RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP35 (Homo sapiens)

Ensembl gene IDs: ENSG00000118369

Ensembl transcript IDs: ENST00000526425.1, ENST00000528910.5, ENST00000529308.6, ENST00000530267.5, ENST00000530521.1, ENST00000530535.5, ENST00000530546.5

Found 663 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGGCAGGCGGAGCAGCAGGGGGATGGAGACGTCATCCAGGATCTTaGGGCGCCGCATGGTGCGCAGGTCGAAAGAGAAGCGCAGCAGTG +
Preference number: 1 (lower is better)
Translates to: VAGGAAGGWRRHPGS*GAAWCAGRKRSAAV
Trigger: CACTGCTGCGCTTCTCTTTCGACCTGCGCACCATGCGGCGCCGCAAGATCCTGGATGACGTCTCCATCCCCCTGCTGCTCCGCCTGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR GCA 90 bp TCGTGCAGCCGATCCAGCAGGTACTTCAGATACTCCGAGCAGTCCTaGTGGGTGCCAGGGCTGAACCAGGGCGTCCAGGATGCGGAGAGG +
Preference number: 1 (lower is better)
Translates to: SCSRSSRYFRYSEQS*WVPGLNQGVQDAER
Trigger: CCTCTCCGCATCCTGGACGCCCTGGTTCAGCCCTGGCACCCAGCAGGACTGCTCGGAGTATCTGAAGTACCTGCTGGATCGGCTGCACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR CCA 90 bp GGGGGCTCCTCGGGCGGAGAGGGCGAGCTGGACTGCTTGAGTTTCTaGCAGATCCTTGTGCCCGTTTTCTCCTCTTCGTGCAGCCGATCC +
Preference number: 1 (lower is better)
Translates to: GGSSGGEGELDCLSF*QILVPVFSSSCSRS
Trigger: GGATCGGCTGCACGAAGAGGAGAAAACGGGCACAAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGCCCTCTCCGCCCGAGGAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR CCA 90 bp CTCTGTGATGCAGTGTTTCCTTTGCCTCCGAGGACCCACCCTGCCTaGCCCCTGTGCACTGGTTGGTGGGGGCAACTCCCGGGCTGTGAT +
Preference number: 1 (lower is better)
Translates to: LCDAVFPLPPRTHPA*PLCTGWWGQLPGCD
Trigger: ATCACAGCCCGGGAGTTGCCCCCACCAACCAGTGCACAGGGGCCAGGCAGGGTGGGTCCTCGGAGGCAAAGGAAACACTGCATCACAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR CCA 90 bp CCTCATCCTTGTCTTCATCAAAGCCCCTCCCCCAGTGCGGAGATGTaGGGAGTGCAGAGATGTAGGCCGCCCTGCTCCGGGCCTCCTTCT +
Preference number: 1 (lower is better)
Translates to: PHPCLHQSPSPSAEM*GVQRCRPPCSGPPS
Trigger: AGAAGGAGGCCCGGAGCAGGGCGGCCTACATCTCTGCACTCCCCACATCTCCGCACTGGGGGAGGGGCTTTGATGAAGACAAGGATGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR GCA 90 bp GGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTaGTGTTGCAGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGG +
Preference number: 1 (lower is better)
Translates to: GATAVSGHFTQPAGG*CCSYKGQLLRGAHR
Trigger: CCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR GCA 90 bp GCCAGCTCGCTCTTCTGCGAAGTCCAGGCATCCTGCCCCAGCAGCTaGTTGATGCGGTCCTCATTGGGAACATGGAGGTCCTTGATGGCC +
Preference number: 1 (lower is better)
Translates to: ASSLFCEVQASCPSS*LMRSSLGTWRSLMA
Trigger: GGCCATCAAGGACCTCCATGTTCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGCAGGATGCCTGGACTTCGCAGAAGAGCGAGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR CCA 90 bp GAAGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTaGCTGCTGTTGCAGCTACAAAGGCCAACTGCTCAGAGGAGCCCA +
Preference number: 1 (lower is better)
Translates to: EGGYSSVRALHPTCR*LLLQLQRPTAQRSP
Trigger: TGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR GCA 90 bp ACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTaGAGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGGCTTCCT +
Preference number: 1 (lower is better)
Translates to: TAVSGHFTQPAGGCC*SYKGQLLRGAHRLP
Trigger: AGGAAGCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR TCA 90 bp GAGAATCTCTGTGTACCCTTCATCAGGCTGAGGACTAAGGTGCCATaGGCTGTACCATCCTTCCTCTTGGTAGGGCCTGCCTCCACAGCT +
Preference number: 1 (lower is better)
Translates to: ENLCVPFIRLRTKVP*AVPSFLLVGPASTA
Trigger: AGCTGTGGAGGCAGGCCCTACCAAGAGGAAGGATGGTACAGCTCATGGCACCTTAGTCCTCAGCCTGATGAAGGGTACACAGAGATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
3UTR CCA 90 bp CCTCCTTCTCCTGCTCCTGTAGGTAAAGGATGTTGTCTTTGGAAATaGCTTCCATCAAGTCCTTGTGCAGGGTGGGCTCTGTCCGGACTC +
Preference number: 1 (lower is better)
Translates to: PPSPAPVGKGCCLWK*LPSSPCAGWALSGL
Trigger: GAGTCCGGACAGAGCCCACCCTGCACAAGGACTTGATGGAAGCCATTTCCAAAGACAACATCCTTTACCTACAGGAGCAGGAGAAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR TCA 90 bp GCGTGTCTGTCTGCTGCTTTCACAGGTCACTTAGATGTGACATCTTaGGGGTCTGTGACATTGGGCCCAAACTCCACACCACCATCACAG +
Preference number: 1 (lower is better)
Translates to: ACLSAAFTGHLDVTS*GSVTLGPNSTPPSQ
Trigger: CTGTGATGGTGGTGTGGAGTTTGGGCCCAATGTCACAGACCCTCAAGATGTCACATCTAAGTGACCTGTGAAAGCAGCAGACAGACACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
3UTR-3UTR TCA 90 bp GCCCTCAGAGCCACATGTCCGCTCCCCGGAGGGGATGGCAGCATCCGGGTGGGTCGAGAGAGAGGTCCGTaGAGGCCTCCTCCCGGGAGG +
Preference number: 2 (lower is better)
Translates to: ALRATCPLPGGDGSIRVGRERGP*RPPPGR
Trigger: CCTCCCGGGAGGAGGCCTTCACGGACCTCTCTCTCG...ACCCACCCGGATGCTGCCATCCCCTCCGGGGAGCGGACATGTGGCTCTGAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR CCA 90 bp ACCAGGTCCAGGACGGAGCGGGAGCCCTCAGAGCCACATGTCCGCTCCCCGGAGATGGCAGCATCCGGGTaGGTCCCCGCTCCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: TRSRTEREPSEPHVRSPEMAASG*VPAPRL
Trigger: CAGCCTGGGAGCGGGGACCCACCCGGATGCTGCCAT...CTCCGGGGAGCGGACATGTGGCTCTGAGGGCTCCCGCTCCGTCCTGGACCTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR GCA 90 bp CGGGCTGTGATGTCTTCTGTGGGGCGCATCACAGAGCCCAGGCGGCGGCGGCGATACTCCGAGCAGTCCTaGTGGGTGCCAGGGCTGAAC +
Preference number: 2 (lower is better)
Translates to: RAVMSSVGRITEPRRRRRYSEQS*WVPGLN
Trigger: GTTCAGCCCTGGCACCCAGCAGGACTGCTCGGAGTA...TCGCCGCCGCCGCCTGGGCTCTGTGATGCGCCCCACAGAAGACATCACAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR GCA 90 bp CCAGTGCGGAGATGTGGGGAGTGCAGAGATGTAGGCCGCCCTGCTCCGGGCCTCGCCAGCTCGCTCTTCTaGGAAGTCCAGGCATCCTGC +
Preference number: 2 (lower is better)
Translates to: PVRRCGECRDVGRPAPGLASSLF*EVQASC
Trigger: GCAGGATGCCTGGACTTCGCAGAAGAGCGAGCTGGC...GAGGCCCGGAGCAGGGCGGCCTACATCTCTGCACTCCCCACATCTCCGCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR CAA 90 bp AGTGGCAGGCGGAGCAGCAGGGGGATGGAGACGTCATCCAGGATCTaGCGGCGCCGCATGGTGCGCAGGTCGAAAGAGAAGCGCAGCAGT +
Preference number: 2 (lower is better)
Translates to: SGRRSSRGMETSSRI*RRRMVRRSKEKRSS
Trigger: ACTGCTGCGCTTCTCTTTCGACCTGCGCACCATGCGGCGCCGCAAGATCCTGGATGACGTCTCCATCCCCCTGCTGCTCCGCCTGCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR TCA 90 bp AGGGAAGGCGAGAGAGAGGTCCGTGAAGGCCTCCTCCCGGGAGGAGACGTTGAGAATCTTGCCCGTGTCTaGCTTGGCCATGAGCCGGGG +
Preference number: 2 (lower is better)
Translates to: REGEREVREGLLPGGDVENLARV*LGHEPG
Trigger: CCCCGGCTCATGGCCAAGTCAGACACGGGCAAGATT...CTCAACGTCTCCTCCCGGGAGGAGGCCTTCACGGACCTCTCTCTCGCCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR CCA 90 bp TCTGCCCACCAGCTTCCTTGGAGTCCAGGCCTTCGATGTACAGGCTGGTGGGGGCGGAACACCATGCAGTaGACCAGCTCCGCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: SAHQLPWSPGLRCTGWWGRNTMQ*TSSASC
Trigger: GCAGCTGGCGGAGCTGGTCCACTGCATGGTGTTCCG...CCCCCACCAGCCTGTACATCGAAGGCCTGGACTCCAAGGAAGCTGGTGGGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR CCA 90 bp GACCACTCTCCGAAGACACTCCAGAGTGCACCACCACACTGCAGAGGTCATAGGGCTCCCCGGAGGGGATaGCAGCATCCGGGTGGGTCC +
Preference number: 2 (lower is better)
Translates to: DHSPKTLQSAPPHCRGHRAPRRG*QHPGGS
Trigger: GGACCCACCCGGATGCTGCCATCCCCTCCGGGGAGC...CCTATGACCTCTGCAGTGTGGTGGTGCACTCTGGAGTGTCTTCGGAGAGTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR TCA 90 bp AGGGAAGGCGAGAGAGAGGTCCGTGAAGGCCTCCTCCCGGGAGGAGACGTTGAGTGTCTGACTTGGCCATaGGCCGGGGATAGAAACCCG +
Preference number: 2 (lower is better)
Translates to: REGEREVREGLLPGGDVECLTWP*AGDRNP
Trigger: CGGGTTTCTATCCCCGGCTCATGGCCAAGTCAGACA...CTCAACGTCTCCTCCCGGGAGGAGGCCTTCACGGACCTCTCTCTCGCCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR GCA 90 bp GCCCTCAGAGCCACATGTCCGCTCCCCGGAGGGGATGGCAGCATCCGGGTGGGTTGTGCCCATCTCGGCTaGTTCAAGTTAACCAGGACA +
Preference number: 2 (lower is better)
Translates to: ALRATCPLPGGDGSIRVGCAHLG*FKLTRT
Trigger: TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA...ACCCACCCGGATGCTGCCATCCCCTCCGGGGAGCGGACATGTGGCTCTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR TCA 90 bp AGTCACCACCATTGCCACCTGCAGGATTGCAGCCCCCTGGAGAGCCTTCATCCTCCCGGGAGGAGACGTTaGGGCAGCAGAGACAGCAGA +
Preference number: 2 (lower is better)
Translates to: SHHHCHLQDCSPLESLHPPGRRR*GSRDSR
Trigger: TCTGCTGTCTCTGCTGCCTCAACGTCTCCTCCCGGG...AGGATGAAGGCTCTCCAGGGGGCTGCAATCCTGCAGGTGGCAATGGTGGTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR CAA 90 bp AGCTCGCTCTTCTGCGAAGTCCAGGCATCCTGCCCCAGCAGCTGCTaGATGCGGTCCTCATTGGGAACATGGAGGTCCTTGATGGCCTCC +
Preference number: 2 (lower is better)
Translates to: SSLFCEVQASCPSSC*MRSSLGTWRSLMAS
Trigger: GGAGGCCATCAAGGACCTCCATGTTCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGCAGGATGCCTGGACTTCGCAGAAGAGCGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR TCA 90 bp GAGCTGCCTCCCAGGTGCATCCTCTCCACGGGCAGCATCACCCAGCCCTCAGTAAGGACTAAGGTGCCATaGGCTGTACCATCCTTCCTC +
Preference number: 2 (lower is better)
Translates to: ELPPRCILSTGSITQPSVRTKVP*AVPSFL
Trigger: GAGGAAGGATGGTACAGCTCATGGCACCTTAGTCCT...TACTGAGGGCTGGGTGATGCTGCCCGTGGAGAGGATGCACCTGGGAGGCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529308.6
3UTR-3UTR TCA 90 bp GCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGACCAGTCGCAACTCCCGGGCTGTaGTGTCTTCTGTGGGGCGCA +
Preference number: 2 (lower is better)
Translates to: APGGKGSGWQQVHIRRPVATPGL*CLLWGA
Trigger: TGCGCCCCACAGAAGACATCACAGCCCGGGAGTTGC...GACTGGTCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR GCA 90 bp GCCAGGGCTGAACCAGGGCGTCCAGGATGCGGAGAGGAAGTTCTCTGGGGAAATTCCTGCCCCAGCAGCTaGTTGATGCGGTCCTCATTG +
Preference number: 2 (lower is better)
Translates to: ARAEPGRPGCGEEVLWGNSCPSS*LMRSSL
Trigger: CAATGAGGACCGCATCAAGCAGCTGCTGGGGCAGGA...ATTTCCCCAGAGAACTTCCTCTCCGCATCCTGGACGCCCTGGTTCAGCCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR GCA 90 bp GACCACTCTCCGAAGACACTCCAGAGTGCACCACCACACTGCAGAGGTCATAGGTGCGGCGCCGCATGGTaGGCAGGTCGAAAGAGAAGC +
Preference number: 2 (lower is better)
Translates to: DHSPKTLQSAPPHCRGHRCGAAW*AGRKRS
Trigger: GCTTCTCTTTCGACCTGCGCACCATGCGGCGCCGCA...CCTATGACCTCTGCAGTGTGGTGGTGCACTCTGGAGTGTCTTCGGAGAGTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR CCA 90 bp GGGCGAGCTGGACTGCTTGAGTTTCTGGCAGATCCTTGTGCCCGTTTTCTCCTCGCCCTACCTGGCTCCTaGAGGGAAGGGGTCAGGTTG +
Preference number: 2 (lower is better)
Translates to: GRAGLLEFLADPCARFLLALPGS*REGVRL
Trigger: CAACCTGACCCCTTCCCTCCAGGAGCCAGGTAGGGC...GAGGAGAAAACGGGCACAAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR CAA 90 bp TACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTaGCAGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: YSSVRALHPTCRWLL*QLQRPTAQRSPQAS
Trigger: GGAAGCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR-3UTR TCA 90 bp GCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAAAGGTGCCCCAGCAGCTGCTTaGTGCGGTCCTCATTGGGAA +
Preference number: 2 (lower is better)
Translates to: AVALGKGAGLGLCSSQKGAPAAA*CGPHWE
Trigger: TTCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGC...ACCTTTCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR GCA 90 bp GCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGACCAGTCCCAGGGCGTCCAGGATaGGGAGAGGAAGTTCTCTGG +
Preference number: 2 (lower is better)
Translates to: APGGKGSGWQQVHIRRPVPGRPG*GEEVLW
Trigger: CCAGAGAACTTCCTCTCCGCATCCTGGACGCCCTGG...GACTGGTCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR CCA 90 bp GAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTGCCCTACCTGGCTCCTaGAGGGAAGGGGTCAGGTTG +
Preference number: 2 (lower is better)
Translates to: EAKTRVCPSRLLQVNQDTALPGS*REGVRL
Trigger: CAACCTGACCCCTTCCCTCCAGGAGCCAGGTAGGGC...AGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
3UTR-3UTR TCA 90 bp GCCTCCATGACAGGCTCATACAGATCCGGGAAGCCCGGGAACCGGAACACCATGAGGACTAAGGTGCCATaGGCTGTACCATCCTTCCTC +
Preference number: 2 (lower is better)
Translates to: ASMTGSYRSGKPGNRNTMRTKVP*AVPSFL
Trigger: GAGGAAGGATGGTACAGCTCATGGCACCTTAGTCCT...CATGGTGTTCCGGTTCCCGGGCTTCCCGGATCTGTATGAGCCTGTCATGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR TCA 90 bp AGGGAAGGCGAGAGAGAGGTCCGTGAAGGCCTCCTCCCGGGAGGAGACGTTGAGTCAAAACATTGGAGCTaGGGTCTAGCCTGTTTCCTG +
Preference number: 2 (lower is better)
Translates to: REGEREVREGLLPGGDVESKHWS*GLACFL
Trigger: CAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGA...CTCAACGTCTCCTCCCGGGAGGAGGCCTTCACGGACCTCTCTCTCGCCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR TCA 90 bp GCCAGGGCTGAACCAGGGCGTCCAGGATGCGGAGAGGAAGTTCTCTGGGGAAATGCTACTCAGACGCCATaGATAAGGCCTGAAGGATGC +
Preference number: 2 (lower is better)
Translates to: ARAEPGRPGCGEEVLWGNATQTP*IRPEGC
Trigger: GCATCCTTCAGGCCTTATTCATGGCGTCTGAGTAGC...ATTTCCCCAGAGAACTTCCTCTCCGCATCCTGGACGCCCTGGTTCAGCCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR GCA 90 bp TACCTGGCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGAGGAACCGGAACACCATaGAGTGGACCAGCTCCGCCA +
Preference number: 2 (lower is better)
Translates to: YLAPGGKGSGWQQVHIRRGTGTP*SGPAPP
Trigger: TGGCGGAGCTGGTCCACTGCATGGTGTTCCGGTTCC...TCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGCCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR CCA 90 bp GCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGACCAGTCCCCAAAACCATGCAGTaGCGCTTGGTAAGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: APGGKGSGWQQVHIRRPVPKTMQ*RLVRGQ
Trigger: CTGCCCCCTTACCAAGCGCCACTGCATGGTTTTGGG...GACTGGTCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR TCA 90 bp TACCTGGCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGAAGTTCGAGTCCTCCTTaGCCAGAGAGGCCACCATGG +
Preference number: 2 (lower is better)
Translates to: YLAPGGKGSGWQQVHIRRSSSPP*PERPPW
Trigger: CCATGGTGGCCTCTCTGGTCAAGGAGGACTCGAACT...TCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGCCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR CCA 90 bp GTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTCCCTCAGGCCCTACCTaGCTCCTGGAGGGAAGGGGT +
Preference number: 2 (lower is better)
Translates to: VCAHLGCFKLTRTLGCKVPSGPT*LLEGRG
Trigger: ACCCCTTCCCTCCAGGAGCCAGGTAGGGCCTGAGGG...AACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
3UTR-3UTR CCA 90 bp GCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGACCAGTCAGTTCTCTGGGGAAATaGCAGGCCGCTGGCTGTGTT +
Preference number: 2 (lower is better)
Translates to: APGGKGSGWQQVHIRRPVSSLGK*QAAGCV
Trigger: AACACAGCCAGCGGCCTGCCATTTCCCCAGAGAACT...GACTGGTCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR TCA 90 bp CAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGAGGACTAAGGTGCCATaGGCTGTACCATCCTTCCTC +
Preference number: 2 (lower is better)
Translates to: QCQGTSPNLQVAAVAATKRTKVP*AVPSFL
Trigger: GAGGAAGGATGGTACAGCTCATGGCACCTTAGTCCT...CTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR-3UTR TCA 90 bp CTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTGGGACTGATCCCCAATaGAAGGGACTTAGGTCTTAC +
Preference number: 2 (lower is better)
Translates to: LQQCQGTSPNLQVAAVAAGTDPQ*KGLRSY
Trigger: GTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCC...AGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR-3UTR TCA 90 bp TACCTGGCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGAGGTCATCAGGGGCTGTaGGTTGTTCTCAGTCAAGCG +
Preference number: 2 (lower is better)
Translates to: YLAPGGKGSGWQQVHIRRGHQGL*VVLSQA
Trigger: CGCTTGACTGAGAACAACTCACAGCCCCTGATGACC...TCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGCCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR GCA 90 bp AAGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTGCTTGGATCCTGCTGTaGTTTATACCGTACAGCAGT +
Preference number: 2 (lower is better)
Translates to: KGATAVSGHFTQPAGGCCAWILL*FIPYSS
Trigger: ACTGCTGTACGGTATAAAGCACAGCAGGATCCAAGC...ACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR-3UTR GCA 90 bp TACCTGGCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGAAAGCCAAAGAGCCACTaGAGCTTGGTCATCAGGGGC +
Preference number: 2 (lower is better)
Translates to: YLAPGGKGSGWQQVHIRRKPKSH*SLVIRG
Trigger: GCCCCTGATGACCAAGCTGCAGTGGCTCTTTGGCTT...TCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGCCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR GCA 90 bp TACCTGGCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGATCCTTTCCTCCTGACTaGTCTGCCCACCAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: YLAPGGKGSGWQQVHIRRSFPPD*SAHQLP
Trigger: AGGAAGCTGGTGGGCAGAGCAGTCAGGAGGAAAGGA...TCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGCCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR GCA 90 bp GACCACTCTCCGAAGACACTCCAGAGTGCACCACCACACTGCAGAGGTCATAGGGTAGTAGCGGTTTTCTaGTGTCAGCTTCTCGGGGGA +
Preference number: 2 (lower is better)
Translates to: DHSPKTLQSAPPHCRGHRVVAVF*CQLLGG
Trigger: TCCCCCGAGAAGCTGACAGCAGAAAACCGCTACTAC...CCTATGACCTCTGCAGTGTGGTGGTGCACTCTGGAGTGTCTTCGGAGAGTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR GCA 90 bp GTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTCCTCTTGGTAGGGCCTaGCTCCACAGCTTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: VCAHLGCFKLTRTLGCKVPLGRA*LHSFPQ
Trigger: CTGAGGGAAGCTGTGGAGGCAGGCCCTACCAAGAGG...AACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
3UTR-3UTR GCA 90 bp CAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGTGTGCCCATCTCGGCTaGTTCAAGTTAACCAGGACA +
Preference number: 2 (lower is better)
Translates to: QCQGTSPNLQVAAVAATKCAHLG*FKLTRT
Trigger: TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA...CTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR-3UTR GCA 90 bp CACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGCCAACTGCTCAGAGGGCTTGGATCCTGCTGTaGTTTATACCGTACAGCAGT +
Preference number: 2 (lower is better)
Translates to: HPTCRWLLLQLQRPTAQRAWILL*FIPYSS
Trigger: ACTGCTGTACGGTATAAAGCACAGCAGGATCCAAGC...CCTCTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR CAA 90 bp ACGTTGCTGACAGATTCGAAGGAAGAGAAGGACACCCGAGTGTCATaGAACAGGTACCACTGGTTCTCGGGCTCTGGCCTATCGGCAGTT +
Preference number: 2 (lower is better)
Translates to: TLLTDSKEEKDTRVS*NRYHWFSGSGLSAV
Trigger: AACTGCCGATAGGCCAGAGCCCGAGAACCAGTGGTACCTGTTCAATGACACTCGGGTGTCCTTCTCTTCCTTCGAATCTGTCAGCAACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR TCA 90 bp AAGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTCTTACTTCCATATCTaGGAGAATCTCTGTGTACCC +
Preference number: 2 (lower is better)
Translates to: KGATAVSGHFTQPAGGCCSYFHI*ENLCVP
Trigger: GGGTACACAGAGATTCTCTCAGATATGGAAGTAAGA...ACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR-3UTR TCA 90 bp ACCATGCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGATCAAAACATTGGAGCTaGGGTCTAGCCTGTTTCCTG +
Preference number: 2 (lower is better)
Translates to: TMQWRLVRGQVSVSVLLRSKHWS*GLACFL
Trigger: CAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGA...TCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
3UTR-3UTR GCA 90 bp GCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGACCAGTCGCAAGGCTTGGATCCTaGTGTGCTTTATACCGTACA +
Preference number: 2 (lower is better)
Translates to: APGGKGSGWQQVHIRRPVARLGS*CALYRT
Trigger: TGTACGGTATAAAGCACAGCAGGATCCAAGCCTTGC...GACTGGTCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR GCA 90 bp TGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAGGGGCAAAGGCCTCCTaGTGTGAGAAGCTAGCCCCC +
Preference number: 2 (lower is better)
Translates to: CAHLGCFKLTRTLGCKVLGAKAS*CEKLAP
Trigger: GGGGGCTAGCTTCTCACAGCAGGAGGCCTTTGCCCC...TAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR-3UTR GCA 90 bp TGTCTGTCTTGTCTTCGGTTAGAAGTTAGAAGGGGGCTACAGCAGTGTCAGGGCCAACCTGCAGGTGGCTaGTGTTGCAGCTACAAAGGC +
Preference number: 2 (lower is better)
Translates to: CLSCLRLEVRRGLQQCQGQPAGG*CCSYKG
Trigger: GCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTG...GCCCTGACACTGCTGTAGCCCCCTTCTAACTTCTAACCGAAGACAAGACAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR-3UTR CCA 90 bp CACAAGGAACATGAACACCTTTGCAGTAAAATCAGGACTCTAACCACAAGGGGGGCCCTACCTGGCTCCTaGAGGGAAGGGGTCAGGTTG +
Preference number: 2 (lower is better)
Translates to: HKEHEHLCSKIRTLTTRGALPGS*REGVRL
Trigger: CAACCTGACCCCTTCCCTCCAGGAGCCAGGTAGGGC...CCCCCTTGTGGTTAGAGTCCTGATTTTACTGCAAAGGTGTTCATGTTCCTTGTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR CAA 90 bp GGCGTGTCTGTCTGCTGCTTTCACAGGTCACTTAGATGTGACATCTaGAGGGTCTGTGACATTGGGCCCAAACTCCACACCACCATCACA +
Preference number: 2 (lower is better)
Translates to: GVSVCCFHRSLRCDI*RVCDIGPKLHTTIT
Trigger: TGTGATGGTGGTGTGGAGTTTGGGCCCAATGTCACAGACCCTCAAGATGTCACATCTAAGTGACCTGTGAAAGCAGCAGACAGACACGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529308.6
3UTR-3UTR GCA 90 bp TGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTACCTCTTGGTAGGGCCTaGCTCCACAGCTTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: CAHLGCFKLTRTLGCKVLPLGRA*LHSFPQ
Trigger: CTGAGGGAAGCTGTGGAGGCAGGCCCTACCAAGAGG...TAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
3UTR-3UTR GCA 90 bp TTGTGCAAGGCTTGGATCCTGCTGTGCTTTATACCGTACAGCAGTCGGAAGGAAGCAAAGACCCGTGTGTaGCCATCTCGGCTGCTTCAA +
Preference number: 2 (lower is better)
Translates to: LCKAWILLCFIPYSSRKEAKTRV*PSRLLQ
Trigger: TTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGC...TTCCTTCCGACTGCTGTACGGTATAAAGCACAGCAGGATCCAAGCCTTGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
3UTR-3UTR CCA 90 bp CAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGCCTTTGTGCAAGGCTTaGATCCTGCTGTGCTTTATA +
Preference number: 2 (lower is better)
Translates to: QCQGTSPNLQVAAVAATKPLCKA*ILLCFI
Trigger: TATAAAGCACAGCAGGATCCAAGCCTTGCACAAAGG...CTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR-3UTR TCA 90 bp GCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAAAGGTTCTTACTTCCATATCTaGGAGAATCTCTGTGTACCC +
Preference number: 2 (lower is better)
Translates to: AVALGKGAGLGLCSSQKGSYFHI*ENLCVP
Trigger: GGGTACACAGAGATTCTCTCAGATATGGAAGTAAGA...ACCTTTCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
3UTR-3UTR TCA 90 bp TGTCTGTCTTGTCTTCGGTTAGAAGTTAGAAGGGGGCTACAGCAGTGTCAGGGCGGGACTGATCCCCAATaGAAGGGACTTAGGTCTTAC +
Preference number: 2 (lower is better)
Translates to: CLSCLRLEVRRGLQQCQGGTDPQ*KGLRSY
Trigger: GTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCC...GCCCTGACACTGCTGTAGCCCCCTTCTAACTTCTAACCGAAGACAAGACAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR-3UTR GCA 90 bp GACGTTGAGGCAGCAGAGACAGCAGATCCGAGTCACTATCTTGCCTCCAAACATTCTGGCAGATCCTTGTaGCCGTTTTCTCCTCTTCGT +
Preference number: 2 (lower is better)
Translates to: DVEAAETADPSHYLASKHSGRSL*PFSPLR
Trigger: ACGAAGAGGAGAAAACGGGCACAAGGATCTGCCAGA...ATGTTTGGAGGCAAGATAGTGACTCGGATCTGCTGTCTCTGCTGCCTCAACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGCCCTACCTGGCTCCTaGAGGGAAGGGGTCAGGTTG +
Preference number: 2 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTALPGS*REGVRL
Trigger: CAACCTGACCCCTTCCCTCCAGGAGCCAGGTAGGGC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
3UTR-3UTR CCA 90 bp CACCCAGCCCTCAGTAAGGTAAGTAAGTCAGTCAGTCCACACGTTTACTTACACCACCCAACCTGCAGGTaGCTGCTGTTGCAGCTACAA +
Preference number: 2 (lower is better)
Translates to: HPALSKVSKSVSPHVYLHHPTCR*LLLQLQ
Trigger: TTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTG...GTGTAAGTAAACGTGTGGACTGACTGACTTACTTACCTTACTGAGGGCTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529308.6
3UTR-3UTR CCA 90 bp GTACTTGATGTCAAAACATTGGAGCTGAGGTCTAGCCTGTTTCCTGAACATCATGCTGCTCCAGGCAGCTaGTCCCCGAGTTCGAGTCCT +
Preference number: 2 (lower is better)
Translates to: VLDVKTLELRSSLFPEHHAAPGS*SPSSSP
Trigger: AGGACTCGAACTCGGGGACCAGCTGCCTGGAGCAGC...ATGATGTTCAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR TCA 90 bp TTGTGCAAGGCTTGGATCCTGCTGTGCTTTATACCGTACAGCAGTCGGAAGGAAGGGACTGATCCCCAATaGAAGGGACTTAGGTCTTAC +
Preference number: 2 (lower is better)
Translates to: LCKAWILLCFIPYSSRKEGTDPQ*KGLRSY
Trigger: GTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCC...TTCCTTCCGACTGCTGTACGGTATAAAGCACAGCAGGATCCAAGCCTTGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
3UTR-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCCTCTTGGTAGGGCCTaGCTCCACAGCTTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTPLGRA*LHSFPQ
Trigger: CTGAGGGAAGCTGTGGAGGCAGGCCCTACCAAGAGG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
3UTR-3UTR GCA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATAGATGTAGGCCGCCCTaGTCCGGGCCTCCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNRCRPP*SGPPSP
Trigger: AGGAGAAGGAGGCCCGGAGCAGGGCGGCCTACATCT...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR CCA 90 bp TGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAGGGAAGGGGTCAGGTTaGCAGCAGGTTCACATTAGA +
Preference number: 2 (lower is better)
Translates to: CAHLGCFKLTRTLGCKVLGKGSG*QQVHIR
Trigger: TCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCC...TAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGCAGGTGGCTGCTGTTaGAGCTACAAAGGCCAACTG +
Preference number: 2 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTAGGCC*SYKGQL
Trigger: CAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR-3UTR TCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTAGGACTAAGGTGCCATaGGCTGTACCATCCTTCCTC +
Preference number: 2 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTRTKVP*AVPSFL
Trigger: GAGGAAGGATGGTACAGCTCATGGCACCTTAGTCCT...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
3UTR-3UTR TCA 90 bp GTACTTGATGTCAAAACATTGGAGCTGAGGTCTAGCCTGTTTCCTGAACATCATTACCCTTCATCAGGCTaGGGACTAAGGTGCCATGAG +
Preference number: 2 (lower is better)
Translates to: VLDVKTLELRSSLFPEHHYPSSG*GLRCHE
Trigger: CTCATGGCACCTTAGTCCTCAGCCTGATGAAGGGTA...ATGATGTTCAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
3UTR-3UTR GCA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATGCAAAGACCCGTGTGTaGCCATCTCGGCTGCTTCAA +
