RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP25 (Homo sapiens)

Ensembl gene IDs: ENSG00000155313

Ensembl transcript IDs: ENST00000285679.10, ENST00000285681.6, ENST00000351097.9, ENST00000400183.6, ENST00000400183.7, ENST00000449491.1, ENST00000453553.1, ENST00000464435.1, ENST00000478932.1, ENST00000547201.5, ENST00000549362.1

Found 275 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCATCCAGGATCTTTTGTaGGAGGCACTAATAAAGAAC +
Preference number: 2 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPIQDLL*EALIKN
Trigger: GTTCTTTATTAGTGCCTCTCACAAAAGATCCTGGAT...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285681.6
ENST00000400183.6
3UTR-3UTR TCA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCACTTTGGGATTCTCTTaGAATAATCACCTTGCTGTA +
Preference number: 2 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPTLGFS*NNHLAV
Trigger: TACAGCAAGGTGATTATTTCAAGAGAATCCCAAAGT...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285681.6
ENST00000400183.6
3UTR GCA 72 bp ATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTaGAGTCTGACTAAAGTCTGTATAGTCATTTTGTCT +
Preference number: 3 (lower is better)
Translates to: MSERHAIFSFIV*SLTKVCIVILS
Trigger: AGACAAAATGACTATACAGACTTTAGTCAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.6
3UTR TCA 72 bp AATATTTCATCTTACTCCTCCATCCAGGATCTTTTGTaGGAGGCACTAATAAAGAACACTAGTTTTGGCGAC +
Preference number: 3 (lower is better)
Translates to: NISSYSSIQDLL*EALIKNTSFGD
Trigger: GTCGCCAAAACTAGTGTTCTTTATTAGTGCCTCTCACAAAAGATCCTGGATGGAGGAGTAAGATGAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285681.6
ENST00000400183.6
CDS-3UTR TCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCGCGAAACGCCGACTGTaGGGGCCACGGCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVAKRRL*GPRRPP
Trigger: AGGCGGCCGCCGTGGCCCTCACAGTCGGCGTTTCGC...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR TCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGGCGAAACGCCGACTGTaGGGGCCACGGCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARAKRRL*GPRRPP
Trigger: AGGCGGCCGCCGTGGCCCTCACAGTCGGCGTTTCGC...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGGTTCGCACGTTCCTTTaGTGCCGGTCCGCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLVRTFL*CRSAGC
Trigger: GCAGCCCGCGGACCGGCAGCAAAGGAACGTGCGAAC...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR TCA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCGCGAAACGCCGACTGTaGGGGCCACGGCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPAKRRL*GPRRPP
Trigger: AGGCGGCCGCCGTGGCCCTCACAGTCGGCGTTTCGC...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCGTCTGCTGGTGCTTCTaGGCCGCGCTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVVCWCF*AALCCS
Trigger: GCTGCAGCAGAGCGCGGCGCAGAAGCACCAGCAGAC...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCTGCAGCACGTTCTaGTCCACGGTCATGGCCCCC +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVCCSTF*STVMAP
Trigger: GGGGGCCATGACCGTGGAGCAGAACGTGCTGCAGCA...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTGCGCCGCGCTCTGCTaGAGCACGTTCTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARCAALC*STFCST
Trigger: CGTGGAGCAGAACGTGCTGCAGCAGAGCGCGGCGCA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTTCTGCGCCGCGCTCTaGTGCAGCACGTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVFCAAL*CSTFCS
Trigger: GGAGCAGAACGTGCTGCAGCAGAGCGCGGCGCAGAA...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTGCTGCAGCACGTTCTaGTCCACGGTCATGGCCCCC +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARCCSTF*STVMAP
Trigger: GGGGGCCATGACCGTGGAGCAGAACGTGCTGCAGCA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCTGCGCCGCGCTCTGCTaGAGCACGTTCTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPCAALC*STFCST
Trigger: CGTGGAGCAGAACGTGCTGCAGCAGAGCGCGGCGCA...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR GCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTTCTGCGCCGCGCTCTaGTGCAGCACGTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARFCAAL*CSTFCS
Trigger: GGAGCAGAACGTGCTGCAGCAGAGCGCGGCGCAGAA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGTTCAAAAACGTCTGCTaGTGCTTCTGCGCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLFKNVC*CFCAAL
Trigger: GAGCGCGGCGCAGAAGCACCAGCAGACGTTTTTGAA...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR TCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGGTTGTCTCCTCCTGCTaGGGGGTCTTAGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLVVSSC*GVLAFF
Trigger: GAAGAATGCTAAGACCCCTCAGCAGGAGGAGACAAC...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR TCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGCCTGAATGCCCTGTTTaGTTCGGCCAAACTCAAGGC +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLPECPV*FGQTQG
Trigger: GCCTTGAGTTTGGCCGAATCAAACAGGGCATTCAGG...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGCGTTATGTGCCTTGGTaGCGGATGCATGGGCAAATC +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLRYVPW*RMHGQI
Trigger: GATTTGCCCATGCATCCGGCACCAAGGCACATAACG...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGTCTTCCTCCGTTATGTaGCTTGGTGCCGGATGCATG +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLSSSVM*LGAGCM
Trigger: CATGCATCCGGCACCAAGGCACATAACGGAGGAAGA...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGTGCCTTAAAGAACCCTaGTTCAGGGCCACACCTGTC +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLCLKEP*FRATPV
Trigger: GACAGGTGTGGCCCTGAAGCAGGGTTCTTTAAGGCA...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCCTTGGTGCCGGATaGATGGGCAAATCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVCLGAG*MGKSGG
Trigger: ACCTCCAGATTTGCCCATGCATCCGGCACCAAGGCA...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGCCAAGGGGAATCGTTTaGGACCGGAACCATAGCTTA +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLPRGIV*DRNHSL
Trigger: TAAGCTATGGTTCCGGTCCCAAACGATTCCCCTTGG...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGGGTGGGGTGTCTTCTTaGGCCAACTTAACCAACCTT +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLGGVSS*ANLTNL
Trigger: AAGGTTGGTTAAGTTGGCCCAAGAAGACACCCCACC...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR TCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGCTTGGCTTCCCACACTaGTGTATCTATCATTGCCAG +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLLGFPH*CIYHCQ
Trigger: CTGGCAATGATAGATACATCAGTGTGGGAAGCCAAG...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTGCCTTGGTGCCGGATaGATGGGCAAATCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARCLGAG*MGKSGG
Trigger: ACCTCCAGATTTGCCCATGCATCCGGCACCAAGGCA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCCGTTATGTGCCTTGGTaGCGGATGCATGGGCAAATC +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVRYVPW*RMHGQI
Trigger: GATTTGCCCATGCATCCGGCACCAAGGCACATAACG...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTTGGTGCCGGATGCATaGGCAAATCTGGAGGTATCC +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVLVPDA*ANLEVS
