCGCTGACTGTGCCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000587010.5
ENST00000588130.5
ENST00000589225.5
ENST00000592231.5
CDS CCA 90 bp TTCTGCTGCCACCATGTAGAAAAGGTGTCCAAAGCCCTGGGAGGGTaGGTGGGGAAGCACGCACTTGGCACAGCCATTCAGGCAGGCTTT +
Preference number: 5 (lower is better)
Translates to: FCCHHVEKVSKALGG*VGKHALGTAIQAGF
Trigger: AAAGCCTGCCTGAATGGCTGTGCCAAGTGCGTGCTTCCCCACCCACCCTCCCAGGGCTTTGGACACCTTTTCTACATGGTGGCAGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CAA 90 bp CGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGTTGAGCAACACATATTaGCTCTTTAAGGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RSRAHTESSLRSRPTAPGLSNTY*LFKASS
Trigger: GCTGGAGGCCTTAAAGAGCAAATATGTGTTGCTCAA...CCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CTCTGTGTTGGGCGGTCTGTGGACACTGGTACCGGGAGAGCTCCTACCGTGACACACTGGATGGTGGCATaGAGAAAGCAGGTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: LCVGRSVDTGTGRAPTVTHWMVA*RKQVLP
Trigger: TGGCAACACCTGCTTTCTCAATGCCACCATCCAGTG...TGTCACGGTAGGAGCTCTCCCGGTACCAGTGTCCACAGACCGCCCAACACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACAAACCACGGTAGTCACTGGATGGTGGCATaGAGAAAGCAGGTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: LPGRDALSPGGCRTNHGSHWMVA*RKQVLP
Trigger: TGGCAACACCTGCTTTCTCAATGCCACCATCCAGTG...ACTACCGTGGTTTGTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CAA 90 bp GGAACCCAATGCATGGCATCTCGATGCGGCTGGCAAGAAGTCACCCTTCTGCAAATGGCGTTGCCGCTGTaGGCGAAGGCCTGGACAATG +
Preference number: 5 (lower is better)
Translates to: GTQCMASRCGWQEVTLLQMALPL*AKAWTM
Trigger: CATTGTCCAGGCCTTCGCCAACAGCGGCAACGCCAT...TTGCAGAAGGGTGACTTCTTGCCAGCCGCATCGAGATGCCATGCATTGGGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CAA 90 bp TCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGCAGAACGAAAGGGTTAAGACGTaGGATGTTCTGTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: SRPTAPGKGRLVSRRLQNERVKT*DVLWMV
Trigger: CACCATCCACAGAACATCCAACGTCTTAACCCTTTC...GTTCTGCAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CAA 90 bp CCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCGAGGAAATAATCCCATaGCCGATGTTCTTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: PTQRAPSDPDRQLPGRDAEEIIP*PMFFLE
Trigger: CTCCAAGAAGAACATCGGCAATGGGATTATTTCCTC...GGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp AGCCACACTGAAGGAGGTCTAAGTCCAACACCACGTTGTCCATCTCCACCTGCGACCCCGAGGGCAGCTTaGGAGGAATGCAGCCGTTCT +
Preference number: 5 (lower is better)
Translates to: SHTEGGLSPTPRCPSPPATPRAA*EECSRS
Trigger: AGAACGGCTGCATTCCTCCAAAGCTGCCCTCGGGGT...CGCAGGTGGAGATGGACAACGTGGTGTTGGACTTAGACCTCCTTCAGTGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp ATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACACAGCATCTTGGGGCTaGGCACTCCTTGGGCATTTG +
Preference number: 5 (lower is better)
Translates to: IRRYRGLLRPQIASALQDTASWG*ALLGHL
Trigger: CAAATGCCCAAGGAGTGCCAAGCCCCAAGATGCTGT...GTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp AGGAGGTCTAAGTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGACAGCATCTTGGGGCTaGGCACTCCTTGGGCATTTG +
Preference number: 5 (lower is better)
Translates to: RRSKSNTTLSISTCDDSGTASWG*ALLGHL
Trigger: CAAATGCCCAAGGAGTGCCAAGCCCCAAGATGCTGT...CCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGACTTAGACCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp GATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTCTCAAAGCCTCTGTGTaGGGCGGTCTGTGGACACTG +
Preference number: 5 (lower is better)
Translates to: DVQQVCGHLCSHTHCRFSLKASV*GGLWTL
Trigger: CAGTGTCCACAGACCGCCCAACACAGAGGCTTTGAG...AGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp GGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAACCCTTCCCTATCTGGTaGATGACTTCGGTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: GHLCSHTHCRFSCRAGREPFPIW*MTSVEG
Trigger: TCCCTCCACCGAAGTCATCAACCAGATAGGGAAGGG...TTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS TCA 90 bp GTCAGTGGGGAGGAAATAATCCCATTGCCGATGTTCTTCTTGGAGTaGTCTGGAATCACACTCGGGCGGCCGGGAAGGGAGGAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: VSGEEIIPLPMFFLE*SGITLGRPGREEEP
Trigger: AGGCTCCTCCTCCCTTCCCGGCCGCCCGAGTGTGATTCCAGATCACTCCAAGAAGAACATCGGCAATGGGATTATTTCCTCCCCACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586066.3
ENST00000588086.5
ENST00000588467.5
ENST00000589225.5
CDS TCA 90 bp ACTCGGGGACAACAGCATCTTGGGGCTTGGCACTCCTTGGGCATTTaGGATGCCCATCCTCTTCTACTGCCCGCTGTGTCTCCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: TRGQQHLGAWHSLGI*DAHPLLLPAVSPAF
Trigger: GAAAGCAGGAGACACAGCGGGCAGTAGAAGAGGATGGGCATCTCAAATGCCCAAGGAGTGCCAAGCCCCAAGATGCTGTTGTCCCCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS GCA 90 bp GGTGTTGCTCAGGACAGGGGACTTCAGCTTCACCGTCTTAGAATCTaGTCCACTTGGCGGCGTTTTGGAGTGGCCAGCGGTGGAACAGTT +
Preference number: 5 (lower is better)
Translates to: GVAQDRGLQLHRLRI*STWRRFGVASGGTV
Trigger: AACTGTTCCACCGCTGGCCACTCCAAAACGCCGCCAAGTGGAGCAGATTCTAAGACGGTGAAGCTGAAGTCCCCTGTCCTGAGCAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CCA 90 bp ATGAAGGAGACGGGCTTGATGGCGTTGCCGCTGTTGGCGAAGGCCTaGACAATGTGGTTCTGCATGACACACAGCATGCAGAAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: MKETGLMALPLLAKA*TMWFCMTHSMQKLP
Trigger: GGGAAGCTTCTGCATGCTGTGTGTCATGCAGAACCACATTGTCCAGGCCTTCGCCAACAGCGGCAACGCCATCAAGCCCGTCTCCTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
CDS CCA 90 bp TGGGGAGGAAATAATCCCATTGCCGATGTTCTTCTTGGAGTGATCTaGAATCACACTCGGGCGGCCGGGAAGGGAGGAGGAGCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: WGGNNPIADVLLGVI*NHTRAAGKGGGACP
Trigger: AGGACAGGCTCCTCCTCCCTTCCCGGCCGCCCGAGTGTGATTCCAGATCACTCCAAGAAGAACATCGGCAATGGGATTATTTCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586066.3
ENST00000588086.5
ENST00000588467.5
ENST00000589225.5
CDS CCA 90 bp GAATGCAGCCGTTCTGGGACTTCAGGCCCAGGGTGGAGCCATTCCTaGATATGGGCACACCAATCTCTTCAGTGGTGTGCGGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: ECSRSGTSGPGWSHS*IWAHQSLQWCAASS
Trigger: TGAAGAAGCCGCACACCACTGAAGAGATTGGTGTGCCCATATCCAGGAATGGCTCCACCCTGGGCCTGAAGTCCCAGAACGGCTGCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CCA 90 bp GCAGCTTTGGAGGAATGCAGCCGTTCTGGGACTTCAGGCCCAGGGTaGAGCCATTCCTGGATATGGGCACACCAATCTCTTCAGTGGTGT +
Preference number: 5 (lower is better)
Translates to: AALEECSRSGTSGPG*SHSWIWAHQSLQWC
Trigger: ACACCACTGAAGAGATTGGTGTGCCCATATCCAGGAATGGCTCCACCCTGGGCCTGAAGTCCCAGAACGGCTGCATTCCTCCAAAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CCA 90 bp CAGGACAGGGGACTTCAGCTTCACCGTCTTAGAATCTGCTCCACTTaGCGGCGTTTTGGAGTGGCCAGCGGTGGAACAGTTCGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: QDRGLQLHRLRICST*RRFGVASGGTVRFL
Trigger: CAGGAAACGAACTGTTCCACCGCTGGCCACTCCAAAACGCCGCCAAGTGGAGCAGATTCTAAGACGGTGAAGCTGAAGTCCCCTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CCA 90 bp AAAGATGGATGTCAATATCTTTGCACTCACAGGGCCCTCCCTGCCTaGACTGCTGACCACCACGTGCGGTACTCTCCTGCTGAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: KDGCQYLCTHRALPA*TADHHVRYSPAEGE
Trigger: CTCTCCCTCAGCAGGAGAGTACCGCACGTGGTGGTCAGCAGTCCAGGCAGGGAGGGCCCTGTGAGTGCAAAGATATTGACATCCATCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589254.1
CDS-3UTR CAA 90 bp TCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGTAACGGAGGGCTGAGTTaGGTTGGGCAGGTGCTACGC +
Preference number: 5 (lower is better)
Translates to: SLNKSPLGALFVCWEHTGNGGLS*VGQVLR
Trigger: GCGTAGCACCTGCCCAACCAAACTCAGCCCTCCGTT...ACCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CAA 90 bp CCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCACTGGATGGTGGCATaGAGAAAGCAGGTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: PGKDVQQVCGHLCSHTHCHWMVA*RKQVLP
Trigger: TGGCAACACCTGCTTTCTCAATGCCACCATCCAGTG...ACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp ACAGCAGCCTGGAAAGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCGGTAGTAGCCTGCGTTaGACGATCCAACTTGGCACA +
Preference number: 5 (lower is better)
Translates to: TAAWKADVFAGIEGSSDPGSSLR*TIQLGT
Trigger: TGTGCCAAGTTGGATCGTCAAACGCAGGCTACTACC...GGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCTTTCCAGGCTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp GCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCATACCCTCCAAAAATTaGATGGACCAAGGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: AHTESSLRSRPTAPGKGRIPSKN*MDQGSS
Trigger: GCTACTACCTTGGTCCATCAAATTTTTGGAGGGTAT...GCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CCAGCTATGCACCGGGAGACCACCTGGGGGACATGTGGCCACCATCCCCCACTCATACCCTCCAAAAATTaGATGGACCAAGGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: PAMHRETTWGTCGHHPPLIPSKN*MDQGSS
Trigger: GCTACTACCTTGGTCCATCAAATTTTTGGAGGGTAT...GAGTGGGGGATGGTGGCCACATGTCCCCCAGGTGGTCTCCCGGTGCATAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp AGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCCATCGTCCCAGAGTCTaGTCGCTTTCCAGTCAGTGG +
Preference number: 5 (lower is better)
Translates to: SQSTEARPSSLNIQRLVRHRPRV*SLSSQW
Trigger: CCACTGACTGGAAAGCGACAAGACTCTGGGACGATG...GCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp ATGCGGCTGGCAAGAAGTCACCCTTCTGCAAGTGACTGGGACACATGCCAGATAACCCCGAGGGCAGCTTaGGAGGAATGCAGCCGTTCT +
Preference number: 5 (lower is better)
Translates to: MRLARSHPSASDWDTCQITPRAA*EECSRS
Trigger: AGAACGGCTGCATTCCTCCAAAGCTGCCCTCGGGGT...TATCTGGCATGTGTCCCAGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CAA 90 bp GGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAAGAAAGGGCCAGTTTTTaGGCTGGTGGAGGAGACATG +
Preference number: 5 (lower is better)
Translates to: GHLCSHTHCRFSCRAGREERASF*AGGGDM
Trigger: CATGTCTCCTCCACCAGCCAAAAAACTGGCCCTTTC...TTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp ACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGAGAGGGAGGGTGCTGGCCTTCTaGGCAGAAAGGGCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: TEARPSSLNIQRLVRRRGRVLAF*AERASF
Trigger: AAAACTGGCCCTTTCTGCCAAGAAGGCCAGCACCCT...CCCTCTCCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CAGATATACACACAACCCACATCCCACACACACCCCACACATGCCCTTCTCCAAGACGTCCCTGGGGGCTaGGGGGTACTGGACAGCAAT +
Preference number: 5 (lower is better)
Translates to: QIYTQPTSHTHPTHALLQDVPGG*GVLDSN
