Pregenerated sensors for USP32 (Homo sapiens)
Ensembl gene IDs: ENSG00000170832Ensembl transcript IDs: ENST00000300896.9, ENST00000393003.7, ENST00000587651.1, ENST00000588898.1, ENST00000589335.5, ENST00000589552.1, ENST00000589761.1, ENST00000590133.5, ENST00000590297.1, ENST00000591768.1, ENST00000592339.5
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACGTTTGCTGAACATGCTGGCATAGAGGACAAGTTAAAAAGTTTCTaGACTCAAAGGGTGCTCCTCCAAAGCTCCGGGCCTCCGGGCTAC | + |
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Preference number: 1 (lower is better) Translates to: TFAEHAGIEDKLKSF*TQRVLLQSSGPPGY Trigger: GTAGCCCGGAGGCCCGGAGCTTTGGAGGAGCACCCTTTGAGTCCAGAAACTTTTTAACTTGTCCTCTATGCCAGCATGTTCAGCAAACGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590297.1 |
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| 3UTR TCA 90 bp | GGCCTTCTTGGGGTGAGCCTAACTTACTGGTCAGCCAATGACTGCTaGGAGGTTGTGCTCTCAGCAGTTTACTGGTTGTGTTTAGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: GLLGVSLTYWSANDC*EVVLSAVYWLCLAS Trigger: ACTGGCTAAACACAACCAGTAAACTGCTGAGAGCACAACCTCTCAGCAGTCATTGGCTGACCAGTAAGTTAGGCTCACCCCAAGAAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR TCA 90 bp | TGGACAGGCATTTATTCCTGCTCTCCTTCAAATCATGAATCAGACTaGCAGCCCATGCAGACTTGCTGGATGGGAGGAAATGAAAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: WTGIYSCSPSNHESD*QPMQTCWMGGNESC Trigger: GCAGCTTTCATTTCCTCCCATCCAGCAAGTCTGCATGGGCTGTCAGTCTGATTCATGATTTGAAGGAGAGCAGGAATAAATGCCTGTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR CCA 90 bp | GTTTGGGGAATGCATTTAAAGTTTGGGCAGGTTACAAGCCTACCCTaGCTTTTACTTTCTGCACATGCAAGGCTTCACCTTCAACTAGGG | + |
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Preference number: 1 (lower is better) Translates to: VWGMHLKFGQVTSLP*LLLSAHARLHLQLG Trigger: CCCTAGTTGAAGGTGAAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAACCTGCCCAAACTTTAAATGCATTCCCCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR CCA 90 bp | GCCAGTAACATTCACACCCTTTTCCTGATGGATCTGTACATGGTTTaGGGAATGCATTTAAAGTTTGGGCAGGTTACAAGCCTACCCTGG | + |
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Preference number: 1 (lower is better) Translates to: ASNIHTLFLMDLYMV*GMHLKFGQVTSLPW Trigger: CCAGGGTAGGCTTGTAACCTGCCCAAACTTTAAATGCATTCCCCAAACCATGTACAGATCCATCAGGAAAAGGGTGTGAATGTTACTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR TCA 90 bp | TTATTATCCTTGGACAGGCATTTATTCCTGCTCTCCTTCAAATCATaGATCAGACTGACAGCCCATGCAGACTTGCTGGATGGGAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: LLSLDRHLFLLSFKS*IRLTAHADLLDGRK Trigger: TTTCCTCCCATCCAGCAAGTCTGCATGGGCTGTCAGTCTGATTCATGATTTGAAGGAGAGCAGGAATAAATGCCTGTCCAAGGATAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR CCA 90 bp | CTCACTGTTTACCACCATGATGGTATGTATTTATTTTATTATCCTTaGACAGGCATTTATTCCTGCTCTCCTTCAAATCATGAATCAGAC | + |
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Preference number: 1 (lower is better) Translates to: LTVYHHDGMYLFYYP*TGIYSCSPSNHESD Trigger: GTCTGATTCATGATTTGAAGGAGAGCAGGAATAAATGCCTGTCCAAGGATAATAAAATAAATACATACCATCATGGTGGTAAACAGTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR-3UTR GCA 90 bp | TACATGGTTTGGGGAATGCATTTAAAGTTTGGGCAGGTTACAAGCCTACCCTGGCAGCCCATGCAGACTTaGTGGATGGGAGGAAATGAA | + |
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Preference number: 2 (lower is better) Translates to: YMVWGMHLKFGQVTSLPWQPMQT*WMGGNE Trigger: TTCATTTCCTCCCATCCAGCAAGTCTGCATGGGCTG...CCAGGGTAGGCTTGTAACCTGCCCAAACTTTAAATGCATTCCCCAAACCATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR-3UTR CCA 90 bp | GTTACAAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTCACCTTCAACCCATGCAGACTTGCTaGATGGGAGGAAATGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: VTSLPWLLLSAHARLHLQPMQTC*MGGNES Trigger: GCTTTCATTTCCTCCCATCCAGCAAGTCTGCATGGG...TTGAAGGTGAAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR-3UTR TCA 90 bp | TTTGGGCAGGTTACAAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTCTCTCCTTCAAATCATaGATCAGACTGACAGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: FGQVTSLPWLLLSAHARLLSFKS*IRLTAH Trigger: ATGGGCTGTCAGTCTGATTCATGATTTGAAGGAGAG...AAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAACCTGCCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR-3UTR CCA 90 bp | GTTACAAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTCACCTTCAATGCAGACTTGCTGGATaGGAGGAAATGAAAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: VTSLPWLLLSAHARLHLQCRLAG*EEMKAA Trigger: AGCAGCTTTCATTTCCTCCCATCCAGCAAGTCTGCA...TTGAAGGTGAAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR-3UTR GCA 90 bp | GTACATGGTTTGGGGAATGCATTTAAAGTTTGGGCAGGTTACAAGCCTACCCTGGGAGGAAATGAAAGCTaGTCCTGGTTAAATTACCAC | + |
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Preference number: 2 (lower is better) Translates to: VHGLGNAFKVWAGYKPTLGGNES*SWLNYH Trigger: GTGGTAATTTAACCAGGAGCAGCTTTCATTTCCTCC...CAGGGTAGGCTTGTAACCTGCCCAAACTTTAAATGCATTCCCCAAACCATGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR-3UTR CCA 90 bp | AGGCGGATAAGTGGAAGGTTTATTCCTCCCCTTACAACAACAACAACGACAACAAAGTTAAAAAGTTTCTaGACTCAAAGGGTGCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: RRISGRFIPPLTTTTTTTKLKSF*TQRVLL Trigger: GAGGAGCACCCTTTGAGTCCAGAAACTTTTTAACTT...TGTTGTCGTTGTTGTTGTTGTAAGGGGAGGAATAAACCTTCCACTTATCCGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590297.1 |
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| 3UTR-3UTR GCA 90 bp | AGGCTTCACCTTCAACTAGGGAAGAATAAAGTGCTAAAGCCCACTTTGGTTTCTACAGGCATTTATTCCTaGTCTCCTTCAAATCATGAA | + |
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Preference number: 2 (lower is better) Translates to: RLHLQLGKNKVLKPTLVSTGIYS*SPSNHE Trigger: TTCATGATTTGAAGGAGAGCAGGAATAAATGCCTGT...AGAAACCAAAGTGGGCTTTAGCACTTTATTCTTCCCTAGTTGAAGGTGAAGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR TCA 72 bp | GGGGTGAGCCTAACTTACTGGTCAGCCAATGACTGCTaGGAGGTTGTGCTCTCAGCAGTTTACTGGTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: GVSLTYWSANDC*EVVLSAVYWLC Trigger: ACACAACCAGTAAACTGCTGAGAGCACAACCTCTCAGCAGTCATTGGCTGACCAGTAAGTTAGGCTCACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR TCA 72 bp | CCTTCTTGGGGTGAGCCTAACTTACTGGTCAGCCAATaGCTGCTGAGAGGTTGTGCTCTCAGCAGTTTACTG | + |
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Preference number: 3 (lower is better) Translates to: PSWGEPNLLVSQ*LLRGCALSSLL Trigger: CAGTAAACTGCTGAGAGCACAACCTCTCAGCAGTCATTGGCTGACCAGTAAGTTAGGCTCACCCCAAGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR TCA 72 bp | CTGACAGCCCATGCAGACTTGCTGGATGGGAGGAAATaGAAGCTGCTCCTGGTTAAATTACCACACACTTCC | + |
