RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP31 (Homo sapiens)

Ensembl gene IDs: ENSG00000103404

Ensembl transcript IDs: ENST00000219689.11, ENST00000219689.12, ENST00000563525.2, ENST00000567975.1

Found 281 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGAAAAACGAGAGCGGTGGCTACACACTGATGGGGCTGTGATGTaGTGGGCTGAACGCAATGACAGCATCGAAGGCAGCCAGTTGCCG +
Preference number: 1 (lower is better)
Translates to: TEKRERWLHTDGAVM*WAERNDSIEGSQLP
Trigger: CGGCAACTGGCTGCCTTCGATGCTGTCATTGCGTTCAGCCCAGCACATCACAGCCCCATCAGTGTGTAGCCACCGCTCTCGTTTTTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 90 bp GCGATACAGAAAAACGAGAGCGGTGGCTACACACTGATGGGGCTGTaGTGTGCTGGGCTGAACGCAATGACAGCATCGAAGGCAGCCAGT +
Preference number: 1 (lower is better)
Translates to: AIQKNESGGYTLMGL*CAGLNAMTASKAAS
Trigger: ACTGGCTGCCTTCGATGCTGTCATTGCGTTCAGCCCAGCACATCACAGCCCCATCAGTGTGTAGCCACCGCTCTCGTTTTTCTGTATCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CCA 90 bp CCACCAATTTCCACCAGACTGGCGAGTGCTAGGCCATTCACAACATaGTCCAAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGT +
Preference number: 1 (lower is better)
Translates to: PPISTRLASARPFTT*SKLPNWALNQKGPC
Trigger: ACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTTGGACCATGTTGTGAATGGCCTAGCACTCGCCAGTCTGGTGGAAATTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 90 bp CAGAAGGCAACTTCTTTCCTCTCCAAGCTACAAGATGAGGGAACATaGGCCCACAGACACAGGGCATCGTGGAGCTTCCCACCTCTAACG +
Preference number: 1 (lower is better)
Translates to: QKATSFLSKLQDEGT*AHRHRASWSFPPLT
Trigger: CGTTAGAGGTGGGAAGCTCCACGATGCCCTGTGTCTGTGGGCTCATGTTCCCTCATCTTGTAGCTTGGAGAGGAAAGAAGTTGCCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CCA 90 bp CTGGCGAGTGCTAGGCCATTCACAACATGGTCCAAGCTCCCCAACTaGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGTTTG +
Preference number: 1 (lower is better)
Translates to: LASARPFTTWSKLPN*ALNQKGPCISNGSL
Trigger: CAAACTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTTGGACCATGTTGTGAATGGCCTAGCACTCGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 90 bp GAACGCAATGACAGCATCGAAGGCAGCCAGTTGCCGCAGATGTACTaGGCAGATGAGAGTGGTACTGCTTTGAGAACCCACCAAAATCTG +
Preference number: 1 (lower is better)
Translates to: ERNDSIEGSQLPQMY*ADESGTALRTHQNL
Trigger: CAGATTTTGGTGGGTTCTCAAAGCAGTACCACTCTCATCTGCTCAGTACATCTGCGGCAACTGGCTGCCTTCGATGCTGTCATTGCGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CCA 90 bp AGGTTCTCCTTTGTAAGAAATGCAATTTGCACTGACACGGCCAGATaGAACACACTCCAAAACCTGCTTGTGAGTTCTGGGCATGAGATG +
Preference number: 1 (lower is better)
Translates to: RFSFVRNAICTDTAR*NTLQNLLVSSGHEM
Trigger: CATCTCATGCCCAGAACTCACAAGCAGGTTTTGGAGTGTGTTCCATCTGGCCGTGTCAGTGCAAATTGCATTTCTTACAAAGGAGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CCA 90 bp GTAACACTTGATCACACAACGCTTCAACATACCACCATTGGCTTTTaGCAGAAGGCAACTTCTTTCCTCTCCAAGCTACAAGATGAGGGA +
Preference number: 1 (lower is better)
Translates to: VTLDHTTLQHTTIGF*QKATSFLSKLQDEG
Trigger: TCCCTCATCTTGTAGCTTGGAGAGGAAAGAAGTTGCCTTCTGCCAAAAGCCAATGGTGGTATGTTGAAGCGTTGTGTGATCAAGTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 90 bp TCAAGACAGGTTTTGGTGCACATGTCACCACAGATAGGAAGGTGGTaGAAGGCTTCATTTCTACCTCGAAAATGTCTATCTGTGGCAGTA +
Preference number: 1 (lower is better)
Translates to: SRQVLVHMSPQIGRW*KASFLPRKCLSVAV
Trigger: TACTGCCACAGATAGACATTTTCGAGGTAGAAATGAAGCCTTTCACCACCTTCCTATCTGTGGTGACATGTGCACCAAAACCTGTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 90 bp AAACGACTTATGTCAATGAGGCTTAAATTCAATTTTAACCAGTGGTaGGAGGCACAGTTGGTGAGCAGACCTCTATGGAATGCAAACACG +
Preference number: 1 (lower is better)
Translates to: KRLMSMRLKFNFNQW*EAQLVSRPLWNANT
Trigger: CGTGTTTGCATTCCATAGAGGTCTGCTCACCAACTGTGCCTCTCACCACTGGTTAAAATTGAATTTAAGCCTCATTGACATAAGTCGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 90 bp CACTATCCACGGTGCATGAGTAATACCAAAGCACTTTGTGTACAGTaGTGTGACATGCAGCTTTCAAGACAACTACAGAAATTCCAGTGT +
Preference number: 1 (lower is better)
Translates to: HYPRCMSNTKALCVQ*CDMQLSRQLQKFQC
Trigger: ACACTGGAATTTCTGTAGTTGTCTTGAAAGCTGCATGTCACATCACTGTACACAAAGTGCTTTGGTATTACTCATGCACCGTGGATAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR GCA 90 bp GGTCTAAAATTCCAGCTACCCTCAACAGTAAGTGGTCTCCAGACTTaGAAGTTACCGGCTAATGCGCAAATTAGCAGCAAAATAAAGTTA +
Preference number: 1 (lower is better)
Translates to: GLKFQLPSTVSGLQT*KLPANAQISSKIKL
Trigger: TAACTTTATTTTGCTGCTAATTTGCGCATTAGCCGGTAACTTGCAAGTCTGGAGACCACTTACTGTTGAGGGTAGCTGGAATTTTAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 90 bp CTACATTGGAAACAATCACTTCGGCTGTTCAGTAATTTGTCCGAATaGAATGTAACGTCTGATGCCCCTCTATGTGAAATAAAGCACGCT +
Preference number: 1 (lower is better)
Translates to: LHWKQSLRLFSNLSE*NVTSDAPLCEIKHA
Trigger: AGCGTGCTTTATTTCACATAGAGGGGCATCAGACGTTACATTTCATTCGGACAAATTACTGAACAGCCGAAGTGATTGTTTCCAATGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 90 bp ACAACTGAAAATGAAAACGACACAGAAATCACTATCCACGGTGCATaGGTAATACCAAAGCACTTTGTGTACAGTGATGTGACATGCAGC +
Preference number: 1 (lower is better)
Translates to: TTENENDTEITIHGA*VIPKHFVYSDVTCS
Trigger: GCTGCATGTCACATCACTGTACACAAAGTGCTTTGGTATTACTCATGCACCGTGGATAGTGATTTCTGTGTCGTTTTCATTTTCAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR GCA 90 bp GGCCTACAAAGAGAACTCCAACTTCGGAAATACTGTAACTGCTTTTaGATTTGGTATGACACCACACCGTTTATAATAGCACCTAGGAAA +
Preference number: 1 (lower is better)
Translates to: GLQRELQLRKYCNCF*IWYDTTPFIIAPRK
Trigger: TTTCCTAGGTGCTATTATAAACGGTGTGGTGTCATACCAAATGCAAAAGCAGTTACAGTATTTCCGAAGTTGGAGTTCTCTTTGTAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR GCA 90 bp CACTGTGGTAACTTTCACAAGGCTAAATGTCTAAATCTTAAATACTaGCAAGGGTCTAAAATTCCAGCTACCCTCAACAGTAAGTGGTCT +
Preference number: 1 (lower is better)
Translates to: HCGNFHKAKCLNLKY*QGSKIPATLNSKWS
Trigger: AGACCACTTACTGTTGAGGGTAGCTGGAATTTTAGACCCTTGGCAGTATTTAAGATTTAGACATTTAGCCTTGTGAAAGTTACCACAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR GCA 90 bp TTGAAAGGCCTACAAAGAGAACTCCAACTTCGGAAATACTGTAACTaGTTTTGCATTTGGTATGACACCACACCGTTTATAATAGCACCT +
Preference number: 1 (lower is better)
Translates to: LKGLQRELQLRKYCN*FCIWYDTTPFIIAP
Trigger: AGGTGCTATTATAAACGGTGTGGTGTCATACCAAATGCAAAAGCAGTTACAGTATTTCCGAAGTTGGAGTTCTCTTTGTAGGCCTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR GCA 90 bp AGAAAAACCCTTCTAAGTCACTTTAAAGACACTATAAAAGTGTCATaGACTTGTATCCCAGCTACTCTGGAGAATAAGGCAGGAGACTTG +
Preference number: 1 (lower is better)
Translates to: RKTLLSHFKDTIKVS*TCIPATLENKAGDL
Trigger: CAAGTCTCCTGCCTTATTCTCCAGAGTAGCTGGGATACAAGTGCATGACACTTTTATAGTGTCTTTAAAGTGACTTAGAAGGGTTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563525.2
3UTR TCA 90 bp AGTAGTCAAATTCACAGAGACAGAAAGTATGGTGCTTGTCATGGCTaGAGGGAGAGAAAATGGGAATTAGTGTTTATTAGGTACAGAGTT +
Preference number: 1 (lower is better)
Translates to: SSQIHRDRKYGACHG*RERKWELVFIRYRV
Trigger: AACTCTGTACCTAATAAACACTAATTCCCATTTTCTCTCCCTTCAGCCATGACAAGCACCATACTTTCTGTCTCTGTGAATTTGACTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
3UTR CCA 90 bp GAGTTCTCTAGAAAGAAATATGTACAATTGCTAAAGGGACCGTCCTaGGTATCGTCTACAATTATTCCAGTTAGCTTGGTGTCAATGTTT +
Preference number: 1 (lower is better)
Translates to: EFSRKKYVQLLKGPS*VSSTIIPVSLVSMF
Trigger: AAACATTGACACCAAGCTAACTGGAATAATTGTAGACGATACCCAGGACGGTCCCTTTAGCAATTGTACATATTTCTTTCTAGAGAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CCA 90 bp AGAAACATTAGTGTTAAAATATTGCCCTTTACAAAGACTGGTAGATaGGGCGAAAGTGCAGAAAGCAAGAGTTTTTCCCTCGATTTGTTT +
Preference number: 1 (lower is better)
Translates to: RNISVKILPFTKTGR*GESAESKSFSLDLF
Trigger: AAACAAATCGAGGGAAAAACTCTTGCTTTCTGCACTTTCGCCCCATCTACCAGTCTTTGTAAAGGGCAATATTTTAACACTAATGTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CCA 90 bp CAAAGAGAACTCCAACTTCGGAAATACTGTAACTGCTTTTGCATTTaGTATGACACCACACCGTTTATAATAGCACCTAGGAAATTTCAT +
Preference number: 1 (lower is better)
Translates to: QRELQLRKYCNCFCI*YDTTPFIIAPRKFH
Trigger: ATGAAATTTCCTAGGTGCTATTATAAACGGTGTGGTGTCATACCAAATGCAAAAGCAGTTACAGTATTTCCGAAGTTGGAGTTCTCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 90 bp TATTTAAAAGCACATAAACTTAGCATGCTGTATTTACTGGCAAAGTaGCAAATGCTATTCAGAGAGAATCAAGACCTTCACTCTCTTGAC +
Preference number: 1 (lower is better)
Translates to: YLKAHKLSMLYLLAK*QMLFRENQDLHSLD
Trigger: GTCAAGAGAGTGAAGGTCTTGATTCTCTCTGAATAGCATTTGTCACTTTGCCAGTAAATACAGCATGCTAAGTTTATGTGCTTTTAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 90 bp ACAAATAATACAAAGTTCCACGCACCTCCAGAATACGTGTTTTATTaGAACTGTGCTTATGACTTGCATACTATTTCAAAAATCCAACCC +
Preference number: 1 (lower is better)
Translates to: TNNTKFHAPPEYVFY*NCAYDLHTISKIQP
Trigger: GGGTTGGATTTTTGAAATAGTATGCAAGTCATAAGCACAGTTTCAATAAAACACGTATTCTGGAGGTGCGTGGAACTTTGTATTATTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR TCA 90 bp CAAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGACACTGATGGGGCTGTaGTGTGCTGGGCTGAACGCA +
Preference number: 2 (lower is better)
Translates to: QAPQLGLESEGPLYFKWETLMGL*CAGLNA
Trigger: TGCGTTCAGCCCAGCACATCACAGCCCCATCAGTGT...CTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR GCA 90 bp CAAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGGATGGGGCTGTGATGTaGTGGGCTGAACGCAATGAC +
Preference number: 2 (lower is better)
Translates to: QAPQLGLESEGPLYFKWEDGAVM*WAERND
Trigger: GTCATTGCGTTCAGCCCAGCACATCACAGCCCCATC...CTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CCA 90 bp GATTTGACCGGAATCCACGTGATCTCTTTTCCCAGGAGAACTGTCACTCCATTTAAGCACAGGAGGCTTTaGTGGGAGGGCAGGGGTTCT +
Preference number: 2 (lower is better)
Translates to: DLTGIHVISFPRRTVTPFKHRRL*WEGRGS
Trigger: AGAACCCCTGCCCTCCCACCAAAGCCTCCTGTGCTT...AAATGGAGTGACAGTTCTCCTGGGAAAAGAGATCACGTGGATTCCGGTCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR TCA 90 bp AAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGTTTGCCGCAGATGTACTaGGCAGATGAGAGTGGTACT +
Preference number: 2 (lower is better)
Translates to: KLPNWALNQKGPCISNGSLPQMY*ADESGT
Trigger: AGTACCACTCTCATCTGCTCAGTACATCTGCGGCAA...ACTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR TCA 90 bp CAAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGGGAAATGGTCTAAGATaGCTGGAGCCTAACGGTTTG +
Preference number: 2 (lower is better)
Translates to: QAPQLGLESEGPLYFKWEGNGLR*LEPNGL
Trigger: CAAACCGTTAGGCTCCAGTCATCTTAGACCATTTCC...CTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR GCA 90 bp GATTTGACCGGAATCCACGTGATCTCTTTTCCCAGGAGAACTGTCACTCCATTTTCGAAGGCAGCCAGTTaGCGCAGATGTACTGAGCAG +
Preference number: 2 (lower is better)
Translates to: DLTGIHVISFPRRTVTPFSKAAS*RRCTEQ
Trigger: CTGCTCAGTACATCTGCGGCAACTGGCTGCCTTCGA...AAATGGAGTGACAGTTCTCCTGGGAAAAGAGATCACGTGGATTCCGGTCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CAA 90 bp CAGAAGGAACAGACTTGCTCAAGAGAACCACAAGCCTTAGCCGATTaGACCGGAATCCACGTGATCTCTTTTCCCAGGAGAACTGTCACT +
Preference number: 2 (lower is better)
Translates to: QKEQTCSREPQALAD*TGIHVISFPRRTVT
Trigger: AGTGACAGTTCTCCTGGGAAAAGAGATCACGTGGATTCCGGTCAAATCGGCTAAGGCTTGTGGTTCTCTTGAGCAAGTCTGTTCCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR TCA 90 bp GATTTGACCGGAATCCACGTGATCTCTTTTCCCAGGAGAACTGTCACTCCATTTAACCAGGACAGCGAGTaGAGAAGTGAGTACAGGGCT +
Preference number: 2 (lower is better)
Translates to: DLTGIHVISFPRRTVTPFNQDSE*RSEYRA
Trigger: AGCCCTGTACTCACTTCTTCACTCGCTGTCCTGGTT...AAATGGAGTGACAGTTCTCCTGGGAAAAGAGATCACGTGGATTCCGGTCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR GCA 90 bp AAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGTCAGAAGGAACAGACTTaGTCAAGAGAACCACAAGCC +
Preference number: 2 (lower is better)
Translates to: KLPNWALNQKGPCISNGSQKEQT*SREPQA
Trigger: GGCTTGTGGTTCTCTTGAGCAAGTCTGTTCCTTCTG...ACTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CCA 90 bp CAAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGAAAGGCTGCCACTCTTaGTCCCTTTACATACTGTTG +