Trigger: GGATACCTCCAGATTTGCCCATGCATCCGGCACCAA...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGCTCCGTTATGTGCCTTaGTGCCGGATGCATGGGCAA +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARLRYVP*CRMHGQ
Trigger: TTGCCCATGCATCCGGCACCAAGGCACATAACGGAG...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGATAATCGGTTTCTGGTaGGGTGTCTTCTTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLIIGFW*GVFLGQ
Trigger: TTGGCCCAAGAAGACACCCCACCAGAAACCGATTAT...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR TCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGGTTGTCTCCTCCTGCTaGGGGGTCTTAGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARVVSSC*GVLAFF
Trigger: GAAGAATGCTAAGACCCCTCAGCAGGAGGAGACAAC...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR TCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGTTTCGGGGTAAATCTTaGGCATTTGATGGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLFRGKS*AFDGGL
Trigger: CAAGCCTCCATCAAATGCTCAAGATTTACCCCGAAA...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGCTATCCTTCAAGGCTTaGTGTAGTATCTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLLSFKA*CSIWVS
Trigger: TGACACCCAGATACTACAGCAAGCCTTGAAGGATAG...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGGCTTCTAGGCACTCATaGAGATCTTTGAACCCATTG +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLASRHS*RSLNPL
Trigger: CAATGGGTTCAAAGATCTGCATGAGTGCCTAGAAGC...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTCTTCCTCCGTTATGTaGCTTGGTGCCGGATGCATG +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARSSSVM*LGAGCM
Trigger: CATGCATCCGGCACCAAGGCACATAACGGAGGAAGA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTTCTGGGTCTCCTGCTaGTTGTGCTGTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVFWVSC*LCCCHR
Trigger: TCTGTGACAACAGCACAAGCAGCAGGAGACCCAGAA...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGCCCATTGACCTGAAGTaGGTACTGACCAAACATTTC +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLPIDLK*VLTKHF
Trigger: GAAATGTTTGGTCAGTACCCACTTCAGGTCAATGGG...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGCTGATCTCGATGAAATaGCAGCAACTGATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLLISMK*QQLMKV
Trigger: CACCTTCATCAGTTGCTGCCATTTCATCGAGATCAG...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCATGCATGGGCAAATCTaGAGGTATCCGGGACTGAGT +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVMHGQI*RYPGLS
Trigger: ACTCAGTCCCGGATACCTCCAGATTTGCCCATGCAT...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTTGGTGCCGGATGCATaGGCAAATCTGGAGGTATCC +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARLVPDA*ANLEVS
Trigger: GGATACCTCCAGATTTGCCCATGCATCCGGCACCAA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCCTCCGTTATGTGCCTTaGTGCCGGATGCATGGGCAA +
Preference number: 4 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPLRYVP*CRMHGQ
Trigger: TTGCCCATGCATCCGGCACCAAGGCACATAACGGAG...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR CCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCACGATAATCGGTTTCTaGTGGGGTGTCTTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVTIIGF*WGVFLG
Trigger: GCCCAAGAAGACACCCCACCAGAAACCGATTATCGT...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR TCA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCGTTGTCTCCTCCTGCTaGGGGGTCTTAGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPVVSSC*GVLAFF
Trigger: GAAGAATGCTAAGACCCCTCAGCAGGAGGAGACAAC...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR TCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCCTTGGCTTCCCACACTaGTGTATCTATCATTGCCAG +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVLGFPH*CIYHCQ
Trigger: CTGGCAATGATAGATACATCAGTGTGGGAAGCCAAG...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR TCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTTATTCCAGTCTCCCTaGATGCCCTGTTTGATTCGG +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVLFQSP*MPCLIR
Trigger: CCGAATCAAACAGGGCATTCAGGGAGACTGGAATAA...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR TCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGAATTCCAATGCATACTaGAGAACATCTACCAAGGGG +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLNSNAY*RTSTKG
Trigger: CCCCTTGGTAGATGTTCTTCAGTATGCATTGGAATT...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR TCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGTGTCACAGAAGTCTCTaGCTCTCTCAATTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLCHRSL*LSQFLR
Trigger: TCTCAGAAATTGAGAGAGTCAGAGACTTCTGTGACA...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR TCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGTCTGATAAGCACAGATaGGGAACAGCAAGGAATCTA +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLSDKHR*GTARNL
Trigger: TAGATTCCTTGCTGTTCCTCATCTGTGCTTATCAGA...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCCCACAGCCAGGAATCTaGCATAGAACAACTCTACCA +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVPQPGI*HRTTLP
Trigger: TGGTAGAGTTGTTCTATGGCAGATTCCTGGCTGTGG...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGCTGATGAAGGTGATGTaGTTGGCAGTTCTGAAGATA +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLLMKVM*LAVLKI
Trigger: TATCTTCAGAACTGCCAAGCACATCACCTTCATCAG...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGTGTTCAGGGAAAGTGTaGAGTTTATCTTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLCSGKV*SLSSIS
Trigger: GCTGATGGAAGATAAACTGCACACTTTCCCTGAACA...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGATGCATGGGCAAATCTaGAGGTATCCGGGACTGAGT +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARMHGQI*RYPGLS
Trigger: ACTCAGTCCCGGATACCTCCAGATTTGCCCATGCAT...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTCCTGCAAAGCTTTCTaGGCAAGTTGTGCATCCCAT +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVSCKAF*ASCASH
Trigger: ATGGGATGCACAACTTGCCCAGAAAGCTTTGCAGGA...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGACGATAATCGGTTTCTaGTGGGGTGTCTTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARTIIGF*WGVFLG
Trigger: GCCCAAGAAGACACCCCACCAGAAACCGATTATCGT...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGTCTGTCAGCTTTTCTTaGAGGTGTGGTTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLSVSFS*RCGSIS
Trigger: AGAAATGGAACCACACCTCCAAGAAAAGCTGACAGA...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR TCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGGTAATTTCTCTCAGTTaGTTCAAAAACGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLVISLS*FKNVCW
Trigger: CCAGCAGACGTTTTTGAATCAACTGAGAGAAATTAC...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR TCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTTATTCCAGTCTCCCTaGATGCCCTGTTTGATTCGG +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARLFQSP*MPCLIR