Trigger: ATTGCTGTCCAGTACCCCCAAGCCCCCAGGGACGTC...TTGGAGAAGGGCATGTGTGGGGTGTGTGTGGGATGTGGGTTGTGTGTATATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CAA 90 bp ACAGCAGCCTGGAAAGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCGCACTCCTTGGGCATTaGAGATGCCCATCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: TAAWKADVFAGIEGSSDPALLGH*RCPSSS
Trigger: AGAAGAGGATGGGCATCTCAAATGCCCAAGGAGTGC...GGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCTTTCCAGGCTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp GTCCAACACCACGTTGTCCATCTCCACCTGCGACGACTCCGGGAGGAAATGACGGCACTCCTTGGGCATTaGAGATGCCCATCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: VQHHVVHLHLRRLREEMTALLGH*RCPSSS
Trigger: AGAAGAGGATGGGCATCTCAAATGCCCAAGGAGTGC...CGTCATTTCCTCCCGGAGTCGTCGCAGGTGGAGATGGACAACGTGGTGTTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CGCAGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGTTATCAGATGAGTATTaGAGCAGTTCCTGGACCACA +
Preference number: 5 (lower is better)
Translates to: RSRAHTESSLRSRPTAPGLSDEY*SSSWTT
Trigger: TGTGGTCCAGGAACTGCTCAAATACTCATCTGATAA...CCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp AGGGCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTACACTGTCGTTTCTCTaGCAGGGCTGGTCGGGAATG +
Preference number: 5 (lower is better)
Translates to: RAPPTPNSLCSPGQLRATTLSFL*QGWSGM
Trigger: CATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGT...AGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp CAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGGGAGGGAAAGGAAACATATaGCTAATGGAAGCCACAGGA +
Preference number: 5 (lower is better)
Translates to: QPREARDGLPRATSYAPGGKGNI*LMEATG
Trigger: TCCTGTGGCTTCCATTAGCAATATGTTTCCTTTCCC...TCCCGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS TCA 90 bp ACCACGGTCTCAGTCCGGGCCTGTCTGCTGTCTTCAATAGCATCCTaGCTGACCGCCGACATCTTGCCATCCCAGGTCAGAACTTTTCTC +
Preference number: 5 (lower is better)
Translates to: TTVSVRACLLSSIAS*LTADILPSQVRTFL
Trigger: GAGAAAAGTTCTGACCTGGGATGGCAAGATGTCGGCGGTCAGTCAGGATGCTATTGAAGACAGCAGACAGGCCCGGACTGAGACCGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588130.5
ENST00000589225.5
CDS GCA 90 bp AGGAGGCAAGAAGCTTCCCCAGTTCTCCATCATCAGCCGAGTCCTTaGGGCCGGGTTTCAGGGCCTCCTTCAACTTATCCACTATTGGCA +
Preference number: 5 (lower is better)
Translates to: RRQEASPVLHHQPSP*GRVSGPPSTYPLLA
Trigger: TGCCAATAGTGGATAAGTTGAAGGAGGCCCTGAAACCCGGCCGCAAGGACTCGGCTGATGATGGAGAACTGGGGAAGCTTCTTGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000587783.5
ENST00000588086.5
ENST00000588365.1
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000591942.6
ENST00000592275.5
ENST00000592907.5
CDS CCA 90 bp TGCTCACTGCCCTGTCTCCTGGCCGGTGGGTCATCTCCACTCTTGTaGCGACTAGCTCCCTCTGTTTTGGGGTTGAGCAACACATATTTG +
Preference number: 5 (lower is better)
Translates to: CSLPCLLAGGSSPLL*RLAPSVLGLSNTYL
Trigger: CAAATATGTGTTGCTCAACCCCAAAACAGAGGGAGCTAGTCGCCACAAGAGTGGAGATGACCCACCGGCCAGGAGACAGGGCAGTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
CDS CCA 90 bp CCAGGGTGGAGCCATTCCTGGATATGGGCACACCAATCTCTTCAGTaGTGTGCGGCTTCTTCATCGTCCCAGAGTCTTGTCGCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: PGWSHSWIWAHQSLQ*CAASSSSQSLVAFQ
Trigger: CTGGAAAGCGACAAGACTCTGGGACGATGAAGAAGCCGCACACCACTGAAGAGATTGGTGTGCCCATATCCAGGAATGGCTCCACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS-3UTR CAA 90 bp CTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCTGGGTCATCTCCACTCTaGTGGCGACTAGCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: LSFLLQGWSGMSPKRFRSGSSPL*WRLAPS
Trigger: AGAGGGAGCTAGTCGCCACAAGAGTGGAGATGACCC...AGATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CTGGGACACATGCCAGATATACACACAACCCACATCCCACACACACCCCACACAATGAAGGAGACGGGCTaGATGGCGTTGCCGCTGTTG +
Preference number: 5 (lower is better)
Translates to: LGHMPDIHTTHIPHTPHTMKETG*MALPLL
Trigger: CAACAGCGGCAACGCCATCAAGCCCGTCTCCTTCAT...TGTGTGGGGTGTGTGTGGGATGTGGGTTGTGTGTATATCTGGCATGTGTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CAA 90 bp GGCATCTCGATGCGGCTGGCAAGAAGTCACCCTTCTGCAAGTGACTGGGACACAGGTAGTAGCCTGCGTTaGACGATCCAACTTGGCACA +
Preference number: 5 (lower is better)
Translates to: GISMRLARSHPSASDWDTGSSLR*TIQLGT
Trigger: TGTGCCAAGTTGGATCGTCAAACGCAGGCTACTACC...TGTGTCCCAGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCATCGAGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CAA 90 bp AGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATAGCCTCTGCTCATCGTCCCAGAGTCTaGTCGCTTTCCAGTCAGTGG +
Preference number: 5 (lower is better)
Translates to: SRCIRRYRGLLRPQIASAHRPRV*SLSSQW
Trigger: CCACTGACTGGAAAGCGACAAGACTCTGGGACGATG...AGCAGAGGCTATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGTCAAGGGGACAACAGCATCTaGGGGCTTGGCACTCCTTGG +
Preference number: 5 (lower is better)
Translates to: LNKSPLGALFVCWEHTGQGDNSI*GLGTPW
Trigger: CCAAGGAGTGCCAAGCCCCAAGATGCTGTTGTCCCC...TTGACCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CAA 90 bp CGTCAGCCCCGAGAAGCAAGGGATGGCTTGCCCAGAGCCACCAGCTATGCACCGTTATCAGATGAGTATTaGAGCAGTTCCTGGACCACA +
Preference number: 5 (lower is better)
Translates to: RQPREARDGLPRATSYAPLSDEY*SSSWTT
Trigger: TGTGGTCCAGGAACTGCTCAAATACTCATCTGATAA...CGGTGCATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTCTCGGGGCTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCTCCAGGAGGCTGTTATCAGATGAGTATTaGAGCAGTTCCTGGACCACA +
Preference number: 5 (lower is better)
Translates to: LRSRPTAPGKGRLVSRRLLSDEY*SSSWTT
Trigger: TGTGGTCCAGGAACTGCTCAAATACTCATCTGATAA...CAGCCTCCTGGAGACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CAA 90 bp AAAGCCCCAAGCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCTTGATCATCTGACCGCCGACATCTaGCCATCCCAGGTCAGAACT +
Preference number: 5 (lower is better)
Translates to: KAPSSGGFHSRESAPLDHLTADI*PSQVRT
Trigger: AGTTCTGACCTGGGATGGCAAGATGTCGGCGGTCAG...ATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGCTTGGGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588130.5
ENST00000589225.5
CDS-3UTR CAA 90 bp CACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATGAAGCAAGGGATGGCTaGCCCAGAGCCACCAGCTAT +
Preference number: 5 (lower is better)
Translates to: HCRFSCRAGRECHQRGSDEARDG*PRATSY
Trigger: ATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTC...ATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp CACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGAGAGGAAGACCTGCGGGTTATaGCAGCTGCAAGGGAAGCTA +
Preference number: 5 (lower is better)
Translates to: HGSQALIFEHSETGPQERKTCGL*QLQGKL
Trigger: TAGCTTCCCTTGCAGCTGCAATAACCCGCAGGTCTT...CCTCTCCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp CAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGAAGACCTGCGGGTTATaGCAGCTGCAAGGGAAGCTA +
Preference number: 5 (lower is better)
Translates to: QSTEARPSSLNIQRLVRRKTCGL*QLQGKL
Trigger: TAGCTTCCCTTGCAGCTGCAATAACCCGCAGGTCTT...CCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp AGCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGGAAAGGAAACATATaGCTAATGGAAGCCACAGGA +
Preference number: 5 (lower is better)
Translates to: SRAHTESSLRSRPTAPGKGKGNI*LMEATG
Trigger: TCCTGTGGCTTCCATTAGCAATATGTTTCCTTTCCC...CTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS TCA 90 bp TTTCCCAGGAAGCAAGGGCAATCCCCTATTTGGGCTCCAACAGTTTaGGTACCCAGAGGCAAATTCTGCCACGTCTACCCAAGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: FPRKQGQSPIWAPTV*VPRGKFCHVYPRAA
Trigger: GGCTGCCCTTGGGTAGACGTGGCAGAATTTGCCTCTGGGTACTCAAACTGTTGGAGCCCAAATAGGGGATTGCCCTTGCTTCCTGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CAA 90 bp CCTGGCAAAGATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCTAGCTCCCTCTGTTTaGGGGTTGAGCAACACATAT +
Preference number: 5 (lower is better)
Translates to: PGKDVQQVCGHLCSHTHCLAPSV*GLSNTY
Trigger: ATATGTGTTGCTCAACCCCAAAACAGAGGGAGCTAG...ACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATCTTTGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp ACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGGACGCCTTGTCATACCCTCCAAAAATTaGATGGACCAAGGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: TESSLRSRPTAPGKGRLVIPSKN*MDQGSS
Trigger: GCTACTACCTTGGTCCATCAAATTTTTGGAGGGTAT...GACAAGGCGTCCCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp ATGCGGCTGGCAAGAAGTCACCCTTCTGCAAGTGACTGGGACACATGCCAGATATGGATGGTGAAGCGCTaGCTGGCTGGAACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: MRLARSHPSASDWDTCQIWMVKR*LAGTFF
Trigger: GAAGAAGGTTCCAGCCAGCAAGCGCTTCACCATCCA...TATCTGGCATGTGTCCCAGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CAA 90 bp AGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGAACCACCTTGACGTaGCTGGAATGGACCAAGGAA +
Preference number: 5 (lower is better)
Translates to: SQSTEARPSSLNIQRLVRRTTLT*LEWTKE
Trigger: TTCCTTGGTCCATTCCAGCAACGTCAAGGTGGTTCT...GCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp ATGCGGCTGGCAAGAAGTCACCCTTCTGCAAGTGACTGGGACACATGCCAGATACATCGTCCCAGAGTCTaGTCGCTTTCCAGTCAGTGG +
Preference number: 5 (lower is better)
Translates to: MRLARSHPSASDWDTCQIHRPRV*SLSSQW
Trigger: CCACTGACTGGAAAGCGACAAGACTCTGGGACGATG...TATCTGGCATGTGTCCCAGTCACTTGCAGAAGGGTGACTTCTTGCCAGCCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CAA 90 bp GAAGGCATGTGCTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGGGACAACAGCATCTaGGGGCTTGGCACTCCTTGG +
Preference number: 5 (lower is better)
Translates to: EGMCFPFQISYKARARKPGDNSI*GLGTPW
Trigger: CCAAGGAGTGCCAAGCCCCAAGATGCTGTTGTCCCC...TGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCACATGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTGAAGCAAGGGATGGCTaGCCCAGAGCCACCAGCTAT +
Preference number: 5 (lower is better)
Translates to: LSLPDKLQSQSTEARPSSEARDG*PRATSY
Trigger: ATAGCTGGTGGCTCTGGGCAAGCCATCCCTTGCTTC...AGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp GCTCCTCCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACTGCTCTCCAGGACAGTaGAGAGCTACTCACAAGGAA +
Preference number: 5 (lower is better)
Translates to: APPTPNSLCSPGQLRATHCSPGQ*RATHKE