Preference number: 2 (lower is better)
Translates to: QAPQLGLESEGPLYFKWEKGCHS*SLYILL
Trigger: CAACAGTATGTAAAGGGACCAAGAGTGGCAGCCTTT...CTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CAA 90 bp AGTGCTAGGCCATTCACAACATGGTCCAAGCTCCCCAACTGGGCCTaGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGTTTGATATCA +
Preference number: 2 (lower is better)
Translates to: SARPFTTWSKLPNWA*NQKGPCISNGSLIS
Trigger: TGATATCAAACTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTTGGACCATGTTGTGAATGGCCTAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR TCA 90 bp CAAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGCTGACAGACAGGATCTaGAGTGCATATGTAACACTT +
Preference number: 2 (lower is better)
Translates to: QAPQLGLESEGPLYFKWELTDRI*SAYVTL
Trigger: AAGTGTTACATATGCACTTCAGATCCTGTCTGTCAG...CTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR TCA 90 bp TATTTGCCTCCACAGTTAACACAGAGTGCCAAATTCTGGGATGTGTATTACTTAGCGGTGGCTACACACTaGTGGGGCTGTGATGTGCTG +
Preference number: 2 (lower is better)
Translates to: YLPPQLTQSAKFWDVYYLAVATH*WGCDVL
Trigger: CAGCACATCACAGCCCCATCAGTGTGTAGCCACCGC...TAAGTAATACACATCCCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR TCA 90 bp CCAAGAGTAGTCAAATTCACAGAGACAGAAAGTATGGTGCTTGTCATGGCTGAAGGCAGGAGACTTGCTTaGGCCCAGAAGTTCAAGGCT +
Preference number: 2 (lower is better)
Translates to: PRVVKFTETESMVLVMAEGRRLA*AQKFKA
Trigger: AGCCTTGAACTTCTGGGCTCAAGCAAGTCTCCTGCC...TTCAGCCATGACAAGCACCATACTTTCTGTCTCTGTGAATTTGACTACTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
3UTR-3UTR CCA 90 bp GATTTGACCGGAATCCACGTGATCTCTTTTCCCAGGAGAACTGTCACTCCATTTACTGACACGGCCAGATaGAACACACTCCAAAACCTG +
Preference number: 2 (lower is better)
Translates to: DLTGIHVISFPRRTVTPFTDTAR*NTLQNL
Trigger: CAGGTTTTGGAGTGTGTTCCATCTGGCCGTGTCAGT...AAATGGAGTGACAGTTCTCCTGGGAAAAGAGATCACGTGGATTCCGGTCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CAA 90 bp GGGCGAAAGTGCAGAAAGCAAGAGTTTTTCCCTCGATTTGTTTCGTaGTTAGAGTCACAGTTTTTAGAGCTCCTGGTGCCACCCACAATC +
Preference number: 2 (lower is better)
Translates to: GRKCRKQEFFPRFVS*LESQFLELLVPPTI
Trigger: GATTGTGGGTGGCACCAGGAGCTCTAAAAACTGTGACTCTAACAACGAAACAAATCGAGGGAAAAACTCTTGCTTTCTGCACTTTCGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR TCA 90 bp GATTTGACCGGAATCCACGTGATCTCTTTTCCCAGGAGAACTGTCACTCCATTTGATGTACTGAGCAGATaGGAGTGGTACTGCTTTGAG +
Preference number: 2 (lower is better)
Translates to: DLTGIHVISFPRRTVTPFDVLSR*EWYCFE
Trigger: CTCAAAGCAGTACCACTCTCATCTGCTCAGTACATC...AAATGGAGTGACAGTTCTCCTGGGAAAAGAGATCACGTGGATTCCGGTCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR GCA 90 bp GATTTGACCGGAATCCACGTGATCTCTTTTCCCAGGAGAACTGTCACTCCATTTTCTGGCTATCCAATCTaGCACTTCCTAGGACCTATC +
Preference number: 2 (lower is better)
Translates to: DLTGIHVISFPRRTVTPFSGYPI*HFLGPI
Trigger: GATAGGTCCTAGGAAGTGGCAGATTGGATAGCCAGA...AAATGGAGTGACAGTTCTCCTGGGAAAAGAGATCACGTGGATTCCGGTCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR GCA 90 bp GATTTGACCGGAATCCACGTGATCTCTTTTCCCAGGAGAACTGTCACTCCATTTCTACCAGGAGATGACTaGTCTAATCAGGCCCATCTA +
Preference number: 2 (lower is better)
Translates to: DLTGIHVISFPRRTVTPFLPGDD*SNQAHL
Trigger: TAGATGGGCCTGATTAGAGCAGTCATCTCCTGGTAG...AAATGGAGTGACAGTTCTCCTGGGAAAAGAGATCACGTGGATTCCGGTCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR GCA 90 bp AGAGAAGATAGAACTCAAGGAACTCTATCTAGCAAAACCGTAAATGGGGAGCGCCCAGACAATGCCATCTaGACATACCACTCCCCAATC +
Preference number: 2 (lower is better)
Translates to: REDRTQGTLSSKTVNGERPDNAI*TYHSPI
Trigger: GATTGGGGAGTGGTATGTGCAGATGGCATTGTCTGG...GCGCTCCCCATTTACGGTTTTGCTAGATAGAGTTCCTTGAGTTCTATCTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563525.2
3UTR-3UTR CCA 90 bp AAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGTCTAAAGGGACCGTCCTaGGTATCGTCTACAATTATT +
Preference number: 2 (lower is better)
Translates to: KLPNWALNQKGPCISNGSLKGPS*VSSTII
Trigger: AATAATTGTAGACGATACCCAGGACGGTCCCTTTAG...ACTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR TCA 90 bp AAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGTTGTGAGTTCTGGGCATaGGATGAAATCTTAAGAACA +
Preference number: 2 (lower is better)
Translates to: KLPNWALNQKGPCISNGSCEFWA*DEILRT
Trigger: TGTTCTTAAGATTTCATCTCATGCCCAGAACTCACA...ACTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR TCA 90 bp AAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGTCACACACAGCAATACTaGAAAGGGAGGTTATATATG +
Preference number: 2 (lower is better)
Translates to: KLPNWALNQKGPCISNGSHTQQY*KGRLYM
Trigger: CATATATAACCTCCCTTTTCAGTATTGCTGTGTGTG...ACTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR TCA 90 bp AAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGTAGTAATTTGTCCGAATaGAATGTAACGTCTGATGCC +
Preference number: 2 (lower is better)
Translates to: KLPNWALNQKGPCISNGSSNLSE*NVTSDA
Trigger: GGCATCAGACGTTACATTTCATTCGGACAAATTACT...ACTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR GCA 90 bp CAAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGGTCAAAGGTGTTAACTaGTCTACTACAGTGCAAAAT +
Preference number: 2 (lower is better)
Translates to: QAPQLGLESEGPLYFKWEVKGVN*STTVQN
Trigger: ATTTTGCACTGTAGTAGAGCAGTTAACACCTTTGAC...CTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR GCA 90 bp GATTTGACCGGAATCCACGTGATCTCTTTTCCCAGGAGAACTGTCACTCCATTTGTAAGAAATGCAATTTaGACTGACACGGCCAGATGG +
Preference number: 2 (lower is better)
Translates to: DLTGIHVISFPRRTVTPFVRNAI*TDTARW
Trigger: CCATCTGGCCGTGTCAGTGCAAATTGCATTTCTTAC...AAATGGAGTGACAGTTCTCCTGGGAAAAGAGATCACGTGGATTCCGGTCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR GCA 90 bp CAAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGTGGCAAAGTGACAAATaGTATTCAGAGAGAATCAAG +
Preference number: 2 (lower is better)
Translates to: QAPQLGLESEGPLYFKWEWQSDK*YSERIK
Trigger: CTTGATTCTCTCTGAATAGCATTTGTCACTTTGCCA...CTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CCA 90 bp GATTTGACCGGAATCCACGTGATCTCTTTTCCCAGGAGAACTGTCACTCCATTTAGTCAAGACAGGTTTTaGTGCACATGTCACCACAGA +
Preference number: 2 (lower is better)
Translates to: DLTGIHVISFPRRTVTPFSQDRF*CTCHHR
Trigger: TCTGTGGTGACATGTGCACCAAAACCTGTCTTGACT...AAATGGAGTGACAGTTCTCCTGGGAAAAGAGATCACGTGGATTCCGGTCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CCA 90 bp TATTTGCCTCCACAGTTAACACAGAGTGCCAAATTCTGGGATGTGTATTACTTAAGACACAGGGCATCGTaGAGCTTCCCACCTCTAACG +
Preference number: 2 (lower is better)
Translates to: YLPPQLTQSAKFWDVYYLRHRAS*SFPPLT
Trigger: CGTTAGAGGTGGGAAGCTCCACGATGCCCTGTGTCT...TAAGTAATACACATCCCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CCA 90 bp CAAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGTTATTCCAGATCCCATaGAAAACCAAAGGGATTTGT +
Preference number: 2 (lower is better)
Translates to: QAPQLGLESEGPLYFKWELFQIP*KTKGIC
Trigger: ACAAATCCCTTTGGTTTTCCATGGGATCTGGAATAA...CTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CAA 90 bp GAGGCACAGTTGGTGAGCAGACCTCTATGGAATGCAAACACGTATTaGAAAGGCCTACAAAGAGAACTCCAACTTCGGAAATACTGTAAC +
Preference number: 2 (lower is better)
Translates to: EAQLVSRPLWNANTY*KGLQRELQLRKYCN
Trigger: GTTACAGTATTTCCGAAGTTGGAGTTCTCTTTGTAGGCCTTTCAAATACGTGTTTGCATTCCATAGAGGTCTGCTCACCAACTGTGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR TCA 90 bp AAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGTGTTATTTTAAGGGAATaGCAATGTTCCCCTCAAATC +
Preference number: 2 (lower is better)
Translates to: KLPNWALNQKGPCISNGSVILRE*QCSPQI
Trigger: GATTTGAGGGGAACATTGTCATTCCCTTAAAATAAC...ACTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CCA 90 bp TATTTGCCTCCACAGTTAACACAGAGTGCCAAATTCTGGGATGTGTATTACTTAGAAAAACGAGAGCGGTaGCTACACACTGATGGGGCT +
Preference number: 2 (lower is better)
Translates to: YLPPQLTQSAKFWDVYYLEKRER*LHTDGA
Trigger: AGCCCCATCAGTGTGTAGCCACCGCTCTCGTTTTTC...TAAGTAATACACATCCCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CAA 90 bp CTAAAGGGACCGTCCTGGGTATCGTCTACAATTATTCCAGTTAGCTaGGTGTCAATGTTTTGCCTATGGCTGTTATTTGGTTCAATGGCA +
Preference number: 2 (lower is better)
Translates to: LKGPSWVSSTIIPVS*VSMFCLWLLFGSMA
Trigger: TGCCATTGAACCAAATAACAGCCATAGGCAAAACATTGACACCAAGCTAACTGGAATAATTGTAGACGATACCCAGGACGGTCCCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CAA 90 bp AACATGGTCCAAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTaGTATTTCAAATGGGAGTTTGATATCAGTATCTCTCAATTCTTT +
Preference number: 2 (lower is better)
Translates to: NMVQAPQLGLESEGP*YFKWEFDISISQFF
Trigger: AAAGAATTGAGAGATACTGATATCAAACTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTTGGACCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR GCA 90 bp TATTTGCCTCCACAGTTAACACAGAGTGCCAAATTCTGGGATGTGTATTACTTAAGTGGTCTCCAGACTTaGAAGTTACCGGCTAATGCG +
Preference number: 2 (lower is better)
Translates to: YLPPQLTQSAKFWDVYYLSGLQT*KLPANA
Trigger: CGCATTAGCCGGTAACTTGCAAGTCTGGAGACCACT...TAAGTAATACACATCCCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CCA 90 bp AAGGCTTCATTTCTACCTCGAAAATGTCTATCTGTGGCAGTAGGAGAAATGACAACAAAGACTGGTAGATaGGGCGAAAGTGCAGAAAGC +
Preference number: 2 (lower is better)
Translates to: KASFLPRKCLSVAVGEMTTKTGR*GESAES
Trigger: GCTTTCTGCACTTTCGCCCCATCTACCAGTCTTTGT...TGTCATTTCTCCTACTGCCACAGATAGACATTTTCGAGGTAGAAATGAAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR TCA 90 bp TATTTGCCTCCACAGTTAACACAGAGTGCCAAATTCTGGGATGTGTATTACTTAGCTACAGCAAATCCCTaGAGCTTTCAGTTTTGCCTC +
Preference number: 2 (lower is better)
Translates to: YLPPQLTQSAKFWDVYYLATANP*SFQFCL
Trigger: GAGGCAAAACTGAAAGCTTCAGGGATTTGCTGTAGC...TAAGTAATACACATCCCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR GCA 90 bp TATTTGCCTCCACAGTTAACACAGAGTGCCAAATTCTGGGATGTGTATTACTTATCAGTTTTGCCTCTGTaGTCAAAGAAGGCCCTCCAT +
Preference number: 2 (lower is better)
Translates to: YLPPQLTQSAKFWDVYYLSVLPL*SKKALH
Trigger: ATGGAGGGCCTTCTTTGAGCACAGAGGCAAAACTGA...TAAGTAATACACATCCCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CCA 90 bp AAAAGGGAGGTTATATATGGATCTGTGCACCAAGGGTTCAAGAAGAACTTGAAGTCAACATACCACCATTaGCTTTTGGCAGAAGGCAAC +
Preference number: 2 (lower is better)
Translates to: KREVIYGSVHQGFKKNLKSTYHH*LLAEGN
Trigger: GTTGCCTTCTGCCAAAAGCCAATGGTGGTATGTTGA...CTTCAAGTTCTTCTTGAACCCTTGGTGCACAGATCCATATATAACCTCCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR GCA 90 bp GATTTGACCGGAATCCACGTGATCTCTTTTCCCAGGAGAACTGTCACTCCATTTCACATAAACTTAGCATaGTGTATTTACTGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: DLTGIHVISFPRRTVTPFHINLA*CIYWQS
Trigger: ACTTTGCCAGTAAATACAGCATGCTAAGTTTATGTG...AAATGGAGTGACAGTTCTCCTGGGAAAAGAGATCACGTGGATTCCGGTCAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CCA 90 bp TATTTGCCTCCACAGTTAACACAGAGTGCCAAATTCTGGGATGTGTATTACTTAACCACCATTGGCTTTTaGCAGAAGGCAACTTCTTTC +
Preference number: 2 (lower is better)
Translates to: YLPPQLTQSAKFWDVYYLTTIGF*QKATSF
Trigger: GAAAGAAGTTGCCTTCTGCCAAAAGCCAATGGTGGT...TAAGTAATACACATCCCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CCA 90 bp CCAAGAGTAGTCAAATTCACAGAGACAGAAAGTATGGTGCTTGTCATGGCTGAATCAGTGATAAGCCCATaGATGATGGTATTCTTTCCA +
Preference number: 2 (lower is better)
Translates to: PRVVKFTETESMVLVMAESVISP*MMVFFP
Trigger: TGGAAAGAATACCATCATCCATGGGCTTATCACTGA...TTCAGCCATGACAAGCACCATACTTTCTGTCTCTGTGAATTTGACTACTCTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
3UTR-3UTR TCA 90 bp TATTTGCCTCCACAGTTAACACAGAGTGCCAAATTCTGGGATGTGTATTACTTATTCTCAGTAAAGGGATaGCGTATCATAGTGGTTCTC +
Preference number: 2 (lower is better)
Translates to: YLPPQLTQSAKFWDVYYLFSVKG*RIIVVL
Trigger: GAGAACCACTATGATACGTCATCCCTTTACTGAGAA...TAAGTAATACACATCCCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR GCA 90 bp TATTTGCCTCCACAGTTAACACAGAGTGCCAAATTCTGGGATGTGTATTACTTAATCCATTTACTGGTGTaGAACCATCCTAGACTAGCT +
