RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP33 (Homo sapiens)

Ensembl gene IDs: ENSG00000077254

Ensembl transcript IDs: ENST00000357428.5, ENST00000370792.7, ENST00000370793.5, ENST00000370794.7, ENST00000461986.5, ENST00000462192.1, ENST00000472462.1, ENST00000481579.5, ENST00000498328.1, ENST00000524536.5, ENST00000524778.1, ENST00000525113.5, ENST00000527390.1, ENST00000528150.1, ENST00000530709.5, ENST00000531637.5, ENST00000533928.1

Found 327 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAAGGTGGAGGCTGCAGTaGGCTGAGGTAACACCACAG +
Preference number: 2 (lower is better)
Translates to: TIVVTHSTLHALKIKSALRWRLQ*AEVTPQ
Trigger: CTGTGGTGTTACCTCAGCTCACTGCAGCCTCCACCT...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
3UTR-3UTR TCA 90 bp CGCCTCAATTTGGCAAGTATGACAAATGTACAGATGGTTGACAGCTGGTCCTCCTTATCCCAAATGTTCTaGGGCAGCATCAAAACCAGG +
Preference number: 2 (lower is better)
Translates to: RLNLASMTNVQMVDSWSSLSQMF*GSIKTR
Trigger: CCTGGTTTTGATGCTGCCTCAGAACATTTGGGATAA...GGAGGACCAGCTGTCAACCATCTGTACATTTGTCATACTTGCCAAATTGAGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527390.1
3UTR-3UTR TCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGGTGGAGGCTGCAGTaGGCTGAGGTAACACCACAG +
Preference number: 2 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKRWRLQ*AEVTPQ
Trigger: CTGTGGTGTTACCTCAGCTCACTGCAGCCTCCACCT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
3UTR-3UTR TCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAGGGCTTTTGGAGAACTaGAAGACTGGTCAGAGTCAG +
Preference number: 2 (lower is better)
Translates to: TIVVTHSTLHALKIKSALGLLEN*KTGQSQ
Trigger: CTGACTCTGACCAGTCTTTCAGTTCTCCAAAAGCCC...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
3UTR-3UTR TCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAATATCTGGATCAACATaGACAACCGGAGGTCGCAGG +
Preference number: 2 (lower is better)
Translates to: TIVVTHSTLHALKIKSALISGST*TTGGRR
Trigger: CCTGCGACCTCCGGTTGTTCATGTTGATCCAGATAT...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481579.5
3UTR-3UTR TCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACTGGTCAGAGTCAGGGTaGTTTAGGACAATGAAAAAG +
Preference number: 2 (lower is better)
Translates to: TLYNISGNKLLISADKFHWSESG*FRTMKK
Trigger: CTTTTTCATTGTCCTAAATCACCCTGACTCTGACCA...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
3UTR-3UTR TCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAATGGTCAGAGTCAGGGTaGTTTAGGACAATGAAAAAG +
Preference number: 2 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKWSESG*FRTMKK
Trigger: CTTTTTCATTGTCCTAAATCACCCTGACTCTGACCA...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
3UTR-3UTR TCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAGCGGCAATAAGTTACTaGTATCTGCTGACAAATTCC +
Preference number: 2 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKAAISY*YLLTNS
Trigger: GGAATTTGTCAGCAGATATCAGTAACTTATTGCCGC...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
3UTR-3UTR CCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAATGCTTGAAGTATATCTaGATCAACATGAACAACCGG +
Preference number: 2 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKCLKYI*INMNNR
Trigger: CCGGTTGTTCATGTTGATCCAGATATACTTCAAGCA...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481579.5
3UTR GCA 72 bp GCTAATTTTAACAACATTGCTTTAGCTGGTGACAGCTaGCCCAAACCAAAACAAAGCCATCATGAATGCTAT +
Preference number: 3 (lower is better)
Translates to: ANFNNIALAGDS*PKPKQSHHECY
Trigger: ATAGCATTCATGATGGCTTTGTTTTGGTTTGGGGCAGCTGTCACCAGCTAAAGCAATGTTGTTAAAATTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAAACACCTCCACGGCCTaGCCCGCGGGACCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALNTSTA*PAGPAS
Trigger: GCTGGCGGGTCCCGCGGGCCAGGCCGTGGAGGTGTT...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370794.7
CDS-3UTR GCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTACGACCAACAACGGCCTaGAGCCGCACCTCCGCAAGC +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALRPTTA*SRTSAS
Trigger: GCTTGCGGAGGTGCGGCTGCAGGCCGTTGTTGGTCG...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp CGCCTCAATTTGGCAAGTATGACAAATGTACAGATGGTTGACAGCTGGTCCTCCCAGATGGTTGACAGCTaGTCCTCCACCATACCTGCT +
Preference number: 4 (lower is better)
Translates to: RLNLASMTNVQMVDSWSSQMVDS*SSTIPA
Trigger: AGCAGGTATGGTGGAGGACCAGCTGTCAACCATCTG...GGAGGACCAGCTGTCAACCATCTGTACATTTGTCATACTTGCCAAATTGAGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527390.1
CDS-3UTR GCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACCGACCAACAACGGCCTaGAGCCGCACCTCCGCAAGC +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHRPTTA*SRTSAS
Trigger: GCTTGCGGAGGTGCGGCTGCAGGCCGTTGTTGGTCG...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAGTCCGCCTCCTGAACTaGCCACTTCCCGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKVRLLN*PLPAAA
Trigger: GGCTGCTGCGGGAAGTGGCCAGTTCAGGAGGCGGAC...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACGTCCGCCTCCTGAACTaGCCACTTCCCGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHVRLLN*PLPAAA
Trigger: GGCTGCTGCGGGAAGTGGCCAGTTCAGGAGGCGGAC...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370793.5
ENST00000370794.7
CDS-3UTR TCA 90 bp CGCCTCAATTTGGCAAGTATGACAAATGTACAGATGGTTGACAGCTGGTCCTCCCTACTTGCAGTTCCATaGTGGCAAATGACTGACAGA +
Preference number: 4 (lower is better)
Translates to: RLNLASMTNVQMVDSWSSLLAVP*WQMTDR
Trigger: TCTGTCAGTCATTTGCCATCATGGAACTGCAAGTAG...GGAGGACCAGCTGTCAACCATCTGTACATTTGTCATACTTGCCAAATTGAGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527390.1
CDS-3UTR TCA 90 bp TTTCTTCTGCTTGAAGTATATCTGGATCAACATGAACAACCGGAGGTCGCAGGAATATCTGGATCAACATaGACAACCGGAGGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: FLLLEVYLDQHEQPEVAGISGST*TTGGRR
Trigger: CCTGCGACCTCCGGTTGTTCATGTTGATCCAGATAT...TCCTGCGACCTCCGGTTGTTCATGTTGATCCAGATATACTTCAAGCAGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481579.5
CDS-3UTR TCA 90 bp TTTCTTCTGCTTGAAGTATATCTGGATCAACATGAACAACCGGAGGTCGCAGGAGGGCTTTTGGAGAACTaGAAGACTGGTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: FLLLEVYLDQHEQPEVAGGLLEN*KTGQSQ
Trigger: CTGACTCTGACCAGTCTTTCAGTTCTCCAAAAGCCC...TCCTGCGACCTCCGGTTGTTCATGTTGATCCAGATATACTTCAAGCAGAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481579.5
CDS-3UTR TCA 90 bp TTGGCAAGTATGACAAATGTACAGATGGTTGACAGCTGGTCCTCCACCATACCTTTATCCCAAATGTTCTaGGGCAGCATCAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: LASMTNVQMVDSWSSTIPLSQMF*GSIKTR
Trigger: CCTGGTTTTGATGCTGCCTCAGAACATTTGGGATAA...AGGTATGGTGGAGGACCAGCTGTCAACCATCTGTACATTTGTCATACTTGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527390.1
CDS-3UTR TCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCGGGCTTTTGGAGAACTaGAAGACTGGTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGGLLEN*KTGQSQ
Trigger: CTGACTCTGACCAGTCTTTCAGTTCTCCAAAAGCCC...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCCATTGCTTTAGCTGGTaGCAGCTGCCCCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGHCFSW*QLPQTK
Trigger: TTTGGTTTGGGGCAGCTGTCACCAGCTAAAGCAATG...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCCCAAGACTTTCAAAATaGGGTAACACCTCCACGGCC +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGPRLSK*GNTSTA
Trigger: GGCCGTGGAGGTGTTACCTCATTTTGAAAGTCTTGG...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370794.7
CDS-3UTR GCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCCAACAGATCCTGGCCTaGTTTTATGCCACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGQQILA*FYATAL
Trigger: CAGAGCTGTGGCATAAAAGCAGGCCAGGATCTGTTG...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR GCA 90 bp CGCCTCAATTTGGCAAGTATGACAAATGTACAGATGGTTGACAGCTGGTCCTCCGTCCTCCACCATACCTaGTATATAGGTTATCCCAAA +
Preference number: 4 (lower is better)
Translates to: RLNLASMTNVQMVDSWSSVLHHT*YIGYPK
Trigger: TTTGGGATAACCTATATAGCAGGTATGGTGGAGGAC...GGAGGACCAGCTGTCAACCATCTGTACATTTGTCATACTTGCCAAATTGAGGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527390.1
CDS-3UTR CCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCAGCTATCCACCCTTGTaGAGCATATGCTTCGCCACA +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGSYPPL*SICFAT
Trigger: TGTGGCGAAGCATATGCTCCACAAGGGTGGATAGCT...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp CGCCTCAATTTGGCAAGTATGACAAATGTACAGATGGTTGACAGCTGGTCCTCCATCCTTAGCAAGAAATaGCTGAAGATCCAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: RLNLASMTNVQMVDSWSSILSKK*LKIQAF
Trigger: GAAGGCTTGGATCTTCAGCCATTTCTTGCTAAGGAT...GGAGGACCAGCTGTCAACCATCTGTACATTTGTCATACTTGCCAAATTGAGGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527390.1
CDS-3UTR CCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCGGCATGTTTTTGCAGTaGCTGGTACCGGTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGGMFLQ*LVPVVP
Trigger: AGGAACAACCGGTACCAGCCACTGCAAAAACATGCC...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370793.5
CDS-3UTR TCA 90 bp CGCCTCAATTTGGCAAGTATGACAAATGTACAGATGGTTGACAGCTGGTCCTCCTTCCATGATGGCAAATaGCTGACAGAAGATCATATG +
Preference number: 4 (lower is better)
Translates to: RLNLASMTNVQMVDSWSSFHDGK*LTEDHM
Trigger: CATATGATCTTCTGTCAGTCATTTGCCATCATGGAA...GGAGGACCAGCTGTCAACCATCTGTACATTTGTCATACTTGCCAAATTGAGGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527390.1
CDS-3UTR TCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACAGGTGGAGGCTGCAGTaGGCTGAGGTAACACCACAG +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHRWRLQ*AEVTPQ
Trigger: CTGTGGTGTTACCTCAGCTCACTGCAGCCTCCACCT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp TTTCTTCTGCTTGAAGTATATCTGGATCAACATGAACAACCGGAGGTCGCAGGAGCTCTGCTGTGTATTTaGACTTTGACAGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FLLLEVYLDQHEQPEVAGALLCI*TLTVSW
Trigger: CCAGGAAACTGTCAAAGTGCAAATACACAGCAGAGC...TCCTGCGACCTCCGGTTGTTCATGTTGATCCAGATATACTTCAAGCAGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481579.5
CDS-3UTR CCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCTTGCAAGGTTACTACTaGACCCCAAAACCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGLQGYY*TPKPAR
Trigger: CCTAGCTGGTTTTGGGGTCCAGTAGTAACCTTGCAA...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTACAGATGGTTGACAGCTaGTCCTCCACCATACCTGCT +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALQMVDS*SSTIPA
Trigger: AGCAGGTATGGTGGAGGACCAGCTGTCAACCATCTG...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAACAGATGGTTGACAGCTaGTCCTCCACCATACCTGCT +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKQMVDS*SSTIPA
Trigger: AGCAGGTATGGTGGAGGACCAGCTGTCAACCATCTG...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCGCTGTGATCTACTTGTaGTTCACCACAGCCAACATA +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGAVIYL*FTTANI
Trigger: TATGTTGGCTGTGGTGAATCACAAGTAGATCACAGC...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR TCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAGGCAAGGACAGATCTTaGAAGGTCTCGAGGGTTACA +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKGKDRS*KVSRVT