Trigger: TTCCTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCA...GTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGGAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp CACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATAAGTCCAACACCACGTaGTCCATCTCCACCTGCGAC +
Preference number: 5 (lower is better)
Translates to: HCRFSCRAGRECHQRGSDKSNTT*SISTCD
Trigger: GTCGCAGGTGGAGATGGACAACGTGGTGTTGGACTT...ATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp GTTCGTGTGCTGGGAACACACAGGTCAATGAAGAGCAGCCAGAAAGCCCCAAGCGCCAGGCCCTCATCTTaGAACATTCAGAGACTGGTC +
Preference number: 5 (lower is better)
Translates to: VRVLGTHRSMKSSQKAPSARPSS*NIQRLV
Trigger: GACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGC...GCTTGGGGCTTTCTGGCTGCTCTTCATTGACCTGTGTGTTCCCAGCACACGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589225.5
ENST00000591052.5
CDS-3UTR CAA 90 bp CAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGTGAATCAGCACCGCTaGATCATCGTGACAGGCTCC +
Preference number: 5 (lower is better)
Translates to: QSLNKSPLGALFVCWEHTVNQHR*IIVTGS
Trigger: GGAGCCTGTCACGATGATCAAGCGGTGCTGATTCAC...TGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587010.5
CDS GCA 90 bp GTGGAGCCATTCCTGGATATGGGCACACCAATCTCTTCAGTGGTGTaGGGCTTCTTCATCGTCCCAGAGTCTTGTCGCTTTCCAGTCAGT +
Preference number: 5 (lower is better)
Translates to: VEPFLDMGTPISSVV*GFFIVPESCRFPVS
Trigger: ACTGACTGGAAAGCGACAAGACTCTGGGACGATGAAGAAGCCGCACACCACTGAAGAGATTGGTGTGCCCATATCCAGGAATGGCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS GCA 90 bp GGGACAACAGCATCTTGGGGCTTGGCACTCCTTGGGCATTTGAGATaGCCATCCTCTTCTACTGCCCGCTGTGTCTCCTGCTTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: GTTASWGLALLGHLR*PSSSTARCVSCFLF
Trigger: AAAAAGAAAGCAGGAGACACAGCGGGCAGTAGAAGAGGATGGGCATCTCAAATGCCCAAGGAGTGCCAAGCCCCAAGATGCTGTTGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS CCA 90 bp ACATCTGTACCCTGTCTCCTGGCCGGTGGGTCATCTCCACTCTTGTaGCGACTAGCTCCCTCTGTTTTGGGGTTGAGCAACACATATTTG +
Preference number: 5 (lower is better)
Translates to: TSVPCLLAGGSSPLL*RLAPSVLGLSNTYL
Trigger: CAAATATGTGTTGCTCAACCCCAAAACAGAGGGAGCTAGTCGCCACAAGAGTGGAGATGACCCACCGGCCAGGAGACAGGGTACAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592907.5
CDS-3UTR CAA 90 bp AAAATAAATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGAACGGAGGGCTGAGTTaGGTTGGGCAGGTGCTACGC +
Preference number: 5 (lower is better)
Translates to: KINGEFYPKASTSVKTCGNGGLS*VGQVLR
Trigger: GCGTAGCACCTGCCCAACCAAACTCAGCCCTCCGTT...CCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATTTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp TCTAGAGAAGCCTCAAAGCCTCTGTGTTGGGCGGTCTGTGGACACTGGTACCGGCCCTCTGTTTTGGGGTaGAGCAACACATATTTGCTC +
Preference number: 5 (lower is better)
Translates to: SREASKPLCWAVCGHWYRPSVLG*SNTYLL
Trigger: GAGCAAATATGTGTTGCTCAACCCCAAAACAGAGGG...CCGGTACCAGTGTCCACAGACCGCCCAACACAGAGGCTTTGAGGCTTCTCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGGTCCGCAGGAGAGGCCCTCTGTTTTGGGGTaGAGCAACACATATTTGCTC +
Preference number: 5 (lower is better)
Translates to: HGSQALIFEHSETGPQERPSVLG*SNTYLL
Trigger: GAGCAAATATGTGTTGCTCAACCCCAAAACAGAGGG...CCTCTCCTGCGGACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp GCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATCTAGCTCCCTCTGTTTaGGGGTTGAGCAACACATAT +
Preference number: 5 (lower is better)
Translates to: ATSAHTHTVVSLAGLVGNLAPSV*GLSNTY
Trigger: ATATGTGTTGCTCAACCCCAAAACAGAGGGAGCTAG...ATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CTGGGACACATGCCAGATATACACACAACCCACATCCCACACACACCCCACACAGGTAGTAGCCTGCGTTaGACGATCCAACTTGGCACA +
Preference number: 5 (lower is better)
Translates to: LGHMPDIHTTHIPHTPHTGSSLR*TIQLGT
Trigger: TGTGCCAAGTTGGATCGTCAAACGCAGGCTACTACC...TGTGTGGGGTGTGTGTGGGATGTGGGTTGTGTGTATATCTGGCATGTGTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CAA 90 bp AGCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCTTGATCATCCTGCCCGTGAAAGGGTTAAGACGTaGGATGTTCTGTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: SSGGFHSRESAPLDHPARERVKT*DVLWMV
Trigger: CACCATCCACAGAACATCCAACGTCTTAACCCTTTC...ACGGGCAGGATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CAA 90 bp CTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGTGGTTCAGAACCACCTaGACGTTGCTGGAATGGACC +
Preference number: 5 (lower is better)
Translates to: LTHTLSFLLQGWSGMSPKWFRTT*TLLEWT
Trigger: GGTCCATTCCAGCAACGTCAAGGTGGTTCTGAACCA...CTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCTGCACTCCTTGGGCATTaGAGATGCCCATCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LSFLLQGWSGMSPKRFRSALLGH*RCPSSS
Trigger: AGAAGAGGATGGGCATCTCAAATGCCCAAGGAGTGC...AGATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp GCAGAGCCCACACAGAGAGCTCCCTCAGATCCAGACCGACAGCTCCCGGGAAGGCCACTATTTGCATATTaGGGAAAGGAAACATATTGC +
Preference number: 5 (lower is better)
Translates to: AEPTQRAPSDPDRQLPGRPLFAY*GKETYC
Trigger: GCAATATGTTTCCTTTCCCAAATATGCAAATAGTGG...CCTTCCCGGGAGCTGTCGGTCTGGATCTGAGGGAGCTCTCTGTGTGGGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp CCGACCCCAAATAGCCTCTGCTCTCCAGGACAGTTGAGAGCTACTCACAAGGAAGCCAGGCCCTCATCTTaGAACATTCAGAGACTGGTC +
Preference number: 5 (lower is better)
Translates to: PTPNSLCSPGQLRATHKEARPSS*NIQRLV
Trigger: GACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGC...TTCCTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCAGAGGCTATTTGGGGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp AAAGCCCCAAGCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCTTGATCATGTGAATCAGCACCGCTaGATCATCTCCTTCCACAGG +
Preference number: 5 (lower is better)
Translates to: KAPSSGGFHSRESAPLDHVNQHR*IISFHR
Trigger: CCTGTGGAAGGAGATGATCAAGCGGTGCTGATTCAC...ATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGCTTGGGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588130.5
CDS-3UTR CAA 90 bp GAGAAACGAGACCCGAATCTTCCCACTGCCACCCTCGGGTATGAGTCCAACCTATCAACTTATCCACTATaGGCATGGTGCATCACTGGG +
Preference number: 5 (lower is better)
Translates to: EKRDPNLPTATLGYESNLSTYPL*AWCITG
Trigger: CCCAGTGATGCACCATGCCAATAGTGGATAAGTTGA...TAGGTTGGACTCATACCCGAGGGTGGCAGTGGGAAGATTCGGGTCTCGTTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS-3UTR CAA 90 bp GATGTCCAGCAGGTGTGCGGCCACCTCTGCTCACACACACACTGTCGTTTCTCTTTGAGCAACACATATTaGCTCTTTAAGGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: DVQQVCGHLCSHTHCRFSLSNTY*LFKASS
Trigger: GCTGGAGGCCTTAAAGAGCAAATATGTGTTGCTCAA...AGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGCCGCACACCTGCTGGACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CAGCCTGGAAAGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATGAAAGGGTTAAGACGTaGGATGTTCTGTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: QPGKQMYSQVSRAPPTPNERVKT*DVLWMV
Trigger: CACCATCCACAGAACATCCAACGTCTTAACCCTTTC...ATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCTTTCCAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp ACTGTTCGTGTGCTGGGAACACACAGGTCAATGAAGAGCAGCCAGAAAGCCCCATGCTCTCCAGGACAGTaGAGAGCTACTCACAAGGAA +
Preference number: 5 (lower is better)
Translates to: TVRVLGTHRSMKSSQKAPCSPGQ*RATHKE
Trigger: TTCCTTGTGAGTAGCTCTCAACTGTCCTGGAGAGCA...TGGGGCTTTCTGGCTGCTCTTCATTGACCTGTGTGTTCCCAGCACACGAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CAA 90 bp TTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTTTGAACATTCAGAGACTGAAGTCCAACACCACGTaGTCCATCTCCACCTGCGAC +
Preference number: 5 (lower is better)
Translates to: LQSQSTEARPSSLNIQRLKSNTT*SISTCD
Trigger: GTCGCAGGTGGAGATGGACAACGTGGTGTTGGACTT...CAGTCTCTGAATGTTCAAAGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS GCA 90 bp GATCATTCAATTTTTATTTTGGCACAGCCATTCAGGCAGGCTTTCTaGATGGCGTCGATGGTGTACCGCAGGAACTCATGCGCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: DHSIFILAQPFRQAF*MASMVYRRNSCASS
Trigger: GGAGGACGCGCATGAGTTCCTGCGGTACACCATCGACGCCATGCAGAAAGCCTGCCTGAATGGCTGTGCCAAAATAAAAATTGAATGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586066.3
ENST00000589424.5
CDS CCA 90 bp TTGGCAAAGCGCTTGAGGGAAAGGGTTAAGACGTTGGATGTTCTGTaGATGGTGAAGCGCTTGCTGGCTGGAACCTTCTTCTTGCATCAG +
Preference number: 5 (lower is better)
Translates to: LAKRLRERVKTLDVL*MVKRLLAGTFFLHQ
Trigger: CTGATGCAAGAAGAAGGTTCCAGCCAGCAAGCGCTTCACCATCCACAGAACATCCAACGTCTTAACCCTTTCCCTCAAGCGCTTTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588467.5
CDS-3UTR CAA 90 bp AAGTATTTCTACGATCCTAAGCTGAGGCAATACAAGGAAGTCCTAAGCATTTCCTCATCAGCCGAGTCCTaGCGGCCGGGTTTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: KYFYDPKLRQYKEVLSISSSAES*RPGFRA
Trigger: GGCCCTGAAACCCGGCCGCAAGGACTCGGCTGATGA...GGAAATGCTTAGGACTTCCTTGTATTGCCTCAGCTTAGGATCGTAGAAATACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CAA 90 bp AGAAGAAAAGGAACATACCCTGCCCGTGAAGGCATGTGCTTTCCCTTCCAGATATGGATGGTGAAGCGCTaGCTGGCTGGAACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RRKGTYPAREGMCFPFQIWMVKR*LAGTFF
Trigger: GAAGAAGGTTCCAGCCAGCAAGCGCTTCACCATCCA...TATCTGGAAGGGAAAGCACATGCCTTCACGGGCAGGGTATGTTCCTTTTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR CAA 90 bp CAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGTTCAGAACCACCTaGACGTTGCTGGAATGGACC +
Preference number: 5 (lower is better)
Translates to: QVYIQSLNKSPLGALFVCWFRTT*TLLEWT
Trigger: GGTCCATTCCAGCAACGTCAAGGTGGTTCTGAACCA...GCACACGAACAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAATATACACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CAA 90 bp GAGAAACGAGACCCGAATCTTCCCACTGCCACCCTCGGGTATGAGTCCAACCTAGGGAAAGGAAACATATaGCTAATGGAAGCCACAGGA +
Preference number: 5 (lower is better)
Translates to: EKRDPNLPTATLGYESNLGKGNI*LMEATG
Trigger: TCCTGTGGCTTCCATTAGCAATATGTTTCCTTTCCC...TAGGTTGGACTCATACCCGAGGGTGGCAGTGGGAAGATTCGGGTCTCGTTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS TCA 90 bp TTCGCAGATAGAACAGCACGTAGGCCTGCTGGTTCAGAACCACCTTaGCGTTGCTGGAATGGACCAAGGAATCATTCATCTGGTACCACT +
Preference number: 5 (lower is better)
Translates to: FADRTARRPAGSEPP*RCWNGPRNHSSGTT
Trigger: AGTGGTACCAGATGAATGATTCCTTGGTCCATTCCAGCAACGTCAAGGTGGTTCTGAACCAGCAGGCCTACGTGCTGTTCTATCTGCGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586066.3
ENST00000588086.5
ENST00000588467.5
ENST00000589225.5
ENST00000590312.1
