RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP29 (Homo sapiens)

Ensembl gene IDs: ENSG00000131864

Ensembl transcript IDs: ENST00000254181.8, ENST00000598197.1, ENST00000600020.5, ENST00000600940.1

Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATTACCAGTGTTCTTCAAACTTTCATGAGCACTAGAATCTCCATCTaGTTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGA +
Preference number: 1 (lower is better)
Translates to: ITSVLQTFMSTRISI*LLAHTSCFCISWSR
Trigger: TCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATCAGATGGAGATTCTAGTGCTCATGAAAGTTTGAAGAACACTGGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
3UTR TCA 90 bp TACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTTCATaGGCACTAGAATCTCCATCTGATTGCTGGCTCACACCTCCTGTT +
Preference number: 1 (lower is better)
Translates to: YTKILHTLPVFFKLS*ALESPSDCWLTPPV
Trigger: AACAGGAGGTGTGAGCCAGCAATCAGATGGAGATTCTAGTGCTCATGAAAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
3UTR-3UTR CCA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGAAGCTGTTGCTGTTGCTaGTTGAAGAACAACATTTTG +
Preference number: 2 (lower is better)
Translates to: CWLTPPVSASVGLESDPRSCCCC*LKNNIL
Trigger: CAAAATGTTGTTCTTCAACCAGCAACAGCAACAGCT...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
3UTR-3UTR TCA 90 bp AGTGACCCAAGAATTTGCATTTCTAATCAGTCCCTAGCTGTTGCTGTTGCTGGTATATGCATATGCGCCTaGGTTCTGGGATCTAGGTGT +
Preference number: 2 (lower is better)
Translates to: SDPRICISNQSLAVAVAGICICA*VLGSRC
Trigger: ACACCTAGATCCCAGAACTCAGGCGCATATGCATAT...ACCAGCAACAGCAACAGCTAGGGACTGATTAGAAATGCAAATTCTTGGGTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
3UTR-3UTR TCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCTTCTCTTTGCAAGGATaGAGTACAGGATTCTCTTTG +
Preference number: 2 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVFSLQG*STGFSL
Trigger: CAAAGAGAATCCTGTACTTCATCCTTGCAAAGAGAA...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
3UTR-3UTR TCA 90 bp GTCCCTAGCTGTTGCTGTTGCTGGTTGAAGAACAACATTTTGAAAACCACCGTCTTCTCTTTGCAAGGATaGAGTACAGGATTCTCTTTG +
Preference number: 2 (lower is better)
Translates to: VPSCCCCWLKNNILKTTVFSLQG*STGFSL
Trigger: CAAAGAGAATCCTGTACTTCATCCTTGCAAAGAGAA...GACGGTGGTTTTCAAAATGTTGTTCTTCAACCAGCAACAGCAACAGCTAGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
3UTR-3UTR TCA 90 bp AGTGACCCAAGAATTTGCATTTCTAATCAGTCCCTAGCTGTTGCTGTTGCTGGTTTCCTTCATTCTGAGTaGAGTACAGGATTCTCTTTG +
Preference number: 2 (lower is better)
Translates to: SDPRICISNQSLAVAVAGFLHSE*STGFSL
Trigger: CAAAGAGAATCCTGTACTTCACTCAGAATGAAGGAA...ACCAGCAACAGCAACAGCTAGGGACTGATTAGAAATGCAAATTCTTGGGTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
3UTR-3UTR TCA 90 bp AACCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCACTTGTTCCTTCATTCTaGGTGAAGTACAGGATTCTC +
Preference number: 2 (lower is better)
Translates to: NHRQNVKSTILILQGKYALVPSF*VKYRIL
Trigger: GAGAATCCTGTACTTCACTCAGAATGAAGGAACAAG...TGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
3UTR-3UTR TCA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATTTCCTTCATTCTGAGTaGAGTACAGGATTCTCTTTG +
Preference number: 2 (lower is better)
Translates to: HRQNVKSTILILQGKYAYFLHSE*STGFSL
Trigger: CAAAGAGAATCCTGTACTTCACTCAGAATGAAGGAA...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
3UTR GCA 72 bp TCTGCATCAGTTGGTCTAGAGAGTGACCCAAGAATTTaGATTTCTAATCAGTCCCTAGCTGTTGCTGTTGCT +
Preference number: 3 (lower is better)
Translates to: SASVGLESDPRI*ISNQSLAVAVA
Trigger: AGCAACAGCAACAGCTAGGGACTGATTAGAAATGCAAATTCTTGGGTCACTCTCTAGACCAACTGATGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
3UTR TCA 72 bp CATTCTAATCTTGCAGGGAAAATATGCATATGCGCCTaGGTTCTGGGATCTAGGTGTCTGAAGCAGTTAAAA +
Preference number: 3 (lower is better)
Translates to: HSNLAGKICICA*VLGSRCLKQLK
Trigger: TTTTAACTGCTTCAGACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
3UTR TCA 72 bp ATACTCCACACATTACCAGTGTTCTTCAAACTTTCATaGGCACTAGAATCTCCATCTGATTGCTGGCTCACA +
Preference number: 3 (lower is better)
Translates to: ILHTLPVFFKLS*ALESPSDCWLT
Trigger: TGTGAGCCAGCAATCAGATGGAGATTCTAGTGCTCATGAAAGTTTGAAGAACACTGGTAATGTGTGGAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGAGGGTCACCCTGGCTGTaGTCTGGTTCCAATGGAGAT +
Preference number: 4 (lower is better)
Translates to: CWLTPPVSASVGLESDPRGSPWL*SGSNGD
Trigger: ATCTCCATTGGAACCAGAGCACAGCCAGGGTGACCC...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGACAGCTTCCTAACACCTaGAGGTGGTGCCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: CWLTPPVSASVGLESDPRQLPNT*RWCLLK
Trigger: CTTCAGCAGGCACCACCTCCAGGTGTTAGGAAGCTG...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGATCCATAGCGCTATGTTaGCCAGGCTGGTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: CWLTPPVSASVGLESDPRSIALC*PGWSPT
Trigger: AGTTGGAGACCAGCCTGGGCAACATAGCGCTATGGA...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254181.8
CDS-3UTR CCA 90 bp CCATCTGATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTTTGGAGAGCTGTCCATaGTCACACTGCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PSDCWLTPPVSASVGLESLESCP*SHCRQS
Trigger: GCTCTGCCTGCAGTGTGACCATGGACAGCTCTCCAA...ACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATCAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254181.8
CDS-3UTR CCA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGAGGGGAGCTCCCGATATaGCTGACAACACTGATGAGT +
Preference number: 4 (lower is better)
Translates to: CWLTPPVSASVGLESDPRGELPI*LTTLMS
Trigger: ACTCATCAGTGTTGTCAGCCATATCGGGAGCTCCCC...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CCATCTGATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTTGCAGTTGCTGTGAATaGGAGTCAAGAGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: PSDCWLTPPVSASVGLESCSCCE*ESRGTW
Trigger: CCAGGTGCCTCTTGACTCTCATTCACAGCAACTGCA...ACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATCAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCTCCCTGGTCCATCAGTaGGTCAGCCACTGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVSLVHQ*VSHWKL
Trigger: GAGCTTCCAGTGGCTGACTCACTGATGGACCAGGGA...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp GTCCCTAGCTGTTGCTGTTGCTGGTTGAAGAACAACATTTTGAAAACCACCGTCGCACCTGGGCTTTGTTaGATCTTGGGTCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: VPSCCCCWLKNNILKTTVAPGLC*ILGHPG
Trigger: GCCAGGGTGACCCAAGATGCAACAAAGCCCAGGTGC...GACGGTGGTTTTCAAAATGTTGTTCTTCAACCAGCAACAGCAACAGCTAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCGCACCTGGGCTTTGTTaGATCTTGGGTCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVAPGLC*ILGHPG
Trigger: GCCAGGGTGACCCAAGATGCAACAAAGCCCAGGTGC...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp GATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGGTGTTTCCCAAATTaGGGAACCCCTGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: DCWLTPPVSASVGLESDPRCFPN*GTPAAV
Trigger: AACTGCAGCAGGGGTTCCCCAATTTGGGAAACACCT...TGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp GATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGAGAAATGTCTCCCTaGTCCATCAGTGAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: DCWLTPPVSASVGLESDPREMSP*SISESA
Trigger: GGCTGACTCACTGATGGACCAGGGAGACATTTCTCT...TGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CCATCTGATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTTCCCATGGGACACCTTaGGTGAGTAAGTCATCAGCA +
Preference number: 4 (lower is better)
Translates to: PSDCWLTPPVSASVGLESSHGTP*VSKSSA
Trigger: TGCTGATGACTTACTCACTCAAGGTGTCCCATGGGA...ACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATCAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGAATATGCATATGCGCCTaGGTTCTGGGATCTAGGTGT +
Preference number: 4 (lower is better)
Translates to: CWLTPPVSASVGLESDPRICICA*VLGSRC
Trigger: ACACCTAGATCCCAGAACTCAGGCGCATATGCATAT...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp GTCCCTAGCTGTTGCTGTTGCTGGTTGAAGAACAACATTTTGAAAACCACCGTCTGTCCATGGTCACACTaGAGGCAGAGCTCTGACTGC +
Preference number: 4 (lower is better)
Translates to: VPSCCCCWLKNNILKTTVCPWSH*RQSSDC
Trigger: GCAGTCAGAGCTCTGCCTGCAGTGTGACCATGGACA...GACGGTGGTTTTCAAAATGTTGTTCTTCAACCAGCAACAGCAACAGCTAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254181.8
CDS-3UTR CCA 90 bp AGTGACCCAAGAATTTGCATTTCTAATCAGTCCCTAGCTGTTGCTGTTGCTGGTGGAGGTACAGTTCCTTaGACTTCCGGCTCCCATGGC +
Preference number: 4 (lower is better)
Translates to: SDPRICISNQSLAVAVAGGGTVP*TSGSHG
Trigger: GCCATGGGAGCCGGAAGTCCAAGGAACTGTACCTCC...ACCAGCAACAGCAACAGCTAGGGACTGATTAGAAATGCAAATTCTTGGGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254181.8
CDS-3UTR CCA 90 bp CCATCTGATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTACCCTGGCTGTGCTCTaGTTCCAATGGAGATGTCAA +
Preference number: 4 (lower is better)
Translates to: PSDCWLTPPVSASVGLESTLAVL*FQWRCQ
Trigger: TTGACATCTCCATTGGAACCAGAGCACAGCCAGGGT...ACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATCAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATACTGCAGGCAGAGCTCTaGCTGCCACGGCTGTTAAGT +
Preference number: 4 (lower is better)
Translates to: PPSKREEHHSNLAGKICILQAEL*LPRLLS
Trigger: ACTTAACAGCCGTGGCAGTCAGAGCTCTGCCTGCAG...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254181.8
CDS-3UTR TCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCTGCAGTTGCTGTGAATaGGAGTCAAGAGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVCSCCE*ESRGTW
Trigger: CCAGGTGCCTCTTGACTCTCATTCACAGCAACTGCA...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGAGTGTCAATGGGCTGTTaGTCTCAGAAATCATCTCCT +