Trigger: TGTAACCCTCGAGACCTTTCAAGATCTGTCCTTGCC...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAACCAGCTAGGGACACATaGGACAACAAACCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKPARDT*DNKPLH
Trigger: GTGAAGAGGTTTGTTGTCTCATGTGTCCCTAGCTGG...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCCTACTTGCAGTTCCATaGTGGCAAATGACTGACAGA +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGLLAVP*WQMTDR
Trigger: TCTGTCAGTCATTTGCCATCATGGAACTGCAAGTAG...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCTTATCCCAAATGTTCTaGGGCAGCATCAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGLSQMF*GSIKTR
Trigger: CCTGGTTTTGATGCTGCCTCAGAACATTTGGGATAA...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAATATCTGGATCAACATaGACAACCGGAGGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKISGST*TTGGRR
Trigger: CCTGCGACCTCCGGTTGTTCATGTTGATCCAGATAT...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAACAACAGATCCTGGCCTaGTTTTATGCCACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKQQILA*FYATAL
Trigger: CAGAGCTGTGGCATAAAAGCAGGCCAGGATCTGTTG...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR GCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCGCTCTGCTGTGTATTTaGACTTTGACAGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGALLCI*TLTVSW
Trigger: CCAGGAAACTGTCAAAGTGCAAATACACAGCAGAGC...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAAGCTATCCACCCTTGTaGAGCATATGCTTCGCCACA +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKSYPPL*SICFAT
Trigger: TGTGGCGAAGCATATGCTCCACAAGGGTGGATAGCT...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp TTTCTTCTGCTTGAAGTATATCTGGATCAACATGAACAACCGGAGGTCGCAGGAATCCTTAGCAAGAAATaGCTGAAGATCCAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: FLLLEVYLDQHEQPEVAGILSKK*LKIQAF
Trigger: GAAGGCTTGGATCTTCAGCCATTTCTTGCTAAGGAT...TCCTGCGACCTCCGGTTGTTCATGTTGATCCAGATATACTTCAAGCAGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481579.5
CDS-3UTR TCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCACCACAGCCAACATATaGACATCTATTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGTTANI*TSILQT
Trigger: TGTCTGGAGAATAGATGTTCATATGTTGGCTGTGGT...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR TCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCTCGAATGGACATCAGTaGTATATTCTGAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGSNGHQ*YILKLC
Trigger: GCAGAGCTTCAGAATATATCACTGATGTCCATTCGA...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCAGTCAGACACTGCACTaGACTAATGATTGTTCCATC +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGSQTLH*TNDCSI
Trigger: GATGGAACAATCATTAGTTCAGTGCAGTGTCTGACT...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp AGTATGACAAATGTACAGATGGTTGACAGCTGGTCCTCCACCATACCTGCTATAACTTCAGTGACACTCTaGTCATCAAATTCATACCAG +
Preference number: 4 (lower is better)
Translates to: SMTNVQMVDSWSSTIPAITSVTL*SSNSYQ
Trigger: CTGGTATGAATTTGATGATCAGAGTGTCACTGAAGT...TATAGCAGGTATGGTGGAGGACCAGCTGTCAACCATCTGTACATTTGTCATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527390.1
CDS-3UTR TCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCTGGTCAGAGTCAGGGTaGTTTAGGACAATGAAAAAG +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGWSESG*FRTMKK
Trigger: CTTTTTCATTGTCCTAAATCACCCTGACTCTGACCA...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTACCTGGCCTGCTTTTATaGCACAGCTCTGTCATTAGT +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALPGLLL*HSSVIS
Trigger: ACTAATGACAGAGCTGTGGCATAAAAGCAGGCCAGG...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR GCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAACCTGGCCTGCTTTTATaGCACAGCTCTGTCATTAGT +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKPGLLL*HSSVIS
Trigger: ACTAATGACAGAGCTGTGGCATAAAAGCAGGCCAGG...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR GCA 90 bp CGCCTCAATTTGGCAAGTATGACAAATGTACAGATGGTTGACAGCTGGTCCTCCAAGAACGTAAGCTTCTaGATTTTGTACAGTAGATTC +
Preference number: 4 (lower is better)
Translates to: RLNLASMTNVQMVDSWSSKNVSF*ILYSRF
Trigger: GAATCTACTGTACAAAATGCAGAAGCTTACGTTCTT...GGAGGACCAGCTGTCAACCATCTGTACATTTGTCATACTTGCCAAATTGAGGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527390.1
CDS-3UTR GCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAATTAGCTGGTGACAGCTaGCCCAAACCAAAACAAAGC +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKLAGDS*PKPKQS
Trigger: GCTTTGTTTTGGTTTGGGGCAGCTGTCACCAGCTAA...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTATTAGCTGGTGACAGCTaGCCCAAACCAAAACAAAGC +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALLAGDS*PKPKQS
Trigger: GCTTTGTTTTGGTTTGGGGCAGCTGTCACCAGCTAA...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCAAACTGTGTCAAAGGTaGGCAATTAGAAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGKLCQR*AIRKSL
Trigger: CAGGCTCTTTCTAATTGCCCACCTTTGACACAGTTT...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTATTGCAAGGTTACTACTaGACCCCAAAACCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALLQGYY*TPKPAR
Trigger: CCTAGCTGGTTTTGGGGTCCAGTAGTAACCTTGCAA...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp TTGGCAAGTATGACAAATGTACAGATGGTTGACAGCTGGTCCTCCACCATACCTCTGAATCTTTTAAGGTaGATGCACAAAATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LASMTNVQMVDSWSSTIPLNLLR*MHKISG
Trigger: TCCTGAGATTTTGTGCATCCACCTTAAAAGATTCAG...AGGTATGGTGGAGGACCAGCTGTCAACCATCTGTACATTTGTCATACTTGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527390.1
CDS-3UTR CCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCATCCTTAGCAAGAAATaGCTGAAGATCCAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGILSKK*LKIQAF
Trigger: GAAGGCTTGGATCTTCAGCCATTTCTTGCTAAGGAT...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp TTGGCAAGTATGACAAATGTACAGATGGTTGACAGCTGGTCCTCCACCATACCTTGTCACAATTTGAGCTaGACTATCCTTAGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: LASMTNVQMVDSWSSTIPCHNLS*TILSKK
Trigger: TTTCTTGCTAAGGATAGTCCAGCTCAAATTGTGACA...AGGTATGGTGGAGGACCAGCTGTCAACCATCTGTACATTTGTCATACTTGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527390.1
CDS-3UTR CCA 90 bp TTTCTTCTGCTTGAAGTATATCTGGATCAACATGAACAACCGGAGGTCGCAGGAATAACCAGCTTTTCTTaGAGGAACACCTCCATGAAT +
Preference number: 4 (lower is better)
Translates to: FLLLEVYLDQHEQPEVAGITSFS*RNTSMN
Trigger: ATTCATGGAGGTGTTCCTCCAAGAAAAGCTGGTTAT...TCCTGCGACCTCCGGTTGTTCATGTTGATCCAGATATACTTCAAGCAGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481579.5
CDS-3UTR CCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAACAGATGGTTGACAGCTaGTCCTCCACCATACCTGCT +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKQMVDS*SSTIPA
Trigger: AGCAGGTATGGTGGAGGACCAGCTGTCAACCATCTG...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAGGAGAGTCCTCTTTTTaGAACGCTCTGTTAAGCCGA +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALGESSF*NALLSR
Trigger: TCGGCTTAACAGAGCGTTCCAAAAAGAGGACTCTCC...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR TCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAGGCAAGGACAGATCTTaGAAGGTCTCGAGGGTTACA +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKGKDRS*KVSRVT
Trigger: TGTAACCCTCGAGACCTTTCAAGATCTGTCCTTGCC...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACGGCAAGGACAGATCTTaGAAGGTCTCGAGGGTTACA +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHGKDRS*KVSRVT
Trigger: TGTAACCCTCGAGACCTTTCAAGATCTGTCCTTGCC...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACCCAGCTAGGGACACATaGGACAACAAACCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHPARDT*DNKPLH
Trigger: GTGAAGAGGTTTGTTGTCTCATGTGTCCCTAGCTGG...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAACCAGCTAGGGACACATaGGACAACAAACCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKPARDT*DNKPLH
Trigger: GTGAAGAGGTTTGTTGTCTCATGTGTCCCTAGCTGG...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp AATTTGGCAAGTATGACAAATGTACAGATGGTTGACAGCTGGTCCTCCACCATAATGATGGCAAATGACTaGCAGAAGATCATATGTCAC +
Preference number: 4 (lower is better)
Translates to: NLASMTNVQMVDSWSSTIMMAND*QKIICH
Trigger: GTGACATATGATCTTCTGTCAGTCATTTGCCATCAT...TATGGTGGAGGACCAGCTGTCAACCATCTGTACATTTGTCATACTTGCCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527390.1
CDS-3UTR TCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCTTCCATGATGGCAAATaGCTGACAGAAGATCATATG +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGFHDGK*LTEDHM
Trigger: CATATGATCTTCTGTCAGTCATTTGCCATCATGGAA...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTACTACTTGCAGTTCCATaGTGGCAAATGACTGACAGA +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALLLAVP*WQMTDR
Trigger: TCTGTCAGTCATTTGCCATCATGGAACTGCAAGTAG...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAATTATCCCAAATGTTCTaGGGCAGCATCAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKLSQMF*GSIKTR
Trigger: CCTGGTTTTGATGCTGCCTCAGAACATTTGGGATAA...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACGGGCTTTTGGAGAACTaGAAGACTGGTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHGLLEN*KTGQSQ
Trigger: CTGACTCTGACCAGTCTTTCAGTTCTCCAAAAGCCC...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACCATTGCTTTAGCTGGTaGCAGCTGCCCCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHHCFSW*QLPQTK
Trigger: TTTGGTTTGGGGCAGCTGTCACCAGCTAAAGCAATG...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCCCTGAGAATGTATGGTaGTGTGATCTACTTGTGATT +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGPENVW*CDLLVI
Trigger: AATCACAAGTAGATCACAGCACCATACATTCTCAGG...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR GCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCCTGCTCTATCACTGTTaGTACAAGATTCACAAGACT +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGLLYHC*YKIHKT
Trigger: AGTCTTGTGAATCTTGTAGCAACAGTGATAGAGCAG...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR GCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAGCTCTGCTGTGTATTTaGACTTTGACAGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKALLCI*TLTVSW
Trigger: CCAGGAAACTGTCAAAGTGCAAATACACAGCAGAGC...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCATAGTGTCCACTACTTaGAGTTCCATGATGGCAAAT +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGIVSTT*SSMMAN
Trigger: ATTTGCCATCATGGAACTGCAAGTAGTGGACACTAT...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp AATTTGGCAAGTATGACAAATGTACAGATGGTTGACAGCTGGTCCTCCACCATAATAGTGTCCACTACTTaGAGTTCCATGATGGCAAAT +
Preference number: 4 (lower is better)
Translates to: NLASMTNVQMVDSWSSTIIVSTT*SSMMAN
Trigger: ATTTGCCATCATGGAACTGCAAGTAGTGGACACTAT...TATGGTGGAGGACCAGCTGTCAACCATCTGTACATTTGTCATACTTGCCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527390.1
CDS-3UTR GCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCTTTGTGCCTCTTCGCTaGTCTTCCTATAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGFVPLR*SSYRKE