CDS TCA 90 bp CTTGCCATCCCAGGTCAGAACTTTTCTCCCGTAAGCTTTATCAGATaGGTATTTGAGCAGTTCCTGGACCACATCAGACTCCCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LAIPGQNFSPVSFIR*VFEQFLDHIRLPLS
Trigger: GGAGAGCGGGAGTCTGATGTGGTCCAGGAACTGCTCAAATACTCATCTGATAAAGCTTACGGGAGAAAAGTTCTGACCTGGGATGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS CCA 90 bp TTGGCAAAGCGCTTGAGGGAAAGGGTTAAGACGTTGGATGTTCTGTaGATGGTGAAGCGCTTGCTGGCTGGAACCTTCTTCTTGCATCTA +
Preference number: 5 (lower is better)
Translates to: LAKRLRERVKTLDVL*MVKRLLAGTFFLHL
Trigger: TAGATGCAAGAAGAAGGTTCCAGCCAGCAAGCGCTTCACCATCCACAGAACATCCAACGTCTTAACCCTTTCCCTCAAGCGCTTTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590312.1
CDS-3UTR CAA 90 bp GAAGGCATGTGCTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAAGAACCACCTTGACGTaGCTGGAATGGACCAAGGAA +
Preference number: 5 (lower is better)
Translates to: EGMCFPFQISYKARARKPRTTLT*LEWTKE
Trigger: TTCCTTGGTCCATTCCAGCAACGTCAAGGTGGTTCT...TGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCACATGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATGTCACCAAAGAGGTTCCGATCTGAGGAAATAATCCCATaGCCGATGTTCTTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LSFLLQGWSGMSPKRFRSEEIIP*PMFFLE
Trigger: CTCCAAGAAGAACATCGGCAATGGGATTATTTCCTC...AGATCGGAACCTCTTTGGTGACATTCCCGACCAGCCCTGCAAGAGAAACGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp GTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGTCAATGAAGAGCAGCCAGTTATCAGATGAGTATTaGAGCAGTTCCTGGACCACA +
Preference number: 5 (lower is better)
Translates to: VRGTVRVLGTHRSMKSSQLSDEY*SSSWTT
Trigger: TGTGGTCCAGGAACTGCTCAAATACTCATCTGATAA...CTGGCTGCTCTTCATTGACCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588130.5
ENST00000589225.5
CDS TCA 90 bp CCCAGGTCAGAACTTTTCTCCCGTAAGCTTTATCAGATGAGTATTTaGGCAGTTCCTGGACCACATCAGACTCCCGCTCTCCATTCCAAG +
Preference number: 5 (lower is better)
Translates to: PRSELFSRKLYQMSI*AVPGPHQTPALHSK
Trigger: CTTGGAATGGAGAGCGGGAGTCTGATGTGGTCCAGGAACTGCTCAAATACTCATCTGATAAAGCTTACGGGAGAAAAGTTCTGACCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS CCA 90 bp CATATTTGCTCTTTAAGGCCTCCAGCTGGTAGGAGAAGCTCTTGCTaGCTGGCTCGAACTCGATTTTCTGTAAAAGGACCTTCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: HICSLRPPAGRRSSC*LARTRFSVKGPSWQ
Trigger: CTGCCAAGAAGGTCCTTTTACAGAAAATCGAGTTCGAGCCAGCCAGCAAGAGCTTCTCCTACCAGCTGGAGGCCTTAAAGAGCAAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000587783.5
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000592275.5
ENST00000592907.5
CDS CCA 90 bp TTGGCAAAGCGCTTGAGGGAAAGGGTTAAGACGTTGGATGTTCTGTaGATGGTGAAGCGCTTGCTGGCTGGAACCTTCTTCTTGCATTTA +
Preference number: 5 (lower is better)
Translates to: LAKRLRERVKTLDVL*MVKRLLAGTFFLHL
Trigger: TAAATGCAAGAAGAAGGTTCCAGCCAGCAAGCGCTTCACCATCCACAGAACATCCAACGTCTTAACCCTTTCCCTCAAGCGCTTTGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586066.3
ENST00000588086.5
ENST00000589225.5
ENST00000589254.1
CDS-3UTR CAA 90 bp AATGGAGAATTCTACCCCAAAGCCTCCACCTCAGTGAAGACCTGCGGGTTATTGTCAACTTATCCACTATaGGCATGGTGCATCACTGGG +
Preference number: 5 (lower is better)
Translates to: NGEFYPKASTSVKTCGLLSTYPL*AWCITG
Trigger: CCCAGTGATGCACCATGCCAATAGTGGATAAGTTGA...CAATAACCCGCAGGTCTTCACTGAGGTGGAGGCTTTGGGGTAGAATTCTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp TCTCGTGCTCACCACTGCCCAAGAGTTAACGAATGTATGTACCCCAGGAAAAGGCTAGCTCCCTCTGTTTaGGGGTTGAGCAACACATAT +
Preference number: 5 (lower is better)
Translates to: SRAHHCPRVNECMYPRKRLAPSV*GLSNTY
Trigger: ATATGTGTTGCTCAACCCCAAAACAGAGGGAGCTAG...CCTTTTCCTGGGGTACATACATTCGTTAACTCTTGGGCAGTGGTGAGCACGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR CAA 90 bp CTGAACAAATCTCCGTTAGGGGCACTGTTCGTGTGCTGGGAACACACAGGTCAAGAGGAAATAATCCCATaGCCGATGTTCTTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LNKSPLGALFVCWEHTGQEEIIP*PMFFLE
Trigger: CTCCAAGAAGAACATCGGCAATGGGATTATTTCCTC...TTGACCTGTGTGTTCCCAGCACACGAACAGTGCCCCTAACGGAGATTTGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CAA 90 bp ACTCGTTTACAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGAAGACCTGCGGGTTATaGCAGCTGCAAGGGAAGCTA +
Preference number: 5 (lower is better)
Translates to: TRLQVYIQSLNKSPLGALKTCGL*QLQGKL
Trigger: TAGCTTCCCTTGCAGCTGCAATAACCCGCAGGTCTT...CAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAATATACACCTGTAAACGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CAA 90 bp GCCACCTCTGCTCACACACACACTGTCGTTTCTCTTGCAGGGCTGGTCGGGAATCCACTATTTGCATATTaGGGAAAGGAAACATATTGC +
Preference number: 5 (lower is better)
Translates to: ATSAHTHTVVSLAGLVGNPLFAY*GKETYC
Trigger: GCAATATGTTTCCTTTCCCAAATATGCAAATAGTGG...ATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGTGTGTGTGAGCAGAGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS GCA 90 bp ACACATATTTGCTCTTTAAGGCCTCCAGCTGGTAGGAGAAGCTCTTaGTGGCTGGCTCGAACTCGATTTTCTGTAAAAGGACCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: THICSLRPPAGRRSS*WLARTRFSVKGPSW
Trigger: CCAAGAAGGTCCTTTTACAGAAAATCGAGTTCGAGCCAGCCAGCAAGAGCTTCTCCTACCAGCTGGAGGCCTTAAAGAGCAAATATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000587783.5
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000592275.5
ENST00000592907.5
CDS-3UTR CAA 90 bp TCTCGTGCTCACCACTGCCCAAGAGTTAACGAATGTATGTACCCCAGGAAAAGGTTGAGCAACACATATTaGCTCTTTAAGGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SRAHHCPRVNECMYPRKRLSNTY*LFKASS
Trigger: GCTGGAGGCCTTAAAGAGCAAATATGTGTTGCTCAA...CCTTTTCCTGGGGTACATACATTCGTTAACTCTTGGGCAGTGGTGAGCACGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS-3UTR CAA 90 bp TATACATGCTACTCGTTTACAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTATGGCGTTGCCGCTGTaGGCGAAGGCCTGGACAATG +
Preference number: 5 (lower is better)
Translates to: YTCYSFTGVYSVAEQISVMALPL*AKAWTM
Trigger: CATTGTCCAGGCCTTCGCCAACAGCGGCAACGCCAT...AACGGAGATTTGTTCAGCGACTGAATATACACCTGTAAACGAGTAGCATGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CAA 90 bp GGATTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATAGGGGACAACAGCATCTaGGGGCTTGGCACTCCTTGG +
Preference number: 5 (lower is better)
Translates to: GFPVFIKLQVGRHSLSNIGDNSI*GLGTPW
Trigger: CCAAGGAGTGCCAAGCCCCAAGATGCTGTTGTCCCC...TATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp AGCAGATGTATTCGCAGGTATCGAGGGCTCCTCCGACCCCAAATAGCCTCTGCTCCACTATTTGCATATTaGGGAAAGGAAACATATTGC +
Preference number: 5 (lower is better)
Translates to: SRCIRRYRGLLRPQIASAPLFAY*GKETYC
Trigger: GCAATATGTTTCCTTTCCCAAATATGCAAATAGTGG...AGCAGAGGCTATTTGGGGTCGGAGGAGCCCTCGATACCTGCGAATACATCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp TCGTTTACAGGTGTATATTCAGTCGCTGAACAAATCTCCGTTAGGGGCACTGTTGCCAGGCCCTCATCTTaGAACATTCAGAGACTGGTC +
Preference number: 5 (lower is better)
Translates to: SFTGVYSVAEQISVRGTVARPSS*NIQRLV
Trigger: GACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGC...AACAGTGCCCCTAACGGAGATTTGTTCAGCGACTGAATATACACCTGTAAACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589225.5
ENST00000591052.5
CDS-3UTR CAA 90 bp TGCTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATGTTCAGTGGGATGTATaGACTGGATCAGTTGATTCT +
Preference number: 5 (lower is better)
Translates to: CFPFQISYKARARKPGPHVQWDV*TGSVDS
Trigger: AGAATCAACTGATCCAGTCAATACATCCCACTGAAC...ATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587379.1
CDS-3UTR CAA 90 bp AGCAAACAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGATTCAGCCCATGCCCGTaGGCAGTGGCTGTAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SKQSHYLHIWERKHIANGFSPCP*AVAVAR
Trigger: CCTGGCTACAGCCACTGCCAACGGGCATGGGCTGAA...TCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTGTTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS TCA 90 bp GCGTTTGACGATCCAACCATGGCACTTCCCAGACTCCGGGAGCTCTaGAATACTTGGGGGACCAATACAGGATCATTCAATTTTTATTTT +
Preference number: 5 (lower is better)
Translates to: AFDDPTMALPRLREL*NTWGTNTGSFNFYF
Trigger: AAAATAAAAATTGAATGATCCTGTATTGGTCCCCCAAGTATTTCAGAGCTCCCGGAGTCTGGGAAGTGCCATGGTTGGATCGTCAAACGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000586066.3
CDS-3UTR CAA 90 bp TTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATAGAAGAGGAGACATGGTGCTaGCAGGCTCAGTGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: FPVFIKLQVGRHSLSNIEEETWC*QAQWWC
Trigger: ACACCACCACTGAGCCTGCAAGCACCATGTCTCCTC...TTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGAAGCCACAGGGTGCTGGCCTTCTaGGCAGAAAGGGCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: QSHYLHIWERKHIANGSHRVLAF*AERASF
Trigger: AAAACTGGCCCTTTCTGCCAAGAAGGCCAGCACCCT...GTGGCTTCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp CAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGAAGCCACACACTGTCGTTTCTCTaGCAGGGCTGGTCGGGAATG +
Preference number: 5 (lower is better)
Translates to: QSHYLHIWERKHIANGSHTLSFL*QGWSGM
Trigger: CATTCCCGACCAGCCCTGCAAGAGAAACGACAGTGT...GTGGCTTCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp CTTTCCCTTCCAGATAAGTTACAAAGCCAGAGCACGGAAGCCAGGCCCTCATCTCCACTATTTGCATATTaGGGAAAGGAAACATATTGC +
Preference number: 5 (lower is better)
Translates to: LSLPDKLQSQSTEARPSSPLFAY*GKETYC
Trigger: GCAATATGTTTCCTTTCCCAAATATGCAAATAGTGG...AGATGAGGGCCTGGCTTCCGTGCTCTGGCTTTGTAACTTATCTGGAAGGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp GGATTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATATATTGCACCAAGATCTaGGCAACACGTGGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: GFPVFIKLQVGRHSLSNIYCTKI*ATRGAP
Trigger: GGGAGCCCCACGTGTTGCCAAGATCTTGGTGCAATA...TATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000592231.5
CDS-3UTR CAA 90 bp CAGGCACAGTCAGATCCTAAAGTTATAAACCTCCTCATGTTAAAGCTCCCTGTTTCAACTTATCCACTATaGGCATGGTGCATCACTGGG +
Preference number: 5 (lower is better)
Translates to: QAQSDPKVINLLMLKLPVSTYPL*AWCITG
Trigger: CCCAGTGATGCACCATGCCAATAGTGGATAAGTTGA...AACAGGGAGCTTTAACATGAGGAGGTTTATAACTTTAGGATCTGACTGTGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CAA 90 bp GCATTTCCTGCCTGTTTTCTTTGGTCTGAACCTATGAACTCAGGAATGACACAACCCTCTGTTTTGGGGTaGAGCAACACATATTTGCTC +
Preference number: 5 (lower is better)
Translates to: AFPACFLWSEPMNSGMTQPSVLG*SNTYLL