Preference number: 2 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNAKTRV*PSRLLQ
Trigger: TTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGC...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
3UTR-3UTR TCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGGGACTGATCCCCAATaGAAGGGACTTAGGTCTTAC +
Preference number: 2 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTGTDPQ*KGLRSY
Trigger: GTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
3UTR-3UTR TCA 90 bp GTACTTGATGTCAAAACATTGGAGCTGAGGTCTAGCCTGTTTCCTGAACATCATCCTGAAGGATGCTGTTaGCATAGCATGTGTTGCCCA +
Preference number: 2 (lower is better)
Translates to: VLDVKTLELRSSLFPEHHPEGCC*HSMCCP
Trigger: TGGGCAACACATGCTATGTCAACAGCATCCTTCAGG...ATGATGTTCAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR TCA 90 bp GTACTTGATGTCAAAACATTGGAGCTGAGGTCTAGCCTGTTTCCTGAACATCATTTAGATGTGACATCTTaGGGGTCTGTGACATTGGGC +
Preference number: 2 (lower is better)
Translates to: VLDVKTLELRSSLFPEHHLDVTS*GSVTLG
Trigger: GCCCAATGTCACAGACCCTCAAGATGTCACATCTAA...ATGATGTTCAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529308.6
3UTR CAA 90 bp TACCGTACAGCAGTCGGAAGGAAAATAGTACTTGATGTCAAAACATaGGAGCTGAGGTCTAGCCTGTTTCCTGAACATCATCAGATCTTC +
Preference number: 2 (lower is better)
Translates to: YRTAVGRKIVLDVKT*ELRSSLFPEHHQIF
Trigger: GAAGATCTGATGATGTTCAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAGTACTATTTTCCTTCCGACTGCTGTACGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
3UTR-3UTR TCA 90 bp AGGCTTCCTAAGAGCCCACACTTCACAAGGAACATGAACACCTTTGCAGTAAAATCTTACTTCCATATCTaGGAGAATCTCTGTGTACCC +
Preference number: 2 (lower is better)
Translates to: RLPKSPHFTRNMNTFAVKSYFHI*ENLCVP
Trigger: GGGTACACAGAGATTCTCTCAGATATGGAAGTAAGA...TTTTACTGCAAAGGTGTTCATGTTCCTTGTGAAGTGTGGGCTCTTAGGAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR-3UTR TCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTCTTACTTCCATATCTaGGAGAATCTCTGTGTACCC +
Preference number: 2 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTSYFHI*ENLCVP
Trigger: GGGTACACAGAGATTCTCTCAGATATGGAAGTAAGA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
3UTR-3UTR GCA 90 bp GTACTTGATGTCAAAACATTGGAGCTGAGGTCTAGCCTGTTTCCTGAACATCATGAACATGAACACCTTTaGAGTAAAATCAGGACTCTA +
Preference number: 2 (lower is better)
Translates to: VLDVKTLELRSSLFPEHHEHEHL*SKIRTL
Trigger: TAGAGTCCTGATTTTACTGCAAAGGTGTTCATGTTC...ATGATGTTCAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR-3UTR GCA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAACATGAACACCTTTaGAGTAAAATCAGGACTCTA +
Preference number: 2 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNEHEHL*SKIRTL
Trigger: TAGAGTCCTGATTTTACTGCAAAGGTGTTCATGTTC...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR-3UTR CAA 90 bp GCCCTCAGAGCCACATGTCCGCTCCCCGGAGGGGATGGCAGCATCCGGGTGGGTGAGTTCGAGTCCTCCTaGACCAGAGAGGCCACCATG +
Preference number: 3 (lower is better)
Translates to: ALRATCPLPGGDGSIRVGEFESS*TREATM
Trigger: CATGGTGGCCTCTCTGGTCAAGGAGGACTCGAACTC...ACCCACCCGGATGCTGCCATCCCCTCCGGGGAGCGGACATGTGGCTCTGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR TCA 72 bp CCTGTGCACTGGTTGGTGGGGGCAACTCCCGGGCTGTaGTGTCTTCTGTGGGGCGCATCACAGAGCCCAGGC +
Preference number: 3 (lower is better)
Translates to: PVHWLVGATPGL*CLLWGASQSPG
Trigger: GCCTGGGCTCTGTGATGCGCCCCACAGAAGACATCACAGCCCGGGAGTTGCCCCCACCAACCAGTGCACAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR GCA 72 bp CATACAGATCCGGGAAGCCCGGGAACCGGAACACCATaGAGTGGACCAGCTCCGCCAGCTGCTCCAGGCAGC +
Preference number: 3 (lower is better)
Translates to: HTDPGSPGTGTP*SGPAPPAAPGS
Trigger: GCTGCCTGGAGCAGCTGGCGGAGCTGGTCCACTGCATGGTGTTCCGGTTCCCGGGCTTCCCGGATCTGTATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR GCA 72 bp GCCGGGGGCTCCTCGGGCGGAGAGGGCGAGCTGGACTaGTTGAGTTTCTGGCAGATCCTTGTGCCCGTTTTC +
Preference number: 3 (lower is better)
Translates to: AGGSSGGEGELD*LSFWQILVPVF
Trigger: GAAAACGGGCACAAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGCCCTCTCCGCCCGAGGAGCCCCCGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR CAA 90 bp CCAGTGCGGAGATGTGGGGAGTGCAGAGATGTAGGCCGCCCTGCTCCGGGCCTCGGAACATGGAGGTCCTaGATGGCCTCCATGACAGGC +
Preference number: 3 (lower is better)
Translates to: PVRRCGECRDVGRPAPGLGTWRS*MASMTG
Trigger: GCCTGTCATGGAGGCCATCAAGGACCTCCATGTTCC...GAGGCCCGGAGCAGGGCGGCCTACATCTCTGCACTCCCCACATCTCCGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR GCA 72 bp CCCGCCAGCTCGCTCTTCTGCGAAGTCCAGGCATCCTaGCCCAGCAGCTGCTTGATGCGGTCCTCATTGGGA +
Preference number: 3 (lower is better)
Translates to: PASSLFCEVQAS*PSSCLMRSSLG
Trigger: TCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGCAGGATGCCTGGACTTCGCAGAAGAGCGAGCTGGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR GCA 72 bp GGAGCAGCAGGGGGATGGAGACGTCATCCAGGATCTTaGGGCGCCGCATGGTGCGCAGGTCGAAAGAGAAGC +
Preference number: 3 (lower is better)
Translates to: GAAGGWRRHPGS*GAAWCAGRKRS
Trigger: GCTTCTCTTTCGACCTGCGCACCATGCGGCGCCGCAAGATCCTGGATGACGTCTCCATCCCCCTGCTGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR CCA 72 bp TGTCTTCATCAAAGCCCCTCCCCCAGTGCGGAGATGTaGGGAGTGCAGAGATGTAGGCCGCCCTGCTCCGGG +
Preference number: 3 (lower is better)
Translates to: CLHQSPSPSAEM*GVQRCRPPCSG
Trigger: CCCGGAGCAGGGCGGCCTACATCTCTGCACTCCCCACATCTCCGCACTGGGGGAGGGGCTTTGATGAAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR CAA 90 bp GAGCTGCCTCCCAGGTGCATCCTCTCCACGGGCAGCATCACCCAGCCCTCAGTAGTACCATCCTTCCTCTaGGTAGGGCCTGCCTCCACA +
Preference number: 3 (lower is better)
Translates to: ELPPRCILSTGSITQPSVVPSFL*VGPAST
Trigger: TGTGGAGGCAGGCCCTACCAAGAGGAAGGATGGTAC...TACTGAGGGCTGGGTGATGCTGCCCGTGGAGAGGATGCACCTGGGAGGCAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529308.6
3UTR-3UTR CAA 90 bp TTTCCACAGAGGTTGAACTTGGGGCCGGGGGCTCCTCGGGCGGAGAGGGCGAGCTTGATGAGACCAATCTaGCCCGTGTCTGACTTGGCC +
Preference number: 3 (lower is better)
Translates to: FPQRLNLGPGAPRAERASLMRPI*PVSDLA
Trigger: GGCCAAGTCAGACACGGGCAAGATTGGTCTCATCAA...GCTCGCCCTCTCCGCCCGAGGAGCCCCCGGCCCCAAGTTCAACCTCTGTGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR CAA 90 bp CCAGTGCGGAGATGTGGGGAGTGCAGAGATGTAGGCCGCCCTGCTCCGGGCCTCCATGTGTTGCCCAGGTaGATGAGACCAATCTTGCCC +
Preference number: 3 (lower is better)
Translates to: PVRRCGECRDVGRPAPGLHVLPR*MRPILP
Trigger: GGGCAAGATTGGTCTCATCAACCTGGGCAACACATG...GAGGCCCGGAGCAGGGCGGCCTACATCTCTGCACTCCCCACATCTCCGCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR TCA 72 bp GGGGCTCCTCGGGCGGAGAGGGCGAGCTGGACTGCTTaGGTTTCTGGCAGATCCTTGTGCCCGTTTTCTCCT +
Preference number: 3 (lower is better)
Translates to: GAPRAERASWTA*VSGRSLCPFSP
Trigger: AGGAGAAAACGGGCACAAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGCCCTCTCCGCCCGAGGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR CAA 90 bp CACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGCCAACTGCTCAGAGGACCATGCAGTGGCGCTaGGTAAGGGGGCAGGTCTCG +
Preference number: 3 (lower is better)
Translates to: HPTCRWLLLQLQRPTAQRTMQWR*VRGQVS
Trigger: CGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT...CCTCTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR GCA 72 bp CGATCCAGCAGGTACTTCAGATACTCCGAGCAGTCCTaGTGGGTGCCAGGGCTGAACCAGGGCGTCCAGGAT +
Preference number: 3 (lower is better)
Translates to: RSSRYFRYSEQS*WVPGLNQGVQD
Trigger: ATCCTGGACGCCCTGGTTCAGCCCTGGCACCCAGCAGGACTGCTCGGAGTATCTGAAGTACCTGCTGGATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR CAA 90 bp GCCTCCATGACAGGCTCATACAGATCCGGGAAGCCCGGGAACCGGAACACCATGGTACCATCCTTCCTCTaGGTAGGGCCTGCCTCCACA +
Preference number: 3 (lower is better)
Translates to: ASMTGSYRSGKPGNRNTMVPSFL*VGPAST
Trigger: TGTGGAGGCAGGCCCTACCAAGAGGAAGGATGGTAC...CATGGTGTTCCGGTTCCCGGGCTTCCCGGATCTGTATGAGCCTGTCATGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR CAA 90 bp GCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAAAGGTACCATGCAGTGGCGCTaGGTAAGGGGGCAGGTCTCG +
Preference number: 3 (lower is better)
Translates to: AVALGKGAGLGLCSSQKGTMQWR*VRGQVS
Trigger: CGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT...ACCTTTCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
3UTR-3UTR CAA 90 bp AGTCACCACCATTGCCACCTGCAGGATTGCAGCCCCCTGGAGAGCCTTCATCCTTGCCCCAGCAGCTGCTaGATGCGGTCCTCATTGGGA +
Preference number: 3 (lower is better)
Translates to: SHHHCHLQDCSPLESLHPCPSSC*MRSSLG
Trigger: TCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGCA...AGGATGAAGGCTCTCCAGGGGGCTGCAATCCTGCAGGTGGCAATGGTGGTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR GCA 72 bp CTCTTCTGCGAAGTCCAGGCATCCTGCCCCAGCAGCTaGTTGATGCGGTCCTCATTGGGAACATGGAGGTCC +
Preference number: 3 (lower is better)
Translates to: LFCEVQASCPSS*LMRSSLGTWRS
Trigger: GGACCTCCATGTTCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGCAGGATGCCTGGACTTCGCAGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR CCA 72 bp TCGGGCGGAGAGGGCGAGCTGGACTGCTTGAGTTTCTaGCAGATCCTTGTGCCCGTTTTCTCCTCTTCGTGC +
Preference number: 3 (lower is better)
Translates to: SGGEGELDCLSF*QILVPVFSSSC
Trigger: GCACGAAGAGGAGAAAACGGGCACAAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGCCCTCTCCGCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR CAA 90 bp AGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGGCTTCCTAAGAGCCCACACGTACCATCCTTCCTCTaGGTAGGGCCTGCCTCCACA +
Preference number: 3 (lower is better)
Translates to: SYKGQLLRGAHRLPKSPHVPSFL*VGPAST
Trigger: TGTGGAGGCAGGCCCTACCAAGAGGAAGGATGGTAC...GTGTGGGCTCTTAGGAAGCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR-3UTR CAA 90 bp AGGTCTAGCCTGTTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTACCATGCAGTGGCGCTaGGTAAGGGGGCAGGTCTCG +
Preference number: 3 (lower is better)
Translates to: RSSLFPEHHQIFPHGEPATMQWR*VRGQVS
Trigger: CGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT...AGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAACAGGCTAGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
3UTR-3UTR CAA 90 bp ACCATGCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAAAGAGCCACTGCAGCTaGGTCATCAGGGGCTGTGAG +
Preference number: 3 (lower is better)
Translates to: TMQWRLVRGQVSVSVLLRKSHCS*VIRGCE
Trigger: CTCACAGCCCCTGATGACCAAGCTGCAGTGGCTCTT...TCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR TCA 72 bp GTTGCCCAGGTTGATGAGACCAATCTTGCCCGTGTCTaGCTTGGCCATGAGCCGGGGATAGAAACCCGCCAG +
Preference number: 3 (lower is better)
Translates to: VAQVDETNLARV*LGHEPGIETRQ
Trigger: CTGGCGGGTTTCTATCCCCGGCTCATGGCCAAGTCAGACACGGGCAAGATTGGTCTCATCAACCTGGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR GCA 72 bp CTGCTAGGGAAGGAGGGGGAGGCAAAGACCCGTGTGTaGCCATCTCGGCTGCTTCAAGTTAACCAGGACACT +
Preference number: 3 (lower is better)
Translates to: LLGKEGEAKTRV*PSRLLQVNQDT
Trigger: AGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCCCCTCCTTCCCTAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
3UTR GCA 72 bp GCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTaGTGTTGCAGCTACAAAGGCCAACTGCTCAGAGGA +
Preference number: 3 (lower is better)
Translates to: AVSGHFTQPAGG*CCSYKGQLLRG
Trigger: TCCTCTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR CCA 72 bp TACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTaGCTGCTGTTGCAGCTACAAAGGCCAACTGCTCAG +
Preference number: 3 (lower is better)
Translates to: YSSVRALHPTCR*LLLQLQRPTAQ
Trigger: CTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR CCA 72 bp GAGAAGGACACCCGAGTGTCATTGAACAGGTACCACTaGTTCTCGGGCTCTGGCCTATCGGCAGTTCCCAGA +
Preference number: 3 (lower is better)
Translates to: EKDTRVSLNRYH*FSGSGLSAVPR
Trigger: TCTGGGAACTGCCGATAGGCCAGAGCCCGAGAACCAGTGGTACCTGTTCAATGACACTCGGGTGTCCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR TCA 72 bp TGTGTACCCTTCATCAGGCTGAGGACTAAGGTGCCATaGGCTGTACCATCCTTCCTCTTGGTAGGGCCTGCC +
Preference number: 3 (lower is better)
Translates to: CVPFIRLRTKVP*AVPSFLLVGPA
Trigger: GGCAGGCCCTACCAAGAGGAAGGATGGTACAGCTCATGGCACCTTAGTCCTCAGCCTGATGAAGGGTACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
3UTR GCA 72 bp AGGGGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTaGTTCAAGTTAACCAGGACACTTGGGTGTAAAGTT +
Preference number: 3 (lower is better)
Translates to: RGRQRPVCAHLG*FKLTRTLGCKV
Trigger: AACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
3UTR-3UTR CAA 90 bp TACCTGGCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGAGTTTCTGGCAGATCCTaGTGCCCGTTTTCTCCTCTT +
Preference number: 3 (lower is better)
Translates to: YLAPGGKGSGWQQVHIRRVSGRS*CPFSPL
Trigger: AAGAGGAGAAAACGGGCACAAGGATCTGCCAGAAAC...TCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGCCAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR CAA 90 bp TGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTATTGCCACCTGCAGGATaGCAGCCCCCTGGAGAGCCT +
Preference number: 3 (lower is better)
Translates to: CAHLGCFKLTRTLGCKVLLPPAG*QPPGEP
Trigger: AGGCTCTCCAGGGGGCTGCAATCCTGCAGGTGGCAA...TAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR TCA 72 bp CAGATTCGAAGGAAGAGAAGGACACCCGAGTGTCATTaGACAGGTACCACTGGTTCTCGGGCTCTGGCCTAT +
Preference number: 3 (lower is better)
Translates to: QIRRKRRTPECH*TGTTGSRALAY
Trigger: ATAGGCCAGAGCCCGAGAACCAGTGGTACCTGTTCAATGACACTCGGGTGTCCTTCTCTTCCTTCGAATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR CAA 90 bp TCACTTAGATGTGACATCTTGAGGGTCTGTGACATTGGGCCCAAACTCCACACCTTCAGTAGAGGGCTCTaGGCTCCCTGTGGCATCTCA +
Preference number: 3 (lower is better)
Translates to: SLRCDILRVCDIGPKLHTFSRGL*APCGIS
Trigger: TGAGATGCCACAGGGAGCCAAGAGCCCTCTACTGAA...GGTGTGGAGTTTGGGCCCAATGTCACAGACCCTCAAGATGTCACATCTAAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529308.6
3UTR-3UTR CAA 90 bp CACCCAGCCCTCAGTAAGGTAAGTAAGTCAGTCAGTCCACACGTTTACTTACACTGCAGGTGGCTGCTGTaGCAGCTACAAAGGCCAACT +
Preference number: 3 (lower is better)
Translates to: HPALSKVSKSVSPHVYLHCRWLL*QLQRPT
Trigger: AGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCA...GTGTAAGTAAACGTGTGGACTGACTGACTTACTTACCTTACTGAGGGCTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529308.6
3UTR-3UTR CAA 90 bp TGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAGGCGAGCTGGACTGCTaGAGTTTCTGGCAGATCCTT +
Preference number: 3 (lower is better)
Translates to: CAHLGCFKLTRTLGCKVLGELDC*SFWQIL
Trigger: AAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGCC...TAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR TCA 72 bp TCTGCTGCTTTCACAGGTCACTTAGATGTGACATCTTaGGGGTCTGTGACATTGGGCCCAAACTCCACACCA +
Preference number: 3 (lower is better)
Translates to: SAAFTGHLDVTS*GSVTLGPNSTP
Trigger: TGGTGTGGAGTTTGGGCCCAATGTCACAGACCCTCAAGATGTCACATCTAAGTGACCTGTGAAAGCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
3UTR CCA 72 bp CCTTCTCCTGCTCCTGTAGGTAAAGGATGTTGTCTTTaGAAATGGCTTCCATCAAGTCCTTGTGCAGGGTGG +
Preference number: 3 (lower is better)
Translates to: PSPAPVGKGCCL*KWLPSSPCAGW
Trigger: CCACCCTGCACAAGGACTTGATGGAAGCCATTTCCAAAGACAACATCCTTTACCTACAGGAGCAGGAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGTACCATCCTTCCTCTaGGTAGGGCCTGCCTCCACA +
Preference number: 3 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTVPSFL*VGPAST
Trigger: TGTGGAGGCAGGCCCTACCAAGAGGAAGGATGGTAC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
3UTR-3UTR CAA 90 bp AGGCTTCCTAAGAGCCCACACTTCACAAGGAACATGAACACCTTTGCAGTAAAACTTGATGTCAAAACATaGGAGCTGAGGTCTAGCCTG +
Preference number: 3 (lower is better)
Translates to: RLPKSPHFTRNMNTFAVKLDVKT*ELRSSL
Trigger: CAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAG...TTTTACTGCAAAGGTGTTCATGTTCCTTGTGAAGTGTGGGCTCTTAGGAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp TTTCCACAGAGGTTGAACTTGGGGCCGGGGGCTCCTCGGGCGGAGAGGGCGAGCGATGGCGGCGGGCTGTaGGCGCCACAGCTGCGCCAG +
Preference number: 4 (lower is better)
Translates to: FPQRLNLGPGAPRAERASDGGGL*APQLRQ
Trigger: CTGGCGCAGCTGTGGCGCGCACAGCCCGCCGCCATC...GCTCGCCCTCTCCGCCCGAGGAGCCCCCGGCCCCAAGTTCAACCTCTGTGGAAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR TCA 90 bp GCCCTCAGAGCCACATGTCCGCTCCCCGGAGGGGATGGCAGCATCCGGGTGGGTGCTGGGTGCCAGGGCTaGACCAGGGCGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: ALRATCPLPGGDGSIRVGAGCQG*TRASRM
Trigger: CATCCTGGACGCCCTGGTTCAGCCCTGGCACCCAGC...ACCCACCCGGATGCTGCCATCCCCTCCGGGGAGCGGACATGTGGCTCTGAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp GCCCTCAGAGCCACATGTCCGCTCCCCGGAGGGGATGGCAGCATCCGGGTGGGTAGATGTAGGCCGCCCTaGTCCGGGCCTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ALRATCPLPGGDGSIRVGRCRPP*SGPPSP
Trigger: AGGAGAAGGAGGCCCGGAGCAGGGCGGCCTACATCT...ACCCACCCGGATGCTGCCATCCCCTCCGGGGAGCGGACATGTGGCTCTGAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp TTTCCACAGAGGTTGAACTTGGGGCCGGGGGCTCCTCGGGCGGAGAGGGCGAGCCCCTCAGGCCCTACCTaGCTCCTGGAGGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: FPQRLNLGPGAPRAERASPSGPT*LLEGRG
Trigger: ACCCCTTCCCTCCAGGAGCCAGGTAGGGCCTGAGGG...GCTCGCCCTCTCCGCCCGAGGAGCCCCCGGCCCCAAGTTCAACCTCTGTGGAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR TCA 90 bp TTTCCACAGAGGTTGAACTTGGGGCCGGGGGCTCCTCGGGCGGAGAGGGCGAGCCTGCGAACAGCTCTTTaGGGCAGGGCAGGATGGCGG +
Preference number: 4 (lower is better)
Translates to: FPQRLNLGPGAPRAERASLRTAL*GRAGWR
Trigger: CCGCCATCCTGCCCTGCCTCAAAGAGCTGTTCGCAG...GCTCGCCCTCTCCGCCCGAGGAGCCCCCGGCCCCAAGTTCAACCTCTGTGGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp GACATTGGGCCCAAACTCCACACCACCATCACAGCAGGCAGCCCCTGGGGAAGGTGTGCGCGCCACAGCTaGGCCAGGAGCCCGCTCACC +
Preference number: 4 (lower is better)
Translates to: DIGPKLHTTITAGSPWGRCARHS*ARSPLT
Trigger: GGTGAGCGGGCTCCTGGCGCAGCTGTGGCGCGCACA...CCTTCCCCAGGGGCTGCCTGCTGTGATGGTGGTGTGGAGTTTGGGCCCAATGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CCA 90 bp GACATTGGGCCCAAACTCCACACCACCATCACAGCAGGCAGCCCCTGGGGAAGGAAGACGTCGGGGTGGTaGCGGCCGGCCACGTGCAGC +
Preference number: 4 (lower is better)
Translates to: DIGPKLHTTITAGSPWGRKTSGW*RPATCS
Trigger: GCTGCACGTGGCCGGCCGCCACCACCCCGACGTCTT...CCTTCCCCAGGGGCTGCCTGCTGTGATGGTGGTGTGGAGTTTGGGCCCAATGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp AAGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTAGCTGCAGACCCAGCTaGACGCAGGCGAGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: KGATAVSGHFTQPAGGCCSCRPS*TQASAR
Trigger: CCGCGCGCTCGCCTGCGTGCAGCTGGGTCTGCAGCT...ACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp GCCAGGGCTGAACCAGGGCGTCCAGGATGCGGAGAGGAAGTTCTCTGGGGAAATTGTGCGCGCCACAGCTaGGCCAGGAGCCCGCTCACC +
Preference number: 4 (lower is better)
Translates to: ARAEPGRPGCGEEVLWGNCARHS*ARSPLT
Trigger: GGTGAGCGGGCTCCTGGCGCAGCTGTGGCGCGCACA...ATTTCCCCAGAGAACTTCCTCTCCGCATCCTGGACGCCCTGGTTCAGCCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp GCCCTCAGAGCCACATGTCCGCTCCCCGGAGGGGATGGCAGCATCCGGGTGGGTAGGTGGAAGGCTTCGTaGGAGTGCTGGAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ALRATCPLPGGDGSIRVGRWKAS*ECWKVR
Trigger: CCTGACCTTCCAGCACTCCCACGAAGCCTTCCACCT...ACCCACCCGGATGCTGCCATCCCCTCCGGGGAGCGGACATGTGGCTCTGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp CCAGAGAAGCGGCAGGGCGGGCAGCGCCCTCACGGGCATAGCAGTAGTAGTGACCGGAACACCATGCAGTaGACCAGCTCCGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PEKRQGGQRPHGHSSSSDRNTMQ*TSSASC
Trigger: GCAGCTGGCGGAGCTGGTCCACTGCATGGTGTTCCG...GTCACTACTACTGCTATGCCCGTGAGGGCGCTGCCCGCCCTGCCGCTTCTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp ACCAGGTCCAGGACGGAGCGGGAGCCCTCAGAGCCACATGTCCGCTCCCCGGAGGGAGAGGAAGTTCTCTaGGGAAATGGCAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: TRSRTEREPSEPHVRSPEGEEVL*GNGRPL
Trigger: CAGCGGCCTGCCATTTCCCCAGAGAACTTCCTCTCC...CTCCGGGGAGCGGACATGTGGCTCTGAGGGCTCCCGCTCCGTCCTGGACCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp CCAGAGAAGCGGCAGGGCGGGCAGCGCCCTCACGGGCATAGCAGTAGTAGTGACCTGTGCACTGGTTGGTaGGGGCAACTCCCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PEKRQGGQRPHGHSSSSDLCTGW*GQLPGC
Trigger: ACAGCCCGGGAGTTGCCCCCACCAACCAGTGCACAG...GTCACTACTACTGCTATGCCCGTGAGGGCGCTGCCCGCCCTGCCGCTTCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp GCCCTCAGAGCCACATGTCCGCTCCCCGGAGGGGATGGCAGCATCCGGGTGGGTCCCAGTGCGGAGATGTaGGGAGTGCAGAGATGTAGG +
Preference number: 4 (lower is better)
Translates to: ALRATCPLPGGDGSIRVGPSAEM*GVQRCR
Trigger: CCTACATCTCTGCACTCCCCACATCTCCGCACTGGG...ACCCACCCGGATGCTGCCATCCCCTCCGGGGAGCGGACATGTGGCTCTGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp AGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGGCTTCCTAAGAGCCCACACGATGGCGGCGGGCTGTaGGCGCCACAGCTGCGCCAG +
Preference number: 4 (lower is better)
Translates to: SYKGQLLRGAHRLPKSPHDGGGL*APQLRQ
Trigger: CTGGCGCAGCTGTGGCGCGCACAGCCCGCCGCCATC...GTGTGGGCTCTTAGGAAGCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp GGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGTCCGAGGACCCACCCTaGCTGGCCCCTGTGCACTGG +
Preference number: 4 (lower is better)
Translates to: GYSSVRALHPTCRWLLLQSEDPP*LAPVHW
Trigger: CCAGTGCACAGGGGCCAGGCAGGGTGGGTCCTCGGA...CTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp AAGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTCCCCTGTGCACTGGTTaGTGGGGGCAACTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: KGATAVSGHFTQPAGGCCPLCTG*WGQLPG
Trigger: GCCCGGGAGTTGCCCCCACCAACCAGTGCACAGGGG...ACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp GGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCCCCTGTGCACTGGTTaGTGGGGGCAACTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GYSSVRALHPTCRWLLLQPLCTG*WGQLPG
Trigger: GCCCGGGAGTTGCCCCCACCAACCAGTGCACAGGGG...CTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR CAA 72 bp GGGGGCTCCTCGGGCGGAGAGGGCGAGCTGGACTGCTaGAGTTTCTGGCAGATCCTTGTGCCCGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GGSSGGEGELDC*SFWQILVPVFS
Trigger: GGAGAAAACGGGCACAAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGCCCTCTCCGCCCGAGGAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR CAA 72 bp CGGAGCAGCAGGGGGATGGAGACGTCATCCAGGATCTaGCGGCGCCGCATGGTGCGCAGGTCGAAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: RSSRGMETSSRI*RRRMVRRSKEK
Trigger: CTTCTCTTTCGACCTGCGCACCATGCGGCGCCGCAAGATCCTGGATGACGTCTCCATCCCCCTGCTGCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR TCA 90 bp CCAGAGAAGCGGCAGGGCGGGCAGCGCCCTCACGGGCATAGCAGTAGTAGTGACAGTTCGAGTCCTCCTTaGCCAGAGAGGCCACCATGG +
Preference number: 4 (lower is better)
Translates to: PEKRQGGQRPHGHSSSSDSSSPP*PERPPW
Trigger: CCATGGTGGCCTCTCTGGTCAAGGAGGACTCGAACT...GTCACTACTACTGCTATGCCCGTGAGGGCGCTGCCCGCCCTGCCGCTTCTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp CCAGTGCGGAGATGTGGGGAGTGCAGAGATGTAGGCCGCCCTGCTCCGGGCCTCGCAAAGACCCGTGTGTaGCCATCTCGGCTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: PVRRCGECRDVGRPAPGLAKTRV*PSRLLQ
Trigger: TTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGC...GAGGCCCGGAGCAGGGCGGCCTACATCTCTGCACTCCCCACATCTCCGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp AAGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTCCAAGATCTTGTCCATaGCGCCCGCGCTCCCGGACC +
Preference number: 4 (lower is better)
Translates to: KGATAVSGHFTQPAGGCCPRSCP*RPRSRT
Trigger: GGTCCGGGAGCGCGGGCGCCATGGACAAGATCTTGG...ACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CCA 90 bp GGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGGGCCAGGGCGCTAGATaGTGGCTCCTCCTCTGCGCA +
Preference number: 4 (lower is better)
Translates to: GYSSVRALHPTCRWLLLQGQGAR*WLLLCA
Trigger: TGCGCAGAGGAGGAGCCACCATCTAGCGCCCTGGCC...CTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CCA 90 bp TTTCCACAGAGGTTGAACTTGGGGCCGGGGGCTCCTCGGGCGGAGAGGGCGAGCATCCATGAGCTCCAATaGGAGGTGCTGGACCACGCT +
Preference number: 4 (lower is better)
Translates to: FPQRLNLGPGAPRAERASIHELQ*EVLDHA
Trigger: AGCGTGGTCCAGCACCTCCCATTGGAGCTCATGGAT...GCTCGCCCTCTCCGCCCGAGGAGCCCCCGGCCCCAAGTTCAACCTCTGTGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp AGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTCTGGCCCCTGTGCACTaGTTGGTGGGGGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: RGLQQCQGTSPNLQVAAVLAPVH*LVGATP
Trigger: GGGAGTTGCCCCCACCAACCAGTGCACAGGGGCCAG...AACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp GGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACAGCTCCCCGGAGGGGATaGCAGCATCCGGGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GRQRPVCAHLGCFKLTRTAPRRG*QHPGGS
Trigger: GGACCCACCCGGATGCTGCCATCCCCTCCGGGGAGC...TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp ACCATGCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAGCTCCCCGGAGGGGATaGCAGCATCCGGGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: TMQWRLVRGQVSVSVLLRAPRRG*QHPGGS
Trigger: GGACCCACCCGGATGCTGCCATCCCCTCCGGGGAGC...TCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR TCA 90 bp ACCATGCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGACGAGAGAGAGGTCCGTaGAGGCCTCCTCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: TMQWRLVRGQVSVSVLLRRERGP*RPPPGR
Trigger: CCTCCCGGGAGGAGGCCTTCACGGACCTCTCTCTCG...TCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp AGGTCTAGCCTGTTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTTCACGCTCCAGCGGCTaGCGCGCCGCCTCCAGCACG +
Preference number: 4 (lower is better)
Translates to: RSSLFPEHHQIFPHGEPASRSSG*RAASST
Trigger: CGTGCTGGAGGCGGCGCGGCAGCCGCTGGAGCGTGA...AGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAACAGGCTAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp GGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACAAGCAGCGCCAGGCACTaGTCACGCTCCAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: GRQRPVCAHLGCFKLTRTSSARH*SRSSGC
Trigger: GCAGCCGCTGGAGCGTGAGCAGTGCCTGGCGCTGCT...TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp TCTGCCCACCAGCTTCCTTGGAGTCCAGGCCTTCGATGTACAGGCTGGTGGGGGACCTTCTCGGCATCCTaGAGGGAGGCACACGACTCG +
Preference number: 4 (lower is better)
Translates to: SAHQLPWSPGLRCTGWWGTFSAS*REAHDS