Preference number: 4 (lower is better)
Translates to: CWLTPPVSASVGLESDPRVSMGC*SQKSSP
Trigger: AGGAGATGATTTCTGAGATCAACAGCCCATTGACAC...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCGCTGATGTAATGGCCTaGATTTGGGGAGCTCCCGAT +
Preference number: 4 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVADVMA*IWGAPD
Trigger: ATCGGGAGCTCCCCAAATTCAGGCCATTACATCAGC...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp GATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAATAGATCGTTGTATGTaGACCAGGCCTGCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: DCWLTPPVSASVGLESDPIDRCM*TRPASE
Trigger: TTCAGAAGCAGGCCTGGTTCACATACAACGATCTAT...TGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGACTCCTTTTCACCGATTaGCCTATCTCTAAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: CWLTPPVSASVGLESDPRLLFTD*PISKVD
Trigger: GTCCACTTTAGAGATAGGGCAATCGGTGAAAAGGAG...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp GATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCATTGGCATTGAGAGTCTaGGTTGCAAGAACAGTCTCA +
Preference number: 4 (lower is better)
Translates to: DCWLTPPVSASVGLESDPLALRV*VARTVS
Trigger: TGAGACTGTTCTTGCAACCCAGACTCTCAATGCCAA...TGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCGAGTCAAGAGGCACCTaGGCTTTGTTGCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVESRGT*ALLHLG
Trigger: CCCAAGATGCAACAAAGCCCAGGTGCCTCTTGACTC...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp CCATCTGATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTTCTCCACAGTCTCTCTaGAATCTTTGTAGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: PSDCWLTPPVSASVGLESSPQSL*NLCRSA
Trigger: TGCCGACCTACAAAGATTCCAGAGAGACTGTGGAGA...ACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATCAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp CCATCTGATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTTCCTCAATACACTGCTaGAGCTGTTCAGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: PSDCWLTPPVSASVGLESSSIHC*SCSAIP
Trigger: AGGAATGGCTGAACAGCTCCAGCAGTGTATTGAGGA...ACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATCAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp GTCCCTAGCTGTTGCTGTTGCTGGTTGAAGAACAACATTTTGAAAACCACCGTCGGGGAGCTCCCGATATaGCTGACAACACTGATGAGT +
Preference number: 4 (lower is better)
Translates to: VPSCCCCWLKNNILKTTVGELPI*LTTLMS
Trigger: ACTCATCAGTGTTGTCAGCCATATCGGGAGCTCCCC...GACGGTGGTTTTCAAAATGTTGTTCTTCAACCAGCAACAGCAACAGCTAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGAAGTCATACACATCGCTaGTGTAATGGCCTGAATTTG +
Preference number: 4 (lower is better)
Translates to: CWLTPPVSASVGLESDPRSHTHR*CNGLNL
Trigger: CAAATTCAGGCCATTACATCAGCGATGTGTATGACT...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCAACCAGGCCTGCTTCTaGAAGTCATACACATCGCTG +
Preference number: 4 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVNQACF*KSYTSL
Trigger: CAGCGATGTGTATGACTTTCAGAAGCAGGCCTGGTT...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCGAGATCTTGCTATGTTaGCCAGGGTGGTCCCAAACT +
Preference number: 4 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVEILLC*PGWSQT
Trigger: AGTTTGGGACCACCCTGGGCAACATAGCAAGATCTC...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254181.8
CDS-3UTR GCA 90 bp GTCCCTAGCTGTTGCTGTTGCTGGTTGAAGAACAACATTTTGAAAACCACCGTCATGCTGCTCTTGGCTTaGATCTCCACAGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VPSCCCCWLKNNILKTTVMLLLA*ISTVSL
Trigger: CAGAGAGACTGTGGAGATGCAAGCCAAGAGCAGCAT...GACGGTGGTTTTCAAAATGTTGTTCTTCAACCAGCAACAGCAACAGCTAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp GATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAGTCATCCCAGTCTTCTaGCTCCAAATTTGGATGAAT +
Preference number: 4 (lower is better)
Translates to: DCWLTPPVSASVGLESDPVIPVF*LQIWMN
Trigger: ATTCATCCAAATTTGGAGCCAGAAGACTGGGATGAC...TGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGAAAACAAACACTTTGGTaGCAGCACTACCAACATGCA +
Preference number: 4 (lower is better)
Translates to: CWLTPPVSASVGLESDPRKQTLW*QHYQHA
Trigger: TGCATGTTGGTAGTGCTGCCACCAAAGTGTTTGTTT...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCAGAGAAATGTCTCCCTaGTCCATCAGTGAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVREMSP*SISESA
Trigger: GGCTGACTCACTGATGGACCAGGGAGACATTTCTCT...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp GATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAATACTTCTGAAGTTCTaGATGTTGAGGCACCTCTTG +
Preference number: 4 (lower is better)
Translates to: DCWLTPPVSASVGLESDPILLKF*MLRHLL
Trigger: CAAGAGGTGCCTCAACATCCAGAACTTCAGAAGTAT...TGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CCATCTGATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTACAGTTGGTATTGAATaGAGGCCCGAGTTTCAAATC +
Preference number: 4 (lower is better)
Translates to: PSDCWLTPPVSASVGLESTVGIE*RPEFQI
Trigger: GATTTGAAACTCGGGCCTTCATTCAATACCAACTGT...ACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATCAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp AACCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCACTGCTGCAGTTGCTGTaGATGAGAGTCAAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: NHRQNVKSTILILQGKYALLQLL*MRVKRH
Trigger: GTGCCTCTTGACTCTCATTCACAGCAACTGCAGCAG...TGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGAACCTTGAGAACAGCATaGCCACAAGCTTTACAAATA +
Preference number: 4 (lower is better)
Translates to: CWLTPPVSASVGLESDPRTLRTA*PQALQI
Trigger: TATTTGTAAAGCTTGTGGTCATGCTGTTCTCAAGGT...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCGGAGGTGGTGCCTGCTaGAGAAATTCATCTATGATG +
Preference number: 4 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVGGGAC*RNSSMM
Trigger: CATCATAGATGAATTTCTTCAGCAGGCACCACCTCC...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp GATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCACTTAATTCTGTAGACTaGTTGAGGGTCTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: DCWLTPPVSASVGLESDPLNSVD*LRVSSV
Trigger: TACAGAAGAGACCCTCAATCAGTCTACAGAATTAAG...TGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CCATCTGATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTAGTCATACACATCGCTaGTGTAATGGCCTGAATTTG +
Preference number: 4 (lower is better)
Translates to: PSDCWLTPPVSASVGLESSHTHR*CNGLNL
Trigger: CAAATTCAGGCCATTACATCAGCGATGTGTATGACT...ACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATCAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGATTCTCTTTGCAAGGATaGAGTACAGGATTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: CWLTPPVSASVGLESDPRFSLQG*STGFSL
Trigger: CAAAGAGAATCCTGTACTTCATCCTTGCAAAGAGAA...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CCATCTGATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTAGTTGGTCTAGAGAGTaGCCCAAGAATTTGCATTTC +
Preference number: 4 (lower is better)
Translates to: PSDCWLTPPVSASVGLESSWSRE*PKNLHF
Trigger: GAAATGCAAATTCTTGGGTCACTCTCTAGACCAACT...ACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATCAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATGGGTCACCCTGGCTGTaGTCTGGTTCCAATGGAGAT +
Preference number: 4 (lower is better)
Translates to: HRQNVKSTILILQGKYAYGSPWL*SGSNGD
Trigger: ATCTCCATTGGAACCAGAGCACAGCCAGGGTGACCC...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp AGTGACCCAAGAATTTGCATTTCTAATCAGTCCCTAGCTGTTGCTGTTGCTGGTATGCTGCTCTTGGCTTaGATCTCCACAGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SDPRICISNQSLAVAVAGMLLLA*ISTVSL
Trigger: CAGAGAGACTGTGGAGATGCAAGCCAAGAGCAGCAT...ACCAGCAACAGCAACAGCTAGGGACTGATTAGAAATGCAAATTCTTGGGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATAGTTGTCAGAACCCAGTaGCCCAAGGTGATTCAGGTC +
Preference number: 4 (lower is better)
Translates to: PPSKREEHHSNLAGKICIVVRTQ*PKVIQV
Trigger: GACCTGAATCACCTTGGGGCACTGGGTTCTGACAAC...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp AACCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCACATCTTGGGTCACCCTaGCTGTGCTCTGGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: NHRQNVKSTILILQGKYAHLGSP*LCSGSN
Trigger: ATTGGAACCAGAGCACAGCCAGGGTGACCCAAGATG...TGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CCATCTGATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTACCTTGAGAACAGCATaGCCACAAGCTTTACAAATA +
Preference number: 4 (lower is better)
Translates to: PSDCWLTPPVSASVGLESTLRTA*PQALQI
Trigger: TATTTGTAAAGCTTGTGGTCATGCTGTTCTCAAGGT...ACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATCAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGATTCTGCTTACACATCTaGCAGTTATATTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: CWLTPPVSASVGLESDPRFCLHI*QLYSSS
Trigger: AGAGCTTGAATATAACTGTCAGATGTGTAAGCAGAA...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp AGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTTCTCCCTGGTCCATCAGTaGGTCAGCCACTGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SSKIHQDTPHITSVLQTFSLVHQ*VSHWKL
Trigger: GAGCTTCCAGTGGCTGACTCACTGATGGACCAGGGA...GAAAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp GATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAGAAGAAATTCATCTATaGTGCTCTCCTCAATACACT +
Preference number: 4 (lower is better)
Translates to: DCWLTPPVSASVGLESDPEEIHL*CSPQYT
Trigger: AGTGTATTGAGGAGAGCATCATAGATGAATTTCTTC...TGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATGCTGATGTAATGGCCTaGATTTGGGGAGCTCCCGAT +
Preference number: 4 (lower is better)
Translates to: HRQNVKSTILILQGKYAYADVMA*IWGAPD
Trigger: ATCGGGAGCTCCCCAAATTCAGGCCATTACATCAGC...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp AACCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCAAACCAGGCCTGCTTCTaGAAGTCATACACATCGCTG +