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Preference number: 3 (lower is better) Translates to: LTAHADLLDGRK*KLLLVKLPHTS Trigger: GGAAGTGTGTGGTAATTTAACCAGGAGCAGCTTTCATTTCCTCCCATCCAGCAAGTCTGCATGGGCTGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR CCA 72 bp | GAACATGCTGGCATAGAGGACAAGTTAAAAAGTTTCTaGACTCAAAGGGTGCTCCTCCAAAGCTCCGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: EHAGIEDKLKSF*TQRVLLQSSGP Trigger: AGGCCCGGAGCTTTGGAGGAGCACCCTTTGAGTCCAGAAACTTTTTAACTTGTCCTCTATGCCAGCATGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590297.1 |
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| 3UTR TCA 72 bp | AGCCTTGTACAAGCAGTCTACAGATCACTGGGGACATaGGAAAGCTTGCTAAGGCTCACTATGGTGATCCTG | + |
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Preference number: 3 (lower is better) Translates to: SLVQAVYRSLGT*ESLLRLTMVIL Trigger: CAGGATCACCATAGTGAGCCTTAGCAAGCTTTCTCATGTCCCCAGTGATCTGTAGACTGCTTGTACAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR GCA 72 bp | TGGGCAGGTTACAAGCCTACCCTGGCTTTTACTTTCTaGACATGCAAGGCTTCACCTTCAACTAGGGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: WAGYKPTLAFTF*TCKASPSTREE Trigger: TTCTTCCCTAGTTGAAGGTGAAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAACCTGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR-3UTR CAA 90 bp | TTTGGGCAGGTTACAAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTGTGCTAAAGCCCACTTaGGTTTCTCCTGAGTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: FGQVTSLPWLLLSAHARLVLKPT*VSPEFV Trigger: CACAAACTCAGGAGAAACCAAAGTGGGCTTTAGCAC...AAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAACCTGCCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR GCA 72 bp | CCCATGCAGACTTGCTGGATGGGAGGAAATGAAAGCTaGTCCTGGTTAAATTACCACACACTTCCATTGTTC | + |
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Preference number: 3 (lower is better) Translates to: PMQTCWMGGNES*SWLNYHTLPLF Trigger: GAACAATGGAAGTGTGTGGTAATTTAACCAGGAGCAGCTTTCATTTCCTCCCATCCAGCAAGTCTGCATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR TCA 72 bp | TTGGACAGGCATTTATTCCTGCTCTCCTTCAAATCATaGATCAGACTGACAGCCCATGCAGACTTGCTGGAT | + |
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Preference number: 3 (lower is better) Translates to: LDRHLFLLSFKS*IRLTAHADLLD Trigger: ATCCAGCAAGTCTGCATGGGCTGTCAGTCTGATTCATGATTTGAAGGAGAGCAGGAATAAATGCCTGTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR CCA 72 bp | CAGACTTGCTGGATGGGAGGAAATGAAAGCTGCTCCTaGTTAAATTACCACACACTTCCATTGTTCTCACCA | + |
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Preference number: 3 (lower is better) Translates to: QTCWMGGNESCS*LNYHTLPLFSP Trigger: TGGTGAGAACAATGGAAGTGTGTGGTAATTTAACCAGGAGCAGCTTTCATTTCCTCCCATCCAGCAAGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR CCA 72 bp | ATGCATTTAAAGTTTGGGCAGGTTACAAGCCTACCCTaGCTTTTACTTTCTGCACATGCAAGGCTTCACCTT | + |
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Preference number: 3 (lower is better) Translates to: MHLKFGQVTSLP*LLLSAHARLHL Trigger: AAGGTGAAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAACCTGCCCAAACTTTAAATGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| 3UTR CCA 72 bp | TACCACCATGATGGTATGTATTTATTTTATTATCCTTaGACAGGCATTTATTCCTGCTCTCCTTCAAATCAT | + |
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Preference number: 3 (lower is better) Translates to: YHHDGMYLFYYP*TGIYSCSPSNH Trigger: ATGATTTGAAGGAGAGCAGGAATAAATGCCTGTCCAAGGATAATAAAATAAATACATACCATCATGGTGGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| CDS-3UTR GCA 90 bp | TCAAAGGGTGCTCCTCCAAAGCTCCGGGCCTCCGGGCTACCCCTACTTGAAGCCTATGCCCCTCTCCTGTaGCCGAGGTGGCCGCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: SKGAPPKLRASGLPLLEAYAPLL*PRWPLG Trigger: ACCCAGCGGCCACCTCGGGCACAGGAGAGGGGCATA...GGCTTCAAGTAGGGGTAGCCCGGAGGCCCGGAGCTTTGGAGGAGCACCCTTTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590297.1 |
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| CDS-3UTR GCA 90 bp | ACTCAAAGGGTGCTCCTCCAAAGCTCCGGGCCTCCGGGCTACCCCTACTTGAAGCAGCCTCTCCTGGCCTaGTGTGCGCTCTGCCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: TQRVLLQSSGPPGYPYLKQPLLA*CALCQS Trigger: ACTTTGGCAGAGCGCACAGCAGGCCAGGAGAGGCTG...CTTCAAGTAGGGGTAGCCCGGAGGCCCGGAGCTTTGGAGGAGCACCCTTTGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590297.1 |
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| CDS-3UTR GCA 90 bp | TCAAAGGGTGCTCCTCCAAAGCTCCGGGCCTCCGGGCTACCCCTACTTGAAGCCTCTGGACTCAAAGGGTaGTCCTCCAAAGCTCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: SKGAPPKLRASGLPLLEASGLKG*SSKAPG Trigger: GCCCGGAGCTTTGGAGGAGCACCCTTTGAGTCCAGA...GGCTTCAAGTAGGGGTAGCCCGGAGGCCCGGAGCTTTGGAGGAGCACCCTTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590297.1 |
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| CDS-3UTR CCA 90 bp | AAGTTAAAAAGTTTCTGGACTCAAAGGGTGCTCCTCCAAAGCTCCGGGCCTCCGGGCGCCAGCCTCTCCTaGCCTGCTGTGCGCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: KLKSFWTQRVLLQSSGPPGASLS*PAVRSA Trigger: GGCAGAGCGCACAGCAGGCCAGGAGAGGCTGGCGCC...CGGAGGCCCGGAGCTTTGGAGGAGCACCCTTTGAGTCCAGAAACTTTTTAACTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590297.1 |
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| CDS-3UTR GCA 90 bp | AAAGTTTCTGGACTCAAAGGGTGCTCCTCCAAAGCTCCGGGCCTCCGGGCTACCTCTCCTGGCCTGCTGTaGGCTCTGCCAAAGTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: KVSGLKGCSSKAPGLRATSPGLL*ALPKSS Trigger: CGAAGACTTTGGCAGAGCGCACAGCAGGCCAGGAGA...GGTAGCCCGGAGGCCCGGAGCTTTGGAGGAGCACCCTTTGAGTCCAGAAACTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590297.1 |
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| CDS-3UTR TCA 90 bp | AAAGTTTCTGGACTCAAAGGGTGCTCCTCCAAAGCTCCGGGCCTCCGGGCTACCCAACAAGACGTTTGCTaGACATGCTGGCATAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: KVSGLKGCSSKAPGLRATQQDVC*TCWHRG Trigger: TCCTCTATGCCAGCATGTTCAGCAAACGTCTTGTTG...GGTAGCCCGGAGGCCCGGAGCTTTGGAGGAGCACCCTTTGAGTCCAGAAACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590297.1 |
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| CDS-3UTR CCA 90 bp | ACATGCTGGCATAGAGGACAAGTTAAAAAGTTTCTGGACTCAAAGGGTGCTCCTCAGGGCCACACTGAGTaGGGACAACTGGGCCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: TCWHRGQVKKFLDSKGAPQGHTE*GQLGPG Trigger: GCCCGGGCCCAGTTGTCCCCACTCAGTGTGGCCCTG...AGGAGCACCCTTTGAGTCCAGAAACTTTTTAACTTGTCCTCTATGCCAGCATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590297.1 |