Trigger: CGAGTCGTGTGCCTCCCTGCAGGATGCCGAGAAGGT...CCCCCACCAGCCTGTACATCGAAGGCCTGGACTCCAAGGAAGCTGGTGGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp AGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTCGTCATCCAGGATCTTaGGGCGCCGCATGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: RGLQQCQGTSPNLQVAAVRHPGS*GAAWCA
Trigger: TGCGCACCATGCGGCGCCGCAAGATCCTGGATGACG...AACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp AAGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTGGGGCAAAGGCCTCCTaGTGTGAGAAGCTAGCCCCC +
Preference number: 4 (lower is better)
Translates to: KGATAVSGHFTQPAGGCCGAKAS*CEKLAP
Trigger: GGGGGCTAGCTTCTCACAGCAGGAGGCCTTTGCCCC...ACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp CACCCGAGTGTCATTGAACAGGTACCACTGGTTCTCGGGCTCTGGCCTATCGGCTCCAATGGGAGGTGCTaGACCACGCTGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: HPSVIEQVPLVLGLWPIGSNGRC*TTLARA
Trigger: CGCCCTGGCCAGCGTGGTCCAGCACCTCCCATTGGA...GCCGATAGGCCAGAGCCCGAGAACCAGTGGTACCTGTTCAATGACACTCGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp CCAGAGAAGCGGCAGGGCGGGCAGCGCCCTCACGGGCATAGCAGTAGTAGTGACAGTTCTCTGGGGAAATaGCAGGCCGCTGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: PEKRQGGQRPHGHSSSSDSSLGK*QAAGCV
Trigger: AACACAGCCAGCGGCCTGCCATTTCCCCAGAGAACT...GTCACTACTACTGCTATGCCCGTGAGGGCGCTGCCCGCCCTGCCGCTTCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp GGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTGTGCACTGGTTGGTaGGGGCAACTCCCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GYSSVRALHPTCRWLLLQLCTGW*GQLPGC
Trigger: ACAGCCCGGGAGTTGCCCCCACCAACCAGTGCACAG...CTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp AGTCACCACCATTGCCACCTGCAGGATTGCAGCCCCCTGGAGAGCCTTCATCCTCTGGCCCCTGTGCACTaGTTGGTGGGGGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: SHHHCHLQDCSPLESLHPLAPVH*LVGATP
Trigger: GGGAGTTGCCCCCACCAACCAGTGCACAGGGGCCAG...AGGATGAAGGCTCTCCAGGGGGCTGCAATCCTGCAGGTGGCAATGGTGGTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp ACCATGCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAATGGCAGCATCCGGGTaGGTCCCCGCTCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TMQWRLVRGQVSVSVLLRMAASG*VPAPRL
Trigger: CAGCCTGGGAGCGGGGACCCACCCGGATGCTGCCAT...TCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
3UTR CAA 72 bp GAAGCGCAGCAGTGTGAGGATGAGGTAGCACGGCCCTaGGCTCAGCTCCACCACCTTCTCGGCATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: EAQQCEDEVARP*AQLHHLLGILQ
Trigger: CTGCAGGATGCCGAGAAGGTGGTGGAGCTGAGCCAAGGGCCGTGCTACCTCATCCTCACACTGCTGCGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR TCA 90 bp CACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGCCAACTGCTCAGAGGCTGCGAACAGCTCTTTaGGGCAGGGCAGGATGGCGG +
Preference number: 4 (lower is better)
Translates to: HPTCRWLLLQLQRPTAQRLRTAL*GRAGWR
Trigger: CCGCCATCCTGCCCTGCCTCAAAGAGCTGTTCGCAG...CCTCTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR TCA 90 bp TCCGCCAGCTGCTCCAGGCAGCTGGTCCCCGAGTTCGAGTCCTCCTTGACCAGAGGTCATCAGGGGCTGTaGGTTGTTCTCAGTCAAGCG +
Preference number: 4 (lower is better)
Translates to: SASCSRQLVPEFESSLTRGHQGL*VVLSQA
Trigger: CGCTTGACTGAGAACAACTCACAGCCCCTGATGACC...TCTGGTCAAGGAGGACTCGAACTCGGGGACCAGCTGCCTGGAGCAGCTGGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR TCA 90 bp TTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTAGGGAAGGAGGGCGAGAGAGAGGTCCGTaGAGGCCTCCTCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: FPEHHQIFPHGEPAREGGRERGP*RPPPGR
Trigger: CCTCCCGGGAGGAGGCCTTCACGGACCTCTCTCTCG...CCCTCCTTCCCTAGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp CGTCCAGGATGCGGAGAGGAAGTTCTCTGGGGAAATGGCAGGCCGCTGGCTGTGGAAGTCCAGGCATCCTaGCCCAGCAGCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: RPGCGEEVLWGNGRPLAVEVQAS*PSSCLM
Trigger: CATCAAGCAGCTGCTGGGGCAGGATGCCTGGACTTC...CACAGCCAGCGGCCTGCCATTTCCCCAGAGAACTTCCTCTCCGCATCCTGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp AAGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTGCCAGCTCGCTCTTCTaGGAAGTCCAGGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: KGATAVSGHFTQPAGGCCASSLF*EVQASC
Trigger: GCAGGATGCCTGGACTTCGCAGAAGAGCGAGCTGGC...ACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp GGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGTACTCCGAGCAGTCCTaGTGGGTGCCAGGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: GYSSVRALHPTCRWLLLQYSEQS*WVPGLN
Trigger: GTTCAGCCCTGGCACCCAGCAGGACTGCTCGGAGTA...CTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp ACCAGGTCCAGGACGGAGCGGGAGCCCTCAGAGCCACATGTCCGCTCCCCGGAGGCTTGGATCCTGCTGTaGTTTATACCGTACAGCAGT +
Preference number: 4 (lower is better)
Translates to: TRSRTEREPSEPHVRSPEAWILL*FIPYSS
Trigger: ACTGCTGTACGGTATAAAGCACAGCAGGATCCAAGC...CTCCGGGGAGCGGACATGTGGCTCTGAGGGCTCCCGCTCCGTCCTGGACCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp TACCTGGCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGACCCCTGTGCACTGGTTaGTGGGGGCAACTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: YLAPGGKGSGWQQVHIRRPLCTG*WGQLPG
Trigger: GCCCGGGAGTTGCCCCCACCAACCAGTGCACAGGGG...TCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGCCAGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp GCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAAAGGTCTGGCCCCTGTGCACTaGTTGGTGGGGGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: AVALGKGAGLGLCSSQKGLAPVH*LVGATP
Trigger: GGGAGTTGCCCCCACCAACCAGTGCACAGGGGCCAG...ACCTTTCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp TCTGCCCACCAGCTTCCTTGGAGTCCAGGCCTTCGATGTACAGGCTGGTGGGGGCCCAAAACCATGCAGTaGCGCTTGGTAAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SAHQLPWSPGLRCTGWWGPKTMQ*RLVRGQ
Trigger: CTGCCCCCTTACCAAGCGCCACTGCATGGTTTTGGG...CCCCCACCAGCCTGTACATCGAAGGCCTGGACTCCAAGGAAGCTGGTGGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR TCA 90 bp AAGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTAGTTCGAGTCCTCCTTaGCCAGAGAGGCCACCATGG +
Preference number: 4 (lower is better)
Translates to: KGATAVSGHFTQPAGGCCSSSPP*PERPPW
Trigger: CCATGGTGGCCTCTCTGGTCAAGGAGGACTCGAACT...ACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR TCA 90 bp GACATTGGGCCCAAACTCCACACCACCATCACAGCAGGCAGCCCCTGGGGAAGGGGTCATCAGGGGCTGTaGGTTGTTCTCAGTCAAGCG +
Preference number: 4 (lower is better)
Translates to: DIGPKLHTTITAGSPWGRGHQGL*VVLSQA
Trigger: CGCTTGACTGAGAACAACTCACAGCCCCTGATGACC...CCTTCCCCAGGGGCTGCCTGCTGTGATGGTGGTGTGGAGTTTGGGCCCAATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR TCA 90 bp ACCATGCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGACCCGGGAGGAGACGTTaGGGCAGCAGAGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: TMQWRLVRGQVSVSVLLRPGRRR*GSRDSR
Trigger: TCTGCTGTCTCTGCTGCCTCAACGTCTCCTCCCGGG...TCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR TCA 90 bp GGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACAGCAACTCCCGGGCTGTaGTGTCTTCTGTGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: GRQRPVCAHLGCFKLTRTATPGL*CLLWGA
Trigger: TGCGCCCCACAGAAGACATCACAGCCCGGGAGTTGC...TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR TCA 90 bp AGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGGCTTCCTAAGAGCCCACACGCAACTCCCGGGCTGTaGTGTCTTCTGTGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: SYKGQLLRGAHRLPKSPHATPGL*CLLWGA
Trigger: TGCGCCCCACAGAAGACATCACAGCCCGGGAGTTGC...GTGTGGGCTCTTAGGAAGCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp GACCACTCTCCGAAGACACTCCAGAGTGCACCACCACACTGCAGAGGTCATAGGCTCACCTGCTGGGCCTaGTCTAGGAACTCCACGGCG +
Preference number: 4 (lower is better)
Translates to: DHSPKTLQSAPPHCRGHRLTCWA*SRNSTA
Trigger: CGCCGTGGAGTTCCTAGAGCAGGCCCAGCAGGTGAG...CCTATGACCTCTGCAGTGTGGTGGTGCACTCTGGAGTGTCTTCGGAGAGTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp GCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAAAGGTAGCTCCAATGGGAGGTaGTGGACCACGCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AVALGKGAGLGLCSSQKGSSNGR*WTTLAR
Trigger: CCTGGCCAGCGTGGTCCAGCACCTCCCATTGGAGCT...ACCTTTCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp TCTGCCCACCAGCTTCCTTGGAGTCCAGGCCTTCGATGTACAGGCTGGTGGGGGAAGGCTTCGTGGGAGTaGTGGAAGGTCAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: SAHQLPWSPGLRCTGWWGKASWE*WKVRSM
Trigger: CATGCTCCTGACCTTCCAGCACTCCCACGAAGCCTT...CCCCCACCAGCCTGTACATCGAAGGCCTGGACTCCAAGGAAGCTGGTGGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp AAGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTCCTGCCCCAGCAGCTaGTTGATGCGGTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: KGATAVSGHFTQPAGGCCSCPSS*LMRSSL
Trigger: CAATGAGGACCGCATCAAGCAGCTGCTGGGGCAGGA...ACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp CACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGCCAACTGCTCAGAGGCCAGGGCGTCCAGGATaGGGAGAGGAAGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: HPTCRWLLLQLQRPTAQRPGRPG*GEEVLW
Trigger: CCAGAGAACTTCCTCTCCGCATCCTGGACGCCCTGG...CCTCTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp GACATTGGGCCCAAACTCCACACCACCATCACAGCAGGCAGCCCCTGGGGAAGGTCCTTTCCTCCTGACTaGTCTGCCCACCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: DIGPKLHTTITAGSPWGRSFPPD*SAHQLP
Trigger: AGGAAGCTGGTGGGCAGAGCAGTCAGGAGGAAAGGA...CCTTCCCCAGGGGCTGCCTGCTGTGATGGTGGTGTGGAGTTTGGGCCCAATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp GGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACGTCATCCAGGATCTTaGGGCGCCGCATGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: GRQRPVCAHLGCFKLTRTRHPGS*GAAWCA
Trigger: TGCGCACCATGCGGCGCCGCAAGATCCTGGATGACG...TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp AGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGGCTTCCTAAGAGCCCACACAGATGTAGGCCGCCCTaGTCCGGGCCTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SYKGQLLRGAHRLPKSPHRCRPP*SGPPSP
Trigger: AGGAGAAGGAGGCCCGGAGCAGGGCGGCCTACATCT...GTGTGGGCTCTTAGGAAGCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp CTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTTGCCACCTGCAGGATTaGAGCCCCCTGGAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: LQQCQGTSPNLQVAAVAACHLQD*SPLESL
Trigger: AAGGCTCTCCAGGGGGCTGCAATCCTGCAGGTGGCA...AGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp CTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTCCTCTTGGTAGGGCCTaGCTCCACAGCTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LQQCQGTSPNLQVAAVAAPLGRA*LHSFPQ
Trigger: CTGAGGGAAGCTGTGGAGGCAGGCCCTACCAAGAGG...AGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp GGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACCCCACAACACAGCCTaGCTGTGCGGGCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: GRQRPVCAHLGCFKLTRTPHNTA*LCGLST
Trigger: TGTGCTCAGCCCGCACAGGCAGGCTGTGTTGTGGGG...TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR CCA 90 bp TACCTGGCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGAGGCCAGGGCGCTAGATaGTGGCTCCTCCTCTGCGCA +
Preference number: 4 (lower is better)
Translates to: YLAPGGKGSGWQQVHIRRGQGAR*WLLLCA
Trigger: TGCGCAGAGGAGGAGCCACCATCTAGCGCCCTGGCC...TCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGCCAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp GCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAAAGGTGCCCTACCTGGCTCCTaGAGGGAAGGGGTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: AVALGKGAGLGLCSSQKGALPGS*REGVRL
Trigger: CAACCTGACCCCTTCCCTCCAGGAGCCAGGTAGGGC...ACCTTTCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp GGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACAGCCCTACCTGGCTCCTaGAGGGAAGGGGTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GRQRPVCAHLGCFKLTRTALPGS*REGVRL
Trigger: CAACCTGACCCCTTCCCTCCAGGAGCCAGGTAGGGC...TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp AAGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTCCCAAAACCATGCAGTaGCGCTTGGTAAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: KGATAVSGHFTQPAGGCCPKTMQ*RLVRGQ
Trigger: CTGCCCCCTTACCAAGCGCCACTGCATGGTTTTGGG...ACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
3UTR CAA 72 bp GTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTaGCAGCTACAAAGGCCAACTGCTCAGAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VRALHPTCRWLL*QLQRPTAQRSP
Trigger: TGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR TCA 90 bp GGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACAGCCCCAGCAGCTGCTTaGTGCGGTCCTCATTGGGAA +
Preference number: 4 (lower is better)
Translates to: GRQRPVCAHLGCFKLTRTAPAAA*CGPHWE
Trigger: TTCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGC...TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR TCA 90 bp AGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGGCTTCCTAAGAGCCCACACAATCTTGCCCGTGTCTaGCTTGGCCATGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SYKGQLLRGAHRLPKSPHNLARV*LGHEPG
Trigger: CCCCGGCTCATGGCCAAGTCAGACACGGGCAAGATT...GTGTGGGCTCTTAGGAAGCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR TCA 90 bp AAGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTGGTCATCAGGGGCTGTaGGTTGTTCTCAGTCAAGCG +
Preference number: 4 (lower is better)
Translates to: KGATAVSGHFTQPAGGCCGHQGL*VVLSQA
Trigger: CGCTTGACTGAGAACAACTCACAGCCCCTGATGACC...ACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR TCA 90 bp TTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTAGGGAAGGAGGGCCCGGGAGGAGACGTTaGGGCAGCAGAGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: FPEHHQIFPHGEPAREGGPGRRR*GSRDSR
Trigger: TCTGCTGTCTCTGCTGCCTCAACGTCTCCTCCCGGG...CCCTCCTTCCCTAGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR TCA 90 bp TACCTGGCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGAGCAACTCCCGGGCTGTaGTGTCTTCTGTGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: YLAPGGKGSGWQQVHIRRATPGL*CLLWGA
Trigger: TGCGCCCCACAGAAGACATCACAGCCCGGGAGTTGC...TCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGCCAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR TCA 90 bp GACATTGGGCCCAAACTCCACACCACCATCACAGCAGGCAGCCCCTGGGGAAGGAGGACTAAGGTGCCATaGGCTGTACCATCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: DIGPKLHTTITAGSPWGRRTKVP*AVPSFL
Trigger: GAGGAAGGATGGTACAGCTCATGGCACCTTAGTCCT...CCTTCCCCAGGGGCTGCCTGCTGTGATGGTGGTGTGGAGTTTGGGCCCAATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR TCA 90 bp CCAGAGAAGCGGCAGGGCGGGCAGCGCCCTCACGGGCATAGCAGTAGTAGTGACTCAAAACATTGGAGCTaGGGTCTAGCCTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PEKRQGGQRPHGHSSSSDSKHWS*GLACFL
Trigger: CAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGA...GTCACTACTACTGCTATGCCCGTGAGGGCGCTGCCCGCCCTGCCGCTTCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp GAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTAGCTCCAATGGGAGGTaGTGGACCACGCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EAKTRVCPSRLLQVNQDTSSNGR*WTTLAR
Trigger: CCTGGCCAGCGTGGTCCAGCACCTCCCATTGGAGCT...AGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp AGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGGCTTCCTAAGAGCCCACACGGAACCGGAACACCATaGAGTGGACCAGCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: SYKGQLLRGAHRLPKSPHGTGTP*SGPAPP
Trigger: TGGCGGAGCTGGTCCACTGCATGGTGTTCCGGTTCC...GTGTGGGCTCTTAGGAAGCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp AGTCACCACCATTGCCACCTGCAGGATTGCAGCCCCCTGGAGAGCCTTCATCCTTCCTGCCCCAGCAGCTaGTTGATGCGGTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: SHHHCHLQDCSPLESLHPSCPSS*LMRSSL
Trigger: CAATGAGGACCGCATCAAGCAGCTGCTGGGGCAGGA...AGGATGAAGGCTCTCCAGGGGGCTGCAATCCTGCAGGTGGCAATGGTGGTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp ACCATGCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGACCAGGGCGTCCAGGATaGGGAGAGGAAGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TMQWRLVRGQVSVSVLLRPGRPG*GEEVLW
Trigger: CCAGAGAACTTCCTCTCCGCATCCTGGACGCCCTGG...TCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGCGAGCTGGACTGCTTGAGTTTCTGGCAGATCCTTGTGCCCGTTTTCTCCTCCCAGGGCGTCCAGGATaGGGAGAGGAAGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GRAGLLEFLADPCARFLLPGRPG*GEEVLW
Trigger: CCAGAGAACTTCCTCTCCGCATCCTGGACGCCCTGG...GAGGAGAAAACGGGCACAAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp AGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGGCTTCCTAAGAGCCCACACTACTCCGAGCAGTCCTaGTGGGTGCCAGGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: SYKGQLLRGAHRLPKSPHYSEQS*WVPGLN
Trigger: GTTCAGCCCTGGCACCCAGCAGGACTGCTCGGAGTA...GTGTGGGCTCTTAGGAAGCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp GCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAAAGGTTACTCCGAGCAGTCCTaGTGGGTGCCAGGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: AVALGKGAGLGLCSSQKGYSEQS*WVPGLN
Trigger: GTTCAGCCCTGGCACCCAGCAGGACTGCTCGGAGTA...ACCTTTCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp AGGTCTAGCCTGTTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTCCTGCCTGGCCCCTGTaGACTGGTTGGTGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: RSSLFPEHHQIFPHGEPAPAWPL*TGWWGQ
Trigger: TTGCCCCCACCAACCAGTGCACAGGGGCCAGGCAGG...AGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAACAGGCTAGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GCCTCCATGACAGGCTCATACAGATCCGGGAAGCCCGGGAACCGGAACACCATGATGCAGTGTTTCCTTTaGCTCCGAGGACCCACCCTG +
Preference number: 4 (lower is better)
Translates to: ASMTGSYRSGKPGNRNTMMQCFL*LRGPTL
Trigger: CAGGGTGGGTCCTCGGAGGCAAAGGAAACACTGCAT...CATGGTGTTCCGGTTCCCGGGCTTCCCGGATCTGTATGAGCCTGTCATGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp CGTCCAGGATGCGGAGAGGAAGTTCTCTGGGGAAATGGCAGGCCGCTGGCTGTGGTAGTAGCGGTTTTCTaGTGTCAGCTTCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: RPGCGEEVLWGNGRPLAVVVAVF*CQLLGG
Trigger: TCCCCCGAGAAGCTGACAGCAGAAAACCGCTACTAC...CACAGCCAGCGGCCTGCCATTTCCCCAGAGAACTTCCTCTCCGCATCCTGGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp GAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGCGGCGCCGCATGGTaGGCAGGTCGAAAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: EAKTRVCPSRLLQVNQDTCGAAW*AGRKRS
Trigger: GCTTCTCTTTCGACCTGCGCACCATGCGGCGCCGCA...AGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAAAGGTTGCCACCTGCAGGATTaGAGCCCCCTGGAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: AVALGKGAGLGLCSSQKGCHLQD*SPLESL
Trigger: AAGGCTCTCCAGGGGGCTGCAATCCTGCAGGTGGCA...ACCTTTCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGACCAGTCCCTCTTGGTAGGGCCTaGCTCCACAGCTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: APGGKGSGWQQVHIRRPVPLGRA*LHSFPQ
Trigger: CTGAGGGAAGCTGTGGAGGCAGGCCCTACCAAGAGG...GACTGGTCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp AGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAAAGACCCGTGTGTaGCCATCTCGGCTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: RGLQQCQGTSPNLQVAAVAKTRV*PSRLLQ
Trigger: TTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGC...AACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp AAGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTGCAGGTGGCTGCTGTTaGAGCTACAAAGGCCAACTG +
Preference number: 4 (lower is better)
Translates to: KGATAVSGHFTQPAGGCCAGGCC*SYKGQL
Trigger: CAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGC...ACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp AAGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTGCTCCAGCAAGTCCTTaGTGTGTGACCCAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: KGATAVSGHFTQPAGGCCAPASP*CVTQSK
Trigger: CTTGCTCTGGGTCACACAGCAAGGACTTGCTGGAGC...ACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR GCA 90 bp GGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACATGCCTGGAAGGGCACTaGCCCTGGGCCAGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: GRQRPVCAHLGCFKLTRTCLEGH*PWARSF
Trigger: AAAGCTTCTGGCCCAGGGGCAGTGCCCTTCCAGGCA...TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR CCA 90 bp GGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGTCTTCCCACCCCGCCTaGCACAAGCCTCTATGTATC +
Preference number: 4 (lower is better)
Translates to: GYSSVRALHPTCRWLLLQSSHPA*HKPLCI
Trigger: GATACATAGAGGCTTGTGCCAGGCGGGGTGGGAAGA...CTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CCA 90 bp GAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTAGCCCGCTCACCTGCTaGGCCTGCTCTAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: EAKTRVCPSRLLQVNQDTSPLTC*ACSRNS
Trigger: GGAGTTCCTAGAGCAGGCCCAGCAGGTGAGCGGGCT...AGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp AGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTAGTTCTCTGGGGAAATaGCAGGCCGCTGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: RGLQQCQGTSPNLQVAAVSSLGK*QAAGCV
Trigger: AACACAGCCAGCGGCCTGCCATTTCCCCAGAGAACT...AACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp GAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTCTGTGCACTGGTTGGTaGGGGCAACTCCCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: EAKTRVCPSRLLQVNQDTLCTGW*GQLPGC
Trigger: ACAGCCCGGGAGTTGCCCCCACCAACCAGTGCACAG...AGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp CAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGTCTTGCGGCGCCGCATaGTGCGCAGGTCGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: QCQGTSPNLQVAAVAATKSCGAA*CAGRKR
Trigger: TCTCTTTCGACCTGCGCACCATGCGGCGCCGCAAGA...CTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp AGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGGCTTCCTAAGAGCCCACACTCTTGCGGCGCCGCATaGTGCGCAGGTCGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: SYKGQLLRGAHRLPKSPHSCGAA*CAGRKR
Trigger: TCTCTTTCGACCTGCGCACCATGCGGCGCCGCAAGA...GTGTGGGCTCTTAGGAAGCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp ACCATGCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGACTGGTTCTCGGGCTCTaGCCTATCGGCAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: TMQWRLVRGQVSVSVLLRLVLGL*PIGSSQ
Trigger: CTGGGAACTGCCGATAGGCCAGAGCCCGAGAACCAG...TCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp TCTGCCCACCAGCTTCCTTGGAGTCCAGGCCTTCGATGTACAGGCTGGTGGGGGTTGAACAGGTACCACTaGTTCTCGGGCTCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: SAHQLPWSPGLRCTGWWGLNRYH*FSGSGL
Trigger: TAGGCCAGAGCCCGAGAACCAGTGGTACCTGTTCAA...CCCCCACCAGCCTGTACATCGAAGGCCTGGACTCCAAGGAAGCTGGTGGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp TCTGCCCACCAGCTTCCTTGGAGTCCAGGCCTTCGATGTACAGGCTGGTGGGGGGGGAAGGGGTCAGGTTaGCAGCAGGTTCACATTAGA +
Preference number: 4 (lower is better)
Translates to: SAHQLPWSPGLRCTGWWGGKGSG*QQVHIR
Trigger: TCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCC...CCCCCACCAGCCTGTACATCGAAGGCCTGGACTCCAAGGAAGCTGGTGGGCAGA
59% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp AGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTCACCCAACCTGCAGGTaGCTGCTGTTGCAGCTACAA +
Preference number: 4 (lower is better)
Translates to: RGLQQCQGTSPNLQVAAVHPTCR*LLLQLQ
Trigger: TTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTG...AACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp GGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGTCAGTAGAGGGCTCTTaGCTCCCTGTGGCATCTCAC +
Preference number: 4 (lower is better)
Translates to: GYSSVRALHPTCRWLLLQSVEGS*LPVASH
Trigger: GTGAGATGCCACAGGGAGCCAAGAGCCCTCTACTGA...CTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CCA 90 bp GGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTGGGCCAGAAGCTTTaGCTCCAGCAAGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GYSSVRALHPTCRWLLLQLGQKL*LQQVLA
Trigger: AGCAAGGACTTGCTGGAGCCAAAGCTTCTGGCCCAG...CTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR TCA 90 bp TGTCTGTCTTGTCTTCGGTTAGAAGTTAGAAGGGGGCTACAGCAGTGTCAGGGCCACGCTGACCGGGTATaGCGACGTCACCACCGCCTC +
Preference number: 4 (lower is better)
Translates to: CLSCLRLEVRRGLQQCQGHADRV*RRHHRL
Trigger: GAGGCGGTGGTGACGTCGTCATACCCGGTCAGCGTG...GCCCTGACACTGCTGTAGCCCCCTTCTAACTTCTAACCGAAGACAAGACAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR TCA 90 bp CACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGCCAACTGCTCAGAGGGGACAACACCATCCATaGGCTCCAATGGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: HPTCRWLLLQLQRPTAQRGQHHP*APMGGA
Trigger: AGCACCTCCCATTGGAGCTCATGGATGGTGTTGTCC...CCTCTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR TCA 90 bp AGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGGCTTCCTAAGAGCCCACACAGTTCGAGTCCTCCTTaGCCAGAGAGGCCACCATGG +
Preference number: 4 (lower is better)
Translates to: SYKGQLLRGAHRLPKSPHSSSPP*PERPPW
Trigger: CCATGGTGGCCTCTCTGGTCAAGGAGGACTCGAACT...GTGTGGGCTCTTAGGAAGCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR TCA 90 bp GACCACTCTCCGAAGACACTCCAGAGTGCACCACCACACTGCAGAGGTCATAGGTGTCTGACTTGGCCATaGGCCGGGGATAGAAACCCG +
Preference number: 4 (lower is better)
Translates to: DHSPKTLQSAPPHCRGHRCLTWP*AGDRNP
Trigger: CGGGTTTCTATCCCCGGCTCATGGCCAAGTCAGACA...CCTATGACCTCTGCAGTGTGGTGGTGCACTCTGGAGTGTCTTCGGAGAGTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR TCA 90 bp CTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTGCGAGCTGGACTGCTTaGGTTTCTGGCAGATCCTTG +
Preference number: 4 (lower is better)
Translates to: LQQCQGTSPNLQVAAVAAASWTA*VSGRSL
Trigger: CAAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGC...AGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR TCA 90 bp GTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTCGAGAGAGAGGTCCGTaGAGGCCTCCTCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: VCAHLGCFKLTRTLGCKVRERGP*RPPPGR
Trigger: CCTCCCGGGAGGAGGCCTTCACGGACCTCTCTCTCG...AACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR TCA 90 bp ACCATGCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGACCTGGGTTCCCACATTaGCTCACACCTGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: TMQWRLVRGQVSVSVLLRPGFPH*LTPAKG