Trigger: GAGCAAATATGTGTTGCTCAACCCCAAAACAGAGGG...TTGTGTCATTCCTGAGTTCATAGGTTCAGACCAAAGAAAACAGGCAGGAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CAA 90 bp GTAATCAAAATCAATGTATACATGCTACTCGTTTACAGGTGTATATTCAGTCGCGGGTCATCTCCACTCTaGTGGCGACTAGCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: VIKINVYMLLVYRCIFSRGSSPL*WRLAPS
Trigger: AGAGGGAGCTAGTCGCCACAAGAGTGGAGATGACCC...GCGACTGAATATACACCTGTAAACGAGTAGCATGTATACATTGATTTTGATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589225.5
CDS-3UTR CAA 90 bp CAAAGCCACTATTTGCATATTTGGGAAAGGAAACATATTGCTAATGGAAGCCACGCCAGGCCCTCATCTTaGAACATTCAGAGACTGGTC +
Preference number: 5 (lower is better)
Translates to: QSHYLHIWERKHIANGSHARPSS*NIQRLV
Trigger: GACCAGTCTCTGAATGTTCAAAGATGAGGGCCTGGC...GTGGCTTCCATTAGCAATATGTTTCCTTTCCCAAATATGCAAATAGTGGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542802.7
ENST00000589225.5
ENST00000592231.5
CDS-3UTR CAA 90 bp GCATTTCCTGCCTGTTTTCTTTGGTCTGAACCTATGAACTCAGGAATGACACAATTGAGCAACACATATTaGCTCTTTAAGGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: AFPACFLWSEPMNSGMTQLSNTY*LFKASS
Trigger: GCTGGAGGCCTTAAAGAGCAAATATGTGTTGCTCAA...TTGTGTCATTCCTGAGTTCATAGGTTCAGACCAAAGAAAACAGGCAGGAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS-3UTR CAA 90 bp GGATTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATAAAGTTGGCAAAGCGCTaGAGGGAAAGGGTTAAGACG +
Preference number: 5 (lower is better)
Translates to: GFPVFIKLQVGRHSLSNIKLAKR*RERVKT
Trigger: CGTCTTAACCCTTTCCCTCAAGCGCTTTGCCAACTT...TATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp GGATTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATATCAACTTATCCACTATaGGCATGGTGCATCACTGGG +
Preference number: 5 (lower is better)
Translates to: GFPVFIKLQVGRHSLSNISTYPL*AWCITG
Trigger: CCCAGTGATGCACCATGCCAATAGTGGATAAGTTGA...TATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp TTTCCTGTATTTATTAAGTTACAAGTTGGCAGGCACAGCTTGAGCAACATAGAAAGAACCACCTTGACGTaGCTGGAATGGACCAAGGAA +
Preference number: 5 (lower is better)
Translates to: FPVFIKLQVGRHSLSNIERTTLT*LEWTKE
Trigger: TTCCTTGGTCCATTCCAGCAACGTCAAGGTGGTTCT...TTCTATGTTGCTCAAGCTGTGCCTGCCAACTTGTAACTTAATAAATACAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS-3UTR CAA 90 bp GCCAGTAGTTTTGCCATTTCAATCACTTATTGCCACAACTCAACTTCTCTAAAGCTGAGGCCAGTAGTTTaGCCATTTCAATCACTTATT +
Preference number: 5 (lower is better)
Translates to: ASSFAISITYCHNSTSLKLRPVV*PFQSLI
Trigger: AATAAGTGATTGAAATGGCAAAACTACTGGCCTCAG...CTTTAGAGAAGTTGAGTTGTGGCAATAAGTGATTGAAATGGCAAAACTACTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS TCA 72 bp CCGAAGCCCTGCGCGGACCCGCGCCCACGTTCTCCCTaGGCGTCCCGGCTGCGCCCGCCAGCCCTTCCCGCG +
Preference number: 6 (lower is better)
Translates to: PKPCADPRPRSP*ASRLRPPALPA
Trigger: CGCGGGAAGGGCTGGCGGGCGCAGCCGGGACGCTCAGGGAGAACGTGGGCGCGGGTCCGCGCAGGGCTTCGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000586531.5
CDS TCA 72 bp GGTCGGCCGAGCACACCTGGCGGCGTGGCGGACGCCTaGAGTGTGACAGTGGCGCGCGCCCCCGCCCCAGAA +
Preference number: 6 (lower is better)
Translates to: GRPSTPGGVADA*SVTVARAPAPE
Trigger: TTCTGGGGCGGGGGCGCGCGCCACTGTCACACTTCAGGCGTCCGCCACGCCGCCAGGTGTGCTCGGCCGACC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588365.1
CDS CCA 72 bp CCCGGCCCCGGACCCTCCTCGGGAATACCCGGGCTCTaGAGAAGCGAGCTCGCGAGCGGGCGGAGCATCCCG +
Preference number: 6 (lower is better)
Translates to: PGPGPSSGIPGL*RSELASGRSIP
Trigger: CGGGATGCTCCGCCCGCTCGCGAGCTCGCTTCTCCAGAGCCCGGGTATTCCCGAGGAGGGTCCGGGGCCGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000587783.5
CDS GCA 72 bp CGCAAGTGCGCAGAGCCACAGGCGCTCCCGCCCCTGTaGCGCGGCAGGGTGACGTCTCCGCAGCGCACTAGA +
Preference number: 6 (lower is better)
Translates to: RKCAEPQALPPL*RGRVTSPQRTR
Trigger: TCTAGTGCGCTGCGGAGACGTCACCCTGCCGCGGCACAGGGGCGGGAGCGCCTGTGGCTCTGCGCACTTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588365.1
CDS TCA 72 bp AGCCACAGGCGCTCCCGCCCCTGTGCCGCGGCAGGGTaGCGTCTCCGCAGCGCACTAGAGGTGCCGCTACTT +
Preference number: 6 (lower is better)
Translates to: SHRRSRPCAAAG*RLRSALEVPLL
Trigger: AAGTAGCGGCACCTCTAGTGCGCTGCGGAGACGTCACCCTGCCGCGGCACAGGGGCGGGAGCGCCTGTGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588365.1
CDS TCA 72 bp CGCAGAGCGGGCGTCAGAGCCTCTCCGAAGTTGACCTaGATCCTGCACAGACAGCGGGCCCCGGCGACCCCC +
Preference number: 6 (lower is better)
Translates to: RRAGVRASPKLT*ILHRQRAPATP
Trigger: GGGGGTCGCCGGGGCCCGCTGTCTGTGCAGGATTCAGGTCAACTTCGGAGAGGCTCTGACGCCCGCTCTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542802.7
CDS GCA 72 bp TGGAGTCGCTGCTGGCCGAGTGCTCTGGGCTGGAGCTaGTGGAGCCCCTCCTGTCGAGGCCAGCGCTCTCGT +
Preference number: 6 (lower is better)
Translates to: WSRCWPSALGWS*WSPSCRGQRSR
Trigger: ACGAGAGCGCTGGCCTCGACAGGAGGGGCTCCAGCAGCTCCAGCCCAGAGCACTCGGCCAGCAGCGACTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS GCA 72 bp CTCTTCCCGTGGGGAGCCGCAGTGGCCTCCCTGATGTaGTGTGGGAGGCGCGTCTCTGAGCCCAGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: LFPWGAAVASLM*CGRRVSEPSLC
Trigger: GCAGAGGCTGGGCTCAGAGACGCGCCTCCCACAGCACATCAGGGAGGCCACTGCGGCTCCCCACGGGAAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS TCA 72 bp CAGCGCCGTCGAGATGGAGGAGCAGCTCCGTGGTTCTaGCGTCCCTGGGGGCTTGGGGGTACTGGACAGCAA +
Preference number: 6 (lower is better)
Translates to: QRRRDGGAAPWF*RPWGLGGTGQQ
Trigger: TTGCTGTCCAGTACCCCCAAGCCCCCAGGGACGTCAGAACCACGGAGCTGCTCCTCCATCTCGACGGCGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CCA 72 bp CAAACACCGAAGCCGCAGAGCGGGCGTCAGAGCCTGTaGGAGGGACAGGGAGACCATCAGTGGAGGCGACTC +
Preference number: 6 (lower is better)
Translates to: QTPKPQSGRQSL*EGQGDHQWRRL
Trigger: GAGTCGCCTCCACTGATGGTCTCCCTGTCCCTCCCACAGGCTCTGACGCCCGCTCTGCGGCTTCGGTGTTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586896.2
CDS TCA 72 bp GGCTCCTTCCACAGGGGCACAGTCAGCGGCGATAGCTaGGGCTGGCAGCCTTTGCTGGGTGAGTCACAGACC +
Preference number: 6 (lower is better)
Translates to: GSFHRGTVSGDS*GWQPLLGESQT
Trigger: GGTCTGTGACTCACCCAGCAAAGGCTGCCAGCCTCAGCTATCGCCGCTGACTGTGCCCCTGTGGAAGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542802.7
ENST00000587010.5
CDS GCA 72 bp TCGAGGCCAGCGCTCTCGTCGTTCCCCTTCAGCCCATaGCCGTTGGCAGTGGCTGTAGCCAGGAGCTTAGGT +
Preference number: 6 (lower is better)
Translates to: SRPALSSFPFSP*PLAVAVARSLG
Trigger: ACCTAAGCTCCTGGCTACAGCCACTGCCAACGGGCATGGGCTGAAGGGGAACGACGAGAGCGCTGGCCTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS GCA 72 bp CATGCGGTCCCCAGGACACCAGCCATTCGCGGATGGTaGGCAGCTGCTGGACTCGGGGACAACAGCATCTTG +
Preference number: 6 (lower is better)
Translates to: HAVPRTPAIRGW*AAAGLGDNSIL
Trigger: CAAGATGCTGTTGTCCCCGAGTCCAGCAGCTGCGCACCATCCGCGAATGGCTGGTGTCCTGGGGACCGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS CCA 72 bp CAGGACACCAGCCATTCGCGGATGGTGCGCAGCTGCTaGACTCGGGGACAACAGCATCTTGGGGCTTGGCAC +
Preference number: 6 (lower is better)
Translates to: QDTSHSRMVRSC*TRGQQHLGAWH
Trigger: GTGCCAAGCCCCAAGATGCTGTTGTCCCCGAGTCCAGCAGCTGCGCACCATCCGCGAATGGCTGGTGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS CAA 90 bp CTGTCGAGGCCAGCGCTCTCGTCGTTCCCCTTCAGCCCATGCCCGTaGGCAGTGGCTGTAGCCAGGAGCTTAGGTGAGGTAGAGAGGACA +
Preference number: 6 (lower is better)
Translates to: LSRPALSSFPFSPCP*AVAVARSLGEVERT
Trigger: TGTCCTCTCTACCTCACCTAAGCTCCTGGCTACAGCCACTGCCAACGGGCATGGGCTGAAGGGGAACGACGAGAGCGCTGGCCTCGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS TCA 72 bp ACCTCCTTCCACAGGGGCACAGTCAGCGGCGATAGCTaGGGCTGGCAGCCTTTGCTGGGTGAGTCACAGACC +
Preference number: 6 (lower is better)
Translates to: TSFHRGTVSGDS*GWQPLLGESQT
Trigger: GGTCTGTGACTCACCCAGCAAAGGCTGCCAGCCTCAGCTATCGCCGCTGACTGTGCCCCTGTGGAAGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312010.10
ENST00000589225.5
CDS TCA 72 bp TCCTCCTTCCACAGGGGCACAGTCAGCGGCGATAGCTaGGGCTGGCAGCCTTTGCTGGGTGAGTCACAGACC +
Preference number: 6 (lower is better)
Translates to: SSFHRGTVSGDS*GWQPLLGESQT
Trigger: GGTCTGTGACTCACCCAGCAAAGGCTGCCAGCCTCAGCTATCGCCGCTGACTGTGCCCCTGTGGAAGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587379.1
ENST00000592231.5
CDS GCA 72 bp CCTGCCTTTGGCTCCCAGATCTGCTGCTATTCGAGTTaGTGGTCCCAGGCAGCCCCTGAGCAGTTCTGGGGG +
Preference number: 6 (lower is better)
Translates to: PAFGSQICCYSS*WSQAAPEQFWG
Trigger: CCCCCAGAACTGCTCAGGGGCTGCCTGGGACCAGCAACTCGAATAGCAGCAGATCTGGGAGCCAAAGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS GCA 72 bp TGTCCCAGGAGCCCTGCCTTTGGCTCCCAGATCTGCTaGTATTCGAGTTGCTGGTCCCAGGCAGCCCCTGAG +
Preference number: 6 (lower is better)
Translates to: CPRSPAFGSQIC*YSSCWSQAAPE
Trigger: CTCAGGGGCTGCCTGGGACCAGCAACTCGAATAGCAGCAGATCTGGGAGCCAAAGGCAGGGCTCCTGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS GCA 72 bp CTGCTCGCGTGGTGGCCGTCCGTAACACATCCCACCTaGTGGCCATTCACCTGTGGCTGTGTGCCATCTTCC +
Preference number: 6 (lower is better)
Translates to: LLAWWPSVTHPT*WPFTCGCVPSS
Trigger: GGAAGATGGCACACAGCCACAGGTGAATGGCCAGCAGGTGGGATGTGTTACGGACGGCCACCACGCGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CCA 72 bp GACCCCGAGGGCAGCTTTGGAGGAATGCAGCCGTTCTaGGACTTCAGGCCCAGGGTGGAGCCATTCCTGGAT +
Preference number: 6 (lower is better)
Translates to: DPEGSFGGMQPF*DFRPRVEPFLD
Trigger: ATCCAGGAATGGCTCCACCCTGGGCCTGAAGTCCCAGAACGGCTGCATTCCTCCAAAGCTGCCCTCGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CCA 72 bp CTCGCGTGGTGGCCGTCCGTAACACATCCCACCTGCTaGCCATTCACCTGTGGCTGTGTGCCATCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: LAWWPSVTHPTC*PFTCGCVPSSC
Trigger: GCAGGAAGATGGCACACAGCCACAGGTGAATGGCCAGCAGGTGGGATGTGTTACGGACGGCCACCACGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CCA 72 bp CAAAGCCCTGGGAGGGTGGGTGGGGAAGCACGCACTTaGCACAGCCATTCAGGCAGGCTTTCTGCATGGCGT +
Preference number: 6 (lower is better)
Translates to: QSPGRVGGEART*HSHSGRLSAWR
Trigger: ACGCCATGCAGAAAGCCTGCCTGAATGGCTGTGCCAAGTGCGTGCTTCCCCACCCACCCTCCCAGGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS CAA 72 bp CCAGCGCTCTCGTCGTTCCCCTTCAGCCCATGCCCGTaGGCAGTGGCTGTAGCCAGGAGCTTAGGTGAGGTA +
Preference number: 6 (lower is better)
Translates to: PALSSFPFSPCP*AVAVARSLGEV
Trigger: TACCTCACCTAAGCTCCTGGCTACAGCCACTGCCAACGGGCATGGGCTGAAGGGGAACGACGAGAGCGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS TCA 72 bp ATCTCCTTCCACAGGGGCACAGTCAGCGGCGATAGCTaGGGCTGGCAGCCTTTGCTGGGTGAGTCACAGACC +
