Pregenerated sensors for USP34-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000270820Ensembl transcript IDs: ENST00000578974.2, ENST00000603028.5, ENST00000603199.2, ENST00000603652.2, ENST00000605437.1, ENST00000664869.1
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GACCTGGCGCTCCCCGGGCCTCAGAGCCCGTGGAGTGGGTCGTGGTaGGCGACGCCACGCAACCGCGACCCGTCCGTTGCCTCCGCCATC | + |
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Preference number: 5 (lower is better) Translates to: DLALPGPQSPWSGSW*ATPRNRDPSVASAI Trigger: GATGGCGGAGGCAACGGACGGGTCGCGGTTGCGTGGCGTCGCCCACCACGACCCACTCCACGGGCTCTGAGGCCCGGGGAGCGCCAGGTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000603199.2 ENST00000664869.1 |
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| CDS CCA 90 bp | AGTGACCTGGCGCTCCCCGGGCCTCAGAGCCCGTGGAGTGGGTCGTaGTGGGCGACGCCACGCAACCGCGACCCGTCCGTTGCCTCCGCC | + |
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Preference number: 5 (lower is better) Translates to: SDLALPGPQSPWSGS*WATPRNRDPSVASA Trigger: GGCGGAGGCAACGGACGGGTCGCGGTTGCGTGGCGTCGCCCACCACGACCCACTCCACGGGCTCTGAGGCCCGGGGAGCGCCAGGTCACT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000603199.2 ENST00000664869.1 |
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| CDS GCA 90 bp | ACGTCAAGGATCTTACTGCTCCAGGACGGAGGACCTTCAAGGAACTaGAGGGTAGCGATAATCACCGATGCAGTTAAGCCGGGCCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: TSRILLLQDGGPSRN*RVAIITDAVKPGPG Trigger: CCCAGGGCCCGGCTTAACTGCATCGGTGATTATCGCTACCCTGCAGTTCCTTGAAGGTCCTCCGTCCTGGAGCAGTAAGATCCTTGACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000603199.2 ENST00000664869.1 |
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| CDS TCA 72 bp | GCGGCCGCGCTGGCTTCGCGTTTCCCTTCCGGCCGCTaGCAGAGATCCGGGCTGGGCGGGGTGGGCGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: AAALASRFPSGR*QRSGLGGVGER Trigger: GCGCTCGCCCACCCCGCCCAGCCCGGATCTCTGTCAGCGGCCGGAAGGGAAACGCGAAGCCAGCGCGGCCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603652.2 |
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| CDS CCA 72 bp | CTCCCCGGGCCTCAGAGCCCGTGGAGTGGGTCGTGGTaGGCGACGCCACGCAACCGCGACCCGTCCGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: LPGPQSPWSGSW*ATPRNRDPSVA Trigger: GGCAACGGACGGGTCGCGGTTGCGTGGCGTCGCCCACCACGACCCACTCCACGGGCTCTGAGGCCCGGGGAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000603199.2 ENST00000664869.1 |
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| CDS CCA 72 bp | GCGCTCCCCGGGCCTCAGAGCCCGTGGAGTGGGTCGTaGTGGGCGACGCCACGCAACCGCGACCCGTCCGTT | + |
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Preference number: 6 (lower is better) Translates to: ALPGPQSPWSGS*WATPRNRDPSV Trigger: AACGGACGGGTCGCGGTTGCGTGGCGTCGCCCACCACGACCCACTCCACGGGCTCTGAGGCCCGGGGAGCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000603199.2 ENST00000664869.1 |
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| CDS GCA 72 bp | GTGGTGGGCGACGCCACGCAACCGCGACCCGTCCGTTaGCTCCGCCATCTTCTCCTACTCACCCGGACTCCC | + |
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Preference number: 6 (lower is better) Translates to: VVGDATQPRPVR*LRHLLLLTRTP Trigger: GGGAGTCCGGGTGAGTAGGAGAAGATGGCGGAGGCAACGGACGGGTCGCGGTTGCGTGGCGTCGCCCACCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000603199.2 ENST00000664869.1 |
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| CDS CAA 72 bp | CGTGGTGGGCGACGCCACGCAACCGCGACCCGTCCGTaGCCTCCGCCATCTTCTCCTACTCACCCGGACTCC | + |
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Preference number: 6 (lower is better) Translates to: RGGRRHATATRP*PPPSSPTHPDS Trigger: GGAGTCCGGGTGAGTAGGAGAAGATGGCGGAGGCAACGGACGGGTCGCGGTTGCGTGGCGTCGCCCACCACG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000603199.2 ENST00000664869.1 |
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| CDS TCA 72 bp | AGAGAATTGCTTGAACCCACGAGGCAAAGGTTGCGGTaGGCCGAGATCACGTCATTGCACTCCAACCCGGAC | + |