Preference number: 2 (lower is better)
Translates to: YLPPQLTQSAKFWDVYYLIHLLV*NHPRLA
Trigger: AGCTAGTCTAGGATGGTTGCACACCAGTAAATGGAT...TAAGTAATACACATCCCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CCA 90 bp AAAAGGGAGGTTATATATGGATCTGTGCACCAAGGGTTCAAGAAGAACTTGAAGCCTATGGCTGTTATTTaGTTCAATGGCAGAATAAGG +
Preference number: 2 (lower is better)
Translates to: KREVIYGSVHQGFKKNLKPMAVI*FNGRIR
Trigger: CCTTATTCTGCCATTGAACCAAATAACAGCCATAGG...CTTCAAGTTCTTCTTGAACCCTTGGTGCACAGATCCATATATAACCTCCCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR TCA 90 bp AAAAGGGAGGTTATATATGGATCTGTGCACCAAGGGTTCAAGAAGAACTTGAAGAGAAGAAATAATAAATaGGTTACTGAAAGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: KREVIYGSVHQGFKKNLKRRNNK*VTERQP
Trigger: GGGCTGCCTTTCAGTAACTCATTTATTATTTCTTCT...CTTCAAGTTCTTCTTGAACCCTTGGTGCACAGATCCATATATAACCTCCCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CCA 90 bp TATTTGCCTCCACAGTTAACACAGAGTGCCAAATTCTGGGATGTGTATTACTTATGTTATTTGGTTCAATaGCAGAATAAGGCGACGCTT +
Preference number: 2 (lower is better)
Translates to: YLPPQLTQSAKFWDVYYLCYLVQ*QNKATL
Trigger: AAGCGTCGCCTTATTCTGCCATTGAACCAAATAACA...TAAGTAATACACATCCCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CAA 90 bp TGTTGTAGTGCATTCAGCTCACCACAGATTAAAACTAAATTTTATTaGCCTCCACAGTTAACACAGAGTGCCAAATTCTGGGATGTGTAT +
Preference number: 2 (lower is better)
Translates to: CCSAFSSPQIKTKFY*PPQLTQSAKFWDVY
Trigger: ATACACATCCCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATAAAATTTAGTTTTAATCTGTGGTGAGCTGAATGCACTACAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR TCA 90 bp TATTTGCCTCCACAGTTAACACAGAGTGCCAAATTCTGGGATGTGTATTACTTAAGAAAAGCTAAAAATTaGGCAGGAAAGTATTGCCAG +
Preference number: 2 (lower is better)
Translates to: YLPPQLTQSAKFWDVYYLRKAKN*AGKYCQ
Trigger: CTGGCAATACTTTCCTGCTCAATTTTTAGCTTTTCT...TAAGTAATACACATCCCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CCA 90 bp TATTTGCCTCCACAGTTAACACAGAGTGCCAAATTCTGGGATGTGTATTACTTATTATTCCAGTTAGCTTaGTGTCAATGTTTTGCCTAT +
Preference number: 2 (lower is better)
Translates to: YLPPQLTQSAKFWDVYYLLFQLA*CQCFAY
Trigger: ATAGGCAAAACATTGACACCAAGCTAACTGGAATAA...TAAGTAATACACATCCCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CCA 72 bp TCCACCAGACTGGCGAGTGCTAGGCCATTCACAACATaGTCCAAGCTCCCCAACTGGGCCTTGAATCAGAAG +
Preference number: 3 (lower is better)
Translates to: STRLASARPFTT*SKLPNWALNQK
Trigger: CTTCTGATTCAAGGCCCAGTTGGGGAGCTTGGACCATGTTGTGAATGGCCTAGCACTCGCCAGTCTGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 72 bp GACAGCATCGAAGGCAGCCAGTTGCCGCAGATGTACTaGGCAGATGAGAGTGGTACTGCTTTGAGAACCCAC +
Preference number: 3 (lower is better)
Translates to: DSIEGSQLPQMY*ADESGTALRTH
Trigger: GTGGGTTCTCAAAGCAGTACCACTCTCATCTGCTCAGTACATCTGCGGCAACTGGCTGCCTTCGATGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 72 bp AAAAACGAGAGCGGTGGCTACACACTGATGGGGCTGTaGTGTGCTGGGCTGAACGCAATGACAGCATCGAAG +
Preference number: 3 (lower is better)
Translates to: KNESGGYTLMGL*CAGLNAMTASK
Trigger: CTTCGATGCTGTCATTGCGTTCAGCCCAGCACATCACAGCCCCATCAGTGTGTAGCCACCGCTCTCGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CAA 90 bp AAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGTCATCACATCCCTTGCTaGATGGGCTGTGCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: KLPNWALNQKGPCISNGSHHIPC*MGCAPR
Trigger: CCTGGGAGCACAGCCCATCAAGCAAGGGATGTGATG...ACTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 72 bp CGAAGGCAGCCAGTTGCCGCAGATGTACTGAGCAGATaGGAGTGGTACTGCTTTGAGAACCCACCAAAATCT +
Preference number: 3 (lower is better)
Translates to: RRQPVAADVLSR*EWYCFENPPKS
Trigger: AGATTTTGGTGGGTTCTCAAAGCAGTACCACTCTCATCTGCTCAGTACATCTGCGGCAACTGGCTGCCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CAA 90 bp GATTTGACCGGAATCCACGTGATCTCTTTTCCCAGGAGAACTGTCACTCCATTTACACCATCACATCCCTaGCTTGATGGGCTGTGCTCC +
Preference number: 3 (lower is better)
Translates to: DLTGIHVISFPRRTVTPFTPSHP*LDGLCS
Trigger: GGAGCACAGCCCATCAAGCAAGGGATGTGATGGTGT...AAATGGAGTGACAGTTCTCCTGGGAAAAGAGATCACGTGGATTCCGGTCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CCA 72 bp GCTAGGCCATTCACAACATGGTCCAAGCTCCCCAACTaGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAAT +
Preference number: 3 (lower is better)
Translates to: ARPFTTWSKLPN*ALNQKGPCISN
Trigger: ATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTTGGACCATGTTGTGAATGGCCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 72 bp CATTCACAACATGGTCCAAGCTCCCCAACTGGGCCTTaGATCAGAAGGGCCCTTGTATTTCAAATGGGAGTT +
Preference number: 3 (lower is better)
Translates to: HSQHGPSSPTGP*IRRALVFQMGV
Trigger: AACTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTTGGACCATGTTGTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CAA 90 bp CAAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGAAGAAATATGTACAATaGCTAAAGGGACCGTCCTGG +
Preference number: 3 (lower is better)
Translates to: QAPQLGLESEGPLYFKWEKKYVQ*LKGPSW
Trigger: CCAGGACGGTCCCTTTAGCAATTGTACATATTTCTT...CTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CAA 90 bp AAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGTTCCTGTGGCCTAAAGTaGTACCTAGTAGTTGGAGAT +
Preference number: 3 (lower is better)
Translates to: KLPNWALNQKGPCISNGSSCGLK*YLVVGD
Trigger: ATCTCCAACTACTAGGTACAACTTTAGGCCACAGGA...ACTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CAA 90 bp AGAACTCAAGGAACTCTATCTAGCAAAACCGTAAATGGGGAGCGCAGGTTAGGTAGAGCAAATCCTCAGTaGACCAGACAATGCCATCTG +
Preference number: 3 (lower is better)
Translates to: RTQGTLSSKTVNGERRLGRANPQ*TRQCHL
Trigger: CAGATGGCATTGTCTGGTCAACTGAGGATTTGCTCT...ACCTAACCTGCGCTCCCCATTTACGGTTTTGCTAGATAGAGTTCCTTGAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563525.2
3UTR-3UTR CAA 90 bp CAAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGAGTAACAGCTACTTTTaGTGTTCGTTTGTGATAGGT +
Preference number: 3 (lower is better)
Translates to: QAPQLGLESEGPLYFKWESNSYF*CSFVIG
Trigger: ACCTATCACAAACGAACACAAAAAGTAGCTGTTACT...CTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CCA 72 bp GATCACACAACGCTTCAACATACCACCATTGGCTTTTaGCAGAAGGCAACTTCTTTCCTCTCCAAGCTACAA +
Preference number: 3 (lower is better)
Translates to: DHTTLQHTTIGF*QKATSFLSKLQ
Trigger: TTGTAGCTTGGAGAGGAAAGAAGTTGCCTTCTGCCAAAAGCCAATGGTGGTATGTTGAAGCGTTGTGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CCA 72 bp TTTGTAAGAAATGCAATTTGCACTGACACGGCCAGATaGAACACACTCCAAAACCTGCTTGTGAGTTCTGGG +
Preference number: 3 (lower is better)
Translates to: FVRNAICTDTAR*NTLQNLLVSSG
Trigger: CCCAGAACTCACAAGCAGGTTTTGGAGTGTGTTCCATCTGGCCGTGTCAGTGCAAATTGCATTTCTTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CAA 90 bp TATTTGCCTCCACAGTTAACACAGAGTGCCAAATTCTGGGATGTGTATTACTTACAAGCCTTAGCCGATTaGACCGGAATCCACGTGATC +
Preference number: 3 (lower is better)
Translates to: YLPPQLTQSAKFWDVYYLQALAD*TGIHVI
Trigger: GATCACGTGGATTCCGGTCAAATCGGCTAAGGCTTG...TAAGTAATACACATCCCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 72 bp GTTTTGGTGCACATGTCACCACAGATAGGAAGGTGGTaGAAGGCTTCATTTCTACCTCGAAAATGTCTATCT +
Preference number: 3 (lower is better)
Translates to: VLVHMSPQIGRW*KASFLPRKCLS
Trigger: AGATAGACATTTTCGAGGTAGAAATGAAGCCTTTCACCACCTTCCTATCTGTGGTGACATGTGCACCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR GCA 72 bp TTTTTGGTGAGGTTCTCCTTTGTAAGAAATGCAATTTaGACTGACACGGCCAGATGGAACACACTCCAAAAC +
Preference number: 3 (lower is better)
Translates to: FLVRFSFVRNAI*TDTARWNTLQN
Trigger: GTTTTGGAGTGTGTTCCATCTGGCCGTGTCAGTGCAAATTGCATTTCTTACAAAGGAGAACCTCACCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CAA 90 bp AAAAGGGAGGTTATATATGGATCTGTGCACCAAGGGTTCAAGAAGAACTTGAAGTACCACCATTGGCTTTaGGCAGAAGGCAACTTCTTT +
Preference number: 3 (lower is better)
Translates to: KREVIYGSVHQGFKKNLKYHHWL*AEGNFF
Trigger: AAAGAAGTTGCCTTCTGCCAAAAGCCAATGGTGGTA...CTTCAAGTTCTTCTTGAACCCTTGGTGCACAGATCCATATATAACCTCCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 72 bp CGAGAAAATACAAAACGGATGGGAAATGGTCTAAGATaGCTGGAGCCTAACGGTTTGAGTTTCCACATTATC +
Preference number: 3 (lower is better)
Translates to: RENTKRMGNGLR*LEPNGLSFHII
Trigger: GATAATGTGGAAACTCAAACCGTTAGGCTCCAGTCATCTTAGACCATTTCCCATCCGTTTTGTATTTTCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 72 bp ATGTCAATGAGGCTTAAATTCAATTTTAACCAGTGGTaGGAGGCACAGTTGGTGAGCAGACCTCTATGGAAT +
Preference number: 3 (lower is better)
Translates to: MSMRLKFNFNQW*EAQLVSRPLWN
Trigger: ATTCCATAGAGGTCTGCTCACCAACTGTGCCTCTCACCACTGGTTAAAATTGAATTTAAGCCTCATTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 72 bp CGGTGCATGAGTAATACCAAAGCACTTTGTGTACAGTaGTGTGACATGCAGCTTTCAAGACAACTACAGAAA +
Preference number: 3 (lower is better)
Translates to: RCMSNTKALCVQ*CDMQLSRQLQK
Trigger: TTTCTGTAGTTGTCTTGAAAGCTGCATGTCACATCACTGTACACAAAGTGCTTTGGTATTACTCATGCACCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CCA 72 bp AGTGTTAAAATATTGCCCTTTACAAAGACTGGTAGATaGGGCGAAAGTGCAGAAAGCAAGAGTTTTTCCCTC +
Preference number: 3 (lower is better)
Translates to: SVKILPFTKTGR*GESAESKSFSL
Trigger: GAGGGAAAAACTCTTGCTTTCTGCACTTTCGCCCCATCTACCAGTCTTTGTAAAGGGCAATATTTTAACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CCA 72 bp CTCCAACTTCGGAAATACTGTAACTGCTTTTGCATTTaGTATGACACCACACCGTTTATAATAGCACCTAGG +
Preference number: 3 (lower is better)
Translates to: LQLRKYCNCFCI*YDTTPFIIAPR
Trigger: CCTAGGTGCTATTATAAACGGTGTGGTGTCATACCAAATGCAAAAGCAGTTACAGTATTTCCGAAGTTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CAA 90 bp TATTTGCCTCCACAGTTAACACAGAGTGCCAAATTCTGGGATGTGTATTACTTACTGAAGCTTTCAGTTTaGCCTCTGTGCTCAAAGAAG +
Preference number: 3 (lower is better)
Translates to: YLPPQLTQSAKFWDVYYLLKLSV*PLCSKK
Trigger: CTTCTTTGAGCACAGAGGCAAAACTGAAAGCTTCAG...TAAGTAATACACATCCCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CAA 90 bp TATTTGCCTCCACAGTTAACACAGAGTGCCAAATTCTGGGATGTGTATTACTTAGCCTATGGCTGTTATTaGGTTCAATGGCAGAATAAG +
Preference number: 3 (lower is better)
Translates to: YLPPQLTQSAKFWDVYYLAYGCY*VQWQNK
Trigger: CTTATTCTGCCATTGAACCAAATAACAGCCATAGGC...TAAGTAATACACATCCCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CAA 90 bp TATTTGCCTCCACAGTTAACACAGAGTGCCAAATTCTGGGATGTGTATTACTTATTGAGCAGGAAAGTATaGCCAGGAGACCTTGAAAAA +
Preference number: 3 (lower is better)
Translates to: YLPPQLTQSAKFWDVYYLLSRKV*PGDLEK
Trigger: TTTTTCAAGGTCTCCTGGCAATACTTTCCTGCTCAA...TAAGTAATACACATCCCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR-3UTR CAA 90 bp TATTTGCCTCCACAGTTAACACAGAGTGCCAAATTCTGGGATGTGTATTACTTAGTGATAGGTACTGGTTaGTCAGCAAAGTTTGCCTTT +
Preference number: 3 (lower is better)
Translates to: YLPPQLTQSAKFWDVYYLVIGTG*SAKFAF
Trigger: AAAGGCAAACTTTGCTGACAAACCAGTACCTATCAC...TAAGTAATACACATCCCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 72 bp AATGAAAACGACACAGAAATCACTATCCACGGTGCATaGGTAATACCAAAGCACTTTGTGTACAGTGATGTG +
Preference number: 3 (lower is better)
Translates to: NENDTEITIHGA*VIPKHFVYSDV
Trigger: CACATCACTGTACACAAAGTGCTTTGGTATTACTCATGCACCGTGGATAGTGATTTCTGTGTCGTTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CCA 72 bp AGAAAGAAATATGTACAATTGCTAAAGGGACCGTCCTaGGTATCGTCTACAATTATTCCAGTTAGCTTGGTG +
Preference number: 3 (lower is better)
Translates to: RKKYVQLLKGPS*VSSTIIPVSLV
Trigger: CACCAAGCTAACTGGAATAATTGTAGACGATACCCAGGACGGTCCCTTTAGCAATTGTACATATTTCTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CCA 72 bp TTCACACACAGCAATACTGAAAAGGGAGGTTATATATaGATCTGTGCACCAAGGGTTCAAGAAGAACTTGAA +
Preference number: 3 (lower is better)
Translates to: FTHSNTEKGGYI*ICAPRVQEELE
Trigger: TTCAAGTTCTTCTTGAACCCTTGGTGCACAGATCCATATATAACCTCCCTTTTCAGTATTGCTGTGTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 72 bp GCACATAAACTTAGCATGCTGTATTTACTGGCAAAGTaGCAAATGCTATTCAGAGAGAATCAAGACCTTCAC +
