RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP26 (Homo sapiens)

Ensembl gene IDs: ENSG00000134588

Ensembl transcript IDs: ENST00000370832.1, ENST00000417459.2, ENST00000511190.5

Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTCTTGTAGGAGAGAAGGATGCTCATCAGCCAGAGCTATGGGATTaGGGTGTCTGTGTCAGGATTAGAATGCAGATCTCCCCATTAAGT +
Preference number: 1 (lower is better)
Translates to: SLVGEKDAHQPELWD*GVCVRIRMQISPLS
Trigger: ACTTAATGGGGAGATCTGCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCATCCTTCTCTCCTACAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
3UTR GCA 90 bp GTAGTGGTTCTCAAACTGTATCAAGCATCACGGTCTCCATCAGATTaGTATCCCTTACCCCAAGTTTCTGAATCAGTAGGTCTACAGTGG +
Preference number: 1 (lower is better)
Translates to: VVVLKLYQASRSPSD*YPLPQVSESVGLQW
Trigger: CCACTGTAGACCTACTGATTCAGAAACTTGGGGTAAGGGATAGCAATCTGATGGAGACCGTGATGCTTGATACAGTTTGAGAACCACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370832.1
3UTR CCA 90 bp TTTCATCTCTGGATAAAGTTCACAGTTTTCCTTCCATGGAGGAAGTaGTATCGAGTGAGACAGTCAGGCAGATCTGTACAAGGAGGAGTA +
Preference number: 1 (lower is better)
Translates to: FHLWIKFTVFLPWRK*YRVRQSGRSVQGGV
Trigger: TACTCCTCCTTGTACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACTGTGAACTTTATCCAGAGATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
3UTR-3UTR CCA 90 bp GAGAGAAGGATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGACTTCCATGGAGGAAGTaGTATCGAGTGAGACAGTCA +
Preference number: 2 (lower is better)
Translates to: ERRMLISQSYGIEVSVSGLPWRK*YRVRQS
Trigger: TGACTGTCTCACTCGATACCACTTCCTCCATGGAAG...TCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCATCCTTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
3UTR-3UTR CCA 90 bp ATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCTTGATGCCAGGAGTTCTTCCATGGAGGAAGTaGTATCGAGTGAGACAGTCA +
Preference number: 2 (lower is better)
Translates to: ISPSLFRRLRENRLMPGVLPWRK*YRVRQS
Trigger: TGACTGTCTCACTCGATACCACTTCCTCCATGGAAG...AACTCCTGGCATCAAGCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
3UTR-3UTR TCA 90 bp CCAAGATTTTGCATTTCAAATGACTACCCCCATGCTCCTGGTGCTGCTAGTTTACCAGAGCTATGGGATTaGGGTGTCTGTGTCAGGATT +
Preference number: 2 (lower is better)
Translates to: PRFCISNDYPHAPGAASLPELWD*GVCVRI
Trigger: AATCCTGACACAGACACCTCAATCCCATAGCTCTGG...TAAACTAGCAGCACCAGGAGCATGGGGGTAGTCATTTGAAATGCAAAATCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370832.1
3UTR-3UTR CCA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGACAGTTTTCCTTCCATaGAGGAAGTGGTATCGAGTG +
Preference number: 2 (lower is better)
Translates to: HLKQEDKSLSFQEAERESTVFLP*RKWYRV
Trigger: CACTCGATACCACTTCCTCCATGGAAGGAAAACTGT...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
3UTR-3UTR TCA 90 bp AATGCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGGAAGTGGTATCGAGTaGGACAGTCAGGCAGATCTG +
Preference number: 2 (lower is better)
Translates to: NADLPIKCFCLTFGPRLIGSGIE*DSQADL
Trigger: CAGATCTGCCTGACTGTCTCACTCGATACCACTTCC...AATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
3UTR-3UTR TCA 90 bp ATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCAGTTTGAGGCTGCAGTaGGTTATTATTGAAGGACTG +
Preference number: 2 (lower is better)
Translates to: ISSKKISPSLFRRLRENRSLRLQ*VIIEGL
Trigger: CAGTCCTTCAATAATAACTCACTGCAGCCTCAAACT...GCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
3UTR-3UTR TCA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGAGTTTGAGGCTGCAGTaGGTTATTATTGAAGGACTG +
Preference number: 2 (lower is better)
Translates to: HLKQEDKSLSFQEAERESSLRLQ*VIIEGL
Trigger: CAGTCCTTCAATAATAACTCACTGCAGCCTCAAACT...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
3UTR-3UTR TCA 90 bp AGATTTTGCATTTCAAATGACTACCCCCATGCTCCTGGTGCTGCTAGTTTAAGGTTGATGCCAGGAGTTTaGGGCTGCAGTGAGTTATTA +
Preference number: 2 (lower is better)
Translates to: RFCISNDYPHAPGAASLRLMPGV*GCSELL
Trigger: TAATAACTCACTGCAGCCTCAAACTCCTGGCATCAA...CCTTAAACTAGCAGCACCAGGAGCATGGGGGTAGTCATTTGAAATGCAAAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370832.1
3UTR-3UTR CCA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCAACAGTTTTCCTTCCATaGAGGAAGTGGTATCGAGTG +
Preference number: 2 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIATVFLP*RKWYRV
Trigger: CACTCGATACCACTTCCTCCATGGAAGGAAAACTGT...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
3UTR TCA 72 bp GGAGAGAAGGATGCTCATCAGCCAGAGCTATGGGATTaGGGTGTCTGTGTCAGGATTAGAATGCAGATCTCC +
Preference number: 3 (lower is better)
Translates to: GEKDAHQPELWD*GVCVRIRMQIS
Trigger: GGAGATCTGCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCATCCTTCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
3UTR TCA 72 bp TCACAGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTaGGACAGTCAGGCAGATCTGTACAAGGAGGAGTAC +
Preference number: 3 (lower is better)
Translates to: SQFSFHGGSGIE*DSQADLYKEEY
Trigger: GTACTCCTCCTTGTACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
3UTR GCA 72 bp TCTGAATCAGTAGGTCTACAGTGGAACCCAAGATTTTaGATTTCAAATGACTACCCCCATGCTCCTGGTGCT +
Preference number: 3 (lower is better)
Translates to: SESVGLQWNPRF*ISNDYPHAPGA
Trigger: AGCACCAGGAGCATGGGGGTAGTCATTTGAAATGCAAAATCTTGGGTTCCACTGTAGACCTACTGATTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370832.1
3UTR GCA 72 bp CTCAAACTGTATCAAGCATCACGGTCTCCATCAGATTaGTATCCCTTACCCCAAGTTTCTGAATCAGTAGGT +
Preference number: 3 (lower is better)
Translates to: LKLYQASRSPSD*YPLPQVSESVG
Trigger: ACCTACTGATTCAGAAACTTGGGGTAAGGGATAGCAATCTGATGGAGACCGTGATGCTTGATACAGTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370832.1
3UTR CCA 72 bp TGGATAAAGTTCACAGTTTTCCTTCCATGGAGGAAGTaGTATCGAGTGAGACAGTCAGGCAGATCTGTACAA +
Preference number: 3 (lower is better)
Translates to: WIKFTVFLPWRK*YRVRQSGRSVQ
Trigger: TTGTACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACTGTGAACTTTATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp GTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTAAGAAGTCGACACCCCTaGCACACCAACGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: VFLPWRKWYRVRQSGRSVRSRHP*HTNAPP
Trigger: TGGTGGAGCGTTGGTGTGTCAGGGGTGTCGACTTCT...TACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511190.5
CDS-3UTR CCA 90 bp AGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTGTGTGCCTGGGCTGCTaGCAGGTTTACCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SFPSMEEVVSSETVRQICVCLGC*QVYLQL
Trigger: AAGCTGGAGGTAAACCTGCCAGCAGCCCAGGCACAC...ACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp GTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTAGTGCCCCTGGGTGCCTaGCTTTGGAAAGCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: VFLPWRKWYRVRQSGRSVVPLGA*LWKALR
Trigger: CCTCAAAGCTTTCCAAAGCCAGGCACCCAGGGGCAC...TACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp ATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATTAGAATGCGGTGGGAGGATCACTTaGGTTCAGGAGGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: MLISQSYGIEVSVSGLECGGRIT*VQEVKA
Trigger: AGCCTTGACCTCCTGAACTCAAGTGATCCTCCCACC...GCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511190.5
CDS-3UTR GCA 90 bp AGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTCTTTTGAGAGAGGTGTaGCTGGGCTGCTGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: SFPSMEEVVSSETVRQICLLREV*LGCWQV
Trigger: AACCTGCCAGCAGCCCAGGCACACCTCTCTCAAAAG...ACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp GAGAGAAGGATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGAAGAAGATGTACCCAGTaGAACGCCTATCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ERRMLISQSYGIEVSVSGRRCTQ*NAYPPA
Trigger: TGCAGGAGGATAGGCGTTGCACTGGGTACATCTTCT...TCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCATCCTTCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp GAGAGAAGGATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGACAACGCTCCACCACGTaGCCACTTAACGATCGAAAA +
Preference number: 4 (lower is better)
Translates to: ERRMLISQSYGIEVSVSGQRSTT*PLNDRK
Trigger: TTTTCGATCGTTAAGTGGGCACGTGGTGGAGCGTTG...TCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCATCCTTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511190.5
CDS-3UTR CCA 90 bp ATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCGTGCCCCTGGGTGCCTaGCTTTGGAAAGCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: ISSKKISPSLFRRLRENRVPLGA*LWKALR
Trigger: CCTCAAAGCTTTCCAAAGCCAGGCACCCAGGGGCAC...GCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp ATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCTTGATGCCAGGAGTTAGCAAAGGCATCCTCTaGAGGACACCTGTCCCACTT +
Preference number: 4 (lower is better)
Translates to: ISPSLFRRLRENRLMPGVSKGIL*RTPVPL