Trigger: TTCTTTTCTATAGGAAGAGCAGCGAAGAGGCACAAA...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAACCAGAATCTGCTCCTTaGCTAAGCATCACATTACCA +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKPESAP*LSITLP
Trigger: TGGTAATGTGATGCTTAGGCAAGGAGCAGATTCTGG...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAAATTTGGCATGTTTTTaGAGTGGCTGGTACCGGTTG +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKNLACF*SGWYRL
Trigger: CAACCGGTACCAGCCACTGCAAAAACATGCCAAATT...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000370793.5
CDS-3UTR CCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACAGGCACAACAGATCCTaGCCTGCTTTTATGCCACAG +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHRHNRS*PAFMPQ
Trigger: CTGTGGCATAAAAGCAGGCCAGGATCTGTTGTGCCT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGGCACAACAGATCCTaGCCTGCTTTTATGCCACAG +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKRHNRS*PAFMPQ
Trigger: CTGTGGCATAAAAGCAGGCCAGGATCTGTTGTGCCT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTACCATTGTCTCCTCAGTaGTTATGGTTTGCGGATCTT +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALPLSPQ*LWFADL
Trigger: AAGATCCGCAAACCATAACCACTGAGGAGACAATGG...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAACCATTGTCTCCTCAGTaGTTATGGTTTGCGGATCTT +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKPLSPQ*LWFADL
Trigger: AAGATCCGCAAACCATAACCACTGAGGAGACAATGG...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCAAATCTACATCCGACTaGCTCTTGTCTTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGKSTSD*LLSSSI
Trigger: AATGGAAGAAGACAAGAGCCAGTCGGATGTAGATTT...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACAGCTATCCACCCTTGTaGAGCATATGCTTCGCCACA +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHSYPPL*SICFAT
Trigger: TGTGGCGAAGCATATGCTCCACAAGGGTGGATAGCT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp AATTTGGCAAGTATGACAAATGTACAGATGGTTGACAGCTGGTCCTCCACCATAAGCGGAAATGAAACATaGGTACTGATTTTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: NLASMTNVQMVDSWSSTISGNET*VLILVE
Trigger: TTCCACCAAAATCAGTACCCATGTTTCATTTCCGCT...TATGGTGGAGGACCAGCTGTCAACCATCTGTACATTTGTCATACTTGCCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527390.1
CDS-3UTR CCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCTGCTTGAAGTATATCTaGATCAACATGAACAACCGG +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGCLKYI*INMNNR
Trigger: CCGGTTGTTCATGTTGATCCAGATATACTTCAAGCA...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCTGTTATTTCACCAACTaGATCCAAATGTGGACAATG +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGCYFTN*IQMWTM
Trigger: CATTGTCCACATTTGGATTCAGTTGGTGAAATAACA...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR TCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAACCACAGCCAACATATaGACATCTATTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKTTANI*TSILQT
Trigger: TGTCTGGAGAATAGATGTTCATATGTTGGCTGTGGT...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR TCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTACAAGATTCACAAGACTaGAAATCTACATCCGACTGG +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALQDSQD*KSTSDW
Trigger: CCAGTCGGATGTAGATTTTCAGTCTTGTGAATCTTG...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR TCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTATCGAATGGACATCAGTaGTATATTCTGAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALSNGHQ*YILKLC
Trigger: GCAGAGCTTCAGAATATATCACTGATGTCCATTCGA...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAAGTCAGACACTGCACTaGACTAATGATTGTTCCATC +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKSQTLH*TNDCSI
Trigger: GATGGAACAATCATTAGTTCAGTGCAGTGTCTGACT...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAATATGCTTCGCCACATaGTCCTGCTTTGACTATAGA +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKICFAT*SCFDYR
Trigger: TCTATAGTCAAAGCAGGATCATGTGGCGAAGCATAT...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAATGGTCAGAGTCAGGGTaGTTTAGGACAATGAAAAAG +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKWSESG*FRTMKK
Trigger: CTTTTTCATTGTCCTAAATCACCCTGACTCTGACCA...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTATGGTCAGAGTCAGGGTaGTTTAGGACAATGAAAAAG +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALWSESG*FRTMKK
Trigger: CTTTTTCATTGTCCTAAATCACCCTGACTCTGACCA...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAGCGGCAATAAGTTACTaGTATCTGCTGACAAATTCC +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALAAISY*YLLTNS
Trigger: GGAATTTGTCAGCAGATATCAGTAACTTATTGCCGC...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAGCGGCAATAAGTTACTaGTATCTGCTGACAAATTCC +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKAAISY*YLLTNS
Trigger: GGAATTTGTCAGCAGATATCAGTAACTTATTGCCGC...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCAAAACAAAGCCATCATaGATGCTATTCAACATCCTC +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGKTKPS*MLFNIL
Trigger: GAGGATGTTGAATAGCATTCATGATGGCTTTGTTTT...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTATCTATTCTCCAGACATaGCCAAAGATTTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALSILQT*PKIWSL
Trigger: CAAGGACCAAATCTTTGGGCATGTCTGGAGAATAGA...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR GCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCAAGAGCCTGCAAAGCTaGATTCATGTAACAAGTATT +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGKSLQS*IHVTSI
Trigger: AATACTTGTTACATGAATGCAGCTTTGCAGGCTCTT...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR GCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACCCTGGCCTGCTTTTATaGCACAGCTCTGTCATTAGT +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHPGLLL*HSSVIS
Trigger: ACTAATGACAGAGCTGTGGCATAAAAGCAGGCCAGG...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR GCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAATCAGTGGTTATGGTTTaGGGATCTTCTTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKSVVMV*GSSSTS
Trigger: GGAAGTAGAAGAAGATCCGCAAACCATAACCACTGA...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR GCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCTCACAAGTCAGACACTaGACTGAACTAATGATTGTT +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGSQVRH*TELMIV
Trigger: AACAATCATTAGTTCAGTGCAGTGTCTGACTTGTGA...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAGCAGCAAGACAATCTTaGAAGGTTACTACTGGACCC +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKAARQS*KVTTGP
Trigger: GGGTCCAGTAGTAACCTTGCAAGATTGTCTTGCTGC...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACGCAGCAAGACAATCTTaGAAGGTTACTACTGGACCC +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHAARQS*KVTTGP
Trigger: GGGTCCAGTAGTAACCTTGCAAGATTGTCTTGCTGC...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAGTCCTCCACCATACCTaGTATATAGGTTATCCCAAA +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALVLHHT*YIGYPK
Trigger: TTTGGGATAACCTATATAGCAGGTATGGTGGAGGAC...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAGTCCTCCACCATACCTaGTATATAGGTTATCCCAAA +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKVLHHT*YIGYPK
Trigger: TTTGGGATAACCTATATAGCAGGTATGGTGGAGGAC...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAATTAGCTGGTGACAGCTaGCCCAAACCAAAACAAAGC +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKLAGDS*PKPKQS
Trigger: GCTTTGTTTTGGTTTGGGGCAGCTGTCACCAGCTAA...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAATCTCCTGAGAATGTATaGTGCTGTGATCTACTTGTG +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKSPENV*CCDLLV
Trigger: CACAAGTAGATCACAGCACCATACATTCTCAGGAGA...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTATCTCCTGAGAATGTATaGTGCTGTGATCTACTTGTG +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALSPENV*CCDLLV
Trigger: CACAAGTAGATCACAGCACCATACATTCTCAGGAGA...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTATCTCCTCAGTGGTTATaGTTTGCGGATCTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALSPQWL*FADLLL
Trigger: TAGAAGAAGATCCGCAAACCATAACCACTGAGGAGA...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCGACAGGTCATTCGAATaGACATCAGTGATATATTCT +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGDRSFE*TSVIYS
Trigger: AGAATATATCACTGATGTCCATTCGAATGACCTGTC...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAATTGCAAGGTTACTACTaGACCCCAAAACCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKLQGYY*TPKPAR
Trigger: CCTAGCTGGTTTTGGGGTCCAGTAGTAACCTTGCAA...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAATCCTTAGCAAGAAATaGCTGAAGATCCAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALILSKK*LKIQAF
Trigger: GAAGGCTTGGATCTTCAGCCATTTCTTGCTAAGGAT...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCTGTCACAATTTGAGCTaGACTATCCTTAGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGCHNLS*TILSKK
Trigger: TTTCTTGCTAAGGATAGTCCAGCTCAAATTGTGACA...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAGGAGAGTCCTCTTTTTaGAACGCTCTGTTAAGCCGA +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKGESSF*NALLSR
Trigger: TCGGCTTAACAGAGCGTTCCAAAAAGAGGACTCTCC...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAATTGTCAATAGGACCTaGAGGATCTCCATCTTTACC +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKIVNRT*RISIFT
Trigger: GGTAAAGATGGAGATCCTCCAGGTCCTATTGACAAT...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp TTTCTTCTGCTTGAAGTATATCTGGATCAACATGAACAACCGGAGGTCGCAGGAATTGTCAATAGGACCTaGAGGATCCGAATAAAAATT +
Preference number: 4 (lower is better)
Translates to: FLLLEVYLDQHEQPEVAGIVNRT*RIRIKI
Trigger: AATTTTTATTCGGATCCTCCAGGTCCTATTGACAAT...TCCTGCGACCTCCGGTTGTTCATGTTGATCCAGATATACTTCAAGCAGAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481579.5
CDS-3UTR TCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACGCTGTGATCTACTTGTaGTTCACCACAGCCAACATA +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHAVIYL*FTTANI
Trigger: TATGTTGGCTGTGGTGAATCACAAGTAGATCACAGC...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR TCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAATTAACACCTTCATTTaGTGGAAGGATCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALINTFI*WKDLWC
Trigger: ACACCACAGATCCTTCCATCAAATGAAGGTGTTAAT...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAATTCCATGATGGCAAATaGCTGACAGAAGATCATATG +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKFHDGK*LTEDHM
Trigger: CATATGATCTTCTGTCAGTCATTTGCCATCATGGAA...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAACTACTTGCAGTTCCATaGTGGCAAATGACTGACAGA +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKLLAVP*WQMTDR
Trigger: TCTGTCAGTCATTTGCCATCATGGAACTGCAAGTAG...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAACTTCAGTGACACTCTaGTCATCAAATTCATACCAG +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALTSVTL*SSNSYQ
Trigger: CTGGTATGAATTTGATGATCAGAGTGTCACTGAAGT...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAATTATCCCAAATGTTCTaGGGCAGCATCAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKLSQMF*GSIKTR