Preference number: 3 (lower is better)
Translates to: AHKLSMLYLLAK*QMLFRENQDLH
Trigger: GTGAAGGTCTTGATTCTCTCTGAATAGCATTTGTCACTTTGCCAGTAAATACAGCATGCTAAGTTTATGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 72 bp AAACAATCACTTCGGCTGTTCAGTAATTTGTCCGAATaGAATGTAACGTCTGATGCCCCTCTATGTGAAATA +
Preference number: 3 (lower is better)
Translates to: KQSLRLFSNLSE*NVTSDAPLCEI
Trigger: TATTTCACATAGAGGGGCATCAGACGTTACATTTCATTCGGACAAATTACTGAACAGCCGAAGTGATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR GCA 72 bp AGGAATCTGTCAAAGGTGTTAACTGCTCTACTACAGTaGAAAATTCCAAGAGCCTTAGCTAGTAATTTCAGA +
Preference number: 3 (lower is better)
Translates to: RNLSKVLTALLQ*KIPRALASNFR
Trigger: TCTGAAATTACTAGCTAAGGCTCTTGGAATTTTGCACTGTAGTAGAGCAGTTAACACCTTTGACAGATTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR GCA 72 bp AGAGAACTCCAACTTCGGAAATACTGTAACTGCTTTTaGATTTGGTATGACACCACACCGTTTATAATAGCA +
Preference number: 3 (lower is better)
Translates to: RELQLRKYCNCF*IWYDTTPFIIA
Trigger: TGCTATTATAAACGGTGTGGTGTCATACCAAATGCAAAAGCAGTTACAGTATTTCCGAAGTTGGAGTTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR GCA 72 bp GTAATACCAAAGCACTTTGTGTACAGTGATGTGACATaGAGCTTTCAAGACAACTACAGAAATTCCAGTGTA +
Preference number: 3 (lower is better)
Translates to: VIPKHFVYSDVT*SFQDNYRNSSV
Trigger: TACACTGGAATTTCTGTAGTTGTCTTGAAAGCTGCATGTCACATCACTGTACACAAAGTGCTTTGGTATTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR GCA 72 bp CTTCTAAGTCACTTTAAAGACACTATAAAAGTGTCATaGACTTGTATCCCAGCTACTCTGGAGAATAAGGCA +
Preference number: 3 (lower is better)
Translates to: LLSHFKDTIKVS*TCIPATLENKA
Trigger: TGCCTTATTCTCCAGAGTAGCTGGGATACAAGTGCATGACACTTTTATAGTGTCTTTAAAGTGACTTAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
3UTR-3UTR CAA 90 bp TATTTGCCTCCACAGTTAACACAGAGTGCCAAATTCTGGGATGTGTATTACTTAGTTTGTCAGCAAAGTTaGCCTTTCTCAACTACAAAT +
Preference number: 3 (lower is better)
Translates to: YLPPQLTQSAKFWDVYYLVCQQS*PFSTTN
Trigger: ATTTGTAGTTGAGAAAGGCAAACTTTGCTGACAAAC...TAAGTAATACACATCCCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR TCA 72 bp ACAAAGTTCCACGCACCTCCAGAATACGTGTTTTATTaGAACTGTGCTTATGACTTGCATACTATTTCAAAA +
Preference number: 3 (lower is better)
Translates to: TKFHAPPEYVFY*NCAYDLHTISK
Trigger: TTTTGAAATAGTATGCAAGTCATAAGCACAGTTTCAATAAAACACGTATTCTGGAGGTGCGTGGAACTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
CDS-3UTR GCA 90 bp GTGTCATGCACTTGTATCCCAGCTACTCTGGAGAATAAGGCAGGAGACTTGCTTCTTCCCTGCTGCAGCTaGTTACAGTGTGGGCAACGC +
Preference number: 4 (lower is better)
Translates to: VSCTCIPATLENKAGDLLLPCCS*LQCGQR
Trigger: GCGTTGCCCACACTGTAAGCAGCTGCAGCAGGGAAG...AAGCAAGTCTCCTGCCTTATTCTCCAGAGTAGCTGGGATACAAGTGCATGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR CCA 90 bp GTGTCATGCACTTGTATCCCAGCTACTCTGGAGAATAAGGCAGGAGACTTGCTTCGGGGACCAATGCGATaGCAAACTCCAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VSCTCIPATLENKAGDLLRGPMR*QTPAAL
Trigger: CAGAGCAGCTGGAGTTTGCCATCGCATTGGTCCCCG...AAGCAAGTCTCCTGCCTTATTCTCCAGAGTAGCTGGGATACAAGTGCATGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR TCA 90 bp CAAAGAGCAAATCCTCAGTTGACCAGACAATGCCATCTGCACATACCACTCCCCTGCATGGTGCCATGGTaGTTGCACACAGCATACAGG +
Preference number: 4 (lower is better)
Translates to: QRANPQLTRQCHLHIPLPCMVPW*LHTAYR
Trigger: CCTGTATGCTGTGTGCAATCACCATGGCACCATGCA...GGGGAGTGGTATGTGCAGATGGCATTGTCTGGTCAACTGAGGATTTGCTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR CCA 90 bp CAAAGAGCAAATCCTCAGTTGACCAGACAATGCCATCTGCACATACCACTCCCCTGCCCTTTCTACTATTaGGTGGCACAAGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QRANPQLTRQCHLHIPLPCPFYY*VAQGLL
Trigger: GAGCAGCCCTTGTGCCACCCAATAGTAGAAAGGGCA...GGGGAGTGGTATGTGCAGATGGCATTGTCTGGTCAACTGAGGATTTGCTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR TCA 90 bp AGAACTCAAGGAACTCTATCTAGCAAAACCGTAAATGGGGAGCGCAGGTTAGGTGGCAGGAGACTTGCTTaGGCCCAGAAGTTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: RTQGTLSSKTVNGERRLGGRRLA*AQKFKA
Trigger: AGCCTTGAACTTCTGGGCTCAAGCAAGTCTCCTGCC...ACCTAACCTGCGCTCCCCATTTACGGTTTTGCTAGATAGAGTTCCTTGAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR GCA 90 bp GGTAAACAAAGAGCAAATCCTCAGTTGACCAGACAATGCCATCTGCACATACCACTCCACGGGGACCAATaGGATGGCAAACTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GKQRANPQLTRQCHLHIPLHGDQ*DGKLQL
Trigger: CAGCTGGAGTTTGCCATCGCATTGGTCCCCGTGGAG...TGGTATGTGCAGATGGCATTGTCTGGTCAACTGAGGATTTGCTCTTTGTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR GCA 90 bp CAAAGAGCAAATCCTCAGTTGACCAGACAATGCCATCTGCACATACCACTCCCCAAAGTCAAGTCACCCTaGCACAAGCAAACCCGTCTG +
Preference number: 4 (lower is better)
Translates to: QRANPQLTRQCHLHIPLPKVKSP*HKQTRL
Trigger: CAGACGGGTTTGCTTGTGGCAGGGTGACTTGACTTT...GGGGAGTGGTATGTGCAGATGGCATTGTCTGGTCAACTGAGGATTTGCTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR GCA 90 bp GTGTCATGCACTTGTATCCCAGCTACTCTGGAGAATAAGGCAGGAGACTTGCTTCCAGAGGATGGAAACTaGCCTCACAGTTGGCACACT +
Preference number: 4 (lower is better)
Translates to: VSCTCIPATLENKAGDLLPEDGN*PHSWHT
Trigger: AGTGTGCCAACTGTGAGGGCAGTTTCCATCCTCTGG...AAGCAAGTCTCCTGCCTTATTCTCCAGAGTAGCTGGGATACAAGTGCATGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR GCA 90 bp CAAAGAGCAAATCCTCAGTTGACCAGACAATGCCATCTGCACATACCACTCCCCCCAGACAATGCCATCTaGACATACCACTCCCCAATC +
Preference number: 4 (lower is better)
Translates to: QRANPQLTRQCHLHIPLPPDNAI*TYHSPI
Trigger: GATTGGGGAGTGGTATGTGCAGATGGCATTGTCTGG...GGGGAGTGGTATGTGCAGATGGCATTGTCTGGTCAACTGAGGATTTGCTCTTTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR CCA 90 bp GTTACCAGTGGTTATCTCAGTGATAAGCCCATGGATGATGGTATTCTTTCCACCAACTGCCCTCACAGTTaGCACACTGCCTACCGGAGG +
Preference number: 4 (lower is better)
Translates to: VTSGYLSDKPMDDGILSTNCPHS*HTAYRR
Trigger: CCTCCGGTAGGCAGTGTGCCAACTGTGAGGGCAGTT...GGTGGAAAGAATACCATCATCCATGGGCTTATCACTGAGATAACCACTGGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
3UTR CAA 72 bp CAGACTTGCTCAAGAGAACCACAAGCCTTAGCCGATTaGACCGGAATCCACGTGATCTCTTTTCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: QTCSREPQALAD*TGIHVISFPRR
Trigger: TCTCCTGGGAAAAGAGATCACGTGGATTCCGGTCAAATCGGCTAAGGCTTGTGGTTCTCTTGAGCAAGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CAA 72 bp CCATTCACAACATGGTCCAAGCTCCCCAACTGGGCCTaGAATCAGAAGGGCCCTTGTATTTCAAATGGGAGT +
Preference number: 4 (lower is better)
Translates to: PFTTWSKLPNWA*NQKGPCISNGS
Trigger: ACTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTTGGACCATGTTGTGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CAA 72 bp GAGCGCAGGTTAGGTAAACAAAGAGCAAATCCTCAGTaGACCAGACAATGCCATCTGCACATACCACTCCCC +
Preference number: 4 (lower is better)
Translates to: ERRLGKQRANPQ*TRQCHLHIPLP
Trigger: GGGGAGTGGTATGTGCAGATGGCATTGTCTGGTCAACTGAGGATTTGCTCTTTGTTTACCTAACCTGCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR TCA 90 bp AGAGAAGATAGAACTCAAGGAACTCTATCTAGCAAAACCGTAAATGGGGAGCGCCTCCTCTTAACCACGTaGGGTGTCATGTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: REDRTQGTLSSKTVNGERLLLTT*GVMSRP
Trigger: TGGCCTGGACATGACACCTCACGTGGTTAAGAGGAG...GCGCTCCCCATTTACGGTTTTGCTAGATAGAGTTCCTTGAGTTCTATCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR TCA 90 bp AGAGAAGATAGAACTCAAGGAACTCTATCTAGCAAAACCGTAAATGGGGAGCGCACAAGCAAACCCGTCTaGAGGACTCGCCAGCACAGA +
Preference number: 4 (lower is better)
Translates to: REDRTQGTLSSKTVNGERTSKPV*RTRQHR
Trigger: TCTGTGCTGGCGAGTCCTTCAGACGGGTTTGCTTGT...GCGCTCCCCATTTACGGTTTTGCTAGATAGAGTTCCTTGAGTTCTATCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR GCA 90 bp CAAAGAGCAAATCCTCAGTTGACCAGACAATGCCATCTGCACATACCACTCCCCAACGTAATGCTTCCCTaGTGCAGCTGCTTACAGTGT +
Preference number: 4 (lower is better)
Translates to: QRANPQLTRQCHLHIPLPNVMLP*CSCLQC
Trigger: ACACTGTAAGCAGCTGCAGCAGGGAAGCATTACGTT...GGGGAGTGGTATGTGCAGATGGCATTGTCTGGTCAACTGAGGATTTGCTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR CCA 90 bp GTTACCAGTGGTTATCTCAGTGATAAGCCCATGGATGATGGTATTCTTTCCACCCAGCTGCTTACAGTGTaGGCAACGCCAGGCATCATC +
Preference number: 4 (lower is better)
Translates to: VTSGYLSDKPMDDGILSTQLLTV*ATPGII
Trigger: GATGATGCCTGGCGTTGCCCACACTGTAAGCAGCTG...GGTGGAAAGAATACCATCATCCATGGGCTTATCACTGAGATAACCACTGGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR TCA 90 bp AGAACTCAAGGAACTCTATCTAGCAAAACCGTAAATGGGGAGCGCAGGTTAGGTGGTGCTTGTCATGGCTaGAGGGAGAGAAAATGGGAA +
Preference number: 4 (lower is better)
Translates to: RTQGTLSSKTVNGERRLGGACHG*RERKWE
Trigger: TTCCCATTTTCTCTCCCTTCAGCCATGACAAGCACC...ACCTAACCTGCGCTCCCCATTTACGGTTTTGCTAGATAGAGTTCCTTGAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR GCA 90 bp GTGTCATGCACTTGTATCCCAGCTACTCTGGAGAATAAGGCAGGAGACTTGCTTCGCCTGTCTCCTTCCTaGCGAAATCTCTTTAGATGT +
Preference number: 4 (lower is better)
Translates to: VSCTCIPATLENKAGDLLRLSPS*RNLFRC
Trigger: ACATCTAAAGAGATTTCGGCAGGAAGGAGACAGGCG...AAGCAAGTCTCCTGCCTTATTCTCCAGAGTAGCTGGGATACAAGTGCATGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR TCA 90 bp GGTAAACAAAGAGCAAATCCTCAGTTGACCAGACAATGCCATCTGCACATACCACTACCGGAGGGGAAATaGGGCTCTAAAGTCAAGTCA +
Preference number: 4 (lower is better)
Translates to: GKQRANPQLTRQCHLHIPLPEGK*GSKVKS
Trigger: TGACTTGACTTTAGAGCCTCATTTCCCCTCCGGTAG...TGGTATGTGCAGATGGCATTGTCTGGTCAACTGAGGATTTGCTCTTTGTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR TCA 90 bp AGAGAAGATAGAACTCAAGGAACTCTATCTAGCAAAACCGTAAATGGGGAGCGCGAGCAAATCCTCAGTTaGCCAGACAATGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: REDRTQGTLSSKTVNGEREQILS*PDNAIC
Trigger: GCAGATGGCATTGTCTGGTCAACTGAGGATTTGCTC...GCGCTCCCCATTTACGGTTTTGCTAGATAGAGTTCCTTGAGTTCTATCTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR GCA 90 bp GTTACCAGTGGTTATCTCAGTGATAAGCCCATGGATGATGGTATTCTTTCCACCTGTTCTGAAGTTTCATaGGCCTGTCTCCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: VTSGYLSDKPMDDGILSTCSEVS*ACLLPA
Trigger: GGCAGGAAGGAGACAGGCGCATGAAACTTCAGAACA...GGTGGAAAGAATACCATCATCCATGGGCTTATCACTGAGATAACCACTGGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR GCA 90 bp GTGTCATGCACTTGTATCCCAGCTACTCTGGAGAATAAGGCAGGAGACTTGCTTAGACAGAAAGTATGGTaGTTGTCATGGCTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: VSCTCIPATLENKAGDLLRQKVW*LSWLKG
Trigger: TCCCTTCAGCCATGACAAGCACCATACTTTCTGTCT...AAGCAAGTCTCCTGCCTTATTCTCCAGAGTAGCTGGGATACAAGTGCATGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR CCA 90 bp GTTACCAGTGGTTATCTCAGTGATAAGCCCATGGATGATGGTATTCTTTCCACCCAGAGATCCAGAGGATaGAAACTGCCCTCACAGTTG +
Preference number: 4 (lower is better)
Translates to: VTSGYLSDKPMDDGILSTQRSRG*KLPSQL
Trigger: CAACTGTGAGGGCAGTTTCCATCCTCTGGATCTCTG...GGTGGAAAGAATACCATCATCCATGGGCTTATCACTGAGATAACCACTGGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR CCA 90 bp GTTACCAGTGGTTATCTCAGTGATAAGCCCATGGATGATGGTATTCTTTCCACCCAGTCAGCTACCTACTaGACGACCCAACTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: VTSGYLSDKPMDDGILSTQSATY*TTQLRK
Trigger: TTTCCTGAGTTGGGTCGTCCAGTAGGTAGCTGACTG...GGTGGAAAGAATACCATCATCCATGGGCTTATCACTGAGATAACCACTGGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR TCA 90 bp GTTACCAGTGGTTATCTCAGTGATAAGCCCATGGATGATGGTATTCTTTCCACCACTACTAATTTCACATaGGCAGTGCCACCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: VTSGYLSDKPMDDGILSTTTNFT*AVPPGP
Trigger: TGGACCAGGTGGCACTGCTCATGTGAAATTAGTAGT...GGTGGAAAGAATACCATCATCCATGGGCTTATCACTGAGATAACCACTGGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR GCA 90 bp GTTACCAGTGGTTATCTCAGTGATAAGCCCATGGATGATGGTATTCTTTCCACCTGGTGCCATGGTGATTaGACACAGCATACAGGTCAT +
Preference number: 4 (lower is better)
Translates to: VTSGYLSDKPMDDGILSTWCHGD*TQHTGH
Trigger: ATGACCTGTATGCTGTGTGCAATCACCATGGCACCA...GGTGGAAAGAATACCATCATCCATGGGCTTATCACTGAGATAACCACTGGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR CCA 90 bp CAAAGAGCAAATCCTCAGTTGACCAGACAATGCCATCTGCACATACCACTCCCCTCTTTGGTGTACAGTTaGAAACACTGGGATAAAGTG +