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| CDS-3UTR GCA 90 bp | ATTCCTGCTCTCCTTCAAATCATGAATCAGACTGACAGCCCATGCAGACTTGCTACTCCTTGGCACCCATaGTCCCCTCATCCCCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: IPALLQIMNQTDSPCRLATPWHP*SPHPLG Trigger: GCCGAGGGGATGAGGGGAGCATGGGTGCCAAGGAGT...AGCAAGTCTGCATGGGCTGTCAGTCTGATTCATGATTTGAAGGAGAGCAGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| CDS-3UTR TCA 90 bp | ATTCCTGCTCTCCTTCAAATCATGAATCAGACTGACAGCCCATGCAGACTTGCTGCGCCTCCTCGTAGCTaGGGAATCCGATCCGTGACT | + |
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Preference number: 4 (lower is better) Translates to: IPALLQIMNQTDSPCRLAAPPRS*GIRSVT Trigger: AGTCACGGATCGGATTCCTCAGCTACGAGGAGGCGC...AGCAAGTCTGCATGGGCTGTCAGTCTGATTCATGATTTGAAGGAGAGCAGGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| CDS-3UTR TCA 90 bp | AAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTCACCTTCAACTAGGCAAGCACTTCCCGGATaGAGCAGTGCTGGCCCATGT | + |
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Preference number: 4 (lower is better) Translates to: KPTLAFTFCTCKASPSTRQALPG*SSAGPC Trigger: ACATGGGCCAGCACTGCTTCATCCGGGAAGTGCTTG...CCTAGTTGAAGGTGAAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| CDS-3UTR GCA 90 bp | ATTCCTGCTCTCCTTCAAATCATGAATCAGACTGACAGCCCATGCAGACTTGCTCAGCCAGGGGTCCCCTaGAACAGGCTGATAACCCAC | + |
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Preference number: 4 (lower is better) Translates to: IPALLQIMNQTDSPCRLAQPGVP*NRLITH Trigger: GTGGGTTATCAGCCTGTTGCAGGGGACCCCTGGCTG...AGCAAGTCTGCATGGGCTGTCAGTCTGATTCATGATTTGAAGGAGAGCAGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| CDS-3UTR CCA 90 bp | CAGACTGACAGCCCATGCAGACTTGCTGGATGGGAGGAAATGAAAGCTGCTCCTCTCTCAGTTCAACCCTaGAGAGAACTCCATCACGGT | + |
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Preference number: 4 (lower is better) Translates to: QTDSPCRLAGWEEMKAAPLSVQP*RELHHG Trigger: ACCGTGATGGAGTTCTCTCCAGGGTTGAACTGAGAG...AGGAGCAGCTTTCATTTCCTCCCATCCAGCAAGTCTGCATGGGCTGTCAGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| CDS-3UTR TCA 90 bp | ATTCCTGCTCTCCTTCAAATCATGAATCAGACTGACAGCCCATGCAGACTTGCTGAGGAATCCGATCCGTaGCTCCTTGGCACCCATGCT | + |
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Preference number: 4 (lower is better) Translates to: IPALLQIMNQTDSPCRLAEESDP*LLGTHA Trigger: AGCATGGGTGCCAAGGAGTCACGGATCGGATTCCTC...AGCAAGTCTGCATGGGCTGTCAGTCTGATTCATGATTTGAAGGAGAGCAGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| CDS-3UTR TCA 90 bp | GTAAGGCCAGGTTTGCTCCATACCAGTGATAAAGTGCTCTCCACACAGGTTCTGGCTGCCAGCAGTTTCTaGGGCTTCAGATGCAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: VRPGLLHTSDKVLSTQVLAASSF*GFRCSR Trigger: TCTACTGCATCTGAAGCCTCAGAAACTGCTGGCAGC...CAGAACCTGTGTGGAGAGCACTTTATCACTGGTATGGAGCAAACCTGGCCTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589552.1 |
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| CDS-3UTR CCA 90 bp | GTTACAAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTCACCTTCAACGATCCGTGACTCCTTaGCACCCATGCTCCCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: VTSLPWLLLSAHARLHLQRSVTP*HPCSPH Trigger: ATGAGGGGAGCATGGGTGCCAAGGAGTCACGGATCG...TTGAAGGTGAAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| CDS-3UTR CCA 90 bp | TTTGGGCAGGTTACAAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTCACCTCAGCAACCTTTaGAGGCACTCCATCCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: FGQVTSLPWLLLSAHARLHLSNL*RHSIPK Trigger: CTTGGGGATGGAGTGCCTCCAAAGGTTGCTGAGGTG...AAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAACCTGCCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| CDS-3UTR TCA 90 bp | TTTGCTGAACATGCTGGCATAGAGGACAAGTTAAAAAGTTTCTGGACTCAAAGGCGGGCTACCCCTACTTaGAGCCGCTATGCCCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: FAEHAGIEDKLKSFWTQRRATPT*SRYAPL Trigger: GAGAGGGGCATAGCGGCTTCAAGTAGGGGTAGCCCG...CCTTTGAGTCCAGAAACTTTTTAACTTGTCCTCTATGCCAGCATGTTCAGCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000590297.1 |
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| CDS-3UTR GCA 90 bp | CAGACTGACAGCCCATGCAGACTTGCTGGATGGGAGGAAATGAAAGCTGCTCCTCAGGAATATCATCAGTaGGGTTGTCCTTCCAGACTT | + |
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Preference number: 4 (lower is better) Translates to: QTDSPCRLAGWEEMKAAPQEYHQ*GCPSRL Trigger: AAGTCTGGAAGGACAACCGCACTGATGATATTCCTG...AGGAGCAGCTTTCATTTCCTCCCATCCAGCAAGTCTGCATGGGCTGTCAGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| CDS-3UTR CCA 90 bp | CAGGTTTGCTCCATACCAGTGATAAAGTGCTCTCCACACAGGTTCTGGGACCATACCTGCTCCATAGGATaGGCTGCAGTTCCAAATGAG | + |
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Preference number: 4 (lower is better) Translates to: QVCSIPVIKCSPHRFWDHTCSIG*AAVPNE Trigger: CTCATTTGGAACTGCAGCCCATCCTATGGAGCAGGT...ATGGTCCCAGAACCTGTGTGGAGAGCACTTTATCACTGGTATGGAGCAAACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589552.1 |
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| CDS-3UTR TCA 90 bp | TTTGGGCAGGTTACAAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTAACCCCAGAACTATGTaGCACACCTGGAAAAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: FGQVTSLPWLLLSAHARLNPRTM*HTWKRR Trigger: CCTCCTTTTCCAGGTGTGTCACATAGTTCTGGGGTT...AAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAACCTGCCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| CDS-3UTR GCA 90 bp | CAGACTGACAGCCCATGCAGACTTGCTGGATGGGAGGAAATGAAAGCTGCTCCTCTTTGTGGTGTCATGTaGATTCAGTATGCCTTCTAC | + |
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Preference number: 4 (lower is better) Translates to: QTDSPCRLAGWEEMKAAPLCGVM*IQYAFY Trigger: GTAGAAGGCATACTGAATGCACATGACACCACAAAG...AGGAGCAGCTTTCATTTCCTCCCATCCAGCAAGTCTGCATGGGCTGTCAGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
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| CDS-3UTR GCA 90 bp | GTAAGGCCAGGTTTGCTCCATACCAGTGATAAAGTGCTCTCCACACAGGTTCTGATTCTATCTTCGACCTaGTCCATAGGATGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VRPGLLHTSDKVLSTQVLILSST*SIGWAA Trigger: TGCAGCCCATCCTATGGAGCAGGTCGAAGATAGAAT...CAGAACCTGTGTGGAGAGCACTTTATCACTGGTATGGAGCAAACCTGGCCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589552.1 |
||