Preference number: 6 (lower is better)
Translates to: ISFHRGTVSGDS*GWQPLLGESQT
Trigger: GGTCTGTGACTCACCCAGCAAAGGCTGCCAGCCTCAGCTATCGCCGCTGACTGTGCCCCTGTGGAAGGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588130.5
CDS GCA 72 bp GGTGTCCGAGACGCTCTTGCACACGGAGCACTTCACTaGAACAGAACAGAGGCAGTGGAGCAGGTGGGGCCT +
Preference number: 6 (lower is better)
Translates to: GVRDALAHGALH*NRTEAVEQVGP
Trigger: AGGCCCCACCTGCTCCACTGCCTCTGTTCTGTTGCAGTGAAGTGCTCCGTGTGCAAGAGCGTCTCGGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589254.1
CDS CCA 72 bp TACGCGGAGCTCCTGAATGTAAGCGCTCCTGGACTGTaGCCTGTTCAAACACCGAAGCCGCAGAGCGGGCGT +
Preference number: 6 (lower is better)
Translates to: YAELLNVSAPGL*PVQTPKPQSGR
Trigger: ACGCCCGCTCTGCGGCTTCGGTGTTTGAACAGGCCACAGTCCAGGAGCGCTTACATTCAGGAGCTCCGCGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000587783.5
ENST00000588086.5
ENST00000588365.1
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000591942.6
ENST00000592275.5
ENST00000592907.5
CDS CCA 72 bp CTCATACGTGTGCTCACTGCCCTGTCTCCTGGCCGGTaGGTCATCTCCACTCTTGTGGCGACTAGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: LIRVLTALSPGR*VISTLVATSSL
Trigger: GAGGGAGCTAGTCGCCACAAGAGTGGAGATGACCCACCGGCCAGGAGACAGGGCAGTGAGCACACGTATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
CDS CCA 72 bp TCACCCATGGGAGAGCAGCTGTGCCGAAGTGGGTCCTaGTGCAGGCCGCCTTCTTCACCAAGACCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: SPMGEQLCRSGS*CRPPSSPRPSA
Trigger: AGCAGAAGGTCTTGGTGAAGAAGGCGGCCTGCACCAGGACCCACTTCGGCACAGCTGCTCTCCCATGGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CCA 72 bp GGTGCGCAGCTGCTGGACTCGGGGACAACAGCATCTTaGGGCTTGGCACTCCTTGGGCATTTGAGATGCCCA +
Preference number: 6 (lower is better)
Translates to: GAQLLDSGTTAS*GLALLGHLRCP
Trigger: TGGGCATCTCAAATGCCCAAGGAGTGCCAAGCCCCAAGATGCTGTTGTCCCCGAGTCCAGCAGCTGCGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS CAA 72 bp TGGTGCGCAGCTGCTGGACTCGGGGACAACAGCATCTaGGGGCTTGGCACTCCTTGGGCATTTGAGATGCCC +
Preference number: 6 (lower is better)
Translates to: WCAAAGLGDNSI*GLGTPWAFEMP
Trigger: GGGCATCTCAAATGCCCAAGGAGTGCCAAGCCCCAAGATGCTGTTGTCCCCGAGTCCAGCAGCTGCGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS CAA 90 bp GCCCTCCACAGGGTGCTGGCCTTCTTGGCAGAAAGGGCCAGTTTTTaGGCTGGTGGAGGAGACATGGTGCTTGCAGGCTCAGTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: ALHRVLAFLAERASF*AGGGDMVLAGSVVV
Trigger: CACCACCACTGAGCCTGCAAGCACCATGTCTCCTCCACCAGCCAAAAAACTGGCCCTTTCTGCCAAGAAGGCCAGCACCCTGTGGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS TCA 72 bp CTACTGCGGCATGGAACCAGGATCTTAACGGAGGGCTaGGTTTGGTTGGGCAGGTGCTACGCGGAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: LLRHGTRILTEG*VWLGRCYAELL
Trigger: CAGGAGCTCCGCGTAGCACCTGCCCAACCAAACTCAGCCCTCCGTTAAGATCCTGGTTCCATGCCGCAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000587783.5
ENST00000588086.5
ENST00000588365.1
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000591942.6
ENST00000592275.5
ENST00000592907.5
CDS TCA 72 bp GTTTTGGAGTGGCCAGCGGTGGAACAGTTCGTTTCCTaGGAATCGCAGAGATGGGCCGCTCCACTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: VLEWPAVEQFVS*ESQRWAAPLLG
Trigger: CCCCAGGAGTGGAGCGGCCCATCTCTGCGATTCTCAGGAAACGAACTGTTCCACCGCTGGCCACTCCAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS TCA 72 bp AACTGGTGTGGAAGAGACACAAGGTCCTCGTTGACCTaGGGCAGCGCCGTCGAGATGGAGGAGCAGCTCCGT +
Preference number: 6 (lower is better)
Translates to: NWCGRDTRSSLT*GSAVEMEEQLR
Trigger: ACGGAGCTGCTCCTCCATCTCGACGGCGCTGCCTCAGGTCAACGAGGACCTTGTGTCTCTTCCACACCAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS GCA 72 bp TTCTGCATGGCGTCGATGGTGTACCGCAGGAACTCATaGGCGTCCTCCTGGTTCCCAAAGCGGAAGTGTCGG +
Preference number: 6 (lower is better)
Translates to: FCMASMVYRRNS*ASSWFPKRKCR
Trigger: CCGACACTTCCGCTTTGGGAACCAGGAGGACGCGCATGAGTTCCTGCGGTACACCATCGACGCCATGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586066.3
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
CDS GCA 72 bp TGCCACGTCTACCCAAGGGCAGCCTGGGTAGAAAGGTaGCGGGCTGGCTGTTGCCATAGGAATGTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: CHVYPRAAWVER*RAGCCHRNVLL
Trigger: CAGCAGAACATTCCTATGGCAACAGCCAGCCCGGCACCTTTCTACCCAGGCTGCCCTTGGGTAGACGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS CCA 72 bp CAGGTGCTACGCGGAGCTCCTGAATGTAAGCGCTCCTaGACTGTGGCCTGTTCAAACACCGAAGCCGCAGAG +
Preference number: 6 (lower is better)
Translates to: QVLRGAPECKRS*TVACSNTEAAE
Trigger: CTCTGCGGCTTCGGTGTTTGAACAGGCCACAGTCCAGGAGCGCTTACATTCAGGAGCTCCGCGTAGCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000587783.5
ENST00000588086.5
ENST00000588365.1
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000591942.6
ENST00000592275.5
ENST00000592907.5
CDS CCA 72 bp CCCTGTCTCCTGGCCGGTGGGTCATCTCCACTCTTGTaGCGACTAGCTCCCTCTGTTTTGGGGTTGAGCAAC +
Preference number: 6 (lower is better)
Translates to: PCLLAGGSSPLL*RLAPSVLGLSN
Trigger: GTTGCTCAACCCCAAAACAGAGGGAGCTAGTCGCCACAAGAGTGGAGATGACCCACCGGCCAGGAGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000592907.5
CDS CCA 72 bp AGCACACTGCACATCTGTACCCTGTCTCCTGGCCGGTaGGTCATCTCCACTCTTGTGGCGACTAGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: STLHICTLSPGR*VISTLVATSSL
Trigger: GAGGGAGCTAGTCGCCACAAGAGTGGAGATGACCCACCGGCCAGGAGACAGGGTACAGATGTGCAGTGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592907.5
CDS CCA 72 bp AGAGGCAAATTCTGCCACGTCTACCCAAGGGCAGCCTaGGTAGAAAGGTGCCGGGCTGGCTGTTGCCATAGG +
Preference number: 6 (lower is better)
Translates to: RGKFCHVYPRAA*VERCRAGCCHR
Trigger: CCTATGGCAACAGCCAGCCCGGCACCTTTCTACCCAGGCTGCCCTTGGGTAGACGTGGCAGAATTTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS CAA 72 bp GCTCTGGAGGCTTCCACTCTCGTGAATCAGCACCGCTaGATCATCTCCTTCCACAGGGGCACAGTCAGCGGC +
Preference number: 6 (lower is better)
Translates to: ALEASTLVNQHR*IISFHRGTVSG
Trigger: GCCGCTGACTGTGCCCCTGTGGAAGGAGATGATCAAGCGGTGCTGATTCACGAGAGTGGAAGCCTCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588130.5
CDS CAA 72 bp GTACCCTGTCTCCTGGCCGGTGGGTCATCTCCACTCTaGTGGCGACTAGCTCCCTCTGTTTTGGGGTTGAGC +
Preference number: 6 (lower is better)
Translates to: VPCLLAGGSSPL*WRLAPSVLGLS
Trigger: GCTCAACCCCAAAACAGAGGGAGCTAGTCGCCACAAGAGTGGAGATGACCCACCGGCCAGGAGACAGGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592907.5
CDS CAA 90 bp GATGGTGCGCAGCTGCTGGACTCGGGGACAACAGCATCTTGGGGCTaGGCACTCCTTGGGCATTTGAGATGCCCATCCTCTTCTACTGCC +
Preference number: 6 (lower is better)
Translates to: DGAQLLDSGTTASWG*ALLGHLRCPSSSTA
Trigger: GGCAGTAGAAGAGGATGGGCATCTCAAATGCCCAAGGAGTGCCAAGCCCCAAGATGCTGTTGTCCCCGAGTCCAGCAGCTGCGCACCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS CAA 90 bp ATTCGCGGATGGTGCGCAGCTGCTGGACTCGGGGACAACAGCATCTaGGGGCTTGGCACTCCTTGGGCATTTGAGATGCCCATCCTCTTC +
Preference number: 6 (lower is better)
Translates to: IRGWCAAAGLGDNSI*GLGTPWAFEMPILF
Trigger: GAAGAGGATGGGCATCTCAAATGCCCAAGGAGTGCCAAGCCCCAAGATGCTGTTGTCCCCGAGTCCAGCAGCTGCGCACCATCCGCGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS TCA 72 bp CGCTGTTGGCGAAGGCCTGGACAATGTGGTTCTGCATaGCACACAGCATGCAGAAGCTTCCCTGGTGGCAGC +
Preference number: 6 (lower is better)
Translates to: RCWRRPGQCGSA*HTACRSFPGGS
Trigger: GCTGCCACCAGGGAAGCTTCTGCATGCTGTGTGTCATGCAGAACCACATTGTCCAGGCCTTCGCCAACAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
CDS TCA 72 bp ATGCCCGTTGGCAGTGGCTGTAGCCAGGAGCTTAGGTaGGGTAGAGAGGACAACATCCCTGCTGTCCCAGGA +
Preference number: 6 (lower is better)
Translates to: MPVGSGCSQELR*GREDNIPAVPG
Trigger: TCCTGGGACAGCAGGGATGTTGTCCTCTCTACCTCACCTAAGCTCCTGGCTACAGCCACTGCCAACGGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS GCA 72 bp CAGGACAGGGGACTTCAGCTTCACCGTCTTAGAATCTaGTCCACTTGGCGGCGTTTTGGAGTGGCCAGCGGT +
Preference number: 6 (lower is better)
Translates to: QDRGLQLHRLRI*STWRRFGVASG
Trigger: ACCGCTGGCCACTCCAAAACGCCGCCAAGTGGAGCAGATTCTAAGACGGTGAAGCTGAAGTCCCCTGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS GCA 72 bp ATGTGCTGTGGGAGGCGCGTCTCTGAGCCCAGCCTCTaGGGCTCTCCCACAAAGGTCTTTTTCCTCTTCTCA +
Preference number: 6 (lower is better)
Translates to: MCCGRRVSEPSL*GSPTKVFFLFS
Trigger: TGAGAAGAGGAAAAAGACCTTTGTGGGAGAGCCGCAGAGGCTGGGCTCAGAGACGCGCCTCCCACAGCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS GCA 72 bp GCATCTTGGGGCTTGGCACTCCTTGGGCATTTGAGATaGCCATCCTCTTCTACTGCCCGCTGTGTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: ASWGLALLGHLR*PSSSTARCVSC
Trigger: GCAGGAGACACAGCGGGCAGTAGAAGAGGATGGGCATCTCAAATGCCCAAGGAGTGCCAAGCCCCAAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS GCA 72 bp CGTCCAAGTAGGGGTCGTAGGTGTCCGAGACGCTCTTaGACACGGAGCACTTCACTGCAACAGAACAGAGGC +
Preference number: 6 (lower is better)
Translates to: RPSRGRRCPRRS*TRSTSLQQNRG
Trigger: GCCTCTGTTCTGTTGCAGTGAAGTGCTCCGTGTGCAAGAGCGTCTCGGACACCTACGACCCCTACTTGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589254.1
CDS GCA 72 bp AGCACGCACTTGGCACAGCCATTCAGGCAGGCTTTCTaGATGGCGTCGATGGTGTACCGCAGGAACTCATGC +
Preference number: 6 (lower is better)
Translates to: STHLAQPFRQAF*MASMVYRRNSC
Trigger: GCATGAGTTCCTGCGGTACACCATCGACGCCATGCAGAAAGCCTGCCTGAATGGCTGTGCCAAGTGCGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS CCA 72 bp GGGACTTCAGGCCCAGGGTGGAGCCATTCCTGGATATaGGCACACCAATCTCTTCAGTGGTGTGCGGCTTCT +
Preference number: 6 (lower is better)
Translates to: GTSGPGWSHSWI*AHQSLQWCAAS
Trigger: AGAAGCCGCACACCACTGAAGAGATTGGTGTGCCCATATCCAGGAATGGCTCCACCCTGGGCCTGAAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CCA 72 bp CGTTCTGGGACTTCAGGCCCAGGGTGGAGCCATTCCTaGATATGGGCACACCAATCTCTTCAGTGGTGTGCG +
Preference number: 6 (lower is better)
Translates to: RSGTSGPGWSHS*IWAHQSLQWCA
Trigger: CGCACACCACTGAAGAGATTGGTGTGCCCATATCCAGGAATGGCTCCACCCTGGGCCTGAAGTCCCAGAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CCA 72 bp CTGCTCCACTTGGCGGCGTTTTGGAGTGGCCAGCGGTaGAACAGTTCGTTTCCTGAGAATCGCAGAGATGGG +
Preference number: 6 (lower is better)
Translates to: LLHLAAFWSGQR*NSSFPENRRDG