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Preference number: 6 (lower is better) Translates to: RELLEPTRQRLR*AEITSLHSNPD Trigger: GTCCGGGTTGGAGTGCAATGACGTGATCTCGGCTCACCGCAACCTTTGCCTCGTGGGTTCAAGCAATTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603652.2 |
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| CDS TCA 72 bp | AGAGAATTGCTTGAACCCACGAGGCAAAGGTTGCGGTaGGCCGAGATCACGTCATTGCACTCCAACCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: RELLEPTRQRLR*AEITSLHSNLG Trigger: ACCCAGGTTGGAGTGCAATGACGTGATCTCGGCTCACCGCAACCTTTGCCTCGTGGGTTCAAGCAATTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603199.2 |
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| CDS GCA 72 bp | AGGCAAGAGAATTGCTTGAACCCACGAGGCAAAGGTTaGGGTGAGCCGAGATCACGTCATTGCACTCCAACC | + |
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Preference number: 6 (lower is better) Translates to: RQENCLNPRGKG*GEPRSRHCTPT Trigger: GGTTGGAGTGCAATGACGTGATCTCGGCTCACCGCAACCTTTGCCTCGTGGGTTCAAGCAATTCTCTTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000603199.2 ENST00000603652.2 |
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| CDS GCA 72 bp | ATCTTACTGCTCCAGGACGGAGGACCTTCAAGGAACTaGAGGGTAGCGATAATCACCGATGCAGTTAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: ILLLQDGGPSRN*RVAIITDAVKP Trigger: CGGCTTAACTGCATCGGTGATTATCGCTACCCTGCAGTTCCTTGAAGGTCCTCCGTCCTGGAGCAGTAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000603199.2 ENST00000664869.1 |
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| CDS TCA 72 bp | AAGATGTTCTTTTATTCATTTGCCTATTCGGGAGGCTaGGGCAGGAGAATGGCTTGGACCGAGGAGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: KMFFYSFAYSGG*GRRMAWTEEAE Trigger: CTCTGCCTCCTCGGTCCAAGCCATTCTCCTGCCTCAGCCTCCCGAATAGGCAAATGAATAAAAGAACATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578974.2 |
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| CDS TCA 72 bp | AAAAGATACAATAAAAATACTGGGCATGGTGGCATGTaGTTGCAATCCCACCTATTCGGGAGGCTGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: KRYNKNTGHGGM*LQSHLFGRLRQ Trigger: CTGCCTCAGCCTCCCGAATAGGTGGGATTGCAATCACATGCCACCATGCCCAGTATTTTTATTGTATCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000603028.5 ENST00000603199.2 ENST00000603652.2 ENST00000664869.1 |
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| CDS CAA 72 bp | TTGAGTTATGGGGAGAGCGGCCTAGTAATAATTGGTTaGCGTAATACAAAGTTCTACTGGGTAGTGATGTTG | + |
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Preference number: 6 (lower is better) Translates to: LSYGESGLVIIG*RNTKFYWVVML Trigger: CAACATCACTACCCAGTAGAACTTTGTATTACGCAAACCAATTATTACTAGGCCGCTCTCCCCATAACTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000603199.2 ENST00000603652.2 ENST00000605437.1 ENST00000664869.1 |
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| CDS CAA 72 bp | GAACTTTTTCTTACTACTTCAGGCTGTCAATTCTCATaGTTTCCCAGCATTCCTTGCTATTCCACCTACACA | + |
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Preference number: 6 (lower is better) Translates to: ELFLTTSGCQFS*FPSIPCYSTYT Trigger: TGTGTAGGTGGAATAGCAAGGAATGCTGGGAAACAATGAGAATTGACAGCCTGAAGTAGTAAGAAAAAGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000578974.2 |
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| CDS CAA 90 bp | TTCCCAGCATTCCTTGCTATTCCACCTACACAGTTTAAACTTGTTTaGGATTCCATCATTTGGGCTTTCAAACATACTATGAGGAATGTC | + |
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Preference number: 6 (lower is better) Translates to: FPAFLAIPPTQFKLV*DSIIWAFKHTMRNV Trigger: GACATTCCTCATAGTATGTTTGAAAGCCCAAATGATGGAATCCAAAACAAGTTTAAACTGTGTAGGTGGAATAGCAAGGAATGCTGGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578974.2 |
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| CDS CAA 72 bp | TTCCTTGCTATTCCACCTACACAGTTTAAACTTGTTTaGGATTCCATCATTTGGGCTTTCAAACATACTATG | + |
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Preference number: 6 (lower is better) Translates to: FLAIPPTQFKLV*DSIIWAFKHTM Trigger: CATAGTATGTTTGAAAGCCCAAATGATGGAATCCAAAACAAGTTTAAACTGTGTAGGTGGAATAGCAAGGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578974.2 |
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