Trigger: GCCCTTTGCAGGTGTGAGTCAATGTGGGAACCCAGG...TCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR GCA 90 bp AGGTCTAGCCTGTTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTAGGAGCCCGCTCACCTaGTGGGCCTGCTCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: RSSLFPEHHQIFPHGEPARSPLT*WACSRN
Trigger: GTTCCTAGAGCAGGCCCAGCAGGTGAGCGGGCTCCT...AGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAACAGGCTAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACATGGTGGCTCCTCCTCTaGGCAGGAGATGACTGCGAA +
Preference number: 4 (lower is better)
Translates to: GRQRPVCAHLGCFKLTRTWWLLL*AGDDCE
Trigger: TTCGCAGTCATCTCCTGCGCAGAGGAGGAGCCACCA...TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp TTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTAGGGAAGGAGGGGGAACCGGAACACCATaGAGTGGACCAGCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: FPEHHQIFPHGEPAREGGGTGTP*SGPAPP
Trigger: TGGCGGAGCTGGTCCACTGCATGGTGTTCCGGTTCC...CCCTCCTTCCCTAGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp TACCTGGCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGAGCCAGCTCGCTCTTCTaGGAAGTCCAGGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: YLAPGGKGSGWQQVHIRRASSLF*EVQASC
Trigger: GCAGGATGCCTGGACTTCGCAGAAGAGCGAGCTGGC...TCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGCCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp CACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGCCAACTGCTCAGAGGGAGGGCGAGCTGGACTaGTTGAGTTTCTGGCAGATC +
Preference number: 4 (lower is better)
Translates to: HPTCRWLLLQLQRPTAQREGELD*LSFWQI
Trigger: GATCTGCCAGAAACTCAAGCAGTCCAGCTCGCCCTC...CCTCTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp AGGTCTAGCCTGTTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTCGTCATCCAGGATCTTaGGGCGCCGCATGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: RSSLFPEHHQIFPHGEPARHPGS*GAAWCA
Trigger: TGCGCACCATGCGGCGCCGCAAGATCCTGGATGACG...AGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAACAGGCTAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACATCCATCAAGTCCTTGTaGAGGGTGGGCTCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: GRQRPVCAHLGCFKLTRTSIKSL*RVGSVR
Trigger: CCGGACAGAGCCCACCCTGCACAAGGACTTGATGGA...TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTACCACCATTGCCACCTaGAGGATTGCAGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: EAKTRVCPSRLLQVNQDTTTIAT*RIAAPW
Trigger: CCAGGGGGCTGCAATCCTGCAGGTGGCAATGGTGGT...AGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp CTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTGCAAAGACCCGTGTGTaGCCATCTCGGCTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: LQQCQGTSPNLQVAAVAAAKTRV*PSRLLQ
Trigger: TTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGC...AGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp AGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGGCTTCCTAAGAGCCCACACGCTACAAAGGCCAACTaGTCAGAGGAGCCCACAGGC +
Preference number: 4 (lower is better)
Translates to: SYKGQLLRGAHRLPKSPHATKAN*SEEPTG
Trigger: GCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGC...GTGTGGGCTCTTAGGAAGCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp CACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGCCAACTGCTCAGAGGGCAGGTGGCTGCTGTTaGAGCTACAAAGGCCAACTG +
Preference number: 4 (lower is better)
Translates to: HPTCRWLLLQLQRPTAQRAGGCC*SYKGQL
Trigger: CAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGC...CCTCTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp GGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACAACATTGACTCACACCTaGAAAGGGCAGCCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: GRQRPVCAHLGCFKLTRTTLTHT*KGQPRG
Trigger: ACCCCGGGGCTGCCCTTTGCAGGTGTGAGTCAATGT...TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR CCA 90 bp CCATCACAGCCCCTGAGTCCAAGGAAGAACAATCTCTTGCTTAGGCTTACTTTTGCGAAGACGTCGGGGTaGTGGCGGCCGGCCACGTGC +
Preference number: 4 (lower is better)
Translates to: PSQPLSPRKNNLLLRLTFAKTSG*WRPATC
Trigger: GCACGTGGCCGGCCGCCACCACCCCGACGTCTTCGC...AAAAGTAAGCCTAAGCAAGAGATTGTTCTTCCTTGGACTCAGGGGCTGTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CCA 90 bp AGTCACCACCATTGCCACCTGCAGGATTGCAGCCCCCTGGAGAGCCTTCATCCTGCTTCGTGGGAGTGCTaGAAGGTCAGGAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: SHHHCHLQDCSPLESLHPASWEC*KVRSMY
Trigger: GTACATGCTCCTGACCTTCCAGCACTCCCACGAAGC...AGGATGAAGGCTCTCCAGGGGGCTGCAATCCTGCAGGTGGCAATGGTGGTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp GACATTGGGCCCAAACTCCACACCACCATCACAGCAGGCAGCCCCTGGGGAAGGGACTGCTTGAGTTTCTaGCAGATCCTTGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: DIGPKLHTTITAGSPWGRDCLSF*QILVPV
Trigger: AACGGGCACAAGGATCTGCCAGAAACTCAAGCAGTC...CCTTCCCCAGGGGCTGCCTGCTGTGATGGTGGTGTGGAGTTTGGGCCCAATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CCA 90 bp ACCATGCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAGCCCACCAGCTTCCTTaGAGTCCAGGCCTTCGATGT +
Preference number: 4 (lower is better)
Translates to: TMQWRLVRGQVSVSVLLRAHQLP*SPGLRC
Trigger: ACATCGAAGGCCTGGACTCCAAGGAAGCTGGTGGGC...TCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp CAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGCCCACCAGCTTCCTTaGAGTCCAGGCCTTCGATGT +
Preference number: 4 (lower is better)
Translates to: QCQGTSPNLQVAAVAATKAHQLP*SPGLRC
Trigger: ACATCGAAGGCCTGGACTCCAAGGAAGCTGGTGGGC...CTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp TTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTAGGGAAGGAGGGTCTTGCGGCGCCGCATaGTGCGCAGGTCGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: FPEHHQIFPHGEPAREGGSCGAA*CAGRKR
Trigger: TCTCTTTCGACCTGCGCACCATGCGGCGCCGCAAGA...CCCTCCTTCCCTAGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp ACCATGCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAGGAGCAGCAGGGGGATaGAGACGTCATCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: TMQWRLVRGQVSVSVLLRGAAGG*RRHPGS
Trigger: AGATCCTGGATGACGTCTCCATCCCCCTGCTGCTCC...TCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp TACCTGGCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGACTGGTTCTCGGGCTCTaGCCTATCGGCAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: YLAPGGKGSGWQQVHIRRLVLGL*PIGSSQ
Trigger: CTGGGAACTGCCGATAGGCCAGAGCCCGAGAACCAG...TCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGCCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp ACCATGCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGACCCAAAACCATGCAGTaGCGCTTGGTAAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TMQWRLVRGQVSVSVLLRPKTMQ*RLVRGQ
Trigger: CTGCCCCCTTACCAAGCGCCACTGCATGGTTTTGGG...TCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
3UTR CAA 72 bp GCATCCTGCCCCAGCAGCTGCTTGATGCGGTCCTCATaGGGAACATGGAGGTCCTTGATGGCCTCCATGACA +
Preference number: 4 (lower is better)
Translates to: ASCPSSCLMRSS*GTWRSLMASMT
Trigger: TGTCATGGAGGCCATCAAGGACCTCCATGTTCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGCAGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
3UTR CAA 72 bp TTCTGCGAAGTCCAGGCATCCTGCCCCAGCAGCTGCTaGATGCGGTCCTCATTGGGAACATGGAGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: FCEVQASCPSSC*MRSSLGTWRSL
Trigger: CAAGGACCTCCATGTTCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGCAGGATGCCTGGACTTCGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR TCA 90 bp TGTCTGTCTTGTCTTCGGTTAGAAGTTAGAAGGGGGCTACAGCAGTGTCAGGGCGCCCCTGCTTCACGCTaGCCGGGTATGACGACGTCA +
Preference number: 4 (lower is better)
Translates to: CLSCLRLEVRRGLQQCQGAPASR*PGMTTS
Trigger: TGACGTCGTCATACCCGGTCAGCGTGAAGCAGGGGC...GCCCTGACACTGCTGTAGCCCCCTTCTAACTTCTAACCGAAGACAAGACAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR TCA 90 bp GGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACAGGACAACACCATCCATaGGCTCCAATGGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: GRQRPVCAHLGCFKLTRTGQHHP*APMGGA
Trigger: AGCACCTCCCATTGGAGCTCATGGATGGTGTTGTCC...TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS-3UTR TCA 90 bp AGGTCTAGCCTGTTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTGCCCCAGCAGCTGCTTaGTGCGGTCCTCATTGGGAA +
Preference number: 4 (lower is better)
Translates to: RSSLFPEHHQIFPHGEPAAPAAA*CGPHWE
Trigger: TTCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGC...AGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAACAGGCTAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR TCA 90 bp AGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTCCTGAAGGATGCTGTTaGCATAGCATGTGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: RGLQQCQGTSPNLQVAAVPEGCC*HSMCCP
Trigger: TGGGCAACACATGCTATGTCAACAGCATCCTTCAGG...AACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR TCA 90 bp GACCACTCTCCGAAGACACTCCAGAGTGCACCACCACACTGCAGAGGTCATAGGGCGAGCTGGACTGCTTaGGTTTCTGGCAGATCCTTG +
Preference number: 4 (lower is better)
Translates to: DHSPKTLQSAPPHCRGHRASWTA*VSGRSL
Trigger: CAAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGC...CCTATGACCTCTGCAGTGTGGTGGTGCACTCTGGAGTGTCTTCGGAGAGTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR TCA 90 bp CACCCGAGTGTCATTGAACAGGTACCACTGGTTCTCGGGCTCTGGCCTATCGGCAGGACTAAGGTGCCATaGGCTGTACCATCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HPSVIEQVPLVLGLWPIGRTKVP*AVPSFL
Trigger: GAGGAAGGATGGTACAGCTCATGGCACCTTAGTCCT...GCCGATAGGCCAGAGCCCGAGAACCAGTGGTACCTGTTCAATGACACTCGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR TCA 90 bp GCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAAAGGTGGCCATCACAGCCCCTaGGTCCAAGGAAGAACAATC +
Preference number: 4 (lower is better)
Translates to: AVALGKGAGLGLCSSQKGGHHSP*VQGRTI
Trigger: GATTGTTCTTCCTTGGACTCAGGGGCTGTGATGGCC...ACCTTTCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR TCA 90 bp AGTCACCACCATTGCCACCTGCAGGATTGCAGCCCCCTGGAGAGCCTTCATCCTGCTACTCAGACGCCATaGATAAGGCCTGAAGGATGC +
Preference number: 4 (lower is better)
Translates to: SHHHCHLQDCSPLESLHPATQTP*IRPEGC
Trigger: GCATCCTTCAGGCCTTATTCATGGCGTCTGAGTAGC...AGGATGAAGGCTCTCCAGGGGGCTGCAATCCTGCAGGTGGCAATGGTGGTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp AGTCACCACCATTGCCACCTGCAGGATTGCAGCCCCCTGGAGAGCCTTCATCCTTGCGCAGGAGATGACTaGGAACAGCTCTTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: SHHHCHLQDCSPLESLHPCAGDD*EQLFEA
Trigger: TGCCTCAAAGAGCTGTTCGCAGTCATCTCCTGCGCA...AGGATGAAGGCTCTCCAGGGGGCTGCAATCCTGCAGGTGGCAATGGTGGTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp GAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGTGGCTCCTCCTCTaGGCAGGAGATGACTGCGAA +
Preference number: 4 (lower is better)
Translates to: EAKTRVCPSRLLQVNQDTWWLLL*AGDDCE
Trigger: TTCGCAGTCATCTCCTGCGCAGAGGAGGAGCCACCA...AGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAAAGGTAAGGCTTCGTGGGAGTaGTGGAAGGTCAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: AVALGKGAGLGLCSSQKGKASWE*WKVRSM
Trigger: CATGCTCCTGACCTTCCAGCACTCCCACGAAGCCTT...ACCTTTCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GCCAGGGCTGAACCAGGGCGTCCAGGATGCGGAGAGGAAGTTCTCTGGGGAAATTCTGGCAGATCCTTGTaGCCGTTTTCTCCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: ARAEPGRPGCGEEVLWGNSGRSL*PFSPLR
Trigger: ACGAAGAGGAGAAAACGGGCACAAGGATCTGCCAGA...ATTTCCCCAGAGAACTTCCTCTCCGCATCCTGGACGCCCTGGTTCAGCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp GCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGACCAGTCGAGGGCGAGCTGGACTaGTTGAGTTTCTGGCAGATC +
Preference number: 4 (lower is better)
Translates to: APGGKGSGWQQVHIRRPVEGELD*LSFWQI
Trigger: GATCTGCCAGAAACTCAAGCAGTCCAGCTCGCCCTC...GACTGGTCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp ACCATGCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAATGCAGTGTTTCCTTTaGCTCCGAGGACCCACCCTG +
Preference number: 4 (lower is better)
Translates to: TMQWRLVRGQVSVSVLLRMQCFL*LRGPTL
Trigger: CAGGGTGGGTCCTCGGAGGCAAAGGAAACACTGCAT...TCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp CAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGTCCTTTCCTCCTGACTaGTCTGCCCACCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QCQGTSPNLQVAAVAATKSFPPD*SAHQLP
Trigger: AGGAAGCTGGTGGGCAGAGCAGTCAGGAGGAAAGGA...CTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp TACCTGGCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGAAGTGCACCACCACACTaGAGAGGTCATAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: YLAPGGKGSGWQQVHIRRSAPPH*RGHRPG
Trigger: GCCAGGCCTATGACCTCTGCAGTGTGGTGGTGCACT...TCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGCCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp ACCATGCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAGAAGACACTCCAGAGTaGACCACCACACTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: TMQWRLVRGQVSVSVLLREDTPE*TTTLQR
Trigger: CCTCTGCAGTGTGGTGGTGCACTCTGGAGTGTCTTC...TCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp CAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGGAAGTCACCACCATTaGCACCTGCAGGATTGCAGC +
Preference number: 4 (lower is better)
Translates to: QCQGTSPNLQVAAVAATKGSHHH*HLQDCS
Trigger: GCTGCAATCCTGCAGGTGGCAATGGTGGTGACTTCC...CTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp CAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGCAACCTGCAGGTGGCTaGTGTTGCAGCTACAAAGGC +
Preference number: 4 (lower is better)
Translates to: QCQGTSPNLQVAAVAATKQPAGG*CCSYKG
Trigger: GCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTG...CTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp AGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGGCTTCCTAAGAGCCCACACCAACCTGCAGGTGGCTaGTGTTGCAGCTACAAAGGC +
Preference number: 4 (lower is better)
Translates to: SYKGQLLRGAHRLPKSPHQPAGG*CCSYKG
Trigger: GCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTG...GTGTGGGCTCTTAGGAAGCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp CACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGCCAACTGCTCAGAGGTCCTCATTGGGAACATaGAGGTCCTTGATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HPTCRWLLLQLQRPTAQRSSLGT*RSLMAS
Trigger: GGAGGCCATCAAGGACCTCCATGTTCCCAATGAGGA...CCTCTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp GCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAAAGGTGAAATGGCAGGCCGCTaGCTGTGTTCTAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: AVALGKGAGLGLCSSQKGEMAGR*LCSRKP
Trigger: TGGCTTCCTAGAACACAGCCAGCGGCCTGCCATTTC...ACCTTTCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp ATGCGGAGAGGAAGTTCTCTGGGGAAATGGCAGGCCGCTGGCTGTGTTCTAGGAGAAATGGCAGGCCGCTaGCTGTGTTCTAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: MRRGSSLGKWQAAGCVLGEMAGR*LCSRKP
Trigger: TGGCTTCCTAGAACACAGCCAGCGGCCTGCCATTTC...TCCTAGAACACAGCCAGCGGCCTGCCATTTCCCCAGAGAACTTCCTCTCCGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp TTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTAGGGAAGGAGGGGGAGAGGAAGTTCTCTaGGGAAATGGCAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: FPEHHQIFPHGEPAREGGGEEVL*GNGRPL
Trigger: CAGCGGCCTGCCATTTCCCCAGAGAACTTCCTCTCC...CCCTCCTTCCCTAGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp TGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAGCTCCCCGGAGGGGATaGCAGCATCCGGGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: CAHLGCFKLTRTLGCKVLAPRRG*QHPGGS
Trigger: GGACCCACCCGGATGCTGCCATCCCCTCCGGGGAGC...TAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp CACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGCCAACTGCTCAGAGGTTGAACAGGTACCACTaGTTCTCGGGCTCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: HPTCRWLLLQLQRPTAQRLNRYH*FSGSGL
Trigger: TAGGCCAGAGCCCGAGAACCAGTGGTACCTGTTCAA...CCTCTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp CCAGTGCGGAGATGTGGGGAGTGCAGAGATGTAGGCCGCCCTGCTCCGGGCCTCTGTTGTCTTTGGAAATaGCTTCCATCAAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PVRRCGECRDVGRPAPGLCCLWK*LPSSPC
Trigger: ACAAGGACTTGATGGAAGCCATTTCCAAAGACAACA...GAGGCCCGGAGCAGGGCGGCCTACATCTCTGCACTCCCCACATCTCCGCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp GGGCGAGCTGGACTGCTTGAGTTTCTGGCAGATCCTTGTGCCCGTTTTCTCCTCAGGATTGCAGCCCCCTaGAGAGCCTTCATCCTCATC +
Preference number: 4 (lower is better)
Translates to: GRAGLLEFLADPCARFLLRIAAP*RAFILI
Trigger: GATGAGGATGAAGGCTCTCCAGGGGGCTGCAATCCT...GAGGAGAAAACGGGCACAAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp TGTCTGTCTTGTCTTCGGTTAGAAGTTAGAAGGGGGCTACAGCAGTGTCAGGGCCAGCCCCGGGGTCTGTaGGCTGAACCAGACATGGCT +
Preference number: 4 (lower is better)
Translates to: CLSCLRLEVRRGLQQCQGQPRGL*AEPDMA
Trigger: AGCCATGTCTGGTTCAGCCCACAGACCCCGGGGCTG...GCCCTGACACTGCTGTAGCCCCCTTCTAACTTCTAACCGAAGACAAGACAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR TCA 90 bp CAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGTCAGGAGCATGTACTTaGGCACAGACAAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QCQGTSPNLQVAAVAATKSGACT*AQTRQL
Trigger: GAGCTGCCTTGTCTGTGCTCAAGTACATGCTCCTGA...CTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR TCA 90 bp GGGCGAGCTGGACTGCTTGAGTTTCTGGCAGATCCTTGTGCCCGTTTTCTCCTCTCAGGAGCATGTACTTaGGCACAGACAAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GRAGLLEFLADPCARFLLSGACT*AQTRQL
Trigger: GAGCTGCCTTGTCTGTGCTCAAGTACATGCTCCTGA...GAGGAGAAAACGGGCACAAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR TCA 90 bp TGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAGCTGGGTGCCAGGGCTaGACCAGGGCGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: CAHLGCFKLTRTLGCKVLAGCQG*TRASRM
Trigger: CATCCTGGACGCCCTGGTTCAGCCCTGGCACCCAGC...TAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR TCA 90 bp CACAAGGAACATGAACACCTTTGCAGTAAAATCAGGACTCTAACCACAAGGGGGGCTGGGTGCCAGGGCTaGACCAGGGCGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: HKEHEHLCSKIRTLTTRGAGCQG*TRASRM
Trigger: CATCCTGGACGCCCTGGTTCAGCCCTGGCACCCAGC...CCCCCTTGTGGTTAGAGTCCTGATTTTACTGCAAAGGTGTTCATGTTCCTTGTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR TCA 90 bp CACCCGAGTGTCATTGAACAGGTACCACTGGTTCTCGGGCTCTGGCCTATCGGCACACCCGAGTGTCATTaGACAGGTACCACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: HPSVIEQVPLVLGLWPIGTPECH*TGTTGS
Trigger: AGAACCAGTGGTACCTGTTCAATGACACTCGGGTGT...GCCGATAGGCCAGAGCCCGAGAACCAGTGGTACCTGTTCAATGACACTCGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR TCA 90 bp AGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGGCTTCCTAAGAGCCCACACTACCCTTCATCAGGCTaGGGACTAAGGTGCCATGAG +
Preference number: 4 (lower is better)
Translates to: SYKGQLLRGAHRLPKSPHYPSSG*GLRCHE
Trigger: CTCATGGCACCTTAGTCCTCAGCCTGATGAAGGGTA...GTGTGGGCTCTTAGGAAGCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR TCA 90 bp GGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACATACCCTTCATCAGGCTaGGGACTAAGGTGCCATGAG +
Preference number: 4 (lower is better)
Translates to: GRQRPVCAHLGCFKLTRTYPSSG*GLRCHE
Trigger: CTCATGGCACCTTAGTCCTCAGCCTGATGAAGGGTA...TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR TCA 90 bp CACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGCCAACTGCTCAGAGGGGGACTGATCCCCAATaGAAGGGACTTAGGTCTTAC +
Preference number: 4 (lower is better)
Translates to: HPTCRWLLLQLQRPTAQRGTDPQ*KGLRSY
Trigger: GTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCC...CCTCTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR TCA 90 bp GGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACAGGAGCACACAATGTCTaGAGCTACTCAGACGCCATG +
Preference number: 4 (lower is better)
Translates to: GRQRPVCAHLGCFKLTRTGAHNV*SYSDAM
Trigger: CATGGCGTCTGAGTAGCTTCAGACATTGTGTGCTCC...TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp CCATCACAGCCCCTGAGTCCAAGGAAGAACAATCTCTTGCTTAGGCTTACTTTTCCCTCGGGCAGCAGCTaGAGACCCAGCTGCACGCAG +
Preference number: 4 (lower is better)
Translates to: PSQPLSPRKNNLLLRLTFPSGSS*RPSCTQ
Trigger: CTGCGTGCAGCTGGGTCTGCAGCTGCTGCCCGAGGG...AAAAGTAAGCCTAAGCAAGAGATTGTTCTTCCTTGGACTCAGGGGCTGTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp GTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTCTCACCTGCTGGGCCTaGTCTAGGAACTCCACGGCG +
Preference number: 4 (lower is better)
Translates to: VCAHLGCFKLTRTLGCKVLTCWA*SRNSTA
Trigger: CGCCGTGGAGTTCCTAGAGCAGGCCCAGCAGGTGAG...AACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp AGGTCTAGCCTGTTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTGAAGTCCAGGCATCCTaGCCCAGCAGCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: RSSLFPEHHQIFPHGEPAEVQAS*PSSCLM
Trigger: CATCAAGCAGCTGCTGGGGCAGGATGCCTGGACTTC...AGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAACAGGCTAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp TGTCTGTCTTGTCTTCGGTTAGAAGTTAGAAGGGGGCTACAGCAGTGTCAGGGCGCCAGCTCGCTCTTCTaGGAAGTCCAGGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: CLSCLRLEVRRGLQQCQGASSLF*EVQASC
Trigger: GCAGGATGCCTGGACTTCGCAGAAGAGCGAGCTGGC...GCCCTGACACTGCTGTAGCCCCCTTCTAACTTCTAACCGAAGACAAGACAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp ACCATGCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAGTAGTAGCGGTTTTCTaGTGTCAGCTTCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: TMQWRLVRGQVSVSVLLRVVAVF*CQLLGG
Trigger: TCCCCCGAGAAGCTGACAGCAGAAAACCGCTACTAC...TCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GACGTTGAGGCAGCAGAGACAGCAGATCCGAGTCACTATCTTGCCTCCAAACATCGGAGATGTGGGGAGTaGAGAGATGTAGGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: DVEAAETADPSHYLASKHRRCGE*RDVGRP
Trigger: AGGGCGGCCTACATCTCTGCACTCCCCACATCTCCG...ATGTTTGGAGGCAAGATAGTGACTCGGATCTGCTGTCTCTGCTGCCTCAACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp CACCCGAGTGTCATTGAACAGGTACCACTGGTTCTCGGGCTCTGGCCTATCGGCTGTGCCCATCTCGGCTaGTTCAAGTTAACCAGGACA +
Preference number: 4 (lower is better)
Translates to: HPSVIEQVPLVLGLWPIGCAHLG*FKLTRT
Trigger: TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA...GCCGATAGGCCAGAGCCCGAGAACCAGTGGTACCTGTTCAATGACACTCGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp TGTCTGTCTTGTCTTCGGTTAGAAGTTAGAAGGGGGCTACAGCAGTGTCAGGGCGCTTTCAGCTGCTTCTaGCTGGAAGGGCACTGCCCC +
Preference number: 4 (lower is better)
Translates to: CLSCLRLEVRRGLQQCQGAFSCF*LEGHCP
Trigger: GGGGCAGTGCCCTTCCAGGCAGAAGCAGCTGAAAGC...GCCCTGACACTGCTGTAGCCCCCTTCTAACTTCTAACCGAAGACAAGACAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGGCCACCCCGCGAGCTaGCACTCTGACCGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTGHPAS*HSDRVP
Trigger: GGGGACGCGGTCAGAGTGGCAGCTCGCGGGGTGGCC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530267.5
CDS-3UTR CCA 90 bp TGGGTATTTTTCTTGGCTGTGAATAAGAACAAATGCTCTCTACCTCAGCGTCTGGGCACACAGCGCGGGTaGCGAGCCAGCAGCCGTGCC +
Preference number: 4 (lower is better)
Translates to: WVFFLAVNKNKCSLPQRLGTQRG*RASSRA
Trigger: GGCACGGCTGCTGGCTCGCCACCCGCGCTGTGTGCC...CAGACGCTGAGGTAGAGAGCATTTGTTCTTATTCACAGCCAAGAAAAATACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CCA 90 bp AGGTCTAGCCTGTTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTAGGTGGAAGGCTTCGTaGGAGTGCTGGAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RSSLFPEHHQIFPHGEPARWKAS*ECWKVR
Trigger: CCTGACCTTCCAGCACTCCCACGAAGCCTTCCACCT...AGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAACAGGCTAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp TTGTGCAAGGCTTGGATCCTGCTGTGCTTTATACCGTACAGCAGTCGGAAGGAAGCTGCTCCAGGCAGCTaGTCCCCGAGTTCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LCKAWILLCFIPYSSRKEAAPGS*SPSSSP
Trigger: AGGACTCGAACTCGGGGACCAGCTGCCTGGAGCAGC...TTCCTTCCGACTGCTGTACGGTATAAAGCACAGCAGGATCCAAGCCTTGCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp ACCATGCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGATCCTCATTGGGAACATaGAGGTCCTTGATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TMQWRLVRGQVSVSVLLRSSLGT*RSLMAS
Trigger: GGAGGCCATCAAGGACCTCCATGTTCCCAATGAGGA...TCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp AGGTCTAGCCTGTTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTGGAGCAGCAGGGGGATaGAGACGTCATCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: RSSLFPEHHQIFPHGEPAGAAGG*RRHPGS
Trigger: AGATCCTGGATGACGTCTCCATCCCCCTGCTGCTCC...AGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAACAGGCTAGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp TTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTAGGGAAGGAGGGCACCCAACCTGCAGGTaGCTGCTGTTGCAGCTACAA +
Preference number: 4 (lower is better)
Translates to: FPEHHQIFPHGEPAREGGHPTCR*LLLQLQ
Trigger: TTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTG...CCCTCCTTCCCTAGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp GTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTGGACACCCAAAATGCTaGGGTGAGGGCAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VCAHLGCFKLTRTLGCKVGHPKC*GEGSPG
Trigger: CCCTGGGCTGCCCTCACCCCAGCATTTTGGGTGTCC...AACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR TCA 90 bp GAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTCCATGCAGTCAGTGCTaGGGAAAACAGCCTAGACTC +
Preference number: 4 (lower is better)
Translates to: EAKTRVCPSRLLQVNQDTPCSQC*GKQPRL
Trigger: GAGTCTAGGCTGTTTTCCTCAGCACTGACTGCATGG...AGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR TCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGAGGGGCGAGGTGCGTaGAATGGGGCGGAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTEGRGA*NGAEPE
Trigger: CTCCGGCTCCGCCCCATTTCACGCACCTCGCCCCTC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000530267.5
CDS-3UTR GCA 90 bp CAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGCCCAGACGGAAGAGATaGTGCTTCCACTGCAAAATC +
Preference number: 4 (lower is better)
Translates to: QCQGTSPNLQVAAVAATKPRRKR*CFHCKI
Trigger: GATTTTGCAGTGGAAGCAGCATCTCTTCCGTCTGGG...CTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATTGGCGGCCGGCCACGTaGAGCAGCTGGCAGCCCACG +
Preference number: 4 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNWRPAT*SSWQPT