| CDS-3UTR CCA 90 bp | CAGACTGACAGCCCATGCAGACTTGCTGGATGGGAGGAAATGAAAGCTGCTCCTTTACCATCCACCACGTaGAGCATTCTTTCCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTDSPCRLAGWEEMKAAPLPSTT*SILSIS Trigger: AGAAATGGAAAGAATGCTCCACGTGGTGGATGGTAA...AGGAGCAGCTTTCATTTCCTCCCATCCAGCAAGTCTGCATGGGCTGTCAGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR TCA 90 bp | CAGACTGACAGCCCATGCAGACTTGCTGGATGGGAGGAAATGAAAGCTGCTCCTAAGATCAATGATGTCTaGTTCCTCCAAATGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QTDSPCRLAGWEEMKAAPKINDV*FLQMCD Trigger: GTCACACATTTGGAGGAATCAGACATCATTGATCTT...AGGAGCAGCTTTCATTTCCTCCCATCCAGCAAGTCTGCATGGGCTGTCAGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR TCA 90 bp | TACATGGTTTGGGGAATGCATTTAAAGTTTGGGCAGGTTACAAGCCTACCCTGGAGATCACTGGGGACATaGGAAAGCTTGCTAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YMVWGMHLKFGQVTSLPWRSLGT*ESLLRL Trigger: GAGCCTTAGCAAGCTTTCTCATGTCCCCAGTGATCT...CCAGGGTAGGCTTGTAACCTGCCCAAACTTTAAATGCATTCCCCAAACCATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR TCA 90 bp | TACATGGTTTGGGGAATGCATTTAAAGTTTGGGCAGGTTACAAGCCTACCCTGGTTACTGGTCAGCCAATaGCTGCTGAGAGGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YMVWGMHLKFGQVTSLPWLLVSQ*LLRGCA Trigger: AGCACAACCTCTCAGCAGTCATTGGCTGACCAGTAA...CCAGGGTAGGCTTGTAACCTGCCCAAACTTTAAATGCATTCCCCAAACCATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR GCA 90 bp | CAGGTTTGCTCCATACCAGTGATAAAGTGCTCTCCACACAGGTTCTGGGACCATATACCAGTGATAAAGTaGTCTCCACACAGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QVCSIPVIKCSPHRFWDHIPVIK*SPHRFW Trigger: CCAGAACCTGTGTGGAGAGCACTTTATCACTGGTAT...ATGGTCCCAGAACCTGTGTGGAGAGCACTTTATCACTGGTATGGAGCAAACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589552.1 |
||
| CDS-3UTR GCA 90 bp | TTTGCTGAACATGCTGGCATAGAGGACAAGTTAAAAAGTTTCTGGACTCAAAGGTACTTGAAGCCGCTATaGCCCTCTCCTGTGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FAEHAGIEDKLKSFWTQRYLKPL*PSPVPE Trigger: CTCGGGCACAGGAGAGGGGCATAGCGGCTTCAAGTA...CCTTTGAGTCCAGAAACTTTTTAACTTGTCCTCTATGCCAGCATGTTCAGCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590297.1 |
||
| CDS-3UTR CCA 90 bp | TTTGGGCAGGTTACAAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTCTTCCTGAGTGTATCTaGGACTTTACCATCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: FGQVTSLPWLLLSAHARLLPECI*DFTIHH Trigger: GTGGTGGATGGTAAAGTCCCAGATACACTCAGGAAG...AAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAACCTGCCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR CCA 90 bp | CAGGTTTGCTCCATACCAGTGATAAAGTGCTCTCCACACAGGTTCTGGGACCATTCTCCACACAGGTTCTaGGACCATTTCATAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVCSIPVIKCSPHRFWDHSPHRF*DHFIVS Trigger: AGAGACTATGAAATGGTCCCAGAACCTGTGTGGAGA...ATGGTCCCAGAACCTGTGTGGAGAGCACTTTATCACTGGTATGGAGCAAACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589552.1 |
||
| CDS-3UTR TCA 90 bp | CAGACTGACAGCCCATGCAGACTTGCTGGATGGGAGGAAATGAAAGCTGCTCCTCAACTATTAAATTATTaGAGTGCAGCCCTTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QTDSPCRLAGWEEMKAAPQLLNY*SAALWM Trigger: CATCCAAAGGGCTGCACTTCAATAATTTAATAGTTG...AGGAGCAGCTTTCATTTCCTCCCATCCAGCAAGTCTGCATGGGCTGTCAGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR TCA 90 bp | GTTACAAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTCACCTTCAATGGACGAATAGGTGGTaGAACCAATGGGCCAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VTSLPWLLLSAHARLHLQWTNRW*NQWAKC Trigger: ACATTTGGCCCATTGGTTTCACCACCTATTCGTCCA...TTGAAGGTGAAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR TCA 90 bp | CAGGTTTGCTCCATACCAGTGATAAAGTGCTCTCCACACAGGTTCTGGGACCATTCCATTCAAAACAGATaGTGGCTCAATTACCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVCSIPVIKCSPHRFWDHSIQNR*WLNYHR Trigger: CCTGTGGTAATTGAGCCATCATCTGTTTTGAATGGA...ATGGTCCCAGAACCTGTGTGGAGAGCACTTTATCACTGGTATGGAGCAAACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589552.1 |
||
| CDS-3UTR TCA 90 bp | TACATGGTTTGGGGAATGCATTTAAAGTTTGGGCAGGTTACAAGCCTACCCTGGAATCATGAATCAGACTaGCAGCCCATGCAGACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YMVWGMHLKFGQVTSLPWNHESD*QPMQTC Trigger: GCAAGTCTGCATGGGCTGTCAGTCTGATTCATGATT...CCAGGGTAGGCTTGTAACCTGCCCAAACTTTAAATGCATTCCCCAAACCATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR CCA 90 bp | TACATGGTTTGGGGAATGCATTTAAAGTTTGGGCAGGTTACAAGCCTACCCTGGTGCAGACTTGCTGGATaGGAGGAAATGAAAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YMVWGMHLKFGQVTSLPWCRLAG*EEMKAA Trigger: AGCAGCTTTCATTTCCTCCCATCCAGCAAGTCTGCA...CCAGGGTAGGCTTGTAACCTGCCCAAACTTTAAATGCATTCCCCAAACCATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR TCA 90 bp | GTTACAAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTCACCTTCAATCTTCCAGAGTAAGATaGCCCATCTTTGTGGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTSLPWLLLSAHARLHLQSSRVR*PIFVVS Trigger: TGACACCACAAAGATGGGTCATCTTACTCTGGAAGA...TTGAAGGTGAAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR TCA 90 bp | GTTACAAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTCACCTTCAACTCTCCTTCAAATCATaGATCAGACTGACAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VTSLPWLLLSAHARLHLQLSFKS*IRLTAH Trigger: ATGGGCTGTCAGTCTGATTCATGATTTGAAGGAGAG...TTGAAGGTGAAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR GCA 90 bp | GTTACAAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTCACCTTCAACTGGCTTTTACTTTCTaGACATGCAAGGCTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VTSLPWLLLSAHARLHLQLAFTF*TCKASP Trigger: AGGTGAAGCCTTGCATGTGCAGAAAGTAAAAGCCAG...TTGAAGGTGAAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR CCA 90 bp | TTTGGGCAGGTTACAAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTGATGACCCATCTTTGTaGTGTCATGTGCATTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FGQVTSLPWLLLSAHARLDDPSL*CHVHSV Trigger: TACTGAATGCACATGACACCACAAAGATGGGTCATC...AAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAACCTGCCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR CCA 90 bp | AGGCTTCACCTTCAACTAGGGAAGAATAAAGTGCTAAAGCCCACTTTGGTTTCTCCCATGCAGACTTGCTaGATGGGAGGAAATGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLHLQLGKNKVLKPTLVSPMQTC*MGGNES Trigger: GCTTTCATTTCCTCCCATCCAGCAAGTCTGCATGGG...AGAAACCAAAGTGGGCTTTAGCACTTTATTCTTCCCTAGTTGAAGGTGAAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR CCA 90 bp | AAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTCACCTTCAACTAGGGTTACAAGCCTACCCTaGCTTTTACTTTCTGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: KPTLAFTFCTCKASPSTRVTSLP*LLLSAH Trigger: ATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAAC...CCTAGTTGAAGGTGAAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR CCA 90 bp | ACATGCTGGCATAGAGGACAAGTTAAAAAGTTTCTGGACTCAAAGGGTGCTCCTAGAAGGAATTCCAGGTaGTGTCAGGATCAGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TCWHRGQVKKFLDSKGAPRRNSR*CQDQHL Trigger: CAGATGCTGATCCTGACACCACCTGGAATTCCTTCT...AGGAGCACCCTTTGAGTCCAGAAACTTTTTAACTTGTCCTCTATGCCAGCATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590297.1 |
||