Trigger: CCCATCTCTGCGATTCTCAGGAAACGAACTGTTCCACCGCTGGCCACTCCAAAACGCCGCCAAGTGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CCA 72 bp CTCGGGGACAACAGCATCTTGGGGCTTGGCACTCCTTaGGCATTTGAGATGCCCATCCTCTTCTACTGCCCG +
Preference number: 6 (lower is better)
Translates to: LGDNSILGLGTP*AFEMPILFYCP
Trigger: CGGGCAGTAGAAGAGGATGGGCATCTCAAATGCCCAAGGAGTGCCAAGCCCCAAGATGCTGTTGTCCCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS CCA 72 bp GAGACCCAGCAGGGAGGCAGACTCTCAGCAGGGCTTTaGCCAAAGATGAGATTCCCACTAGCCCCTGAAGCA +
Preference number: 6 (lower is better)
Translates to: ETQQGGRLSAGL*PKMRFPLAPEA
Trigger: TGCTTCAGGGGCTAGTGGGAATCTCATCTTTGGCCAAAGCCCTGCTGAGAGTCTGCCTCCCTGCTGGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589254.1
CDS CAA 72 bp GCGGCATGGAACCAGGATCTTAACGGAGGGCTGAGTTaGGTTGGGCAGGTGCTACGCGGAGCTCCTGAATGT +
Preference number: 6 (lower is better)
Translates to: AAWNQDLNGGLS*VGQVLRGAPEC
Trigger: ACATTCAGGAGCTCCGCGTAGCACCTGCCCAACCAAACTCAGCCCTCCGTTAAGATCCTGGTTCCATGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000587783.5
ENST00000588086.5
ENST00000588365.1
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000591942.6
ENST00000592275.5
ENST00000592907.5
CDS CAA 72 bp CGGATGAAGGAGACGGGCTTGATGGCGTTGCCGCTGTaGGCGAAGGCCTGGACAATGTGGTTCTGCATGACA +
Preference number: 6 (lower is better)
Translates to: RMKETGLMALPL*AKAWTMWFCMT
Trigger: TGTCATGCAGAACCACATTGTCCAGGCCTTCGCCAACAGCGGCAACGCCATCAAGCCCGTCTCCTTCATCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
CDS CAA 72 bp TTCAGGTCTCGGATGAAGGAGACGGGCTTGATGGCGTaGCCGCTGTTGGCGAAGGCCTGGACAATGTGGTTC +
Preference number: 6 (lower is better)
Translates to: FRSRMKETGLMA*PLLAKAWTMWF
Trigger: GAACCACATTGTCCAGGCCTTCGCCAACAGCGGCAACGCCATCAAGCCCGTCTCCTTCATCCGAGACCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
CDS CAA 72 bp GCGATCTTTTTCAGGTCTCGGATGAAGGAGACGGGCTaGATGGCGTTGCCGCTGTTGGCGAAGGCCTGGACA +
Preference number: 6 (lower is better)
Translates to: AIFFRSRMKETG*MALPLLAKAWT
Trigger: TGTCCAGGCCTTCGCCAACAGCGGCAACGCCATCAAGCCCGTCTCCTTCATCCGAGACCTGAAAAAGATCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586066.3
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
CDS CAA 72 bp CAGCTGCTGGACTCGGGGACAACAGCATCTTGGGGCTaGGCACTCCTTGGGCATTTGAGATGCCCATCCTCT +
Preference number: 6 (lower is better)
Translates to: QLLDSGTTASWG*ALLGHLRCPSS
Trigger: AGAGGATGGGCATCTCAAATGCCCAAGGAGTGCCAAGCCCCAAGATGCTGTTGTCCCCGAGTCCAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS CAA 90 bp GAGGAGGCAAGAAGCTTCCCCAGTTCTCCATCATCAGCCGAGTCCTaGCGGCCGGGTTTCAGGGCCTCCTTCAACTTATCCACTATTGGC +
Preference number: 6 (lower is better)
Translates to: EEARSFPSSPSSAES*RPGFRASFNLSTIG
Trigger: GCCAATAGTGGATAAGTTGAAGGAGGCCCTGAAACCCGGCCGCAAGGACTCGGCTGATGATGGAGAACTGGGGAAGCTTCTTGCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000587783.5
ENST00000588086.5
ENST00000588365.1
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000591942.6
ENST00000592275.5
ENST00000592907.5
CDS CAA 90 bp GTGTGCTCACTGCCCTGTCTCCTGGCCGGTGGGTCATCTCCACTCTaGTGGCGACTAGCTCCCTCTGTTTTGGGGTTGAGCAACACATAT +
Preference number: 6 (lower is better)
Translates to: VCSLPCLLAGGSSPL*WRLAPSVLGLSNTY
Trigger: ATATGTGTTGCTCAACCCCAAAACAGAGGGAGCTAGTCGCCACAAGAGTGGAGATGACCCACCGGCCAGGAGACAGGGCAGTGAGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
CDS CAA 90 bp TTCAGGTCTCGGATGAAGGAGACGGGCTTGATGGCGTTGCCGCTGTaGGCGAAGGCCTGGACAATGTGGTTCTGCATGACACACAGCATG +
Preference number: 6 (lower is better)
Translates to: FRSRMKETGLMALPL*AKAWTMWFCMTHSM
Trigger: CATGCTGTGTGTCATGCAGAACCACATTGTCCAGGCCTTCGCCAACAGCGGCAACGCCATCAAGCCCGTCTCCTTCATCCGAGACCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
CDS CAA 90 bp AAGTGTCGGGCGATCTTTTTCAGGTCTCGGATGAAGGAGACGGGCTaGATGGCGTTGCCGCTGTTGGCGAAGGCCTGGACAATGTGGTTC +
Preference number: 6 (lower is better)
Translates to: KCRAIFFRSRMKETG*MALPLLAKAWTMWF
Trigger: GAACCACATTGTCCAGGCCTTCGCCAACAGCGGCAACGCCATCAAGCCCGTCTCCTTCATCCGAGACCTGAAAAAGATCGCCCGACACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
CDS CAA 90 bp GACTCGGGGACAACAGCATCTTGGGGCTTGGCACTCCTTGGGCATTaGAGATGCCCATCCTCTTCTACTGCCCGCTGTGTCTCCTGCTTT +
Preference number: 6 (lower is better)
Translates to: DSGTTASWGLALLGH*RCPSSSTARCVSCF
Trigger: AAAGCAGGAGACACAGCGGGCAGTAGAAGAGGATGGGCATCTCAAATGCCCAAGGAGTGCCAAGCCCCAAGATGCTGTTGTCCCCGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS TCA 72 bp TCAGTCCGGGCCTGTCTGCTGTCTTCAATAGCATCCTaGCTGACCGCCGACATCTTGCCATCCCAGGTCAGA +
Preference number: 6 (lower is better)
Translates to: SVRACLLSSIAS*LTADILPSQVR
Trigger: TCTGACCTGGGATGGCAAGATGTCGGCGGTCAGTCAGGATGCTATTGAAGACAGCAGACAGGCCCGGACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588130.5
ENST00000589225.5
CDS GCA 72 bp GGCATGGTGCATCACTGGGATGTGCAGACTTGGGCCTaGTGTCCTACTGCGGCATGGAACCAGGATCTTAAC +
Preference number: 6 (lower is better)
Translates to: GMVHHWDVQTWA*CPTAAWNQDLN
Trigger: GTTAAGATCCTGGTTCCATGCCGCAGTAGGACAGCAGGCCCAAGTCTGCACATCCCAGTGATGCACCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000587783.5
ENST00000588086.5
ENST00000588365.1
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000591942.6
ENST00000592275.5
ENST00000592907.5
CDS GCA 72 bp GAAGCTTCCCCAGTTCTCCATCATCAGCCGAGTCCTTaGGGCCGGGTTTCAGGGCCTCCTTCAACTTATCCA +
Preference number: 6 (lower is better)
Translates to: EASPVLHHQPSP*GRVSGPPSTYP
Trigger: TGGATAAGTTGAAGGAGGCCCTGAAACCCGGCCGCAAGGACTCGGCTGATGATGGAGAACTGGGGAAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000587783.5
ENST00000588086.5
ENST00000588365.1
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000591942.6
ENST00000592275.5
ENST00000592907.5
CDS CCA 72 bp ATGGCGTTGCCGCTGTTGGCGAAGGCCTGGACAATGTaGTTCTGCATGACACACAGCATGCAGAAGCTTCCC +
Preference number: 6 (lower is better)
Translates to: MALPLLAKAWTM*FCMTHSMQKLP
Trigger: GGGAAGCTTCTGCATGCTGTGTGTCATGCAGAACCACATTGTCCAGGCCTTCGCCAACAGCGGCAACGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
CDS CCA 72 bp TCGATGGTGTACCGCAGGAACTCATGCGCGTCCTCCTaGTTCCCAAAGCGGAAGTGTCGGGCGATCTTTTTC +
Preference number: 6 (lower is better)
Translates to: SMVYRRNSCASS*FPKRKCRAIFF
Trigger: GAAAAAGATCGCCCGACACTTCCGCTTTGGGAACCAGGAGGACGCGCATGAGTTCCTGCGGTACACCATCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586066.3
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
CDS CAA 72 bp CACTATTGGCATGGTGCATCACTGGGATGTGCAGACTaGGGCCTGCTGTCCTACTGCGGCATGGAACCAGGA +
Preference number: 6 (lower is better)
Translates to: HYWHGASLGCAD*GLLSYCGMEPG
Trigger: TCCTGGTTCCATGCCGCAGTAGGACAGCAGGCCCAAGTCTGCACATCCCAGTGATGCACCATGCCAATAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000587783.5
ENST00000588086.5
ENST00000588365.1
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000591942.6
ENST00000592275.5
ENST00000592907.5
CDS CAA 72 bp AGAAGCTTCCCCAGTTCTCCATCATCAGCCGAGTCCTaGCGGCCGGGTTTCAGGGCCTCCTTCAACTTATCC +
Preference number: 6 (lower is better)
Translates to: RSFPSSPSSAES*RPGFRASFNLS
Trigger: GGATAAGTTGAAGGAGGCCCTGAAACCCGGCCGCAAGGACTCGGCTGATGATGGAGAACTGGGGAAGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000587783.5
ENST00000588086.5
ENST00000588365.1
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000591942.6
ENST00000592275.5
ENST00000592907.5
CDS CAA 90 bp GCGATCTTTTTCAGGTCTCGGATGAAGGAGACGGGCTTGATGGCGTaGCCGCTGTTGGCGAAGGCCTGGACAATGTGGTTCTGCATGACA +
Preference number: 6 (lower is better)
Translates to: AIFFRSRMKETGLMA*PLLAKAWTMWFCMT
Trigger: TGTCATGCAGAACCACATTGTCCAGGCCTTCGCCAACAGCGGCAACGCCATCAAGCCCGTCTCCTTCATCCGAGACCTGAAAAAGATCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
CDS CAA 90 bp CCCCCGCTGAAGTTGGCAAAGCGCTTGAGGGAAAGGGTTAAGACGTaGGATGTTCTGTGGATGGTGAAGCGCTTGCTGGCTGGAACCTTC +
Preference number: 6 (lower is better)
Translates to: PPLKLAKRLRERVKT*DVLWMVKRLLAGTF
Trigger: GAAGGTTCCAGCCAGCAAGCGCTTCACCATCCACAGAACATCCAACGTCTTAACCCTTTCCCTCAAGCGCTTTGCCAACTTCAGCGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586066.3
ENST00000588086.5
ENST00000588467.5
ENST00000589225.5
ENST00000589254.1
ENST00000590312.1
CDS TCA 72 bp CAACAGCATCTTGGGGCTTGGCACTCCTTGGGCATTTaGGATGCCCATCCTCTTCTACTGCCCGCTGTGTCT +
Preference number: 6 (lower is better)
Translates to: QQHLGAWHSLGI*DAHPLLLPAVS
Trigger: AGACACAGCGGGCAGTAGAAGAGGATGGGCATCTCAAATGCCCAAGGAGTGCCAAGCCCCAAGATGCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS GCA 72 bp AGGGCAGCCTGGGTAGAAAGGTGCCGGGCTGGCTGTTaGCATAGGAATGTTCTGCTGCCACCATGTAGAAAA +
Preference number: 6 (lower is better)
Translates to: RAAWVERCRAGC*HRNVLLPPCRK
Trigger: TTTTCTACATGGTGGCAGCAGAACATTCCTATGGCAACAGCCAGCCCGGCACCTTTCTACCCAGGCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS CCA 72 bp ACTATTGGCATGGTGCATCACTGGGATGTGCAGACTTaGGCCTGCTGTCCTACTGCGGCATGGAACCAGGAT +
Preference number: 6 (lower is better)
Translates to: TIGMVHHWDVQT*ACCPTAAWNQD
Trigger: ATCCTGGTTCCATGCCGCAGTAGGACAGCAGGCCCAAGTCTGCACATCCCAGTGATGCACCATGCCAATAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000587783.5
ENST00000588086.5
ENST00000588365.1
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000591942.6
ENST00000592275.5
ENST00000592907.5
CDS CCA 72 bp GCCGGGTTTCAGGGCCTCCTTCAACTTATCCACTATTaGCATGGTGCATCACTGGGATGTGCAGACTTGGGC +
Preference number: 6 (lower is better)
Translates to: AGFQGLLQLIHY*HGASLGCADLG
Trigger: GCCCAAGTCTGCACATCCCAGTGATGCACCATGCCAATAGTGGATAAGTTGAAGGAGGCCCTGAAACCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000587783.5
ENST00000588086.5
ENST00000588365.1
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000591942.6
ENST00000592275.5
ENST00000592907.5
CDS CCA 72 bp GGACTTCAGCTTCACCGTCTTAGAATCTGCTCCACTTaGCGGCGTTTTGGAGTGGCCAGCGGTGGAACAGTT +
Preference number: 6 (lower is better)
Translates to: GLQLHRLRICST*RRFGVASGGTV
Trigger: AACTGTTCCACCGCTGGCCACTCCAAAACGCCGCCAAGTGGAGCAGATTCTAAGACGGTGAAGCTGAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CAA 72 bp GGCCGGGTTTCAGGGCCTCCTTCAACTTATCCACTATaGGCATGGTGCATCACTGGGATGTGCAGACTTGGG +
Preference number: 6 (lower is better)
Translates to: GRVSGPPSTYPL*AWCITGMCRLG