Trigger: AAGTGGGACAGGTGTCCTTCAGAGGATGCCTTTGCT...AACTCCTGGCATCAAGCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCAGAGGTGTGCCTGGGCTaGTGGCAGGTTTACCTCCAG +
Preference number: 4 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIAEVCLG*WQVYLQ
Trigger: CTGGAGGTAAACCTGCCAGCAGCCCAGGCACACCTC...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCTTTTGAGAGAGGTGTaGCTGGGCTGCTGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: HLKQEDKSLSFQEAERESLLREV*LGCWQV
Trigger: AACCTGCCAGCAGCCCAGGCACACCTCTCTCAAAAG...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp AGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTAAAGCTTTGAGGCAGTaGCTGCTGAGGGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: SFPSMEEVVSSETVRQICKALRQ*LLRGLF
Trigger: GAACAAGCCCCTCAGCAGGCACTGCCTCAAAGCTTT...ACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp ATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCCAACGCCTATCCTCCTaGATCTGGGCCTCCTGGATA +
Preference number: 4 (lower is better)
Translates to: ISSKKISPSLFRRLRENRQRLSS*IWASWI
Trigger: TATCCAGGAGGCCCAGATGCAGGAGGATAGGCGTTG...GCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp GTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTATGCATCTGGGCCTCCTaGATACCTAACACCCGCATA +
Preference number: 4 (lower is better)
Translates to: VFLPWRKWYRVRQSGRSVCIWAS*IPNTRI
Trigger: TATGCGGGTGTTAGGTATCCAGGAGGCCCAGATGCA...TACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp AGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTTGCATCTGGGCCTCCTaGATACCTAACACCCGCATA +
Preference number: 4 (lower is better)
Translates to: SFPSMEEVVSSETVRQICCIWAS*IPNTRI
Trigger: TATGCGGGTGTTAGGTATCCAGGAGGCCCAGATGCA...ACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp ATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATTAGAATGCCTATCCTCCTGCATCTaGGCCTCCTGGATACCTAAC +
Preference number: 4 (lower is better)
Translates to: MLISQSYGIEVSVSGLECLSSCI*ASWIPN
Trigger: GTTAGGTATCCAGGAGGCCCAGATGCAGGAGGATAG...GCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp ATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATTAGAATGCTCCTCTTATTCCTTCTaGAGGGTCTCCTCTACCTCC +
Preference number: 4 (lower is better)
Translates to: MLISQSYGIEVSVSGLECSSYSF*RVSSTS
Trigger: GGAGGTAGAGGAGACCCTTCAGAAGGAATAAGAGGA...GCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGGGCTGCAGTGAGCTGTaGTTGCATCACTACACTCCA +
Preference number: 4 (lower is better)
Translates to: HLKQEDKSLSFQEAERESGCSEL*LHHYTP
Trigger: TGGAGTGTAGTGATGCAATCACAGCTCACTGCAGCC...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511190.5
CDS-3UTR GCA 90 bp ATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCAAAGCTTTGAGGCAGTaGCTGCTGAGGGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: ISSKKISPSLFRRLRENRKALRQ*LLRGLF
Trigger: GAACAAGCCCCTCAGCAGGCACTGCCTCAAAGCTTT...GCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGTTGTGTGCCCCTGGGTaGCTGGCTTTGGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: HLKQEDKSLSFQEAERESLCAPG*LALESF
Trigger: AAAGCTTTCCAAAGCCAGGCACCCAGGGGCACACAA...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp GAGAGAAGGATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGAAGAGTCTTCCCAAGATaGCTGACAACACTAATGAGC +
Preference number: 4 (lower is better)
Translates to: ERRMLISQSYGIEVSVSGRVFPR*LTTLMS
Trigger: GCTCATTAGTGTTGTCAGCCATCTTGGGAAGACTCT...TCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCATCCTTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp CCAAGATTTTGCATTTCAAATGACTACCCCCATGCTCCTGGTGCTGCTAGTTTAAGCAAAGGCATCCTCTaGAGGACACCTGTCCCACTT +
Preference number: 4 (lower is better)
Translates to: PRFCISNDYPHAPGAASLSKGIL*RTPVPL
Trigger: AAGTGGGACAGGTGTCCTTCAGAGGATGCCTTTGCT...TAAACTAGCAGCACCAGGAGCATGGGGGTAGTCATTTGAAATGCAAAATCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370832.1
CDS-3UTR TCA 90 bp ATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATTAGAATGCCCAGCTTTGTGGAACTaGCAAAGTGAGGTATCTTCC +
Preference number: 4 (lower is better)
Translates to: MLISQSYGIEVSVSGLECPALWN*QSEVSS
Trigger: GGAAGATACCTCACTTTGTCAGTTCCACAAAGCTGG...GCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp AGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTCCAGCTTTGTGGAACTaGCAAAGTGAGGTATCTTCC +
Preference number: 4 (lower is better)
Translates to: SFPSMEEVVSSETVRQICPALWN*QSEVSS
Trigger: GGAAGATACCTCACTTTGTCAGTTCCACAAAGCTGG...ACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGTCCTCTTATTCCTTCTaGAGGGTCTCCTCTACCTCC +
Preference number: 4 (lower is better)
Translates to: HLKQEDKSLSFQEAERESSSYSF*RVSSTS
Trigger: GGAGGTAGAGGAGACCCTTCAGAAGGAATAAGAGGA...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp ATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCCCAGAGCTATGGGATTaGGGTGTCTGTGTCAGGATT +
Preference number: 4 (lower is better)
Translates to: ISSKKISPSLFRRLRENRPELWD*GVCVRI
Trigger: AATCCTGACACAGACACCTCAATCCCATAGCTCTGG...GCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp GAGAGAAGGATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGAAGTTTGAGGCTGCAGTaGGTTATTATTGAAGGACTG +
Preference number: 4 (lower is better)
Translates to: ERRMLISQSYGIEVSVSGSLRLQ*VIIEGL
Trigger: CAGTCCTTCAATAATAACTCACTGCAGCCTCAAACT...TCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCATCCTTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp ATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATTAGAATGCGCTTGGGTAACAGAGTaGGACTCAATCAACCCTTGT +
Preference number: 4 (lower is better)
Translates to: MLISQSYGIEVSVSGLECAWVTE*DSINPC
Trigger: ACAAGGGTTGATTGAGTCTCACTCTGTTACCCAAGC...GCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511190.5
CDS-3UTR TCA 90 bp ATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCAGGTCAAGGCTGCAGTaGGCTGTGATTGCATCACTA +
Preference number: 4 (lower is better)
Translates to: ISSKKISPSLFRRLRENRRSRLQ*AVIASL
Trigger: TAGTGATGCAATCACAGCTCACTGCAGCCTTGACCT...GCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511190.5
CDS-3UTR GCA 90 bp ATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATTAGAATGCAGCCTACTGAATGAGTaGACTCCAACGGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: MLISQSYGIEVSVSGLECSLLNE*TPTEVL
Trigger: CAAGACTTCCGTTGGAGTGCACTCATTCAGTAGGCT...GCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp AATGCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGAGGTGTGCCTGGGCTaGTGGCAGGTTTACCTCCAG +
Preference number: 4 (lower is better)
Translates to: NADLPIKCFCLTFGPRLIEVCLG*WQVYLQ
Trigger: CTGGAGGTAAACCTGCCAGCAGCCCAGGCACACCTC...AATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGAGAAGATGTACCCAGTaGAACGCCTATCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HLKQEDKSLSFQEAERESRRCTQ*NAYPPA
Trigger: TGCAGGAGGATAGGCGTTGCACTGGGTACATCTTCT...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp ATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATTAGAATGCTGTAGGAGAGAAGGATaGTCATCAGCCAGAGCTATG +
Preference number: 4 (lower is better)
Translates to: MLISQSYGIEVSVSGLECCRREG*SSARAM
Trigger: CATAGCTCTGGCTGATGAGCATCCTTCTCTCCTACA...GCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp AGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTAGGTGTTTCCCAAATTaGGGAGGCCGTGGCATATTT +
Preference number: 4 (lower is better)
Translates to: SFPSMEEVVSSETVRQICRCFPN*GGRGIF
Trigger: AAATATGCCACGGCCTCCCCAATTTGGGAAACACCT...ACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp GTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTAGGCAAGAAAACCCACTaGTGTCAGGATCATCAGCAA +
Preference number: 4 (lower is better)
Translates to: VFLPWRKWYRVRQSGRSVGKKTH*CQDHQQ
Trigger: TTGCTGATGATCCTGACACCAGTGGGTTTTCTTGCC...TACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp AGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTGGCAAGAAAACCCACTaGTGTCAGGATCATCAGCAA +
Preference number: 4 (lower is better)
Translates to: SFPSMEEVVSSETVRQICGKKTH*CQDHQQ
Trigger: TTGCTGATGATCCTGACACCAGTGGGTTTTCTTGCC...ACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp GTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTAGAGCCAGGATATCTTTaGATTCCTTTGTTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: VFLPWRKWYRVRQSGRSVEPGYL*IPLLQA
Trigger: GGCCTGCAACAAAGGAATCCAAAGATATCCTGGCTC...TACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp GAGAGAAGGATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGAATCAACCCTTGTGGTTaGCTGCTATATAGAACAGAG +
Preference number: 4 (lower is better)
Translates to: ERRMLISQSYGIEVSVSGINPCG*LLYRTE
Trigger: CTCTGTTCTATATAGCAGCCAACCACAAGGGTTGAT...TCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCATCCTTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511190.5