| CDS-3UTR TCA 90 bp | AGGCTTCACCTTCAACTAGGGAAGAATAAAGTGCTAAAGCCCACTTTGGTTTCTATTCCTCCAAATGTGTaGCTCCAGCCAGAGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLHLQLGKNKVLKPTLVSIPPNV*LQPEFG Trigger: ACCAAACTCTGGCTGGAGTCACACATTTGGAGGAAT...AGAAACCAAAGTGGGCTTTAGCACTTTATTCTTCCCTAGTTGAAGGTGAAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR TCA 90 bp | AGGCTTCACCTTCAACTAGGGAAGAATAAAGTGCTAAAGCCCACTTTGGTTTCTCTGGATGGGAGGAAATaGAAGCTGCTCCTGGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLHLQLGKNKVLKPTLVSLDGRK*KLLLVK Trigger: TTTAACCAGGAGCAGCTTTCATTTCCTCCCATCCAG...AGAAACCAAAGTGGGCTTTAGCACTTTATTCTTCCCTAGTTGAAGGTGAAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR GCA 90 bp | ATTCCTGCTCTCCTTCAAATCATGAATCAGACTGACAGCCCATGCAGACTTGCTGGAGGAAATGAAAGCTaGTCCTGGTTAAATTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: IPALLQIMNQTDSPCRLAGGNES*SWLNYH Trigger: GTGGTAATTTAACCAGGAGCAGCTTTCATTTCCTCC...AGCAAGTCTGCATGGGCTGTCAGTCTGATTCATGATTTGAAGGAGAGCAGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR GCA 90 bp | TTTGGGCAGGTTACAAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTTTTACTTTCTGCACATaGAAGGCTTCACCTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: FGQVTSLPWLLLSAHARLFTFCT*KASPST Trigger: AGTTGAAGGTGAAGCCTTGCATGTGCAGAAAGTAAA...AAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAACCTGCCCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR CCA 90 bp | ATTCCTGCTCTCCTTCAAATCATGAATCAGACTGACAGCCCATGCAGACTTGCTCTCTCAGCAGTTTACTaGTTGTGTTTAGCCAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: IPALLQIMNQTDSPCRLALSAVY*LCLASN Trigger: GTTACTGGCTAAACACAACCAGTAAACTGCTGAGAG...AGCAAGTCTGCATGGGCTGTCAGTCTGATTCATGATTTGAAGGAGAGCAGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR TCA 90 bp | AGGCTTCACCTTCAACTAGGGAAGAATAAAGTGCTAAAGCCCACTTTGGTTTCTCTGAGAAACACTTCCTaGGTGTATCTGGGACTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RLHLQLGKNKVLKPTLVSLRNTS*VYLGLY Trigger: GTAAAGTCCCAGATACACTCAGGAAGTGTTTCTCAG...AGAAACCAAAGTGGGCTTTAGCACTTTATTCTTCCCTAGTTGAAGGTGAAGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR TCA 90 bp | AGGCTTCACCTTCAACTAGGGAAGAATAAAGTGCTAAAGCCCACTTTGGTTTCTTACCTTTTCACCCTCTaGGAAACACTTCCTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLHLQLGKNKVLKPTLVSYLFTL*ETLPEC Trigger: ACACTCAGGAAGTGTTTCTCAGAGGGTGAAAAGGTA...AGAAACCAAAGTGGGCTTTAGCACTTTATTCTTCCCTAGTTGAAGGTGAAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR GCA 90 bp | AAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTCACCTTCAACTAGGACAGGCATTTATTCCTaGTCTCCTTCAAATCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: KPTLAFTFCTCKASPSTRTGIYS*SPSNHE Trigger: TTCATGATTTGAAGGAGAGCAGGAATAAATGCCTGT...CCTAGTTGAAGGTGAAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| 3UTR CAA 72 bp | CATTCACACCCTTTTCCTGATGGATCTGTACATGGTTaGGGGAATGCATTTAAAGTTTGGGCAGGTTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSHPFPDGSVHG*GNAFKVWAGYK Trigger: CTTGTAACCTGCCCAAACTTTAAATGCATTCCCCAAACCATGTACAGATCCATCAGGAAAAGGGTGTGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR TCA 90 bp | GTTACAAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTCACCTTCAAGTTTCTCAAGATCAATaGTGTCTGATTCCTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VTSLPWLLLSAHARLHLQVSQDQ*CLIPPN Trigger: ATTTGGAGGAATCAGACATCATTGATCTTGAGAAAC...TTGAAGGTGAAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR GCA 90 bp | TTTGGGCAGGTTACAAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTATTAAATTATTGAAGTaGAGCCCTTTGGATGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FGQVTSLPWLLLSAHARLIKLLK*SPLDVP Trigger: TGGAACATCCAAAGGGCTGCACTTCAATAATTTAAT...AAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAACCTGCCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR GCA 90 bp | GTACATGGTTTGGGGAATGCATTTAAAGTTTGGGCAGGTTACAAGCCTACCCTGCATGTGCATTCAGTATaGCTTCTACAATATCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VHGLGNAFKVWAGYKPTLHVHSV*LLQYQR Trigger: TCTCTGATATTGTAGAAGGCATACTGAATGCACATG...CAGGGTAGGCTTGTAACCTGCCCAAACTTTAAATGCATTCCCCAAACCATGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR CCA 90 bp | AGTGGAAGGTTTATTCCTCCCCTTACAACAACAACAACGACAACAATAACAACATTGGAGGCGGATAAGTaGAAGGTTTATTCCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGRFIPPLTTTTTTTITTLEADK*KVYSSP Trigger: AGGGGAGGAATAAACCTTCCACTTATCCGCCTCCAA...TGTTGTTATTGTTGTCGTTGTTGTTGTTGTAAGGGGAGGAATAAACCTTCCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590297.1 |
||
| CDS-3UTR TCA 90 bp | ATAAGTGGAAGGTTTATTCCTCCCCTTACAACAACAACAACGACAACAATAACAGTCAGGATCAGCATCTaGCAGTATTCTTGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISGRFIPPLTTTTTTTITVRISI*QYSWEK Trigger: CTTCTCCCAAGAATACTGTCAGATGCTGATCCTGAC...TGTTATTGTTGTCGTTGTTGTTGTTGTAAGGGGAGGAATAAACCTTCCACTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590297.1 |
||
| CDS-3UTR CCA 90 bp | TACATGGTTTGGGGAATGCATTTAAAGTTTGGGCAGGTTACAAGCCTACCCTGGGGTTCAAAAACTCATTaGCAAGAACATTTTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: YMVWGMHLKFGQVTSLPWGSKTH*QEHFSH Trigger: GTGTGAAAAATGTTCTTGCCAATGAGTTTTTGAACC...CCAGGGTAGGCTTGTAACCTGCCCAAACTTTAAATGCATTCCCCAAACCATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR CCA 90 bp | TTTGCTGAACATGCTGGCATAGAGGACAAGTTAAAAAGTTTCTGGACTCAAAGGAAGTTAAAAAGTTTCTaGACTCAAAGGGTGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FAEHAGIEDKLKSFWTQRKLKSF*TQRVLL Trigger: GAGGAGCACCCTTTGAGTCCAGAAACTTTTTAACTT...CCTTTGAGTCCAGAAACTTTTTAACTTGTCCTCTATGCCAGCATGTTCAGCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000590297.1 |
||
| 3UTR CAA 72 bp | CTTCAACTAGGGAAGAATAAAGTGCTAAAGCCCACTTaGGTTTCTCCTGAGTTTGTGTATAGCCTTGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: LQLGKNKVLKPT*VSPEFVYSLVQ Trigger: TTGTACAAGGCTATACACAAACTCAGGAGAAACCAAAGTGGGCTTTAGCACTTTATTCTTCCCTAGTTGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS TCA 90 bp | GTCCCACCGCACTGTCGCGAAGGCAGGCGAAGAACAGGGCCACACTaGGTGGGGACAACTGGGCCCGGGCCCAGAGGACACGAAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VPPHCREGRRRTGPH*VGTTGPGPRGHEGR Trigger: CCTTCCTTCGTGTCCTCTGGGCCCGGGCCCAGTTGTCCCCACTCAGTGTGGCCCTGTTCTTCGCCTGCCTTCGCGACAGTGCGGTGGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590297.1 |
||
| CDS TCA 90 bp | AAAGGGTGCTCCTCCAAAGCTCCGGGCCTCCGGGCTACCCCTACTTaGAGCCGCTATGCCCCTCTCCTGTGCCCGAGGTGGCCGCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KGCSSKAPGLRATPT*SRYAPLLCPRWPLG Trigger: ACCCAGCGGCCACCTCGGGCACAGGAGAGGGGCATAGCGGCTTCAAGTAGGGGTAGCCCGGAGGCCCGGAGCTTTGGAGGAGCACCCTTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590297.1 |
||
| CDS CCA 90 bp | CACCGCACTGTCGCGAAGGCAGGCGAAGAACAGGGCCACACTGAGTaGGGACAACTGGGCCCGGGCCCAGAGGACACGAAGGAAGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: HRTVAKAGEEQGHTE*GQLGPGPEDTKEGP Trigger: CGGACCTTCCTTCGTGTCCTCTGGGCCCGGGCCCAGTTGTCCCCACTCAGTGTGGCCCTGTTCTTCGCCTGCCTTCGCGACAGTGCGGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590297.1 |
||