Trigger: CCTGGTTTTGATGCTGCCTCAGAACATTTGGGATAA...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACTTATCCCAAATGTTCTaGGGCAGCATCAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHLSQMF*GSIKTR
Trigger: CCTGGTTTTGATGCTGCCTCAGAACATTTGGGATAA...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTACCTGAGAATGTATGGTaGTGTGATCTACTTGTGATT +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALPENVW*CDLLVI
Trigger: AATCACAAGTAGATCACAGCACCATACATTCTCAGG...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR GCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCCCAAAAATACTTCTTTaGTGCAAGCATAACACCATA +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGPKILL*CKHNTI
Trigger: TATGGTGTTATGCTTGCAGCAAAGAAGTATTTTTGG...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR GCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAACTGCTCTATCACTGTTaGTACAAGATTCACAAGACT +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKLLYHC*YKIHKT
Trigger: AGTCTTGTGAATCTTGTAGCAACAGTGATAGAGCAG...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR GCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAATAGTGTCCACTACTTaGAGTTCCATGATGGCAAAT +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALIVSTT*SSMMAN
Trigger: ATTTGCCATCATGGAACTGCAAGTAGTGGACACTAT...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCAAGAACGTAAGCTTCTaGATTTTGTACAGTAGATTC +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGKNVSF*ILYSRF
Trigger: GAATCTACTGTACAAAATGCAGAAGCTTACGTTCTT...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAATTTGTGCCTCTTCGCTaGTCTTCCTATAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKFVPLR*SSYRKE
Trigger: TTCTTTTCTATAGGAAGAGCAGCGAAGAGGCACAAA...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAACCAGAATCTGCTCCTTaGCTAAGCATCACATTACCA +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKPESAP*LSITLP
Trigger: TGGTAATGTGATGCTTAGGCAAGGAGCAGATTCTGG...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACCCAGAATCTGCTCCTTaGCTAAGCATCACATTACCA +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHPESAP*LSITLP
Trigger: TGGTAATGTGATGCTTAGGCAAGGAGCAGATTCTGG...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCACATTCCACACTTCATaGTCTCAAAATAAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGTFHTS*SQNKKC
Trigger: GCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGT...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAACCATTGTCTCCTCAGTaGTTATGGTTTGCGGATCTT +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKPLSPQ*LWFADL
Trigger: AAGATCCGCAAACCATAACCACTGAGGAGACAATGG...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAAAATCTACATCCGACTaGCTCTTGTCTTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKKSTSD*LLSSSI
Trigger: AATGGAAGAAGACAAGAGCCAGTCGGATGTAGATTT...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAAAATCTACATCCGACTaGCTCTTGTCTTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALKSTSD*LLSSSI
Trigger: AATGGAAGAAGACAAGAGCCAGTCGGATGTAGATTT...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAAGCGGAAATGAAACATaGGTACTGATTTTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALSGNET*VLILVE
Trigger: TTCCACCAAAATCAGTACCCATGTTTCATTTCCGCT...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAATAACCAGCTTTTCTTaGAGGAACACCTCCATGAAT +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKITSFS*RNTSMN
Trigger: ATTCATGGAGGTGTTCCTCCAAGAAAAGCTGGTTAT...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAATGCTTGAAGTATATCTaGATCAACATGAACAACCGG +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKCLKYI*INMNNR
Trigger: CCGGTTGTTCATGTTGATCCAGATATACTTCAAGCA...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAACCAAGACTTTCAAAATaGGGTAACACCTTTAAGGTT +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKPRLSK*GNTFKV
Trigger: AACCTTAAAGGTGTTACCTCATTTTGAAAGTCTTGG...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357428.5
ENST00000370793.5
CDS-3UTR TCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTACCAAGACTTTCAAAATaGGGTAACACCTTTAAGGTT +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALPRLSK*GNTFKV
Trigger: AACCTTAAAGGTGTTACCTCATTTTGAAAGTCTTGG...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357428.5
ENST00000370793.5
CDS-3UTR TCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAATCCAAATGTGGACAATaGTTTCGAAAAGCTGACATT +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKSKCGQ*FRKADI
Trigger: AATGTCAGCTTTTCGAAATCATTGTCCACATTTGGA...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR TCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTATCCAAATGTGGACAATaGTTTCGAAAAGCTGACATT +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALSKCGQ*FRKADI
Trigger: AATGTCAGCTTTTCGAAATCATTGTCCACATTTGGA...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR TCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAACCACAGCCAACATATaGACATCTATTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKTTANI*TSILQT
Trigger: TGTCTGGAGAATAGATGTTCATATGTTGGCTGTGGT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR TCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAACAAGATTCACAAGACTaGAAATCTACATCCGACTGG +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKQDSQD*KSTSDW
Trigger: CCAGTCGGATGTAGATTTTCAGTCTTGTGAATCTTG...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR TCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAATCAGTGATATATTCTaGAGCTCTGCTGTGTATTTG +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKISDIF*SSAVYL
Trigger: CAAATACACAGCAGAGCTTCAGAATATATCACTGAT...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAATCAGTGATATATTCTaGAGCTCTGCTGTGTATTTG +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALISDIF*SSAVYL
Trigger: CAAATACACAGCAGAGCTTCAGAATATATCACTGAT...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACTCGAATGGACATCAGTaGTATATTCTGAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHSNGHQ*YILKLC
Trigger: GCAGAGCTTCAGAATATATCACTGATGTCCATTCGA...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAATCGAATGGACATCAGTaGTATATTCTGAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKSNGHQ*YILKLC
Trigger: GCAGAGCTTCAGAATATATCACTGATGTCCATTCGA...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTCAGACACTGCACTaGACTAATGATTGTTCCATC +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKSQTLH*TNDCSI
Trigger: GATGGAACAATCATTAGTTCAGTGCAGTGTCTGACT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACATATGCTTCGCCACATaGTCCTGCTTTGACTATAGA +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHICFAT*SCFDYR
Trigger: TCTATAGTCAAAGCAGGATCATGTGGCGAAGCATAT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACGCGGCAATAAGTTACTaGTATCTGCTGACAAATTCC +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHAAISY*YLLTNS
Trigger: GGAATTTGTCAGCAGATATCAGTAACTTATTGCCGC...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACTCTATTCTCCAGACATaGCCAAAGATTTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHSILQT*PKIWSL
Trigger: CAAGGACCAAATCTTTGGGCATGTCTGGAGAATAGA...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR GCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAATCAGTGGTTATGGTTTaGGGATCTTCTTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKSVVMV*GSSSTS
Trigger: GGAAGTAGAAGAAGATCCGCAAACCATAACCACTGA...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR GCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTATCACAAGTCAGACACTaGACTGAACTAATGATTGTT +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALSQVRH*TELMIV
Trigger: AACAATCATTAGTTCAGTGCAGTGTCTGACTTGTGA...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAATCACAAGTCAGACACTaGACTGAACTAATGATTGTT +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKSQVRH*TELMIV
Trigger: AACAATCATTAGTTCAGTGCAGTGTCTGACTTGTGA...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAACAAAGCCATCATGAATaGTATTCAACATCCTCAATG +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKQSHHE*YSTSSM
Trigger: CATTGAGGATGTTGAATAGCATTCATGATGGCTTTG...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTACAAAGCCATCATGAATaGTATTCAACATCCTCAATG +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALQSHHE*YSTSSM
Trigger: CATTGAGGATGTTGAATAGCATTCATGATGGCTTTG...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAGTTAGCTGGTTATTTTaGTCATTAGTTGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALVSWLF*SLVEAV
Trigger: AACTGCCTCAACTAATGAGCAAAATAACCAGCTAAC...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370793.5
CDS-3UTR CCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACTCTCCTGAGAATGTATaGTGCTGTGATCTACTTGTG +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHSPENV*CCDLLV
Trigger: CACAAGTAGATCACAGCACCATACATTCTCAGGAGA...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAAACTGTGTCAAAGGTaGGCAATTAGAAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKKLCQR*AIRKSL
Trigger: CAGGCTCTTTCTAATTGCCCACCTTTGACACAGTTT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACTCTCCTCAGTGGTTATaGTTTGCGGATCTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHSPQWL*FADLLL
Trigger: TAGAAGAAGATCCGCAAACCATAACCACTGAGGAGA...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAATCTCCTCAGTGGTTATaGTTTGCGGATCTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKSPQWL*FADLLL
Trigger: TAGAAGAAGATCCGCAAACCATAACCACTGAGGAGA...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAACTTTGACAGTTTCCTaGTTGTTTAAGTCGACTGTT +
Preference number: 4 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKTLTVS*LFKSTV
Trigger: AACAGTCGACTTAAACAACCAGGAAACTGTCAAAGT...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAACTTTGACAGTTTCCTaGTTGTTTAAGTCGACTGTT +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALTLTVS*LFKSTV
Trigger: AACAGTCGACTTAAACAACCAGGAAACTGTCAAAGT...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAGACAGGTCATTCGAATaGACATCAGTGATATATTCT +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALDRSFE*TSVIYS
Trigger: AGAATATATCACTGATGTCCATTCGAATGACCTGTC...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAATCCTTAGCAAGAAATaGCTGAAGATCCAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKILSKK*LKIQAF
Trigger: GAAGGCTTGGATCTTCAGCCATTTCTTGCTAAGGAT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTATGTCACAATTTGAGCTaGACTATCCTTAGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALCHNLS*TILSKK
Trigger: TTTCTTGCTAAGGATAGTCCAGCTCAAATTGTGACA...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACATTGTCAATAGGACCTaGAGGATCTCCATCTTTACC +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHIVNRT*RISIFT
Trigger: GGTAAAGATGGAGATCCTCCAGGTCCTATTGACAAT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAAAATCAAGTTGCAAGTaGCCTCAGCTTTATCAACAA +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALKSSCK*PQLYQQ