CDS-3UTR TCA 90 bp ATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATTAGAATGCCAGGCCATGATACACTaGTGTTTCCAGAAGTCATCT +
Preference number: 4 (lower is better)
Translates to: MLISQSYGIEVSVSGLECQAMIH*CFQKSS
Trigger: AGATGACTTCTGGAAACATCAGTGTATCATGGCCTG...GCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp AGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTCTTTGTTGCAGGCCATaGTACACTGATGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SFPSMEEVVSSETVRQICLCCRP*YTDVSR
Trigger: TCTGGAAACATCAGTGTATCATGGCCTGCAACAAAG...ACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp ATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCTTGAAAGTCAACTTTTaGGAGAGGTGTGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ISSKKISPSLFRRLRENRLKVNF*ERCAWA
Trigger: AGCCCAGGCACACCTCTCTCAAAAGTTGACTTTCAA...GCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp GAGAGAAGGATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGAGCATATCATCGTAAGTaGACCAGATCTGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: ERRMLISQSYGIEVSVSGAYHRK*TRSVSQ
Trigger: TTGAGAAACAGATCTGGTTCACTTACGATGATATGC...TCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCATCCTTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCAGGAAGTGGTATCGAGTaGGACAGTCAGGCAGATCTG +
Preference number: 4 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIAGSGIE*DSQADL
Trigger: CAGATCTGCCTGACTGTCTCACTCGATACCACTTCC...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp ATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCTTGATGCCAGGAGTTTTGATGCCAGGAGTTTaGGGCTGCAGTGAGTTATTA +
Preference number: 4 (lower is better)
Translates to: ISPSLFRRLRENRLMPGVLMPGV*GCSELL
Trigger: TAATAACTCACTGCAGCCTCAAACTCCTGGCATCAA...AACTCCTGGCATCAAGCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp ATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATTAGAATGCATTTTGCATTTCAAATaGCTACCCCCATGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: MLISQSYGIEVSVSGLECILHFK*LPPCSW
Trigger: CCAGGAGCATGGGGGTAGTCATTTGAAATGCAAAAT...GCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370832.1
CDS-3UTR GCA 90 bp GAGAGAAGGATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGACCAACGGAAGTCTTGTaGTCACATTTTGCACATTTA +
Preference number: 4 (lower is better)
Translates to: ERRMLISQSYGIEVSVSGPTEVL*SHFAHL
Trigger: TAAATGTGCAAAATGTGAGCACAAGACTTCCGTTGG...TCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCATCCTTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp AGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTTTTCCAAGGTACTTTTaGTGCTGTCTTCTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: SFPSMEEVVSSETVRQICFPRYF*CCLLLA
Trigger: GGCAAGCAGAAGACAGCAGCAAAAGTACCTTGGAAA...ACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCATTGTGTGCCCCTGGGTaGCTGGCTTTGGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIALCAPG*LALESF
Trigger: AAAGCTTTCCAAAGCCAGGCACCCAGGGGCACACAA...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp ATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCCGGTCTCCATCAGATTaGTATCCCTTACCCCAAGTT +
Preference number: 4 (lower is better)
Translates to: ISSKKISPSLFRRLRENRRSPSD*YPLPQV
Trigger: AACTTGGGGTAAGGGATAGCAATCTGATGGAGACCG...GCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370832.1
CDS-3UTR CCA 90 bp CCAAGATTTTGCATTTCAAATGACTACCCCCATGCTCCTGGTGCTGCTAGTTTAACCAGGTCTCACAGGTaGCTGAACCTCGTTTTGATG +
Preference number: 4 (lower is better)
Translates to: PRFCISNDYPHAPGAASLTRSHR*LNLVLM
Trigger: CATCAAAACGAGGTTCAGCCACCTGTGAGACCTGGT...TAAACTAGCAGCACCAGGAGCATGGGGGTAGTCATTTGAAATGCAAAATCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370832.1
CDS-3UTR CCA 90 bp AGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTTTCTGTGCATTGCCATaGAATATCTCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SFPSMEEVVSSETVRQICFCALP*NISAAA
Trigger: AGCAGCTGCAGAGATATTCCATGGCAATGCACAGAA...ACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCTTCCATGGAGGAAGTaGTATCGAGTGAGACAGTCA +
Preference number: 4 (lower is better)
Translates to: HLKQEDKSLSFQEAERESLPWRK*YRVRQS
Trigger: TGACTGTCTCACTCGATACCACTTCCTCCATGGAAG...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp GTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTATTCCAGTGGCGTTCATaGTGCATGAAGATTCACATT +
Preference number: 4 (lower is better)
Translates to: VFLPWRKWYRVRQSGRSVFQWRS*CMKIHI
Trigger: AATGTGAATCTTCATGCATCATGAACGCCACTGGAA...TACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp ATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATTAGAATGCTTCCAGTGGCGTTCATaGTGCATGAAGATTCACATT +
Preference number: 4 (lower is better)
Translates to: MLISQSYGIEVSVSGLECFQWRS*CMKIHI
Trigger: AATGTGAATCTTCATGCATCATGAACGCCACTGGAA...GCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp AGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTCCCCATGGGAAACTCTaGTTAAGTAAATCATCAGCA +
Preference number: 4 (lower is better)
Translates to: SFPSMEEVVSSETVRQICPHGKL*LSKSSA
Trigger: TGCTGATGATTTACTTAATCAGAGTTTCCCATGGGG...ACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp GTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTAGTCTTGAGAATAACCTaGCCACAAGCTTTACAAGCA +
Preference number: 4 (lower is better)
Translates to: VFLPWRKWYRVRQSGRSVVLRIT*PQALQA
Trigger: TGCTTGTAAAGCTTGTGGTCAGGTTATTCTCAAGAC...TACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp GAGAGAAGGATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGAGTGCCTTCATTGCAATaGGAAGACACCTTTAAATAT +
Preference number: 4 (lower is better)
Translates to: ERRMLISQSYGIEVSVSGVPSLQ*EDTFKY
Trigger: ATATTTAAAGGTGTCTTCTCATTGCAATGAAGGCAC...TCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCATCCTTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp CCAAGATTTTGCATTTCAAATGACTACCCCCATGCTCCTGGTGCTGCTAGTTTATTCAGACTCCTTATCTaGTCCAATGTGTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PRFCISNDYPHAPGAASLFRLLI*SNVWSQ
Trigger: CTGGCTCCACACATTGGATCAGATAAGGAGTCTGAA...TAAACTAGCAGCACCAGGAGCATGGGGGTAGTCATTTGAAATGCAAAATCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370832.1
CDS-3UTR TCA 90 bp GTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTAACGGTTCTTTTTCAATaGATGCTCGATCTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: VFLPWRKWYRVRQSGRSVTVLFQ*MLDLLS
Trigger: ACTCAGGAGATCGAGCATTCATTGAAAAAGAACCGT...TACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCACCAGAGCTATGGGATTaGGGTGTCTGTGTCAGGATT +
Preference number: 4 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIAPELWD*GVCVRI
Trigger: AATCCTGACACAGACACCTCAATCCCATAGCTCTGG...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp GAGAGAAGGATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATGTCCCACTTCCTTTTaGTATCTCAAAAGATTTGCT +
Preference number: 4 (lower is better)
Translates to: ERRMLISQSYGIEVSVSGCPTSF*YLKRFA
Trigger: AGCAAATCTTTTGAGATAGCAAAAGGAAGTGGGACA...TCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCATCCTTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp ATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATTAGAATGCATGAGCATCGTTCTGTaGATTGCCATGGAATATCTC +
Preference number: 4 (lower is better)
Translates to: MLISQSYGIEVSVSGLECMSIVL*IAMEYL
Trigger: GAGATATTCCATGGCAATGCACAGAACGATGCTCAT...GCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp AGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTATGAGCATCGTTCTGTaGATTGCCATGGAATATCTC +
Preference number: 4 (lower is better)
Translates to: SFPSMEEVVSSETVRQICMSIVL*IAMEYL
Trigger: GAGATATTCCATGGCAATGCACAGAACGATGCTCAT...ACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp ACAGTAGTGGTTCTCAAACTGTATCAAGCATCACGGTCTCCATCAGATTGCTATCCAAGGTACTTTTGCTaGTGTCTTCTGCTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: TVVVLKLYQASRSPSDCYPRYFC*CLLLAP
Trigger: AGGGGCAAGCAGAAGACAGCAGCAAAAGTACCTTGG...ATAGCAATCTGATGGAGACCGTGATGCTTGATACAGTTTGAGAACCACTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370832.1
CDS-3UTR GCA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCACCAAGGTACTTTTGCTaGTGTCTTCTGCTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIAPRYFC*CLLLAP
Trigger: AGGGGCAAGCAGAAGACAGCAGCAAAAGTACCTTGG...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp AATGCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTCAACGCCTATCCTCCTaGATCTGGGCCTCCTGGATA +
Preference number: 4 (lower is better)
Translates to: NADLPIKCFCLTFGPRLIQRLSS*IWASWI
Trigger: TATCCAGGAGGCCCAGATGCAGGAGGATAGGCGTTG...AATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGTCCAGTCCCTCCTGCTaGTGTCTCTTAAATAGTTTG +