Preference number: 4 (lower is better)
Translates to: NHRQNVKSTILILQGKYANQACF*KSYTSL
Trigger: CAGCGATGTGTATGACTTTCAGAAGCAGGCCTGGTT...TGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCATAGATCGTTGTATGTaGACCAGGCCTGCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVIDRCM*TRPASE
Trigger: TTCAGAAGCAGGCCTGGTTCACATACAACGATCTAT...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATAAAGATATACCCAGAGTaGAGCCTCGCCTCCTGCATT +
Preference number: 4 (lower is better)
Translates to: PPSKREEHHSNLAGKICIKIYPE*SLASCI
Trigger: AATGCAGGAGGCGAGGCTTCACTCTGGGTATATCTT...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGATTCTTCAAACTTTCATaGGCACTAGAATCTCCATCT +
Preference number: 4 (lower is better)
Translates to: CWLTPPVSASVGLESDPRFFKLS*ALESPS
Trigger: AGATGGAGATTCTAGTGCTCATGAAAGTTTGAAGAA...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATGTTGTCAGAACCCAGTaGCCCAAGGTGATTCAGGTC +
Preference number: 4 (lower is better)
Translates to: HRQNVKSTILILQGKYAYVVRTQ*PKVIQV
Trigger: GACCTGAATCACCTTGGGGCACTGGGTTCTGACAAC...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATAACCCTGGCTGTGCTCTaGTTCCAATGGAGATGTCAA +
Preference number: 4 (lower is better)
Translates to: PPSKREEHHSNLAGKICITLAVL*FQWRCQ
Trigger: TTGACATCTCCATTGGAACCAGAGCACAGCCAGGGT...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATCATCTTGGGTCACCCTaGCTGTGCTCTGGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: HRQNVKSTILILQGKYAYHLGSP*LCSGSN
Trigger: ATTGGAACCAGAGCACAGCCAGGGTGACCCAAGATG...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp CCATCTGATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTTTCAAAGCAAGCAGCTaGGTCAAGGTCATAATAAGA +
Preference number: 4 (lower is better)
Translates to: PSDCWLTPPVSASVGLESFKASS*VKVIIR
Trigger: TCTTATTATGACCTTGACCCAGCTGCTTGCTTTGAA...ACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATCAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp AGTGACCCAAGAATTTGCATTTCTAATCAGTCCCTAGCTGTTGCTGTTGCTGGTTCCTCAATACACTGCTaGAGCTGTTCAGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: SDPRICISNQSLAVAVAGSSIHC*SCSAIP
Trigger: AGGAATGGCTGAACAGCTCCAGCAGTGTATTGAGGA...ACCAGCAACAGCAACAGCTAGGGACTGATTAGAAATGCAAATTCTTGGGTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCGAGAGCTGTTCTGGGTaGGTGGATGATAATTCTTTT +
Preference number: 4 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVESCSG*VDDNSF
Trigger: AAAAGAATTATCATCCACTCACCCAGAACAGCTCTC...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254181.8
CDS-3UTR TCA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATTCCCATGGGACACCTTaGGTGAGTAAGTCATCAGCA +
Preference number: 4 (lower is better)
Translates to: HRQNVKSTILILQGKYAYSHGTP*VSKSSA
Trigger: TGCTGATGACTTACTCACTCAAGGTGTCCCATGGGA...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCGCAACCAAGCATTGTTaGAGCTATAGCGTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVATKHC*SYSVSD
Trigger: ATCTGAAACGCTATAGCTTCAACAATGCTTGGTTGC...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATAAGATATACCCAGAGTaGAGCCTCGCCTCCTGCATT +
Preference number: 4 (lower is better)
Translates to: HRQNVKSTILILQGKYAYKIYPE*SLASCI
Trigger: AATGCAGGAGGCGAGGCTTCACTCTGGGTATATCTT...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATTTTGCAAGGATGAAGTaGGGCCGAGTGAGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: HRQNVKSTILILQGKYAYFARMK*GRVSLS
Trigger: TGACAGACTCACTCGGCCTCACTTCATCCTTGCAAA...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp AACCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCAACATTTCCCAACAGGTaGACTACTGCTCAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: NHRQNVKSTILILQGKYATFPNR*TTAQGK
Trigger: CTTCCCTTGAGCAGTAGTGCACCTGTTGGGAAATGT...TGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATACTCTCCTCAATACACTaGTGGAGCTGTTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: PPSKREEHHSNLAGKICILSSIH*WSCSAI
Trigger: AATGGCTGAACAGCTCCAGCAGTGTATTGAGGAGAG...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATAAACACCTGGAGGTGGTaGCTGCTGAAGAAATTCATC +
Preference number: 4 (lower is better)
Translates to: PPSKREEHHSNLAGKICINTWRW*LLKKFI
Trigger: GATGAATTTCTTCAGCAGGCACCACCTCCAGGTGTT...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp CCATCTGATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTTTCTGGCTCCAAATTTaGATGAATCCACATACCTTT +
Preference number: 4 (lower is better)
Translates to: PSDCWLTPPVSASVGLESFWLQI*MNPHTF
Trigger: AAAGGTATGTGGATTCATCCAAATTTGGAGCCAGAA...ACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATCAGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCGTCATCCCAGTCTTCTaGCTCCAAATTTGGATGAAT +
Preference number: 4 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVVIPVF*LQIWMN
Trigger: ATTCATCCAAATTTGGAGCCAGAAGACTGGGATGAC...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCAAACAAACACTTTGGTaGCAGCACTACCAACATGCA +
Preference number: 4 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVKQTLW*QHYQHA
Trigger: TGCATGTTGGTAGTGCTGCCACCAAAGTGTTTGTTT...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp AACCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCAGAACCAGGGAATCACTaGATTCTGAGGTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: NHRQNVKSTILILQGKYAEPGNH*ILRSAS
Trigger: TGAAGCTGACCTCAGAATCCAGTGATTCCCTGGTTC...TGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATCTCCACAGTCTCTCTaGAATCTTTGTAGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: PPSKREEHHSNLAGKICISPQSL*NLCRSA
Trigger: TGCCGACCTACAAAGATTCCAGAGAGACTGTGGAGA...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTCAGCTTCCTAACACCTaGAGGTGGTGCCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLQLPNT*RWCLLK
Trigger: CTTCAGCAGGCACCACCTCCAGGTGTTAGGAAGCTG...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp AGTGACCCAAGAATTTGCATTTCTAATCAGTCCCTAGCTGTTGCTGTTGCTGGTTCTTCTGTATGTTCCTaGGCATCCAGCTTCCTAACA +
Preference number: 4 (lower is better)
Translates to: SDPRICISNQSLAVAVAGSSVCS*ASSFLT
Trigger: TGTTAGGAAGCTGGATGCCCAGGAACATACAGAAGA...ACCAGCAACAGCAACAGCTAGGGACTGATTAGAAATGCAAATTCTTGGGTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp AGTGACCCAAGAATTTGCATTTCTAATCAGTCCCTAGCTGTTGCTGTTGCTGGTCATTACAGTTGGTATTaGATGAAGGCCCGAGTTTCA +
Preference number: 4 (lower is better)
Translates to: SDPRICISNQSLAVAVAGHYSWY*MKARVS
Trigger: TGAAACTCGGGCCTTCATTCAATACCAACTGTAATG...ACCAGCAACAGCAACAGCTAGGGACTGATTAGAAATGCAAATTCTTGGGTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTCTGCTGCAGTTGCTGTaGATGAGAGTCAAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLLLQLL*MRVKRH
Trigger: GTGCCTCTTGACTCTCATTCACAGCAACTGCAGCAG...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCATGCATTTGTGGAGATaGATTTTCATCCCCACATTC +
Preference number: 4 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVMHLWR*IFIPTF
Trigger: GAATGTGGGGATGAAAATTCATCTCCACAAATGCAT...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATAGTGTCAATGGGCTGTTaGTCTCAGAAATCATCTCCT +
Preference number: 4 (lower is better)
Translates to: PPSKREEHHSNLAGKICIVSMGC*SQKSSP
Trigger: AGGAGATGATTTCTGAGATCAACAGCCCATTGACAC...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATTGTTCAGCCATTCCTTaGGATCCTTCTGGAATCCTG +
Preference number: 4 (lower is better)
Translates to: HRQNVKSTILILQGKYAYCSAIP*DPSGIL
Trigger: CAGGATTCCAGAAGGATCTCAAGGAATGGCTGAACA...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATGGAGGTGGTGCCTGCTaGAGAAATTCATCTATGATG +
Preference number: 4 (lower is better)
Translates to: HRQNVKSTILILQGKYAYGGGAC*RNSSMM
Trigger: CATCATAGATGAATTTCTTCAGCAGGCACCACCTCC...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp GTCCCTAGCTGTTGCTGTTGCTGGTTGAAGAACAACATTTTGAAAACCACCGTCCTTAATTCTGTAGACTaGTTGAGGGTCTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: VPSCCCCWLKNNILKTTVLNSVD*LRVSSV
Trigger: TACAGAAGAGACCCTCAATCAGTCTACAGAATTAAG...GACGGTGGTTTTCAAAATGTTGTTCTTCAACCAGCAACAGCAACAGCTAGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp GTCCCTAGCTGTTGCTGTTGCTGGTTGAAGAACAACATTTTGAAAACCACCGTCTTCCTTCATTCTGAGTaGAGTACAGGATTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: VPSCCCCWLKNNILKTTVFLHSE*STGFSL
Trigger: CAAAGAGAATCCTGTACTTCACTCAGAATGAAGGAA...GACGGTGGTTTTCAAAATGTTGTTCTTCAACCAGCAACAGCAACAGCTAGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp AGTGACCCAAGAATTTGCATTTCTAATCAGTCCCTAGCTGTTGCTGTTGCTGGTCTTGTTCCTTCATTCTaGGTGAAGTACAGGATTCTC +
Preference number: 4 (lower is better)
Translates to: SDPRICISNQSLAVAVAGLVPSF*VKYRIL
Trigger: GAGAATCCTGTACTTCACTCAGAATGAAGGAACAAG...ACCAGCAACAGCAACAGCTAGGGACTGATTAGAAATGCAAATTCTTGGGTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp CCATCTGATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTATTTCCTTTTGTCTTTaGACTGTTTCAATGAGAGCT +
Preference number: 4 (lower is better)
Translates to: PSDCWLTPPVSASVGLESISFCL*TVSMRA
Trigger: AGCTCTCATTGAAACAGTGCAAAGACAAAAGGAAAT...ACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATCAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCCCTTCAGCATATTCCTaGTTTCAAACACACTCCAAT +
Preference number: 4 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVPSAYS*FQTHSN
Trigger: ATTGGAGTGTGTTTGAAAGCAGGAATATGCTGAAGG...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCGCAGCACTACCAACATaGATTTGTGGAGATGAATTT +
Preference number: 4 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVAALPT*ICGDEF