Trigger: TTGTTGATAAAGCTGAGGCCACTTGCAACTTGATTT...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAATGGACTTTACAATCCTaGCAAGTACCAAGGGATTTT +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKWTLQS*QVPRDF
Trigger: AAAATCCCTTGGTACTTGTCAGGATTGTAAAGTCCA...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR TCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACTGGACTTTACAATCCTaGCAAGTACCAAGGGATTTT +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHWTLQS*QVPRDF
Trigger: AAAATCCCTTGGTACTTGTCAGGATTGTAAAGTCCA...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR TCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAATTAACACCTTCATTTaGTGGAAGGATCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKINTFI*WKDLWC
Trigger: ACACCACAGATCCTTCCATCAAATGAAGGTGTTAAT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACATTAACACCTTCATTTaGTGGAAGGATCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHINTFI*WKDLWC
Trigger: ACACCACAGATCCTTCCATCAAATGAAGGTGTTAAT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACATGATGGCAAATGACTaGCAGAAGATCATATGTCAC +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHMMAND*QKIICH
Trigger: GTGACATATGATCTTCTGTCAGTCATTTGCCATCAT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAATGATGGCAAATGACTaGCAGAAGATCATATGTCAC +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKMMAND*QKIICH
Trigger: GTGACATATGATCTTCTGTCAGTCATTTGCCATCAT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACTTCCATGATGGCAAATaGCTGACAGAAGATCATATG +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHFHDGK*LTEDHM
Trigger: CATATGATCTTCTGTCAGTCATTTGCCATCATGGAA...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACACTTCAGTGACACTCTaGTCATCAAATTCATACCAG +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHTSVTL*SSNSYQ
Trigger: CTGGTATGAATTTGATGATCAGAGTGTCACTGAAGT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAACTTCAGTGACACTCTaGTCATCAAATTCATACCAG +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKTSVTL*SSNSYQ
Trigger: CTGGTATGAATTTGATGATCAGAGTGTCACTGAAGT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACCCTGAGAATGTATGGTaGTGTGATCTACTTGTGATT +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHPENVW*CDLLVI
Trigger: AATCACAAGTAGATCACAGCACCATACATTCTCAGG...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR GCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACATAGTGTCCACTACTTaGAGTTCCATGATGGCAAAT +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHIVSTT*SSMMAN
Trigger: ATTTGCCATCATGGAACTGCAAGTAGTGGACACTAT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAAAGAACGTAAGCTTCTaGATTTTGTACAGTAGATTC +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALKNVSF*ILYSRF
Trigger: GAATCTACTGTACAAAATGCAGAAGCTTACGTTCTT...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACTTTGTGCCTCTTCGCTaGTCTTCCTATAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHFVPLR*SSYRKE
Trigger: TTCTTTTCTATAGGAAGAGCAGCGAAGAGGCACAAA...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAATTTGTGCCTCTTCGCTaGTCTTCCTATAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKFVPLR*SSYRKE
Trigger: TTCTTTTCTATAGGAAGAGCAGCGAAGAGGCACAAA...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAACATTCCACACTTCATaGTCTCAAAATAAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALTFHTS*SQNKKC
Trigger: GCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGT...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAATACCCCCGAAATGTTaGATTTACAGTTTTAATTCC +
Preference number: 4 (lower is better)
Translates to: TIVVTHSTLHALKIKSALIPPKC*IYSFNS
Trigger: GGAATTAAAACTGTAAATCCAACATTTCGGGGGTAT...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACAGCGGAAATGAAACATaGGTACTGATTTTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHSGNET*VLILVE
Trigger: TTCCACCAAAATCAGTACCCATGTTTCATTTCCGCT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAATAACCAGCTTTTCTTaGAGGAACACCTCCATGAAT +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKITSFS*RNTSMN
Trigger: ATTCATGGAGGTGTTCCTCCAAGAAAAGCTGGTTAT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAATCCAAATGTGGACAATaGTTTCGAAAAGCTGACATT +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKSKCGQ*FRKADI
Trigger: AATGTCAGCTTTTCGAAATCATTGTCCACATTTGGA...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR TCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAATCAGTGATATATTCTaGAGCTCTGCTGTGTATTTG +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKISDIF*SSAVYL
Trigger: CAAATACACAGCAGAGCTTCAGAATATATCACTGAT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACATCAGTGATATATTCTaGAGCTCTGCTGTGTATTTG +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHISDIF*SSAVYL
Trigger: CAAATACACAGCAGAGCTTCAGAATATATCACTGAT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAAAACAAAGCCATCATaGATGCTATTCAACATCCTC +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKKTKPS*MLFNIL
Trigger: GAGGATGTTGAATAGCATTCATGATGGCTTTGTTTT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
36% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR TCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACAAAACAAAGCCATCATaGATGCTATTCAACATCCTC +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHKTKPS*MLFNIL
Trigger: GAGGATGTTGAATAGCATTCATGATGGCTTTGTTTT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAAGAGCCTGCAAAGCTaGATTCATGTAACAAGTATT +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKKSLQS*IHVTSI
Trigger: AATACTTGTTACATGAATGCAGCTTTGCAGGCTCTT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR GCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAATCACAAGTCAGACACTaGACTGAACTAATGATTGTT +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKSQVRH*TELMIV
Trigger: AACAATCATTAGTTCAGTGCAGTGTCTGACTTGTGA...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAACAAAGCCATCATGAATaGTATTCAACATCCTCAATG +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKQSHHE*YSTSSM
Trigger: CATTGAGGATGTTGAATAGCATTCATGATGGCTTTG...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAACTTTGACAGTTTCCTaGTTGTTTAAGTCGACTGTT +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKTLTVS*LFKSTV
Trigger: AACAGTCGACTTAAACAACCAGGAAACTGTCAAAGT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACGACAGGTCATTCGAATaGACATCAGTGATATATTCT +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHDRSFE*TSVIYS
Trigger: AGAATATATCACTGATGTCCATTCGAATGACCTGTC...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACCTGAATCTTTTAAGGTaGATGCACAAAATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHLNLLR*MHKISG
Trigger: TCCTGAGATTTTGTGCATCCACCTTAAAAGATTCAG...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAACTGAATCTTTTAAGGTaGATGCACAAAATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKLNLLR*MHKISG
Trigger: TCCTGAGATTTTGTGCATCCACCTTAAAAGATTCAG...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACTGTCACAATTTGAGCTaGACTATCCTTAGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHCHNLS*TILSKK
Trigger: TTTCTTGCTAAGGATAGTCCAGCTCAAATTGTGACA...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACAAATCAAGTTGCAAGTaGCCTCAGCTTTATCAACAA +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHKSSCK*PQLYQQ
Trigger: TTGTTGATAAAGCTGAGGCCACTTGCAACTTGATTT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAACCAAAAATACTTCTTTaGTGCAAGCATAACACCATA +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKPKILL*CKHNTI
Trigger: TATGGTGTTATGCTTGCAGCAAAGAAGTATTTTTGG...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR GCA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACAAGAACGTAAGCTTCTaGATTTTGTACAGTAGATTC +
Preference number: 4 (lower is better)
Translates to: TLYNISGNKLLISADKFHKNVSF*ILYSRF
Trigger: GAATCTACTGTACAAAATGCAGAAGCTTACGTTCTT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR GCA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAACATTCCACACTTCATaGTCTCAAAATAAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKTFHTS*SQNKKC
Trigger: GCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS TCA 90 bp AAGAAGGAATCCTCCGTAACTCATTTTATGAAGCCAGCATCATCCTaGCACCAAAGCCTCCACGGCCTGGCCCGCGGGACCCGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: KKESSVTHFMKPASS*HQSLHGLARGTRQL
Trigger: GAGCTGGCGGGTCCCGCGGGCCAGGCCGTGGAGGCTTTGGTGTCAGGATGATGCTGGCTTCATAAAATGAGTTACGGAGGATTCCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524536.5
CDS-3UTR CAA 90 bp TTGGCAAGTATGACAAATGTACAGATGGTTGACAGCTGGTCCTCCACCATACCTCAAATGTACAGATGGTaGACAGCTGGTCCTCCACCA +
Preference number: 5 (lower is better)
Translates to: LASMTNVQMVDSWSSTIPQMYRW*TAGPPP
Trigger: TGGTGGAGGACCAGCTGTCAACCATCTGTACATTTG...AGGTATGGTGGAGGACCAGCTGTCAACCATCTGTACATTTGTCATACTTGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527390.1
CDS CCA 90 bp CCTAACATCGATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTaGTACCGGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: PNIDGLYNLACFCSG*YRLFLSMFSASFRS
Trigger: GCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATCGATGTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370792.7
ENST00000370793.5
ENST00000524536.5
ENST00000530709.5
CDS-3UTR CAA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCTGGCAAGGACAGATCTaGAAAGGTCTCGAGGGTTAC +
Preference number: 5 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGWQGQI*KGLEGY
Trigger: GTAACCCTCGAGACCTTTCAAGATCTGTCCTTGCCA...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp TTTCTTCTGCTTGAAGTATATCTGGATCAACATGAACAACCGGAGGTCGCAGGACTTCCTTGCCAGGAATaGGCAAGGACAGATCTTGAA +
Preference number: 5 (lower is better)
Translates to: FLLLEVYLDQHEQPEVAGLPCQE*ARTDLE
Trigger: TTCAAGATCTGTCCTTGCCAATTCCTGGCAAGGAAG...TCCTGCGACCTCCGGTTGTTCATGTTGATCCAGATATACTTCAAGCAGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481579.5
CDS-3UTR CAA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCGGCAGCAAGACAATCTaGCAAGGTTACTACTGGACC +
Preference number: 5 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGGSKTI*QGYYWT
Trigger: GGTCCAGTAGTAACCTTGCAAGATTGTCTTGCTGCC...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCCAAATGTACAGATGGTaGACAGCTGGTCCTCCACCA +
Preference number: 5 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGQMYRW*TAGPPP
Trigger: TGGTGGAGGACCAGCTGTCAACCATCTGTACATTTG...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCTGGAGAGTCCTCTTTTaGGAACGCTCTGTTAAGCCG +
Preference number: 5 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGWRVLF*ERSVKP
Trigger: CGGCTTAACAGAGCGTTCCAAAAAGAGGACTCTCCA...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCAATCCTGGCCACAAATaGCCTGATTTAGGAGGGCTT +
Preference number: 5 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGNPGHK*PDLGGL
Trigger: AAGCCCTCCTAAATCAGGCAATTTGTGGCCAGGATT...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp TTGGCAAGTATGACAAATGTACAGATGGTTGACAGCTGGTCCTCCACCATACCTTATAGTGTCCACTACTaGCAGTTCCATGATGGCAAA +