Preference number: 4 (lower is better)
Translates to: QRANPQLTRQCHLHIPLPSLVYS*KHWDKV
Trigger: CACTTTATCCCAGTGTTTCCAACTGTACACCAAAGA...GGGGAGTGGTATGTGCAGATGGCATTGTCTGGTCAACTGAGGATTTGCTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR CCA 90 bp GTTACCAGTGGTTATCTCAGTGATAAGCCCATGGATGATGGTATTCTTTCCACCCAAGCCGCTCCTCTTTaGTGTACAGTTGGAAACACT +
Preference number: 4 (lower is better)
Translates to: VTSGYLSDKPMDDGILSTQAAPL*CTVGNT
Trigger: AGTGTTTCCAACTGTACACCAAAGAGGAGCGGCTTG...GGTGGAAAGAATACCATCATCCATGGGCTTATCACTGAGATAACCACTGGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
3UTR CAA 72 bp CAAGCTCCCCAACTGGGCCTTGAATCAGAAGGGCCCTaGTATTTCAAATGGGAGTTTGATATCAGTATCTCT +
Preference number: 4 (lower is better)
Translates to: QAPQLGLESEGP*YFKWEFDISIS
Trigger: AGAGATACTGATATCAAACTCCCATTTGAAATACAAGGGCCCTTCTGATTCAAGGCCCAGTTGGGGAGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
CDS-3UTR GCA 90 bp AGAGAAGATAGAACTCAAGGAACTCTATCTAGCAAAACCGTAAATGGGGAGCGCATTTCACATGAGCAGTaGCACCTGGTCCACAAGATT +
Preference number: 4 (lower is better)
Translates to: REDRTQGTLSSKTVNGERISHEQ*HLVHKI
Trigger: AATCTTGTGGACCAGGTGGCACTGCTCATGTGAAAT...GCGCTCCCCATTTACGGTTTTGCTAGATAGAGTTCCTTGAGTTCTATCTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR CCA 90 bp GTTACCAGTGGTTATCTCAGTGATAAGCCCATGGATGATGGTATTCTTTCCACCGTATGGTGCTTGTCATaGCTGAAGGGAGAGAAAATG +
Preference number: 4 (lower is better)
Translates to: VTSGYLSDKPMDDGILSTVWCLS*LKGEKM
Trigger: CATTTTCTCTCCCTTCAGCCATGACAAGCACCATAC...GGTGGAAAGAATACCATCATCCATGGGCTTATCACTGAGATAACCACTGGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR TCA 90 bp GGTAAACAAAGAGCAAATCCTCAGTTGACCAGACAATGCCATCTGCACATACCAAATTTGACCATGTTCTaGAGTTTCATGCGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: GKQRANPQLTRQCHLHIPNLTMF*SFMRLS
Trigger: AGACAGGCGCATGAAACTTCAGAACATGGTCAAATT...TGGTATGTGCAGATGGCATTGTCTGGTCAACTGAGGATTTGCTCTTTGTTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR GCA 90 bp GTGTCATGCACTTGTATCCCAGCTACTCTGGAGAATAAGGCAGGAGACTTGCTTACTATAAAAGTGTCATaGACTTGTATCCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: VSCTCIPATLENKAGDLLTIKVS*TCIPAT
Trigger: AGTAGCTGGGATACAAGTGCATGACACTTTTATAGT...AAGCAAGTCTCCTGCCTTATTCTCCAGAGTAGCTGGGATACAAGTGCATGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR CCA 90 bp AGAACTCAAGGAACTCTATCTAGCAAAACCGTAAATGGGGAGCGCAGGTTAGGTTCAGTGATAAGCCCATaGATGATGGTATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: RTQGTLSSKTVNGERRLGSVISP*MMVFFP
Trigger: TGGAAAGAATACCATCATCCATGGGCTTATCACTGA...ACCTAACCTGCGCTCCCCATTTACGGTTTTGCTAGATAGAGTTCCTTGAGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563525.2
3UTR CAA 72 bp TTGGTGAGCAGACCTCTATGGAATGCAAACACGTATTaGAAAGGCCTACAAAGAGAACTCCAACTTCGGAAA +
Preference number: 4 (lower is better)
Translates to: LVSRPLWNANTY*KGLQRELQLRK
Trigger: TTTCCGAAGTTGGAGTTCTCTTTGTAGGCCTTTCAAATACGTGTTTGCATTCCATAGAGGTCTGCTCACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.11
CDS-3UTR GCA 90 bp GGTAAACAAAGAGCAAATCCTCAGTTGACCAGACAATGCCATCTGCACATACCACAGACGAACACTTTCTaGATCAGGAATATACTCATC +
Preference number: 4 (lower is better)
Translates to: GKQRANPQLTRQCHLHIPQTNTF*IRNILI
Trigger: GATGAGTATATTCCTGATGCAGAAAGTGTTCGTCTG...TGGTATGTGCAGATGGCATTGTCTGGTCAACTGAGGATTTGCTCTTTGTTTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR GCA 90 bp CCAAGAGTAGTCAAATTCACAGAGACAGAAAGTATGGTGCTTGTCATGGCTGAAGAATGTTCGTTTATTTaGTCTTGGGCAGAGATCCAG +
Preference number: 4 (lower is better)
Translates to: PRVVKFTETESMVLVMAEECSFI*SWAEIQ
Trigger: CTGGATCTCTGCCCAAGAGCAAATAAACGAACATTC...TTCAGCCATGACAAGCACCATACTTTCTGTCTCTGTGAATTTGACTACTCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
3UTR CAA 72 bp ACTTTCGGGCCAAATAACCTTTCCTGTGGCCTAAAGTaGTACCTAGTAGTTGGAGATAATGAAATTTTCACT +
Preference number: 4 (lower is better)
Translates to: TFGPNNLSCGLK*YLVVGDNEIFT
Trigger: AGTGAAAATTTCATTATCTCCAACTACTAGGTACAACTTTAGGCCACAGGAAAGGTTATTTGGCCCGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CAA 72 bp GCATTCAGCTCACCACAGATTAAAACTAAATTTTATTaGCCTCCACAGTTAACACAGAGTGCCAAATTCTGG +
Preference number: 4 (lower is better)
Translates to: AFSSPQIKTKFY*PPQLTQSAKFW
Trigger: CCAGAATTTGGCACTCTGTGTTAACTGTGGAGGCAAATAAAATTTAGTTTTAATCTGTGGTGAGCTGAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.11
3UTR CAA 72 bp CTGAGTATATACCTGAGAAACATTAGTGTTAAAATATaGCCCTTTACAAAGACTGGTAGATGGGGCGAAAGT +
Preference number: 4 (lower is better)
Translates to: LSIYLRNISVKI*PFTKTGRWGES
Trigger: ACTTTCGCCCCATCTACCAGTCTTTGTAAAGGGCAATATTTTAACACTAATGTTTCTCAGGTATATACTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.11
CDS GCA 90 bp CTGCGGAGGCCGCCGCGGTCTGGGGCGGCGCCCTCAGAGCTAAGGTaGGAGAGCGTGGACAGCGTCTTGAGAACGCGGCTCATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LRRPPRSGAAPSELR*ESVDSVLRTRLMKL
Trigger: CAGCTTCATGAGCCGCGTTCTCAAGACGCTGTCCACGCTCTCGCACCTTAGCTCTGAGGGCGCCGCCCCAGACCGCGGCGGCCTCCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS GCA 90 bp CACGGACTCAGAGAGCGACGCCAGGGAGGTGCGTCTGGAGGAAGCTaGAGAGGTCACGCTGGCTGGCTTGCTGCCCGGGAGCCGGCTCAC +
Preference number: 5 (lower is better)
Translates to: HGLRERRQGGASGGS*RGHAGWLAAREPAH
Trigger: GTGAGCCGGCTCCCGGGCAGCAAGCCAGCCAGCGTGACCTCTGCAGCTTCCTCCAGACGCACCTCCCTGGCGTCGCTCTCTGAGTCCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS GCA 90 bp GGGAGGTGCGTCTGGAGGAAGCTGCAGAGGTCACGCTGGCTGGCTTaGTGCCCGGGAGCCGGCTCACCCAGTGTTCACACAGGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: GRCVWRKLQRSRWLA*CPGAGSPSVHTGKN
Trigger: GTTCTTCCCTGTGTGAACACTGGGTGAGCCGGCTCCCGGGCAGCAAGCCAGCCAGCGTGACCTCTGCAGCTTCCTCCAGACGCACCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CCA 90 bp CCCCTGCTCGGGCCTGGCTCACCCGAGGGGAATTGGGTTTGGAGGTaGAGGTGGCGCTGGCTCTGTCAGAACCCAAGCTTTGTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: PLLGPGSPEGNWVWR*RWRWLCQNPSFVWS
Trigger: GCTCCAGACAAAGCTTGGGTTCTGACAGAGCCAGCGCCACCTCCACCTCCAAACCCAATTCCCCTCGGGTGAGCCAGGCCCGAGCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CCA 90 bp TGCCCTCCCCTGCTCGGGCCTGGCTCACCCGAGGGGAATTGGGTTTaGAGGTGGAGGTGGCGCTGGCTCTGTCAGAACCCAAGCTTTGTC +
Preference number: 5 (lower is better)
Translates to: CPPLLGPGSPEGNWV*RWRWRWLCQNPSFV
Trigger: GACAAAGCTTGGGTTCTGACAGAGCCAGCGCCACCTCCACCTCCAAACCCAATTCCCCTCGGGTGAGCCAGGCCCGAGCAGGGGAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CCA 90 bp CTCGGGCCTGGCTCACCCGAGGGGAATTGGGTTTGGAGGTGGAGGTaGCGCTGGCTCTGTCAGAACCCAAGCTTTGTCTGGAGCCCTCTC +
Preference number: 5 (lower is better)
Translates to: LGPGSPEGNWVWRWR*RWLCQNPSFVWSPL
Trigger: GAGAGGGCTCCAGACAAAGCTTGGGTTCTGACAGAGCCAGCGCCACCTCCACCTCCAAACCCAATTCCCCTCGGGTGAGCCAGGCCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS GCA 90 bp TTTCTCCAGTCATCTCCACGGACTCAGAGAGCGACGCCAGGGAGGTaGGTCTGGAGGAAGCTGCAGAGGTCACGCTGGCTGGCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: FLQSSPRTQRATPGR*VWRKLQRSRWLACC
Trigger: GCAGCAAGCCAGCCAGCGTGACCTCTGCAGCTTCCTCCAGACGCACCTCCCTGGCGTCGCTCTCTGAGTCCGTGGAGATGACTGGAGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CCA 90 bp GTCCCTCCCGAGTCCATAGGGCCGTCTCCACGGGGACCAATGCGATaGCAAACTCCAGCTGCTCTGGCTCCTCTTAACCACGTGAGGTGT +
Preference number: 5 (lower is better)
Translates to: VPPESIGPSPRGPMR*QTPAALAPLNHVRC
Trigger: ACACCTCACGTGGTTAAGAGGAGCCAGAGCAGCTGGAGTTTGCCATCGCATTGGTCCCCGTGGAGACGGCCCTATGGACTCGGGAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000563525.2
CDS GCA 90 bp TCAGGCAGAGTCCAGAGGCTTAACGTAATGCTTCCCTGCTGCAGCTaGTTACAGTGTGGGCAACGCCAGGCATCATCGGGGGCAAGCCGC +
Preference number: 5 (lower is better)
Translates to: SGRVQRLNVMLPCCS*LQCGQRQASSGASR
Trigger: GCGGCTTGCCCCCGATGATGCCTGGCGTTGCCCACACTGTAAGCAGCTGCAGCAGGGAAGCATTACGTTAAGCCTCTGGACTCTGCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000563525.2
CDS CCA 90 bp CCTGGCTCACCCGAGGGGAATTGGGTTTGGAGGTGGAGGTGGCGCTaGCTCTGTCAGAACCCAAGCTTTGTCTGGAGCCCTCTCTACTCA +
Preference number: 5 (lower is better)
Translates to: PGSPEGNWVWRWRWR*LCQNPSFVWSPLYS
Trigger: TGAGTAGAGAGGGCTCCAGACAAAGCTTGGGTTCTGACAGAGCCAGCGCCACCTCCACCTCCAAACCCAATTCCCCTCGGGTGAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS TCA 90 bp CAGGGCCCGAGGCCTTTTTGGCAGATGTGGAGGAAGCAGTGTAGGTaGGGGCCGAGGCTGACTTCTGCTTCTGTGGCGAAGGAGATGACA +
Preference number: 5 (lower is better)
Translates to: QGPRPFWQMWRKQCR*GPRLTSASVAKEMT
Trigger: TGTCATCTCCTTCGCCACAGAAGCAGAAGTCAGCCTCGGCCCTCACCTACACTGCTTCCTCCACATCTGCCAAAAAGGCCTCGGGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CCA 90 bp AACTTGTGGAGCCTGCCACCGAGCTGTTGGCTGACCATGACGGGATaGCTGTCCGCCTCTGGTAGAAGAGGATGTATGCTGTCTGCGTGC +
Preference number: 5 (lower is better)
Translates to: NLWSLPPSCWLTMTG*LSASGRRGCMLSAC
Trigger: GCACGCAGACAGCATACATCCTCTTCTACCAGAGGCGGACAGCCATCCCGTCATGGTCAGCCAACAGCTCGGTGGCAGGCTCCACAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS GCA 90 bp AGCACATCAGGCAGAGTCCAGAGGCTTAACGTAATGCTTCCCTGCTaGAGCTGCTTACAGTGTGGGCAACGCCAGGCATCATCGGGGGCA +
Preference number: 5 (lower is better)
Translates to: STSGRVQRLNVMLPC*SCLQCGQRQASSGA
Trigger: TGCCCCCGATGATGCCTGGCGTTGCCCACACTGTAAGCAGCTGCAGCAGGGAAGCATTACGTTAAGCCTCTGGACTCTGCCTGATGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000563525.2
CDS GCA 90 bp ATGGACCAGAGAGCGGGGGCAGGCGGTCCCCTTGTGCTGAATGTTTaGTCTGTGTATCTACGACACTGGAGTTCAATCTGCGGGTGTCCG +
Preference number: 5 (lower is better)
Translates to: MDQRAGAGGPLVLNV*SVYLRHWSSICGCP
Trigger: CGGACACCCGCAGATTGAACTCCAGTGTCGTAGATACACAGAGCAAACATTCAGCACAAGGGGACCGCCTGCCCCCGCTCTCTGGTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CCA 90 bp GGCCCGGCCCACAGCCTTGTGCTCACGGCGACTATGACTGTCGCTTaGTTCCTGGTAACTGCTAGAAAGGTTCCGCAAGCTACCAAAGCA +
Preference number: 5 (lower is better)
Translates to: GPAHSLVLTATMTVA*FLVTARKVPQATKA
Trigger: TGCTTTGGTAGCTTGCGGAACCTTTCTAGCAGTTACCAGGAACCAAGCGACAGTCATAGTCGCCGTGAGCACAAGGCTGTGGGCCGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CCA 90 bp TGGAGGTGGAGGTGGCGCTGGCTCTGTCAGAACCCAAGCTTTGTCTaGAGCCCTCTCTACTCAAGCTGTGGTCTGAAGTCCTGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: WRWRWRWLCQNPSFV*SPLYSSCGLKSCSS
Trigger: GGAAGAGCAGGACTTCAGACCACAGCTTGAGTAGAGAGGGCTCCAGACAAAGCTTGGGTTCTGACAGAGCCAGCGCCACCTCCACCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CCA 90 bp GCAGACTGCCTGCCACCCGGAGACGAGGGAACTCCAGAGTCTAGTTaGGAAGACTTGGATTTGCGAGCGGACAGCAGGGAATGTTTGGCA +
Preference number: 5 (lower is better)
Translates to: ADCLPPGDEGTPESS*EDLDLRADSRECLA
Trigger: TGCCAAACATTCCCTGCTGTCCGCTCGCAAATCCAAGTCTTCCCAACTAGACTCTGGAGTTCCCTCGTCTCCGGGTGGCAGGCAGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS GCA 90 bp TCCTTGGTGACAAGCTGCTCTTTTCCCGTTGTATTTGCATTTGGCTaGTGGGAAGCTGGAGGCTGGTGGCCTCTCTCTGCCTCGTCGTCC +
Preference number: 5 (lower is better)
Translates to: SLVTSCSFPVVFAFG*WEAGGWWPLSASSS
Trigger: GGACGACGAGGCAGAGAGAGGCCACCAGCCTCCAGCTTCCCAGCAGCCAAATGCAAATACAACGGGAAAAGAGCAGCTTGTCACCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS TCA 90 bp GTTTCTTTGCGAGTGAGCCTGGGTGGCTGGGGGCTTTCACCTCTTTaGCTGGAGAGCTGTCTACGGAGTCGCTCTGATCCACATAAGCGA +
Preference number: 5 (lower is better)
Translates to: VSLRVSLGGWGLSPL*LESCLRSRSDPHKR
Trigger: TCGCTTATGTGGATCAGAGCGACTCCGTAGACAGCTCTCCAGTCAAAGAGGTGAAAGCCCCCAGCCACCCAGGCTCACTCGCAAAGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS TCA 90 bp GGAACTGGGGGATCTCTTAGTTGTGCTCTCTGGTTTCTTTGCGAGTaGGCCTGGGTGGCTGGGGGCTTTCACCTCTTTGACTGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: GTGGSLSCALWFLCE*AWVAGGFHLFDWRA