Trigger: CGTGGGCTGCCAGCTGCTGCACGTGGCCGGCCGCCA...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATGGCGCTCGCACACGGTaGGCAGCACCTCGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNGARTR*AAPRAA
Trigger: TGCGGCGCGAGGTGCTGCGCACCGTGTGCGAGCGCC...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp AGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGGCTTCCTAAGAGCCCACACTCTGGCAGATCCTTGTaGCCGTTTTCTCCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: SYKGQLLRGAHRLPKSPHSGRSL*PFSPLR
Trigger: ACGAAGAGGAGAAAACGGGCACAAGGATCTGCCAGA...GTGTGGGCTCTTAGGAAGCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp CACAAGGAACATGAACACCTTTGCAGTAAAATCAGGACTCTAACCACAAGGGGGCCTGCCTGGCCCCTGTaGACTGGTTGGTGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: HKEHEHLCSKIRTLTTRGPAWPL*TGWWGQ
Trigger: TTGCCCCCACCAACCAGTGCACAGGGGCCAGGCAGG...CCCCCTTGTGGTTAGAGTCCTGATTTTACTGCAAAGGTGTTCATGTTCCTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp AGGCTTCCTAAGAGCCCACACTTCACAAGGAACATGAACACCTTTGCAGTAAAATCCGAGGACCCACCCTaGCTGGCCCCTGTGCACTGG +
Preference number: 4 (lower is better)
Translates to: RLPKSPHFTRNMNTFAVKSEDPP*LAPVHW
Trigger: CCAGTGCACAGGGGCCAGGCAGGGTGGGTCCTCGGA...TTTTACTGCAAAGGTGTTCATGTTCCTTGTGAAGTGTGGGCTCTTAGGAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp TGTCTGTCTTGTCTTCGGTTAGAAGTTAGAAGGGGGCTACAGCAGTGTCAGGGCAGTGCACCACCACACTaGAGAGGTCATAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: CLSCLRLEVRRGLQQCQGSAPPH*RGHRPG
Trigger: GCCAGGCCTATGACCTCTGCAGTGTGGTGGTGCACT...GCCCTGACACTGCTGTAGCCCCCTTCTAACTTCTAACCGAAGACAAGACAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp TGTCTGTCTTGTCTTCGGTTAGAAGTTAGAAGGGGGCTACAGCAGTGTCAGGGCTCCATCAAGTCCTTGTaGAGGGTGGGCTCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: CLSCLRLEVRRGLQQCQGSIKSL*RVGSVR
Trigger: CCGGACAGAGCCCACCCTGCACAAGGACTTGATGGA...GCCCTGACACTGCTGTAGCCCCCTTCTAACTTCTAACCGAAGACAAGACAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp GGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACATGTGCCCATCTCGGCTaGTTCAAGTTAACCAGGACA +
Preference number: 4 (lower is better)
Translates to: GRQRPVCAHLGCFKLTRTCAHLG*FKLTRT
Trigger: TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA...TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp TTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTAGGGAAGGAGGGAACAAGGCTTTCAGCTaGTTCTGCCTGGAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: FPEHHQIFPHGEPAREGGNKAFS*FCLEGH
Trigger: GTGCCCTTCCAGGCAGAAGCAGCTGAAAGCCTTGTT...CCCTCCTTCCCTAGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR GCA 90 bp GAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTCACACTGGGCTGCAATaGCAGAACAAGGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: EAKTRVCPSRLLQVNQDTHTGLQ*QNKAFS
Trigger: GCTGAAAGCCTTGTTCTGGCATTGCAGCCCAGTGTG...AGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR CCA 90 bp CACAAGGAACATGAACACCTTTGCAGTAAAATCAGGACTCTAACCACAAGGGGGCAGAAGAGCAGGCGGTaGGGTCCGTCGGGCACACAG +
Preference number: 4 (lower is better)
Translates to: HKEHEHLCSKIRTLTTRGQKSRR*GPSGTQ
Trigger: CTGTGTGCCCGACGGACCCCACCGCCTGCTCTTCTG...CCCCCTTGTGGTTAGAGTCCTGATTTTACTGCAAAGGTGTTCATGTTCCTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CCA 90 bp TGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTATCCAATGGGAGGTGCTaGACCACGCTGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: CAHLGCFKLTRTLGCKVLSNGRC*TTLARA
Trigger: CGCCCTGGCCAGCGTGGTCCAGCACCTCCCATTGGA...TAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp ACCATGCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAGACTGCTTGAGTTTCTaGCAGATCCTTGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: TMQWRLVRGQVSVSVLLRDCLSF*QILVPV
Trigger: AACGGGCACAAGGATCTGCCAGAAACTCAAGCAGTC...TCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGCTCCCCGGAGGGGATaGCAGCATCCGGGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTAPRRG*QHPGGS
Trigger: GGACCCACCCGGATGCTGCCATCCCCTCCGGGGAGC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CCA 90 bp CCATCACAGCCCCTGAGTCCAAGGAAGAACAATCTCTTGCTTAGGCTTACTTTTCCCTCAGGCCCTACCTaGCTCCTGGAGGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: PSQPLSPRKNNLLLRLTFPSGPT*LLEGRG
Trigger: ACCCCTTCCCTCCAGGAGCCAGGTAGGGCCTGAGGG...AAAAGTAAGCCTAAGCAAGAGATTGTTCTTCCTTGGACTCAGGGGCTGTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CCA 90 bp AGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTCCTTTGTGCAAGGCTTaGATCCTGCTGTGCTTTATA +
Preference number: 4 (lower is better)
Translates to: RGLQQCQGTSPNLQVAAVPLCKA*ILLCFI
Trigger: TATAAAGCACAGCAGGATCCAAGCCTTGCACAAAGG...AACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp CACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGCCAACTGCTCAGAGGCTATCCGTAATGTCCTaGGTTCCCACATTGACTCAC +
Preference number: 4 (lower is better)
Translates to: HPTCRWLLLQLQRPTAQRLSVMS*VPTLTH
Trigger: GTGAGTCAATGTGGGAACCCAGGACATTACGGATAG...CCTCTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGCGAGGTGCGTGAAATaGGGCGGAGCCGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTARCVK*GGAGAG
Trigger: CCCCGCTCCGGCTCCGCCCCATTTCACGCACCTCGC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530267.5
CDS-3UTR TCA 90 bp TTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTAGGGAAGGAGGGCACTGTCATCATTGCTaGGGTTCCGGACAACACCAT +
Preference number: 4 (lower is better)
Translates to: FPEHHQIFPHGEPAREGGHCHHC*GSGQHH
Trigger: ATGGTGTTGTCCGGAACCTCAGCAATGATGACAGTG...CCCTCCTTCCCTAGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS-3UTR TCA 90 bp TACCTGGCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGACCTGAAGGATGCTGTTaGCATAGCATGTGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: YLAPGGKGSGWQQVHIRRPEGCC*HSMCCP
Trigger: TGGGCAACACATGCTATGTCAACAGCATCCTTCAGG...TCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGCCAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR TCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGCTGGGTGCCAGGGCTaGACCAGGGCGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTAGCQG*TRASRM
Trigger: CATCCTGGACGCCCTGGTTCAGCCCTGGCACCCAGC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR TCA 90 bp CCATCACAGCCCCTGAGTCCAAGGAAGAACAATCTCTTGCTTAGGCTTACTTTTCCCGGGAGGAGACGTTaGGGCAGCAGAGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: PSQPLSPRKNNLLLRLTFPGRRR*GSRDSR
Trigger: TCTGCTGTCTCTGCTGCCTCAACGTCTCCTCCCGGG...AAAAGTAAGCCTAAGCAAGAGATTGTTCTTCCTTGGACTCAGGGGCTGTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR TCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCGAGAGAGAGGTCCGTaGAGGCCTCCTCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTRERGP*RPPPGR
Trigger: CCTCCCGGGAGGAGGCCTTCACGGACCTCTCTCTCG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR TCA 90 bp GAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTGGGACTGATCCCCAATaGAAGGGACTTAGGTCTTAC +
Preference number: 4 (lower is better)
Translates to: EAKTRVCPSRLLQVNQDTGTDPQ*KGLRSY
Trigger: GTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCC...AGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR TCA 90 bp AGGCTTCCTAAGAGCCCACACTTCACAAGGAACATGAACACCTTTGCAGTAAAACCACCTGCCAGACACTaGGGCTCCCAGCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: RLPKSPHFTRNMNTFAVKPPARH*GSQPTK
Trigger: CTTGGTGGGCTGGGAGCCTCAGTGTCTGGCAGGTGG...TTTTACTGCAAAGGTGTTCATGTTCCTTGTGAAGTGTGGGCTCTTAGGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR TCA 90 bp CACAAGGAACATGAACACCTTTGCAGTAAAATCAGGACTCTAACCACAAGGGGGCCGGGGTCTGTGGGCTaGACCAGACATGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: HKEHEHLCSKIRTLTTRGPGSVG*TRHGWE
Trigger: TTCCCAGCCATGTCTGGTTCAGCCCACAGACCCCGG...CCCCCTTGTGGTTAGAGTCCTGATTTTACTGCAAAGGTGTTCATGTTCCTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR GCA 90 bp GCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAAAGGTAGACGGAAGAGATGCTaGTTCCACTGCAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: AVALGKGAGLGLCSSQKGRRKRC*FHCKIQ
Trigger: CTGGATTTTGCAGTGGAAGCAGCATCTCTTCCGTCT...ACCTTTCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp CTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGAGGAGCCCGCTCACCTaGTGGGCCTGCTCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: LGCFKLTRTLGCKVLMGLRSPLT*WACSRN
Trigger: GTTCCTAGAGCAGGCCCAGCAGGTGAGCGGGCTCCT...CAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp AGGTCTAGCCTGTTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTTGCGCAGGAGATGACTaGGAACAGCTCTTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: RSSLFPEHHQIFPHGEPACAGDD*EQLFEA
Trigger: TGCCTCAAAGAGCTGTTCGCAGTCATCTCCTGCGCA...AGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAACAGGCTAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp CAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGCAGGCCCTTCAGCAGTaGAATGATCCACTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: QCQGTSPNLQVAAVAATKQALQQ*NDPLVN
Trigger: ATTGACAAGTGGATCATTGCACTGCTGAAGGGCCTG...CTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp TTGTGCAAGGCTTGGATCCTGCTGTGCTTTATACCGTACAGCAGTCGGAAGGAATCCTGCCCCAGCAGCTaGTTGATGCGGTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: LCKAWILLCFIPYSSRKESCPSS*LMRSSL
Trigger: CAATGAGGACCGCATCAAGCAGCTGCTGGGGCAGGA...TTCCTTCCGACTGCTGTACGGTATAAAGCACAGCAGGATCCAAGCCTTGCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GACGTTGAGGCAGCAGAGACAGCAGATCCGAGTCACTATCTTGCCTCCAAACATAAGCCAAAGAGCCACTaGAGCTTGGTCATCAGGGGC +
Preference number: 4 (lower is better)
Translates to: DVEAAETADPSHYLASKHKPKSH*SLVIRG
Trigger: GCCCCTGATGACCAAGCTGCAGTGGCTCTTTGGCTT...ATGTTTGGAGGCAAGATAGTGACTCGGATCTGCTGTCTCTGCTGCCTCAACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTCCGAGGACCCACCCTaGCTGGCCCCTGTGCACTGG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTSEDPP*LAPVHW
Trigger: CCAGTGCACAGGGGCCAGGCAGGGTGGGTCCTCGGA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp CACCCAGCCCTCAGTAAGGTAAGTAAGTCAGTCAGTCCACACGTTTACTTACACACCTTCTCGGCATCCTaGAGGGAGGCACACGACTCG +
Preference number: 4 (lower is better)
Translates to: HPALSKVSKSVSPHVYLHTFSAS*REAHDS
Trigger: CGAGTCGTGTGCCTCCCTGCAGGATGCCGAGAAGGT...GTGTAAGTAAACGTGTGGACTGACTGACTTACTTACCTTACTGAGGGCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp GTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTAGTGCACCACCACACTaGAGAGGTCATAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VCAHLGCFKLTRTLGCKVSAPPH*RGHRPG
Trigger: GCCAGGCCTATGACCTCTGCAGTGTGGTGGTGCACT...AACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp TGTCTGTCTTGTCTTCGGTTAGAAGTTAGAAGGGGGCTACAGCAGTGTCAGGGCGAAGACACTCCAGAGTaGACCACCACACTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CLSCLRLEVRRGLQQCQGEDTPE*TTTLQR
Trigger: CCTCTGCAGTGTGGTGGTGCACTCTGGAGTGTCTTC...GCCCTGACACTGCTGTAGCCCCCTTCTAACTTCTAACCGAAGACAAGACAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp CACAAGGAACATGAACACCTTTGCAGTAAAATCAGGACTCTAACCACAAGGGGGAGATGTAGGCCGCCCTaGTCCGGGCCTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HKEHEHLCSKIRTLTTRGRCRPP*SGPPSP
Trigger: AGGAGAAGGAGGCCCGGAGCAGGGCGGCCTACATCT...CCCCCTTGTGGTTAGAGTCCTGATTTTACTGCAAAGGTGTTCATGTTCCTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp AGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGGCTTCCTAAGAGCCCACACGCTTGGATCCTGCTGTaGTTTATACCGTACAGCAGT +
Preference number: 4 (lower is better)
Translates to: SYKGQLLRGAHRLPKSPHAWILL*FIPYSS
Trigger: ACTGCTGTACGGTATAAAGCACAGCAGGATCCAAGC...GTGTGGGCTCTTAGGAAGCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp CAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGCAAGGCTTGGATCCTaGTGTGCTTTATACCGTACA +
Preference number: 4 (lower is better)
Translates to: QCQGTSPNLQVAAVAATKARLGS*CALYRT
Trigger: TGTACGGTATAAAGCACAGCAGGATCCAAGCCTTGC...CTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp GGGCGAGCTGGACTGCTTGAGTTTCTGGCAGATCCTTGTGCCCGTTTTCTCCTCGCAAGGCTTGGATCCTaGTGTGCTTTATACCGTACA +
Preference number: 4 (lower is better)
Translates to: GRAGLLEFLADPCARFLLARLGS*CALYRT
Trigger: TGTACGGTATAAAGCACAGCAGGATCCAAGCCTTGC...GAGGAGAAAACGGGCACAAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR GCA 90 bp CTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGGGGGCAAAGGCCTCCTaGTGTGAGAAGCTAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LGCFKLTRTLGCKVLMGLGAKAS*CEKLAP
Trigger: GGGGGCTAGCTTCTCACAGCAGGAGGCCTTTGCCCC...CAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp TTGTGCAAGGCTTGGATCCTGCTGTGCTTTATACCGTACAGCAGTCGGAAGGAAGCACTTCACCCAACCTaGAGGTGGCTGCTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LCKAWILLCFIPYSSRKEALHPT*RWLLLQ
Trigger: CTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGC...TTCCTTCCGACTGCTGTACGGTATAAAGCACAGCAGGATCCAAGCCTTGCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp AGGTCTAGCCTGTTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTCTGGGCGTGTCTGTCTaGTGCTTTCACAGGTCACTT +
Preference number: 4 (lower is better)
Translates to: RSSLFPEHHQIFPHGEPALGVSV*CFHRSL
Trigger: AAGTGACCTGTGAAAGCAGCAGACAGACACGCCCAG...AGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAACAGGCTAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp GTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTAAGGGACACCCAAAATaGTGGGGTGAGGGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: VCAHLGCFKLTRTLGCKVKGHPK*WGEGSP
Trigger: TGGGCTGCCCTCACCCCAGCATTTTGGGTGTCCCTT...AACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR CCA 90 bp TGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAAGCCCGCTCACCTGCTaGGCCTGCTCTAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: CAHLGCFKLTRTLGCKVLSPLTC*ACSRNS
Trigger: GGAGTTCCTAGAGCAGGCCCAGCAGGTGAGCGGGCT...TAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp CACAAGGAACATGAACACCTTTGCAGTAAAATCAGGACTCTAACCACAAGGGGGCAGGGCGCTAGATGGTaGCTCCTCCTCTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: HKEHEHLCSKIRTLTTRGQGARW*LLLCAG
Trigger: TCCTGCGCAGAGGAGGAGCCACCATCTAGCGCCCTG...CCCCCTTGTGGTTAGAGTCCTGATTTTACTGCAAAGGTGTTCATGTTCCTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CCA 90 bp TGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTACGGAACACCATGCAGTaGACCAGCTCCGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CAHLGCFKLTRTLGCKVLRNTMQ*TSSASC
Trigger: GCAGCTGGCGGAGCTGGTCCACTGCATGGTGTTCCG...TAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp TGTCTGTCTTGTCTTCGGTTAGAAGTTAGAAGGGGGCTACAGCAGTGTCAGGGCGAAATGGCAGGCCGCTaGCTGTGTTCTAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: CLSCLRLEVRRGLQQCQGEMAGR*LCSRKP
Trigger: TGGCTTCCTAGAACACAGCCAGCGGCCTGCCATTTC...GCCCTGACACTGCTGTAGCCCCCTTCTAACTTCTAACCGAAGACAAGACAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCCCCTGTGCACTGGTTaGTGGGGGCAACTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTPLCTG*WGQLPG
Trigger: GCCCGGGAGTTGCCCCCACCAACCAGTGCACAGGGG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTATGGCAGCATCCGGGTaGGTCCCCGCTCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTMAASG*VPAPRL
Trigger: CAGCCTGGGAGCGGGGACCCACCCGGATGCTGCCAT...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CCA 90 bp TGTCTGTCTTGTCTTCGGTTAGAAGTTAGAAGGGGGCTACAGCAGTGTCAGGGCAGGATTGCAGCCCCCTaGAGAGCCTTCATCCTCATC +
Preference number: 4 (lower is better)
Translates to: CLSCLRLEVRRGLQQCQGRIAAP*RAFILI
Trigger: GATGAGGATGAAGGCTCTCCAGGGGGCTGCAATCCT...GCCCTGACACTGCTGTAGCCCCCTTCTAACTTCTAACCGAAGACAAGACAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp AGGTCTAGCCTGTTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTGGGAAGGGGTCAGGTTaGCAGCAGGTTCACATTAGA +
Preference number: 4 (lower is better)
Translates to: RSSLFPEHHQIFPHGEPAGKGSG*QQVHIR
Trigger: TCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCC...AGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAACAGGCTAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp AGGCTTCCTAAGAGCCCACACTTCACAAGGAACATGAACACCTTTGCAGTAAAACCCTCAGGCCCTACCTaGCTCCTGGAGGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: RLPKSPHFTRNMNTFAVKPSGPT*LLEGRG
Trigger: ACCCCTTCCCTCCAGGAGCCAGGTAGGGCCTGAGGG...TTTTACTGCAAAGGTGTTCATGTTCCTTGTGAAGTGTGGGCTCTTAGGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp TTGTGCAAGGCTTGGATCCTGCTGTGCTTTATACCGTACAGCAGTCGGAAGGAACTCGCCCCTCCACACTaGGCTGCAATGCCAGAACAA +
Preference number: 4 (lower is better)
Translates to: LCKAWILLCFIPYSSRKELAPPH*AAMPEQ
Trigger: TTGTTCTGGCATTGCAGCCCAGTGTGGAGGGGCGAG...TTCCTTCCGACTGCTGTACGGTATAAAGCACAGCAGGATCCAAGCCTTGCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526425.1
3UTR CAA 72 bp ACAGATTCGAAGGAAGAGAAGGACACCCGAGTGTCATaGAACAGGTACCACTGGTTCTCGGGCTCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: TDSKEEKDTRVS*NRYHWFSGSGL
Trigger: TAGGCCAGAGCCCGAGAACCAGTGGTACCTGTTCAATGACACTCGGGTGTCCTTCTCTTCCTTCGAATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR TCA 90 bp TGGGTATTTTTCTTGGCTGTGAATAAGAACAAATGCTCTCTACCTCAGCGTCTGGCACGCGACGCGCGCTaGAGAACTCGGCGAAGACGT +
Preference number: 4 (lower is better)
Translates to: WVFFLAVNKNKCSLPQRLARDAR*RTRRRR
Trigger: ACGTCTTCGCCGAGTTCTTCAGCGCGCGTCGCGTGC...CAGACGCTGAGGTAGAGAGCATTTGTTCTTATTCACAGCCAAGAAAAATACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR TCA 90 bp AGGTCTAGCCTGTTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTCACTGTCATCATTGCTaGGGTTCCGGACAACACCAT +
Preference number: 4 (lower is better)
Translates to: RSSLFPEHHQIFPHGEPAHCHHC*GSGQHH
Trigger: ATGGTGTTGTCCGGAACCTCAGCAATGATGACAGTG...AGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAACAGGCTAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS-3UTR TCA 90 bp TGTCTGTCTTGTCTTCGGTTAGAAGTTAGAAGGGGGCTACAGCAGTGTCAGGGCTCAGGAGCATGTACTTaGGCACAGACAAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: CLSCLRLEVRRGLQQCQGSGACT*AQTRQL
Trigger: GAGCTGCCTTGTCTGTGCTCAAGTACATGCTCCTGA...GCCCTGACACTGCTGTAGCCCCCTTCTAACTTCTAACCGAAGACAAGACAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR TCA 90 bp AGGTCTAGCCTGTTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTACACCCGAGTGTCATTaGACAGGTACCACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: RSSLFPEHHQIFPHGEPATPECH*TGTTGS
Trigger: AGAACCAGTGGTACCTGTTCAATGACACTCGGGTGT...AGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAACAGGCTAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR TCA 90 bp GAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTCAAAACATTGGAGCTaGGGTCTAGCCTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: EAKTRVCPSRLLQVNQDTSKHWS*GLACFL
Trigger: CAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGA...AGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp AGGCTTCCTAAGAGCCCACACTTCACAAGGAACATGAACACCTTTGCAGTAAAACGCCGAACCAGCCCCTaGTTCACGCTGACCGGGTAT +
Preference number: 4 (lower is better)
Translates to: RLPKSPHFTRNMNTFAVKRRTSP*FTLTGY
Trigger: ATACCCGGTCAGCGTGAAGCAGGGGCTGGTTCGGCG...TTTTACTGCAAAGGTGTTCATGTTCCTTGTGAAGTGTGGGCTCTTAGGAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp GTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTAAGCCAAAGAGCCACTaGAGCTTGGTCATCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VCAHLGCFKLTRTLGCKVKPKSH*SLVIRG
Trigger: GCCCCTGATGACCAAGCTGCAGTGGCTCTTTGGCTT...AACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp TTGTGCAAGGCTTGGATCCTGCTGTGCTTTATACCGTACAGCAGTCGGAAGGAAGAGGGCGAGCTGGACTaGTTGAGTTTCTGGCAGATC +
Preference number: 4 (lower is better)
Translates to: LCKAWILLCFIPYSSRKEEGELD*LSFWQI
Trigger: GATCTGCCAGAAACTCAAGCAGTCCAGCTCGCCCTC...TTCCTTCCGACTGCTGTACGGTATAAAGCACAGCAGGATCCAAGCCTTGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GTACTTGATGTCAAAACATTGGAGCTGAGGTCTAGCCTGTTTCCTGAACATCATCCTGCCTGGCCCCTGTaGACTGGTTGGTGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: VLDVKTLELRSSLFPEHHPAWPL*TGWWGQ
Trigger: TTGCCCCCACCAACCAGTGCACAGGGGCCAGGCAGG...ATGATGTTCAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCCTGCCTGGCCCCTGTaGACTGGTTGGTGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTPAWPL*TGWWGQ
Trigger: TTGCCCCCACCAACCAGTGCACAGGGGCCAGGCAGG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATTCCGAGGACCCACCCTaGCTGGCCCCTGTGCACTGG +
Preference number: 4 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNSEDPP*LAPVHW
Trigger: CCAGTGCACAGGGGCCAGGCAGGGTGGGTCCTCGGA...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp CACAAGGAACATGAACACCTTTGCAGTAAAATCAGGACTCTAACCACAAGGGGGCGGAGATGTGGGGAGTaGAGAGATGTAGGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: HKEHEHLCSKIRTLTTRGRRCGE*RDVGRP
Trigger: AGGGCGGCCTACATCTCTGCACTCCCCACATCTCCG...CCCCCTTGTGGTTAGAGTCCTGATTTTACTGCAAAGGTGTTCATGTTCCTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp CACAAGGAACATGAACACCTTTGCAGTAAAATCAGGACTCTAACCACAAGGGGGTGCCACCTGCAGGATTaGAGCCCCCTGGAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: HKEHEHLCSKIRTLTTRGCHLQD*SPLESL
Trigger: AAGGCTCTCCAGGGGGCTGCAATCCTGCAGGTGGCA...CCCCCTTGTGGTTAGAGTCCTGATTTTACTGCAAAGGTGTTCATGTTCCTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp TTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTAGGGAAGGAGGGGCTTGGATCCTGCTGTaGTTTATACCGTACAGCAGT +
Preference number: 4 (lower is better)
Translates to: FPEHHQIFPHGEPAREGGAWILL*FIPYSS
Trigger: ACTGCTGTACGGTATAAAGCACAGCAGGATCCAAGC...CCCTCCTTCCCTAGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp CTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGAACACAGCCTGCCTGTaGGGGCTGAGCACACAGCTG +
Preference number: 4 (lower is better)
Translates to: LGCFKLTRTLGCKVLMGLNTACL*GLSTQL
Trigger: CAGCTGTGTGCTCAGCCCGCACAGGCAGGCTGTGTT...CAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR CCA 90 bp GTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTATCCATGAGCTCCAATaGGAGGTGCTGGACCACGCT +
Preference number: 4 (lower is better)
Translates to: VCAHLGCFKLTRTLGCKVIHELQ*EVLDHA
Trigger: AGCGTGGTCCAGCACCTCCCATTGGAGCTCATGGAT...AACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp GTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTGCTTCGTGGGAGTGCTaGAAGGTCAGGAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: VCAHLGCFKLTRTLGCKVASWEC*KVRSMY
Trigger: GTACATGCTCCTGACCTTCCAGCACTCCCACGAAGC...AACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp TGTCTGTCTTGTCTTCGGTTAGAAGTTAGAAGGGGGCTACAGCAGTGTCAGGGCTCCTCATTGGGAACATaGAGGTCCTTGATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CLSCLRLEVRRGLQQCQGSSLGT*RSLMAS
Trigger: GGAGGCCATCAAGGACCTCCATGTTCCCAATGAGGA...GCCCTGACACTGCTGTAGCCCCCTTCTAACTTCTAACCGAAGACAAGACAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCTGGCCCCTGTGCACTaGTTGGTGGGGGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTLAPVH*LVGATP
Trigger: GGGAGTTGCCCCCACCAACCAGTGCACAGGGGCCAG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CCA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATATGGCAGCATCCGGGTaGGTCCCCGCTCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNMAASG*VPAPRL
Trigger: CAGCCTGGGAGCGGGGACCCACCCGGATGCTGCCAT...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp AGGCTTCCTAAGAGCCCACACTTCACAAGGAACATGAACACCTTTGCAGTAAAAGCCCTACCTGGCTCCTaGAGGGAAGGGGTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RLPKSPHFTRNMNTFAVKALPGS*REGVRL
Trigger: CAACCTGACCCCTTCCCTCCAGGAGCCAGGTAGGGC...TTTTACTGCAAAGGTGTTCATGTTCCTTGTGAAGTGTGGGCTCTTAGGAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCCCTCAGGCCCTACCTaGCTCCTGGAGGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTPSGPT*LLEGRG
Trigger: ACCCCTTCCCTCCAGGAGCCAGGTAGGGCCTGAGGG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CCA 90 bp GGGCGAGCTGGACTGCTTGAGTTTCTGGCAGATCCTTGTGCCCGTTTTCTCCTCCCTTTGTGCAAGGCTTaGATCCTGCTGTGCTTTATA +
Preference number: 4 (lower is better)
Translates to: GRAGLLEFLADPCARFLLPLCKA*ILLCFI
Trigger: TATAAAGCACAGCAGGATCCAAGCCTTGCACAAAGG...GAGGAGAAAACGGGCACAAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCTGCGGGATGAAGCATaGGGAGGGGCGAGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTLRDEA*GGARCV
Trigger: CACGCACCTCGCCCCTCCCCATGCTTCATCCCGCAG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530267.5
CDS-3UTR TCA 90 bp CACAAGGAACATGAACACCTTTGCAGTAAAATCAGGACTCTAACCACAAGGGGGTGTCTGACTTGGCCATaGGCCGGGGATAGAAACCCG +
Preference number: 4 (lower is better)
Translates to: HKEHEHLCSKIRTLTTRGCLTWP*AGDRNP
Trigger: CGGGTTTCTATCCCCGGCTCATGGCCAAGTCAGACA...CCCCCTTGTGGTTAGAGTCCTGATTTTACTGCAAAGGTGTTCATGTTCCTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR TCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCCCGGGAGGAGACGTTaGGGCAGCAGAGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTPGRRR*GSRDSR
Trigger: TCTGCTGTCTCTGCTGCCTCAACGTCTCCTCCCGGG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR TCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGCAACTCCCGGGCTGTaGTGTCTTCTGTGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTATPGL*CLLWGA
Trigger: TGCGCCCCACAGAAGACATCACAGCCCGGGAGTTGC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp GTACTTGATGTCAAAACATTGGAGCTGAGGTCTAGCCTGTTTCCTGAACATCATTGCGGCGCCGCATGGTaGGCAGGTCGAAAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VLDVKTLELRSSLFPEHHCGAAW*AGRKRS
Trigger: GCTTCTCTTTCGACCTGCGCACCATGCGGCGCCGCA...ATGATGTTCAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTGCGGCGCCGCATGGTaGGCAGGTCGAAAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTCGAAW*AGRKRS
Trigger: GCTTCTCTTTCGACCTGCGCACCATGCGGCGCCGCA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCGTCATCCAGGATCTTaGGGCGCCGCATGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTRHPGS*GAAWCA
Trigger: TGCGCACCATGCGGCGCCGCAAGATCCTGGATGACG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTAGATGTAGGCCGCCCTaGTCCGGGCCTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTRCRPP*SGPPSP