Trigger: AAATTCATCTCCACAAATGCATGTTGGTAGTGCTGC...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCAGCCTACTAAATGTATaGCTTGCAACACAACTCTTC +
Preference number: 4 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVSLLNV*LATQLF
Trigger: GAAGAGTTGTGTTGCAAGGCATACATTTAGTAGGCT...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp CCATCTGATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTCATCTTCTGATAACTTaGCTTGTTACAAATGCTGTA +
Preference number: 4 (lower is better)
Translates to: PSDCWLTPPVSASVGLESHLLIT*LVTNAV
Trigger: TACAGCATTTGTAACAAGCCAAGTTATCAGAAGATG...ACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATCAGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp AACCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATTGGCATTGAGAGTCTaGGTTGCAAGAACAGTCTCA +
Preference number: 4 (lower is better)
Translates to: NHRQNVKSTILILQGKYALALRV*VARTVS
Trigger: TGAGACTGTTCTTGCAACCCAGACTCTCAATGCCAA...TGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp GTCCCTAGCTGTTGCTGTTGCTGGTTGAAGAACAACATTTTGAAAACCACCGTCAATGGACAAAGGAAGTaGTTTTGTTTCTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: VPSCCCCWLKNNILKTTVNGQRK*FCFLVQ
Trigger: CTGCACCAAGAAACAAAACCACTTCCTTTGTCCATT...GACGGTGGTTTTCAAAATGTTGTTCTTCAACCAGCAACAGCAACAGCTAGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp AGTGACCCAAGAATTTGCATTTCTAATCAGTCCCTAGCTGTTGCTGTTGCTGGTGCCCTATCTCTAAAGTaGACCAATTCTGACTCTAGT +
Preference number: 4 (lower is better)
Translates to: SDPRICISNQSLAVAVAGALSLK*TNSDSS
Trigger: ACTAGAGTCAGAATTGGTCCACTTTAGAGATAGGGC...ACCAGCAACAGCAACAGCTAGGGACTGATTAGAAATGCAAATTCTTGGGTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATCTTCTGTATGTTCCTaGGCATCCAGCTTCCTAACA +
Preference number: 4 (lower is better)
Translates to: PPSKREEHHSNLAGKICISSVCS*ASSFLT
Trigger: TGTTAGGAAGCTGGATGCCCAGGAACATACAGAAGA...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATAGGCTCCAAATTTGGATaGATCCACATACCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: PPSKREEHHSNLAGKICIGSKFG*IHIPLE
Trigger: CTCTAAAGGTATGTGGATTCATCCAAATTTGGAGCC...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATTCAGAAATCATCTCCTaGGAGACTTCCAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: HRQNVKSTILILQGKYAYSEIIS*ETSRTS
Trigger: TGAAGTCCTGGAAGTCTCTCAGGAGATGATTTCTGA...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp AGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTTCTTTGCAAGGATGAAGTaGGGCCGAGTGAGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SSKIHQDTPHITSVLQTFFARMK*GRVSLS
Trigger: TGACAGACTCACTCGGCCTCACTTCATCCTTGCAAA...GAAAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp AGTGACCCAAGAATTTGCATTTCTAATCAGTCCCTAGCTGTTGCTGTTGCTGGTCCTTCAGCATATTCCTaGTTTCAAACACACTCCAAT +
Preference number: 4 (lower is better)
Translates to: SDPRICISNQSLAVAVAGPSAYS*FQTHSN
Trigger: ATTGGAGTGTGTTTGAAAGCAGGAATATGCTGAAGG...ACCAGCAACAGCAACAGCTAGGGACTGATTAGAAATGCAAATTCTTGGGTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCAGTGACCCAAGAATTTaGATTTCTAATCAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVSDPRI*ISNQSL
Trigger: TAGGGACTGATTAGAAATGCAAATTCTTGGGTCACT...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp AGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTTCGCCTTCCAAAGTGCCTaGATTAGACTCCATAGCGCT +
Preference number: 4 (lower is better)
Translates to: SSKIHQDTPHITSVLQTFAFQSA*IRLHSA
Trigger: AGCGCTATGGAGTCTAATCCAGGCACTTTGGAAGGC...GAAAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254181.8
CDS-3UTR CCA 90 bp AGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTTCAGGTGTTTCCCAAATTaGGGAACCCCTGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SSKIHQDTPHITSVLQTFRCFPN*GTPAAV
Trigger: AACTGCAGCAGGGGTTCCCCAATTTGGGAAACACCT...GAAAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATACAGTTGGTATTGAATaGAGGCCCGAGTTTCAAATC +
Preference number: 4 (lower is better)
Translates to: HRQNVKSTILILQGKYAYTVGIE*RPEFQI
Trigger: GATTTGAAACTCGGGCCTTCATTCAATACCAACTGT...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp AGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTTCTGTTCAGCCATTCCTTaGGATCCTTCTGGAATCCTG +
Preference number: 4 (lower is better)
Translates to: SSKIHQDTPHITSVLQTFCSAIP*DPSGIL
Trigger: CAGGATTCCAGAAGGATCTCAAGGAATGGCTGAACA...GAAAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATTCAGGTCAGCCTTTTaGAGTCTTAATTCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: PPSKREEHHSNLAGKICIFRSAF*SLNSVD
Trigger: GTCTACAGAATTAAGACTTCAAAAGGCTGACCTGAA...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp AACCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATTCTCTTTGCAAGGATaGAGTACAGGATTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: NHRQNVKSTILILQGKYAFSLQG*STGFSL
Trigger: CAAAGAGAATCCTGTACTTCATCCTTGCAAAGAGAA...TGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATTCCTTCATTCTGAGTaGAGTACAGGATTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: PPSKREEHHSNLAGKICIFLHSE*STGFSL
Trigger: CAAAGAGAATCCTGTACTTCACTCAGAATGAAGGAA...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATAGTTGGTCTAGAGAGTaGCCCAAGAATTTGCATTTC +
Preference number: 4 (lower is better)
Translates to: HRQNVKSTILILQGKYAYSWSRE*PKNLHF
Trigger: GAAATGCAAATTCTTGGGTCACTCTCTAGACCAACT...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATAGCAGCACTACCAACATaGATTTGTGGAGATGAATTT +
Preference number: 4 (lower is better)
Translates to: PPSKREEHHSNLAGKICIAALPT*ICGDEF
Trigger: AAATTCATCTCCACAAATGCATGTTGGTAGTGCTGC...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp AGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTTCACATTTCCCAACAGGTaGACTACTGCTCAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SSKIHQDTPHITSVLQTFTFPNR*TTAQGK
Trigger: CTTCCCTTGAGCAGTAGTGCACCTGTTGGGAAATGT...GAAAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTCTCTCCTCAATACACTaGTGGAGCTGTTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLLSSIH*WSCSAI
Trigger: AATGGCTGAACAGCTCCAGCAGTGTATTGAGGAGAG...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTAACACCTGGAGGTGGTaGCTGCTGAAGAAATTCATC +
Preference number: 4 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLNTWRW*LLKKFI
Trigger: GATGAATTTCTTCAGCAGGCACCACCTCCAGGTGTT...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATTCAAAGCAAGCAGCTaGGTCAAGGTCATAATAAGA +
Preference number: 4 (lower is better)
Translates to: PPSKREEHHSNLAGKICIFKASS*VKVIIR
Trigger: TCTTATTATGACCTTGACCCAGCTGCTTGCTTTGAA...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATAGTGGTTTTGTTTCTTaGTGCAGGTTGATGGAGAGA +
Preference number: 4 (lower is better)
Translates to: HRQNVKSTILILQGKYAYSGFVS*CRLMER
Trigger: TCTCTCCATCAACCTGCACCAAGAAACAAAACCACT...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp AGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTTCGAACCAGGGAATCACTaGATTCTGAGGTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SSKIHQDTPHITSVLQTFEPGNH*ILRSAS
Trigger: TGAAGCTGACCTCAGAATCCAGTGATTCCCTGGTTC...GAAAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp AACCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCAAGCTGTTGCTGTTGCTaGTTGAAGAACAACATTTTG +
Preference number: 4 (lower is better)
Translates to: NHRQNVKSTILILQGKYASCCCC*LKNNIL
Trigger: CAAAATGTTGTTCTTCAACCAGCAACAGCAACAGCT...TGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp AGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTTCTCAGAAATCATCTCCTaGGAGACTTCCAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: SSKIHQDTPHITSVLQTFSEIIS*ETSRTS
Trigger: TGAAGTCCTGGAAGTCTCTCAGGAGATGATTTCTGA...GAAAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATAGAAGAAATTCATCTATaGTGCTCTCCTCAATACACT +
Preference number: 4 (lower is better)
Translates to: PPSKREEHHSNLAGKICIEEIHL*CSPQYT
Trigger: AGTGTATTGAGGAGAGCATCATAGATGAATTTCTTC...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp AACCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCAACTAAATGTATGCCTTaGAACACAACTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: NHRQNVKSTILILQGKYATKCMP*NTTLLL
Trigger: AAGCAGAAGAGTTGTGTTGCAAGGCATACATTTAGT...TGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATAACTAAATGTATGCCTTaGAACACAACTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PPSKREEHHSNLAGKICITKCMP*NTTLLL
Trigger: AAGCAGAAGAGTTGTGTTGCAAGGCATACATTTAGT...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTCTCCTTTTCACCGATTaGCCTATCTCTAAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLLLFTD*PISKVD
Trigger: GTCCACTTTAGAGATAGGGCAATCGGTGAAAAGGAG...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATTCTGGCTCCAAATTTaGATGAATCCACATACCTTT +
Preference number: 4 (lower is better)
Translates to: PPSKREEHHSNLAGKICIFWLQI*MNPHTF
Trigger: AAAGGTATGTGGATTCATCCAAATTTGGAGCCAGAA...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp AGTGACCCAAGAATTTGCATTTCTAATCAGTCCCTAGCTGTTGCTGTTGCTGGTCATCATCAGATTTCATaGGTTGCTGAGATTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SDPRICISNQSLAVAVAGHHQIS*VAEICF
Trigger: AAAACAAATCTCAGCAACCCATGAAATCTGATGATG...ACCAGCAACAGCAACAGCTAGGGACTGATTAGAAATGCAAATTCTTGGGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp AGTGACCCAAGAATTTGCATTTCTAATCAGTCCCTAGCTGTTGCTGTTGCTGGTCTAAAGAATTCTGAATaGACAAAGGAAGTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SDPRICISNQSLAVAVAGLKNSE*TKEVVL
Trigger: CAAAACCACTTCCTTTGTCCATTCAGAATTCTTTAG...ACCAGCAACAGCAACAGCTAGGGACTGATTAGAAATGCAAATTCTTGGGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp AGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTTCGGCTCCAAATTTGGATaGATCCACATACCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: SSKIHQDTPHITSVLQTFGSKFG*IHIPLE