Trigger: AGCTCTCCAGTCAAAGAGGTGAAAGCCCCCAGCCACCCAGGCTCACTCGCAAAGAAACCAGAGAGCACAACTAAGAGATCCCCCAGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS TCA 90 bp AATGAGGCTCTAAAGTCAAGTCACCCTGCCACAAGCAAACCCGTCTaGAGGACTCGCCAGCACAGACACGCAGCCTCTCACACTGCAGAC +
Preference number: 5 (lower is better)
Translates to: NEALKSSHPATSKPV*RTRQHRHAASHTAD
Trigger: GTCTGCAGTGTGAGAGGCTGCGTGTCTGTGCTGGCGAGTCCTTCAGACGGGTTTGCTTGTGGCAGGGTGACTTGACTTTAGAGCCTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS TCA 90 bp TGGAAACTGCCCTCACAGTTGGCACACTGCCTACCGGAGGGGAAATaGGGCTCTAAAGTCAAGTCACCCTGCCACAAGCAAACCCGTCTG +
Preference number: 5 (lower is better)
Translates to: WKLPSQLAHCLPEGK*GSKVKSPCHKQTRL
Trigger: CAGACGGGTTTGCTTGTGGCAGGGTGACTTGACTTTAGAGCCTCATTTCCCCTCCGGTAGGCAGTGTGCCAACTGTGAGGGCAGTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS GCA 90 bp ATAAGCACATCAGGCAGAGTCCAGAGGCTTAACGTAATGCTTCCCTaGTGCAGCTGCTTACAGTGTGGGCAACGCCAGGCATCATCGGGG +
Preference number: 5 (lower is better)
Translates to: ISTSGRVQRLNVMLP*CSCLQCGQRQASSG
Trigger: CCCCGATGATGCCTGGCGTTGCCCACACTGTAAGCAGCTGCAGCAGGGAAGCATTACGTTAAGCCTCTGGACTCTGCCTGATGTGCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000563525.2
CDS TCA 90 bp CAAGATCCGTCGAGCGCCGGGTTTCCTTCTGTCTCAAGGCTGATTTaGAGAAGGACAGCCCCTTGTCCTCAGACTTGCTGTCCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: QDPSSAGFPSVSRLI*RRTAPCPQTCCPSS
Trigger: TGAAGAGGGACAGCAAGTCTGAGGACAAGGGGCTGTCCTTCTTCAAATCAGCCTTGAGACAGAAGGAAACCCGGCGCTCGACGGATCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS GCA 90 bp GCCCAGTGCAGGCTCGGTTACACACCAACAGGACAATCTTGTCGCTaGCTGCTCTTGATGTGGGAGAATCCATTTTCCCCTGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: AQCRLGYTPTGQSCR*LLLMWENPFSPALL
Trigger: CAGCAAAGCAGGGGAAAATGGATTCTCCCACATCAAGAGCAGGCAGCGACAAGATTGTCCTGTTGGTGTGTAACCGAGCCTGCACTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS GCA 90 bp AAGAGGATGTATGCTGTCTGCGTGCAGACCTCATCTTCTGACAGCTaGTGCACATCGCTGTCATCGAAGCAGTACCAGAGGCCGTCCACA +
Preference number: 5 (lower is better)
Translates to: KRMYAVCVQTSSSDS*CTSLSSKQYQRPST
Trigger: TGTGGACGGCCTCTGGTACTGCTTCGATGACAGCGATGTGCAGCAGCTGTCAGAAGATGAGGTCTGCACGCAGACAGCATACATCCTCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS CCA 90 bp GATCTCTTAGTTGTGCTCTCTGGTTTCTTTGCGAGTGAGCCTGGGTaGCTGGGGGCTTTCACCTCTTTGACTGGAGAGCTGTCTACGGAG +
Preference number: 5 (lower is better)
Translates to: DLLVVLSGFFASEPG*LGAFTSLTGELSTE
Trigger: CTCCGTAGACAGCTCTCCAGTCAAAGAGGTGAAAGCCCCCAGCCACCCAGGCTCACTCGCAAAGAAACCAGAGAGCACAACTAAGAGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS TCA 90 bp CAATGCGATGGCAAACTCCAGCTGCTCTGGCTCCTCTTAACCACGTaGGGTGTCATGTCCAGGCCAGTCAAGGGGAATTTGACCATGTTC +
Preference number: 5 (lower is better)
Translates to: QCDGKLQLLWLLLTT*GVMSRPVKGNLTMF
Trigger: GAACATGGTCAAATTCCCCTTGACTGGCCTGGACATGACACCTCACGTGGTTAAGAGGAGCCAGAGCAGCTGGAGTTTGCCATCGCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000563525.2
CDS TCA 90 bp GTTATCAAATGGACCAGAGAGCGGGGGCAGGCGGTCCCCTTGTGCTaGATGTTTGCTCTGTGTATCTACGACACTGGAGTTCAATCTGCG +
Preference number: 5 (lower is better)
Translates to: VIKWTRERGQAVPLC*MFALCIYDTGVQSA
Trigger: CGCAGATTGAACTCCAGTGTCGTAGATACACAGAGCAAACATTCAGCACAAGGGGACCGCCTGCCCCCGCTCTCTGGTCCATTTGATAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CCA 90 bp TTGCTCTTGGGCAGAGATCCAGAGGATGGAAACTGCCCTCACAGTTaGCACACTGCCTACCGGAGGGGAAATGAGGCTCTAAAGTCAAGT +
Preference number: 5 (lower is better)
Translates to: LLLGRDPEDGNCPHS*HTAYRRGNEALKSS
Trigger: ACTTGACTTTAGAGCCTCATTTCCCCTCCGGTAGGCAGTGTGCCAACTGTGAGGGCAGTTTCCATCCTCTGGATCTCTGCCCAAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS TCA 90 bp ATGGTGGCTTCAGAGGAGGCTGGCCACTCTGCTTCACTGAATGGTTaGGGTCTTCATGAACTCGGTCCAAAAGCCACAGCAGAAACTCCT +
Preference number: 5 (lower is better)
Translates to: MVASEEAGHSASLNG*GLHELGPKATAETP
Trigger: AGGAGTTTCTGCTGTGGCTTTTGGACCGAGTTCATGAAGACCTCAACCATTCAGTGAAGCAGAGTGGCCAGCCTCCTCTGAAGCCACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS GCA 90 bp GTTCCGCAAGCTACCAAAGCAAGAGATGGAGACCTTGTCATCTGCTaGCTCCCCAATCTTCTCCAAGGTGGAAGCAGAGCTGTGAATTGG +
Preference number: 5 (lower is better)
Translates to: VPQATKARDGDLVIC*LPNLLQGGSRAVNW
Trigger: CCAATTCACAGCTCTGCTTCCACCTTGGAGAAGATTGGGGAGGCAGCAGATGACAAGGTCTCCATCTCTTGCTTTGGTAGCTTGCGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS TCA 90 bp GGCTCGGTTACACACCAACAGGACAATCTTGTCGCTGCCTGCTCTTaGTGTGGGAGAATCCATTTTCCCCTGCTTTGCTGCTGTTTGTGT +
Preference number: 5 (lower is better)
Translates to: GSVTHQQDNLVAACS*CGRIHFPLLCCCLC
Trigger: ACACAAACAGCAGCAAAGCAGGGGAAAATGGATTCTCCCACATCAAGAGCAGGCAGCGACAAGATTGTCCTGTTGGTGTGTAACCGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS TCA 90 bp TTGACGGCCAAGGGGCTGGTGACAGAAGATCTGGATGACAAACTCTaGCGCTGGACACTTCTCACAAATGGTCGAGTTGAAAAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: LTAKGLVTEDLDDKL*RWTLLTNGRVEKPP
Trigger: TGGAGGCTTTTCAACTCGACCATTTGTGAGAAGTGTCCAGCGTCAGAGTTTGTCATCCAGATCTTCTGTCACCAGCCCCTTGGCCGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS GCA 90 bp CACAGCAGAAACTCCTGGGCATCATGTTGGGAATTTCCCCGGTACTaGAGTGCATTCTTTGACACAATAGTCTTGAAGTCGCGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: HSRNSWASCWEFPRY*SAFFDTIVLKSRLC
Trigger: GCACAGCCGCGACTTCAAGACTATTGTGTCAAAGAATGCACTGCAGTACCGGGGAAATTCCCAACATGATGCCCAGGAGTTTCTGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS GCA 90 bp AAGGTTCCGCAAGCTACCAAAGCAAGAGATGGAGACCTTGTCATCTaGTGCCTCCCCAATCTTCTCCAAGGTGGAAGCAGAGCTGTGAAT +
Preference number: 5 (lower is better)
Translates to: KVPQATKARDGDLVI*CLPNLLQGGSRAVN
Trigger: ATTCACAGCTCTGCTTCCACCTTGGAGAAGATTGGGGAGGCAGCAGATGACAAGGTCTCCATCTCTTGCTTTGGTAGCTTGCGGAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS TCA 90 bp AATCTTCTCCAAGGTGGAAGCAGAGCTGTGAATTGGCGAATCCCCTaGAAATCGGGATGGAGAATTGGAGCGCATCTGCAGCTTAGCAGA +
Preference number: 5 (lower is better)
Translates to: NLLQGGSRAVNWRIP*KSGWRIGAHLQLSR
Trigger: TCTGCTAAGCTGCAGATGCGCTCCAATTCTCCATCCCGATTTTCAGGGGATTCGCCAATTCACAGCTCTGCTTCCACCTTGGAGAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS-3UTR CAA 90 bp CAAAGAGCAAATCCTCAGTTGACCAGACAATGCCATCTGCACATACCACTCCCCATGATGACGCTCCCTTaGCAGACGAACACTTTCTGC +
Preference number: 5 (lower is better)
Translates to: QRANPQLTRQCHLHIPLPMMTLP*QTNTFC
Trigger: GCAGAAAGTGTTCGTCTGCAAAGGGAGCGTCATCAT...GGGGAGTGGTATGTGCAGATGGCATTGTCTGGTCAACTGAGGATTTGCTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR CAA 90 bp GTGTCATGCACTTGTATCCCAGCTACTCTGGAGAATAAGGCAGGAGACTTGCTTGCAAGCCGCTCCTCTTaGGTGTACAGTTGGAAACAC +
Preference number: 5 (lower is better)
Translates to: VSCTCIPATLENKAGDLLASRSS*VYSWKH
Trigger: GTGTTTCCAACTGTACACCAAAGAGGAGCGGCTTGC...AAGCAAGTCTCCTGCCTTATTCTCCAGAGTAGCTGGGATACAAGTGCATGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS GCA 90 bp CTGGACGACCCAACTCAGGAAAAGGAGGAAGAATGTTCGTTTATTTaGTCTTGGGCAGAGATCCAGAGGATGGAAACTGCCCTCACAGTT +
Preference number: 5 (lower is better)
Translates to: LDDPTQEKEEECSFI*SWAEIQRMETALTV
Trigger: AACTGTGAGGGCAGTTTCCATCCTCTGGATCTCTGCCCAAGAGCAAATAAACGAACATTCTTCCTCCTTTTCCTGAGTTGGGTCGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS GCA 90 bp CGCAGGTTAGGTAAACAAAGAGCAAATCCTCAGTTGACCAGACAATaGCATCTGCACATACCACTCCCCAATCAGTCAGCTACCTACTGG +
Preference number: 5 (lower is better)
Translates to: RRLGKQRANPQLTRQ*HLHIPLPNQSATYW
Trigger: CCAGTAGGTAGCTGACTGATTGGGGAGTGGTATGTGCAGATGGCATTGTCTGGTCAACTGAGGATTTGCTCTTTGTTTACCTAACCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS CCA 90 bp GACCCAACTCAGGAAAAGGAGGAAGAATGTTCGTTTATTTGCTCTTaGGCAGAGATCCAGAGGATGGAAACTGCCCTCACAGTTGGCACA +
Preference number: 5 (lower is better)
Translates to: DPTQEKEEECSFICS*AEIQRMETALTVGT
Trigger: TGTGCCAACTGTGAGGGCAGTTTCCATCCTCTGGATCTCTGCCCAAGAGCAAATAAACGAACATTCTTCCTCCTTTTCCTGAGTTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR CAA 90 bp CCAAGAGTAGTCAAATTCACAGAGACAGAAAGTATGGTGCTTGTCATGGCTGAAAAACTGCCCTCACAGTaGGCACACTGCCTACCGGAG +
Preference number: 5 (lower is better)
Translates to: PRVVKFTETESMVLVMAEKLPSQ*AHCLPE
Trigger: CTCCGGTAGGCAGTGTGCCAACTGTGAGGGCAGTTT...TTCAGCCATGACAAGCACCATACTTTCTGTCTCTGTGAATTTGACTACTCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS GCA 90 bp CCACAAGATTTTAATGCCCTTTCTACTATTGGGTGGCACAAGGGCTaGTCCTCCTGGGGCAGCAAATATGTTATTCCAACAACACTGACC +
Preference number: 5 (lower is better)
Translates to: PQDFNALSTIGWHKG*SSWGSKYVIPTTLT
Trigger: GGTCAGTGTTGTTGGAATAACATATTTGCTGCCCCAGGAGGAGCAGCCCTTGTGCCACCCAATAGTAGAAAGGGCATTAAAATCTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS-3UTR CAA 90 bp GTTACCAGTGGTTATCTCAGTGATAAGCCCATGGATGATGGTATTCTTTCCACCATGCCCTTTCTACTATaGGGTGGCACAAGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: VTSGYLSDKPMDDGILSTMPFLL*GGTRAA
Trigger: AGCAGCCCTTGTGCCACCCAATAGTAGAAAGGGCAT...GGTGGAAAGAATACCATCATCCATGGGCTTATCACTGAGATAACCACTGGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS CCA 90 bp CAATGCCATCTGCACATACCACTCCCCAATCAGTCAGCTACCTACTaGACGACCCAACTCAGGAAAAGGAGGAAGAATGTTCGTTTATTT +
Preference number: 5 (lower is better)
Translates to: QCHLHIPLPNQSATY*TTQLRKRRKNVRLF
Trigger: AAATAAACGAACATTCTTCCTCCTTTTCCTGAGTTGGGTCGTCCAGTAGGTAGCTGACTGATTGGGGAGTGGTATGTGCAGATGGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR CAA 90 bp AGAGAAGATAGAACTCAAGGAACTCTATCTAGCAAAACCGTAAATGGGGAGCGCCAGAAAGTATGGTGCTaGTCATGGCTGAAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: REDRTQGTLSSKTVNGERQKVWC*SWLKGE
Trigger: CTCTCCCTTCAGCCATGACAAGCACCATACTTTCTG...GCGCTCCCCATTTACGGTTTTGCTAGATAGAGTTCCTTGAGTTCTATCTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS GCA 90 bp AAGATTTCCTTCTGCAGAAGGTCCCAAGCTATTGTCTTCTCTAAGTaGAGCACAAAAGGCAGTCCAAATCTTTTCCCTTGTTGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: KISFCRRSQAIVFSK*STKGSPNLFPCCPV
Trigger: CACTGGGCAACAAGGGAAAAGATTTGGACTGCCTTTTGTGCTGCACTTAGAGAAGACAATAGCTTGGGACCTTCTGCAGAAGGAAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS GCA 90 bp CTCTTGTCTCCTTGTCCCACTCGACTACTAATTTCACATGAGCAGTaGCACCTGGTCCACAAGATTTTAATGCCCTTTCTACTATTGGGT +
Preference number: 5 (lower is better)
Translates to: LLSPCPTRLLISHEQ*HLVHKILMPFLLLG
Trigger: ACCCAATAGTAGAAAGGGCATTAAAATCTTGTGGACCAGGTGGCACTGCTCATGTGAAATTAGTAGTCGAGTGGGACAAGGAGACAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000563525.2
CDS-3UTR CAA 90 bp GTGTCATGCACTTGTATCCCAGCTACTCTGGAGAATAAGGCAGGAGACTTGCTTAGAATGTTCGTTTATTaGCTCTTGGGCAGAGATCCA +
Preference number: 5 (lower is better)
Translates to: VSCTCIPATLENKAGDLLRMFVY*LLGRDP
Trigger: TGGATCTCTGCCCAAGAGCAAATAAACGAACATTCT...AAGCAAGTCTCCTGCCTTATTCTCCAGAGTAGCTGGGATACAAGTGCATGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR CAA 90 bp GGTAAACAAAGAGCAAATCCTCAGTTGACCAGACAATGCCATCTGCACATACCAAGAGCAAATCCTCAGTaGACCAGACAATGCCATCTG +
Preference number: 5 (lower is better)
Translates to: GKQRANPQLTRQCHLHIPRANPQ*TRQCHL
Trigger: CAGATGGCATTGTCTGGTCAACTGAGGATTTGCTCT...TGGTATGTGCAGATGGCATTGTCTGGTCAACTGAGGATTTGCTCTTTGTTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS TCA 90 bp AAGAAATCTCTTGTCTCCTTGTCCCACTCGACTACTAATTTCACATaGGCAGTGCCACCTGGTCCACAAGATTTTAATGCCCTTTCTACT +
Preference number: 5 (lower is better)
Translates to: KKSLVSLSHSTTNFT*AVPPGPQDFNALST
Trigger: AGTAGAAAGGGCATTAAAATCTTGTGGACCAGGTGGCACTGCTCATGTGAAATTAGTAGTCGAGTGGGACAAGGAGACAAGAGATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000563525.2
CDS CCA 90 bp CTAAATATTTCGGGAGTCTCAAAGGCAAAAATGCAGTCGCTTTCATaGACTGTTTCCAGGTCGTCTGTATCACAAAAGGAACGATGGAAC +
Preference number: 5 (lower is better)
Translates to: LNISGVSKAKMQSLS*TVSRSSVSQKERWN
Trigger: GTTCCATCGTTCCTTTTGTGATACAGACGACCTGGAAACAGTCCATGAAAGCGACTGCATTTTTGCCTTTGAGACTCCCGAAATATTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS-3UTR CAA 90 bp GGTAAACAAAGAGCAAATCCTCAGTTGACCAGACAATGCCATCTGCACATACCAAAATCTCTTGTCTCCTaGTCCCACTCGACTACTAAT +