Trigger: CCGAATCAAACAGGGCATTCAGGGAGACTGGAATAA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR TCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGGCAAACAGGTTTACTTaGGGCAAATTCCAATGCATA +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLANRFT*GKFQCI
Trigger: TATGCATTGGAATTTGCCTCAAGTAAACCTGTTTGC...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR TCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGCATCTGCTTTCACGATaGTCAAAAATATATGCCCAG +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLHLLSR*SKIYAQ
Trigger: CTGGGCATATATTTTTGATCATCGTGAAAGCAGATG...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCCTATCCTTCAAGGCTTaGTGTAGTATCTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVLSFKA*CSIWVS
Trigger: TGACACCCAGATACTACAGCAAGCCTTGAAGGATAG...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGATCATTGCCAGGAAGTaGTGTTTGGTAGTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLIIARK*CLVVSC
Trigger: ACAACTTACTACCAAACAGCACTTCCTGGCAATGAT...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGACATGCTTTATTCTCTaGTATGCTGGCTTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLTCFIL*YAGFKN
Trigger: GTTCTTGAAGCCAGCATAGCAGAGAATAAAGCATGT...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCGCTTCTAGGCACTCATaGAGATCTTTGAACCCATTG +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVASRHS*RSLNPL
Trigger: CAATGGGTTCAAAGATCTGCATGAGTGCCTAGAAGC...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCCGCTCACAGAGTTCATaGGTGGAATATGAAGGTAAC +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVRSQSS*VEYEGN
Trigger: GTTACCTTCATATTCCACGCATGAACTCTGTGAGCG...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCGCTTGCTGTAGTATCTaGGTGTCATTAATCCCCGTA +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVACCSI*VSLIPV
Trigger: TACGGGGATTAATGACACCCAGATACTACAGCAAGC...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGACATTTGTATCTGCTTaGCTTCCCACACTGATGTAT +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLTFVSA*LPTLMY
Trigger: ATACATCAGTGTGGGAAGCCAAGCAGATACAAATGT...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTACCATGGGGTTCTTTaGCTTCTCTTCATCCGTCTC +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARYHGVL*LLFIRL
Trigger: GAGACGGATGAAGAGAAGCCAAAGAACCCCATGGTA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGGTAAACCAATGCTCTTaGCCTGATTTTCCTGAATTC +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLVNQCS*PDFPEF
Trigger: GAATTCAGGAAAATCAGGCCAAGAGCATTGGTTTAC...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCCCAAGGGGAATCGTTTaGGACCGGAACCATAGCTTA +
Preference number: 4 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPPRGIV*DRNHSL
Trigger: TAAGCTATGGTTCCGGTCCCAAACGATTCCCCTTGG...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR CCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTATGGAACCACTAGGTaGGGAACTAGCGTCAATATC +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVYGTTR*GTSVNI
Trigger: GATATTGACGCTAGTTCCCCACCTAGTGGTTCCATA...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTCCTGCAAAGCTTTCTaGGCAAGTTGTGCATCCCAT +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARSCKAF*ASCASH
Trigger: ATGGGATGCACAACTTGCCCAGAAAGCTTTGCAGGA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGATAATCGGTTTCTGGTaGGGTGTCTTCTTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARIIGFW*GVFLGQ
Trigger: TTGGCCCAAGAAGACACCCCACCAGAAACCGATTAT...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCACTGCAACAGGAAGGTaGCAAAAGCATAGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVTATGR*QKHSFA
Trigger: GGCAAAACTATGCTTTTGCCACCTTCCTGTTGCAGT...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR TCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGAAGGCAATTGCTCTCTaGAGATCATCTTTATCATCT +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLKAIAL*RSSLSS
Trigger: AGATGATAAAGATGATCTTCAGAGAGCAATTGCCTT...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR TCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTTTCGGGGTAAATCTTaGGCATTTGATGGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARFRGKS*AFDGGL
Trigger: CAAGCCTCCATCAAATGCTCAAGATTTACCCCGAAA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR TCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGTTTGTTGTAATACCGTaGGGTAATCTTTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLFVVIP*GNLSVS
Trigger: AGAGACTGAAAGATTACCTCACGGTATTACAACAAA...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR TCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGGGAGGTATCCGGGACTaGGTAAATGGTTTGTGTATT +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARGGIRD*VNGLCI
Trigger: AATACACAAACCATTTACTCAGTCCCGGATACCTCC...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR TCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGATTTCCAGTTTGGCTTaGGCAACTTTCATTATGTTG +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLISSLA*ATFIML
Trigger: CAACATAATGAAAGTTGCTCAAGCCAAACTGGAAAT...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGCAAACTCAAGGCAATTaGTCTCTGAAGATCATCTTT +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLQTQGN*SLKIIF
Trigger: AAAGATGATCTTCAGAGAGCAATTGCCTTGAGTTTG...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCCCACAGCCAGGAATCTaGCATAGAACAACTCTACCA +
Preference number: 4 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPPQPGI*HRTTLP
Trigger: TGGTAGAGTTGTTCTATGGCAGATTCCTGGCTGTGG...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCCCTGTTGTTCTGTTGTaGTTGGTAATGTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVPVVLL*LVMSVM
Trigger: CATCACAGACATTACCAAGCACAACAGAACAACAGG...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCCTGATGAAGGTGATGTaGTTGGCAGTTCTGAAGATA +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVLMKVM*LAVLKI
Trigger: TATCTTCAGAACTGCCAAGCACATCACCTTCATCAG...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCGATGGATTCTGGATATaGTTTCCTGCAAATCTCTGG +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVDGFWI*FPANLW
Trigger: CCAGAGATTTGCAGGAAAGCATATCCAGAATCCATC...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTCACTTCTTGATGGCTaGTCTAGATATTCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVSLLDG*SRYSGS
Trigger: AGACCCAGAATATCTAGAGCAGCCATCAAGAAGTGA...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGCGCTCACAGAGTTCATaGGTGGAATATGAAGGTAAC +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARRSQSS*VEYEGN
Trigger: GTTACCTTCATATTCCACGCATGAACTCTGTGAGCG...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGTTCAGCTTTATTGTCTaGAGTCTGACTAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLFSFIV*SLTKVC
Trigger: ACAGACTTTAGTCAGACTGCAGACAATAAAGCTGAA...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCGCCATGATAATACCTTaGATGTTCGGTGTCATCATG +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVAMIIP*MFGVIM
Trigger: CATGATGACACCGAACATGCAAGGTATTATCATGGC...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCCAAAACAGGTTCCGGTaGCATACTAAGTTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVQNRFR*HTKFKN