| CDS CCA 90 bp | TCGCGAAGGCAGGCGAAGAACAGGGCCACACTGAGTGGGGACAACTaGGCCCGGGCCCAGAGGACACGAAGGAAGGTCCGGGAGAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SRRQAKNRATLSGDN*ARAQRTRRKVREKE Trigger: TTCCTTCTCCCGGACCTTCCTTCGTGTCCTCTGGGCCCGGGCCCAGTTGTCCCCACTCAGTGTGGCCCTGTTCTTCGCCTGCCTTCGCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590297.1 |
||
| CDS GCA 90 bp | TCTTGGGAGAAGGGGCGCCAGCCTCTCCTGGCCTGCTGTGCGCTCTaGCAAAGTCTTCGCTCGACCCCGCACATCTTGCTCCGTTCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: SWEKGRQPLLACCAL*QSLRSTPHILLRSL Trigger: TAGGGAACGGAGCAAGATGTGCGGGGTCGAGCGAAGACTTTGGCAGAGCGCACAGCAGGCCAGGAGAGGCTGGCGCCCCTTCTCCCAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588898.1 |
||
| CDS-3UTR CAA 90 bp | TCTGGACTCAAAGGGTGCTCCTCCAAAGCTCCGGGCCTCCGGGCTACCCCTACTCCGGGCTACCCCTACTaGAAGCCGCTATGCCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGLKGCSSKAPGLRATPTPGYPY*KPLCPS Trigger: AGAGGGGCATAGCGGCTTCAAGTAGGGGTAGCCCGG...AGTAGGGGTAGCCCGGAGGCCCGGAGCTTTGGAGGAGCACCCTTTGAGTCCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000590297.1 |
||
| CDS CCA 90 bp | TCAGCATCTGACAGTATTCTTGGGAGAAGGGGCGCCAGCCTCTCCTaGCCTGCTGTGCGCTCTGCCAAAGTCTTCGCTCGACCCCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SASDSILGRRGASLS*PAVRSAKVFARPRT Trigger: TGTGCGGGGTCGAGCGAAGACTTTGGCAGAGCGCACAGCAGGCCAGGAGAGGCTGGCGCCCCTTCTCCCAAGAATACTGTCAGATGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588898.1 |
||
| CDS-3UTR CAA 90 bp | CAGACTGACAGCCCATGCAGACTTGCTGGATGGGAGGAAATGAAAGCTGCTCCTCCGATCCGTGACTCCTaGGCACCCATGCTCCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QTDSPCRLAGWEEMKAAPPIRDS*APMLPS Trigger: TGAGGGGAGCATGGGTGCCAAGGAGTCACGGATCGG...AGGAGCAGCTTTCATTTCCTCCCATCCAGCAAGTCTGCATGGGCTGTCAGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS TCA 90 bp | CGTTTTAGCTCTACATCTGTAACAGGTGGTGTCAGGATCAGCATCTaGCAGTATTCTTGGGAGAAGGGGCGCCAGCCTCTCCTGGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RFSSTSVTGGVRISI*QYSWEKGRQPLLAC Trigger: GCAGGCCAGGAGAGGCTGGCGCCCCTTCTCCCAAGAATACTGTCAGATGCTGATCCTGACACCACCTGTTACAGATGTAGAGCTAAAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588898.1 |
||
| CDS-3UTR CAA 90 bp | AAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTCACCTTCAACTAGGTCACCTCAGCAACCTTaGGAGGCACTCCATCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: KPTLAFTFCTCKASPSTRSPQQP*EALHPQ Trigger: TTGGGGATGGAGTGCCTCCAAAGGTTGCTGAGGTGA...CCTAGTTGAAGGTGAAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR CAA 90 bp | ACATGCTGGCATAGAGGACAAGTTAAAAAGTTTCTGGACTCAAAGGGTGCTCCTCATCTGACAGTATTCTaGGGAGAAGGGGCGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TCWHRGQVKKFLDSKGAPHLTVF*GEGAPA Trigger: GGCTGGCGCCCCTTCTCCCAAGAATACTGTCAGATG...AGGAGCACCCTTTGAGTCCAGAAACTTTTTAACTTGTCCTCTATGCCAGCATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590297.1 |
||
| CDS-3UTR CAA 90 bp | AAGCCTACCCTGGCTTTTACTTTCTGCACATGCAAGGCTTCACCTTCAACTAGGAGTCCACAGGTCCTCTaGAAAGCATCCTTCAGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: KPTLAFTFCTCKASPSTRSPQVL*KASFSR Trigger: ACGACTGAAGGATGCTTTCAAGAGGACCTGTGGACT...CCTAGTTGAAGGTGAAGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR CAA 90 bp | CAGACTGACAGCCCATGCAGACTTGCTGGATGGGAGGAAATGAAAGCTGCTCCTCAGAGTCCTAATAATTaGTCCTTCTTCTTCCGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QTDSPCRLAGWEEMKAAPQSPNN*SFFFRS Trigger: ACTCCGGAAGAAGAAGGACAAATTATTAGGACTCTG...AGGAGCAGCTTTCATTTCCTCCCATCCAGCAAGTCTGCATGGGCTGTCAGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS GCA 90 bp | GTTGTTATTGTCAGAAGTGTTATGTTGTCGAGCAAAGCAAACATCTaGCCCTGGTGTGGCAGAATACAGAAAGCCGCTGCCAGCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VVIVRSVMLSSKANI*PWCGRIQKAAASSF Trigger: GAAACTGCTGGCAGCGGCTTTCTGTATTCTGCCACACCAGGGGCAGATGTTTGCTTTGCTCGACAACATAACACTTCTGACAATAACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000300896.9 ENST00000587651.1 ENST00000590133.5 ENST00000591768.1 ENST00000592339.5 |
||
| CDS CCA 90 bp | CAGGTTTGCTCCATACCAGTGATAAAGTGCTCTCCACACAGGTTCTaGGACCATTTCATAGTCTCTTCCATGAATCAGCTGTGGAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: QVCSIPVIKCSPHRF*DHFIVSSMNQLWSS Trigger: CGAACTCCACAGCTGATTCATGGAAGAGACTATGAAATGGTCCCAGAACCTGTGTGGAGAGCACTTTATCACTGGTATGGAGCAAACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000300896.9 ENST00000587651.1 ENST00000589552.1 ENST00000590133.5 ENST00000591768.1 ENST00000592339.5 |
||
| CDS-3UTR CAA 90 bp | CAGACTGACAGCCCATGCAGACTTGCTGGATGGGAGGAAATGAAAGCTGCTCCTGGATCTGTACATGGTTaGGGGAATGCATTTAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QTDSPCRLAGWEEMKAAPGSVHG*GNAFKV Trigger: AACTTTAAATGCATTCCCCAAACCATGTACAGATCC...AGGAGCAGCTTTCATTTCCTCCCATCCAGCAAGTCTGCATGGGCTGTCAGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS GCA 90 bp | GGGTTGGCATCGTATTTGACATATTCTTTCCACTGTTGCCACCACTaGATGGAGATGATAAACCAGTTGTGTCCTGCTTGCAGACCATAC | + |
|
Preference number: 5 (lower is better) Translates to: GLASYLTYSFHCCHH*MEMINQLCPACRPY Trigger: GTATGGTCTGCAAGCAGGACACAACTGGTTTATCATCTCCATGCAGTGGTGGCAACAGTGGAAAGAATATGTCAAATACGATGCCAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000300896.9 ENST00000589335.5 ENST00000590133.5 ENST00000592339.5 |
||
| CDS-3UTR CAA 90 bp | GTAAGGCCAGGTTTGCTCCATACCAGTGATAAAGTGCTCTCCACACAGGTTCTGTCTGTCTTGCTGTTCTaGATAACTGGTCTAGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: VRPGLLHTSDKVLSTQVLSVLLF*ITGLGK Trigger: CTTACCTAGACCAGTTATCAAGAACAGCAAGACAGA...CAGAACCTGTGTGGAGAGCACTTTATCACTGGTATGGAGCAAACCTGGCCTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589552.1 |
||
| CDS-3UTR CAA 90 bp | ATTCCTGCTCTCCTTCAAATCATGAATCAGACTGACAGCCCATGCAGACTTGCTGTGCTAAAGCCCACTTaGGTTTCTCCTGAGTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: IPALLQIMNQTDSPCRLAVLKPT*VSPEFV Trigger: CACAAACTCAGGAGAAACCAAAGTGGGCTTTAGCAC...AGCAAGTCTGCATGGGCTGTCAGTCTGATTCATGATTTGAAGGAGAGCAGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR CAA 90 bp | TACATGGTTTGGGGAATGCATTTAAAGTTTGGGCAGGTTACAAGCCTACCCTGGTTGAAGTGCAGCCCTTaGGATGTTCCACCAAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: YMVWGMHLKFGQVTSLPWLKCSP*DVPPKE Trigger: TTCTTTTGGTGGAACATCCAAAGGGCTGCACTTCAA...CCAGGGTAGGCTTGTAACCTGCCCAAACTTTAAATGCATTCCCCAAACCATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR CAA 90 bp | AGGCTTCACCTTCAACTAGGGAAGAATAAAGTGCTAAAGCCCACTTTGGTTTCTGACTCCAGCCAGAGTTaGGTAGAAAGTAGGAGTATC | + |
|