Preference number: 5 (lower is better)
Translates to: LASMTNVQMVDSWSSTIPYSVHY*QFHDGK
Trigger: TTTGCCATCATGGAACTGCAAGTAGTGGACACTATA...AGGTATGGTGGAGGACCAGCTGTCAACCATCTGTACATTTGTCATACTTGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527390.1
CDS-3UTR CAA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAACATCCGACTGGCTCTaGTCTTCTTCCATTGTCTCC +
Preference number: 5 (lower is better)
Translates to: TIVVTHSTLHALKIKSALTSDWL*SSSIVS
Trigger: GGAGACAATGGAAGAAGACAAGAGCCAGTCGGATGT...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTATGGCAAGGACAGATCTaGAAAGGTCTCGAGGGTTAC +
Preference number: 5 (lower is better)
Translates to: TIVVTHSTLHALKIKSALWQGQI*KGLEGY
Trigger: GTAACCCTCGAGACCTTTCAAGATCTGTCCTTGCCA...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAATTAGCAAGGTCTTCCTaGCCAGGAATTGGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKLARSS*PGIGKD
Trigger: GTCCTTGCCAATTCCTGGCAAGGAAGACCTTGCTAA...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAGGCAGCAAGACAATCTaGCAAGGTTACTACTGGACC +
Preference number: 5 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKGSKTI*QGYYWT
Trigger: GGTCCAGTAGTAACCTTGCAAGATTGTCTTGCTGCC...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp CGCCTCAATTTGGCAAGTATGACAAATGTACAGATGGTTGACAGCTGGTCCTCCACATGGGTACTGATTTaGGTGGAAAACATTAGTTCA +
Preference number: 5 (lower is better)
Translates to: RLNLASMTNVQMVDSWSSTWVLI*VENISS
Trigger: TGAACTAATGTTTTCCACCAAAATCAGTACCCATGT...GGAGGACCAGCTGTCAACCATCTGTACATTTGTCATACTTGCCAAATTGAGGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527390.1
CDS-3UTR CAA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAACAAATGTACAGATGGTaGACAGCTGGTCCTCCACCA +
Preference number: 5 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKQMYRW*TAGPPP
Trigger: TGGTGGAGGACCAGCTGTCAACCATCTGTACATTTG...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTATGGAGAGTCCTCTTTTaGGAACGCTCTGTTAAGCCG +
Preference number: 5 (lower is better)
Translates to: TIVVTHSTLHALKIKSALWRVLF*ERSVKP
Trigger: CGGCTTAACAGAGCGTTCCAAAAAGAGGACTCTCCA...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAGCCAGAATCTGCTCCTaGCCTAAGCATCACATTACC +
Preference number: 5 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKARICS*PKHHIT
Trigger: GGTAATGTGATGCTTAGGCAAGGAGCAGATTCTGGC...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAGCCAGAATCTGCTCCTaGCCTAAGCATCACATTACC +
Preference number: 5 (lower is better)
Translates to: TIVVTHSTLHALKIKSALARICS*PKHHIT
Trigger: GGTAATGTGATGCTTAGGCAAGGAGCAGATTCTGGC...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS TCA 90 bp GGCTATATAGTGTCCACTACTTGCAGTTCCATGATGGCAAATGACTaGCAGAAGATCATATGTCACAATTTGAGCTGGACTATCCTTAGC +
Preference number: 5 (lower is better)
Translates to: GYIVSTTCSSMMAND*QKIICHNLSWTILS
Trigger: GCTAAGGATAGTCCAGCTCAAATTGTGACATATGATCTTCTGTCAGTCATTTGCCATCATGGAACTGCAAGTAGTGGACACTATATAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357428.5
ENST00000370792.7
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
ENST00000527390.1
CDS-3UTR CAA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCTATAGTGTCCACTACTaGCAGTTCCATGATGGCAAA +
Preference number: 5 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGYSVHY*QFHDGK
Trigger: TTTGCCATCATGGAACTGCAAGTAGTGGACACTATA...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp AGTATGACAAATGTACAGATGGTTGACAGCTGGTCCTCCACCATACCTGCTATATTTCTCCGCCTCAATTaGGCAAGTATGACAAATGTA +
Preference number: 5 (lower is better)
Translates to: SMTNVQMVDSWSSTIPAIFLRLN*ASMTNV
Trigger: TACATTTGTCATACTTGCCAAATTGAGGCGGAGAAA...TATAGCAGGTATGGTGGAGGACCAGCTGTCAACCATCTGTACATTTGTCATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527390.1
CDS TCA 90 bp CAACAGATCCTGGCCTGCTTTTATGCCACAGCTCTGTCATTAGTTTaGGATAACTTTTACAAATGGCAGGTTTCTTATCTGTTCGAGCTA +
Preference number: 5 (lower is better)
Translates to: QQILACFYATALSLV*DNFYKWQVSYLFEL
Trigger: TAGCTCGAACAGATAAGAAACCTGCCATTTGTAAAAGTTATCTCAAACTAATGACAGAGCTGTGGCATAAAAGCAGGCCAGGATCTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370792.7
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCCAGTTAGATAATGCTTaGTCTCCTGAGAATGTATGG +
Preference number: 5 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGQLDNA*SPENVW
Trigger: CCATACATTCTCAGGAGACAAAGCATTATCTAACTG...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTACTCAGTGGTTATGGTTaGCGGATCTTCTTCTACTTC +
Preference number: 5 (lower is better)
Translates to: TIVVTHSTLHALKIKSALLSGYG*RIFFYF
Trigger: GAAGTAGAAGAAGATCCGCAAACCATAACCACTGAG...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTATCTTGTCTTCTTCCATaGTCTCCTCAGTGGTTATGG +
Preference number: 5 (lower is better)
Translates to: TIVVTHSTLHALKIKSALSCLLP*SPQWLW
Trigger: CCATAACCACTGAGGAGACAATGGAAGAAGACAAGA...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAATCTTGTCTTCTTCCATaGTCTCCTCAGTGGTTATGG +
Preference number: 5 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKSCLLP*SPQWLW
Trigger: CCATAACCACTGAGGAGACAATGGAAGAAGACAAGA...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACACATCCGACTGGCTCTaGTCTTCTTCCATTGTCTCC +
Preference number: 5 (lower is better)
Translates to: TLYNISGNKLLISADKFHTSDWL*SSSIVS
Trigger: GGAGACAATGGAAGAAGACAAGAGCCAGTCGGATGT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAACATCCGACTGGCTCTaGTCTTCTTCCATTGTCTCC +
Preference number: 5 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKTSDWL*SSSIVS
Trigger: GGAGACAATGGAAGAAGACAAGAGCCAGTCGGATGT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCCTGTGTATTTGCACTTaGACAGTTTCCTGGTTGTTT +
Preference number: 5 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGLCICT*TVSWLF
Trigger: AAACAACCAGGAAACTGTCAAAGTGCAAATACACAG...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAATGGCAAGGACAGATCTaGAAAGGTCTCGAGGGTTAC +
Preference number: 5 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKWQGQI*KGLEGY
Trigger: GTAACCCTCGAGACCTTTCAAGATCTGTCCTTGCCA...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACTTAGCAAGGTCTTCCTaGCCAGGAATTGGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: TLYNISGNKLLISADKFHLARSS*PGIGKD
Trigger: GTCCTTGCCAATTCCTGGCAAGGAAGACCTTGCTAA...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAGGCAGCAAGACAATCTaGCAAGGTTACTACTGGACC +
Preference number: 5 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKGSKTI*QGYYWT
Trigger: GGTCCAGTAGTAACCTTGCAAGATTGTCTTGCTGCC...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAACAAATGTACAGATGGTaGACAGCTGGTCCTCCACCA +
Preference number: 5 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKQMYRW*TAGPPP
Trigger: TGGTGGAGGACCAGCTGTCAACCATCTGTACATTTG...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCTTTCTCCGCCTCAATTaGGCAAGTATGACAAATGTA +
Preference number: 5 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGFLRLN*ASMTNV
Trigger: TACATTTGTCATACTTGCCAAATTGAGGCGGAGAAA...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAGCCAGAATCTGCTCCTaGCCTAAGCATCACATTACC +
Preference number: 5 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKARICS*PKHHIT
Trigger: GGTAATGTGATGCTTAGGCAAGGAGCAGATTCTGGC...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS TCA 90 bp TTTTCATTTTCTGCTCTATCACTGTTGCTACAAGATTCACAAGACTaGAAATCTACATCCGACTGGCTCTTGTCTTCTTCCATTGTCTCC +
Preference number: 5 (lower is better)
Translates to: FSFSALSLLLQDSQD*KSTSDWLLSSSIVS
Trigger: GGAGACAATGGAAGAAGACAAGAGCCAGTCGGATGTAGATTTTCAGTCTTGTGAATCTTGTAGCAACAGTGATAGAGCAGAAAATGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370792.7
ENST00000370793.5
ENST00000370794.7
CDS TCA 90 bp CCGAATTCTACCAGAGGTACAAAGAGGAGCTGGTACCATTCCTTCTaGAACTATTCCAATCAATATAAAAAGAAGGAATCCTCCGTAACT +
Preference number: 5 (lower is better)
Translates to: PNSTRGTKRSWYHSF*NYSNQYKKKESSVT
Trigger: AGTTACGGAGGATTCCTTCTTTTTATATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGCTCCTCTTTGTACCTCTGGTAGAATTCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524536.5
CDS GCA 90 bp AGAATCTGCTCCTTGCCTAAGCATCACATTACCACATTTAGTGACTaGAATCTTAGTATTGTCAATAGGACCTGGAGGATCCGAATAAAA +
Preference number: 5 (lower is better)
Translates to: RICSLPKHHITTFSD*NLSIVNRTWRIRIK
Trigger: TTTTATTCGGATCCTCCAGGTCCTATTGACAATACTAAGATTGCAGTCACTAAATGTGGTAATGTGATGCTTAGGCAAGGAGCAGATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481579.5
CDS-3UTR CAA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAACCAAAGATTTGGTCCTaGGACTTTACAATCCTGACA +
Preference number: 5 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKPKIWS*DFTILT
Trigger: TGTCAGGATTGTAAAGTCCAAGGACCAAATCTTTGG...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAACATCGAAGGAATTCTaGAGCATCCTGCTGAGAATA +
Preference number: 5 (lower is better)
Translates to: TIVVTHSTLHALKIKSALTSKEF*SILLRI
Trigger: TATTCTCAGCAGGATGCTCAAGAATTCCTTCGATGT...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAACATCGAAGGAATTCTaGAGCATCCTGCTGAGAATA +
Preference number: 5 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKTSKEF*SILLRI
Trigger: TATTCTCAGCAGGATGCTCAAGAATTCCTTCGATGT...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCTTCTACTTCCATGACTaGCTCTTTCAATTCTTCATG +
Preference number: 5 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGFYFHD*LFQFFM
Trigger: CATGAAGAATTGAAAGAGCAAGTCATGGAAGTAGAA...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTATCTGCTCTATCACTGTaGCTACAAGATTCACAAGAC +
Preference number: 5 (lower is better)
Translates to: TIVVTHSTLHALKIKSALSALSL*LQDSQD
Trigger: GTCTTGTGAATCTTGTAGCAACAGTGATAGAGCAGA...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAATCCTGGCCACAAATaGCCTGATTTAGGAGGGCTT +
Preference number: 5 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKNPGHK*PDLGGL
Trigger: AAGCCCTCCTAAATCAGGCAATTTGTGGCCAGGATT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACAATCCTGGCCACAAATaGCCTGATTTAGGAGGGCTT +
Preference number: 5 (lower is better)
Translates to: TLYNISGNKLLISADKFHNPGHK*PDLGGL
Trigger: AAGCCCTCCTAAATCAGGCAATTTGTGGCCAGGATT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAACTTCCTTGCCAGGAATaGGCAAGGACAGATCTTGAA +
Preference number: 5 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKLPCQE*ARTDLE
Trigger: TTCAAGATCTGTCCTTGCCAATTCCTGGCAAGGAAG...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACCTTCCTTGCCAGGAATaGGCAAGGACAGATCTTGAA +
Preference number: 5 (lower is better)
Translates to: TLYNISGNKLLISADKFHLPCQE*ARTDLE
Trigger: TTCAAGATCTGTCCTTGCCAATTCCTGGCAAGGAAG...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCACATGGGTACTGATTTaGGTGGAAAACATTAGTTCA +
Preference number: 5 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGTWVLI*VENISS
Trigger: TGAACTAATGTTTTCCACCAAAATCAGTACCCATGT...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp CTACTGATTTCACAATTGTCCCTCCTCTTTCAAAAATATTACACTGGGCCAGGCAAAACTGAAGGAGGCTaGGTTCCATTATGTTCAATA +