Preference number: 4 (lower is better)
Translates to: HLKQEDKSLSFQEAERESSSPSC*CLLNSL
Trigger: CAAACTATTTAAGAGACAGCAGCAGGAGGGACTGGA...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511190.5
CDS-3UTR GCA 90 bp ATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATTAGAATGCACCCTTGTGGTTGGCTaGTATATAGAACAGAGACTA +
Preference number: 4 (lower is better)
Translates to: MLISQSYGIEVSVSGLECTLVVG*YIEQRL
Trigger: TAGTCTCTGTTCTATATAGCAGCCAACCACAAGGGT...GCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511190.5
CDS-3UTR CCA 90 bp AGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTAAATTGGGGAGGCCGTaGCATATTTTCTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: SFPSMEEVVSSETVRQICKLGRP*HIFSGN
Trigger: ATTTCCAGAGAAAATATGCCACGGCCTCCCCAATTT...ACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp AGATTTTGCATTTCAAATGACTACCCCCATGCTCCTGGTGCTGCTAGTTTAAGGGAGCCAGGATATCTTTaGATTCCTTTGTTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RFCISNDYPHAPGAASLREPGYL*IPLLQA
Trigger: GGCCTGCAACAAAGGAATCCAAAGATATCCTGGCTC...CCTTAAACTAGCAGCACCAGGAGCATGGGGGTAGTCATTTGAAATGCAAAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370832.1
CDS-3UTR CCA 90 bp ATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCAGAGTCTTCCCAAGATaGCTGACAACACTAATGAGC +
Preference number: 4 (lower is better)
Translates to: ISSKKISPSLFRRLRENRRVFPR*LTTLMS
Trigger: GCTCATTAGTGTTGTCAGCCATCTTGGGAAGACTCT...GCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp ATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCACAGTTTTCCTTCCATaGAGGAAGTGGTATCGAGTG +
Preference number: 4 (lower is better)
Translates to: ISSKKISPSLFRRLRENRTVFLP*RKWYRV
Trigger: CACTCGATACCACTTCCTCCATGGAAGGAAAACTGT...GCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGTTCCTCTTCTTGTGCTaGTTTTCTGATAACTCTCCG +
Preference number: 4 (lower is better)
Translates to: HLKQEDKSLSFQEAERESFLFLC*FSDNSP
Trigger: CGGAGAGTTATCAGAAAATCAGCACAAGAAGAGGAA...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGGTCTTGAGAATAACCTaGCCACAAGCTTTACAAGCA +
Preference number: 4 (lower is better)
Translates to: HLKQEDKSLSFQEAERESVLRIT*PQALQA
Trigger: TGCTTGTAAAGCTTGTGGTCAGGTTATTCTCAAGAC...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp GTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTATTCTTTGGGGAAGGTTaGTGGAGAGGTAATTATTCA +
Preference number: 4 (lower is better)
Translates to: VFLPWRKWYRVRQSGRSVFFGEG*WRGNYS
Trigger: TGAATAATTACCTCTCCATCAACCTTCCCCAAAGAA...TACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCATTCAGACTCCTTATCTaGTCCAATGTGTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIAFRLLI*SNVWSQ
Trigger: CTGGCTCCACACATTGGATCAGATAAGGAGTCTGAA...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGACGGTTCTTTTTCAATaGATGCTCGATCTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: HLKQEDKSLSFQEAERESTVLFQ*MLDLLS
Trigger: ACTCAGGAGATCGAGCATTCATTGAAAAAGAACCGT...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp GTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTAGCATATCATCGTAAGTaGACCAGATCTGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: VFLPWRKWYRVRQSGRSVAYHRK*TRSVSQ
Trigger: TTGAGAAACAGATCTGGTTCACTTACGATGATATGC...TACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp ATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATTAGAATGCACACCTCGAACAATCTaGCTTGGATTTCTTGTATTC +
Preference number: 4 (lower is better)
Translates to: MLISQSYGIEVSVSGLECTPRTI*LGFLVF
Trigger: GAATACAAGAAATCCAAGGCAGATTGTTCGAGGTGT...GCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp ACAGTAGTGGTTCTCAAACTGTATCAAGCATCACGGTCTCCATCAGATTGCTATAGCCTACTGAATGAGTaGACTCCAACGGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: TVVVLKLYQASRSPSDCYSLLNE*TPTEVL
Trigger: CAAGACTTCCGTTGGAGTGCACTCATTCAGTAGGCT...ATAGCAATCTGATGGAGACCGTGATGCTTGATACAGTTTGAGAACCACTACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370832.1
CDS-3UTR GCA 90 bp ACAGTAGTGGTTCTCAAACTGTATCAAGCATCACGGTCTCCATCAGATTGCTATTGTAGGAGAGAAGGATaGTCATCAGCCAGAGCTATG +
Preference number: 4 (lower is better)
Translates to: TVVVLKLYQASRSPSDCYCRREG*SSARAM
Trigger: CATAGCTCTGGCTGATGAGCATCCTTCTCTCCTACA...ATAGCAATCTGATGGAGACCGTGATGCTTGATACAGTTTGAGAACCACTACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370832.1
CDS-3UTR GCA 90 bp ATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCTTGATGCCAGGAGTTTTATTATTGAAGGACTaGACTCTAGCCAGGATGACA +
Preference number: 4 (lower is better)
Translates to: ISPSLFRRLRENRLMPGVLLLKD*TLARMT
Trigger: TGTCATCCTGGCTAGAGTGCAGTCCTTCAATAATAA...AACTCCTGGCATCAAGCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp ATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCTTGATGCCAGGAGTTTTGCAGTTCCCTATTTaGACAAAACCACGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: ISPSLFRRLRENRLMPGVLQFPI*TKPRRN
Trigger: ATTCCTACGTGGTTTTGTCCAAATAGGGAACTGCAA...AACTCCTGGCATCAAGCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp ATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCAAATTGGGGAGGCCGTaGCATATTTTCTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: ISSKKISPSLFRRLRENRKLGRP*HIFSGN
Trigger: ATTTCCAGAGAAAATATGCCACGGCCTCCCCAATTT...GCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCAAGGTGTTTCCCAAATTaGGGAGGCCGTGGCATATTT +
Preference number: 4 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIARCFPN*GGRGIF
Trigger: AAATATGCCACGGCCTCCCCAATTTGGGAAACACCT...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGTTCTTGGATTCTTATTaGAACCCAGTGCAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: HLKQEDKSLSFQEAERESFLDSY*NPVQVG
Trigger: CCCTACTTGCACTGGGTTCCAATAAGAATCCAAGAA...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp ATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCTTCTTGGATTCTTATTaGAACCCAGTGCAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: ISSKKISPSLFRRLRENRFLDSY*NPVQVG
Trigger: CCCTACTTGCACTGGGTTCCAATAAGAATCCAAGAA...GCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp AATGCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTCTATCCTCCTGCATCTaGGCCTCCTGGATACCTAAC +
Preference number: 4 (lower is better)
Translates to: NADLPIKCFCLTFGPRLILSSCI*ASWIPN
Trigger: GTTAGGTATCCAGGAGGCCCAGATGCAGGAGGATAG...AATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGTTCTTTGGGGAAGGTTaGTGGAGAGGTAATTATTCA +
Preference number: 4 (lower is better)
Translates to: HLKQEDKSLSFQEAERESFFGEG*WRGNYS
Trigger: TGAATAATTACCTCTCCATCAACCTTCCCCAAAGAA...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp ATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCTTGATGCCAGGAGTTAGATCAAAAGTAGACTaGATAGATGAAGGATGTGCT +
Preference number: 4 (lower is better)
Translates to: ISPSLFRRLRENRLMPGVRSKVD*IDEGCA
Trigger: AGCACATCCTTCATCTATTCAGTCTACTTTTGATCT...AACTCCTGGCATCAAGCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp ATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATTAGAATGCAGATCAAAAGTAGACTaGATAGATGAAGGATGTGCT +
Preference number: 4 (lower is better)
Translates to: MLISQSYGIEVSVSGLECRSKVD*IDEGCA
Trigger: AGCACATCCTTCATCTATTCAGTCTACTTTTGATCT...GCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCACTTTGTTGCAGGCCATaGTACACTGATGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIALCCRP*YTDVSR
Trigger: TCTGGAAACATCAGTGTATCATGGCCTGCAACAAAG...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp ATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATTAGAATGCAGATACGTCATTAAGTaGGCTAACGGTTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: MLISQSYGIEVSVSGLECRYVIK*ANGSFS
Trigger: TGAAAAAGAACCGTTAGCTCACTTAATGACGTATCT...GCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp ACAGTAGTGGTTCTCAAACTGTATCAAGCATCACGGTCTCCATCAGATTGCTATGTGGAACTGACAAAGTaGGGTATCTTCCAGATACGT +
Preference number: 4 (lower is better)
Translates to: TVVVLKLYQASRSPSDCYVELTK*GIFQIR
Trigger: ACGTATCTGGAAGATACCTCACTTTGTCAGTTCCAC...ATAGCAATCTGATGGAGACCGTGATGCTTGATACAGTTTGAGAACCACTACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370832.1
CDS-3UTR TCA 90 bp ATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCTTTTCGGGCACTGTTTaGAAGTCAACTTTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: ISSKKISPSLFRRLRENRFSGTV*KSTFER
Trigger: TCTCTCAAAAGTTGACTTTCAAACAGTGCCCGAAAA...GCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGGCACTCCTTAACTCTTaGAGTTTTCTACAATCCAGT +
Preference number: 4 (lower is better)
Translates to: HLKQEDKSLSFQEAERESALLNS*SFLQSS
Trigger: ACTGGATTGTAGAAAACTTCAAGAGTTAAGGAGTGC...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511190.5