Trigger: AGGAGAAGGAGGCCCGGAGCAGGGCGGCCTACATCT...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp GGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGGAACATGAACACCTTTaGAGTAAAATCAGGACTCTA +
Preference number: 4 (lower is better)
Translates to: GYSSVRALHPTCRWLLLQEHEHL*SKIRTL
Trigger: TAGAGTCCTGATTTTACTGCAAAGGTGTTCATGTTC...CTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp TGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAGCTACAAAGGCCAACTaGTCAGAGGAGCCCACAGGC +
Preference number: 4 (lower is better)
Translates to: CAHLGCFKLTRTLGCKVLATKAN*SEEPTG
Trigger: GCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGC...TAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp CCATCACAGCCCCTGAGTCCAAGGAAGAACAATCTCTTGCTTAGGCTTACTTTTGCACTTCACCCAACCTaGAGGTGGCTGCTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: PSQPLSPRKNNLLLRLTFALHPT*RWLLLQ
Trigger: CTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGC...AAAAGTAAGCCTAAGCAAGAGATTGTTCTTCCTTGGACTCAGGGGCTGTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAGCTGCCTCCCAGGTaGATCCTCTCCACGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNELPPR*ILSTGS
Trigger: GCTGCCCGTGGAGAGGATGCACCTGGGAGGCAGCTC...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCGGAACACCATGCAGTaGACCAGCTCCGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTRNTMQ*TSSASC
Trigger: GCAGCTGGCGGAGCTGGTCCACTGCATGGTGTTCCG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp TGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAGGAGAGGAAGTTCTCTaGGGAAATGGCAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: CAHLGCFKLTRTLGCKVLGEEVL*GNGRPL
Trigger: CAGCGGCCTGCCATTTCCCCAGAGAACTTCCTCTCC...TAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCTGTGCACTGGTTGGTaGGGGCAACTCCCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTLCTGW*GQLPGC
Trigger: ACAGCCCGGGAGTTGCCCCCACCAACCAGTGCACAG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CCA 90 bp CACAAGGAACATGAACACCTTTGCAGTAAAATCAGGACTCTAACCACAAGGGGGGGAGCAGCAGGGGGATaGAGACGTCATCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: HKEHEHLCSKIRTLTTRGGAAGG*RRHPGS
Trigger: AGATCCTGGATGACGTCTCCATCCCCCTGCTGCTCC...CCCCCTTGTGGTTAGAGTCCTGATTTTACTGCAAAGGTGTTCATGTTCCTTGTG
51% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp GGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGAAAGGATGTTGTCTTTaGAAATGGCTTCCATCAAGT +
Preference number: 4 (lower is better)
Translates to: GYSSVRALHPTCRWLLLQKGCCL*KWLPSS
Trigger: ACTTGATGGAAGCCATTTCCAAAGACAACATCCTTT...CTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp GTACTTGATGTCAAAACATTGGAGCTGAGGTCTAGCCTGTTTCCTGAACATCATGAAGGGCACTGCCCCTaGGCCAGAAGCTTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: VLDVKTLELRSSLFPEHHEGHCP*ARSFGS
Trigger: GGAGCCAAAGCTTCTGGCCCAGGGGCAGTGCCCTTC...ATGATGTTCAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR CCA 90 bp GTACTTGATGTCAAAACATTGGAGCTGAGGTCTAGCCTGTTTCCTGAACATCATTCAGCTGCTTCTGCCTaGAAGGGCACTGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VLDVKTLELRSSLFPEHHSAASA*KGTAPG
Trigger: CCCAGGGGCAGTGCCCTTCCAGGCAGAAGCAGCTGA...ATGATGTTCAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526425.1
3UTR CAA 72 bp GTCTGCTGCTTTCACAGGTCACTTAGATGTGACATCTaGAGGGTCTGTGACATTGGGCCCAAACTCCACACC +
Preference number: 4 (lower is better)
Translates to: VCCFHRSLRCDI*RVCDIGPKLHT
Trigger: GGTGTGGAGTTTGGGCCCAATGTCACAGACCCTCAAGATGTCACATCTAAGTGACCTGTGAAAGCAGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR TCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGCCCCAGCAGCTGCTTaGTGCGGTCCTCATTGGGAA +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTAPAAA*CGPHWE
Trigger: TTCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR TCA 90 bp GTACTTGATGTCAAAACATTGGAGCTGAGGTCTAGCCTGTTTCCTGAACATCATAATCTTGCCCGTGTCTaGCTTGGCCATGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: VLDVKTLELRSSLFPEHHNLARV*LGHEPG
Trigger: CCCCGGCTCATGGCCAAGTCAGACACGGGCAAGATT...ATGATGTTCAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR TCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTAATCTTGCCCGTGTCTaGCTTGGCCATGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTNLARV*LGHEPG
Trigger: CCCCGGCTCATGGCCAAGTCAGACACGGGCAAGATT...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR TCA 90 bp GTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTACACCCGAGTGTCATTaGACAGGTACCACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: VCAHLGCFKLTRTLGCKVTPECH*TGTTGS
Trigger: AGAACCAGTGGTACCTGTTCAATGACACTCGGGTGT...AACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp TGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAAAGGCTTCGTGGGAGTaGTGGAAGGTCAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: CAHLGCFKLTRTLGCKVLKASWE*WKVRSM
Trigger: CATGCTCCTGACCTTCCAGCACTCCCACGAAGCCTT...TAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp TGGGTATTTTTCTTGGCTGTGAATAAGAACAAATGCTCTCTACCTCAGCGTCTGGGAACCGGAACACCATaGAGTGGACCAGCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: WVFFLAVNKNKCSLPQRLGTGTP*SGPAPP
Trigger: TGGCGGAGCTGGTCCACTGCATGGTGTTCCGGTTCC...CAGACGCTGAGGTAGAGAGCATTTGTTCTTATTCACAGCCAAGAAAAATACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGCCAGCTCGCTCTTCTaGGAAGTCCAGGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTASSLF*EVQASC
Trigger: GCAGGATGCCTGGACTTCGCAGAAGAGCGAGCTGGC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCCAGGGCGTCCAGGATaGGGAGAGGAAGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTPGRPG*GEEVLW
Trigger: CCAGAGAACTTCCTCTCCGCATCCTGGACGCCCTGG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTACTCCGAGCAGTCCTaGTGGGTGCCAGGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTYSEQS*WVPGLN
Trigger: GTTCAGCCCTGGCACCCAGCAGGACTGCTCGGAGTA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp CCATCACAGCCCCTGAGTCCAAGGAAGAACAATCTCTTGCTTAGGCTTACTTTTATGCAGTGTTTCCTTTaGCTCCGAGGACCCACCCTG +
Preference number: 4 (lower is better)
Translates to: PSQPLSPRKNNLLLRLTFMQCFL*LRGPTL
Trigger: CAGGGTGGGTCCTCGGAGGCAAAGGAAACACTGCAT...AAAAGTAAGCCTAAGCAAGAGATTGTTCTTCCTTGGACTCAGGGGCTGTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp TGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTATCCTTTCCTCCTGACTaGTCTGCCCACCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: CAHLGCFKLTRTLGCKVLSFPPD*SAHQLP
Trigger: AGGAAGCTGGTGGGCAGAGCAGTCAGGAGGAAAGGA...TAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTACCTTCTCGGCATCCTaGAGGGAGGCACACGACTCG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTTFSAS*REAHDS
Trigger: CGAGTCGTGTGCCTCCCTGCAGGATGCCGAGAAGGT...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCGGAGATGTGGGGAGTaGAGAGATGTAGGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTRRCGE*RDVGRP
Trigger: AGGGCGGCCTACATCTCTGCACTCCCCACATCTCCG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTGCCACCTGCAGGATTaGAGCCCCCTGGAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTCHLQD*SPLESL
Trigger: AAGGCTCTCCAGGGGGCTGCAATCCTGCAGGTGGCA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp GTACTTGATGTCAAAACATTGGAGCTGAGGTCTAGCCTGTTTCCTGAACATCATACCACCATTGCCACCTaGAGGATTGCAGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VLDVKTLELRSSLFPEHHTTIAT*RIAAPW
Trigger: CCAGGGGGCTGCAATCCTGCAGGTGGCAATGGTGGT...ATGATGTTCAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTACCACCATTGCCACCTaGAGGATTGCAGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTTTIAT*RIAAPW
Trigger: CCAGGGGGCTGCAATCCTGCAGGTGGCAATGGTGGT...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp CTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGGGAAGTCACCACCATTaGCACCTGCAGGATTGCAGC +
Preference number: 4 (lower is better)
Translates to: LGCFKLTRTLGCKVLMGLGSHHH*HLQDCS
Trigger: GCTGCAATCCTGCAGGTGGCAATGGTGGTGACTTCC...CAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTGTGCCCATCTCGGCTaGTTCAAGTTAACCAGGACA +
Preference number: 4 (lower is better)
Translates to: VCAHLGCFKLTRTLGCKVCAHLG*FKLTRT
Trigger: TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA...AACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp TTGTGCAAGGCTTGGATCCTGCTGTGCTTTATACCGTACAGCAGTCGGAAGGAAGGCGTGTCTGTCTGCTaGTTTCACAGGTCACTTAGA +
Preference number: 4 (lower is better)
Translates to: LCKAWILLCFIPYSSRKEGVSVC*FHRSLR
Trigger: TCTAAGTGACCTGTGAAAGCAGCAGACAGACACGCC...TTCCTTCCGACTGCTGTACGGTATAAAGCACAGCAGGATCCAAGCCTTGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp TGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTACCCTCCACACTGGGCTaGAATGCCAGAACAAGGCTT +
Preference number: 4 (lower is better)
Translates to: CAHLGCFKLTRTLGCKVLPSTLG*NARTRL
Trigger: AAGCCTTGTTCTGGCATTGCAGCCCAGTGTGGAGGG...TAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR CCA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATCAGGGCGCTAGATGGTaGCTCCTCCTCTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNQGARW*LLLCAG
Trigger: TCCTGCGCAGAGGAGGAGCCACCATCTAGCGCCCTG...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp AGGCTTCCTAAGAGCCCACACTTCACAAGGAACATGAACACCTTTGCAGTAAAAAGGTGGAAGGCTTCGTaGGAGTGCTGGAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RLPKSPHFTRNMNTFAVKRWKAS*ECWKVR
Trigger: CCTGACCTTCCAGCACTCCCACGAAGCCTTCCACCT...TTTTACTGCAAAGGTGTTCATGTTCCTTGTGAAGTGTGGGCTCTTAGGAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATGCTGCTCCAGGCAGCTaGTCCCCGAGTTCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNAAPGS*SPSSSP
Trigger: AGGACTCGAACTCGGGGACCAGCTGCCTGGAGCAGC...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTCTTGCGGCGCCGCATaGTGCGCAGGTCGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTSCGAA*CAGRKR
Trigger: TCTCTTTCGACCTGCGCACCATGCGGCGCCGCAAGA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CCA 90 bp TGGGTATTTTTCTTGGCTGTGAATAAGAACAAATGCTCTCTACCTCAGCGTCTGCTGGTTCTCGGGCTCTaGCCTATCGGCAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: WVFFLAVNKNKCSLPQRLLVLGL*PIGSSQ
Trigger: CTGGGAACTGCCGATAGGCCAGAGCCCGAGAACCAG...CAGACGCTGAGGTAGAGAGCATTTGTTCTTATTCACAGCCAAGAAAAATACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCTGGTTCTCGGGCTCTaGCCTATCGGCAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTLVLGL*PIGSSQ
Trigger: CTGGGAACTGCCGATAGGCCAGAGCCCGAGAACCAG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CCA 90 bp AGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGGCTTCCTAAGAGCCCACACTGTTGTCTTTGGAAATaGCTTCCATCAAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SYKGQLLRGAHRLPKSPHCCLWK*LPSSPC
Trigger: ACAAGGACTTGATGGAAGCCATTTCCAAAGACAACA...GTGTGGGCTCTTAGGAAGCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp AGGCTTCCTAAGAGCCCACACTTCACAAGGAACATGAACACCTTTGCAGTAAAACCCAGTGCGGAGATGTaGGGAGTGCAGAGATGTAGG +
Preference number: 4 (lower is better)
Translates to: RLPKSPHFTRNMNTFAVKPSAEM*GVQRCR
Trigger: CCTACATCTCTGCACTCCCCACATCTCCGCACTGGG...TTTTACTGCAAAGGTGTTCATGTTCCTTGTGAAGTGTGGGCTCTTAGGAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp CTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGAGGATTGCAGCCCCCTaGAGAGCCTTCATCCTCATC +
Preference number: 4 (lower is better)
Translates to: LGCFKLTRTLGCKVLMGLRIAAP*RAFILI
Trigger: GATGAGGATGAAGGCTCTCCAGGGGGCTGCAATCCT...CAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp CACAAGGAACATGAACACCTTTGCAGTAAAATCAGGACTCTAACCACAAGGGGGATGTATCAGCCCCTCTaGACCCCACAACACAGCCTG +
Preference number: 4 (lower is better)
Translates to: HKEHEHLCSKIRTLTTRGMYQPL*TPQHSL
Trigger: CAGGCTGTGTTGTGGGGTCCAGAGGGGCTGATACAT...CCCCCTTGTGGTTAGAGTCCTGATTTTACTGCAAAGGTGTTCATGTTCCTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTCCTCATTGGGAACATaGAGGTCCTCCCGGACCCCG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTSSLGT*RSSRTP
Trigger: CGGGGTCCGGGAGGACCTCCATGTTCCCAATGAGGA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530267.5
CDS-3UTR TCA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATGCCCCAGCAGCTGCTTaGTGCGGTCCTCATTGGGAA +
Preference number: 4 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNAPAAA*CGPHWE
Trigger: TTCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGC...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR TCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTGTCTGACTTGGCCATaGGCCGGGGATAGAAACCCG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTCLTWP*AGDRNP
Trigger: CGGGTTTCTATCCCCGGCTCATGGCCAAGTCAGACA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR TCA 90 bp GTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAGATGTGACATCTTaGGGGTCTGTGACATTGGGC +
Preference number: 4 (lower is better)
Translates to: VCAHLGCFKLTRTLGCKVLDVTS*GSVTLG
Trigger: GCCCAATGTCACAGACCCTCAAGATGTCACATCTAA...AACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR TCA 90 bp TGTCTGTCTTGTCTTCGGTTAGAAGTTAGAAGGGGGCTACAGCAGTGTCAGGGCGGTCGTATTCACCATTaGGCAGGATATTCCATCAAC +
Preference number: 4 (lower is better)
Translates to: CLSCLRLEVRRGLQQCQGGRIHH*AGYSIN
Trigger: GTTGATGGAATATCCTGCTCAATGGTGAATACGACC...GCCCTGACACTGCTGTAGCCCCCTTCTAACTTCTAACCGAAGACAAGACAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR GCA 90 bp GTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTCAGGCCCTTCAGCAGTaGAATGATCCACTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: VCAHLGCFKLTRTLGCKVQALQQ*NDPLVN
Trigger: ATTGACAAGTGGATCATTGCACTGCTGAAGGGCCTG...AACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTCCTGCCCCAGCAGCTaGTTGATGCGGTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTSCPSS*LMRSSL
Trigger: CAATGAGGACCGCATCAAGCAGCTGCTGGGGCAGGA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp GTACTTGATGTCAAAACATTGGAGCTGAGGTCTAGCCTGTTTCCTGAACATCATGAAGTCCAGGCATCCTaGCCCAGCAGCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: VLDVKTLELRSSLFPEHHEVQAS*PSSCLM
Trigger: CATCAAGCAGCTGCTGGGGCAGGATGCCTGGACTTC...ATGATGTTCAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGAAGTCCAGGCATCCTaGCCCAGCAGCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTEVQAS*PSSCLM
Trigger: CATCAAGCAGCTGCTGGGGCAGGATGCCTGGACTTC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp AGGCTTCCTAAGAGCCCACACTTCACAAGGAACATGAACACCTTTGCAGTAAAAAAGCCAAAGAGCCACTaGAGCTTGGTCATCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RLPKSPHFTRNMNTFAVKKPKSH*SLVIRG
Trigger: GCCCCTGATGACCAAGCTGCAGTGGCTCTTTGGCTT...TTTTACTGCAAAGGTGTTCATGTTCCTTGTGAAGTGTGGGCTCTTAGGAAGCCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR GCA 90 bp TGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAGTAGTAGCGGTTTTCTaGTGTCAGCTTCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: CAHLGCFKLTRTLGCKVLVVAVF*CQLLGG
Trigger: TCCCCCGAGAAGCTGACAGCAGAAAACCGCTACTAC...TAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATACCTTCTCGGCATCCTaGAGGGAGGCACACGACTCG +
Preference number: 4 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNTFSAS*REAHDS
Trigger: CGAGTCGTGTGCCTCCCTGCAGGATGCCGAGAAGGT...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTAGTGCACCACCACACTaGAGAGGTCATAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTSAPPH*RGHRPG
Trigger: GCCAGGCCTATGACCTCTGCAGTGTGGTGGTGCACT...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp GTACTTGATGTCAAAACATTGGAGCTGAGGTCTAGCCTGTTTCCTGAACATCATTCCATCAAGTCCTTGTaGAGGGTGGGCTCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: VLDVKTLELRSSLFPEHHSIKSL*RVGSVR
Trigger: CCGGACAGAGCCCACCCTGCACAAGGACTTGATGGA...ATGATGTTCAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTCCATCAAGTCCTTGTaGAGGGTGGGCTCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTSIKSL*RVGSVR
Trigger: CCGGACAGAGCCCACCCTGCACAAGGACTTGATGGA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATCGGAGATGTGGGGAGTaGAGAGATGTAGGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNRRCGE*RDVGRP
Trigger: AGGGCGGCCTACATCTCTGCACTCCCCACATCTCCG...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp TTGTGCAAGGCTTGGATCCTGCTGTGCTTTATACCGTACAGCAGTCGGAAGGAAGCAAGGCTTGGATCCTaGTGTGCTTTATACCGTACA +
Preference number: 4 (lower is better)
Translates to: LCKAWILLCFIPYSSRKEARLGS*CALYRT
Trigger: TGTACGGTATAAAGCACAGCAGGATCCAAGCCTTGC...TTCCTTCCGACTGCTGTACGGTATAAAGCACAGCAGGATCCAAGCCTTGCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACAGAACATGAACACCTTTaGAGTAAAATCAGGACTCTA +
Preference number: 4 (lower is better)
Translates to: GRQRPVCAHLGCFKLTRTEHEHL*SKIRTL
Trigger: TAGAGTCCTGATTTTACTGCAAAGGTGTTCATGTTC...TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGGAGAGGAAGTTCTCTaGGGAAATGGCAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTGEEVL*GNGRPL
Trigger: CAGCGGCCTGCCATTTCCCCAGAGAACTTCCTCTCC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGCCCACCAGCTTCCTTaGAGTCCAGGCCTTCGATGT +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTAHQLP*SPGLRC
Trigger: ACATCGAAGGCCTGGACTCCAAGGAAGCTGGTGGGC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGGAGCAGCAGGGGGATaGAGACGTCATCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTGAAGG*RRHPGS
Trigger: AGATCCTGGATGACGTCTCCATCCCCCTGCTGCTCC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CCA 90 bp CCATCACAGCCCCTGAGTCCAAGGAAGAACAATCTCTTGCTTAGGCTTACTTTTTTGAACAGGTACCACTaGTTCTCGGGCTCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: PSQPLSPRKNNLLLRLTFLNRYH*FSGSGL
Trigger: TAGGCCAGAGCCCGAGAACCAGTGGTACCTGTTCAA...AAAAGTAAGCCTAAGCAAGAGATTGTTCTTCCTTGGACTCAGGGGCTGTGATGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCCCAGTGCGGAGATGTaGGGAGTGCAGAGATGTAGG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTPSAEM*GVQRCR
Trigger: CCTACATCTCTGCACTCCCCACATCTCCGCACTGGG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CCA 90 bp CTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGGGGAAGGGGTCAGGTTaGCAGCAGGTTCACATTAGA +
Preference number: 4 (lower is better)
Translates to: LGCFKLTRTLGCKVLMGLGKGSG*QQVHIR
Trigger: TCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCC...CAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp CCATCACAGCCCCTGAGTCCAAGGAAGAACAATCTCTTGCTTAGGCTTACTTTTTCTAGAGATGGGTTCTaGGCGTGTCTGTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PSQPLSPRKNNLLLRLTFSRDGF*ACLSAA
Trigger: AGCAGCAGACAGACACGCCCAGAACCCATCTCTAGA...AAAAGTAAGCCTAAGCAAGAGATTGTTCTTCCTTGGACTCAGGGGCTGTGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR TCA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATTGTCTGACTTGGCCATaGGCCGGGGATAGAAACCCG +
Preference number: 4 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNCLTWP*AGDRNP
Trigger: CGGGTTTCTATCCCCGGCTCATGGCCAAGTCAGACA...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR TCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGGTCATCAGGGGCTGTaGGTTGTTCTCAGTCAAGCG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTGHQGL*VVLSQA
Trigger: CGCTTGACTGAGAACAACTCACAGCCCCTGATGACC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR TCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGCGAGCTGGACTGCTTaGGTTTCTGGCAGATCCTTG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTASWTA*VSGRSL
Trigger: CAAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR TCA 90 bp AGGCTTCCTAAGAGCCCACACTTCACAAGGAACATGAACACCTTTGCAGTAAAAAGGACTAAGGTGCCATaGGCTGTACCATCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RLPKSPHFTRNMNTFAVKRTKVP*AVPSFL
Trigger: GAGGAAGGATGGTACAGCTCATGGCACCTTAGTCCT...TTTTACTGCAAAGGTGTTCATGTTCCTTGTGAAGTGTGGGCTCTTAGGAAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR TCA 90 bp TGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAGGGACTGATCCCCAATaGAAGGGACTTAGGTCTTAC +
Preference number: 4 (lower is better)
Translates to: CAHLGCFKLTRTLGCKVLGTDPQ*KGLRSY
Trigger: GTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCC...TAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTAAGCCAAAGAGCCACTaGAGCTTGGTCATCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTKPKSH*SLVIRG
Trigger: GCCCCTGATGACCAAGCTGCAGTGGCTCTTTGGCTT...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGAGGGCGAGCTGGACTaGTTGAGTTTCTGGCAGATC +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTEGELD*LSFWQI
Trigger: GATCTGCCAGAAACTCAAGCAGTCCAGCTCGCCCTC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTATGCAGTGTTTCCTTTaGCTCCGAGGACCCACCCTG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTMQCFL*LRGPTL
Trigger: CAGGGTGGGTCCTCGGAGGCAAAGGAAACACTGCAT...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTCCTTTCCTCCTGACTaGTCTGCCCACCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTSFPPD*SAHQLP
Trigger: AGGAAGCTGGTGGGCAGAGCAGTCAGGAGGAAAGGA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp TGGGTATTTTTCTTGGCTGTGAATAAGAACAAATGCTCTCTACCTCAGCGTCTGGAAGACACTCCAGAGTaGACCACCACACTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: WVFFLAVNKNKCSLPQRLEDTPE*TTTLQR
Trigger: CCTCTGCAGTGTGGTGGTGCACTCTGGAGTGTCTTC...CAGACGCTGAGGTAGAGAGCATTTGTTCTTATTCACAGCCAAGAAAAATACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGAAGACACTCCAGAGTaGACCACCACACTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTEDTPE*TTTLQR
Trigger: CCTCTGCAGTGTGGTGGTGCACTCTGGAGTGTCTTC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp GTACTTGATGTCAAAACATTGGAGCTGAGGTCTAGCCTGTTTCCTGAACATCATGGAAGTCACCACCATTaGCACCTGCAGGATTGCAGC +
Preference number: 4 (lower is better)
Translates to: VLDVKTLELRSSLFPEHHGSHHH*HLQDCS
Trigger: GCTGCAATCCTGCAGGTGGCAATGGTGGTGACTTCC...ATGATGTTCAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGGAAGTCACCACCATTaGCACCTGCAGGATTGCAGC +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTGSHHH*HLQDCS
Trigger: GCTGCAATCCTGCAGGTGGCAATGGTGGTGACTTCC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp TGTCTGTCTTGTCTTCGGTTAGAAGTTAGAAGGGGGCTACAGCAGTGTCAGGGCGTGAATAAGAACAAATaGTCTCTACCTCAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: CLSCLRLEVRRGLQQCQGVNKNK*SLPQRL
Trigger: CAGACGCTGAGGTAGAGAGCATTTGTTCTTATTCAC...GCCCTGACACTGCTGTAGCCCCCTTCTAACTTCTAACCGAAGACAAGACAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGACATGGCTGGGAAATaGACAAGCCCAGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTDMAGK*TSPAQP
Trigger: TGGCTGTGCTGGGCTTGTGCATTTCCCAGCCATGTC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTCTTCCCACCCCGCCTaGCACAAGCCTCTATGTATC +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTSSHPA*HKPLCI
Trigger: GATACATAGAGGCTTGTGCCAGGCGGGGTGGGAAGA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530267.5
CDS-3UTR CCA 90 bp GTACTTGATGTCAAAACATTGGAGCTGAGGTCTAGCCTGTTTCCTGAACATCATGCTTCGTGGGAGTGCTaGAAGGTCAGGAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: VLDVKTLELRSSLFPEHHASWEC*KVRSMY
Trigger: GTACATGCTCCTGACCTTCCAGCACTCCCACGAAGC...ATGATGTTCAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGAAATGGCAGGCCGCTaGCTGTGTTCTAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTEMAGR*LCSRKP
Trigger: TGGCTTCCTAGAACACAGCCAGCGGCCTGCCATTTC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CCA 90 bp TGGGTATTTTTCTTGGCTGTGAATAAGAACAAATGCTCTCTACCTCAGCGTCTGAGTTCTCTGGGGAAATaGCAGGCCGCTGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: WVFFLAVNKNKCSLPQRLSSLGK*QAAGCV
Trigger: AACACAGCCAGCGGCCTGCCATTTCCCCAGAGAACT...CAGACGCTGAGGTAGAGAGCATTTGTTCTTATTCACAGCCAAGAAAAATACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTAGTTCTCTGGGGAAATaGCAGGCCGCTGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTSSLGK*QAAGCV
Trigger: AACACAGCCAGCGGCCTGCCATTTCCCCAGAGAACT...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CCA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATCCCAGTGCGGAGATGTaGGGAGTGCAGAGATGTAGG +
Preference number: 4 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNPSAEM*GVQRCR
Trigger: CCTACATCTCTGCACTCCCCACATCTCCGCACTGGG...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTAGGATTGCAGCCCCCTaGAGAGCCTTCATCCTCATC +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTRIAAP*RAFILI
Trigger: GATGAGGATGAAGGCTCTCCAGGGGGCTGCAATCCT...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR TCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTACCCTTCATCAGGCTaGGGACTAAGGTGCCATGAG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTYPSSG*GLRCHE
Trigger: CTCATGGCACCTTAGTCCTCAGCCTGATGAAGGGTA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR TCA 90 bp TTGTGCAAGGCTTGGATCCTGCTGTGCTTTATACCGTACAGCAGTCGGAAGGAATCTTACTTCCATATCTaGGAGAATCTCTGTGTACCC +
Preference number: 4 (lower is better)
Translates to: LCKAWILLCFIPYSSRKESYFHI*ENLCVP
Trigger: GGGTACACAGAGATTCTCTCAGATATGGAAGTAAGA...TTCCTTCCGACTGCTGTACGGTATAAAGCACAGCAGGATCCAAGCCTTGCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR TCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCATCTTGAGGGTCTGTaGCATTGGGCCCAAACTCCA +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTHLEGL*HWAQTP
Trigger: TGGAGTTTGGGCCCAATGTCACAGACCCTCAAGATG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGTAGTAGCGGTTTTCTaGTGTCAGCTTCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTVVAVF*CQLLGG
Trigger: TCCCCCGAGAAGCTGACAGCAGAAAACCGCTACTAC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CCA 90 bp AGGCTTCCTAAGAGCCCACACTTCACAAGGAACATGAACACCTTTGCAGTAAAAGACTGCTTGAGTTTCTaGCAGATCCTTGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: RLPKSPHFTRNMNTFAVKDCLSF*QILVPV
Trigger: AACGGGCACAAGGATCTGCCAGAAACTCAAGCAGTC...TTTTACTGCAAAGGTGTTCATGTTCCTTGTGAAGTGTGGGCTCTTAGGAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTTGAACAGGTACCACTaGTTCTCGGGCTCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTLNRYH*FSGSGL
Trigger: TAGGCCAGAGCCCGAGAACCAGTGGTACCTGTTCAA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGGGAAGGGGTCAGGTTaGCAGCAGGTTCACATTAGA +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTGKGSG*QQVHIR