Trigger: CTCTAAAGGTATGTGGATTCATCCAAATTTGGAGCC...GAAAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTCATTACAGTTGGTATTaGATGAAGGCCCGAGTTTCA +
Preference number: 4 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLHYSWY*MKARVS
Trigger: TGAAACTCGGGCCTTCATTCAATACCAACTGTAATG...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATTTCTGCTTACACATCTaGCAGTTATATTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: HRQNVKSTILILQGKYAYFCLHI*QLYSSS
Trigger: AGAGCTTGAATATAACTGTCAGATGTGTAAGCAGAA...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTCTTGTTCCTTCATTCTaGGTGAAGTACAGGATTCTC +
Preference number: 4 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLLVPSF*VKYRIL
Trigger: GAGAATCCTGTACTTCACTCAGAATGAAGGAACAAG...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATTTCTTCAAACTTTCATaGGCACTAGAATCTCCATCT +
Preference number: 4 (lower is better)
Translates to: HRQNVKSTILILQGKYAYFFKLS*ALESPS
Trigger: AGATGGAGATTCTAGTGCTCATGAAAGTTTGAAGAA...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATAGTGACCCAAGAATTTaGATTTCTAATCAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: HRQNVKSTILILQGKYAYSDPRI*ISNQSL
Trigger: TAGGGACTGATTAGAAATGCAAATTCTTGGGTCACT...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATACATCATCAGATTTCATaGGTTGCTGAGATTTGTTTT +
Preference number: 4 (lower is better)
Translates to: PPSKREEHHSNLAGKICIHHQIS*VAEICF
Trigger: AAAACAAATCTCAGCAACCCATGAAATCTGATGATG...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTAGTGGTTTTGTTTCTTaGTGCAGGTTGATGGAGAGA +
Preference number: 4 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLSGFVS*CRLMER
Trigger: TCTCTCCATCAACCTGCACCAAGAAACAAAACCACT...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATACTAAAGAATTCTGAATaGACAAAGGAAGTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PPSKREEHHSNLAGKICILKNSE*TKEVVL
Trigger: CAAAACCACTTCCTTTGTCCATTCAGAATTCTTTAG...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTGCCCTATCTCTAAAGTaGACCAATTCTGACTCTAGT +
Preference number: 4 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLALSLK*TNSDSS
Trigger: ACTAGAGTCAGAATTGGTCCACTTTAGAGATAGGGC...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTATACTTCTGAAGTTCTaGATGTTGAGGCACCTCTTG +
Preference number: 4 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLILLKF*MLRHLL
Trigger: CAAGAGGTGCCTCAACATCCAGAACTTCAGAAGTAT...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTTTCAGGTCAGCCTTTTaGAGTCTTAATTCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLFRSAF*SLNSVD
Trigger: GTCTACAGAATTAAGACTTCAAAAGGCTGACCTGAA...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR GCA 90 bp AGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTTCAGCCTACTAAATGTATaGCTTGCAACACAACTCTTC +
Preference number: 4 (lower is better)
Translates to: SSKIHQDTPHITSVLQTFSLLNV*LATQLF
Trigger: GAAGAGTTGTGTTGCAAGGCATACATTTAGTAGGCT...GAAAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATCATCTTCTGATAACTTaGCTTGTTACAAATGCTGTA +
Preference number: 4 (lower is better)
Translates to: HRQNVKSTILILQGKYAYHLLIT*LVTNAV
Trigger: TACAGCATTTGTAACAAGCCAAGTTATCAGAAGATG...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTAATGGACAAAGGAAGTaGTTTTGTTTCTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLNGQRK*FCFLVQ
Trigger: CTGCACCAAGAAACAAAACCACTTCCTTTGTCCATT...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CCA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTAGCTGTTGCTGTTGCTaGTTGAAGAACAACATTTTG +
Preference number: 4 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLSCCCC*LKNNIL
Trigger: CAAAATGTTGTTCTTCAACCAGCAACAGCAACAGCT...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR TCA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTCTTGAGTCAATTTACTaGAGTTTAAGCTTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLLESIY*SLSFGE
Trigger: CTCTCCAAAGCTTAAACTTCAGTAAATTGACTCAAG...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254181.8
CDS-3UTR GCA 90 bp AGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTTCATTTCCTTTTGTCTTTaGACTGTTTCAATGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SSKIHQDTPHITSVLQTFISFCL*TVSMRA
Trigger: AGCTCTCATTGAAACAGTGCAAAGACAAAAGGAAAT...GAAAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGAGGCACCTGGGCTTTGTaGCATCTTGGGTCACCCTGG +
Preference number: 5 (lower is better)
Translates to: CWLTPPVSASVGLESDPRGTWAL*HLGSPW
Trigger: CCAGGGTGACCCAAGATGCAACAAAGCCCAGGTGCC...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS TCA 90 bp CAGGTGTTTCCCAAATTGGGGAACCCCTGCTGCAGTTGCTGTGAATaGGAGTCAAGAGGCACCTGGGCTTTGTTGCATCTTGGGTCACCC +
Preference number: 5 (lower is better)
Translates to: QVFPKLGNPCCSCCE*ESRGTWALLHLGSP
Trigger: GGGTGACCCAAGATGCAACAAAGCCCAGGTGCCTCTTGACTCTCATTCACAGCAACTGCAGCAGGGGTTCCCCAATTTGGGAAACACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS GCA 90 bp GCTGCAGTTGCTGTGAATGAGAGTCAAGAGGCACCTGGGCTTTGTTaGATCTTGGGTCACCCTGGCTGTGCTCTGGTTCCAATGGAGATG +
Preference number: 5 (lower is better)
Translates to: AAVAVNESQEAPGLC*ILGHPGCALVPMEM
Trigger: CATCTCCATTGGAACCAGAGCACAGCCAGGGTGACCCAAGATGCAACAAAGCCCAGGTGCCTCTTGACTCTCATTCACAGCAACTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp GATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCACTCCATAGCGCTATGTaGCCCAGGCTGGTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: DCWLTPPVSASVGLESDPLHSAM*PRLVSN
Trigger: GTTGGAGACCAGCCTGGGCAACATAGCGCTATGGAG...TGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254181.8
CDS-3UTR CAA 90 bp GTCCCTAGCTGTTGCTGTTGCTGGTTGAAGAACAACATTTTGAAAACCACCGTCGGCACCTGGGCTTTGTaGCATCTTGGGTCACCCTGG +
Preference number: 5 (lower is better)
Translates to: VPSCCCCWLKNNILKTTVGTWAL*HLGSPW
Trigger: CCAGGGTGACCCAAGATGCAACAAAGCCCAGGTGCC...GACGGTGGTTTTCAAAATGTTGTTCTTCAACCAGCAACAGCAACAGCTAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS TCA 90 bp TGTTCCTGGGCATCCAGCTTCCTAACACCTGGAGGTGGTGCCTGCTaGAGAAATTCATCTATGATGCTCTCCTCAATACACTGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: CSWASSFLTPGGGAC*RNSSMMLSSIHCWS
Trigger: GCTCCAGCAGTGTATTGAGGAGAGCATCATAGATGAATTTCTTCAGCAGGCACCACCTCCAGGTGTTAGGAAGCTGGATGCCCAGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CCA 90 bp AGGCACCTGGGCTTTGTTGCATCTTGGGTCACCCTGGCTGTGCTCTaGTTCCAATGGAGATGTCAAACCATTTTTGGCATTGAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: RHLGFVASWVTLAVL*FQWRCQTIFGIESL
Trigger: CAGACTCTCAATGCCAAAAATGGTTTGACATCTCCATTGGAACCAGAGCACAGCCAGGGTGACCCAAGATGCAACAAAGCCCAGGTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp GTCCCTAGCTGTTGCTGTTGCTGGTTGAAGAACAACATTTTGAAAACCACCGTCTGGAGGTACAGTTCCTaGGACTTCCGGCTCCCATGG +
Preference number: 5 (lower is better)
Translates to: VPSCCCCWLKNNILKTTVWRYSS*DFRLPW
Trigger: CCATGGGAGCCGGAAGTCCAAGGAACTGTACCTCCA...GACGGTGGTTTTCAAAATGTTGTTCTTCAACCAGCAACAGCAACAGCTAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254181.8
CDS-3UTR CAA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGAGGGCAAACAAACACTTaGGTGGCAGCACTACCAACA +
Preference number: 5 (lower is better)
Translates to: CWLTPPVSASVGLESDPRGQTNT*VAALPT
Trigger: TGTTGGTAGTGCTGCCACCAAAGTGTTTGTTTGCCC...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS GCA 90 bp TCAAGAGGCACCTGGGCTTTGTTGCATCTTGGGTCACCCTGGCTGTaGTCTGGTTCCAATGGAGATGTCAAACCATTTTTGGCATTGAGA +
Preference number: 5 (lower is better)
Translates to: SRGTWALLHLGSPWL*SGSNGDVKPFLALR
Trigger: TCTCAATGCCAAAAATGGTTTGACATCTCCATTGGAACCAGAGCACAGCCAGGGTGACCCAAGATGCAACAAAGCCCAGGTGCCTCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CCA 90 bp GGCTTTGTTGCATCTTGGGTCACCCTGGCTGTGCTCTGGTTCCAATaGAGATGTCAAACCATTTTTGGCATTGAGAGTCTGGGTTGCAAG +
Preference number: 5 (lower is better)
Translates to: GFVASWVTLAVLWFQ*RCQTIFGIESLGCK
Trigger: CTTGCAACCCAGACTCTCAATGCCAAAAATGGTTTGACATCTCCATTGGAACCAGAGCACAGCCAGGGTGACCCAAGATGCAACAAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CCA 90 bp ATGTTGAGGCACCTCTTGAAGATGAACCTCGACAAGCCTTGTGTCTaGGCTGCTGATCAGCTTCCCTCCATCTTCATACATCACAGGAAG +
Preference number: 5 (lower is better)
Translates to: MLRHLLKMNLDKPCV*AADQLPSIFIHHRK
Trigger: CTTCCTGTGATGTATGAAGATGGAGGGAAGCTGATCAGCAGCCCAGACACAAGGCTTGTCGAGGTTCATCTTCAAGAGGTGCCTCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp GTCCCTAGCTGTTGCTGTTGCTGGTTGAAGAACAACATTTTGAAAACCACCGTCCAGGTGTTTCCCAAATaGGGGAACCCCTGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: VPSCCCCWLKNNILKTTVQVFPK*GNPCCS
Trigger: ACTGCAGCAGGGGTTCCCCAATTTGGGAAACACCTG...GACGGTGGTTTTCAAAATGTTGTTCTTCAACCAGCAACAGCAACAGCTAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGAATGTTGAGGCACCTCTaGAAGATGAACCTCGACAAG +
Preference number: 5 (lower is better)
Translates to: CWLTPPVSASVGLESDPRMLRHL*KMNLDK
Trigger: CTTGTCGAGGTTCATCTTCAAGAGGTGCCTCAACAT...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGACTGTTCAGCCATTCCTaGAGATCCTTCTGGAATCCT +
Preference number: 5 (lower is better)
Translates to: CWLTPPVSASVGLESDPRLFSHS*RSFWNP
Trigger: AGGATTCCAGAAGGATCTCAAGGAATGGCTGAACAG...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGACTCGCCTCCTGCATTTaGGTCTCTGAGATTTCTGAT +
Preference number: 5 (lower is better)
Translates to: CWLTPPVSASVGLESDPRLASCI*VSEISD
Trigger: ATCAGAAATCTCAGAGACCAAAATGCAGGAGGCGAG...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS TCA 90 bp TGGACCAATTCTGACTCTAGTGCAGAGCCATTTTCCAGGTCTCTCTaGTGCTGCTCTTGGCTTGCATCTCCACAGTCTCTCTGGAATCTT +