Trigger: GTTCTTGAACTTAGTATGGCACCGGAACCTGTTTTG...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR CCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGGCTTGCTGTAGTATCTaGGTGTCATTAATCCCCGTA +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARACCSI*VSLIPV
Trigger: TACGGGGATTAATGACACCCAGATACTACAGCAAGC...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGCTGATCTCGATGAAATaGCAGCAACTGATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARLISMK*QQLMKV
Trigger: CACCTTCATCAGTTGCTGCCATTTCATCGAGATCAG...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCCTTTTCTTGGAGGTGTaGTTCCATTTCTTGACCAAG +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVLFLEV*FHFLTK
Trigger: CTTGGTCAAGAAATGGAACCACACCTCCAAGAAAAG...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTCTGTCAGCTTTTCTTaGAGGTGTGGTTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVSVSFS*RCGSIS
Trigger: AGAAATGGAACCACACCTCCAAGAAAAGCTGACAGA...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGACTGCAACAGGAAGGTaGCAAAAGCATAGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARTATGR*QKHSFA
Trigger: GGCAAAACTATGCTTTTGCCACCTTCCTGTTGCAGT...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR TCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCGTAATTTCTCTCAGTTaGTTCAAAAACGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVVISLS*FKNVCW
Trigger: CCAGCAGACGTTTTTGAATCAACTGAGAGAAATTAC...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR TCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCGGTCTTCCCAATGCCTaGTTAAATTCAAATCTTGAC +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVGLPNA*LNSNLD
Trigger: GTCAAGATTTGAATTTAATCAGGCATTGGGAAGACC...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR TCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGAATTCCAATGCATACTaGAGAACATCTACCAAGGGG +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARNSNAY*RTSTKG
Trigger: CCCCTTGGTAGATGTTCTTCAGTATGCATTGGAATT...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR TCA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCGGAGGTATCCGGGACTaGGTAAATGGTTTGTGTATT +
Preference number: 4 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPGGIRD*VNGLCI
Trigger: AATACACAAACCATTTACTCAGTCCCGGATACCTCC...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR TCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTTAGCTTGGCCTTCGTaGACTAAAACGGCATGTAAT +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARLAWPS*TKTACN
Trigger: ATTACATGCCGTTTTAGTTCACGAAGGCCAAGCTAA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR TCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCCATCTGCTTTCACGATaGTCAAAAATATATGCCCAG +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVHLLSR*SKIYAQ
Trigger: CTGGGCATATATTTTTGATCATCGTGAAAGCAGATG...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR TCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTGTCACAGAAGTCTCTaGCTCTCTCAATTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARCHRSL*LSQFLR
Trigger: TCTCAGAAATTGAGAGAGTCAGAGACTTCTGTGACA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR TCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTCTGATAAGCACAGATaGGGAACAGCAAGGAATCTA +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARSDKHR*GTARNL
Trigger: TAGATTCCTTGCTGTTCCTCATCTGTGCTTATCAGA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCCTATCCTTCAAGGCTTaGTGTAGTATCTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPLSFKA*CSIWVS
Trigger: TGACACCCAGATACTACAGCAAGCCTTGAAGGATAG...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCAATCACATTTGTATCTaGTTGGCTTCCCACACTGAT +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVNHICI*LASHTD
Trigger: ATCAGTGTGGGAAGCCAAGCAGATACAAATGTGATT...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGCTTTATTCTCTGCTATaGTGGCTTCAAGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARLYSLL*WLQELC
Trigger: GCAGAGTTCTTGAAGCCAGCATAGCAGAGAATAAAG...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCACATGCTTTATTCTCTaGTATGCTGGCTTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVTCFIL*YAGFKN
Trigger: GTTCTTGAAGCCAGCATAGCAGAGAATAAAGCATGT...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGGATGGATTCTGGATATaGTTTCCTGCAAATCTCTGG +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARDGFWI*FPANLW
Trigger: CCAGAGATTTGCAGGAAAGCATATCCAGAATCCATC...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCATACCAACAAGGGGCTaGCCAGTTTCTTTATTAAAC +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVIPTRG*PVSLLN
Trigger: GTTTAATAAAGAAACTGGGCAGCCCCTTGTTGGTAT...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTCACTTCTTGATGGCTaGTCTAGATATTCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARSLLDG*SRYSGS
Trigger: AGACCCAGAATATCTAGAGCAGCCATCAAGAAGTGA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGAAGAGTTCTGCGGCTTaGTCATTTAATTTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLKSSAA*SFNFSK
Trigger: TTTGCTAAAATTAAATGAGCAAGCCGCAGAACTCTT...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTGTTCAGGGAAAGTGTaGAGTTTATCTTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARCSGKV*SLSSIS
Trigger: GCTGATGGAAGATAAACTGCACACTTTCCCTGAACA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCGTCATCATGATCGACTaGAAAACTGTTTCAGGACTT +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVVIMID*KTVSGL
Trigger: AAGTCCTGAAACAGTTTTGCAGTCGATCATGATGAC...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR GCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGGGACTGGAAAACCAATaGAGAAATCTGCTCAGTAGA +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARGLENQ*RNLLSR
Trigger: TCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTCC...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR CCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCACATTTGTATCTGCTTaGCTTCCCACACTGATGTAT +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVTFVSA*LPTLMY
Trigger: ATACATCAGTGTGGGAAGCCAAGCAGATACAAATGT...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGAGAACAACTCTACCATaGGGTTCTTTGGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARRTTLP*GSLASL
Trigger: AAGAGAAGCCAAAGAACCCCATGGTAGAGTTGTTCT...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCGTAAACCAATGCTCTTaGCCTGATTTTCCTGAATTC +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVVNQCS*PDFPEF
Trigger: GAATTCAGGAAAATCAGGCCAAGAGCATTGGTTTAC...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGTTTCCTGCAAATCTCTaGTGTCATTTTCTATTTCTG +
Preference number: 4 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLFPANL*CHFLFL
Trigger: CAGAAATAGAAAATGACACCAGAGATTTGCAGGAAA...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTCTGTCAGCTTTTCTTaGAGGTGTGGTTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARSVSFS*RCGSIS