Preference number: 5 (lower is better)
Translates to: GKQRANPQLTRQCHLHIPKSLVS*SHSTTN
Trigger: ATTAGTAGTCGAGTGGGACAAGGAGACAAGAGATTT...TGGTATGTGCAGATGGCATTGTCTGGTCAACTGAGGATTTGCTCTTTGTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS-3UTR CAA 90 bp GGTAAACAAAGAGCAAATCCTCAGTTGACCAGACAATGCCATCTGCACATACCACAAATAAGAAATCTCTaGTCTCCTTGTCCCACTCGA +
Preference number: 5 (lower is better)
Translates to: GKQRANPQLTRQCHLHIPQIRNL*SPCPTR
Trigger: TCGAGTGGGACAAGGAGACAAGAGATTTCTTATTTG...TGGTATGTGCAGATGGCATTGTCTGGTCAACTGAGGATTTGCTCTTTGTTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS GCA 90 bp TCAAAGAAGATCTGTATTGCGCTTGAAAGAGTTCTTGTACAAAAGTaGTACAGACAGGGAAAGATGGTCCCTCAGGCATCATATCAGTCT +
Preference number: 5 (lower is better)
Translates to: SKKICIALERVLVQK*YRQGKMVPQASYQS
Trigger: AGACTGATATGATGCCTGAGGGACCATCTTTCCCTGTCTGTAGCACTTTTGTACAAGAACTCTTTCAAGCGCAATACAGATCTTCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS CCA 72 bp CCGGCGGCCCGGACCCAGGCGCCGTTACCTTGGACATaGCGGCGGCCGCAGACACTCATCACCGCGCCCGCC +
Preference number: 6 (lower is better)
Translates to: PAARTQAPLPWT*RRPQTLITAPA
Trigger: GGCGGGCGCGGTGATGAGTGTCTGCGGCCGCCGCCATGTCCAAGGTAACGGCGCCTGGGTCCGGGCCGCCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS GCA 72 bp CCGCCGCGGTCTGGGGCGGCGCCCTCAGAGCTAAGGTaGGAGAGCGTGGACAGCGTCTTGAGAACGCGGCTC +
Preference number: 6 (lower is better)
Translates to: PPRSGAAPSELR*ESVDSVLRTRL
Trigger: GAGCCGCGTTCTCAAGACGCTGTCCACGCTCTCGCACCTTAGCTCTGAGGGCGCCGCCCCAGACCGCGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS GCA 72 bp CTTGAGAACGCGGCTCATGAAGCTGCCCACCGAGCGTaGAGAGGAGGGCGAGGAGGGCGAGGAAGGCGCGGC +
Preference number: 6 (lower is better)
Translates to: LENAAHEAAHRA*RGGRGGRGRRG
Trigger: GCCGCGCCTTCCTCGCCCTCCTCGCCCTCCTCTGCACGCTCGGTGGGCAGCTTCATGAGCCGCGTTCTCAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS GCA 72 bp AGAGAGCGACGCCAGGGAGGTGCGTCTGGAGGAAGCTaGAGAGGTCACGCTGGCTGGCTTGCTGCCCGGGAG +
Preference number: 6 (lower is better)
Translates to: RERRQGGASGGS*RGHAGWLAARE
Trigger: CTCCCGGGCAGCAAGCCAGCCAGCGTGACCTCTGCAGCTTCCTCCAGACGCACCTCCCTGGCGTCGCTCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CCA 72 bp GGTGCGTCTGGAGGAAGCTGCAGAGGTCACGCTGGCTaGCTTGCTGCCCGGGAGCCGGCTCACCCAGTGTTC +
Preference number: 6 (lower is better)
Translates to: GASGGSCRGHAG*LAAREPAHPVF
Trigger: GAACACTGGGTGAGCCGGCTCCCGGGCAGCAAGCCAGCCAGCGTGACCTCTGCAGCTTCCTCCAGACGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CAA 90 bp GGGGCGGCGCCCTCAGAGCTAAGGTGCGAGAGCGTGGACAGCGTCTaGAGAACGCGGCTCATGAAGCTGCCCACCGAGCGTGCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: GAAPSELRCESVDSV*RTRLMKLPTERAEE
Trigger: CTCCTCTGCACGCTCGGTGGGCAGCTTCATGAGCCGCGTTCTCAAGACGCTGTCCACGCTCTCGCACCTTAGCTCTGAGGGCGCCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS GCA 72 bp GTCTGGAGGAAGCTGCAGAGGTCACGCTGGCTGGCTTaGTGCCCGGGAGCCGGCTCACCCAGTGTTCACACA +
Preference number: 6 (lower is better)
Translates to: VWRKLQRSRWLA*CPGAGSPSVHT
Trigger: TGTGTGAACACTGGGTGAGCCGGCTCCCGGGCAGCAAGCCAGCCAGCGTGACCTCTGCAGCTTCCTCCAGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CAA 90 bp CTGCCCTCCCCTGCTCGGGCCTGGCTCACCCGAGGGGAATTGGGTTaGGAGGTGGAGGTGGCGCTGGCTCTGTCAGAACCCAAGCTTTGT +
Preference number: 6 (lower is better)
Translates to: LPSPARAWLTRGELG*EVEVALALSEPKLC
Trigger: ACAAAGCTTGGGTTCTGACAGAGCCAGCGCCACCTCCACCTCCAAACCCAATTCCCCTCGGGTGAGCCAGGCCCGAGCAGGGGAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS GCA 72 bp TCATCTCCACGGACTCAGAGAGCGACGCCAGGGAGGTaGGTCTGGAGGAAGCTGCAGAGGTCACGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: SSPRTQRATPGR*VWRKLQRSRWL
Trigger: CAGCCAGCGTGACCTCTGCAGCTTCCTCCAGACGCACCTCCCTGGCGTCGCTCTCTGAGTCCGTGGAGATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CCA 72 bp GGGCCTGGCTCACCCGAGGGGAATTGGGTTTGGAGGTaGAGGTGGCGCTGGCTCTGTCAGAACCCAAGCTTT +
Preference number: 6 (lower is better)
Translates to: GPGSPEGNWVWR*RWRWLCQNPSF
Trigger: AAAGCTTGGGTTCTGACAGAGCCAGCGCCACCTCCACCTCCAAACCCAATTCCCCTCGGGTGAGCCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CAA 72 bp CCCTCAGAGCTAAGGTGCGAGAGCGTGGACAGCGTCTaGAGAACGCGGCTCATGAAGCTGCCCACCGAGCGT +
Preference number: 6 (lower is better)
Translates to: PSELRCESVDSV*RTRLMKLPTER
Trigger: ACGCTCGGTGGGCAGCTTCATGAGCCGCGTTCTCAAGACGCTGTCCACGCTCTCGCACCTTAGCTCTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS CCA 72 bp CCCGAGGGGAATTGGGTTTGGAGGTGGAGGTGGCGCTaGCTCTGTCAGAACCCAAGCTTTGTCTGGAGCCCT +
Preference number: 6 (lower is better)
Translates to: PEGNWVWRWRWR*LCQNPSFVWSP
Trigger: AGGGCTCCAGACAAAGCTTGGGTTCTGACAGAGCCAGCGCCACCTCCACCTCCAAACCCAATTCCCCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS TCA 72 bp CGAGTGAGCCTGGGTGGCTGGGGGCTTTCACCTCTTTaGCTGGAGAGCTGTCTACGGAGTCGCTCTGATCCA +
Preference number: 6 (lower is better)
Translates to: RVSLGGWGLSPL*LESCLRSRSDP
Trigger: TGGATCAGAGCGACTCCGTAGACAGCTCTCCAGTCAAAGAGGTGAAAGCCCCCAGCCACCCAGGCTCACTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS GCA 72 bp TTCTTTGACACAATAGTCTTGAAGTCGCGGCTGTGCTaGGGGGTGTACTCCAGGGTCCAGAGGGCCCGCACC +
Preference number: 6 (lower is better)
Translates to: FFDTIVLKSRLC*GVYSRVQRART
Trigger: GGTGCGGGCCCTCTGGACCCTGGAGTACACCCCGCAGCACAGCCGCGACTTCAAGACTATTGTGTCAAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS GCA 72 bp GCATTCTTTGACACAATAGTCTTGAAGTCGCGGCTGTaGTGCGGGGTGTACTCCAGGGTCCAGAGGGCCCGC +
Preference number: 6 (lower is better)
Translates to: AFFDTIVLKSRL*CGVYSRVQRAR
Trigger: GCGGGCCCTCTGGACCCTGGAGTACACCCCGCAGCACAGCCGCGACTTCAAGACTATTGTGTCAAAGAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS CCA 72 bp GAGTCCATAGGGCCGTCTCCACGGGGACCAATGCGATaGCAAACTCCAGCTGCTCTGGCTCCTCTTAACCAC +
Preference number: 6 (lower is better)
Translates to: ESIGPSPRGPMR*QTPAALAPLNH
Trigger: GTGGTTAAGAGGAGCCAGAGCAGCTGGAGTTTGCCATCGCATTGGTCCCCGTGGAGACGGCCCTATGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000563525.2
CDS CCA 72 bp AGCCTGCCACCGAGCTGTTGGCTGACCATGACGGGATaGCTGTCCGCCTCTGGTAGAAGAGGATGTATGCTG +
Preference number: 6 (lower is better)
Translates to: SLPPSCWLTMTG*LSASGRRGCML
Trigger: CAGCATACATCCTCTTCTACCAGAGGCGGACAGCCATCCCGTCATGGTCAGCCAACAGCTCGGTGGCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS CAA 90 bp GTATCTACGACACTGGAGTTCAATCTGCGGGTGTCCGATTCGTCTTaGAACACGCCTTCCATGACAGCCAGAGGGGCCCGGCCCACAGCC +
Preference number: 6 (lower is better)
Translates to: VSTTLEFNLRVSDSS*NTPSMTARGARPTA
Trigger: GGCTGTGGGCCGGGCCCCTCTGGCTGTCATGGAAGGCGTGTTCAAAGACGAATCGGACACCCGCAGATTGAACTCCAGTGTCGTAGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS GCA 72 bp GTCCAGAGGCTTAACGTAATGCTTCCCTGCTGCAGCTaGTTACAGTGTGGGCAACGCCAGGCATCATCGGGG +
Preference number: 6 (lower is better)
Translates to: VQRLNVMLPCCS*LQCGQRQASSG
Trigger: CCCCGATGATGCCTGGCGTTGCCCACACTGTAAGCAGCTGCAGCAGGGAAGCATTACGTTAAGCCTCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000563525.2
CDS CAA 72 bp ACACTGGAGTTCAATCTGCGGGTGTCCGATTCGTCTTaGAACACGCCTTCCATGACAGCCAGAGGGGCCCGG +
Preference number: 6 (lower is better)
Translates to: TLEFNLRVSDSS*NTPSMTARGAR
Trigger: CCGGGCCCCTCTGGCTGTCATGGAAGGCGTGTTCAAAGACGAATCGGACACCCGCAGATTGAACTCCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CAA 90 bp AATGGACCAGAGAGCGGGGGCAGGCGGTCCCCTTGTGCTGAATGTTaGCTCTGTGTATCTACGACACTGGAGTTCAATCTGCGGGTGTCC +
Preference number: 6 (lower is better)
Translates to: NGPESGGRRSPCAEC*LCVSTTLEFNLRVS
Trigger: GGACACCCGCAGATTGAACTCCAGTGTCGTAGATACACAGAGCAAACATTCAGCACAAGGGGACCGCCTGCCCCCGCTCTCTGGTCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS TCA 72 bp TGGACCAGAGAGCGGGGGCAGGCGGTCCCCTTGTGCTaGATGTTTGCTCTGTGTATCTACGACACTGGAGTT +
Preference number: 6 (lower is better)
Translates to: WTRERGQAVPLC*MFALCIYDTGV
Trigger: AACTCCAGTGTCGTAGATACACAGAGCAAACATTCAGCACAAGGGGACCGCCTGCCCCCGCTCTCTGGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS TCA 72 bp CTAAAGTCAAGTCACCCTGCCACAAGCAAACCCGTCTaGAGGACTCGCCAGCACAGACACGCAGCCTCTCAC +
Preference number: 6 (lower is better)
Translates to: LKSSHPATSKPV*RTRQHRHAASH
Trigger: GTGAGAGGCTGCGTGTCTGTGCTGGCGAGTCCTTCAGACGGGTTTGCTTGTGGCAGGGTGACTTGACTTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS GCA 72 bp GGCAGAGTCCAGAGGCTTAACGTAATGCTTCCCTGCTaGAGCTGCTTACAGTGTGGGCAACGCCAGGCATCA +
Preference number: 6 (lower is better)
Translates to: GRVQRLNVMLPC*SCLQCGQRQAS
Trigger: TGATGCCTGGCGTTGCCCACACTGTAAGCAGCTGCAGCAGGGAAGCATTACGTTAAGCCTCTGGACTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000563525.2
CDS GCA 72 bp TCAGGCAGAGTCCAGAGGCTTAACGTAATGCTTCCCTaGTGCAGCTGCTTACAGTGTGGGCAACGCCAGGCA +
Preference number: 6 (lower is better)
Translates to: SGRVQRLNVMLP*CSCLQCGQRQA
Trigger: TGCCTGGCGTTGCCCACACTGTAAGCAGCTGCAGCAGGGAAGCATTACGTTAAGCCTCTGGACTCTGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000563525.2
CDS CCA 72 bp GTTGTGCTCTCTGGTTTCTTTGCGAGTGAGCCTGGGTaGCTGGGGGCTTTCACCTCTTTGACTGGAGAGCTG +
Preference number: 6 (lower is better)
Translates to: VVLSGFFASEPG*LGAFTSLTGEL
Trigger: CAGCTCTCCAGTCAAAGAGGTGAAAGCCCCCAGCCACCCAGGCTCACTCGCAAAGAAACCAGAGAGCACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CCA 72 bp AGGTGGCGCTGGCTCTGTCAGAACCCAAGCTTTGTCTaGAGCCCTCTCTACTCAAGCTGTGGTCTGAAGTCC +
Preference number: 6 (lower is better)
Translates to: RWRWLCQNPSFV*SPLYSSCGLKS
Trigger: GGACTTCAGACCACAGCTTGAGTAGAGAGGGCTCCAGACAAAGCTTGGGTTCTGACAGAGCCAGCGCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CAA 72 bp GAGCTCCCACCAGCCTTTTTAGAGAGCAAGGCTGTCTaGCCAAGATCCGTCGAGCGCCGGGTTTCCTTCTGT +
Preference number: 6 (lower is better)
Translates to: ELPPAFLESKAV*PRSVERRVSFC
Trigger: ACAGAAGGAAACCCGGCGCTCGACGGATCTTGGCAAGACAGCCTTGCTCTCTAAAAAGGCTGGTGGGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS TCA 72 bp GGCAAACTCCAGCTGCTCTGGCTCCTCTTAACCACGTaGGGTGTCATGTCCAGGCCAGTCAAGGGGAATTTG +
Preference number: 6 (lower is better)
Translates to: GKLQLLWLLLTT*GVMSRPVKGNL
Trigger: CAAATTCCCCTTGACTGGCCTGGACATGACACCTCACGTGGTTAAGAGGAGCCAGAGCAGCTGGAGTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000563525.2
CDS TCA 72 bp CCCTCACAGTTGGCACACTGCCTACCGGAGGGGAAATaGGGCTCTAAAGTCAAGTCACCCTGCCACAAGCAA +
Preference number: 6 (lower is better)
Translates to: PSQLAHCLPEGK*GSKVKSPCHKQ
Trigger: TTGCTTGTGGCAGGGTGACTTGACTTTAGAGCCTCATTTCCCCTCCGGTAGGCAGTGTGCCAACTGTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS GCA 72 bp AGAGCGGGGGCAGGCGGTCCCCTTGTGCTGAATGTTTaGTCTGTGTATCTACGACACTGGAGTTCAATCTGC +
Preference number: 6 (lower is better)
Translates to: RAGAGGPLVLNV*SVYLRHWSSIC
Trigger: GCAGATTGAACTCCAGTGTCGTAGATACACAGAGCAAACATTCAGCACAAGGGGACCGCCTGCCCCCGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CCA 72 bp GGAGAAGAAGGGGATGTACTTGAAAGGGATGACTCCTaGCTTGCCAAGGCTGGTCTCCCCTTCCGCAAGCTT +
Preference number: 6 (lower is better)
Translates to: GEEGDVLERDDS*LAKAGLPFRKL
Trigger: AAGCTTGCGGAAGGGGAGACCAGCCTTGGCAAGCCAGGAGTCATCCCTTTCAAGTACATCCCCTTCTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CAA 72 bp GAGAGCGGGGGCAGGCGGTCCCCTTGTGCTGAATGTTaGCTCTGTGTATCTACGACACTGGAGTTCAATCTG +
Preference number: 6 (lower is better)
Translates to: ESGGRRSPCAEC*LCVSTTLEFNL
Trigger: CAGATTGAACTCCAGTGTCGTAGATACACAGAGCAAACATTCAGCACAAGGGGACCGCCTGCCCCCGCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CAA 72 bp GAATGCCGTCCACTGCCCCTGGAAGAAGAATCTGCTTaGCTGCGGGAGCGGGAGGGCTTTAGAGAGACTTTT +
Preference number: 6 (lower is better)
Translates to: ECRPLPLEEESA*LREREGFRETF
Trigger: AAAAGTCTCTCTAAAGCCCTCCCGCTCCCGCAGCAAAGCAGATTCTTCTTCCAGGGGCAGTGGACGGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CAA 90 bp CCTTGTTGCCCAGTGCAGGCTCGGTTACACACCAACAGGACAATCTaGTCGCTGCCTGCTCTTGATGTGGGAGAATCCATTTTCCCCTGC +