Preference number: 5 (lower is better)
Translates to: WTNSDSSAEPFSRSL*CCSWLASPQSLWNL
Trigger: AAGATTCCAGAGAGACTGTGGAGATGCAAGCCAAGAGCAGCATCAGAGAGACCTGGAAAATGGCTCTGCACTAGAGTCAGAATTGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CCA 90 bp TCAGCCACTGGAAGCTCCTTTTCACCGATTGCCCTATCTCTAAAGTaGACCAATTCTGACTCTAGTGCAGAGCCATTTTCCAGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: SATGSSFSPIALSLK*TNSDSSAEPFSRSL
Trigger: GAGAGACCTGGAAAATGGCTCTGCACTAGAGTCAGAATTGGTCCACTTTAGAGATAGGGCAATCGGTGAAAAGGAGCTTCCAGTGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CCA 90 bp AGCTTCCCTCCATCTTCATACATCACAGGAAGAGAAATGTCTCCCTaGTCCATCAGTGAGTCAGCCACTGGAAGCTCCTTTTCACCGATT +
Preference number: 5 (lower is better)
Translates to: SFPPSSYITGREMSP*SISESATGSSFSPI
Trigger: AATCGGTGAAAAGGAGCTTCCAGTGGCTGACTCACTGATGGACCAGGGAGACATTTCTCTTCCTGTGATGTATGAAGATGGAGGGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp AACCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCAGGGCTTTGTTGCATCTaGGGTCACCCTGGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: NHRQNVKSTILILQGKYAGLCCI*GHPGCA
Trigger: AGCACAGCCAGGGTGACCCAAGATGCAACAAAGCCC...TGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp CCATCTGATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTATGTTGAGGCACCTCTaGAAGATGAACCTCGACAAG +
Preference number: 5 (lower is better)
Translates to: PSDCWLTPPVSASVGLESMLRHL*KMNLDK
Trigger: CTTGTCGAGGTTCATCTTCAAGAGGTGCCTCAACAT...ACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATCAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp GTCCCTAGCTGTTGCTGTTGCTGGTTGAAGAACAACATTTTGAAAACCACCGTCTGTAATGGCCTGAATTaGGGGAGCTCCCGATATGGC +
Preference number: 5 (lower is better)
Translates to: VPSCCCCWLKNNILKTTVCNGLN*GSSRYG
Trigger: GCCATATCGGGAGCTCCCCAAATTCAGGCCATTACA...GACGGTGGTTTTCAAAATGTTGTTCTTCAACCAGCAACAGCAACAGCTAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS TCA 90 bp ATCTTCATACATCACAGGAAGAGAAATGTCTCCCTGGTCCATCAGTaGGTCAGCCACTGGAAGCTCCTTTTCACCGATTGCCCTATCTCT +
Preference number: 5 (lower is better)
Translates to: IFIHHRKRNVSLVHQ*VSHWKLLFTDCPIS
Trigger: AGAGATAGGGCAATCGGTGAAAAGGAGCTTCCAGTGGCTGACTCACTGATGGACCAGGGAGACATTTCTCTTCCTGTGATGTATGAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS TCA 90 bp CTCTTTGCAAGGATGAAGTACAGGATTCTCTTTGCAAGGATGAAGTaGGGCCGAGTGAGTCTGTCAAGCAGGTCTGTACAAAGAGTCACC +
Preference number: 5 (lower is better)
Translates to: LFARMKYRILFARMK*GRVSLSSRSVQRVT
Trigger: GGTGACTCTTTGTACAGACCTGCTTGACAGACTCACTCGGCCTCACTTCATCCTTGCAAAGAGAATCCTGTACTTCATCCTTGCAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS GCA 90 bp TTCTGTATGTTCCTGGGCATCCAGCTTCCTAACACCTGGAGGTGGTaGCTGCTGAAGAAATTCATCTATGATGCTCTCCTCAATACACTG +
Preference number: 5 (lower is better)
Translates to: FCMFLGIQLPNTWRW*LLKKFIYDALLNTL
Trigger: CAGTGTATTGAGGAGAGCATCATAGATGAATTTCTTCAGCAGGCACCACCTCCAGGTGTTAGGAAGCTGGATGCCCAGGAACATACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCTGTAGGTCGGCATTCTaGTCTGGTTCAACGGGTAGA +
Preference number: 5 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVCRSAF*SGSTGR
Trigger: TCTACCCGTTGAACCAGACAAGAATGCCGACCTACA...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp GTCCCTAGCTGTTGCTGTTGCTGGTTGAAGAACAACATTTTGAAAACCACCGTCTTTTTGTTTCCTGGGTaGTCAGAACCCAGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: VPSCCCCWLKNNILKTTVFLFPG*SEPSAP
Trigger: TGGGGCACTGGGTTCTGACAACCCAGGAAACAAAAA...GACGGTGGTTTTCAAAATGTTGTTCTTCAACCAGCAACAGCAACAGCTAGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp GATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCATTTCTTGTTAGTTCCTaGGCTTCACCTCTTGTGTTC +
Preference number: 5 (lower is better)
Translates to: DCWLTPPVSASVGLESDPFLVSS*ASPLVF
Trigger: GAACACAAGAGGTGAAGCCAAGGAACTAACAAGAAA...TGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS GCA 90 bp GAAGTACAGGATTCTCTTTGCAAGGATGAAGTACAGGATTCTCTTTaGAAGGATGAAGTGAGGCCGAGTGAGTCTGTCAAGCAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: EVQDSLCKDEVQDSL*KDEVRPSESVKQVC
Trigger: ACAGACCTGCTTGACAGACTCACTCGGCCTCACTTCATCCTTGCAAAGAGAATCCTGTACTTCATCCTTGCAAAGAGAATCCTGTACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGAATCAGATTTCATGGGTaGCTGAGATTTGTTTTGGTG +
Preference number: 5 (lower is better)
Translates to: CWLTPPVSASVGLESDPRIRFHG*LRFVLV
Trigger: CACCAAAACAAATCTCAGCAACCCATGAAATCTGAT...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp TGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCAAGACTAAATCCTCTAAACTaGATGGGTTCTTCCTATTGC +
Preference number: 5 (lower is better)
Translates to: CWLTPPVSASVGLESDPRLNPLN*MGSSYC
Trigger: GCAATAGGAAGAACCCATCAAGTTTAGAGGATTTAG...TCTTGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp AACCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCAGATGCTGCTCTTGGCTaGCATCTCCACAGTCTCTCT +
Preference number: 5 (lower is better)
Translates to: NHRQNVKSTILILQGKYADAALG*HLHSLS
Trigger: AGAGAGACTGTGGAGATGCAAGCCAAGAGCAGCATC...TGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp AACCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATGTAATGGCCTGAATTaGGGGAGCTCCCGATATGGC +
Preference number: 5 (lower is better)
Translates to: NHRQNVKSTILILQGKYACNGLN*GSSRYG
Trigger: GCCATATCGGGAGCTCCCCAAATTCAGGCCATTACA...TGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCCTCGCCTCCTGCATTTaGGTCTCTGAGATTTCTGAT +
Preference number: 5 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVLASCI*VSEISD
Trigger: ATCAGAAATCTCAGAGACCAAAATGCAGGAGGCGAG...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS TCA 90 bp TTCATTGATGGTGTCAATGGGCTGTTGATCTCAGAAATCATCTCCTaGGAGACTTCCAGGACTTCACATTTCCCAACAGGTGCACTACTG +
Preference number: 5 (lower is better)
Translates to: FIDGVNGLLISEIIS*ETSRTSHFPTGALL
Trigger: CAGTAGTGCACCTGTTGGGAAATGTGAAGTCCTGGAAGTCTCTCAGGAGATGATTTCTGAGATCAACAGCCCATTGACACCATCAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS TCA 90 bp CACTGGATTCTGAGGTCAGCTTCATTGATGGTGTCAATGGGCTGTTaGTCTCAGAAATCATCTCCTGAGAGACTTCCAGGACTTCACATT +
Preference number: 5 (lower is better)
Translates to: HWILRSASLMVSMGC*SQKSSPERLPGLHI
Trigger: AATGTGAAGTCCTGGAAGTCTCTCAGGAGATGATTTCTGAGATCAACAGCCCATTGACACCATCAATGAAGCTGACCTCAGAATCCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTGGGCTTTGTTGCATCTaGGGTCACCCTGGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLGLCCI*GHPGCA
Trigger: AGCACAGCCAGGGTGACCCAAGATGCAACAAAGCCC...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp GTCCCTAGCTGTTGCTGTTGCTGGTTGAAGAACAACATTTTGAAAACCACCGTCAAGTGGTTTTGTTTCTaGGTGCAGGTTGATGGAGAG +
Preference number: 5 (lower is better)
Translates to: VPSCCCCWLKNNILKTTVKWFCF*VQVDGE
Trigger: CTCTCCATCAACCTGCACCAAGAAACAAAACCACTT...GACGGTGGTTTTCAAAATGTTGTTCTTCAACCAGCAACAGCAACAGCTAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp GATTGCTGGCTCACACCTCCTGTTTCTGCATCAGTTGGTCTAGAGAGTGACCCATTTGGGAATATAAACTaGCTCGTTATTCTTCACCAG +
Preference number: 5 (lower is better)
Translates to: DCWLTPPVSASVGLESDPFGNIN*LVILHQ
Trigger: CTGGTGAAGAATAACGAGCAAGTTTATATTCCCAAA...TGGGTCACTCTCTAGACCAACTGATGCAGAAACAGGAGGTGTGAGCCAGCAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATGTAGGTCGGCATTCTaGTCTGGTTCAACGGGTAGA +
Preference number: 5 (lower is better)
Translates to: PPSKREEHHSNLAGKICICRSAF*SGSTGR
Trigger: TCTACCCGTTGAACCAGACAAGAATGCCGACCTACA...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATGATGCTGCTCTTGGCTaGCATCTCCACAGTCTCTCT +
Preference number: 5 (lower is better)
Translates to: HRQNVKSTILILQGKYAYDAALG*HLHSLS
Trigger: AGAGAGACTGTGGAGATGCAAGCCAAGAGCAGCATC...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp AACCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATTTTTGTTTCCTGGGTaGTCAGAACCCAGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: NHRQNVKSTILILQGKYAFLFPG*SEPSAP
Trigger: TGGGGCACTGGGTTCTGACAACCCAGGAAACAAAAA...TGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS GCA 90 bp GCAACAACAGGGCAAACAAACACTTTGGTGGCAGCACTACCAACATaGATTTGTGGAGATGAATTTTCATCCCCACATTCTTTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: ATTGQTNTLVAALPT*ICGDEFSSPHSFPV
Trigger: TACTGGGAAAGAATGTGGGGATGAAAATTCATCTCCACAAATGCATGTTGGTAGTGCTGCCACCAAAGTGTTTGTTTGCCCTGTTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCCTTCTGGCTCCAAATTaGGATGAATCCACATACCTT +
Preference number: 5 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVLLAPN*DESTYL
Trigger: AAGGTATGTGGATTCATCCAAATTTGGAGCCAGAAG...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp GTCCCTAGCTGTTGCTGTTGCTGGTTGAAGAACAACATTTTGAAAACCACCGTCAAACCATTTTTGGCATaGAGAGTCTGGGTTGCAAGA +
Preference number: 5 (lower is better)
Translates to: VPSCCCCWLKNNILKTTVKPFLA*RVWVAR
Trigger: TCTTGCAACCCAGACTCTCAATGCCAAAAATGGTTT...GACGGTGGTTTTCAAAATGTTGTTCTTCAACCAGCAACAGCAACAGCTAGGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp CTAATCTTGCAGGGAAAATATGCATATGCGCCTGAGTTCTGGGATCTAGGTGTCGATGTCAAACCATTTTaGGCATTGAGAGTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: LILQGKYAYAPEFWDLGVDVKPF*ALRVWV
Trigger: AACCCAGACTCTCAATGCCAAAAATGGTTTGACATC...GACACCTAGATCCCAGAACTCAGGCGCATATGCATATTTTCCCTGCAAGATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTCAGGTGTTTCCCAAATaGGGGAACCCCTGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLQVFPK*GNPCCS
Trigger: ACTGCAGCAGGGGTTCCCCAATTTGGGAAACACCTG...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATACTGAAGTTCTGGATGTaGAGGCACCTCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: PPSKREEHHSNLAGKICILKFWM*RHLLKM