Preference number: 5 (lower is better) Translates to: RLHLQLGKNKVLKPTLVSDSSQS*VESRSI Trigger: GATACTCCTACTTTCTACCAAACTCTGGCTGGAGTC...AGAAACCAAAGTGGGCTTTAGCACTTTATTCTTCCCTAGTTGAAGGTGAAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR CAA 90 bp | TACATGGTTTGGGGAATGCATTTAAAGTTTGGGCAGGTTACAAGCCTACCCTGGATATCATCAGTGCGGTaGTCCTTCCAGACTTCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: YMVWGMHLKFGQVTSLPWISSVR*SFQTSK Trigger: TTTAGAAGTCTGGAAGGACAACCGCACTGATGATAT...CCAGGGTAGGCTTGTAACCTGCCCAAACTTTAAATGCATTCCCCAAACCATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR CAA 90 bp | TACATGGTTTGGGGAATGCATTTAAAGTTTGGGCAGGTTACAAGCCTACCCTGGTGGTTTCTCCTGAGTTaGTGTATAGCCTTGTACAAG | + |
|
Preference number: 5 (lower is better) Translates to: YMVWGMHLKFGQVTSLPWWFLLS*CIALYK Trigger: CTTGTACAAGGCTATACACAAACTCAGGAGAAACCA...CCAGGGTAGGCTTGTAACCTGCCCAAACTTTAAATGCATTCCCCAAACCATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS-3UTR CAA 90 bp | GTACATGGTTTGGGGAATGCATTTAAAGTTTGGGCAGGTTACAAGCCTACCCTGTCAGCAGTTTACTGGTaGTGTTTAGCCAGTAACATT | + |
|
Preference number: 5 (lower is better) Translates to: VHGLGNAFKVWAGYKPTLSAVYW*CLASNI Trigger: AATGTTACTGGCTAAACACAACCAGTAAACTGCTGA...CAGGGTAGGCTTGTAACCTGCCCAAACTTTAAATGCATTCCCCAAACCATGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393003.7 |
||
| CDS CCA 90 bp | GGGTTAAGGTGCAACAAAATATTCCCATTGGCTCCCAGCAAACACTaGTTGTTATTGTCAGAAGTGTTATGTTGTCGAGCAAAGCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: GLRCNKIFPLAPSKH*LLLSEVLCCRAKQT Trigger: TGTTTGCTTTGCTCGACAACATAACACTTCTGACAATAACAACCAGTGTTTGCTGGGAGCCAATGGGAATATTTTGTTGCACCTTAACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000300896.9 ENST00000587651.1 ENST00000590133.5 ENST00000591768.1 ENST00000592339.5 |
||
| CDS GCA 72 bp | TCCGGGCCTCCGGGCTACCCCTACTTGAAGCCGCTATaGCCCTCTCCTGTGCCCGAGGTGGCCGCTGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SGPPGYPYLKPL*PSPVPEVAAGW Trigger: CCACCCAGCGGCCACCTCGGGCACAGGAGAGGGGCATAGCGGCTTCAAGTAGGGGTAGCCCGGAGGCCCGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590297.1 |
||
| CDS CAA 90 bp | CAAAGGGTGCTCCTCCAAAGCTCCGGGCCTCCGGGCTACCCCTACTaGAAGCCGCTATGCCCCTCTCCTGTGCCCGAGGTGGCCGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: QRVLLQSSGPPGYPY*KPLCPSPVPEVAAG Trigger: CCCAGCGGCCACCTCGGGCACAGGAGAGGGGCATAGCGGCTTCAAGTAGGGGTAGCCCGGAGGCCCGGAGCTTTGGAGGAGCACCCTTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590297.1 |
||
| CDS TCA 72 bp | CACTGTCGCGAAGGCAGGCGAAGAACAGGGCCACACTaGGTGGGGACAACTGGGCCCGGGCCCAGAGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: HCREGRRRTGPH*VGTTGPGPRGH Trigger: GTGTCCTCTGGGCCCGGGCCCAGTTGTCCCCACTCAGTGTGGCCCTGTTCTTCGCCTGCCTTCGCGACAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590297.1 |
||
| CDS CCA 72 bp | GTCGCGAAGGCAGGCGAAGAACAGGGCCACACTGAGTaGGGACAACTGGGCCCGGGCCCAGAGGACACGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VAKAGEEQGHTE*GQLGPGPEDTK Trigger: CTTCGTGTCCTCTGGGCCCGGGCCCAGTTGTCCCCACTCAGTGTGGCCCTGTTCTTCGCCTGCCTTCGCGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590297.1 |
||
| CDS CAA 72 bp | CTCCTCCAAAGCTCCGGGCCTCCGGGCTACCCCTACTaGAAGCCGCTATGCCCCTCTCCTGTGCCCGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLQSSGPPGYPY*KPLCPSPVPEV Trigger: CACCTCGGGCACAGGAGAGGGGCATAGCGGCTTCAAGTAGGGGTAGCCCGGAGGCCCGGAGCTTTGGAGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590297.1 |
||
| CDS GCA 72 bp | AAGGGGCGCCAGCCTCTCCTGGCCTGCTGTGCGCTCTaGCAAAGTCTTCGCTCGACCCCGCACATCTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: KGRQPLLACCAL*QSLRSTPHILL Trigger: GAGCAAGATGTGCGGGGTCGAGCGAAGACTTTGGCAGAGCGCACAGCAGGCCAGGAGAGGCTGGCGCCCCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588898.1 |
||
| CDS CAA 90 bp | GCCTGCTGTGCGCTCTGCCAAAGTCTTCGCTCGACCCCGCACATCTaGCTCCGTTCCCTAGTCCAGATCCCAGCTGGAGGGGCCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ACCALCQSLRSTPHI*LRSLVQIPAGGASC Trigger: GCAGCTGGCCCCTCCAGCTGGGATCTGGACTAGGGAACGGAGCAAGATGTGCGGGGTCGAGCGAAGACTTTGGCAGAGCGCACAGCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588898.1 |
||
| CDS TCA 72 bp | CCTCAGCGCCTCCTCGTAGCTGAGGAATCCGATCCGTaGCTCCTTGGCACCCATGCTCCCCTCATCCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PQRLLVAEESDP*LLGTHAPLIPS Trigger: CGAGGGGATGAGGGGAGCATGGGTGCCAAGGAGTCACGGATCGGATTCCTCAGCTACGAGGAGGCGCTGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000300896.9 ENST00000393003.7 ENST00000589335.5 |
||
| CDS GCA 72 bp | TATTCTTGGGAGAAGGGGCGCCAGCCTCTCCTGGCCTaGTGTGCGCTCTGCCAAAGTCTTCGCTCGACCCCG | + |
|
Preference number: 6 (lower is better) Translates to: YSWEKGRQPLLA*CALCQSLRSTP Trigger: CGGGGTCGAGCGAAGACTTTGGCAGAGCGCACAGCAGGCCAGGAGAGGCTGGCGCCCCTTCTCCCAAGAATA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588898.1 |
||
| CDS CAA 72 bp | GCGCTCTGCCAAAGTCTTCGCTCGACCCCGCACATCTaGCTCCGTTCCCTAGTCCAGATCCCAGCTGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ALCQSLRSTPHI*LRSLVQIPAGG Trigger: CCCTCCAGCTGGGATCTGGACTAGGGAACGGAGCAAGATGTGCGGGGTCGAGCGAAGACTTTGGCAGAGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588898.1 |
||
| CDS CCA 72 bp | GACAGTATTCTTGGGAGAAGGGGCGCCAGCCTCTCCTaGCCTGCTGTGCGCTCTGCCAAAGTCTTCGCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: DSILGRRGASLS*PAVRSAKVFAR Trigger: TCGAGCGAAGACTTTGGCAGAGCGCACAGCAGGCCAGGAGAGGCTGGCGCCCCTTCTCCCAAGAATACTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588898.1 |
||
| CDS CAA 90 bp | AGAAGGAATTCCAGGTGGTGTCAGGATCAGCATCTGACAGTATTCTaGGGAGAAGGGGCGCCAGCCTCTCCTGGCCTGCTGTGCGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RRNSRWCQDQHLTVF*GEGAPASPGLLCAL Trigger: CAGAGCGCACAGCAGGCCAGGAGAGGCTGGCGCCCCTTCTCCCAAGAATACTGTCAGATGCTGATCCTGACACCACCTGGAATTCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590297.1 |
||
| CDS CAA 72 bp | AACAGGTGGTGTCAGGATCAGCATCTGACAGTATTCTaGGGAGAAGGGGCGCCAGCCTCTCCTGGCCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: NRWCQDQHLTVF*GEGAPASPGLL Trigger: CAGCAGGCCAGGAGAGGCTGGCGCCCCTTCTCCCAAGAATACTGTCAGATGCTGATCCTGACACCACCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588898.1 |
||
| CDS CAA 90 bp | TACATCTGTAACAGGTGGTGTCAGGATCAGCATCTGACAGTATTCTaGGGAGAAGGGGCGCCAGCCTCTCCTGGCCTGCTGTGCGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: YICNRWCQDQHLTVF*GEGAPASPGLLCAL Trigger: CAGAGCGCACAGCAGGCCAGGAGAGGCTGGCGCCCCTTCTCCCAAGAATACTGTCAGATGCTGATCCTGACACCACCTGTTACAGATGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588898.1 |
||
| CDS TCA 72 bp | CCTTTGGAGGCACTCCATCCCCAAGCACTTCCCGGATaGAGCAGTGCTGGCCCATGTAATATGAGAGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PLEALHPQALPG*SSAGPCNMRVH Trigger: GTGGACTCTCATATTACATGGGCCAGCACTGCTTCATCCGGGAAGTGCTTGGGGATGGAGTGCCTCCAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000300896.9 ENST00000393003.7 ENST00000588898.1 ENST00000589335.5 ENST00000589761.1 ENST00000590133.5 |
||