Trigger: AGAAATGGAACCACACCTCCAAGAAAAGCTGACAGA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGCACAGAGTTCATGCGTaGAATATGAAGGTAACTTCG +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARHRVHA*NMKVTS
Trigger: CGAAGTTACCTTCATATTCCACGCATGAACTCTGTG...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR TCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCAAGGCAATTGCTCTCTaGAGATCATCTTTATCATCT +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVKAIAL*RSSLSS
Trigger: AGATGATAAAGATGATCTTCAGAGAGCAATTGCCTT...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR TCA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCTTAGCTTGGCCTTCGTaGACTAAAACGGCATGTAAT +
Preference number: 4 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPLAWPS*TKTACN
Trigger: ATTACATGCCGTTTTAGTTCACGAAGGCCAAGCTAA...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR TCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCATTTCCAGTTTGGCTTaGGCAACTTTCATTATGTTG +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVISSLA*ATFIML
Trigger: CAACATAATGAAAGTTGCTCAAGCCAAACTGGAAAT...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGATCATTGCCAGGAAGTaGTGTTTGGTAGTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARIIARK*CLVVSC
Trigger: ACAACTTACTACCAAACAGCACTTCCTGGCAATGAT...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGCTGGATATGCTTTCCTaGAAATCTCTGGTGTCATTT +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARLDMLS*KSLVSF
Trigger: AAATGACACCAGAGATTTGCAGGAAAGCATATCCAG...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTTCAGCTTTATTGTCTaGAGTCTGACTAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVFSFIV*SLTKVC
Trigger: ACAGACTTTAGTCAGACTGCAGACAATAAAGCTGAA...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCCAACATACTTCCTTTTaGTACCAACAAGAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVQHTSF*YQQEVQ
Trigger: TTGCACTTCTTGTTGGTACCAAAAGGAAGTATGTTG...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTCTTCAGCTTTCATTTaGAAGGCATCTTCTAACCAA +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVSSAFI*KASSNQ
Trigger: TTGGTTAGAAGATGCCTTCCAAATGAAAGCTGAAGA...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCAGAACAACTCTACCATaGGGTTCTTTGGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPRTTLP*GSLASL
Trigger: AAGAGAAGCCAAAGAACCCCATGGTAGAGTTGTTCT...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR CCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTTGTTCGATGGATTCTaGATATGCTTTCCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVLFDGF*ICFPAN
Trigger: ATTTGCAGGAAAGCATATCCAGAATCCATCGAACAA...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCAACTTCGGTGGCTCATaGAAACTTTTAATCTCCATA +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVNFGGS*KLLISI
Trigger: TATGGAGATTAAAAGTTTCCATGAGCCACCGAAGTT...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR TCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGAATTTCAACTGCTCTTaGTGGATCAACATACTTCCT +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARNFNCS*WINILP
Trigger: AGGAAGTATGTTGATCCATCAAGAGCAGTTGAAATT...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR TCA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCGGTCTTCCCAATGCCTaGTTAAATTCAAATCTTGAC +
Preference number: 4 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPGLPNA*LNSNLD
Trigger: GTCAAGATTTGAATTTAATCAGGCATTGGGAAGACC...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR TCA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCGCAAACAGGTTTACTTaGGGCAAATTCCAATGCATA +
Preference number: 4 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPANRFT*GKFQCI
Trigger: TATGCATTGGAATTTGCCTCAAGTAAACCTGTTTGC...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR TCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGACTTTGGGATTCTCTTaGAATAATCACCTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARTLGFS*NNHLAV
Trigger: TACAGCAAGGTGATTATTTCAAGAGAATCCCAAAGT...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR GCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGCAAACTCAAGGCAATTaGTCTCTGAAGATCATCTTT +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARQTQGN*SLKIIF
Trigger: AAAGATGATCTTCAGAGAGCAATTGCCTTGAGTTTG...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGAATTCAGTAAACCAATaGTCTTGGCCTGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARNSVNQ*SWPDFP
Trigger: AGGAAAATCAGGCCAAGAGCATTGGTTTACTGAATT...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTTCTGGTCTTCCCAATaGCTGATTAAATTCAAATCT +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVFWSSQ*LIKFKS
Trigger: AGATTTGAATTTAATCAGGCATTGGGAAGACCAGAA...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCATACCAACAAGGGGCTaGCCAGTTTCTTTATTAAAC +
Preference number: 4 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPIPTRG*PVSLLN
Trigger: GTTTAATAAAGAAACTGGGCAGCCCCTTGTTGGTAT...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCATATTCCAACTTAATTaGCGACTGCAAAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVIFQLN*RLQNCF
Trigger: GAAACAGTTTTGCAGTCGGCAATTAAGTTGGAATAT...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285679.10
CDS-3UTR GCA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCCAACTTAACCAACCTTaGATATTCCAACTTAATTGC +
Preference number: 4 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVQLNQP*IFQLNC
Trigger: GCAATTAAGTTGGAATATGCAAGGTTGGTTAAGTTG...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGCAACATACTTCCTTTTaGTACCAACAAGAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARQHTSF*YQQEVQ
Trigger: TTGCACTTCTTGTTGGTACCAAAAGGAAGTATGTTG...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTCTTCAGCTTTCATTTaGAAGGCATCTTCTAACCAA +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARSSAFI*KASSNQ
Trigger: TTGGTTAGAAGATGCCTTCCAAATGAAAGCTGAAGA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGAACTTCGGTGGCTCATaGAAACTTTTAATCTCCATA +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARNFGGS*KLLISI
Trigger: TATGGAGATTAAAAGTTTCCATGAGCCACCGAAGTT...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGAAGAGTTCTGCGGCTTaGTCATTTAATTTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARKSSAA*SFNFSK
Trigger: TTTGCTAAAATTAAATGAGCAAGCCGCAGAACTCTT...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR GCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGATATTCCAACTTAATTaGCTTAAAGAACCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARIFQLN*LKEPCF
Trigger: GAAGCAGGGTTCTTTAAGGCAATTAAGTTGGAATAT...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR CCA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCTTGTTCGATGGATTCTaGATATGCTTTCCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPLFDGF*ICFPAN
Trigger: ATTTGCAGGAAAGCATATCCAGAATCCATCGAACAA...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR CCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGAATTCAATTGTTCGATaGATTCTGGATATGCTTTCC +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARNSIVR*ILDMLS