Preference number: 5 (lower is better)
Translates to: LLISQLSLLFQKYYTGPGKTEGG*VPLCSI
Trigger: TATTGAACATAATGGAACCAAGCCTCCTTCAGTTTT...GCCTGGCCCAGTGTAATATTTTTGAAAGAGGAGGGACAATTGTGAAATCAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTATATAACCAGCTTTTCTaGGAGGAACACCTCCATGAA +
Preference number: 5 (lower is better)
Translates to: TIVVTHSTLHALKIKSALYNQLF*EEHLHE
Trigger: TTCATGGAGGTGTTCCTCCAAGAAAAGCTGGTTATA...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAATATAACCAGCTTTTCTaGGAGGAACACCTCCATGAA +
Preference number: 5 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKYNQLF*EEHLHE
Trigger: TTCATGGAGGTGTTCCTCCAAGAAAAGCTGGTTATA...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAACTGCAATCTTAGTATaGTCAATAGGACCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKTAILV*SIGPGG
Trigger: TCCTCCAGGTCCTATTGACAATACTAAGATTGCAGT...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAACTGCAATCTTAGTATaGTCAATAGGACCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: TIVVTHSTLHALKIKSALTAILV*SIGPGG
Trigger: TCCTCCAGGTCCTATTGACAATACTAAGATTGCAGT...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACCAATTTGGCATGTTTTaGCAGTGGCTGGTACCGGTT +
Preference number: 5 (lower is better)
Translates to: TLYNISGNKLLISADKFHQFGMF*QWLVPV
Trigger: AACCGGTACCAGCCACTGCAAAAACATGCCAAATTG...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370793.5
CDS CCA 90 bp AACAGATCTGGCATTGGTTTCAAATTAACAGCAAATTGCTTATTATaGTCCTGTAATTATTTGATTTTGCCCCATGCTGACCTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: NRSGIGFKLTANCLL*SCNYLILPHADLPA
Trigger: TGCTGGGAGGTCAGCATGGGGCAAAATCAAATAATTACAGGACCATAATAAGCAATTTGCTGTTAATTTGAAACCAATGCCAGATCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462192.1
CDS-3UTR CAA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAACTCAGTGGTTATGGTTaGCGGATCTTCTTCTACTTC +
Preference number: 5 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKLSGYG*RIFFYF
Trigger: GAAGTAGAAGAAGATCCGCAAACCATAACCACTGAG...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACCTCAGTGGTTATGGTTaGCGGATCTTCTTCTACTTC +
Preference number: 5 (lower is better)
Translates to: TLYNISGNKLLISADKFHLSGYG*RIFFYF
Trigger: GAAGTAGAAGAAGATCCGCAAACCATAACCACTGAG...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACTCTTGTCTTCTTCCATaGTCTCCTCAGTGGTTATGG +
Preference number: 5 (lower is better)
Translates to: TLYNISGNKLLISADKFHSCLLP*SPQWLW
Trigger: CCATAACCACTGAGGAGACAATGGAAGAAGACAAGA...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTACTGTGTATTTGCACTTaGACAGTTTCCTGGTTGTTT +
Preference number: 5 (lower is better)
Translates to: TIVVTHSTLHALKIKSALLCICT*TVSWLF
Trigger: AAACAACCAGGAAACTGTCAAAGTGCAAATACACAG...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGCTCTGCTGTGTATTaGCACTTTGACAGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKSSAVY*HFDSFL
Trigger: CAGGAAACTGTCAAAGTGCAAATACACAGCAGAGCT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACAGCTCTGCTGTGTATTaGCACTTTGACAGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: TLYNISGNKLLISADKFHSSAVY*HFDSFL
Trigger: CAGGAAACTGTCAAAGTGCAAATACACAGCAGAGCT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAACCAAAGATTTGGTCCTaGGACTTTACAATCCTGACA +
Preference number: 5 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKPKIWS*DFTILT
Trigger: TGTCAGGATTGTAAAGTCCAAGGACCAAATCTTTGG...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACCCAAAGATTTGGTCCTaGGACTTTACAATCCTGACA +
Preference number: 5 (lower is better)
Translates to: TLYNISGNKLLISADKFHPKIWS*DFTILT
Trigger: TGTCAGGATTGTAAAGTCCAAGGACCAAATCTTTGG...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAGACATGCCCAAAGATTaGGTCCTTGGACTTTACAAT +
Preference number: 5 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKDMPKD*VLGLYN
Trigger: ATTGTAAAGTCCAAGGACCAAATCTTTGGGCATGTC...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACGACATGCCCAAAGATTaGGTCCTTGGACTTTACAAT +
Preference number: 5 (lower is better)
Translates to: TLYNISGNKLLISADKFHDMPKD*VLGLYN
Trigger: ATTGTAAAGTCCAAGGACCAAATCTTTGGGCATGTC...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAATACAGTTTTAATTCCTaGAAACAGAGTAGTAGGCAC +
Preference number: 5 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKYSFNS*KQSSRH
Trigger: GTGCCTACTACTCTGTTTCAAGGAATTAAAACTGTA...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTATTCTACTTCCATGACTaGCTCTTTCAATTCTTCATG +
Preference number: 5 (lower is better)
Translates to: TIVVTHSTLHALKIKSALFYFHD*LFQFFM
Trigger: CATGAAGAATTGAAAGAGCAAGTCATGGAAGTAGAA...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ATAAACACGCTTTTAGGAATGTTTTCGCATGTGTACATGTCAGGGCACATGAAAACATGGGTACTGATTTaGGTGGAAAACATTAGTTCA +
Preference number: 5 (lower is better)
Translates to: INTLLGMFSHVYMSGHMKTWVLI*VENISS
Trigger: TGAACTAATGTTTTCCACCAAAATCAGTACCCATGT...TTTCATGTGCCCTGACATGTACACATGCGAAAACATTCCTAAAAGCGTGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACTATAGTGTCCACTACTaGCAGTTCCATGATGGCAAA +
Preference number: 5 (lower is better)
Translates to: TLYNISGNKLLISADKFHYSVHY*QFHDGK
Trigger: TTTGCCATCATGGAACTGCAAGTAGTGGACACTATA...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAATATAGTGTCCACTACTaGCAGTTCCATGATGGCAAA +
Preference number: 5 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKYSVHY*QFHDGK
Trigger: TTTGCCATCATGGAACTGCAAGTAGTGGACACTATA...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp ACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAAGTGCCCTAAAAACTGAAGGAGGCTaGGTTCCATTATGTTCAATA +
Preference number: 5 (lower is better)
Translates to: TIVVTHSTLHALKIKSALKTEGG*VPLCSI
Trigger: TATTGAACATAATGGAACCAAGCCTCCTTCAGTTTT...TAGGGCACTTTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACTATAACCAGCTTTTCTaGGAGGAACACCTCCATGAA +
Preference number: 5 (lower is better)
Translates to: TLYNISGNKLLISADKFHYNQLF*EEHLHE
Trigger: TTCATGGAGGTGTTCCTCCAAGAAAAGCTGGTTATA...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAATATAACCAGCTTTTCTaGGAGGAACACCTCCATGAA +
Preference number: 5 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKYNQLF*EEHLHE
Trigger: TTCATGGAGGTGTTCCTCCAAGAAAAGCTGGTTATA...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACACTGCAATCTTAGTATaGTCAATAGGACCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: TLYNISGNKLLISADKFHTAILV*SIGPGG
Trigger: TCCTCCAGGTCCTATTGACAATACTAAGATTGCAGT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAACAGTTAGATAATGCTTaGTCTCCTGAGAATGTATGG +
Preference number: 5 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKQLDNA*SPENVW
Trigger: CCATACATTCTCAGGAGACAAAGCATTATCTAACTG...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAACTGTGTATTTGCACTTaGACAGTTTCCTGGTTGTTT +
Preference number: 5 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKLCICT*TVSWLF
Trigger: AAACAACCAGGAAACTGTCAAAGTGCAAATACACAG...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACTTTCTCCGCCTCAATTaGGCAAGTATGACAAATGTA +
Preference number: 5 (lower is better)
Translates to: TLYNISGNKLLISADKFHFLRLN*ASMTNV
Trigger: TACATTTGTCATACTTGCCAAATTGAGGCGGAGAAA...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAATTTCTCCGCCTCAATTaGGCAAGTATGACAAATGTA +
Preference number: 5 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKFLRLN*ASMTNV
Trigger: TACATTTGTCATACTTGCCAAATTGAGGCGGAGAAA...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS CCA 90 bp ATATATTCTGAAGCTCTGCTGTGTATTTGCACTTTGACAGTTTCCTaGTTGTTTAAGTCGACTGTTTCAGATATAGAGTCTCTATCTTTA +
Preference number: 5 (lower is better)
Translates to: IYSEALLCICTLTVS*LFKSTVSDIESLSL
Trigger: TAAAGATAGAGACTCTATATCTGAAACAGTCGACTTAAACAACCAGGAAACTGTCAAAGTGCAAATACACAGCAGAGCTTCAGAATATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370792.7
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAACTGTTTTCTTGTATTaGGTGAGGTTGTCTTACATG +
Preference number: 5 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKTVFLY*VRLSYM
Trigger: CATGTAAGACAACCTCACCAAATACAAGAAAACAGT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACACTGTTTTCTTGTATTaGGTGAGGTTGTCTTACATG +
Preference number: 5 (lower is better)
Translates to: TLYNISGNKLLISADKFHTVFLY*VRLSYM
Trigger: CATGTAAGACAACCTCACCAAATACAAGAAAACAGT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACTACAGTTTTAATTCCTaGAAACAGAGTAGTAGGCAC +
Preference number: 5 (lower is better)
Translates to: TLYNISGNKLLISADKFHYSFNS*KQSSRH
Trigger: GTGCCTACTACTCTGTTTCAAGGAATTAAAACTGTA...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAATTCTACTTCCATGACTaGCTCTTTCAATTCTTCATG +
Preference number: 5 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKFYFHD*LFQFFM
Trigger: CATGAAGAATTGAAAGAGCAAGTCATGGAAGTAGAA...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS-3UTR CAA 90 bp GCTTTATCAACAATCGTAGTGACACATTCCACACTTCATGCTCTCAAAATAAAAACATGGGTACTGATTTaGGTGGAAAACATTAGTTCA +
Preference number: 5 (lower is better)
Translates to: ALSTIVVTHSTLHALKIKTWVLI*VENISS
Trigger: TGAACTAATGTTTTCCACCAAAATCAGTACCCATGT...TTTTATTTTGAGAGCATGAAGTGTGGAATGTGTCACTACGATTGTTGATAAAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS-3UTR CAA 90 bp ACATTGTACAATATAAGCGGCAATAAGTTACTGATATCTGCTGACAAATTCCACAAAACTGAAGGAGGCTaGGTTCCATTATGTTCAATA +
Preference number: 5 (lower is better)
Translates to: TLYNISGNKLLISADKFHKTEGG*VPLCSI
Trigger: TATTGAACATAATGGAACCAAGCCTCCTTCAGTTTT...GTGGAATTTGTCAGCAGATATCAGTAACTTATTGCCGCTTATATTGTACAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS CCA 72 bp AGCCAGCATCATCCTGACACCAAAGCCTCCACGGCCTaGCCCGCGGGACCCGCCAGCTCGACCAACAACGGC +
Preference number: 6 (lower is better)
Translates to: SQHHPDTKASTA*PAGPASSTNNG
Trigger: GCCGTTGTTGGTCGAGCTGGCGGGTCCCGCGGGCCAGGCCGTGGAGGCTTTGGTGTCAGGATGATGCTGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524536.5
CDS TCA 72 bp TCCTCCGTAACTCATTTTATGAAGCCAGCATCATCCTaGCACCAAAGCCTCCACGGCCTGGCCCGCGGGACC +
Preference number: 6 (lower is better)
Translates to: SSVTHFMKPASS*HQSLHGLARGT
Trigger: GGTCCCGCGGGCCAGGCCGTGGAGGCTTTGGTGTCAGGATGATGCTGGCTTCATAAAATGAGTTACGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524536.5
CDS CAA 90 bp CAGCTTAGCAAGGTCTTCCTTGCCAGGAATTGGCAAGGACAGATCTaGAAAGGTCTCGAGGGTTACAGACACCCTGTCACAAGTCAGACA +
Preference number: 6 (lower is better)
Translates to: QLSKVFLARNWQGQI*KGLEGYRHPVTSQT
Trigger: TGTCTGACTTGTGACAGGGTGTCTGTAACCCTCGAGACCTTTCAAGATCTGTCCTTGCCAATTCCTGGCAAGGAAGACCTTGCTAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357428.5
ENST00000370792.7
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS CAA 90 bp GATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACCGGTaGTTCCTTTCCATGTTTAGTGCTTCCTTCAGGAGCTCTCCACGG +
Preference number: 6 (lower is better)
Translates to: DGLYNLACFCSGWYR*FLSMFSASFRSSPR
Trigger: CCGTGGAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370792.7