| CDS TCA 72 bp | CACTTCCCGGATGAAGCAGTGCTGGCCCATGTAATATaGGAGTCCACAGGTCCTCTTGAAAGCATCCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: HFPDEAVLAHVI*ESTGPLESILQ Trigger: CTGAAGGATGCTTTCAAGAGGACCTGTGGACTCTCATATTACATGGGCCAGCACTGCTTCATCCGGGAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000300896.9 ENST00000393003.7 ENST00000588898.1 ENST00000589335.5 ENST00000589761.1 ENST00000590133.5 |
||
| CDS GCA 72 bp | GTCAGAAGTGTTATGTTGTCGAGCAAAGCAAACATCTaGCCCTGGTGTGGCAGAATACAGAAAGCCGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VRSVMLSSKANI*PWCGRIQKAAA Trigger: GGCAGCGGCTTTCTGTATTCTGCCACACCAGGGGCAGATGTTTGCTTTGCTCGACAACATAACACTTCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000300896.9 ENST00000587651.1 ENST00000590133.5 ENST00000591768.1 ENST00000592339.5 |
||
| CDS CCA 72 bp | TATGTTGTCGAGCAAAGCAAACATCTGCCCCTGGTGTaGCAGAATACAGAAAGCCGCTGCCAGCAGTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: YVVEQSKHLPLV*QNTESRCQQFL Trigger: CAGAAACTGCTGGCAGCGGCTTTCTGTATTCTGCCACACCAGGGGCAGATGTTTGCTTTGCTCGACAACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000300896.9 ENST00000587651.1 ENST00000590133.5 ENST00000591768.1 ENST00000592339.5 |
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| CDS CCA 72 bp | AGTGTTATGTTGTCGAGCAAAGCAAACATCTGCCCCTaGTGTGGCAGAATACAGAAAGCCGCTGCCAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SVMLSSKANICP*CGRIQKAAASS Trigger: ACTGCTGGCAGCGGCTTTCTGTATTCTGCCACACCAGGGGCAGATGTTTGCTTTGCTCGACAACATAACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000300896.9 ENST00000587651.1 ENST00000590133.5 ENST00000591768.1 ENST00000592339.5 |
||
| CDS CAA 72 bp | CACTGTTGCCACCACTGCATGGAGATGATAAACCAGTaGTGTCCTGCTTGCAGACCATACCTGCTCTCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: HCCHHCMEMINQ*CPACRPYLLSR Trigger: ACGAGAGAGCAGGTATGGTCTGCAAGCAGGACACAACTGGTTTATCATCTCCATGCAGTGGTGGCAACAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000300896.9 ENST00000589335.5 ENST00000590133.5 ENST00000592339.5 |
||
| CDS CAA 90 bp | TATTCTTTCCACTGTTGCCACCACTGCATGGAGATGATAAACCAGTaGTGTCCTGCTTGCAGACCATACCTGCTCTCTCGTTCTAACCAT | + |
|
Preference number: 6 (lower is better) Translates to: YSFHCCHHCMEMINQ*CPACRPYLLSRSNH Trigger: ATGGTTAGAACGAGAGAGCAGGTATGGTCTGCAAGCAGGACACAACTGGTTTATCATCTCCATGCAGTGGTGGCAACAGTGGAAAGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000300896.9 ENST00000589335.5 ENST00000590133.5 ENST00000592339.5 |
||
| CDS CAA 90 bp | ATTGGCTCCCAGCAAACACTGGTTGTTATTGTCAGAAGTGTTATGTaGTCGAGCAAAGCAAACATCTGCCCCTGGTGTGGCAGAATACAG | + |
|
Preference number: 6 (lower is better) Translates to: IGSQQTLVVIVRSVM*SSKANICPWCGRIQ Trigger: CTGTATTCTGCCACACCAGGGGCAGATGTTTGCTTTGCTCGACAACATAACACTTCTGACAATAACAACCAGTGTTTGCTGGGAGCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000300896.9 ENST00000587651.1 ENST00000590133.5 ENST00000591768.1 ENST00000592339.5 |
||
| CDS CAA 72 bp | CAGCAAACACTGGTTGTTATTGTCAGAAGTGTTATGTaGTCGAGCAAAGCAAACATCTGCCCCTGGTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QQTLVVIVRSVM*SSKANICPWCG Trigger: GCCACACCAGGGGCAGATGTTTGCTTTGCTCGACAACATAACACTTCTGACAATAACAACCAGTGTTTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000300896.9 ENST00000587651.1 ENST00000590133.5 ENST00000591768.1 ENST00000592339.5 |
||
| CDS CCA 72 bp | CTAAAAGTGCAACCACCATGTCTCTCAGTTCAACCCTaGAGAGAACTCCATCACGGTCAACATCAAATACCT | + |
|
Preference number: 6 (lower is better) Translates to: LKVQPPCLSVQP*RELHHGQHQIP Trigger: AGGTATTTGATGTTGACCGTGATGGAGTTCTCTCCAGGGTTGAACTGAGAGACATGGTGGTTGCACTTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300896.9 ENST00000393003.7 ENST00000590133.5 |
||
| CDS CCA 72 bp | CTGCTTCCAATTCTATCTTCGACCTGCTCCATAGGATaGGCTGCAGTTCCAAATGAGTATTTTCCTCCATTC | + |
|
Preference number: 6 (lower is better) Translates to: LLPILSSTCSIG*AAVPNEYFPPF Trigger: GAATGGAGGAAAATACTCATTTGGAACTGCAGCCCATCCTATGGAGCAGGTCGAAGATAGAATTGGAAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000300896.9 ENST00000589552.1 ENST00000590133.5 ENST00000592339.5 |
||
| CDS CCA 72 bp | TCCATACCAGTGATAAAGTGCTCTCCACACAGGTTCTaGGACCATTTCATAGTCTCTTCCATGAATCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SIPVIKCSPHRF*DHFIVSSMNQL Trigger: CAGCTGATTCATGGAAGAGACTATGAAATGGTCCCAGAACCTGTGTGGAGAGCACTTTATCACTGGTATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000300896.9 ENST00000587651.1 ENST00000589552.1 ENST00000590133.5 ENST00000591768.1 ENST00000592339.5 |
||
| CDS CAA 90 bp | TGCAACAAAATATTCCCATTGGCTCCCAGCAAACACTGGTTGTTATaGTCAGAAGTGTTATGTTGTCGAGCAAAGCAAACATCTGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CNKIFPLAPSKHWLL*SEVLCCRAKQTSAP Trigger: AGGGGCAGATGTTTGCTTTGCTCGACAACATAACACTTCTGACAATAACAACCAGTGTTTGCTGGGAGCCAATGGGAATATTTTGTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000300896.9 ENST00000587651.1 ENST00000590133.5 ENST00000591768.1 ENST00000592339.5 |
||
| CDS GCA 72 bp | CAGAGAGATCCATATGTAATTCAGGAATATCATCAGTaGGGTTGTCCTTCCAGACTTCTAAAAGTGCAACCA | + |
|
Preference number: 6 (lower is better) Translates to: QRDPYVIQEYHQ*GCPSRLLKVQP Trigger: TGGTTGCACTTTTAGAAGTCTGGAAGGACAACCGCACTGATGATATTCCTGAATTACATATGGATCTCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300896.9 ENST00000393003.7 ENST00000590133.5 |
||
| CDS CAA 72 bp | AGATCCATATGTAATTCAGGAATATCATCAGTGCGGTaGTCCTTCCAGACTTCTAAAAGTGCAACCACCATG | + |
|
Preference number: 6 (lower is better) Translates to: RSICNSGISSVR*SFQTSKSATTM Trigger: CATGGTGGTTGCACTTTTAGAAGTCTGGAAGGACAACCGCACTGATGATATTCCTGAATTACATATGGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300896.9 ENST00000393003.7 ENST00000590133.5 |
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| CDS CAA 90 bp | TTAAGGTGCAACAAAATATTCCCATTGGCTCCCAGCAAACACTGGTaGTTATTGTCAGAAGTGTTATGTTGTCGAGCAAAGCAAACATCT | + |
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Preference number: 6 (lower is better) Translates to: LRCNKIFPLAPSKHW*LLSEVLCCRAKQTS Trigger: AGATGTTTGCTTTGCTCGACAACATAACACTTCTGACAATAACAACCAGTGTTTGCTGGGAGCCAATGGGAATATTTTGTTGCACCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000300896.9 ENST00000587651.1 ENST00000590133.5 ENST00000591768.1 ENST00000592339.5 |
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| CDS CAA 72 bp | AACAAAATATTCCCATTGGCTCCCAGCAAACACTGGTaGTTATTGTCAGAAGTGTTATGTTGTCGAGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: NKIFPLAPSKHW*LLSEVLCCRAK Trigger: CTTTGCTCGACAACATAACACTTCTGACAATAACAACCAGTGTTTGCTGGGAGCCAATGGGAATATTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000300896.9 ENST00000587651.1 ENST00000590133.5 ENST00000591768.1 ENST00000592339.5 |
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