Preference number: 6 (lower is better)
Translates to: PCCPVQARLHTNRTI*SLPALDVGESIFPC
Trigger: GCAGGGGAAAATGGATTCTCCCACATCAAGAGCAGGCAGCGACAAGATTGTCCTGTTGGTGTGTAACCGAGCCTGCACTGGGCAACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS TCA 72 bp GGATCTCTTAGTTGTGCTCTCTGGTTTCTTTGCGAGTaGGCCTGGGTGGCTGGGGGCTTTCACCTCTTTGAC +
Preference number: 6 (lower is better)
Translates to: GSLSCALWFLCE*AWVAGGFHLFD
Trigger: GTCAAAGAGGTGAAAGCCCCCAGCCACCCAGGCTCACTCGCAAAGAAACCAGAGAGCACAACTAAGAGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS GCA 72 bp AATGCCGTCCACTGCCCCTGGAAGAAGAATCTGCTTTaGTGCGGGAGCGGGAGGGCTTTAGAGAGACTTTTA +
Preference number: 6 (lower is better)
Translates to: NAVHCPWKKNLL*CGSGRALERLL
Trigger: TAAAAGTCTCTCTAAAGCCCTCCCGCTCCCGCAGCAAAGCAGATTCTTCTTCCAGGGGCAGTGGACGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CCA 72 bp CACAGCCTTGTGCTCACGGCGACTATGACTGTCGCTTaGTTCCTGGTAACTGCTAGAAAGGTTCCGCAAGCT +
Preference number: 6 (lower is better)
Translates to: HSLVLTATMTVA*FLVTARKVPQA
Trigger: AGCTTGCGGAACCTTTCTAGCAGTTACCAGGAACCAAGCGACAGTCATAGTCGCCGTGAGCACAAGGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS TCA 72 bp CAAGGTGGAAGCAGAGCTGTGAATTGGCGAATCCCCTaGAAATCGGGATGGAGAATTGGAGCGCATCTGCAG +
Preference number: 6 (lower is better)
Translates to: QGGSRAVNWRIP*KSGWRIGAHLQ
Trigger: CTGCAGATGCGCTCCAATTCTCCATCCCGATTTTCAGGGGATTCGCCAATTCACAGCTCTGCTTCCACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS TCA 72 bp TTCTGCTTCTGTGGCGAAGGAGATGACACGGAGTCCTaGGATTTCGGGGATGACTCCTTTTTGGGTTGGGCA +
Preference number: 6 (lower is better)
Translates to: FCFCGEGDDTES*DFGDDSFLGWA
Trigger: TGCCCAACCCAAAAAGGAGTCATCCCCGAAATCTCAGGACTCCGTGTCATCTCCTTCGCCACAGAAGCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS GCA 72 bp TCCCCTGAAAATCGGGATGGAGAATTGGAGCGCATCTaGAGCTTAGCAGACAGGGACCATGAAGGTCTCATG +
Preference number: 6 (lower is better)
Translates to: SPENRDGELERI*SLADRDHEGLM
Trigger: CATGAGACCTTCATGGTCCCTGTCTGCTAAGCTGCAGATGCGCTCCAATTCTCCATCCCGATTTTCAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS GCA 72 bp GCTACCAAAGCAAGAGATGGAGACCTTGTCATCTGCTaGCTCCCCAATCTTCTCCAAGGTGGAAGCAGAGCT +
Preference number: 6 (lower is better)
Translates to: ATKARDGDLVIC*LPNLLQGGSRA
Trigger: AGCTCTGCTTCCACCTTGGAGAAGATTGGGGAGGCAGCAGATGACAAGGTCTCCATCTCTTGCTTTGGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CCA 72 bp CCTTGTCATCTGCTGCCTCCCCAATCTTCTCCAAGGTaGAAGCAGAGCTGTGAATTGGCGAATCCCCTGAAA +
Preference number: 6 (lower is better)
Translates to: PCHLLPPQSSPR*KQSCELANPLK
Trigger: TTTCAGGGGATTCGCCAATTCACAGCTCTGCTTCCACCTTGGAGAAGATTGGGGAGGCAGCAGATGACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CAA 72 bp CCAGTGCAGGCTCGGTTACACACCAACAGGACAATCTaGTCGCTGCCTGCTCTTGATGTGGGAGAATCCATT +
Preference number: 6 (lower is better)
Translates to: PVQARLHTNRTI*SLPALDVGESI
Trigger: AATGGATTCTCCCACATCAAGAGCAGGCAGCGACAAGATTGTCCTGTTGGTGTGTAACCGAGCCTGCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS CAA 72 bp GCGGACAGCAGGGAATGTTTGGCAGAAGCAGGGTCCTaGGTGACAAGCTGCTCTTTTCCCGTTGTATTTGCA +
Preference number: 6 (lower is better)
Translates to: ADSRECLAEAGS*VTSCSFPVVFA
Trigger: TGCAAATACAACGGGAAAAGAGCAGCTTGTCACCAAGGACCCTGCTTCTGCCAAACATTCCCTGCTGTCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CAA 90 bp CAGAGGTACGGCCACACCAATCCTCATGCAGTGAGAACATTTGCCTaGATACACTACAGTGACATAGAGAGGCCTTGTGTGGGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: QRYGHTNPHAVRTFA*IHYSDIERPCVGQR
Trigger: CCTCTGCCCCACACAAGGCCTCTCTATGTCACTGTAGTGTATCAAGGCAAATGTTCTCACTGCATGAGGATTGGTGTGGCCGTACCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS CAA 90 bp GATTTGCGAGCGGACAGCAGGGAATGTTTGGCAGAAGCAGGGTCCTaGGTGACAAGCTGCTCTTTTCCCGTTGTATTTGCATTTGGCTGC +
Preference number: 6 (lower is better)
Translates to: DLRADSRECLAEAGS*VTSCSFPVVFAFGC
Trigger: GCAGCCAAATGCAAATACAACGGGAAAAGAGCAGCTTGTCACCAAGGACCCTGCTTCTGCCAAACATTCCCTGCTGTCCGCTCGCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CAA 90 bp AGGCTCGGTTACACACCAACAGGACAATCTTGTCGCTGCCTGCTCTaGATGTGGGAGAATCCATTTTCCCCTGCTTTGCTGCTGTTTGTG +
Preference number: 6 (lower is better)
Translates to: RLGYTPTGQSCRCLL*MWENPFSPALLLFV
Trigger: CACAAACAGCAGCAAAGCAGGGGAAAATGGATTCTCCCACATCAAGAGCAGGCAGCGACAAGATTGTCCTGTTGGTGTGTAACCGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS TCA 72 bp ATGTTGGGAATTTCCCCGGTACTGCAGTGCATTCTTTaGCACAATAGTCTTGAAGTCGCGGCTGTGCTGCGG +
Preference number: 6 (lower is better)
Translates to: MLGISPVLQCIL*HNSLEVAAVLR
Trigger: CCGCAGCACAGCCGCGACTTCAAGACTATTGTGTCAAAGAATGCACTGCAGTACCGGGGAAATTCCCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS TCA 72 bp TGGCCACTCTGCTTCACTGAATGGTTGAGGTCTTCATaGACTCGGTCCAAAAGCCACAGCAGAAACTCCTGG +
Preference number: 6 (lower is better)
Translates to: WPLCFTEWLRSS*TRSKSHSRNSW
Trigger: CCAGGAGTTTCTGCTGTGGCTTTTGGACCGAGTTCATGAAGACCTCAACCATTCAGTGAAGCAGAGTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS TCA 72 bp ACACACCAACAGGACAATCTTGTCGCTGCCTGCTCTTaGTGTGGGAGAATCCATTTTCCCCTGCTTTGCTGC +
Preference number: 6 (lower is better)
Translates to: THQQDNLVAACS*CGRIHFPLLCC
Trigger: GCAGCAAAGCAGGGGAAAATGGATTCTCCCACATCAAGAGCAGGCAGCGACAAGATTGTCCTGTTGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS GCA 72 bp AGGCTCGGTTACACACCAACAGGACAATCTTGTCGCTaGCTGCTCTTGATGTGGGAGAATCCATTTTCCCCT +
Preference number: 6 (lower is better)
Translates to: RLGYTPTGQSCR*LLLMWENPFSP
Trigger: AGGGGAAAATGGATTCTCCCACATCAAGAGCAGGCAGCGACAAGATTGTCCTGTTGGTGTGTAACCGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS GCA 72 bp CAAGCTACCAAAGCAAGAGATGGAGACCTTGTCATCTaGTGCCTCCCCAATCTTCTCCAAGGTGGAAGCAGA +
Preference number: 6 (lower is better)
Translates to: QATKARDGDLVI*CLPNLLQGGSR
Trigger: TCTGCTTCCACCTTGGAGAAGATTGGGGAGGCAGCAGATGACAAGGTCTCCATCTCTTGCTTTGGTAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS CAA 90 bp CGACCCAACTCAGGAAAAGGAGGAAGAATGTTCGTTTATTTGCTCTaGGGCAGAGATCCAGAGGATGGAAACTGCCCTCACAGTTGGCAC +
Preference number: 6 (lower is better)
Translates to: RPNSGKGGRMFVYLL*GRDPEDGNCPHSWH
Trigger: GTGCCAACTGTGAGGGCAGTTTCCATCCTCTGGATCTCTGCCCAAGAGCAAATAAACGAACATTCTTCCTCCTTTTCCTGAGTTGGGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS CCA 72 bp CTGCACATACCACTCCCCAATCAGTCAGCTACCTACTaGACGACCCAACTCAGGAAAAGGAGGAAGAATGTT +
Preference number: 6 (lower is better)
Translates to: LHIPLPNQSATY*TTQLRKRRKNV
Trigger: AACATTCTTCCTCCTTTTCCTGAGTTGGGTCGTCCAGTAGGTAGCTGACTGATTGGGGAGTGGTATGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS CAA 90 bp ACTGGACGACCCAACTCAGGAAAAGGAGGAAGAATGTTCGTTTATTaGCTCTTGGGCAGAGATCCAGAGGATGGAAACTGCCCTCACAGT +
Preference number: 6 (lower is better)
Translates to: TGRPNSGKGGRMFVY*LLGRDPEDGNCPHS
Trigger: ACTGTGAGGGCAGTTTCCATCCTCTGGATCTCTGCCCAAGAGCAAATAAACGAACATTCTTCCTCCTTTTCCTGAGTTGGGTCGTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS TCA 72 bp AAGGGGCTGGTGACAGAAGATCTGGATGACAAACTCTaGCGCTGGACACTTCTCACAAATGGTCGAGTTGAA +
Preference number: 6 (lower is better)
Translates to: KGLVTEDLDDKL*RWTLLTNGRVE
Trigger: TTCAACTCGACCATTTGTGAGAAGTGTCCAGCGTCAGAGTTTGTCATCCAGATCTTCTGTCACCAGCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000567975.1
CDS GCA 72 bp CAAAAGGCAGTCCAAATCTTTTCCCTTGTTGCCCAGTaGAGGCTCGGTTACACACCAACAGGACAATCTTGT +
Preference number: 6 (lower is better)
Translates to: QKAVQIFSLVAQ*RLGYTPTGQSC
Trigger: ACAAGATTGTCCTGTTGGTGTGTAACCGAGCCTGCACTGGGCAACAAGGGAAAAGATTTGGACTGCCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS CAA 72 bp GGCCACACCAATCCTCATGCAGTGAGAACATTTGCCTaGATACACTACAGTGACATAGAGAGGCCTTGTGTG +
Preference number: 6 (lower is better)
Translates to: GHTNPHAVRTFA*IHYSDIERPCV
Trigger: CACACAAGGCCTCTCTATGTCACTGTAGTGTATCAAGGCAAATGTTCTCACTGCATGAGGATTGGTGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS TCA 72 bp CTTGTCTCCTTGTCCCACTCGACTACTAATTTCACATaGGCAGTGCCACCTGGTCCACAAGATTTTAATGCC +
Preference number: 6 (lower is better)
Translates to: LVSLSHSTTNFT*AVPPGPQDFNA
Trigger: GGCATTAAAATCTTGTGGACCAGGTGGCACTGCTCATGTGAAATTAGTAGTCGAGTGGGACAAGGAGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000563525.2
CDS GCA 72 bp TTTAATGCCCTTTCTACTATTGGGTGGCACAAGGGCTaGTCCTCCTGGGGCAGCAAATATGTTATTCCAACA +
Preference number: 6 (lower is better)
Translates to: FNALSTIGWHKG*SSWGSKYVIPT
Trigger: TGTTGGAATAACATATTTGCTGCCCCAGGAGGAGCAGCCCTTGTGCCACCCAATAGTAGAAAGGGCATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS GCA 72 bp CCAACTCAGGAAAAGGAGGAAGAATGTTCGTTTATTTaGTCTTGGGCAGAGATCCAGAGGATGGAAACTGCC +
Preference number: 6 (lower is better)
Translates to: PTQEKEEECSFI*SWAEIQRMETA
Trigger: GGCAGTTTCCATCCTCTGGATCTCTGCCCAAGAGCAAATAAACGAACATTCTTCCTCCTTTTCCTGAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS CAA 72 bp CCCAACTCAGGAAAAGGAGGAAGAATGTTCGTTTATTaGCTCTTGGGCAGAGATCCAGAGGATGGAAACTGC +
Preference number: 6 (lower is better)
Translates to: PNSGKGGRMFVY*LLGRDPEDGNC
Trigger: GCAGTTTCCATCCTCTGGATCTCTGCCCAAGAGCAAATAAACGAACATTCTTCCTCCTTTTCCTGAGTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563525.2
CDS GCA 72 bp CCTTGTCCCACTCGACTACTAATTTCACATGAGCAGTaGCACCTGGTCCACAAGATTTTAATGCCCTTTCTA +
Preference number: 6 (lower is better)
Translates to: PCPTRLLISHEQ*HLVHKILMPFL
Trigger: TAGAAAGGGCATTAAAATCTTGTGGACCAGGTGGCACTGCTCATGTGAAATTAGTAGTCGAGTGGGACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000563525.2
CDS CCA 72 bp TCGGGAGTCTCAAAGGCAAAAATGCAGTCGCTTTCATaGACTGTTTCCAGGTCGTCTGTATCACAAAAGGAA +
Preference number: 6 (lower is better)
Translates to: SGVSKAKMQSLS*TVSRSSVSQKE
Trigger: TTCCTTTTGTGATACAGACGACCTGGAAACAGTCCATGAAAGCGACTGCATTTTTGCCTTTGAGACTCCCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS CAA 72 bp TCTCCAAGATTTCCTTCTGCAGAAGGTCCCAAGCTATaGTCTTCTCTAAGTGCAGCACAAAAGGCAGTCCAA +
Preference number: 6 (lower is better)
Translates to: SPRFPSAEGPKL*SSLSAAQKAVQ
Trigger: TTGGACTGCCTTTTGTGCTGCACTTAGAGAAGACAATAGCTTGGGACCTTCTGCAGAAGGAAATCTTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS CAA 90 bp ATGAGGACACGTCAAAGAAGATCTGTATTGCGCTTGAAAGAGTTCTaGTACAAAAGTGCTACAGACAGGGAAAGATGGTCCCTCAGGCAT +
Preference number: 6 (lower is better)
Translates to: MRTRQRRSVLRLKEF*YKSATDRERWSLRH
Trigger: ATGCCTGAGGGACCATCTTTCCCTGTCTGTAGCACTTTTGTACAAGAACTCTTTCAAGCGCAATACAGATCTTCTTTGACGTGTCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS GCA 72 bp TTCTGCAGAAGGTCCCAAGCTATTGTCTTCTCTAAGTaGAGCACAAAAGGCAGTCCAAATCTTTTCCCTTGT +
Preference number: 6 (lower is better)
Translates to: FCRRSQAIVFSK*STKGSPNLFPC
Trigger: ACAAGGGAAAAGATTTGGACTGCCTTTTGTGCTGCACTTAGAGAAGACAATAGCTTGGGACCTTCTGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS CAA 90 bp ACTTCATCTTCTCCAAGATTTCCTTCTGCAGAAGGTCCCAAGCTATaGTCTTCTCTAAGTGCAGCACAAAAGGCAGTCCAAATCTTTTCC +
Preference number: 6 (lower is better)
Translates to: TSSSPRFPSAEGPKL*SSLSAAQKAVQIFS
Trigger: GGAAAAGATTTGGACTGCCTTTTGTGCTGCACTTAGAGAAGACAATAGCTTGGGACCTTCTGCAGAAGGAAATCTTGGAGAAGATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS CAA 72 bp CGTCAAAGAAGATCTGTATTGCGCTTGAAAGAGTTCTaGTACAAAAGTGCTACAGACAGGGAAAGATGGTCC +
Preference number: 6 (lower is better)
Translates to: RQRRSVLRLKEF*YKSATDRERWS
Trigger: GGACCATCTTTCCCTGTCTGTAGCACTTTTGTACAAGAACTCTTTCAAGCGCAATACAGATCTTCTTTGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219689.12
CDS GCA 72 bp CTGATGATGACGCTCCCTTTGCAGACGAACACTTTCTaGATCAGGAATATACTCATCCTCAGTATTTACAAA +
Preference number: 6 (lower is better)
Translates to: LMMTLPLQTNTF*IRNILILSIYK
Trigger: TTTGTAAATACTGAGGATGAGTATATTCCTGATGCAGAAAGTGTTCGTCTGCAAAGGGAGCGTCATCATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219689.12
ENST00000563525.2