CDS-3UTR GCA 90 bp ACAGTAGTGGTTCTCAAACTGTATCAAGCATCACGGTCTCCATCAGATTGCTATCATCGTTCTGTGCATTaGCATGGAATATCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TVVVLKLYQASRSPSDCYHRSVH*HGISLQ
Trigger: CTGCAGAGATATTCCATGGCAATGCACAGAACGATG...ATAGCAATCTGATGGAGACCGTGATGCTTGATACAGTTTGAGAACCACTACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370832.1
CDS-3UTR GCA 90 bp GAACATGAAAAACACAATTTCAGTCTTGTAGGAGAGAAGGATGCTCATCAGCCACTGCTGTCTTCTGCTTaGCCCTTTAAAGACTGTCTG +
Preference number: 4 (lower is better)
Translates to: EHEKHNFSLVGEKDAHQPLLSSA*PFKDCL
Trigger: CAGACAGTCTTTAAAGGGGCAAGCAGAAGACAGCAG...TGGCTGATGAGCATCCTTCTCTCCTACAAGACTGAAATTGTGTTTTTCATGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCATTTCCAAGGTACTTTTaGTGCTGTCTTCTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIAFPRYF*CCLLLA
Trigger: GGCAAGCAGAAGACAGCAGCAAAAGTACCTTGGAAA...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGTGGAACCCAAGATTTTaGATTTCAAATGACTACCCC +
Preference number: 4 (lower is better)
Translates to: HLKQEDKSLSFQEAERESWNPRF*ISNDYP
Trigger: GGGGTAGTCATTTGAAATGCAAAATCTTGGGTTCCA...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370832.1
CDS-3UTR CCA 90 bp AATGCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTACCAGGTCTCACAGGTaGCTGAACCTCGTTTTGATG +
Preference number: 4 (lower is better)
Translates to: NADLPIKCFCLTFGPRLITRSHR*LNLVLM
Trigger: CATCAAAACGAGGTTCAGCCACCTGTGAGACCTGGT...AATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp AGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTAAGCTTTACAAGCAATaGAGTGCAACAACTCTAACT +
Preference number: 4 (lower is better)
Translates to: SFPSMEEVVSSETVRQICKLYKQ*SATTLT
Trigger: AGTTAGAGTTGTTGCACTCCATTGCTTGTAAAGCTT...ACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp GAACATGAAAAACACAATTTCAGTCTTGTAGGAGAGAAGGATGCTCATCAGCCACTTCCATGGAGGAAGTaGTATCGAGTGAGACAGTCA +
Preference number: 4 (lower is better)
Translates to: EHEKHNFSLVGEKDAHQPLPWRK*YRVRQS
Trigger: TGACTGTCTCACTCGATACCACTTCCTCCATGGAAG...TGGCTGATGAGCATCCTTCTCTCCTACAAGACTGAAATTGTGTTTTTCATGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCATTCCTCTTCTTGTGCTaGTTTTCTGATAACTCTCCG +
Preference number: 4 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIAFLFLC*FSDNSP
Trigger: CGGAGAGTTATCAGAAAATCAGCACAAGAAGAGGAA...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp GAACATGAAAAACACAATTTCAGTCTTGTAGGAGAGAAGGATGCTCATCAGCCACAGGCCATGATACACTaGTGTTTCCAGAAGTCATCT +
Preference number: 4 (lower is better)
Translates to: EHEKHNFSLVGEKDAHQPQAMIH*CFQKSS
Trigger: AGATGACTTCTGGAAACATCAGTGTATCATGGCCTG...TGGCTGATGAGCATCCTTCTCTCCTACAAGACTGAAATTGTGTTTTTCATGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp ATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCAGATACGTCATTAAGTaGGCTAACGGTTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: ISSKKISPSLFRRLRENRRYVIK*ANGSFS
Trigger: TGAAAAAGAACCGTTAGCTCACTTAATGACGTATCT...GCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp GAACATGAAAAACACAATTTCAGTCTTGTAGGAGAGAAGGATGCTCATCAGCCAGTGGAACTGACAAAGTaGGGTATCTTCCAGATACGT +
Preference number: 4 (lower is better)
Translates to: EHEKHNFSLVGEKDAHQPVELTK*GIFQIR
Trigger: ACGTATCTGGAAGATACCTCACTTTGTCAGTTCCAC...TGGCTGATGAGCATCCTTCTCTCCTACAAGACTGAAATTGTGTTTTTCATGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp GAACATGAAAAACACAATTTCAGTCTTGTAGGAGAGAAGGATGCTCATCAGCCATTGATGCCAGGAGTTTaGGGCTGCAGTGAGTTATTA +
Preference number: 4 (lower is better)
Translates to: EHEKHNFSLVGEKDAHQPLMPGV*GCSELL
Trigger: TAATAACTCACTGCAGCCTCAAACTCCTGGCATCAA...TGGCTGATGAGCATCCTTCTCTCCTACAAGACTGAAATTGTGTTTTTCATGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGTGTCCCACTTCCTTTTaGTATCTCAAAAGATTTGCT +
Preference number: 4 (lower is better)
Translates to: HLKQEDKSLSFQEAERESCPTSF*YLKRFA
Trigger: AGCAAATCTTTTGAGATAGCAAAAGGAAGTGGGACA...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp GAACATGAAAAACACAATTTCAGTCTTGTAGGAGAGAAGGATGCTCATCAGCCATTCTGTGCATTGCCATaGAATATCTCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: EHEKHNFSLVGEKDAHQPFCALP*NISAAA
Trigger: AGCAGCTGCAGAGATATTCCATGGCAATGCACAGAA...TGGCTGATGAGCATCCTTCTCTCCTACAAGACTGAAATTGTGTTTTTCATGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp AGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTATATTTCTTTCGTTTTaGATTTTCGGGCACTGTTTG +
Preference number: 4 (lower is better)
Translates to: SFPSMEEVVSSETVRQICIFLSF*IFGHCL
Trigger: CAAACAGTGCCCGAAAATCCAAAACGAAAGAAATAT...ACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp GTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTAATATTTCTTTCGTTTTaGATTTTCGGGCACTGTTTG +
Preference number: 4 (lower is better)
Translates to: VFLPWRKWYRVRQSGRSVIFLSF*IFGHCL
Trigger: CAAACAGTGCCCGAAAATCCAAAACGAAAGAAATAT...TACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCACTCTTAAATAGTTTGTaGAAGAAGTCGACACCCCTG +
Preference number: 4 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIALLNSL*KKSTPL
Trigger: CAGGGGTGTCGACTTCTTCCACAAACTATTTAAGAG...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511190.5
CDS-3UTR TCA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCAGGCGTTCATGATGCATaGAGATTCACATTCCAATTT +
Preference number: 4 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIAGVHDA*RFTFQF
Trigger: AAATTGGAATGTGAATCTTCATGCATCATGAACGCC...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCATATCTCTGCAGCTGCTaGAATGGCCTTTTTAAGATT +
Preference number: 4 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIAYLCSC*NGLFKI
Trigger: AATCTTAAAAAGGCCATTTCAGCAGCTGCAGAGATA...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp AATGCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTCTTACCCCAAGTTTCTaGATCAGTAGGTCTACAGTG +
Preference number: 4 (lower is better)
Translates to: NADLPIKCFCLTFGPRLILTPSF*ISRSTV
Trigger: CACTGTAGACCTACTGATTCAGAAACTTGGGGTAAG...AATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370832.1
CDS-3UTR GCA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCACCAACGGAAGTCTTGTaGTCACATTTTGCACATTTA +
Preference number: 4 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIAPTEVL*SHFAHL
Trigger: TAAATGTGCAAAATGTGAGCACAAGACTTCCGTTGG...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp GAACATGAAAAACACAATTTCAGTCTTGTAGGAGAGAAGGATGCTCATCAGCCAGTCTGGTGCCTTCATTaGAATGAGAAGACACCTTTA +
Preference number: 4 (lower is better)
Translates to: EHEKHNFSLVGEKDAHQPVWCLH*NEKTPL
Trigger: TAAAGGTGTCTTCTCATTGCAATGAAGGCACCAGAC...TGGCTGATGAGCATCCTTCTCTCCTACAAGACTGAAATTGTGTTTTTCATGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCACACTGTATTAGAACATaGAAAGAGGCAGGAAGATTG +
Preference number: 4 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIAHCIRT*KEAGRL
Trigger: CAATCTTCCTGCCTCTTTCCATGTTCTAATACAGTG...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370832.1
CDS-3UTR TCA 90 bp GAACATGAAAAACACAATTTCAGTCTTGTAGGAGAGAAGGATGCTCATCAGCCATTTTCGGGCACTGTTTaGAAGTCAACTTTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: EHEKHNFSLVGEKDAHQPFSGTV*KSTFER
Trigger: TCTCTCAAAAGTTGACTTTCAAACAGTGCCCGAAAA...TGGCTGATGAGCATCCTTCTCTCCTACAAGACTGAAATTGTGTTTTTCATGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp AATGCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTAGTTTGAGGCTGCAGTaGGTTATTATTGAAGGACTG +
Preference number: 4 (lower is better)
Translates to: NADLPIKCFCLTFGPRLISLRLQ*VIIEGL
Trigger: CAGTCCTTCAATAATAACTCACTGCAGCCTCAAACT...AATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp AATGCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGTCTGGTGCCTTCATTaGAATGAGAAGACACCTTTA +
Preference number: 4 (lower is better)
Translates to: NADLPIKCFCLTFGPRLIVWCLH*NEKTPL
Trigger: TAAAGGTGTCTTCTCATTGCAATGAAGGCACCAGAC...AATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp GAACATGAAAAACACAATTTCAGTCTTGTAGGAGAGAAGGATGCTCATCAGCCATTATTATTGAAGGACTaGACTCTAGCCAGGATGACA +
Preference number: 4 (lower is better)
Translates to: EHEKHNFSLVGEKDAHQPLLLKD*TLARMT
Trigger: TGTCATCCTGGCTAGAGTGCAGTCCTTCAATAATAA...TGGCTGATGAGCATCCTTCTCTCCTACAAGACTGAAATTGTGTTTTTCATGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp AATGCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTAGTTCCAATCTGTTTTaGAAGTTCAGCTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: NADLPIKCFCLTFGPRLISSNLF*KFSSTR
Trigger: CCTTGTGGAGCTGAACTTGCAAAACAGATTGGAACT...AATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511190.5
CDS-3UTR CCA 90 bp GAACATGAAAAACACAATTTCAGTCTTGTAGGAGAGAAGGATGCTCATCAGCCATTGCAGTTCCCTATTTaGACAAAACCACGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: EHEKHNFSLVGEKDAHQPLQFPI*TKPRRN