Trigger: GGAAAGCATATCCAGAATCCATCGAACAATTGAATT...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CCA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGCTCAATAATTTTCTTTaGTGCCTGGTTCTGGATAAA +
Preference number: 4 (lower is better)
Translates to: KKLKTIAATSKPCDRKARLNNFL*CLVLDK
Trigger: TTTATCCAGAACCAGGCACCAAAGAAAATTATTGAG...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR GCA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCACCAATGCAGAAATCTaGTCAGTAGACAACTTAAAA +
Preference number: 4 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPTNAEI*SVDNLK
Trigger: TTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGT...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR CCA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCAATTCAATTGTTCGATaGATTCTGGATATGCTTTCC +
Preference number: 4 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPNSIVR*ILDMLS
Trigger: GGAAAGCATATCCAGAATCCATCGAACAATTGAATT...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS TCA 90 bp GCCGGCGTGCGCGGGCACCGCGGGCAGGCGGCGAAACGCCGACTGTaGGGGCCACGGCGGCCGCCTCACGTCTCCACGCGGCCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: AGVRGHRGQAAKRRL*GPRRPPHVSTRPAS
Trigger: TGAGGCGGGCCGCGTGGAGACGTGAGGCGGCCGCCGTGGCCCTCACAGTCGGCGTTTCGCCGCCTGCCCGCGGTGCCCGCGCACGCCGGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
CDS GCA 90 bp GACAGCGCCCCCGCCAGCCAGGCGCGAAGGCGATGGCGGCCGGCGTaGGCGGGCACCGCGGGCAGGCGGCGAAACGCCGACTGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: DSAPASQARRRWRPA*AGTAGRRRNADCEG
Trigger: GCCCTCACAGTCGGCGTTTCGCCGCCTGCCCGCGGTGCCCGCGCACGCCGGCCGCCATCGCCTTCGCGCCTGGCTGGCGGGGGCGCTGTC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
CDS CCA 90 bp GCTTCTGCGCCGCGCTCTGCTGCAGCACGTTCTGCTCCACGGTCATaGCCCCCGCGGCGGCGGCGGCGGCGGCGGCGGTGGCGCCCGGCT +
Preference number: 5 (lower is better)
Translates to: ASAPRSAAARSAPRS*PPRRRRRRRRWRPA
Trigger: AGCCGGGCGCCACCGCCGCCGCCGCCGCCGCCGCCGCGGGGGCCATGACCGTGGAGCAGAACGTGCTGCAGCAGAGCGCGGCGCAGAAGC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
CDS GCA 90 bp GCGCGAGCCAGTCGGGCGGCGTCACGCGTTCGCACGTTCCTTTGCTaGCGGTCCGCGGGCTGCTTTGGGGAAGGGAGAGAGGGGACGGAG +
Preference number: 5 (lower is better)
Translates to: ARASRAASRVRTFLC*RSAGCFGEGREGTE
Trigger: CTCCGTCCCCTCTCTCCCTTCCCCAAAGCAGCCCGCGGACCGGCAGCAAAGGAACGTGCGAACGCGTGACGCCGCCCGACTGGCTCGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400183.7
CDS GCA 90 bp AGAGCGCGAGCCAGTCGGGCGGCGTCACGCGTTCGCACGTTCCTTTaGTGCCGGTCCGCGGGCTGCTTTGGGGAAGGGAGAGAGGGGACG +
Preference number: 5 (lower is better)
Translates to: RARASRAASRVRTFL*CRSAGCFGEGREGT
Trigger: CGTCCCCTCTCTCCCTTCCCCAAAGCAGCCCGCGGACCGGCAGCAAAGGAACGTGCGAACGCGTGACGCCGCCCGACTGGCTCGCGCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400183.7
CDS-3UTR CAA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGCGTTCGCACGTTCCTTaGCTGCCGGTCCGCGGGCTG +
Preference number: 5 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLRSHVP*LPVRGL
Trigger: CAGCCCGCGGACCGGCAGCAAAGGAACGTGCGAACG...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS GCA 90 bp CTCTGCTTGCACTTCTCTCTCCTGCCACCATGTGATGAAGGTCCTTaGTTCCCCTTCACCTTCCGCCATCATTTTAAGTTTCCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: LCLHFSLLPPCDEGP*FPFTFRHHFKFPEA
Trigger: GGCCTCAGGAAACTTAAAATGATGGCGGAAGGTGAAGGGGAAGCAAGGACCTTCATCACATGGTGGCAGGAGAGAGAAGTGCAAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478932.1
CDS-3UTR CAA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGCGTTCGCACGTTCCTTaGCTGCCGGTCCGCGGGCTG +
Preference number: 5 (lower is better)
Translates to: KKLKTIAATSKPCDRKARRSHVP*LPVRGL
Trigger: CAGCCCGCGGACCGGCAGCAAAGGAACGTGCGAACG...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS GCA 90 bp CGATGTAAACAACTTTCCAGCACAGAAAGTTCTTCCTCCGTTATGTaGCTTGGTGCCGGATGCATGGGCAAATCTGGAGGTATCCGGGAC +
Preference number: 5 (lower is better)
Translates to: RCKQLSSTESSSSVM*LGAGCMGKSGGIRD
Trigger: GTCCCGGATACCTCCAGATTTGCCCATGCATCCGGCACCAAGGCACATAACGGAGGAAGAACTTTCTGTGCTGGAAAGTTGTTTACATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000400183.7
ENST00000453553.1
CDS-3UTR CAA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCCGTTCGCACGTTCCTTaGCTGCCGGTCCGCGGGCTG +
Preference number: 5 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPRSHVP*LPVRGL
Trigger: CAGCCCGCGGACCGGCAGCAAAGGAACGTGCGAACG...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS TCA 90 bp TGCCTTGGTGCCGGATGCATGGGCAAATCTGGAGGTATCCGGGACTaGGTAAATGGTTTGTGTATTACTGATCTCGATGAAATGGCAGCA +
Preference number: 5 (lower is better)
Translates to: CLGAGCMGKSGGIRD*VNGLCITDLDEMAA
Trigger: TGCTGCCATTTCATCGAGATCAGTAATACACAAACCATTTACTCAGTCCCGGATACCTCCAGATTTGCCCATGCATCCGGCACCAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000400183.7
ENST00000453553.1
CDS GCA 90 bp ATCTGCTTGGCTTCCCACACTGATGTATCTATCATTGCCAGGAAGTaGTGTTTGGTAGTAAGTTGTCTCCTCCTGCTGAGGGGTCTTAGC +
Preference number: 5 (lower is better)
Translates to: ICLASHTDVSIIARK*CLVVSCLLLLRGLS
Trigger: GCTAAGACCCCTCAGCAGGAGGAGACAACTTACTACCAAACAGCACTTCCTGGCAATGATAGATACATCAGTGTGGGAAGCCAAGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
CDS-3UTR CAA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGCTGTTTGGTAGTAAGTaGTCTCCTCCTGCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLLFGSK*SPPAEG
Trigger: CCCCTCAGCAGGAGGAGACAACTTACTACCAAACAG...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CAA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGCCTCCGTTATGTGCCTaGGTGCCGGATGCATGGGCA +
Preference number: 5 (lower is better)
Translates to: KKLKTIAATSKPCDRKARPPLCA*VPDAWA
Trigger: TGCCCATGCATCCGGCACCAAGGCACATAACGGAGG...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CAA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGTGGTGGGGTGTCTTCTaGGGCCAACTTAACCAACCT +
Preference number: 5 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLWWGVF*GQLNQP
Trigger: AGGTTGGTTAAGTTGGCCCAAGAAGACACCCCACCA...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS TCA 90 bp TTCCCCAGTGCTGTTCTTGTGACAGGGAGTGAGTCTCATGAGATCTaGTGGTTTCATAAGCATCTGGCATTTCCTCTGCTTGCACTTCTC +
Preference number: 5 (lower is better)
Translates to: FPSAVLVTGSESHEI*WFHKHLAFPLLALL
Trigger: GAGAAGTGCAAGCAGAGGAAATGCCAGATGCTTATGAAACCATCAGATCTCATGAGACTCACTCCCTGTCACAAGAACAGCACTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478932.1
CDS TCA 90 bp GGAGGTGATCAGATCATAGGGACAGTTTCCCCAGTGCTGTTCTTGTaGCAGGGAGTGAGTCTCATGAGATCTGATGGTTTCATAAGCATC +
Preference number: 5 (lower is better)
Translates to: GGDQIIGTVSPVLFL*QGVSLMRSDGFISI
Trigger: GATGCTTATGAAACCATCAGATCTCATGAGACTCACTCCCTGTCACAAGAACAGCACTGGGGAAACTGTCCCTATGATCTGATCACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478932.1
CDS-3UTR CAA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGCTACCATGGGGTTCTTaGGCTTCTCTTCATCCGTCT +