Trigger: CATCTTCAAGAGGTGCCTCAACATCCAGAACTTCAG...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp AACCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCACTGAAGTTCTGGATGTaGAGGCACCTCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: NHRQNVKSTILILQGKYALKFWM*RHLLKM
Trigger: CATCTTCAAGAGGTGCCTCAACATCCAGAACTTCAG...TGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATAGATACACATAGATCGTaGTATGTGAACCAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: PPSKREEHHSNLAGKICIDTHRS*YVNQAC
Trigger: GCAGGCCTGGTTCACATACAACGATCTATGTGTATC...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp AGTGACCCAAGAATTTGCATTTCTAATCAGTCCCTAGCTGTTGCTGTTGCTGGTCTTCTGGCTCCAAATTaGGATGAATCCACATACCTT +
Preference number: 5 (lower is better)
Translates to: SDPRICISNQSLAVAVAGLLAPN*DESTYL
Trigger: AAGGTATGTGGATTCATCCAAATTTGGAGCCAGAAG...ACCAGCAACAGCAACAGCTAGGGACTGATTAGAAATGCAAATTCTTGGGTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp AACCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCACCATTACAGTTGGTATaGAATGAAGGCCCGAGTTTC +
Preference number: 5 (lower is better)
Translates to: NHRQNVKSTILILQGKYAPLQLV*NEGPSF
Trigger: GAAACTCGGGCCTTCATTCAATACCAACTGTAATGG...TGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATAAAGTGGTTTTGTTTCTaGGTGCAGGTTGATGGAGAG +
Preference number: 5 (lower is better)
Translates to: PPSKREEHHSNLAGKICIKWFCF*VQVDGE
Trigger: CTCTCCATCAACCTGCACCAAGAAACAAAACCACTT...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CCA 90 bp TCTGGTTCCAATGGAGATGTCAAACCATTTTTGGCATTGAGAGTCTaGGTTGCAAGAACAGTCTCATCTAGGTTAGGATTTCCATTACAG +
Preference number: 5 (lower is better)
Translates to: SGSNGDVKPFLALRV*VARTVSSRLGFPLQ
Trigger: CTGTAATGGAAATCCTAACCTAGATGAGACTGTTCTTGCAACCCAGACTCTCAATGCCAAAAATGGTTTGACATCTCCATTGGAACCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp AGTGACCCAAGAATTTGCATTTCTAATCAGTCCCTAGCTGTTGCTGTTGCTGGTCTAAATCCTCTAAACTaGATGGGTTCTTCCTATTGC +
Preference number: 5 (lower is better)
Translates to: SDPRICISNQSLAVAVAGLNPLN*MGSSYC
Trigger: GCAATAGGAAGAACCCATCAAGTTTAGAGGATTTAG...ACCAGCAACAGCAACAGCTAGGGACTGATTAGAAATGCAAATTCTTGGGTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTGGGCAAACAAACACTTaGGTGGCAGCACTACCAACA +
Preference number: 5 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLGQTNT*VAALPT
Trigger: TGTTGGTAGTGCTGCCACCAAAGTGTTTGTTTGCCC...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATTTCTTGTTAGTTCCTaGGCTTCACCTCTTGTGTTC +
Preference number: 5 (lower is better)
Translates to: PPSKREEHHSNLAGKICIFLVSS*ASPLVF
Trigger: GAACACAAGAGGTGAAGCCAAGGAACTAACAAGAAA...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS GCA 90 bp CAGATGAATGATAAGGACCCTGGAGAGCCTACTAAATGTATGCCTTaGAACACAACTCTTCTGCTTACACATCTGACAGTTATATTCAAG +
Preference number: 5 (lower is better)
Translates to: QMNDKDPGEPTKCMP*NTTLLLTHLTVIFK
Trigger: CTTGAATATAACTGTCAGATGTGTAAGCAGAAGAGTTGTGTTGCAAGGCATACATTTAGTAGGCTCTCCAGGGTCCTTATCATTCATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp CCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATAGCATCTTCTGATAACTaGGCTTGTTACAAATGCTGT +
Preference number: 5 (lower is better)
Translates to: PPSKREEHHSNLAGKICIASSDN*ACYKCC
Trigger: ACAGCATTTGTAACAAGCCAAGTTATCAGAAGATGC...TATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATAAACCATTTTTGGCATaGAGAGTCTGGGTTGCAAGA +
Preference number: 5 (lower is better)
Translates to: HRQNVKSTILILQGKYAYKPFLA*RVWVAR
Trigger: TCTTGCAACCCAGACTCTCAATGCCAAAAATGGTTT...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp AGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTTCGATACACATAGATCGTaGTATGTGAACCAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: SSKIHQDTPHITSVLQTFDTHRS*YVNQAC
Trigger: GCAGGCCTGGTTCACATACAACGATCTATGTGTATC...GAAAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp AGTGACCCAAGAATTTGCATTTCTAATCAGTCCCTAGCTGTTGCTGTTGCTGGTTTGAAGAACAACATTTaGAAAACCACCGTCAAAACG +
Preference number: 5 (lower is better)
Translates to: SDPRICISNQSLAVAVAGLKNNI*KTTVKT
Trigger: CGTTTTGACGGTGGTTTTCAAAATGTTGTTCTTCAA...ACCAGCAACAGCAACAGCTAGGGACTGATTAGAAATGCAAATTCTTGGGTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATTTGCTGAGATTTGTTTaGGTGGATTATGTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: HRQNVKSTILILQGKYAYLLRFV*VDYVQE
Trigger: TTCCTGGACATAATCCACCAAAACAAATCTCAGCAA...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp CACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATATATCAGATTTCATGGGTaGCTGAGATTTGTTTTGGTG +
Preference number: 5 (lower is better)
Translates to: HRQNVKSTILILQGKYAYIRFHG*LRFVLV
Trigger: CACCAAAACAAATCTCAGCAACCCATGAAATCTGAT...ATATGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp AACCACCGTCAAAACGTGAAGAGCACCATTCTAATCTTGCAGGGAAAATATGCATCAGAATGTCCTCATTaGTCTGTACATCAGATGATA +
Preference number: 5 (lower is better)
Translates to: NHRQNVKSTILILQGKYASECPH*SVHQMI
Trigger: TATCATCTGATGTACAGACAAATGAGGACATTCTGA...TGCATATTTTCCCTGCAAGATTAGAATGGTGCTCTTCACGTTTTGACGGTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp AGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTTCCCATTACAGTTGGTATaGAATGAAGGCCCGAGTTTC +
Preference number: 5 (lower is better)
Translates to: SSKIHQDTPHITSVLQTFPLQLV*NEGPSF
Trigger: GAAACTCGGGCCTTCATTCAATACCAACTGTAATGG...GAAAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CCA 90 bp GCATATTCCTGCTTTCAAACACACTCCAATCATCATCAGATTTCATaGGTTGCTGAGATTTGTTTTGGTGGATTATGTCCAGGAACATAT +
Preference number: 5 (lower is better)
Translates to: AYSCFQTHSNHHQIS*VAEICFGGLCPGTY
Trigger: ATATGTTCCTGGACATAATCCACCAAAACAAATCTCAGCAACCCATGAAATCTGATGATGATTGGAGTGTGTTTGAAAGCAGGAATATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTGATGTCAAACCATTTTaGGCATTGAGAGTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLDVKPF*ALRVWV
Trigger: AACCCAGACTCTCAATGCCAAAAATGGTTTGACATC...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp AGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTTCTCAGAATGTCCTCATTaGTCTGTACATCAGATGATA +
Preference number: 5 (lower is better)
Translates to: SSKIHQDTPHITSVLQTFSECPH*SVHQMI
Trigger: TATCATCTGATGTACAGACAAATGAGGACATTCTGA...GAAAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTTTTGGGAATATAAACTaGCTCGTTATTCTTCACCAG +
Preference number: 5 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLFGNIN*LVILHQ
Trigger: CTGGTGAAGAATAACGAGCAAGTTTATATTCCCAAA...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS-3UTR CAA 90 bp ACAGTAGCAAAATACACCAAGATACTCCACACATTACCAGTGTTCTTCAAACTTTTGAAGAACAACATTTaGAAAACCACCGTCAAAACG +
Preference number: 5 (lower is better)
Translates to: TVAKYTKILHTLPVFFKLLKNNI*KTTVKT
Trigger: CGTTTTGACGGTGGTTTTCAAAATGTTGTTCTTCAA...AAGTTTGAAGAACACTGGTAATGTGTGGAGTATCTTGGTGTATTTTGCTACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS GCA 90 bp AAATGCTGTAAAATGAAGTTTTGTCAATTTCCTTCAGCATATTCCTaGTTTCAAACACACTCCAATCATCATCAGATTTCATGGGTTGCT +
Preference number: 5 (lower is better)
Translates to: KCCKMKFCQFPSAYS*FQTHSNHHQISWVA
Trigger: AGCAACCCATGAAATCTGATGATGATTGGAGTGTGTTTGAAAGCAGGAATATGCTGAAGGAAATTGACAAAACTTCATTTTACAGCATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CCA 72 bp GTCGTCCCCGGGGGTAGTTTGCGCAGAGGGTCGCTTTaGGCGCGCTTAGAGTCGCGTGGTGCCTGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: VVPGGSLRRGSL*ARLESRGAWAS
Trigger: GCTGGCCCAGGCACCACGCGACTCTAAGCGCGCCCAAAGCGACCCTCTGCGCAAACTACCCCCGGGGACGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600020.5
CDS GCA 72 bp GCTGTGAATGAGAGTCAAGAGGCACCTGGGCTTTGTTaGATCTTGGGTCACCCTGGCTGTGCTCTGGTTCCA +
Preference number: 6 (lower is better)
Translates to: AVNESQEAPGLC*ILGHPGCALVP
Trigger: TGGAACCAGAGCACAGCCAGGGTGACCCAAGATGCAACAAAGCCCAGGTGCCTCTTGACTCTCATTCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CCA 72 bp AGAGGCACCTGGGCTTTGTTGCATCTTGGGTCACCCTaGCTGTGCTCTGGTTCCAATGGAGATGTCAAACCA +
Preference number: 6 (lower is better)
Translates to: RGTWALLHLGSP*LCSGSNGDVKP
Trigger: TGGTTTGACATCTCCATTGGAACCAGAGCACAGCCAGGGTGACCCAAGATGCAACAAAGCCCAGGTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CAA 72 bp AATGAGAGTCAAGAGGCACCTGGGCTTTGTTGCATCTaGGGTCACCCTGGCTGTGCTCTGGTTCCAATGGAG +
Preference number: 6 (lower is better)
Translates to: NESQEAPGLCCI*GHPGCALVPME
Trigger: CTCCATTGGAACCAGAGCACAGCCAGGGTGACCCAAGATGCAACAAAGCCCAGGTGCCTCTTGACTCTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS TCA 72 bp CCCAAATTGGGGAACCCCTGCTGCAGTTGCTGTGAATaGGAGTCAAGAGGCACCTGGGCTTTGTTGCATCTT +
Preference number: 6 (lower is better)
Translates to: PKLGNPCCSCCE*ESRGTWALLHL
Trigger: AAGATGCAACAAAGCCCAGGTGCCTCTTGACTCTCATTCACAGCAACTGCAGCAGGGGTTCCCCAATTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CAA 90 bp GTTGCTGTGAATGAGAGTCAAGAGGCACCTGGGCTTTGTTGCATCTaGGGTCACCCTGGCTGTGCTCTGGTTCCAATGGAGATGTCAAAC +
Preference number: 6 (lower is better)
Translates to: VAVNESQEAPGLCCI*GHPGCALVPMEMSN
Trigger: GTTTGACATCTCCATTGGAACCAGAGCACAGCCAGGGTGACCCAAGATGCAACAAAGCCCAGGTGCCTCTTGACTCTCATTCACAGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS TCA 72 bp TCTGACTCTAGTGCAGAGCCATTTTCCAGGTCTCTCTaGTGCTGCTCTTGGCTTGCATCTCCACAGTCTCTC +
Preference number: 6 (lower is better)
Translates to: SDSSAEPFSRSL*CCSWLASPQSL
Trigger: GAGAGACTGTGGAGATGCAAGCCAAGAGCAGCATCAGAGAGACCTGGAAAATGGCTCTGCACTAGAGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS TCA 72 bp CATCACAGGAAGAGAAATGTCTCCCTGGTCCATCAGTaGGTCAGCCACTGGAAGCTCCTTTTCACCGATTGC +