Trigger: CCCAAGTCTGCACATCCCAGTGATGCACCATGCCAATAGTGGATAAGTTGAAGGAGGCCCTGAAACCCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000587783.5
ENST00000588086.5
ENST00000588365.1
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000591942.6
ENST00000592275.5
ENST00000592907.5
CDS CAA 72 bp ACAACAGCATCTTGGGGCTTGGCACTCCTTGGGCATTaGAGATGCCCATCCTCTTCTACTGCCCGCTGTGTC +
Preference number: 6 (lower is better)
Translates to: TTASWGLALLGH*RCPSSSTARCV
Trigger: GACACAGCGGGCAGTAGAAGAGGATGGGCATCTCAAATGCCCAAGGAGTGCCAAGCCCCAAGATGCTGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS CAA 90 bp GCCGGTGGGTCATCTCCACTCTTGTGGCGACTAGCTCCCTCTGTTTaGGGGTTGAGCAACACATATTTGCTCTTTAAGGCCTCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: AGGSSPLLWRLAPSV*GLSNTYLLFKASSW
Trigger: CCAGCTGGAGGCCTTAAAGAGCAAATATGTGTTGCTCAACCCCAAAACAGAGGGAGCTAGTCGCCACAAGAGTGGAGATGACCCACCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000592907.5
CDS CAA 90 bp TGCACATCTGTACCCTGTCTCCTGGCCGGTGGGTCATCTCCACTCTaGTGGCGACTAGCTCCCTCTGTTTTGGGGTTGAGCAACACATAT +
Preference number: 6 (lower is better)
Translates to: CTSVPCLLAGGSSPL*WRLAPSVLGLSNTY
Trigger: ATATGTGTTGCTCAACCCCAAAACAGAGGGAGCTAGTCGCCACAAGAGTGGAGATGACCCACCGGCCAGGAGACAGGGTACAGATGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592907.5
CDS CAA 90 bp CTTTCCCAGGAAGCAAGGGCAATCCCCTATTTGGGCTCCAACAGTTaGAGTACCCAGAGGCAAATTCTGCCACGTCTACCCAAGGGCAGC +
Preference number: 6 (lower is better)
Translates to: LSQEARAIPYLGSNS*STQRQILPRLPKGS
Trigger: GCTGCCCTTGGGTAGACGTGGCAGAATTTGCCTCTGGGTACTCAAACTGTTGGAGCCCAAATAGGGGATTGCCCTTGCTTCCTGGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS CAA 90 bp TCTCCGGAGACAGCCCTTTCCCAGGAAGCAAGGGCAATCCCCTATTaGGGCTCCAACAGTTTGAGTACCCAGAGGCAAATTCTGCCACGT +
Preference number: 6 (lower is better)
Translates to: SPETALSQEARAIPY*GSNSLSTQRQILPR
Trigger: ACGTGGCAGAATTTGCCTCTGGGTACTCAAACTGTTGGAGCCCAAATAGGGGATTGCCCTTGCTTCCTGGGAAAGGGCTGTCTCCGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS TCA 72 bp GAGGAAATAATCCCATTGCCGATGTTCTTCTTGGAGTaGTCTGGAATCACACTCGGGCGGCCGGGAAGGGAG +
Preference number: 6 (lower is better)
Translates to: EEIIPLPMFFLE*SGITLGRPGRE
Trigger: CTCCCTTCCCGGCCGCCCGAGTGTGATTCCAGATCACTCCAAGAAGAACATCGGCAATGGGATTATTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586066.3
ENST00000588086.5
ENST00000588467.5
ENST00000589225.5
CDS CCA 72 bp AATAATCCCATTGCCGATGTTCTTCTTGGAGTGATCTaGAATCACACTCGGGCGGCCGGGAAGGGAGGAGGA +
Preference number: 6 (lower is better)
Translates to: NNPIADVLLGVI*NHTRAAGKGGG
Trigger: TCCTCCTCCCTTCCCGGCCGCCCGAGTGTGATTCCAGATCACTCCAAGAAGAACATCGGCAATGGGATTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586066.3
ENST00000588086.5
ENST00000588467.5
ENST00000589225.5
CDS TCA 72 bp AGGGCTTTGGCCAAAGATGAGATTCCCACTAGCCCCTaGAGCATCCTGGTGTCCGAACAGAGAGCTCTCTTT +
Preference number: 6 (lower is better)
Translates to: RALAKDEIPTSP*SILVSEQRALF
Trigger: AAAGAGAGCTCTCTGTTCGGACACCAGGATGCTTCAGGGGCTAGTGGGAATCTCATCTTTGGCCAAAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589254.1
CDS TCA 72 bp TCAATATTTAAGTCCATCCACTTCGTCACCCCGGAGTaGGGGCCTCTCTGCCAGCACACTGCACATCTGTAC +
Preference number: 6 (lower is better)
Translates to: SIFKSIHFVTPE*GPLCQHTAHLY
Trigger: GTACAGATGTGCAGTGTGCTGGCAGAGAGGCCCTCACTCCGGGGTGACGAAGTGGATGGACTTAAATATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592907.5
CDS CCA 72 bp CGCTTGAGGGAAAGGGTTAAGACGTTGGATGTTCTGTaGATGGTGAAGCGCTTGCTGGCTGGAACCTTCTTC +
Preference number: 6 (lower is better)
Translates to: RLRERVKTLDVL*MVKRLLAGTFF
Trigger: GAAGAAGGTTCCAGCCAGCAAGCGCTTCACCATCCACAGAACATCCAACGTCTTAACCCTTTCCCTCAAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586066.3
ENST00000588086.5
ENST00000588467.5
ENST00000589225.5
ENST00000589254.1
ENST00000590312.1
CDS CCA 72 bp AGCCATTCCTGGATATGGGCACACCAATCTCTTCAGTaGTGTGCGGCTTCTTCATCGTCCCAGAGTCTTGTC +
Preference number: 6 (lower is better)
Translates to: SHSWIWAHQSLQ*CAASSSSQSLV
Trigger: GACAAGACTCTGGGACGATGAAGAAGCCGCACACCACTGAAGAGATTGGTGTGCCCATATCCAGGAATGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000588086.5
ENST00000589225.5
CDS CAA 72 bp GAAGCAAGGGCAATCCCCTATTTGGGCTCCAACAGTTaGAGTACCCAGAGGCAAATTCTGCCACGTCTACCC +
Preference number: 6 (lower is better)
Translates to: EARAIPYLGSNS*STQRQILPRLP
Trigger: GGGTAGACGTGGCAGAATTTGCCTCTGGGTACTCAAACTGTTGGAGCCCAAATAGGGGATTGCCCTTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS TCA 72 bp AAGCAAGGGCAATCCCCTATTTGGGCTCCAACAGTTTaGGTACCCAGAGGCAAATTCTGCCACGTCTACCCA +
Preference number: 6 (lower is better)
Translates to: KQGQSPIWAPTV*VPRGKFCHVYP
Trigger: TGGGTAGACGTGGCAGAATTTGCCTCTGGGTACTCAAACTGTTGGAGCCCAAATAGGGGATTGCCCTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590546.6
CDS CCA 72 bp GCCTGCTGGTTCAGAACCACCTTGACGTTGCTGGAATaGACCAAGGAATCATTCATCTGGTACCACTGTCCA +
Preference number: 6 (lower is better)
Translates to: ACWFRTTLTLLE*TKESFIWYHCP
Trigger: TGGACAGTGGTACCAGATGAATGATTCCTTGGTCCATTCCAGCAACGTCAAGGTGGTTCTGAACCAGCAGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586066.3
ENST00000588086.5
ENST00000588467.5
ENST00000589225.5
ENST00000590312.1
CDS CAA 72 bp CCACTCTTGTGGCGACTAGCTCCCTCTGTTTTGGGGTaGAGCAACACATATTTGCTCTTTAAGGCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: PLLWRLAPSVLG*SNTYLLFKASS
Trigger: GCTGGAGGCCTTAAAGAGCAAATATGTGTTGCTCAACCCCAAAACAGAGGGAGCTAGTCGCCACAAGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000592275.5
ENST00000592907.5
CDS CAA 72 bp AAGTTGGCAAAGCGCTTGAGGGAAAGGGTTAAGACGTaGGATGTTCTGTGGATGGTGAAGCGCTTGCTGGCT +
Preference number: 6 (lower is better)
Translates to: KLAKRLRERVKT*DVLWMVKRLLA
Trigger: AGCCAGCAAGCGCTTCACCATCCACAGAACATCCAACGTCTTAACCCTTTCCCTCAAGCGCTTTGCCAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586066.3
ENST00000588086.5
ENST00000588467.5
ENST00000589225.5
ENST00000589254.1
ENST00000590312.1
CDS TCA 72 bp AGAACAGCACGTAGGCCTGCTGGTTCAGAACCACCTTaGCGTTGCTGGAATGGACCAAGGAATCATTCATCT +
Preference number: 6 (lower is better)
Translates to: RTARRPAGSEPP*RCWNGPRNHSS
Trigger: AGATGAATGATTCCTTGGTCCATTCCAGCAACGTCAAGGTGGTTCTGAACCAGCAGGCCTACGTGCTGTTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586066.3
ENST00000588086.5
ENST00000588467.5
ENST00000589225.5
ENST00000590312.1
CDS TCA 72 bp GATCCAACCATGGCACTTCCCAGACTCCGGGAGCTCTaGAATACTTGGGGGACCAATACAGGATCATTCAAT +
Preference number: 6 (lower is better)
Translates to: DPTMALPRLREL*NTWGTNTGSFN
Trigger: ATTGAATGATCCTGTATTGGTCCCCCAAGTATTTCAGAGCTCCCGGAGTCTGGGAAGTGCCATGGTTGGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586066.3
CDS GCA 72 bp TGCTCTTTAAGGCCTCCAGCTGGTAGGAGAAGCTCTTaGTGGCTGGCTCGAACTCGATTTTCTGTAAAAGGA +
Preference number: 6 (lower is better)
Translates to: CSLRPPAGRRSS*WLARTRFSVKG
Trigger: TCCTTTTACAGAAAATCGAGTTCGAGCCAGCCAGCAAGAGCTTCTCCTACCAGCTGGAGGCCTTAAAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586531.5
ENST00000586896.2
ENST00000587783.5
ENST00000588086.5
ENST00000589225.5
ENST00000589424.5
ENST00000590546.6
ENST00000592275.5
ENST00000592907.5
CDS GCA 72 bp ATTTTTATTTTGGCACAGCCATTCAGGCAGGCTTTCTaGATGGCGTCGATGGTGTACCGCAGGAACTCATGC +
Preference number: 6 (lower is better)
Translates to: IFILAQPFRQAF*MASMVYRRNSC
Trigger: GCATGAGTTCCTGCGGTACACCATCGACGCCATGCAGAAAGCCTGCCTGAATGGCTGTGCCAAAATAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586066.3
ENST00000589424.5
CDS CCA 72 bp GTTGGATGTTCTGTGGATGGTGAAGCGCTTGCTGGCTaGAACCTTCTTCTTGCATTTAGCACACATGTAGGC +
Preference number: 6 (lower is better)
Translates to: VGCSVDGEALAG*NLLLAFSTHVG
Trigger: GCCTACATGTGTGCTAAATGCAAGAAGAAGGTTCCAGCCAGCAAGCGCTTCACCATCCACAGAACATCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586066.3
ENST00000588086.5
ENST00000589225.5
ENST00000589254.1
CDS CCA 72 bp GTTGGATGTTCTGTGGATGGTGAAGCGCTTGCTGGCTaGAACCTTCTTCTTGCATCTATGAAGAAGGTGATG +
Preference number: 6 (lower is better)
Translates to: VGCSVDGEALAG*NLLLASMKKVM
Trigger: CATCACCTTCTTCATAGATGCAAGAAGAAGGTTCCAGCCAGCAAGCGCTTCACCATCCACAGAACATCCAAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590312.1
CDS CAA 72 bp GTTAAGACGTTGGATGTTCTGTGGATGGTGAAGCGCTaGCTGGCTGGAACCTTCTTCTTGCATTTAGCACAC +
Preference number: 6 (lower is better)
Translates to: VKTLDVLWMVKR*LAGTFFLHLAH
Trigger: GTGTGCTAAATGCAAGAAGAAGGTTCCAGCCAGCAAGCGCTTCACCATCCACAGAACATCCAACGTCTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312010.10
ENST00000449938.6
ENST00000542802.7
ENST00000586066.3
ENST00000588086.5
ENST00000589225.5
ENST00000589254.1
CDS CAA 72 bp GTTAAGACGTTGGATGTTCTGTGGATGGTGAAGCGCTaGCTGGCTGGAACCTTCTTCTTGCATCAGGAAACT +
Preference number: 6 (lower is better)
Translates to: VKTLDVLWMVKR*LAGTFFLHQET
Trigger: AGTTTCCTGATGCAAGAAGAAGGTTCCAGCCAGCAAGCGCTTCACCATCCACAGAACATCCAACGTCTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588467.5
CDS TCA 72 bp GAACTTTTCTCCCGTAAGCTTTATCAGATGAGTATTTaGGCAGTTCCTGGACCACATCAGACTCCCGCTCTC +
Preference number: 6 (lower is better)
Translates to: ELFSRKLYQMSI*AVPGPHQTPAL
Trigger: GAGAGCGGGAGTCTGATGTGGTCCAGGAACTGCTCAAATACTCATCTGATAAAGCTTACGGGAGAAAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS TCA 72 bp CCAGGTCAGAACTTTTCTCCCGTAAGCTTTATCAGATaGGTATTTGAGCAGTTCCTGGACCACATCAGACTC +
Preference number: 6 (lower is better)
Translates to: PGQNFSPVSFIR*VFEQFLDHIRL
Trigger: GAGTCTGATGTGGTCCAGGAACTGCTCAAATACTCATCTGATAAAGCTTACGGGAGAAAAGTTCTGACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312010.10
ENST00000542802.7
ENST00000589225.5
CDS TCA 72 bp ATCCTGGTGTCCGAACAGAGAGCTCTCTTTCACCACTaGAGTTCACAAAGATGGATGTCAATATCTTTGCAC +
Preference number: 6 (lower is better)
Translates to: ILVSEQRALFHH*SSQRWMSISLH
Trigger: GTGCAAAGATATTGACATCCATCTTTGTGAACTTCAGTGGTGAAAGAGAGCTCTCTGTTCGGACACCAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589254.1
CDS CAA 72 bp CATGGCACTTCCCAGACTCCGGGAGCTCTGAAATACTaGGGGGACCAATACAGGATCATTCAATTTTTATTT +
Preference number: 6 (lower is better)
Translates to: HGTSQTPGALKY*GDQYRIIQFLF
Trigger: AAATAAAAATTGAATGATCCTGTATTGGTCCCCCAAGTATTTCAGAGCTCCCGGAGTCTGGGAAGTGCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000586066.3