Trigger: TCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR TCA 90 bp CTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGCCTTCTCAATTTTGGTaGGCGAAACCTCGATCAAGA +
Preference number: 4 (lower is better)
Translates to: LGCFKLTRTLGCKVLMGLPSQFW*AKPRSR
Trigger: TCTTGATCGAGGTTTCGCTCACCAAAATTGAGAAGG...CAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR TCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCCTGAAGGATGCTGTTaGCATAGCATGTGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTPEGCC*HSMCCP
Trigger: TGGGCAACACATGCTATGTCAACAGCATCCTTCAGG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR TCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTACACCCGAGTGTCATTaGACAGGTACCACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTTPECH*TGTTGS
Trigger: AGAACCAGTGGTACCTGTTCAATGACACTCGGGTGT...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCCCAGACGGAAGAGATaGTGCTTCCACTGCAAAATC +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTPRRKR*CFHCKI
Trigger: GATTTTGCAGTGGAAGCAGCATCTCTTCCGTCTGGG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530267.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTCTGGCAGATCCTTGTaGCCGTTTTCTCCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTSGRSL*PFSPLR
Trigger: ACGAAGAGGAGAAAACGGGCACAAGGATCTGCCAGA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGACTGCTTGAGTTTCTaGCAGATCCTTGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTDCLSF*QILVPV
Trigger: AACGGGCACAAGGATCTGCCAGAAACTCAAGCAGTC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CCA 90 bp GTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTGTTGTCTTTGGAAATaGCTTCCATCAAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VCAHLGCFKLTRTLGCKVCCLWK*LPSSPC
Trigger: ACAAGGACTTGATGGAAGCCATTTCCAAAGACAACA...AACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp TGTCTGTCTTGTCTTCGGTTAGAAGTTAGAAGGGGGCTACAGCAGTGTCAGGGCAAAGGATGTTGTCTTTaGAAATGGCTTCCATCAAGT +
Preference number: 4 (lower is better)
Translates to: CLSCLRLEVRRGLQQCQGKGCCL*KWLPSS
Trigger: ACTTGATGGAAGCCATTTCCAAAGACAACATCCTTT...GCCCTGACACTGCTGTAGCCCCCTTCTAACTTCTAACCGAAGACAAGACAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CCA 90 bp CACAAGGAACATGAACACCTTTGCAGTAAAATCAGGACTCTAACCACAAGGGGGCCTTTGTGCAAGGCTTaGATCCTGCTGTGCTTTATA +
Preference number: 4 (lower is better)
Translates to: HKEHEHLCSKIRTLTTRGPLCKA*ILLCFI
Trigger: TATAAAGCACAGCAGGATCCAAGCCTTGCACAAAGG...CCCCCTTGTGGTTAGAGTCCTGATTTTACTGCAAAGGTGTTCATGTTCCTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR TCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTCAAAACATTGGAGCTaGGGTCTAGCCTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTSKHWS*GLACFL
Trigger: CAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR GCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTAGACGGAAGAGATGCTaGTTCCACTGCAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTRRKRC*FHCKIQ
Trigger: CTGGATTTTGCAGTGGAAGCAGCATCTCTTCCGTCT...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530267.5
CDS-3UTR GCA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATTCTGGCAGATCCTTGTaGCCGTTTTCTCCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNSGRSL*PFSPLR
Trigger: ACGAAGAGGAGAAAACGGGCACAAGGATCTGCCAGA...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp TTGTGCAAGGCTTGGATCCTGCTGTGCTTTATACCGTACAGCAGTCGGAAGGAAAAAGGATGTTGTCTTTaGAAATGGCTTCCATCAAGT +
Preference number: 4 (lower is better)
Translates to: LCKAWILLCFIPYSSRKEKGCCL*KWLPSS
Trigger: ACTTGATGGAAGCCATTTCCAAAGACAACATCCTTT...TTCCTTCCGACTGCTGTACGGTATAAAGCACAGCAGGATCCAAGCCTTGCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTGTTGTCTTTGGAAATaGCTTCCATCAAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTCCLWK*LPSSPC
Trigger: ACAAGGACTTGATGGAAGCCATTTCCAAAGACAACA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CCA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTAAAGGATGTTGTCTTTaGAAATGGCTTCCATCAAGT +
Preference number: 4 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTKGCCL*KWLPSS
Trigger: ACTTGATGGAAGCCATTTCCAAAGACAACATCCTTT...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS GCA 90 bp GTGCCACCTGCGCGCAGGCCGCGGGGCCCGGGCGCTCGCACACGGTaGGCAGCACCTCGCGCCGCAGCAGCGCGAACACCTCGTCGGCCG +
Preference number: 5 (lower is better)
Translates to: VPPARRPRGPGARTR*AAPRAAAARTPRRP
Trigger: CGGCCGACGAGGTGTTCGCGCTGCTGCGGCGCGAGGTGCTGCGCACCGTGTGCGAGCGCCCGGGCCCCGCGGCCTGCGCGCAGGTGGCAC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS GCA 90 bp GTGGGGTCCGTCGGGCACACAGCGCGGGTGGCGAGCCAGCAGCCGTaGCACCTGCGCGCAGGCCGCGGGGCCCGGGCGCTCGCACACGGT +
Preference number: 5 (lower is better)
Translates to: VGSVGHTARVASQQP*HLRAGRGARALAHG
Trigger: ACCGTGTGCGAGCGCCCGGGCCCCGCGGCCTGCGCGCAGGTGGCACGGCTGCTGGCTCGCCACCCGCGCTGTGTGCCCGACGGACCCCAC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS CCA 90 bp TGGCAGAAGAGCAGGCGGTGGGGTCCGTCGGGCACACAGCGCGGGTaGCGAGCCAGCAGCCGTGCCACCTGCGCGCAGGCCGCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: WQKSRRWGPSGTQRG*RASSRATCAQAAGP
Trigger: GGGCCCCGCGGCCTGCGCGCAGGTGGCACGGCTGCTGGCTCGCCACCCGCGCTGTGTGCCCGACGGACCCCACCGCCTGCTCTTCTGCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS TCA 90 bp GGGGGCCGGCGCCACCCTGCAGCAGGCGCAGCACGCGACGCGCGCTaGAGAACTCGGCGAAGACGTCGGGGTGGTGGCGGCCGGCCACGT +
Preference number: 5 (lower is better)
Translates to: GGRRHPAAGAARDAR*RTRRRRRGGGGRPR
Trigger: ACGTGGCCGGCCGCCACCACCCCGACGTCTTCGCCGAGTTCTTCAGCGCGCGTCGCGTGCTGCGCCTGCTGCAGGGTGGCGCCGGCCCCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS CCA 90 bp AGCACGCGACGCGCGCTGAAGAACTCGGCGAAGACGTCGGGGTGGTaGCGGCCGGCCACGTGCAGCAGCTGGCAGCCCACGCGGCGCGGC +
Preference number: 5 (lower is better)
Translates to: STRRALKNSAKTSGW*RPATCSSWQPTRRG
Trigger: GCCGCGCCGCGTGGGCTGCCAGCTGCTGCACGTGGCCGGCCGCCACCACCCCGACGTCTTCGCCGAGTTCTTCAGCGCGCGTCGCGTGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS CCA 90 bp CGCAGCACGCGACGCGCGCTGAAGAACTCGGCGAAGACGTCGGGGTaGTGGCGGCCGGCCACGTGCAGCAGCTGGCAGCCCACGCGGCGC +
Preference number: 5 (lower is better)
Translates to: RSTRRALKNSAKTSG*WRPATCSSWQPTRR
Trigger: GCGCCGCGTGGGCTGCCAGCTGCTGCACGTGGCCGGCCGCCACCACCCCGACGTCTTCGCCGAGTTCTTCAGCGCGCGTCGCGTGCTGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS CCA 90 bp CCTTCGGCTGGGCAGCGGAAGCGGCCGAGGCAACGCACCAGCTGCTaGCAGAAGAGCAGGCGGTGGGGTCCGTCGGGCACACAGCGCGGG +
Preference number: 5 (lower is better)
Translates to: PSAGQRKRPRQRTSC*QKSRRWGPSGTQRG
Trigger: CCCGCGCTGTGTGCCCGACGGACCCCACCGCCTGCTCTTCTGCCAGCAGCTGGTGCGTTGCCTCGGCCGCTTCCGCTGCCCAGCCGAAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS GCA 90 bp TCGCCTTCGGCTGGGCAGCGGAAGCGGCCGAGGCAACGCACCAGCTaGTGGCAGAAGAGCAGGCGGTGGGGTCCGTCGGGCACACAGCGC +
Preference number: 5 (lower is better)
Translates to: SPSAGQRKRPRQRTS*WQKSRRWGPSGTQR
Trigger: GCGCTGTGTGCCCGACGGACCCCACCGCCTGCTCTTCTGCCAGCAGCTGGTGCGTTGCCTCGGCCGCTTCCGCTGCCCAGCCGAAGGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS CCA 90 bp AAGCGGCCGAGGCAACGCACCAGCTGCTGGCAGAAGAGCAGGCGGTaGGGTCCGTCGGGCACACAGCGCGGGTGGCGAGCCAGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: KRPRQRTSCWQKSRR*GPSGTQRGWRASSR
Trigger: ACGGCTGCTGGCTCGCCACCCGCGCTGTGTGCCCGACGGACCCCACCGCCTGCTCTTCTGCCAGCAGCTGGTGCGTTGCCTCGGCCGCTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS GCA 90 bp TCCAGCGGCTGCCGCGCCGCCTCCAGCACGCGCCGAACCAGCCCCTaGTTCACGCTGACCGGGTATGACGACGTCACCACCGCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: SSGCRAASSTRRTSP*FTLTGYDDVTTASK
Trigger: CTTGGAGGCGGTGGTGACGTCGTCATACCCGGTCAGCGTGAAGCAGGGGCTGGTTCGGCGCGTGCTGGAGGCGGCGCGGCAGCCGCTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS TCA 90 bp GCCGCGCCGCCTCCAGCACGCGCCGAACCAGCCCCTGCTTCACGCTaGCCGGGTATGACGACGTCACCACCGCCTCCAAGATCTTGTCCA +
Preference number: 5 (lower is better)
Translates to: AAPPPARAEPAPASR*PGMTTSPPPPRSCP
Trigger: TGGACAAGATCTTGGAGGCGGTGGTGACGTCGTCATACCCGGTCAGCGTGAAGCAGGGGCTGGTTCGGCGCGTGCTGGAGGCGGCGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CAA 90 bp GCCCTCAGAGCCACATGTCCGCTCCCCGGAGGGGATGGCAGCATCCGGGTGGGTTTGCCACCTGCAGGATaGCAGCCCCCTGGAGAGCCT +
Preference number: 5 (lower is better)
Translates to: ALRATCPLPGGDGSIRVGLPPAG*QPPGEP
Trigger: AGGCTCTCCAGGGGGCTGCAATCCTGCAGGTGGCAA...ACCCACCCGGATGCTGCCATCCCCTCCGGGGAGCGGACATGTGGCTCTGAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS TCA 90 bp CTCCAGCACGCGCCGAACCAGCCCCTGCTTCACGCTGACCGGGTATaGCGACGTCACCACCGCCTCCAAGATCTTGTCCATGGCGCCCGC +
Preference number: 5 (lower is better)
Translates to: LQHAPNQPLLHADRV*RRHHRLQDLVHGAR
Trigger: GCGGGCGCCATGGACAAGATCTTGGAGGCGGTGGTGACGTCGTCATACCCGGTCAGCGTGAAGCAGGGGCTGGTTCGGCGCGTGCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CAA 90 bp CGTCCAGGATGCGGAGAGGAAGTTCTCTGGGGAAATGGCAGGCCGCTGGCTGTGGCCCCTGTGCACTGGTaGGTGGGGGCAACTCCCGGG +
Preference number: 5 (lower is better)
Translates to: RPGCGEEVLWGNGRPLAVAPVHW*VGATPG
Trigger: CCCGGGAGTTGCCCCCACCAACCAGTGCACAGGGGC...CACAGCCAGCGGCCTGCCATTTCCCCAGAGAACTTCCTCTCCGCATCCTGGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CAA 90 bp AAGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTGCCCCTGTGCACTGGTaGGTGGGGGCAACTCCCGGG +
Preference number: 5 (lower is better)
Translates to: KGATAVSGHFTQPAGGCCAPVHW*VGATPG
Trigger: CCCGGGAGTTGCCCCCACCAACCAGTGCACAGGGGC...ACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS CCA 90 bp GGGGGCTCCTCGGGCGGAGAGGGCGAGCTGGACTGCTTGAGTTTCTaGCAGATCCTTGTGCCCGTTTTCTCCTCTTCGTGCAGCCTCCCG +
Preference number: 5 (lower is better)
Translates to: GGSSGGEGELDCLSF*QILVPVFSSSCSLP
Trigger: CGGGAGGCTGCACGAAGAGGAGAAAACGGGCACAAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGCCCTCTCCGCCCGAGGAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530535.5
CDS GCA 90 bp AAGGGCACTGCCCCTGGGCCAGAAGCTTTGGCTCCAGCAAGTCCTTaGTGTGTGACCCAGAGCAAGCCACTTCCCCGCTCTGGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: KGTAPGPEALAPASP*CVTQSKPLPRSGPQ
Trigger: CTGAGGCCCAGAGCGGGGAAGTGGCTTGCTCTGGGTCACACAGCAAGGACTTGCTGGAGCCAAAGCTTCTGGCCCAGGGGCAGTGCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS GCA 90 bp GCCAGCTCGCTCTTCTGCGAAGTCCAGGCATCCTGCCCCAGCAGCTaGTTGATGCGGTCCTCATTGGGAACATGGAGGTCCTCCCGGACC +
Preference number: 5 (lower is better)
Translates to: ASSLFCEVQASCPSS*LMRSSLGTWRSSRT
Trigger: GGTCCGGGAGGACCTCCATGTTCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGCAGGATGCCTGGACTTCGCAGAAGAGCGAGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530267.5
CDS CCA 90 bp CTGAGGTTCCGGACAACACCATCCATGAGCTCCAATGGGAGGTGCTaGACCACGCTGGCCAGGGCGCTAGATGGTGGCTCCTCCTCTGCG +
Preference number: 5 (lower is better)
Translates to: LRFRTTPSMSSNGRC*TTLARALDGGSSSA
Trigger: CGCAGAGGAGGAGCCACCATCTAGCGCCCTGGCCAGCGTGGTCCAGCACCTCCCATTGGAGCTCATGGATGGTGTTGTCCGGAACCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS CCA 90 bp CTGAGGTTCCGGACAACACCATCCATGAGCTCCAATGGGAGGTGCTaGACCACGCTGGCCAGGGCGCTAGATGGTGGCTCCTCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: LRFRTTPSMSSNGRC*TTLARALDGGSSSP
Trigger: GGGAGAGGAGGAGCCACCATCTAGCGCCCTGGCCAGCGTGGTCCAGCACCTCCCATTGGAGCTCATGGATGGTGTTGTCCGGAACCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528910.5
CDS-3UTR CAA 90 bp CACCCGAGTGTCATTGAACAGGTACCACTGGTTCTCGGGCTCTGGCCTATCGGCCCACAGAGGTTGAACTaGGGGCCGGGGGCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: HPSVIEQVPLVLGLWPIGPQRLN*GPGAPR
Trigger: CCGAGGAGCCCCCGGCCCCAAGTTCAACCTCTGTGG...GCCGATAGGCCAGAGCCCGAGAACCAGTGGTACCTGTTCAATGACACTCGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CAA 90 bp GCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAAAGGTGCCCCTGTGCACTGGTaGGTGGGGGCAACTCCCGGG +
Preference number: 5 (lower is better)
Translates to: AVALGKGAGLGLCSSQKGAPVHW*VGATPG
Trigger: CCCGGGAGTTGCCCCCACCAACCAGTGCACAGGGGC...ACCTTTCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp CCAGAGAAGCGGCAGGGCGGGCAGCGCCCTCACGGGCATAGCAGTAGTAGTGACGCTTCCATCAAGTCCTaGTGCAGGGTGGGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: PEKRQGGQRPHGHSSSSDASIKS*CRVGSV
Trigger: GACAGAGCCCACCCTGCACAAGGACTTGATGGAAGC...GTCACTACTACTGCTATGCCCGTGAGGGCGCTGCCCGCCCTGCCGCTTCTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CAA 90 bp CGTCCAGGATGCGGAGAGGAAGTTCTCTGGGGAAATGGCAGGCCGCTGGCTGTGACCATGCAGTGGCGCTaGGTAAGGGGGCAGGTCTCG +
Preference number: 5 (lower is better)
Translates to: RPGCGEEVLWGNGRPLAVTMQWR*VRGQVS
Trigger: CGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT...CACAGCCAGCGGCCTGCCATTTCCCCAGAGAACTTCCTCTCCGCATCCTGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS GCA 90 bp TCGCCCCTCCACACTGGGCTGCAATGCCAGAACAAGGCTTTCAGCTaGTTCTGCCTGGAAGGGCACTGCCCCTGGGCCAGAAGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: SPLHTGLQCQNKAFS*FCLEGHCPWARSFG
Trigger: GCCAAAGCTTCTGGCCCAGGGGCAGTGCCCTTCCAGGCAGAAGCAGCTGAAAGCCTTGTTCTGGCATTGCAGCCCAGTGTGGAGGGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR CAA 90 bp CAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGCCACAGAGGTTGAACTaGGGGCCGGGGGCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: QCQGTSPNLQVAAVAATKPQRLN*GPGAPR
Trigger: CCGAGGAGCCCCCGGCCCCAAGTTCAACCTCTGTGG...CTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp TCTGCCCACCAGCTTCCTTGGAGTCCAGGCCTTCGATGTACAGGCTGGTGGGGGTGCCCACCAGCTTCCTaGGAGTCCAGGCCTTCGATG +
Preference number: 5 (lower is better)
Translates to: SAHQLPWSPGLRCTGWWGCPPAS*ESRPSM
Trigger: CATCGAAGGCCTGGACTCCAAGGAAGCTGGTGGGCA...CCCCCACCAGCCTGTACATCGAAGGCCTGGACTCCAAGGAAGCTGGTGGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS GCA 90 bp TTGCTGAGGTTCCGGACAACACCATCCATGAGCTCCAATGGGAGGTaGTGGACCACGCTGGCCAGGGCGCTAGATGGTGGCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LLRFRTTPSMSSNGR*WTTLARALDGGSSS
Trigger: AGAGGAGGAGCCACCATCTAGCGCCCTGGCCAGCGTGGTCCAGCACCTCCCATTGGAGCTCATGGATGGTGTTGTCCGGAACCTCAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528910.5
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp AGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTTGCCCCAGCAGCTGCTaGATGCGGTCCTCATTGGGA +
Preference number: 5 (lower is better)
Translates to: RGLQQCQGTSPNLQVAAVCPSSC*MRSSLG
Trigger: TCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGCA...AACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp GGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGTGCCCACCAGCTTCCTaGGAGTCCAGGCCTTCGATG +
Preference number: 5 (lower is better)
Translates to: GYSSVRALHPTCRWLLLQCPPAS*ESRPSM
Trigger: CATCGAAGGCCTGGACTCCAAGGAAGCTGGTGGGCA...CTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp CACCCGAGTGTCATTGAACAGGTACCACTGGTTCTCGGGCTCTGGCCTATCGGCGAGGTAGCACGGCCCTaGGCTCAGCTCCACCACCTT +
Preference number: 5 (lower is better)
Translates to: HPSVIEQVPLVLGLWPIGEVARP*AQLHHL
Trigger: AAGGTGGTGGAGCTGAGCCAAGGGCCGTGCTACCTC...GCCGATAGGCCAGAGCCCGAGAACCAGTGGTACCTGTTCAATGACACTCGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CAA 90 bp CTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTTTGCCACCTGCAGGATaGCAGCCCCCTGGAGAGCCT +
Preference number: 5 (lower is better)
Translates to: LQQCQGTSPNLQVAAVAALPPAG*QPPGEP
Trigger: AGGCTCTCCAGGGGGCTGCAATCCTGCAGGTGGCAA...AGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS TCA 90 bp GGTGGAAGGCTTCGTGGGAGTGCTGGAAGGTCAGGAGCATGTACTTaGGCACAGACAAGGCAGCTCCCCGGACGATGGGGTACAGCAGCT +
Preference number: 5 (lower is better)
Translates to: GGRLRGSAGRSGACT*AQTRQLPGRWGTAA
Trigger: AGCTGCTGTACCCCATCGTCCGGGGAGCTGCCTTGTCTGTGCTCAAGTACATGCTCCTGACCTTCCAGCACTCCCACGAAGCCTTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000528910.5
ENST00000529308.6
ENST00000530546.5
CDS GCA 90 bp GGACGCCCTCAGCCAGGTCCCAGACGGAAGAGATGCTGCTTCCACTaGAAAATCCAGTCTTCCCACCCCGCCTGGCACAAGCCTCTATGT +
Preference number: 5 (lower is better)
Translates to: GRPQPGPRRKRCCFH*KIQSSHPAWHKPLC
Trigger: ACATAGAGGCTTGTGCCAGGCGGGGTGGGAAGACTGGATTTTGCAGTGGAAGCAGCATCTCTTCCGTCTGGGACCTGGCTGAGGGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528910.5
ENST00000529308.6
ENST00000530267.5
ENST00000530535.5
CDS CCA 90 bp GTCATCATTGCTGAGGTTCCGGACAACACCATCCATGAGCTCCAATaGGAGGTGCTGGACCACGCTGGCCAGGGCGCTAGATGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: VIIAEVPDNTIHELQ*EVLDHAGQGARWWL
Trigger: GAGCCACCATCTAGCGCCCTGGCCAGCGTGGTCCAGCACCTCCCATTGGAGCTCATGGATGGTGTTGTCCGGAACCTCAGCAATGATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528910.5
ENST00000529308.6
ENST00000530546.5
CDS CCA 90 bp GTTCCCACATTGACTCACACCTGCAAAGGGCAGCCCCGGGGTCTGTaGGCTGAACCAGACATGGCTGGGAAATGCACAAGCCCAGCACAG +
Preference number: 5 (lower is better)
Translates to: VPTLTHTCKGQPRGL*AEPDMAGKCTSPAQ
Trigger: CTGTGCTGGGCTTGTGCATTTCCCAGCCATGTCTGGTTCAGCCCACAGACCCCGGGGCTGCCCTTTGCAGGTGTGAGTCAATGTGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR CAA 90 bp CACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGCCAACTGCTCAGAGGTGCCCCAGCAGCTGCTaGATGCGGTCCTCATTGGGA +
Preference number: 5 (lower is better)
Translates to: HPTCRWLLLQLQRPTAQRCPSSC*MRSSLG
Trigger: TCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGCA...CCTCTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp GAGCTGCCTCCCAGGTGCATCCTCTCCACGGGCAGCATCACCCAGCCCTCAGTACATGTGTTGCCCAGGTaGATGAGACCAATCTTGCCC +
Preference number: 5 (lower is better)
Translates to: ELPPRCILSTGSITQPSVHVLPR*MRPILP
Trigger: GGGCAAGATTGGTCTCATCAACCTGGGCAACACATG...TACTGAGGGCTGGGTGATGCTGCCCGTGGAGAGGATGCACCTGGGAGGCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CAA 90 bp CAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGAGGTAGCACGGCCCTaGGCTCAGCTCCACCACCTT +
Preference number: 5 (lower is better)
Translates to: QCQGTSPNLQVAAVAATKEVARP*AQLHHL
Trigger: AAGGTGGTGGAGCTGAGCCAAGGGCCGTGCTACCTC...CTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp GAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTACGTCATCCAGGATCTaGCGGCGCCGCATGGTGCGC +
Preference number: 5 (lower is better)
Translates to: EAKTRVCPSRLLQVNQDTTSSRI*RRRMVR
Trigger: GCGCACCATGCGGCGCCGCAAGATCCTGGATGACGT...AGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp AGGGAAGGCGAGAGAGAGGTCCGTGAAGGCCTCCTCCCGGGAGGAGACGTTGAGGACACCCGAGTGTCATaGAACAGGTACCACTGGTTC +
Preference number: 5 (lower is better)
Translates to: REGEREVREGLLPGGDVEDTRVS*NRYHWF
Trigger: GAACCAGTGGTACCTGTTCAATGACACTCGGGTGTC...CTCAACGTCTCCTCCCGGGAGGAGGCCTTCACGGACCTCTCTCTCGCCTTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CAA 90 bp GGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGGCTTCCATCAAGTCCTaGTGCAGGGTGGGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: GYSSVRALHPTCRWLLLQASIKS*CRVGSV
Trigger: GACAGAGCCCACCCTGCACAAGGACTTGATGGAAGC...CTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp AAGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTGTACCATCCTTCCTCTaGGTAGGGCCTGCCTCCACA +
Preference number: 5 (lower is better)
Translates to: KGATAVSGHFTQPAGGCCVPSFL*VGPAST
Trigger: TGTGGAGGCAGGCCCTACCAAGAGGAAGGATGGTAC...ACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp GGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACAACCATGCAGTGGCGCTaGGTAAGGGGGCAGGTCTCG +
Preference number: 5 (lower is better)
Translates to: GRQRPVCAHLGCFKLTRTTMQWR*VRGQVS
Trigger: CGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT...TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp CAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGACCATGCAGTGGCGCTaGGTAAGGGGGCAGGTCTCG +
Preference number: 5 (lower is better)
Translates to: QCQGTSPNLQVAAVAATKTMQWR*VRGQVS
Trigger: CGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT...CTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp ATGCGGAGAGGAAGTTCTCTGGGGAAATGGCAGGCCGCTGGCTGTGTTCTAGGATGCCCCAGCAGCTGCTaGATGCGGTCCTCATTGGGA +
Preference number: 5 (lower is better)
Translates to: MRRGSSLGKWQAAGCVLGCPSSC*MRSSLG
Trigger: TCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGCA...TCCTAGAACACAGCCAGCGGCCTGCCATTTCCCCAGAGAACTTCCTCTCCGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CAA 90 bp GAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTCCCGGGAGGAGACGTaGAGGCAGCAGAGACAGCAG +
Preference number: 5 (lower is better)
Translates to: EAKTRVCPSRLLQVNQDTSREET*RQQRQQ
Trigger: CTGCTGTCTCTGCTGCCTCAACGTCTCCTCCCGGGA...AGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp GGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACATGCCCACCAGCTTCCTaGGAGTCCAGGCCTTCGATG +
Preference number: 5 (lower is better)
Translates to: GRQRPVCAHLGCFKLTRTCPPAS*ESRPSM
Trigger: CATCGAAGGCCTGGACTCCAAGGAAGCTGGTGGGCA...TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp CACCCGAGTGTCATTGAACAGGTACCACTGGTTCTCGGGCTCTGGCCTATCGGCGTACCATCCTTCCTCTaGGTAGGGCCTGCCTCCACA +
Preference number: 5 (lower is better)
Translates to: HPSVIEQVPLVLGLWPIGVPSFL*VGPAST
Trigger: TGTGGAGGCAGGCCCTACCAAGAGGAAGGATGGTAC...GCCGATAGGCCAGAGCCCGAGAACCAGTGGTACCTGTTCAATGACACTCGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CAA 90 bp CAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGAGTTCGAGTCCTCCTaGACCAGAGAGGCCACCATG +
Preference number: 5 (lower is better)
Translates to: QCQGTSPNLQVAAVAATKEFESS*TREATM
Trigger: CATGGTGGCCTCTCTGGTCAAGGAGGACTCGAACTC...CTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp CAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGGAACATGGAGGTCCTaGATGGCCTCCATGACAGGC +
Preference number: 5 (lower is better)
Translates to: QCQGTSPNLQVAAVAATKGTWRS*MASMTG
Trigger: GCCTGTCATGGAGGCCATCAAGGACCTCCATGTTCC...CTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp GGGAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACAAAGAGCCACTGCAGCTaGGTCATCAGGGGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: GRQRPVCAHLGCFKLTRTKSHCS*VIRGCE
Trigger: CTCACAGCCCCTGATGACCAAGCTGCAGTGGCTCTT...TGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp AGGTCTAGCCTGTTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTTCCCGGGAGGAGACGTaGAGGCAGCAGAGACAGCAG +
Preference number: 5 (lower is better)
Translates to: RSSLFPEHHQIFPHGEPASREET*RQQRQQ
Trigger: CTGCTGTCTCTGCTGCCTCAACGTCTCCTCCCGGGA...AGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAACAGGCTAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp GCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAAAGGTGCTTCCATCAAGTCCTaGTGCAGGGTGGGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: AVALGKGAGLGLCSSQKGASIKS*CRVGSV
Trigger: GACAGAGCCCACCCTGCACAAGGACTTGATGGAAGC...ACCTTTCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp GAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTAAGAGCCACTGCAGCTaGGTCATCAGGGGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: EAKTRVCPSRLLQVNQDTKSHCS*VIRGCE
Trigger: CTCACAGCCCCTGATGACCAAGCTGCAGTGGCTCTT...AGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp GCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAAAGGTGGCGAGCTGGACTGCTaGAGTTTCTGGCAGATCCTT +
Preference number: 5 (lower is better)
Translates to: AVALGKGAGLGLCSSQKGGELDC*SFWQIL
Trigger: AAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGCC...ACCTTTCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp GTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTACGTCATCCAGGATCTaGCGGCGCCGCATGGTGCGC +
Preference number: 5 (lower is better)
Translates to: VCAHLGCFKLTRTLGCKVTSSRI*RRRMVR
Trigger: GCGCACCATGCGGCGCCGCAAGATCCTGGATGACGT...AACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp CTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTGACACCCGAGTGTCATaGAACAGGTACCACTGGTTC +
Preference number: 5 (lower is better)
Translates to: LQQCQGTSPNLQVAAVAADTRVS*NRYHWF
Trigger: GAACCAGTGGTACCTGTTCAATGACACTCGGGTGTC...AGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp CACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGCCAACTGCTCAGAGGGACACCCGAGTGTCATaGAACAGGTACCACTGGTTC +
Preference number: 5 (lower is better)
Translates to: HPTCRWLLLQLQRPTAQRDTRVS*NRYHWF
Trigger: GAACCAGTGGTACCTGTTCAATGACACTCGGGTGTC...CCTCTGAGCAGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp GCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAAAGGTTGCAGGTGGCTGCTGTaGCAGCTACAAAGGCCAACT +
Preference number: 5 (lower is better)
Translates to: AVALGKGAGLGLCSSQKGCRWLL*QLQRPT
Trigger: AGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCA...ACCTTTCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp AGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGGCTTCCTAAGAGCCCACACTCCTGGGTTCCCACATaGACTCACACCTGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: SYKGQLLRGAHRLPKSPHSWVPT*THTCKG
Trigger: CCCTTTGCAGGTGTGAGTCAATGTGGGAACCCAGGA...GTGTGGGCTCTTAGGAAGCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR CAA 90 bp CAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGGTCAGGAGCATGTACTaGAGCACAGACAAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: QCQGTSPNLQVAAVAATKVRSMY*STDKAA
Trigger: AGCTGCCTTGTCTGTGCTCAAGTACATGCTCCTGAC...CTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp AGGTCTAGCCTGTTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTGGAACATGGAGGTCCTaGATGGCCTCCATGACAGGC +
Preference number: 5 (lower is better)
Translates to: RSSLFPEHHQIFPHGEPAGTWRS*MASMTG
Trigger: GCCTGTCATGGAGGCCATCAAGGACCTCCATGTTCC...AGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAACAGGCTAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp ATGCGGAGAGGAAGTTCTCTGGGGAAATGGCAGGCCGCTGGCTGTGTTCTAGGATTGATGAGACCAATCTaGCCCGTGTCTGACTTGGCC +
Preference number: 5 (lower is better)
Translates to: MRRGSSLGKWQAAGCVLGLMRPI*PVSDLA
Trigger: GGCCAAGTCAGACACGGGCAAGATTGGTCTCATCAA...TCCTAGAACACAGCCAGCGGCCTGCCATTTCCCCAGAGAACTTCCTCTCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CAA 90 bp GCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAAAGGTCATGTGTTGCCCAGGTaGATGAGACCAATCTTGCCC +