Trigger: ATTCCTACGTGGTTTTGTCCAAATAGGGAACTGCAA...TGGCTGATGAGCATCCTTCTCTCCTACAAGACTGAAATTGTGTTTTTCATGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCAAAGCTTTACAAGCAATaGAGTGCAACAACTCTAACT +
Preference number: 4 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIAKLYKQ*SATTLT
Trigger: AGTTAGAGTTGTTGCACTCCATTGCTTGTAAAGCTT...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp AATGCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTTATCTCTGCAGCTGCTaGAATGGCCTTTTTAAGATT +
Preference number: 4 (lower is better)
Translates to: NADLPIKCFCLTFGPRLIYLCSC*NGLFKI
Trigger: AATCTTAAAAAGGCCATTTCAGCAGCTGCAGAGATA...AATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp AATGCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTACACCTCGAACAATCTaGCTTGGATTTCTTGTATTC +
Preference number: 4 (lower is better)
Translates to: NADLPIKCFCLTFGPRLITPRTI*LGFLVF
Trigger: GAATACAAGAAATCCAAGGCAGATTGTTCGAGGTGT...AATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR GCA 90 bp ACAGTAGTGGTTCTCAAACTGTATCAAGCATCACGGTCTCCATCAGATTGCTATTTACAAGCAATGGAGTaGAACAACTCTAACTCAAAA +
Preference number: 4 (lower is better)
Translates to: TVVVLKLYQASRSPSDCYLQAME*NNSNSK
Trigger: TTTTGAGTTAGAGTTGTTGCACTCCATTGCTTGTAA...ATAGCAATCTGATGGAGACCGTGATGCTTGATACAGTTTGAGAACCACTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370832.1
CDS-3UTR GCA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCATTACAAGCAATGGAGTaGAACAACTCTAACTCAAAA +
Preference number: 4 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIALQAME*NNSNSK
Trigger: TTTTGAGTTAGAGTTGTTGCACTCCATTGCTTGTAA...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CCA 90 bp GAACATGAAAAACACAATTTCAGTCTTGTAGGAGAGAAGGATGCTCATCAGCCATCGAACAATCTGCCTTaGATTTCTTGTATTCTACAG +
Preference number: 4 (lower is better)
Translates to: EHEKHNFSLVGEKDAHQPSNNLP*ISCILQ
Trigger: CTGTAGAATACAAGAAATCCAAGGCAGATTGTTCGA...TGGCTGATGAGCATCCTTCTCTCCTACAAGACTGAAATTGTGTTTTTCATGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR TCA 90 bp AATGCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGTGCCTTCATTGCAATaGGAAGACACCTTTAAATAT +
Preference number: 4 (lower is better)
Translates to: NADLPIKCFCLTFGPRLIVPSLQ*EDTFKY
Trigger: ATATTTAAAGGTGTCTTCTCATTGCAATGAAGGCAC...AATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS GCA 90 bp CTTTGTGTGCCCCTGGGTGCCTGGCTTTGGAAAGCTTTGAGGCAGTaGCTGCTGAGGGGCTTGTTCACAGATTCTCATACCGTCACACTG +
Preference number: 5 (lower is better)
Translates to: LCVPLGAWLWKALRQ*LLRGLFTDSHTVTL
Trigger: CAGTGTGACGGTATGAGAATCTGTGAACAAGCCCCTCAGCAGGCACTGCCTCAAAGCTTTCCAAAGCCAGGCACCCAGGGGCACACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp GTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTACCTGGGTGCCTGGCTTaGGAAAGCTTTGAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: VFLPWRKWYRVRQSGRSVPGCLA*ESFEAV
Trigger: CACTGCCTCAAAGCTTTCCAAAGCCAGGCACCCAGG...TACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCCTGGGTGCCTGGCTTaGGAAAGCTTTGAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: HLKQEDKSLSFQEAERESPGCLA*ESFEAV
Trigger: CACTGCCTCAAAGCTTTCCAAAGCCAGGCACCCAGG...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS GCA 90 bp TTGGATTTTCGGGCACTGTTTGAAAGTCAACTTTTGAGAGAGGTGTaGCTGGGCTGCTGGCAGGTTTACCTCCAGCTTTGTGGAACTGAC +
Preference number: 5 (lower is better)
Translates to: LDFRALFESQLLREV*LGCWQVYLQLCGTD
Trigger: GTCAGTTCCACAAAGCTGGAGGTAAACCTGCCAGCAGCCCAGGCACACCTCTCTCAAAAGTTGACTTTCAAACAGTGCCCGAAAATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp AGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTCAGGTGTTTCCCAAATaGGGGAGGCCGTGGCATATT +
Preference number: 5 (lower is better)
Translates to: SFPSMEEVVSSETVRQICQVFPK*GRPWHI
Trigger: AATATGCCACGGCCTCCCCAATTTGGGAAACACCTG...ACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp GAGAGAAGGATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATTTGAAAGTCAACTTTaGAGAGAGGTGTGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: ERRMLISQSYGIEVSVSGFESQL*REVCLG
Trigger: GCCCAGGCACACCTCTCTCAAAAGTTGACTTTCAAA...TCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCATCCTTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGTGGCTTTGGAAAGCTTaGAGGCAGTGCCTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: HLKQEDKSLSFQEAERESWLWKA*RQCLLR
Trigger: CCTCAGCAGGCACTGCCTCAAAGCTTTCCAAAGCCA...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp ATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCTGGCTTTGGAAAGCTTaGAGGCAGTGCCTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: ISSKKISPSLFRRLRENRWLWKA*RQCLLR
Trigger: CCTCAGCAGGCACTGCCTCAAAGCTTTCCAAAGCCA...GCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS CCA 90 bp GCACTGTTTGAAAGTCAACTTTTGAGAGAGGTGTGCCTGGGCTGCTaGCAGGTTTACCTCCAGCTTTGTGGAACTGACAAAGTGAGGTAT +
Preference number: 5 (lower is better)
Translates to: ALFESQLLREVCLGC*QVYLQLCGTDKVRY
Trigger: ATACCTCACTTTGTCAGTTCCACAAAGCTGGAGGTAAACCTGCCAGCAGCCCAGGCACACCTCTCTCAAAAGTTGACTTTCAAACAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp GAGAGAAGGATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGAACTCCAACGGAAGTCTaGTGCTCACATTTTGCACAT +
Preference number: 5 (lower is better)
Translates to: ERRMLISQSYGIEVSVSGTPTEV*CSHFAH
Trigger: ATGTGCAAAATGTGAGCACAAGACTTCCGTTGGAGT...TCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCATCCTTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp ATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCTTGATGCCAGGAGTTGGAGCCAGGATATCTTaGGATTCCTTTGTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: ISPSLFRRLRENRLMPGVGARIS*DSFVAG
Trigger: GCCTGCAACAAAGGAATCCAAAGATATCCTGGCTCC...AACTCCTGGCATCAAGCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp GTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTAGTCTCCTCTACCTCCTaGCTATTAAGCTGGGCATTC +
Preference number: 5 (lower is better)
Translates to: VFLPWRKWYRVRQSGRSVVSSTS*LLSWAF
Trigger: GAATGCCCAGCTTAATAGCAAGGAGGTAGAGGAGAC...TACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp GTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTAACGGTCTCCATCAGATaGCTATCCCTTACCCCAAGT +
Preference number: 5 (lower is better)
Translates to: VFLPWRKWYRVRQSGRSVTVSIR*LSLTPS
Trigger: ACTTGGGGTAAGGGATAGCAATCTGATGGAGACCGT...TACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370832.1
CDS TCA 90 bp TCAGGCAGATCTGTACAAGGAGGAGTACGTTCCTCTTATTCCTTCTaGAGGGTCTCCTCTACCTCCTTGCTATTAAGCTGGGCATTCTCT +
Preference number: 5 (lower is better)
Translates to: SGRSVQGGVRSSYSF*RVSSTSLLLSWAFS
Trigger: AGAGAATGCCCAGCTTAATAGCAAGGAGGTAGAGGAGACCCTTCAGAAGGAATAAGAGGAACGTACTCCTCCTTGTACAGATCTGCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp GTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTAGCATCGTTCTGTGCATaGCCATGGAATATCTCTGCA +
Preference number: 5 (lower is better)
Translates to: VFLPWRKWYRVRQSGRSVASFCA*PWNISA
Trigger: TGCAGAGATATTCCATGGCAATGCACAGAACGATGC...TACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp GAGAGAAGGATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATGTCTCTTAAATAGTTaGTGGAAGAAGTCGACACCC +
Preference number: 5 (lower is better)
Translates to: ERRMLISQSYGIEVSVSGCLLNS*WKKSTP
Trigger: GGGTGTCGACTTCTTCCACAAACTATTTAAGAGACA...TCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCATCCTTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511190.5
CDS-3UTR CAA 90 bp AGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTTTTCTCAGTGAGAGCTaGGAGAAGACCAATGTCATC +
Preference number: 5 (lower is better)
Translates to: SFPSMEEVVSSETVRQICFLSES*EKTNVI
Trigger: GATGACATTGGTCTTCTCCAAGCTCTCACTGAGAAA...ACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp GTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTAACTCCAACGGAAGTCTaGTGCTCACATTTTGCACAT +
Preference number: 5 (lower is better)
Translates to: VFLPWRKWYRVRQSGRSVTPTEV*CSHFAH
Trigger: ATGTGCAAAATGTGAGCACAAGACTTCCGTTGGAGT...TACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp CCAAGATTTTGCATTTCAAATGACTACCCCCATGCTCCTGGTGCTGCTAGTTTAGGAGCCAGGATATCTTaGGATTCCTTTGTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: PRFCISNDYPHAPGAASLGARIS*DSFVAG
Trigger: GCCTGCAACAAAGGAATCCAAAGATATCCTGGCTCC...TAAACTAGCAGCACCAGGAGCATGGGGGTAGTCATTTGAAATGCAAAATCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370832.1
CDS-3UTR CAA 90 bp ATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCTTGATGCCAGGAGTTTGCAGTGAGTTATTATaGAAGGACTGCACTCTAGCC +
Preference number: 5 (lower is better)
Translates to: ISPSLFRRLRENRLMPGVCSELL*KDCTLA
Trigger: GGCTAGAGTGCAGTCCTTCAATAATAACTCACTGCA...AACTCCTGGCATCAAGCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp AGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTTATCTTTGGATTCCTTaGTTGCAGGCCATGATACAC +