ENST00000370793.5
CDS CAA 90 bp CGACTGGCTCTTGTCTTCTTCCATTGTCTCCTCAGTGGTTATGGTTaGCGGATCTTCTTCTACTTCCATGACTTGCTCTTTCAATTCTTC +
Preference number: 6 (lower is better)
Translates to: RLALVFFHCLLSGYG*RIFFYFHDLLFQFF
Trigger: GAAGAATTGAAAGAGCAAGTCATGGAAGTAGAAGAAGATCCGCAAACCATAACCACTGAGGAGACAATGGAAGAAGACAAGAGCCAGTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370792.7
ENST00000370793.5
ENST00000370794.7
CDS CAA 90 bp CACAAGACTGAAAATCTACATCCGACTGGCTCTTGTCTTCTTCCATaGTCTCCTCAGTGGTTATGGTTTGCGGATCTTCTTCTACTTCCA +
Preference number: 6 (lower is better)
Translates to: HKTENLHPTGSCLLP*SPQWLWFADLLLLP
Trigger: TGGAAGTAGAAGAAGATCCGCAAACCATAACCACTGAGGAGACAATGGAAGAAGACAAGAGCCAGTCGGATGTAGATTTTCAGTCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370792.7
ENST00000370793.5
ENST00000370794.7
CDS CAA 90 bp CAGCTTAGCAAGGTCTTCCTTGCCAGGAATTGGCAAGGACAGATCTaGAAAGGTCTCGAGGGTTACAGACACCTAAAATTGTTTTGTGTT +
Preference number: 6 (lower is better)
Translates to: QLSKVFLARNWQGQI*KGLEGYRHLKLFCV
Trigger: AACACAAAACAATTTTAGGTGTCTGTAACCCTCGAGACCTTTCAAGATCTGTCCTTGCCAATTCCTGGCAAGGAAGACCTTGCTAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461986.5
CDS CCA 72 bp GATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTaGTACCGGTTGTTCCTTTCCATGTTTAGTGCTTCC +
Preference number: 6 (lower is better)
Translates to: DGLYNLACFCSG*YRLFLSMFSAS
Trigger: GGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370792.7
ENST00000370793.5
ENST00000524536.5
ENST00000530709.5
CDS CAA 90 bp GATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACCGGTaGTTCCTTTCCATGTTTAGTGCTTCCTTCAGGAGCTCTTGTAAA +
Preference number: 6 (lower is better)
Translates to: DGLYNLACFCSGWYR*FLSMFSASFRSSCK
Trigger: TTTACAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530709.5
CDS TCA 72 bp TCTGCTCTATCACTGTTGCTACAAGATTCACAAGACTaGAAATCTACATCCGACTGGCTCTTGTCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: SALSLLLQDSQD*KSTSDWLLSSS
Trigger: GGAAGAAGACAAGAGCCAGTCGGATGTAGATTTTCAGTCTTGTGAATCTTGTAGCAACAGTGATAGAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370792.7
ENST00000370793.5
ENST00000370794.7
CDS TCA 72 bp GTGTCCACTACTTGCAGTTCCATGATGGCAAATGACTaGCAGAAGATCATATGTCACAATTTGAGCTGGACT +
Preference number: 6 (lower is better)
Translates to: VSTTCSSMMAND*QKIICHNLSWT
Trigger: AGTCCAGCTCAAATTGTGACATATGATCTTCTGTCAGTCATTTGCCATCATGGAACTGCAAGTAGTGGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357428.5
ENST00000370792.7
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
ENST00000527390.1
CDS GCA 72 bp TTGTCTTCTTCCATTGTCTCCTCAGTGGTTATGGTTTaGGGATCTTCTTCTACTTCCATGACTTGCTCTTTC +
Preference number: 6 (lower is better)
Translates to: LSSSIVSSVVMV*GSSSTSMTCSF
Trigger: GAAAGAGCAAGTCATGGAAGTAGAAGAAGATCCGCAAACCATAACCACTGAGGAGACAATGGAAGAAGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370792.7
ENST00000370793.5
ENST00000370794.7
CDS GCA 72 bp TCGAGGGTTACAGACACCCTGTCACAAGTCAGACACTaGACTGAACTAATGATTGTTCCATCAAATATGTCT +
Preference number: 6 (lower is better)
Translates to: SRVTDTLSQVRH*TELMIVPSNMS
Trigger: AGACATATTTGATGGAACAATCATTAGTTCAGTGCAGTGTCTGACTTGTGACAGGGTGTCTGTAACCCTCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357428.5
ENST00000370792.7
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS CCA 72 bp TCTAAACCACTGCATACTGATGCAATAAAAAGTAGCTaGAGAGTCCTCTTTTTGGAACGCTCTGTTAAGCCG +
Preference number: 6 (lower is better)
Translates to: SKPLHTDAIKSS*RVLFLERSVKP
Trigger: CGGCTTAACAGAGCGTTCCAAAAAGAGGACTCTCCAGCTACTTTTTATTGCATCAGTATGCAGTGGTTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
CDS CCA 72 bp CCAACATATGAACATCTCCAGACATGCCCAAAGATTTaGTCCTTGGACTTTACAATCCTGACAAGTACCAAG +
Preference number: 6 (lower is better)
Translates to: PTYEHLQTCPKI*SLDFTILTSTK
Trigger: CTTGGTACTTGTCAGGATTGTAAAGTCCAAGGACCAAATCTTTGGGCATGTCTGGAGATGTTCATATGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525113.5
ENST00000528150.1
CDS CAA 72 bp CTTGTCTTCTTCCATTGTCTCCTCAGTGGTTATGGTTaGCGGATCTTCTTCTACTTCCATGACTTGCTCTTT +
Preference number: 6 (lower is better)
Translates to: LVFFHCLLSGYG*RIFFYFHDLLF
Trigger: AAAGAGCAAGTCATGGAAGTAGAAGAAGATCCGCAAACCATAACCACTGAGGAGACAATGGAAGAAGACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370792.7
ENST00000370793.5
ENST00000370794.7
CDS GCA 72 bp TCCTTGCCTAAGCATCACATTACCACATTTAGTGACTaGAATCTTAGTATTGTCAATAGGACCTGGAGGATC +
Preference number: 6 (lower is better)
Translates to: SLPKHHITTFSD*NLSIVNRTWRI
Trigger: GATCCTCCAGGTCCTATTGACAATACTAAGATTGCAGTCACTAAATGTGGTAATGTGATGCTTAGGCAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000481579.5
CDS GCA 72 bp ACCTTGCCTAAGCATCACATTACCACATTTAGTGACTaGAATCTTAGTATTGTCAATAGGACCTGGAGGATC +
Preference number: 6 (lower is better)
Translates to: TLPKHHITTFSD*NLSIVNRTWRI
Trigger: GATCCTCCAGGTCCTATTGACAATACTAAGATTGCAGTCACTAAATGTGGTAATGTGATGCTTAGGCAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533928.1
CDS CAA 72 bp ACATCTATTCTCCAGACATGCCCAAAGATTTGGTCCTaGGACTTTACAATCCTGACAAGTACCAAGGGATTT +
Preference number: 6 (lower is better)
Translates to: TSILQTCPKIWS*DFTILTSTKGF
Trigger: AAATCCCTTGGTACTTGTCAGGATTGTAAAGTCCAAGGACCAAATCTTTGGGCATGTCTGGAGAATAGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357428.5
ENST00000370792.7
ENST00000370793.5
ENST00000370794.7
ENST00000524536.5
ENST00000524778.1
ENST00000530709.5
CDS CAA 72 bp TATGAACATCTCCAGACATGCCCAAAGATTTGGTCCTaGGACTTTACAATCCTGACAAGTACCAAGGGATTT +
Preference number: 6 (lower is better)
Translates to: YEHLQTCPKIWS*DFTILTSTKGF
Trigger: AAATCCCTTGGTACTTGTCAGGATTGTAAAGTCCAAGGACCAAATCTTTGGGCATGTCTGGAGATGTTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525113.5
ENST00000528150.1
CDS CAA 90 bp CAGCCAACATATGAACATCTCCAGACATGCCCAAAGATTTGGTCCTaGGACTTTACAATCCTGACAAGTACCAAGGGATTTTTGTATCAA +
Preference number: 6 (lower is better)
Translates to: QPTYEHLQTCPKIWS*DFTILTSTKGFLYQ
Trigger: TTGATACAAAAATCCCTTGGTACTTGTCAGGATTGTAAAGTCCAAGGACCAAATCTTTGGGCATGTCTGGAGATGTTCATATGTTGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525113.5
ENST00000528150.1
CDS CAA 90 bp TGCCTAAGCATCACATTACCACATTTAGTGACTGCAATCTTAGTATaGTCAATAGGACCTGGAGGATCTCCATCTTTACCCTTCACAAAA +
Preference number: 6 (lower is better)
Translates to: CLSITLPHLVTAILV*SIGPGGSPSLPFTK
Trigger: TTTTGTGAAGGGTAAAGATGGAGATCCTCCAGGTCCTATTGACAATACTAAGATTGCAGTCACTAAATGTGGTAATGTGATGCTTAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000533928.1
CDS CCA 72 bp GAAGCTCTGCTGTGTATTTGCACTTTGACAGTTTCCTaGTTGTTTAAGTCGACTGTTTCAGATATAGAGTCT +
Preference number: 6 (lower is better)
Translates to: EALLCICTLTVS*LFKSTVSDIES
Trigger: AGACTCTATATCTGAAACAGTCGACTTAAACAACCAGGAAACTGTCAAAGTGCAAATACACAGCAGAGCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370792.7
ENST00000370793.5
ENST00000370794.7
CDS CCA 72 bp TCTAAACCACTGCATACTGATGCAATAAAAAGTAGCTaGAGAGTCCTCTTTTTGGAACGCTCTGTTAAGCTA +
Preference number: 6 (lower is better)
Translates to: SKPLHTDAIKSS*RVLFLERSVKL
Trigger: TAGCTTAACAGAGCGTTCCAAAAAGAGGACTCTCCAGCTACTTTTTATTGCATCAGTATGCAGTGGTTTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533928.1
CDS CAA 72 bp CATATGAACATCTATTCTCCAGACATGCCCAAAGATTaGGTCCTTGGACTTTACAATCCTGACAAGTACCAA +
Preference number: 6 (lower is better)
Translates to: HMNIYSPDMPKD*VLGLYNPDKYQ
Trigger: TTGGTACTTGTCAGGATTGTAAAGTCCAAGGACCAAATCTTTGGGCATGTCTGGAGAATAGATGTTCATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357428.5
ENST00000370792.7
ENST00000370793.5
ENST00000370794.7
ENST00000524536.5
ENST00000524778.1
ENST00000530709.5
CDS CAA 72 bp GCTCTGCTGTGTATTTGCACTTTGACAGTTTCCTGGTaGTTTAAGTCGACTGTTTCAGATATAGAGTCTCTA +
Preference number: 6 (lower is better)
Translates to: ALLCICTLTVSW*FKSTVSDIESL
Trigger: TAGAGACTCTATATCTGAAACAGTCGACTTAAACAACCAGGAAACTGTCAAAGTGCAAATACACAGCAGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370792.7
ENST00000370793.5
ENST00000370794.7
CDS CAA 72 bp ACTGAAGGAGGCTTGGTTCCATTATGTTCAATAAATTaGATATCCTTCTCCTCTCTTTTTGTGCCTCTTCGC +
Preference number: 6 (lower is better)
Translates to: TEGGLVPLCSIN*ISFSSLFVPLR
Trigger: GCGAAGAGGCACAAAAAGAGAGGAGAAGGATATCAAATTTATTGAACATAATGGAACCAAGCCTCCTTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357428.5
ENST00000370792.7
ENST00000370793.5
ENST00000370794.7
ENST00000472462.1
ENST00000481579.5
CDS CAA 72 bp ATCACATTACCACATTTAGTGACTGCAATCTTAGTATaGTCAATAGGACCTGGAGGATCTCCATCTTTACCC +
Preference number: 6 (lower is better)
Translates to: ITLPHLVTAILV*SIGPGGSPSLP
Trigger: GGGTAAAGATGGAGATCCTCCAGGTCCTATTGACAATACTAAGATTGCAGTCACTAAATGTGGTAATGTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370793.5
ENST00000370794.7
ENST00000533928.1
CDS CAA 72 bp GCAAATTGCTTATTATGGTCCTGTAATTATTTGATTTaGCCCCATGCTGACCTCCCAGCACAGAAAAACAAG +
Preference number: 6 (lower is better)
Translates to: ANCLLWSCNYLI*PHADLPAQKNK
Trigger: CTTGTTTTTCTGTGCTGGGAGGTCAGCATGGGGCAAAATCAAATAATTACAGGACCATAATAAGCAATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462192.1
CDS CAA 90 bp TGGACATCAGTGATATATTCTGAAGCTCTGCTGTGTATTTGCACTTaGACAGTTTCCTGGTTGTTTAAGTCGACTGTTTCAGATATAGAG +
Preference number: 6 (lower is better)
Translates to: WTSVIYSEALLCICT*TVSWLFKSTVSDIE
Trigger: CTCTATATCTGAAACAGTCGACTTAAACAACCAGGAAACTGTCAAAGTGCAAATACACAGCAGAGCTTCAGAATATATCACTGATGTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370792.7
ENST00000370793.5
ENST00000370794.7
CDS TCA 72 bp ATACTTACTACTTGCAGTTCCATGATGGCAAATGACTaGCAGAAGATCATATGTCACAATTTGAGCTGGACT +
Preference number: 6 (lower is better)
Translates to: ILTTCSSMMAND*QKIICHNLSWT
Trigger: AGTCCAGCTCAAATTGTGACATATGATCTTCTGTCAGTCATTTGCCATCATGGAACTGCAAGTAGTAAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461986.5
ENST00000498328.1
ENST00000531637.5
CDS CAA 72 bp TTAACAGCAAATTGCTTATTATGGTCCTGTAATTATTaGATTTTGCCCCATGCTGACCTCCCAGCACAGAAA +
Preference number: 6 (lower is better)
Translates to: LTANCLLWSCNY*ILPHADLPAQK
Trigger: TTTCTGTGCTGGGAGGTCAGCATGGGGCAAAATCAAATAATTACAGGACCATAATAAGCAATTTGCTGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462192.1
CDS CAA 90 bp TATTCTGAAGCTCTGCTGTGTATTTGCACTTTGACAGTTTCCTGGTaGTTTAAGTCGACTGTTTCAGATATAGAGTCTCTATCTTTATCA +
Preference number: 6 (lower is better)
Translates to: YSEALLCICTLTVSW*FKSTVSDIESLSLS
Trigger: TGATAAAGATAGAGACTCTATATCTGAAACAGTCGACTTAAACAACCAGGAAACTGTCAAAGTGCAAATACACAGCAGAGCTTCAGAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357428.5
ENST00000370792.7
ENST00000370793.5
ENST00000370794.7
CDS CAA 90 bp AAATTAACAGCAAATTGCTTATTATGGTCCTGTAATTATTTGATTTaGCCCCATGCTGACCTCCCAGCACAGAAAAACAAGGTTCCATTT +
Preference number: 6 (lower is better)
Translates to: KLTANCLLWSCNYLI*PHADLPAQKNKVPF
Trigger: AAATGGAACCTTGTTTTTCTGTGCTGGGAGGTCAGCATGGGGCAAAATCAAATAATTACAGGACCATAATAAGCAATTTGCTGTTAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462192.1