Preference number: 5 (lower is better)
Translates to: AVALGKGAGLGLCSSQKGHVLPR*MRPILP
Trigger: GGGCAAGATTGGTCTCATCAACCTGGGCAACACATG...ACCTTTCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp CCATCACAGCCCCTGAGTCCAAGGAAGAACAATCTCTTGCTTAGGCTTACTTTTCCACAGAGGTTGAACTaGGGGCCGGGGGCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: PSQPLSPRKNNLLLRLTFPQRLN*GPGAPR
Trigger: CCGAGGAGCCCCCGGCCCCAAGTTCAACCTCTGTGG...AAAAGTAAGCCTAAGCAAGAGATTGTTCTTCCTTGGACTCAGGGGCTGTGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CAA 90 bp AGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTCTTGATGTCAAAACATaGGAGCTGAGGTCTAGCCTG +
Preference number: 5 (lower is better)
Translates to: RGLQQCQGTSPNLQVAAVLDVKT*ELRSSL
Trigger: CAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAG...AACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp GAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTTCAGTAGAGGGCTCTaGGCTCCCTGTGGCATCTCA +
Preference number: 5 (lower is better)
Translates to: EAKTRVCPSRLLQVNQDTFSRGL*APCGIS
Trigger: TGAGATGCCACAGGGAGCCAAGAGCCCTCTACTGAA...AGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CAA 90 bp CTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGACCGCCTCCAAGATCTaGTCCATGGCGCCCGCGCTC +
Preference number: 5 (lower is better)
Translates to: LGCFKLTRTLGCKVLMGLTASKI*SMAPAL
Trigger: GAGCGCGGGCGCCATGGACAAGATCTTGGAGGCGGT...CAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CAA 90 bp AAGGGGGCTACAGCAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTAGTGCAATGATCCACTaGTCAATATTCTTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: KGATAVSGHFTQPAGGCCSAMIH*SIFFPR
Trigger: CCTGGGGAAGAATATTGACAAGTGGATCATTGCACT...ACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTGCTGTAGCCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp TTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTAGGGAAGGAGGGTTGATGCGGTCCTCATaGGGAACATGGAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: FPEHHQIFPHGEPAREGGLMRSS*GTWRSL
Trigger: CAAGGACCTCCATGTTCCCAATGAGGACCGCATCAA...CCCTCCTTCCCTAGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp TACCTGGCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGATTGATGCGGTCCTCATaGGGAACATGGAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: YLAPGGKGSGWQQVHIRRLMRSS*GTWRSL
Trigger: CAAGGACCTCCATGTTCCCAATGAGGACCGCATCAA...TCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGCCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CAA 90 bp ACCATGCAGTGGCGCTTGGTAAGGGGGCAGGTCTCGGTCTCTGTTCTTCTCAGAGTTTCTGGCAGATCCTaGTGCCCGTTTTCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: TMQWRLVRGQVSVSVLLRVSGRS*CPFSPL
Trigger: AAGAGGAGAAAACGGGCACAAGGATCTGCCAGAAAC...TCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGCATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp GGGCGAGCTGGACTGCTTGAGTTTCTGGCAGATCCTTGTGCCCGTTTTCTCCTCGTTTCTGGCAGATCCTaGTGCCCGTTTTCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: GRAGLLEFLADPCARFLLVSGRS*CPFSPL
Trigger: AAGAGGAGAAAACGGGCACAAGGATCTGCCAGAAAC...GAGGAGAAAACGGGCACAAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGCCCCTGTGCACTGGTaGGTGGGGGCAACTCCCGGG +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTAPVHW*VGATPG
Trigger: CCCGGGAGTTGCCCCCACCAACCAGTGCACAGGGGC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CAA 90 bp CTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGACGTCATCCAGGATCTaGCGGCGCCGCATGGTGCGC +
Preference number: 5 (lower is better)
Translates to: LGCFKLTRTLGCKVLMGLTSSRI*RRRMVR
Trigger: GCGCACCATGCGGCGCCGCAAGATCCTGGATGACGT...CAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp TCACTTAGATGTGACATCTTGAGGGTCTGTGACATTGGGCCCAAACTCCACACCAAGAGCCACTGCAGCTaGGTCATCAGGGGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: SLRCDILRVCDIGPKLHTKSHCS*VIRGCE
Trigger: CTCACAGCCCCTGATGACCAAGCTGCAGTGGCTCTT...GGTGTGGAGTTTGGGCCCAATGTCACAGACCCTCAAGATGTCACATCTAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CAA 90 bp GACGTTGAGGCAGCAGAGACAGCAGATCCGAGTCACTATCTTGCCTCCAAACATGGCGAGCTGGACTGCTaGAGTTTCTGGCAGATCCTT +
Preference number: 5 (lower is better)
Translates to: DVEAAETADPSHYLASKHGELDC*SFWQIL
Trigger: AAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGCC...ATGTTTGGAGGCAAGATAGTGACTCGGATCTGCTGTCTCTGCTGCCTCAACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCCACAGAGGTTGAACTaGGGGCCGGGGGCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTPQRLN*GPGAPR
Trigger: CCGAGGAGCCCCCGGCCCCAAGTTCAACCTCTGTGG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CAA 90 bp CTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGTCCCGGGAGGAGACGTaGAGGCAGCAGAGACAGCAG +
Preference number: 5 (lower is better)
Translates to: LGCFKLTRTLGCKVLMGLSREET*RQQRQQ
Trigger: CTGCTGTCTCTGCTGCCTCAACGTCTCCTCCCGGGA...CAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp GTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTGTACCATCCTTCCTCTaGGTAGGGCCTGCCTCCACA +
Preference number: 5 (lower is better)
Translates to: VCAHLGCFKLTRTLGCKVVPSFL*VGPAST
Trigger: TGTGGAGGCAGGCCCTACCAAGAGGAAGGATGGTAC...AACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp TGTCTGTCTTGTCTTCGGTTAGAAGTTAGAAGGGGGCTACAGCAGTGTCAGGGCTTGATGAGACCAATCTaGCCCGTGTCTGACTTGGCC +
Preference number: 5 (lower is better)
Translates to: CLSCLRLEVRRGLQQCQGLMRPI*PVSDLA
Trigger: GGCCAAGTCAGACACGGGCAAGATTGGTCTCATCAA...GCCCTGACACTGCTGTAGCCCCCTTCTAACTTCTAACCGAAGACAAGACAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTACGTCATCCAGGATCTaGCGGCGCCGCATGGTGCGC +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTTSSRI*RRRMVR
Trigger: GCGCACCATGCGGCGCCGCAAGATCCTGGATGACGT...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CAA 90 bp TACCTGGCTCCTGGAGGGAAGGGGTCAGGTTGGCAGCAGGTTCACATTAGAAGAAAGAAGGAGGTGACGTaGCTGACAGATTCGAAGGAA +
Preference number: 5 (lower is better)
Translates to: YLAPGGKGSGWQQVHIRRKKEVT*LTDSKE
Trigger: TTCCTTCGAATCTGTCAGCAACGTCACCTCCTTCTT...TCTTCTAATGTGAACCTGCTGCCAACCTGACCCCTTCCCTCCAGGAGCCAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530546.5
CDS-3UTR CAA 90 bp CAGTGTCAGGGCACTTCACCCAACCTGCAGGTGGCTGCTGTTGCAGCTACAAAGAAAACCTTCTCAATTTaGGTGAGCGAAACCTCGATC +
Preference number: 5 (lower is better)
Translates to: QCQGTSPNLQVAAVAATKKTFSI*VSETSI
Trigger: GATCGAGGTTTCGCTCACCAAAATTGAGAAGGTTTT...CTTTGTAGCTGCAACAGCAGCCACCTGCAGGTTGGGTGAAGTGCCCTGACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp CTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGGAGTTCGAGTCCTCCTaGACCAGAGAGGCCACCATG +
Preference number: 5 (lower is better)
Translates to: LGCFKLTRTLGCKVLMGLEFESS*TREATM
Trigger: CATGGTGGCCTCTCTGGTCAAGGAGGACTCGAACTC...CAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp TTGTGCAAGGCTTGGATCCTGCTGTGCTTTATACCGTACAGCAGTCGGAAGGAATTGATGAGACCAATCTaGCCCGTGTCTGACTTGGCC +
Preference number: 5 (lower is better)
Translates to: LCKAWILLCFIPYSSRKELMRPI*PVSDLA
Trigger: GGCCAAGTCAGACACGGGCAAGATTGGTCTCATCAA...TTCCTTCCGACTGCTGTACGGTATAAAGCACAGCAGGATCCAAGCCTTGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp TTGTGCAAGGCTTGGATCCTGCTGTGCTTTATACCGTACAGCAGTCGGAAGGAACATGTGTTGCCCAGGTaGATGAGACCAATCTTGCCC +
Preference number: 5 (lower is better)
Translates to: LCKAWILLCFIPYSSRKEHVLPR*MRPILP
Trigger: GGGCAAGATTGGTCTCATCAACCTGGGCAACACATG...TTCCTTCCGACTGCTGTACGGTATAAAGCACAGCAGGATCCAAGCCTTGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTCCCGGGAGGAGACGTaGAGGCAGCAGAGACAGCAG +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTSREET*RQQRQQ
Trigger: CTGCTGTCTCTGCTGCCTCAACGTCTCCTCCCGGGA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGAGGTAGCACGGCCCTaGGCTCAGCTCCACCACCTT +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTEVARP*AQLHHL
Trigger: AAGGTGGTGGAGCTGAGCCAAGGGCCGTGCTACCTC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTTGCCACCTGCAGGATaGCAGCCCCCTGGAGAGCCT +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTLPPAG*QPPGEP
Trigger: AGGCTCTCCAGGGGGCTGCAATCCTGCAGGTGGCAA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CAA 90 bp AGGTCTAGCCTGTTTCCTGAACATCATCAGATCTTCCCGCATGGGGAGCCTGCTCTTAGATGTGACATCTaGAGGGTCTGTGACATTGGG +
Preference number: 5 (lower is better)
Translates to: RSSLFPEHHQIFPHGEPALRCDI*RVCDIG
Trigger: CCCAATGTCACAGACCCTCAAGATGTCACATCTAAG...AGCAGGCTCCCCATGCGGGAAGATCTGATGATGTTCAGGAAACAGGCTAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS-3UTR CAA 90 bp AGCTACAAAGGCCAACTGCTCAGAGGAGCCCACAGGCTTCCTAAGAGCCCACACAGGTCGTATTCACCATaGAGCAGGATATTCCATCAA +
Preference number: 5 (lower is better)
Translates to: SYKGQLLRGAHRLPKSPHRSYSP*SRIFHQ
Trigger: TTGATGGAATATCCTGCTCAATGGTGAATACGACCT...GTGTGGGCTCTTAGGAAGCCTGTGGGCTCCTCTGAGCAGTTGGCCTTTGTAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR CAA 90 bp CACAAGGAACATGAACACCTTTGCAGTAAAATCAGGACTCTAACCACAAGGGGGGGCTCCAGCAAGTCCTaGCTGTGTGACCCAGAGCAA +
Preference number: 5 (lower is better)
Translates to: HKEHEHLCSKIRTLTTRGGSSKS*LCDPEQ
Trigger: TTGCTCTGGGTCACACAGCAAGGACTTGCTGGAGCC...CCCCCTTGTGGTTAGAGTCCTGATTTTACTGCAAAGGTGTTCATGTTCCTTGTG
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR CAA 90 bp GAGGCAAAGACCCGTGTGTGCCCATCTCGGCTGCTTCAAGTTAACCAGGACACTAAAACCTTCTCAATTTaGGTGAGCGAAACCTCGATC +
Preference number: 5 (lower is better)
Translates to: EAKTRVCPSRLLQVNQDTKTFSI*VSETSI
Trigger: GATCGAGGTTTCGCTCACCAAAATTGAGAAGGTTTT...AGTGTCCTGGTTAACTTGAAGCAGCCGAGATGGGCACACACGGGTCTTTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTGCCCCAGCAGCTGCTaGATGCGGTCCTCATTGGGA +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTCPSSC*MRSSLG
Trigger: TCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGCA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTGCCCACCAGCTTCCTaGGAGTCCAGGCCTTCGATG +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTCPPAS*ESRPSM
Trigger: CATCGAAGGCCTGGACTCCAAGGAAGCTGGTGGGCA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CAA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAGGTAGCACGGCCCTaGGCTCAGCTCCACCACCTT +
Preference number: 5 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNEVARP*AQLHHL
Trigger: AAGGTGGTGGAGCTGAGCCAAGGGCCGTGCTACCTC...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATTTGCCACCTGCAGGATaGCAGCCCCCTGGAGAGCCT +
Preference number: 5 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNLPPAG*QPPGEP
Trigger: AGGCTCTCCAGGGGGCTGCAATCCTGCAGGTGGCAA...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp GTACTTGATGTCAAAACATTGGAGCTGAGGTCTAGCCTGTTTCCTGAACATCATGGAACATGGAGGTCCTaGATGGCCTCCATGACAGGC +
Preference number: 5 (lower is better)
Translates to: VLDVKTLELRSSLFPEHHGTWRS*MASMTG
Trigger: GCCTGTCATGGAGGCCATCAAGGACCTCCATGTTCC...ATGATGTTCAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTAAGAGCCACTGCAGCTaGGTCATCAGGGGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTKSHCS*VIRGCE
Trigger: CTCACAGCCCCTGATGACCAAGCTGCAGTGGCTCTT...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGCTTCCATCAAGTCCTaGTGCAGGGTGGGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTASIKS*CRVGSV
Trigger: GACAGAGCCCACCCTGCACAAGGACTTGATGGAAGC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CAA 90 bp TTGTGCAAGGCTTGGATCCTGCTGTGCTTTATACCGTACAGCAGTCGGAAGGAACTTGATGTCAAAACATaGGAGCTGAGGTCTAGCCTG +
Preference number: 5 (lower is better)
Translates to: LCKAWILLCFIPYSSRKELDVKT*ELRSSL
Trigger: CAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAG...TTCCTTCCGACTGCTGTACGGTATAAAGCACAGCAGGATCCAAGCCTTGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATCCTGGGCCAGAAGCTTaGGCTCCAGCAAGTCCTTGC +
Preference number: 5 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNPGPEA*APASPC
Trigger: GCAAGGACTTGCTGGAGCCAAAGCTTCTGGCCCAGG...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS-3UTR CAA 90 bp AGGCTTCCTAAGAGCCCACACTTCACAAGGAACATGAACACCTTTGCAGTAAAAGTCAGGAGCATGTACTaGAGCACAGACAAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: RLPKSPHFTRNMNTFAVKVRSMY*STDKAA
Trigger: AGCTGCCTTGTCTGTGCTCAAGTACATGCTCCTGAC...TTTTACTGCAAAGGTGTTCATGTTCCTTGTGAAGTGTGGGCTCTTAGGAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp TTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAGTTCGAGTCCTCCTaGACCAGAGAGGCCACCATG +
Preference number: 5 (lower is better)
Translates to: FKLTRTLGCKVLMGLIPNEFESS*TREATM
Trigger: CATGGTGGCCTCTCTGGTCAAGGAGGACTCGAACTC...ATTGGGGATCAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGGCGAGCTGGACTGCTaGAGTTTCTGGCAGATCCTT +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTGELDC*SFWQIL
Trigger: AAGGATCTGCCAGAAACTCAAGCAGTCCAGCTCGCC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTGCAGGTGGCTGCTGTaGCAGCTACAAAGGCCAACT +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTCRWLL*QLQRPT
Trigger: AGTTGGCCTTTGTAGCTGCAACAGCAGCCACCTGCA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTTGATGCGGTCCTCATaGGGAACATGGAGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTLMRSS*GTWRSS
Trigger: GGAGGACCTCCATGTTCCCAATGAGGACCGCATCAA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530267.5
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGTCAGGAGCATGTACTaGAGCACAGACAAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTVRSMY*STDKAA
Trigger: AGCTGCCTTGTCTGTGCTCAAGTACATGCTCCTGAC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTTGATGCGGTCCTCATaGGGAACATGGAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTLMRSS*GTWRSL
Trigger: CAAGGACCTCCATGTTCCCAATGAGGACCGCATCAA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTTTGATGAGACCAATCTaGCCCGTGTCTGACTTGGCC +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTLMRPI*PVSDLA
Trigger: GGCCAAGTCAGACACGGGCAAGATTGGTCTCATCAA...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTCATGTGTTGCCCAGGTaGATGAGACCAATCTTGCCC +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTHVLPR*MRPILP
Trigger: GGGCAAGATTGGTCTCATCAACCTGGGCAACACATG...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGACACCCGAGTGTCATaGAACAGGTACCACTGGTTC +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTDTRVS*NRYHWF
Trigger: GAACCAGTGGTACCTGTTCAATGACACTCGGGTGTC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CAA 90 bp CTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGCTTGATGTCAAAACATaGGAGCTGAGGTCTAGCCTG +
Preference number: 5 (lower is better)
Translates to: LGCFKLTRTLGCKVLMGLLDVKT*ELRSSL
Trigger: CAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAG...CAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp GTACTTGATGTCAAAACATTGGAGCTGAGGTCTAGCCTGTTTCCTGAACATCATGTCACACTGTCATCATaGCTGAGGTTCCGGACAACA +
Preference number: 5 (lower is better)
Translates to: VLDVKTLELRSSLFPEHHVTLSS*LRFRTT
Trigger: TGTTGTCCGGAACCTCAGCAATGATGACAGTGTGAC...ATGATGTTCAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGTCACACTGTCATCATaGCTGAGGTTCCGGACAACA +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTVTLSS*LRFRTT
Trigger: TGTTGTCCGGAACCTCAGCAATGATGACAGTGTGAC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp CTCGGCTGCTTCAAGTTAACCAGGACACTTGGGTGTAAAGTTTTAATGGGACTGAGTGCAATGATCCACTaGTCAATATTCTTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LGCFKLTRTLGCKVLMGLSAMIH*SIFFPR
Trigger: CCTGGGGAAGAATATTGACAAGTGGATCATTGCACT...CAGTCCCATTAAAACTTTACACCCAAGTGTCCTGGTTAACTTGAAGCAGCCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526425.1
ENST00000529308.6
CDS-3UTR CAA 90 bp GTACTTGATGTCAAAACATTGGAGCTGAGGTCTAGCCTGTTTCCTGAACATCATGTTTCTGGCAGATCCTaGTGCCCGTTTTCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: VLDVKTLELRSSLFPEHHVSGRS*CPFSPL
Trigger: AAGAGGAGAAAACGGGCACAAGGATCTGCCAGAAAC...ATGATGTTCAGGAAACAGGCTAGACCTCAGCTCCAATGTTTTGACATCAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530546.5
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTGTTTCTGGCAGATCCTaGTGCCCGTTTTCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTVSGRS*CPFSPL
Trigger: AAGAGGAGAAAACGGGCACAAGGATCTGCCAGAAAC...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS-3UTR CAA 90 bp GGGTGTAAAGTTTTAATGGGACTGATCCCCAATGAAAGGGACTTAGGTCTTACTAAGAAGGAGGTGACGTaGCTGACAGATTCGAAGGAA +
Preference number: 5 (lower is better)
Translates to: GCKVLMGLIPNERDLGLTKKEVT*LTDSKE
Trigger: TTCCTTCGAATCTGTCAGCAACGTCACCTCCTTCTT...AGTAAGACCTAAGTCCCTTTCATTGGGGATCAGTCCCATTAAAACTTTACACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000529308.6
ENST00000530267.5
ENST00000530546.5
CDS CCA 72 bp AGCAGGCGGTGGGGTCCGTCGGGCACACAGCGCGGGTaGCGAGCCAGCAGCCGTGCCACCTGCGCGCAGGCC +
Preference number: 6 (lower is better)
Translates to: SRRWGPSGTQRG*RASSRATCAQA
Trigger: GGCCTGCGCGCAGGTGGCACGGCTGCTGGCTCGCCACCCGCGCTGTGTGCCCGACGGACCCCACCGCCTGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS TCA 72 bp CGCCACCCTGCAGCAGGCGCAGCACGCGACGCGCGCTaGAGAACTCGGCGAAGACGTCGGGGTGGTGGCGGC +
Preference number: 6 (lower is better)
Translates to: RHPAAGAARDAR*RTRRRRRGGGG
Trigger: GCCGCCACCACCCCGACGTCTTCGCCGAGTTCTTCAGCGCGCGTCGCGTGCTGCGCCTGCTGCAGGGTGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS CCA 72 bp CGACGCGCGCTGAAGAACTCGGCGAAGACGTCGGGGTaGTGGCGGCCGGCCACGTGCAGCAGCTGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: RRALKNSAKTSG*WRPATCSSWQP
Trigger: GGGCTGCCAGCTGCTGCACGTGGCCGGCCGCCACCACCCCGACGTCTTCGCCGAGTTCTTCAGCGCGCGTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS CCA 72 bp AGGCAACGCACCAGCTGCTGGCAGAAGAGCAGGCGGTaGGGTCCGTCGGGCACACAGCGCGGGTGGCGAGCC +
Preference number: 6 (lower is better)
Translates to: RQRTSCWQKSRR*GPSGTQRGWRA
Trigger: GGCTCGCCACCCGCGCTGTGTGCCCGACGGACCCCACCGCCTGCTCTTCTGCCAGCAGCTGGTGCGTTGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS GCA 72 bp TGCCGCGCCGCCTCCAGCACGCGCCGAACCAGCCCCTaGTTCACGCTGACCGGGTATGACGACGTCACCACC +
Preference number: 6 (lower is better)
Translates to: CRAASSTRRTSP*FTLTGYDDVTT
Trigger: GGTGGTGACGTCGTCATACCCGGTCAGCGTGAAGCAGGGGCTGGTTCGGCGCGTGCTGGAGGCGGCGCGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS GCA 72 bp CACAGCTGCGCCAGGAGCCCGCTCACCTGCTGGGCCTaGTCTAGGAACTCCACGGCGCCCTCCTCGCCTTCG +
Preference number: 6 (lower is better)
Translates to: HSCARSPLTCWA*SRNSTAPSSPS
Trigger: CGAAGGCGAGGAGGGCGCCGTGGAGTTCCTAGAGCAGGCCCAGCAGGTGAGCGGGCTCCTGGCGCAGCTGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS CAA 72 bp ACCGGGTATGACGACGTCACCACCGCCTCCAAGATCTaGTCCATGGCGCCCGCGCTCCCGGACCCCGGTGGG +
Preference number: 6 (lower is better)
Translates to: TGYDDVTTASKI*SMAPALPDPGG
Trigger: CCCACCGGGGTCCGGGAGCGCGGGCGCCATGGACAAGATCTTGGAGGCGGTGGTGACGTCGTCATACCCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS CAA 90 bp GATGGTGGCTCCTCCTCTGCGCAGGAGATGACTGCGAACAGCTCTTaGAGGCAGGGCAGGATGGCGGCGGGCTGTGCGCGCCACAGCTGC +
Preference number: 6 (lower is better)
Translates to: DGGSSSAQEMTANSS*RQGRMAAGCARHSC
Trigger: GCAGCTGTGGCGCGCACAGCCCGCCGCCATCCTGCCCTGCCTCAAAGAGCTGTTCGCAGTCATCTCCTGCGCAGAGGAGGAGCCACCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS TCA 72 bp CCTCCAGCACGCGCCGAACCAGCCCCTGCTTCACGCTaGCCGGGTATGACGACGTCACCACCGCCTCCAAGA +
Preference number: 6 (lower is better)
Translates to: PPARAEPAPASR*PGMTTSPPPPR
Trigger: TCTTGGAGGCGGTGGTGACGTCGTCATACCCGGTCAGCGTGAAGCAGGGGCTGGTTCGGCGCGTGCTGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS CAA 72 bp TCCTCCTCTGCGCAGGAGATGACTGCGAACAGCTCTTaGAGGCAGGGCAGGATGGCGGCGGGCTGTGCGCGC +
Preference number: 6 (lower is better)
Translates to: SSSAQEMTANSS*RQGRMAAGCAR
Trigger: GCGCGCACAGCCCGCCGCCATCCTGCCCTGCCTCAAAGAGCTGTTCGCAGTCATCTCCTGCGCAGAGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS CAA 72 bp GCATCCTGCCCCAGCAGCTGCTTGATGCGGTCCTCATaGGGAACATGGAGGTCCTCCCGGACCCCGGTGGGC +
Preference number: 6 (lower is better)
Translates to: ASCPSSCLMRSS*GTWRSSRTPVG
Trigger: GCCCACCGGGGTCCGGGAGGACCTCCATGTTCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGCAGGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530267.5
CDS CCA 72 bp TGGGAGGTGCTGGACCACGCTGGCCAGGGCGCTAGATaGTGGCTCCTCCTCTGCGCAGGAGATGACTGCGAA +
Preference number: 6 (lower is better)
Translates to: WEVLDHAGQGAR*WLLLCAGDDCE
Trigger: TTCGCAGTCATCTCCTGCGCAGAGGAGGAGCCACCATCTAGCGCCCTGGCCAGCGTGGTCCAGCACCTCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529308.6
ENST00000530546.5
CDS CCA 72 bp CGGACAACACCATCCATGAGCTCCAATGGGAGGTGCTaGACCACGCTGGCCAGGGCGCTAGATGGTGGCTCC +
Preference number: 6 (lower is better)
Translates to: RTTPSMSSNGRC*TTLARALDGGS
Trigger: GGAGCCACCATCTAGCGCCCTGGCCAGCGTGGTCCAGCACCTCCCATTGGAGCTCATGGATGGTGTTGTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528910.5
ENST00000529308.6
ENST00000530546.5
CDS CAA 90 bp AGCTCGCTCTTCTGCGAAGTCCAGGCATCCTGCCCCAGCAGCTGCTaGATGCGGTCCTCATTGGGAACATGGAGGTCCTCCCGGACCCCG +
Preference number: 6 (lower is better)
Translates to: SSLFCEVQASCPSSC*MRSSLGTWRSSRTP
Trigger: CGGGGTCCGGGAGGACCTCCATGTTCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGCAGGATGCCTGGACTTCGCAGAAGAGCGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530267.5
CDS TCA 72 bp GCGCCGAACCAGCCCCTGCTTCACGCTGACCGGGTATaGCGACGTCACCACCGCCTCCAAGATCTTGTCCAT +
Preference number: 6 (lower is better)
Translates to: APNQPLLHADRV*RRHHRLQDLVH
Trigger: ATGGACAAGATCTTGGAGGCGGTGGTGACGTCGTCATACCCGGTCAGCGTGAAGCAGGGGCTGGTTCGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529308.6
CDS GCA 72 bp TTCCGGACAACACCATCCATGAGCTCCAATGGGAGGTaGTGGACCACGCTGGCCAGGGCGCTAGATGGTGGC +
Preference number: 6 (lower is better)
Translates to: FRTTPSMSSNGR*WTTLARALDGG
Trigger: GCCACCATCTAGCGCCCTGGCCAGCGTGGTCCAGCACCTCCCATTGGAGCTCATGGATGGTGTTGTCCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528910.5
ENST00000529308.6
ENST00000530546.5
CDS GCA 72 bp GCCCCTGGGCCAGAAGCTTTGGCTCCAGCAAGTCCTTaGTGTGTGACCCAGAGCAAGCCACTTCCCCGCTCT +
Preference number: 6 (lower is better)
Translates to: APGPEALAPASP*CVTQSKPLPRS
Trigger: AGAGCGGGGAAGTGGCTTGCTCTGGGTCACACAGCAAGGACTTGCTGGAGCCAAAGCTTCTGGCCCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS CCA 72 bp GCTGAGGTTCCGGACAACACCATCCATGAGCTCCAATaGGAGGTGCTGGACCACGCTGGCCAGGGCGCTAGA +
Preference number: 6 (lower is better)
Translates to: AEVPDNTIHELQ*EVLDHAGQGAR
Trigger: TCTAGCGCCCTGGCCAGCGTGGTCCAGCACCTCCCATTGGAGCTCATGGATGGTGTTGTCCGGAACCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528910.5
ENST00000529308.6
ENST00000530546.5
CDS CCA 72 bp GGGGTGAGGGCAGCCCAGGGGCTATCCGTAATGTCCTaGGTTCCCACATTGACTCACACCTGCAAAGGGCAG +
Preference number: 6 (lower is better)
Translates to: GVRAAQGLSVMS*VPTLTHTCKGQ
Trigger: CTGCCCTTTGCAGGTGTGAGTCAATGTGGGAACCCAGGACATTACGGATAGCCCCTGGGCTGCCCTCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS CAA 72 bp GCTTCGTGGGAGTGCTGGAAGGTCAGGAGCATGTACTaGAGCACAGACAAGGCAGCTCCCCGGACGATGGGG +
Preference number: 6 (lower is better)
Translates to: ASWECWKVRSMY*STDKAAPRTMG
Trigger: CCCCATCGTCCGGGGAGCTGCCTTGTCTGTGCTCAAGTACATGCTCCTGACCTTCCAGCACTCCCACGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000528910.5
ENST00000529308.6
ENST00000530546.5
CDS CAA 90 bp AGGTGGAAGGCTTCGTGGGAGTGCTGGAAGGTCAGGAGCATGTACTaGAGCACAGACAAGGCAGCTCCCCGGACGATGGGGTACAGCAGC +
Preference number: 6 (lower is better)
Translates to: RWKASWECWKVRSMY*STDKAAPRTMGYSS
Trigger: GCTGCTGTACCCCATCGTCCGGGGAGCTGCCTTGTCTGTGCTCAAGTACATGCTCCTGACCTTCCAGCACTCCCACGAAGCCTTCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526425.1
ENST00000528910.5
ENST00000529308.6
ENST00000530546.5
CDS CCA 72 bp TTGACTCACACCTGCAAAGGGCAGCCCCGGGGTCTGTaGGCTGAACCAGACATGGCTGGGAAATGCACAAGC +
Preference number: 6 (lower is better)
Translates to: LTHTCKGQPRGL*AEPDMAGKCTS
Trigger: GCTTGTGCATTTCCCAGCCATGTCTGGTTCAGCCCACAGACCCCGGGGCTGCCCTTTGCAGGTGTGAGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526425.1
CDS CAA 72 bp TTCTGCGAAGTCCAGGCATCCTGCCCCAGCAGCTGCTaGATGCGGTCCTCATTGGGAACATGGAGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: FCEVQASCPSSC*MRSSLGTWRSS
Trigger: GGAGGACCTCCATGTTCCCAATGAGGACCGCATCAAGCAGCTGCTGGGGCAGGATGCCTGGACTTCGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530267.5
CDS CAA 72 bp ACAGCAGCCAGGCCCTTCAGCAGTGCAATGATCCACTaGTCAATATTCTTCCCCAGGGGCCAGGACACCCAG +
Preference number: 6 (lower is better)
Translates to: TAARPFSSAMIH*SIFFPRGQDTQ
Trigger: CTGGGTGTCCTGGCCCCTGGGGAAGAATATTGACAAGTGGATCATTGCACTGCTGAAGGGCCTGGCTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526425.1
ENST00000528910.5
ENST00000529308.6
CDS CAA 72 bp GCAGTCAGCATCTGCGAGTCTGTCACACTGTCATCATaGCTGAGGTTCCGGACAACACCATCCATGAGCTCC +
Preference number: 6 (lower is better)
Translates to: AVSICESVTLSS*LRFRTTPSMSS
Trigger: GGAGCTCATGGATGGTGTTGTCCGGAACCTCAGCAATGATGACAGTGTGACAGACTCGCAGATGCTGACTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528910.5
ENST00000529308.6
ENST00000530546.5
CDS CAA 90 bp CTGCTAATGGCAGTCAGCATCTGCGAGTCTGTCACACTGTCATCATaGCTGAGGTTCCGGACAACACCATCCATGAGCTCCAATGGGAGG +
Preference number: 6 (lower is better)
Translates to: LLMAVSICESVTLSS*LRFRTTPSMSSNGR
Trigger: CCTCCCATTGGAGCTCATGGATGGTGTTGTCCGGAACCTCAGCAATGATGACAGTGTGACAGACTCGCAGATGCTGACTGCCATTAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528910.5
ENST00000529308.6
ENST00000530546.5
CDS GCA 72 bp ACCCAGTCAATCATCCTGCTAATGGCAGTCAGCATCTaGGAGTCTGTCACACTGTCATCATTGCTGAGGTTC +
Preference number: 6 (lower is better)
Translates to: TQSIILLMAVSI*ESVTLSSLLRF
Trigger: GAACCTCAGCAATGATGACAGTGTGACAGACTCGCAGATGCTGACTGCCATTAGCAGGATGATTGACTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528910.5
ENST00000529308.6
CDS TCA 72 bp GAGGAGGAGCAGGTGAACAACTCAGCCTGGGGTATCTaGGGTCAGGAACACAACAATAGACATGTTTTAGAC +
Preference number: 6 (lower is better)
Translates to: EEEQVNNSAWGI*GQEHNNRHVLD
Trigger: GTCTAAAACATGTCTATTGTTGTGTTCCTGACCTCAGATACCCCAGGCTGAGTTGTTCACCTGCTCCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530521.1