Preference number: 5 (lower is better)
Translates to: SFPSMEEVVSSETVRQICYLWIP*LQAMIH
Trigger: GTGTATCATGGCCTGCAACAAAGGAATCCAAAGATA...ACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp GTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTATTTCTTGGATTCTTATaGGAACCCAGTGCAAGTAGG +
Preference number: 5 (lower is better)
Translates to: VFLPWRKWYRVRQSGRSVFLGFL*EPSASR
Trigger: CCTACTTGCACTGGGTTCCAATAAGAATCCAAGAAA...TACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp ATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATTAGAATGCTTTCTTGGATTCTTATaGGAACCCAGTGCAAGTAGG +
Preference number: 5 (lower is better)
Translates to: MLISQSYGIEVSVSGLECFLGFL*EPSASR
Trigger: CCTACTTGCACTGGGTTCCAATAAGAATCCAAGAAA...GCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCAGTCTCCTCTACCTCCTaGCTATTAAGCTGGGCATTC +
Preference number: 5 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIAVSSTS*LLSWAF
Trigger: GAATGCCCAGCTTAATAGCAAGGAGGTAGAGGAGAC...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS TCA 90 bp GCATCTGGGCCTCCTGGATACCTAACACCCGCATATCATCGTAAGTaGACCAGATCTGTTTCTCAAAGTCATAGGCATCACAGATATAAT +
Preference number: 5 (lower is better)
Translates to: ASGPPGYLTPAYHRK*TRSVSQSHRHHRYN
Trigger: ATTATATCTGTGATGCCTATGACTTTGAGAAACAGATCTGGTTCACTTACGATGATATGCGGGTGTTAGGTATCCAGGAGGCCCAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp GTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTACAAGAATATCTTCAATaGTTCAGCATCTGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: VFLPWRKWYRVRQSGRSVQEYLQ*FSICGG
Trigger: TCCTCCACAGATGCTGAACAATTGAAGATATTCTTG...TACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp ATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATTAGAATGCCAAGAATATCTTCAATaGTTCAGCATCTGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: MLISQSYGIEVSVSGLECQEYLQ*FSICGG
Trigger: TCCTCCACAGATGCTGAACAATTGAAGATATTCTTG...GCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCATTTGAAAGTCAACTTTaGAGAGAGGTGTGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIAFESQL*REVCLG
Trigger: GCCCAGGCACACCTCTCTCAAAAGTTGACTTTCAAA...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp ACAGTAGTGGTTCTCAAACTGTATCAAGCATCACGGTCTCCATCAGATTGCTATTGGCTGAACCTCGTTTaGATGAACTCTGTCCAAGAA +
Preference number: 5 (lower is better)
Translates to: TVVVLKLYQASRSPSDCYWLNLV*MNSVQE
Trigger: TTCTTGGACAGAGTTCATCAAAACGAGGTTCAGCCA...ATAGCAATCTGATGGAGACCGTGATGCTTGATACAGTTTGAGAACCACTACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370832.1
CDS-3UTR CAA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCTCGAACAATCTGCCTaGGATTTCTTGTATTCTACA +
Preference number: 5 (lower is better)
Translates to: HLKQEDKSLSFQEAERESLEQSA*DFLYST
Trigger: TGTAGAATACAAGAAATCCAAGGCAGATTGTTCGAG...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCATTTCTCAGTGAGAGCTaGGAGAAGACCAATGTCATC +
Preference number: 5 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIAFLSES*EKTNVI
Trigger: GATGACATTGGTCTTCTCCAAGCTCTCACTGAGAAA...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp GAACATGAAAAACACAATTTCAGTCTTGTAGGAGAGAAGGATGCTCATCAGCCAGCATCGTTCTGTGCATaGCCATGGAATATCTCTGCA +
Preference number: 5 (lower is better)
Translates to: EHEKHNFSLVGEKDAHQPASFCA*PWNISA
Trigger: TGCAGAGATATTCCATGGCAATGCACAGAACGATGC...TGGCTGATGAGCATCCTTCTCTCCTACAAGACTGAAATTGTGTTTTTCATGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp AGTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTGGCTTCCAAATTGTGTaGAGTTTTTCCATGTTATCT +
Preference number: 5 (lower is better)
Translates to: SFPSMEEVVSSETVRQICGFQIV*SFSMLS
Trigger: AGATAACATGGAAAAACTCAACACAATTTGGAAGCC...ACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCATTTTCCAAGGTACTTTaGCTGCTGTCTTCTGCTTGC +
Preference number: 5 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIAFSKVL*LLSSAC
Trigger: GCAAGCAGAAGACAGCAGCAAAAGTACCTTGGAAAA...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp GTTTTCCTTCCATGGAGGAAGTGGTATCGAGTGAGACAGTCAGGCAGATCTGTACTGTTCAGACACTTTTaGGAATCTTTCTGGAATTCT +
Preference number: 5 (lower is better)
Translates to: VFLPWRKWYRVRQSGRSVLFRHF*ESFWNS
Trigger: AGAATTCCAGAAAGATTCCAAAAAGTGTCTGAACAG...TACAGATCTGCCTGACTGTCTCACTCGATACCACTTCCTCCATGGAAGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp ATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCTTGATGCCAGGAGTTCTGTTCAGACACTTTTaGGAATCTTTCTGGAATTCT +
Preference number: 5 (lower is better)
Translates to: ISPSLFRRLRENRLMPGVLFRHF*ESFWNS
Trigger: AGAATTCCAGAAAGATTCCAAAAAGTGTCTGAACAG...AACTCCTGGCATCAAGCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp ATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCTTGATGCCAGGAGTTATTAAGTGTTTCTGTTaGACCTTTGGTCCTAGACTA +
Preference number: 5 (lower is better)
Translates to: ISPSLFRRLRENRLMPGVIKCFC*TFGPRL
Trigger: TAGTCTAGGACCAAAGGTCAAACAGAAACACTTAAT...AACTCCTGGCATCAAGCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp ATGCTCATCAGCCAGAGCTATGGGATTGAGGTGTCTGTGTCAGGATTAGAATGCATTAAGTGTTTCTGTTaGACCTTTGGTCCTAGACTA +
Preference number: 5 (lower is better)
Translates to: MLISQSYGIEVSVSGLECIKCFC*TFGPRL
Trigger: TAGTCTAGGACCAAAGGTCAAACAGAAACACTTAAT...GCATTCTAATCCTGACACAGACACCTCAATCCCATAGCTCTGGCTGATGAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp ACAGTAGTGGTTCTCAAACTGTATCAAGCATCACGGTCTCCATCAGATTGCTATTGCAGTGAGTTATTATaGAAGGACTGCACTCTAGCC +
Preference number: 5 (lower is better)
Translates to: TVVVLKLYQASRSPSDCYCSELL*KDCTLA
Trigger: GGCTAGAGTGCAGTCCTTCAATAATAACTCACTGCA...ATAGCAATCTGATGGAGACCGTGATGCTTGATACAGTTTGAGAACCACTACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370832.1
CDS-3UTR CAA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCATTAGATATCCCAGTCTaGCAGTTCCCTATTTGGACA +
Preference number: 5 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIALDIPV*QFPIWT
Trigger: TGTCCAAATAGGGAACTGCAAGACTGGGATATCTAA...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp GCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGCACAGCAAACGATGGGATaGAAAGTAGAGACTGTAACA +
Preference number: 5 (lower is better)
Translates to: ADLPIKCFCLTFGPRLIAQQTMG*KVETVT
Trigger: TGTTACAGTCTCTACTTTCAATCCCATCGTTTGCTG...TGCAATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp CATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCATATTTCTTTCGTTTaGGATTTTCGGGCACTGTTT +
Preference number: 5 (lower is better)
Translates to: HLKQEDKSLSFQEAERESHISFV*DFRALF
Trigger: AAACAGTGCCCGAAAATCCAAAACGAAAGAAATATG...CGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp ATCTCAAGCAAGAAGATAAGTCCCTCTCTTTTCAGGAGGCTGAGAGAGAATCGCCATATTTCTTTCGTTTaGGATTTTCGGGCACTGTTT +
Preference number: 5 (lower is better)
Translates to: ISSKKISPSLFRRLRENRHISFV*DFRALF
Trigger: AAACAGTGCCCGAAAATCCAAAACGAAAGAAATATG...GCGATTCTCTCTCAGCCTCCTGAAAAGAGAGGGACTTATCTTCTTGCTTGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp GAACATGAAAAACACAATTTCAGTCTTGTAGGAGAGAAGGATGCTCATCAGCCATTAGATATCCCAGTCTaGCAGTTCCCTATTTGGACA +
Preference number: 5 (lower is better)
Translates to: EHEKHNFSLVGEKDAHQPLDIPV*QFPIWT
Trigger: TGTCCAAATAGGGAACTGCAAGACTGGGATATCTAA...TGGCTGATGAGCATCCTTCTCTCCTACAAGACTGAAATTGTGTTTTTCATGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp GAACATGAAAAACACAATTTCAGTCTTGTAGGAGAGAAGGATGCTCATCAGCCATATCTTTGGATTCCTTaGTTGCAGGCCATGATACAC +
Preference number: 5 (lower is better)
Translates to: EHEKHNFSLVGEKDAHQPYLWIP*LQAMIH
Trigger: GTGTATCATGGCCTGCAACAAAGGAATCCAAAGATA...TGGCTGATGAGCATCCTTCTCTCCTACAAGACTGAAATTGTGTTTTTCATGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS TCA 90 bp CACTATACCCTTGTTGTAACAGAAATACCAAAACCATTTTCTCAGTaGGAGCTTGGAGAAGACCAATGTCATCTAGGTAAGGATTTCCAG +
Preference number: 5 (lower is better)
Translates to: HYTLVVTEIPKPFSQ*ELGEDQCHLGKDFQ
Trigger: CTGGAAATCCTTACCTAGATGACATTGGTCTTCTCCAAGCTCTCACTGAGAAAATGGTTTTGGTATTTCTGTTACAACAAGGGTATAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp AATGCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTCAGCAAACGATGGGATaGAAAGTAGAGACTGTAACA +
Preference number: 5 (lower is better)
Translates to: NADLPIKCFCLTFGPRLIQQTMG*KVETVT
Trigger: TGTTACAGTCTCTACTTTCAATCCCATCGTTTGCTG...AATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp AATGCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTAAGTTCCAATCTGTTTaGCAAGTTCAGCTCCACAAG +
Preference number: 5 (lower is better)
Translates to: NADLPIKCFCLTFGPRLIKFQSV*QVQLHK
Trigger: CTTGTGGAGCTGAACTTGCAAAACAGATTGGAACTT...AATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511190.5