Preference number: 5 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLLPWGS*ASLHPS
Trigger: AGACGGATGAAGAGAAGCCAAAGAACCCCATGGTAG...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CAA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCCCTCCGTTATGTGCCTaGGTGCCGGATGCATGGGCA +
Preference number: 5 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPPPLCA*VPDAWA
Trigger: TGCCCATGCATCCGGCACCAAGGCACATAACGGAGG...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR CAA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGCTGCTGCTTGTGCTGTaGTCACAGAAGTCTCTGACT +
Preference number: 5 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLLLLVL*SQKSLT
Trigger: AGTCAGAGACTTCTGTGACAACAGCACAAGCAGCAG...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS GCA 90 bp GTATTACTGATCTCGATGAAATGGCAGCAACTGATGAAGGTGATGTaGTTGGCAGTTCTGAAGATAGGGCTCCCTGTTGTTCTGTTGTGC +
Preference number: 5 (lower is better)
Translates to: VLLISMKWQQLMKVM*LAVLKIGLPVVLLC
Trigger: GCACAACAGAACAACAGGGAGCCCTATCTTCAGAACTGCCAAGCACATCACCTTCATCAGTTGCTGCCATTTCATCGAGATCAGTAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000400183.7
ENST00000453553.1
CDS GCA 90 bp CGACTGAGGGACAACATGATTCGGGCAAATCGCTCACAGAGTTCATaGGTGGAATATGAAGGTAACTTCGGTGGCTCATGGAAACTTTTA +
Preference number: 5 (lower is better)
Translates to: RLRDNMIRANRSQSS*VEYEGNFGGSWKLL
Trigger: TAAAAGTTTCCATGAGCCACCGAAGTTACCTTCATATTCCACGCATGAACTCTGTGAGCGATTTGCCCGAATCATGTTGTCCCTCAGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
ENST00000478932.1
CDS-3UTR CAA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCCTGTTTGGTAGTAAGTaGTCTCCTCCTGCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVLFGSK*SPPAEG
Trigger: CCCCTCAGCAGGAGGAGACAACTTACTACCAAACAG...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CAA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGAGCCCAACGGGAGCTTaGTCCTGTCTTTTTCTATCA +
Preference number: 5 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLSPTGA*SCLFLS
Trigger: TGATAGAAAAAGACAGGACAAAGCTCCCGTTGGGCT...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CAA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGCTCCCTGTTGTTCTGTaGTGCTTGGTAATGTCTGTG +
Preference number: 5 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLLPVVL*CLVMSV
Trigger: CACAGACATTACCAAGCACAACAGAACAACAGGGAG...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CAA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGGGTCTCCTGCTGCTaGTGCTGTTGTCACAGAAGT +
Preference number: 5 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVWVSCC*CCCHRS
Trigger: ACTTCTGTGACAACAGCACAAGCAGCAGGAGACCCA...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS TCA 90 bp GGCTTGTTCCTCATCAGTTATTCCAGTCTCCCTGAATGCCCTGTTTaGTTCGGCCAAACTCAAGGCAATTGCTCTCTGAAGATCATCTTT +
Preference number: 5 (lower is better)
Translates to: GLFLISYSSLPECPV*FGQTQGNCSLKIIF
Trigger: AAAGATGATCTTCAGAGAGCAATTGCCTTGAGTTTGGCCGAATCAAACAGGGCATTCAGGGAGACTGGAATAACTGATGAGGAACAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
ENST00000547201.5
ENST00000549362.1
CDS CCA 90 bp CCCTACATGAGGGATCGCCACCTCTACAACTCGCTGATTAGAAAGTaGTTGGCTTGTAGTATTTTCAGGTTTCGACTGCAAAACTGTTTC +
Preference number: 5 (lower is better)
Translates to: PYMRDRHLYNSLIRK*LACSIFRFRLQNCF
Trigger: GAAACAGTTTTGCAGTCGAAACCTGAAAATACTACAAGCCAACCACTTTCTAATCAGCGAGTTGTAGAGGTGGCGATCCCTCATGTAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400183.7
ENST00000449491.1
CDS-3UTR CAA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCGCCAGGAAGTGCTGTTaGGTAGTAAGTTGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVARKCC*VVSCLL
Trigger: GAGGAGACAACTTACTACCAAACAGCACTTCCTGGC...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CAA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCCTACCATGGGGTTCTTaGGCTTCTCTTCATCCGTCT +
Preference number: 5 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVLPWGS*ASLHPS
Trigger: AGACGGATGAAGAGAAGCCAAAGAACCCCATGGTAG...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CAA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTGGGTCTCCTGCTGCTaGTGCTGTTGTCACAGAAGT +
Preference number: 5 (lower is better)
Translates to: KKLKTIAATSKPCDRKARWVSCC*CCCHRS
Trigger: ACTTCTGTGACAACAGCACAAGCAGCAGGAGACCCA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CAA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGATCTGTCAGCTTTTCTaGGAGGTGTGGTTCCATTTC +
Preference number: 5 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLICQLF*EVWFHF
Trigger: GAAATGGAACCACACCTCCAAGAAAAGCTGACAGAT...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS GCA 90 bp CCTCCAAACTTCTGTAGGTGTCCTCTTCAAACATGCTTTATTCTCTaGTATGCTGGCTTCAAGAACTCTGCTAATGGCTTGTTCCTCATC +
Preference number: 5 (lower is better)
Translates to: PPNFCRCPLQTCFIL*YAGFKNSANGLFLI
Trigger: GATGAGGAACAAGCCATTAGCAGAGTTCTTGAAGCCAGCATAGCAGAGAATAAAGCATGTTTGAAGAGGACACCTACAGAAGTTTGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
ENST00000547201.5
ENST00000549362.1
CDS-3UTR CAA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGGCCAGGAAGTGCTGTTaGGTAGTAAGTTGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: KKLKTIAATSKPCDRKARARKCC*VVSCLL
Trigger: GAGGAGACAACTTACTACCAAACAGCACTTCCTGGC...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CAA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGAACTCTGCTAATGGCTaGTTCCTCATCAGTTATTCC +
Preference number: 5 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLNSANG*FLISYS
Trigger: GGAATAACTGATGAGGAACAAGCCATTAGCAGAGTT...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CAA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCAGCCCAACGGGAGCTTaGTCCTGTCTTTTTCTATCA +
Preference number: 5 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVSPTGA*SCLFLS
Trigger: TGATAGAAAAAGACAGGACAAAGCTCCCGTTGGGCT...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CAA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGTTTCTCCTTCAATCATaGCAGCTTCTAGGCACTCAT +
Preference number: 5 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLFLLQS*QLLGTH
Trigger: ATGAGTGCCTAGAAGCTGCAATGATTGAAGGAGAAA...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CAA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGGTTGTTCTGTTGTGCTaGGTAATGTCTGTGATGGTA +
Preference number: 5 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLVVLLC*VMSVMV
Trigger: TACCATCACAGACATTACCAAGCACAACAGAACAAC...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CAA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCATGAAGGTGATGTGCTaGGCAGTTCTGAAGATAGGG +
Preference number: 5 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVMKVMC*AVLKIG
Trigger: CCCTATCTTCAGAACTGCCAAGCACATCACCTTCAT...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS TCA 90 bp CTGAATGCCCTGTTTGATTCGGCCAAACTCAAGGCAATTGCTCTCTaGAGATCATCTTTATCATCTCCAGTGAGATCAATCACATCTTCC +
Preference number: 5 (lower is better)