Preference number: 6 (lower is better)
Translates to: HHRKRNVSLVHQ*VSHWKLLFTDC
Trigger: GCAATCGGTGAAAAGGAGCTTCCAGTGGCTGACTCACTGATGGACCAGGGAGACATTTCTCTTCCTGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS GCA 72 bp CTGAGAGACTTCCAGGACTTCACATTTCCCAACAGGTaGACTACTGCTCAAGGGAAGAGGTGGTTTGGTGCT +
Preference number: 6 (lower is better)
Translates to: LRDFQDFTFPNR*TTAQGKRWFGA
Trigger: AGCACCAAACCACCTCTTCCCTTGAGCAGTAGTGCACCTGTTGGGAAATGTGAAGTCCTGGAAGTCTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS GCA 72 bp ACCTGGGCTTTGTTGCATCTTGGGTCACCCTGGCTGTaGTCTGGTTCCAATGGAGATGTCAAACCATTTTTG +
Preference number: 6 (lower is better)
Translates to: TWALLHLGSPWL*SGSNGDVKPFL
Trigger: CAAAAATGGTTTGACATCTCCATTGGAACCAGAGCACAGCCAGGGTGACCCAAGATGCAACAAAGCCCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CCA 72 bp ATGTTCCTGGGCATCCAGCTTCCTAACACCTGGAGGTaGTGCCTGCTGAAGAAATTCATCTATGATGCTCTC +
Preference number: 6 (lower is better)
Translates to: MFLGIQLPNTWR*CLLKKFIYDAL
Trigger: GAGAGCATCATAGATGAATTTCTTCAGCAGGCACCACCTCCAGGTGTTAGGAAGCTGGATGCCCAGGAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CAA 72 bp CCACAGTCTCTCTGGAATCTTTGTAGGTCGGCATTCTaGTCTGGTTCAACGGGTAGAACCAGGGAATCACTG +
Preference number: 6 (lower is better)
Translates to: PQSLWNLCRSAF*SGSTGRTRESL
Trigger: CAGTGATTCCCTGGTTCTACCCGTTGAACCAGACAAGAATGCCGACCTACAAAGATTCCAGAGAGACTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CAA 72 bp TGTAGGCCTGGAGAGGATCCCCCATCTTCACGTTTCTaGTTAGTTCCTTGGCTTCACCTCTTGTGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: CRPGEDPPSSRF*LVPWLHLLCSL
Trigger: CAGAGAACACAAGAGGTGAAGCCAAGGAACTAACAAGAAACGTGAAGATGGGGGATCCTCTCCAGGCCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS TCA 72 bp GCATCCAGCTTCCTAACACCTGGAGGTGGTGCCTGCTaGAGAAATTCATCTATGATGCTCTCCTCAATACAC +
Preference number: 6 (lower is better)
Translates to: ASSFLTPGGGAC*RNSSMMLSSIH
Trigger: GTGTATTGAGGAGAGCATCATAGATGAATTTCTTCAGCAGGCACCACCTCCAGGTGTTAGGAAGCTGGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CCA 72 bp CCATCTTCATACATCACAGGAAGAGAAATGTCTCCCTaGTCCATCAGTGAGTCAGCCACTGGAAGCTCCTTT +
Preference number: 6 (lower is better)
Translates to: PSSYITGREMSP*SISESATGSSF
Trigger: AAAGGAGCTTCCAGTGGCTGACTCACTGATGGACCAGGGAGACATTTCTCTTCCTGTGATGTATGAAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CAA 72 bp CTCATACTTCTGAAGTTCTGGATGTTGAGGCACCTCTaGAAGATGAACCTCGACAAGCCTTGTGTCTGGGCT +
Preference number: 6 (lower is better)
Translates to: LILLKFWMLRHL*KMNLDKPCVWA
Trigger: AGCCCAGACACAAGGCTTGTCGAGGTTCATCTTCAAGAGGTGCCTCAACATCCAGAACTTCAGAAGTATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CAA 90 bp TCACCCTGGCTGTGCTCTGGTTCCAATGGAGATGTCAAACCATTTTaGGCATTGAGAGTCTGGGTTGCAAGAACAGTCTCATCTAGGTTA +
Preference number: 6 (lower is better)
Translates to: SPWLCSGSNGDVKPF*ALRVWVARTVSSRL
Trigger: TAACCTAGATGAGACTGTTCTTGCAACCCAGACTCTCAATGCCAAAAATGGTTTGACATCTCCATTGGAACCAGAGCACAGCCAGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CAA 90 bp ATTGGTTTTCTCATACTTCTGAAGTTCTGGATGTTGAGGCACCTCTaGAAGATGAACCTCGACAAGCCTTGTGTCTGGGCTGCTGATCAG +
Preference number: 6 (lower is better)
Translates to: IGFLILLKFWMLRHL*KMNLDKPCVWAADQ
Trigger: CTGATCAGCAGCCCAGACACAAGGCTTGTCGAGGTTCATCTTCAAGAGGTGCCTCAACATCCAGAACTTCAGAAGTATGAGAAAACCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS TCA 72 bp GGTGTCAATGGGCTGTTGATCTCAGAAATCATCTCCTaGGAGACTTCCAGGACTTCACATTTCCCAACAGGT +
Preference number: 6 (lower is better)
Translates to: GVNGLLISEIIS*ETSRTSHFPTG
Trigger: ACCTGTTGGGAAATGTGAAGTCCTGGAAGTCTCTCAGGAGATGATTTCTGAGATCAACAGCCCATTGACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS TCA 72 bp AGGATGAAGTACAGGATTCTCTTTGCAAGGATGAAGTaGGGCCGAGTGAGTCTGTCAAGCAGGTCTGTACAA +
Preference number: 6 (lower is better)
Translates to: RMKYRILFARMK*GRVSLSSRSVQ
Trigger: TTGTACAGACCTGCTTGACAGACTCACTCGGCCTCACTTCATCCTTGCAAAGAGAATCCTGTACTTCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CCA 72 bp TCTTGTCTGGTTCAACGGGTAGAACCAGGGAATCACTaGATTCTGAGGTCAGCTTCATTGATGGTGTCAATG +
Preference number: 6 (lower is better)
Translates to: SCLVQRVEPGNH*ILRSASLMVSM
Trigger: CATTGACACCATCAATGAAGCTGACCTCAGAATCCAGTGATTCCCTGGTTCTACCCGTTGAACCAGACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CCA 72 bp GGAAGCTCCTTTTCACCGATTGCCCTATCTCTAAAGTaGACCAATTCTGACTCTAGTGCAGAGCCATTTTCC +
Preference number: 6 (lower is better)
Translates to: GSSFSPIALSLK*TNSDSSAEPFS
Trigger: GGAAAATGGCTCTGCACTAGAGTCAGAATTGGTCCACTTTAGAGATAGGGCAATCGGTGAAAAGGAGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CCA 72 bp TTCTGTATGTTCCTGGGCATCCAGCTTCCTAACACCTaGAGGTGGTGCCTGCTGAAGAAATTCATCTATGAT +
Preference number: 6 (lower is better)
Translates to: FCMFLGIQLPNT*RWCLLKKFIYD
Trigger: ATCATAGATGAATTTCTTCAGCAGGCACCACCTCCAGGTGTTAGGAAGCTGGATGCCCAGGAACATACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CAA 90 bp TGGCTGTGCTCTGGTTCCAATGGAGATGTCAAACCATTTTTGGCATaGAGAGTCTGGGTTGCAAGAACAGTCTCATCTAGGTTAGGATTT +
Preference number: 6 (lower is better)
Translates to: WLCSGSNGDVKPFLA*RVWVARTVSSRLGF
Trigger: AAATCCTAACCTAGATGAGACTGTTCTTGCAACCCAGACTCTCAATGCCAAAAATGGTTTGACATCTCCATTGGAACCAGAGCACAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CAA 90 bp CTCTACGAATGTATTGGTTTTCTCATACTTCTGAAGTTCTGGATGTaGAGGCACCTCTTGAAGATGAACCTCGACAAGCCTTGTGTCTGG +
Preference number: 6 (lower is better)
Translates to: LYECIGFLILLKFWM*RHLLKMNLDKPCVW
Trigger: CCAGACACAAGGCTTGTCGAGGTTCATCTTCAAGAGGTGCCTCAACATCCAGAACTTCAGAAGTATGAGAAAACCAATACATTCGTAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS GCA 72 bp GATAAGGACCCTGGAGAGCCTACTAAATGTATGCCTTaGAACACAACTCTTCTGCTTACACATCTGACAGTT +
Preference number: 6 (lower is better)
Translates to: DKDPGEPTKCMP*NTTLLLTHLTV
Trigger: AACTGTCAGATGTGTAAGCAGAAGAGTTGTGTTGCAAGGCATACATTTAGTAGGCTCTCCAGGGTCCTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CAA 72 bp TCTGGTTCCAATGGAGATGTCAAACCATTTTTGGCATaGAGAGTCTGGGTTGCAAGAACAGTCTCATCTAGG +
Preference number: 6 (lower is better)
Translates to: SGSNGDVKPFLA*RVWVARTVSSR
Trigger: CCTAGATGAGACTGTTCTTGCAACCCAGACTCTCAATGCCAAAAATGGTTTGACATCTCCATTGGAACCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CAA 72 bp AGAGGATCCCCCATCTTCACGTTTCTTGTTAGTTCCTaGGCTTCACCTCTTGTGTTCTCTGCATCTAAAATG +
Preference number: 6 (lower is better)
Translates to: RGSPIFTFLVSS*ASPLVFSASKM
Trigger: CATTTTAGATGCAGAGAACACAAGAGGTGAAGCCAAGGAACTAACAAGAAACGTGAAGATGGGGGATCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CAA 72 bp TGTATTGGTTTTCTCATACTTCTGAAGTTCTGGATGTaGAGGCACCTCTTGAAGATGAACCTCGACAAGCCT +
Preference number: 6 (lower is better)
Translates to: CIGFLILLKFWM*RHLLKMNLDKP
Trigger: AGGCTTGTCGAGGTTCATCTTCAAGAGGTGCCTCAACATCCAGAACTTCAGAAGTATGAGAAAACCAATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CAA 90 bp ATTTCTTGTTTGGTACAGGGTTATCTTCCTTCAGAATGTCCTCATTaGTCTGTACATCAGATGATAGTGTGTTTTGCCCCTTCCCACCTT +
Preference number: 6 (lower is better)
Translates to: ISCLVQGYLPSECPH*SVHQMIVCFAPSHL
Trigger: AAGGTGGGAAGGGGCAAAACACACTATCATCTGATGTACAGACAAATGAGGACATTCTGAAGGAAGATAACCCTGTACCAAACAAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CCA 72 bp AATGGAGATGTCAAACCATTTTTGGCATTGAGAGTCTaGGTTGCAAGAACAGTCTCATCTAGGTTAGGATTT +
Preference number: 6 (lower is better)
Translates to: NGDVKPFLALRV*VARTVSSRLGF
Trigger: AAATCCTAACCTAGATGAGACTGTTCTTGCAACCCAGACTCTCAATGCCAAAAATGGTTTGACATCTCCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CAA 90 bp TGGGTTGCAAGAACAGTCTCATCTAGGTTAGGATTTCCATTACAGTaGGTATTGAATGAAGGCCCGAGTTTCAAATCTCTATCTTTTTCT +
Preference number: 6 (lower is better)
Translates to: WVARTVSSRLGFPLQ*VLNEGPSFKSLSFS
Trigger: AGAAAAAGATAGAGATTTGAAACTCGGGCCTTCATTCAATACCAACTGTAATGGAAATCCTAACCTAGATGAGACTGTTCTTGCAACCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CCA 72 bp TGCTTTCAAACACACTCCAATCATCATCAGATTTCATaGGTTGCTGAGATTTGTTTTGGTGGATTATGTCCA +
Preference number: 6 (lower is better)
Translates to: CFQTHSNHHQIS*VAEICFGGLCP
Trigger: TGGACATAATCCACCAAAACAAATCTCAGCAACCCATGAAATCTGATGATGATTGGAGTGTGTTTGAAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CAA 72 bp TTCAAACACACTCCAATCATCATCAGATTTCATGGGTaGCTGAGATTTGTTTTGGTGGATTATGTCCAGGAA +
Preference number: 6 (lower is better)
Translates to: FKHTPIIIRFHG*LRFVLVDYVQE
Trigger: TTCCTGGACATAATCCACCAAAACAAATCTCAGCAACCCATGAAATCTGATGATGATTGGAGTGTGTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CAA 90 bp ATTCCTGCTTTCAAACACACTCCAATCATCATCAGATTTCATGGGTaGCTGAGATTTGTTTTGGTGGATTATGTCCAGGAACATATTCAA +
Preference number: 6 (lower is better)
Translates to: IPAFKHTPIIIRFHG*LRFVLVDYVQEHIQ
Trigger: TTGAATATGTTCCTGGACATAATCCACCAAAACAAATCTCAGCAACCCATGAAATCTGATGATGATTGGAGTGTGTTTGAAAGCAGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS CAA 90 bp GCAAGAACAGTCTCATCTAGGTTAGGATTTCCATTACAGTTGGTATaGAATGAAGGCCCGAGTTTCAAATCTCTATCTTTTTCTAAATCC +
Preference number: 6 (lower is better)
Translates to: ARTVSSRLGFPLQLV*NEGPSFKSLSFSKS
Trigger: GGATTTAGAAAAAGATAGAGATTTGAAACTCGGGCCTTCATTCAATACCAACTGTAATGGAAATCCTAACCTAGATGAGACTGTTCTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254181.8
ENST00000598197.1
CDS TCA 72 bp TCCTTTCTTTATGTAACAGTTCTTTCCGAAGAAACTTaGGTCAATTTACTGAAGTTTAAGCTTTGGAGAGCT +
Preference number: 6 (lower is better)
Translates to: SFLYVTVLSEET*VNLLKFKLWRA
Trigger: AGCTCTCCAAAGCTTAAACTTCAGTAAATTGACTCAAGTTTCTTCGGAAAGAACTGTTACATAAAGAAAGGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254181.8
ENST00000600020.5
ENST00000600940.1