CDS TCA 90 bp GGAGAAGACCAATGTCATCTAGGTAAGGATTTCCAGTGGCGTTCATaGTGCATGAAGATTCACATTCCAATTTCTTATTCTCTTCTAACT +
Preference number: 5 (lower is better)
Translates to: GEDQCHLGKDFQWRS*CMKIHIPISYSLLT
Trigger: AGTTAGAAGAGAATAAGAAATTGGAATGTGAATCTTCATGCATCATGAACGCCACTGGAAATCCTTACCTAGATGACATTGGTCTTCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp AATGCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTCTCGAACAATCTGCCTaGGATTTCTTGTATTCTACA +
Preference number: 5 (lower is better)
Translates to: NADLPIKCFCLTFGPRLILEQSA*DFLYST
Trigger: TGTAGAATACAAGAAATCCAAGGCAGATTGTTCGAG...AATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS TCA 90 bp TATCTTCCAGATACGTCATTAAGTGAGCTAACGGTTCTTTTTCAATaGATGCTCGATCTCCTGAGTATACAGATTCTAGCTCATTTGGTT +
Preference number: 5 (lower is better)
Translates to: YLPDTSLSELTVLFQ*MLDLLSIQILAHLV
Trigger: AACCAAATGAGCTAGAATCTGTATACTCAGGAGATCGAGCATTCATTGAAAAAGAACCGTTAGCTCACTTAATGACGTATCTGGAAGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS-3UTR CAA 90 bp AATGCAGATCTCCCCATTAAGTGTTTCTGTTTGACCTTTGGTCCTAGACTAATTGGCTTCCAAATTGTGTaGAGTTTTTCCATGTTATCT +
Preference number: 5 (lower is better)
Translates to: NADLPIKCFCLTFGPRLIGFQIV*SFSMLS
Trigger: AGATAACATGGAAAAACTCAACACAATTTGGAAGCC...AATTAGTCTAGGACCAAAGGTCAAACAGAAACACTTAATGGGGAGATCTGCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS GCA 72 bp CCCCTGGGTGCCTGGCTTTGGAAAGCTTTGAGGCAGTaGCTGCTGAGGGGCTTGTTCACAGATTCTCATACC +
Preference number: 6 (lower is better)
Translates to: PLGAWLWKALRQ*LLRGLFTDSHT
Trigger: GGTATGAGAATCTGTGAACAAGCCCCTCAGCAGGCACTGCCTCAAAGCTTTCCAAAGCCAGGCACCCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS CCA 72 bp AAGATGTACCCAGTGCAACGCCTATCCTCCTGCATCTaGGCCTCCTGGATACCTAACACCCGCATATCATCG +
Preference number: 6 (lower is better)
Translates to: KMYPVQRLSSCI*ASWIPNTRISS
Trigger: CGATGATATGCGGGTGTTAGGTATCCAGGAGGCCCAGATGCAGGAGGATAGGCGTTGCACTGGGTACATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS CAA 90 bp GGTGCCTGGCTTTGGAAAGCTTTGAGGCAGTGCCTGCTGAGGGGCTaGTTCACAGATTCTCATACCGTCACACTGCTGAGTCTGTTCAGA +
Preference number: 6 (lower is better)
Translates to: GAWLWKALRQCLLRG*FTDSHTVTLLSLFR
Trigger: TCTGAACAGACTCAGCAGTGTGACGGTATGAGAATCTGTGAACAAGCCCCTCAGCAGGCACTGCCTCAAAGCTTTCCAAAGCCAGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS GCA 72 bp CGGGCACTGTTTGAAAGTCAACTTTTGAGAGAGGTGTaGCTGGGCTGCTGGCAGGTTTACCTCCAGCTTTGT +
Preference number: 6 (lower is better)
Translates to: RALFESQLLREV*LGCWQVYLQLC
Trigger: ACAAAGCTGGAGGTAAACCTGCCAGCAGCCCAGGCACACCTCTCTCAAAAGTTGACTTTCAAACAGTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS CAA 72 bp CTTTGGAAAGCTTTGAGGCAGTGCCTGCTGAGGGGCTaGTTCACAGATTCTCATACCGTCACACTGCTGAGT +
Preference number: 6 (lower is better)
Translates to: LWKALRQCLLRG*FTDSHTVTLLS
Trigger: ACTCAGCAGTGTGACGGTATGAGAATCTGTGAACAAGCCCCTCAGCAGGCACTGCCTCAAAGCTTTCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS CCA 72 bp GAAAGTCAACTTTTGAGAGAGGTGTGCCTGGGCTGCTaGCAGGTTTACCTCCAGCTTTGTGGAACTGACAAA +
Preference number: 6 (lower is better)
Translates to: ESQLLREVCLGC*QVYLQLCGTDK
Trigger: TTTGTCAGTTCCACAAAGCTGGAGGTAAACCTGCCAGCAGCCCAGGCACACCTCTCTCAAAAGTTGACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS TCA 72 bp GGGCTGCTGGCAGGTTTACCTCCAGCTTTGTGGAACTaGCAAAGTGAGGTATCTTCCAGATACGTCATTAAG +
Preference number: 6 (lower is better)
Translates to: GLLAGLPPALWN*QSEVSSRYVIK
Trigger: CTTAATGACGTATCTGGAAGATACCTCACTTTGTCAGTTCCACAAAGCTGGAGGTAAACCTGCCAGCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS TCA 72 bp ATCATTGTTGGGTCAAGGTCATCCTGGGAACATCCATaGCCACAGGTCCAATTCTCCACAAGGATCCTGAGA +
Preference number: 6 (lower is better)
Translates to: IIVGSRSSWEHP*PQVQFSTRILR
Trigger: TCTCAGGATCCTTGTGGAGAATTGGACCTGTGGTCATGGATGTTCCCAGGATGACCTTGACCCAACAATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417459.2
CDS CAA 90 bp GACACTCCCACCCTTACCAGGTCTCACAGGTGGCTGAACCTCGTTTaGATGAACTCTGTCCAAGAATATCTTCAATTGTTCAGCATCTGT +
Preference number: 6 (lower is better)
Translates to: DTPTLTRSHRWLNLV*MNSVQEYLQLFSIC
Trigger: ACAGATGCTGAACAATTGAAGATATTCTTGGACAGAGTTCATCAAAACGAGGTTCAGCCACCTGTGAGACCTGGTAAGGGTGGGAGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS TCA 72 bp GGGGCTTGTTCACAGATTCTCATACCGTCACACTGCTaGGTCTGTTCAGACACTTTTTGGAATCTTTCTGGA +
Preference number: 6 (lower is better)
Translates to: GACSQILIPSHC*VCSDTFWNLSG
Trigger: TCCAGAAAGATTCCAAAAAGTGTCTGAACAGACTCAGCAGTGTGACGGTATGAGAATCTGTGAACAAGCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS TCA 72 bp CCTCCTGGATACCTAACACCCGCATATCATCGTAAGTaGACCAGATCTGTTTCTCAAAGTCATAGGCATCAC +
Preference number: 6 (lower is better)
Translates to: PPGYLTPAYHRK*TRSVSQSHRHH
Trigger: GTGATGCCTATGACTTTGAGAAACAGATCTGGTTCACTTACGATGATATGCGGGTGTTAGGTATCCAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS CAA 90 bp TCCACTGCTTCAATGAATGCTTCTTTTGACTTAGATATCCCAGTCTaGCAGTTCCCTATTTGGACAAAACCACGTAGGAATAGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: STASMNASFDLDIPV*QFPIWTKPRRNRAA
Trigger: GGCTGCCCTATTCCTACGTGGTTTTGTCCAAATAGGGAACTGCAAGACTGGGATATCTAAGTCAAAAGAAGCATTCATTGAAGCAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS CAA 72 bp ACCCTTACCAGGTCTCACAGGTGGCTGAACCTCGTTTaGATGAACTCTGTCCAAGAATATCTTCAATTGTTC +
Preference number: 6 (lower is better)
Translates to: TLTRSHRWLNLV*MNSVQEYLQLF
Trigger: GAACAATTGAAGATATTCTTGGACAGAGTTCATCAAAACGAGGTTCAGCCACCTGTGAGACCTGGTAAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS CAA 72 bp GGTAGCCTACTGAATGAGTGCACTCCAACGGAAGTCTaGTGCTCACATTTTGCACATTTATACTCAAGCTCT +
Preference number: 6 (lower is better)
Translates to: GSLLNECTPTEV*CSHFAHLYSSS
Trigger: AGAGCTTGAGTATAAATGTGCAAAATGTGAGCACAAGACTTCCGTTGGAGTGCACTCATTCAGTAGGCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS CAA 72 bp TCCTTATCTGATCCAATGTGTGGAGCCAGGATATCTTaGGATTCCTTTGTTGCAGGCCATGATACACTGATG +
Preference number: 6 (lower is better)
Translates to: SLSDPMCGARIS*DSFVAGHDTLM
Trigger: CATCAGTGTATCATGGCCTGCAACAAAGGAATCCAAAGATATCCTGGCTCCACACATTGGATCAGATAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS CAA 90 bp TGTTCAGACTCCTTATCTGATCCAATGTGTGGAGCCAGGATATCTTaGGATTCCTTTGTTGCAGGCCATGATACACTGATGTTTCCAGAA +
Preference number: 6 (lower is better)
Translates to: CSDSLSDPMCGARIS*DSFVAGHDTLMFPE
Trigger: TTCTGGAAACATCAGTGTATCATGGCCTGCAACAAAGGAATCCAAAGATATCCTGGCTCCACACATTGGATCAGATAAGGAGTCTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS TCA 72 bp GTAAGTGTCAATTTTGATGTAAGCAAAGGCATCCTCTaGAGGACACCTGTCCCACTTCCTTTTGCTATCTCA +
Preference number: 6 (lower is better)
Translates to: VSVNFDVSKGIL*RTPVPLPFAIS
Trigger: TGAGATAGCAAAAGGAAGTGGGACAGGTGTCCTTCAGAGGATGCCTTTGCTTACATCAAAATTGACACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS CCA 72 bp TTTGACTTAGATATCCCAGTCTTGCAGTTCCCTATTTaGACAAAACCACGTAGGAATAGGGCAGCCATGTTT +
Preference number: 6 (lower is better)
Translates to: FDLDIPVLQFPI*TKPRRNRAAMF
Trigger: AAACATGGCTGCCCTATTCCTACGTGGTTTTGTCCAAATAGGGAACTGCAAGACTGGGATATCTAAGTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS CAA 72 bp CTCCGATTATTGATAATCTTGAAGTTCCAATCTGTTTaGCAAGTTCAGCTCCACAAGGATCCTGAGAGGCAA +
Preference number: 6 (lower is better)
Translates to: LRLLIILKFQSV*QVQLHKDPERQ
Trigger: TTGCCTCTCAGGATCCTTGTGGAGCTGAACTTGCAAAACAGATTGGAACTTCAAGATTATCAATAATCGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511190.5
CDS TCA 72 bp CTTGTTGTAACAGAAATACCAAAACCATTTTCTCAGTaGGAGCTTGGAGAAGACCAATGTCATCTAGGTAAG +
Preference number: 6 (lower is better)
Translates to: LVVTEIPKPFSQ*ELGEDQCHLGK
Trigger: CTTACCTAGATGACATTGGTCTTCTCCAAGCTCTCACTGAGAAAATGGTTTTGGTATTTCTGTTACAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS TCA 72 bp GATACGTCATTAAGTGAGCTAACGGTTCTTTTTCAATaGATGCTCGATCTCCTGAGTATACAGATTCTAGCT +
Preference number: 6 (lower is better)
Translates to: DTSLSELTVLFQ*MLDLLSIQILA
Trigger: AGCTAGAATCTGTATACTCAGGAGATCGAGCATTCATTGAAAAAGAACCGTTAGCTCACTTAATGACGTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS CAA 72 bp TCAATGAATGCTTCTTTTGACTTAGATATCCCAGTCTaGCAGTTCCCTATTTGGACAAAACCACGTAGGAAT +
Preference number: 6 (lower is better)
Translates to: SMNASFDLDIPV*QFPIWTKPRRN
Trigger: ATTCCTACGTGGTTTTGTCCAAATAGGGAACTGCAAGACTGGGATATCTAAGTCAAAAGAAGCATTCATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5
CDS TCA 72 bp CAATGTCATCTAGGTAAGGATTTCCAGTGGCGTTCATaGTGCATGAAGATTCACATTCCAATTTCTTATTCT +
Preference number: 6 (lower is better)
Translates to: QCHLGKDFQWRS*CMKIHIPISYS
Trigger: AGAATAAGAAATTGGAATGTGAATCTTCATGCATCATGAACGCCACTGGAAATCCTTACCTAGATGACATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370832.1
ENST00000511190.5