Translates to: LNALFDSAKLKAIAL*RSSLSSPVRSITSS
Trigger: GGAAGATGTGATTGATCTCACTGGAGATGATAAAGATGATCTTCAGAGAGCAATTGCCTTGAGTTTGGCCGAATCAAACAGGGCATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547201.5
ENST00000549362.1
CDS-3UTR CAA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGCGTAATTTCTCTCAGTaGATTCAAAAACGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLRNFSQ*IQKRLL
Trigger: CAGCAGACGTTTTTGAATCAACTGAGAGAAATTACG...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CAA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGTCAACATACTTCCTTTaGGTACCAACAAGAAGTGCA +
Preference number: 5 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLSTYFL*VPTRSA
Trigger: TGCACTTCTTGTTGGTACCAAAAGGAAGTATGTTGA...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CAA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGGAATTTCAACTGCTCTaGATGGATCAACATACTTCC +
Preference number: 5 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLEFQLL*MDQHTS
Trigger: GGAAGTATGTTGATCCATCAAGAGCAGTTGAAATTC...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CAA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGTGCAAACAGGTTTACTaGAGGCAAATTCCAATGCAT +
Preference number: 5 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLCKQVY*RQIPMH
Trigger: ATGCATTGGAATTTGCCTCAAGTAAACCTGTTTGCA...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CAA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCATCTGTCAGCTTTTCTaGGAGGTGTGGTTCCATTTC +
Preference number: 5 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVICQLF*EVWFHF
Trigger: GAAATGGAACCACACCTCCAAGAAAAGCTGACAGAT...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS TCA 90 bp ACTAGCGTCAATATCGTCAACAGGAGAAGTGCAAACAGGTTTACTTaGGGCAAATTCCAATGCATACTGAAGAACATCTACCAAGGGGAA +
Preference number: 5 (lower is better)
Translates to: TSVNIVNRRSANRFT*GKFQCILKNIYQGE
Trigger: TTCCCCTTGGTAGATGTTCTTCAGTATGCATTGGAATTTGCCTCAAGTAAACCTGTTTGCACTTCTCCTGTTGACGATATTGACGCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000400183.7
CDS GCA 90 bp ATAGTTTCTTCTTTCAAGTGCTTTGAGAAATCACTTCTTGATGGCTaGTCTAGATATTCTGGGTCTCCTGCTGCTTGTGCTGTTGTCACA +
Preference number: 5 (lower is better)
Translates to: IVSSFKCFEKSLLDG*SRYSGSPAACAVVT
Trigger: TGTGACAACAGCACAAGCAGCAGGAGACCCAGAATATCTAGAGCAGCCATCAAGAAGTGATTTCTCAAAGCACTTGAAAGAAGAAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000400183.7
CDS GCA 90 bp CTGTCATATACACTCCTGGATTTACCTATCGCCATGATAATACCTTaGATGTTCGGTGTCATCATGATCGACTGCAAAACTGTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: LSYTLLDLPIAMIIP*MFGVIMIDCKTVSG
Trigger: TCCTGAAACAGTTTTGCAGTCGATCATGATGACACCGAACATGCAAGGTATTATCATGGCGATAGGTAAATCCAGGAGTGTATATGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR CAA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGCTGATGTATCTATCATaGCCAGGAAGTGCTGTTTGG +
Preference number: 5 (lower is better)
Translates to: KKLKTIAATSKPCDRKARLMYLS*PGSAVW
Trigger: CCAAACAGCACTTCCTGGCAATGATAGATACATCAG...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CAA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGCACATTTGTATCTGCTaGGCTTCCCACACTGATGTA +
Preference number: 5 (lower is better)
Translates to: KKLKTIAATSKPCDRKARHICIC*ASHTDV
Trigger: TACATCAGTGTGGGAAGCCAAGCAGATACAAATGTG...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CAA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCAACTCTGCTAATGGCTaGTTCCTCATCAGTTATTCC +
Preference number: 5 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVNSANG*FLISYS
Trigger: GGAATAACTGATGAGGAACAAGCCATTAGCAGAGTT...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CAA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCAGCCCAACGGGAGCTTaGTCCTGTCTTTTTCTATCA +
Preference number: 5 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPSPTGA*SCLFLS
Trigger: TGATAGAAAAAGACAGGACAAAGCTCCCGTTGGGCT...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR CAA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTTTCTCCTTCAATCATaGCAGCTTCTAGGCACTCAT +
Preference number: 5 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVFLLQS*QLLGTH
Trigger: ATGAGTGCCTAGAAGCTGCAATGATTGAAGGAGAAA...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CAA 90 bp CCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCTGCAGTCTGCTTCTTTCAAGTGCTTaGAGAAATCACTTCTTGATG +
Preference number: 5 (lower is better)
Translates to: PVKMSERHAIFSFIVCSLLLSSA*RNHFLM
Trigger: CATCAAGAAGTGATTTCTCAAAGCACTTGAAAGAAG...CAGACTGCAGACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CAA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGCGCCATGATAATACCTaGCATGTTCGGTGTCATCAT +
Preference number: 5 (lower is better)
Translates to: KKLKTIAATSKPCDRKARRHDNT*HVRCHH
Trigger: ATGATGACACCGAACATGCAAGGTATTATCATGGCG...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS TCA 90 bp CTGAATGCCCTGTTTGATTCGGCCAAACTCAAGGCAATTGCTCTCTaGAGATCATCTTTATCATCTCCAGTGAGATCAATCACATTTGTA +
Preference number: 5 (lower is better)
Translates to: LNALFDSAKLKAIAL*RSSLSSPVRSITFV
Trigger: TACAAATGTGATTGATCTCACTGGAGATGATAAAGATGATCTTCAGAGAGCAATTGCCTTGAGTTTGGCCGAATCAAACAGGGCATTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
CDS GCA 90 bp AAATCTCTCAAATCCGGTGGTAATGTTTCTATACCAACAAGGGGCTaGCCAGTTTCTTTATTAAACTCCTCTTGTATTAGGAACTGTGCC +
Preference number: 5 (lower is better)
Translates to: KSLKSGGNVSIPTRG*PVSLLNSSCIRNCA
Trigger: GGCACAGTTCCTAATACAAGAGGAGTTTAATAAAGAAACTGGGCAGCCCCTTGTTGGTATAGAAACATTACCACCGGATTTGAGAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000400183.7
CDS-3UTR CAA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCCGTAATTTCTCTCAGTaGATTCAAAAACGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVRNFSQ*IQKRLL
Trigger: CAGCAGACGTTTTTGAATCAACTGAGAGAAATTACG...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CAA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCCTGATGTATCTATCATaGCCAGGAAGTGCTGTTTGG +
Preference number: 5 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPLMYLS*PGSAVW
Trigger: CCAAACAGCACTTCCTGGCAATGATAGATACATCAG...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR CAA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCCACATTTGTATCTGCTaGGCTTCCCACACTGATGTA +
Preference number: 5 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPHICIC*ASHTDV
Trigger: TACATCAGTGTGGGAAGCCAAGCAGATACAAATGTG...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR CAA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGGTTGTTCTGTTGTGCTaGGTAATGTCTGTGATGGTA +
Preference number: 5 (lower is better)
Translates to: KKLKTIAATSKPCDRKARVVLLC*VMSVMV
Trigger: TACCATCACAGACATTACCAAGCACAACAGAACAAC...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CAA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCGTCACAGCAATATCATaGTACTTCATCCATCTGCTT +
Preference number: 5 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVVTAIS*YFIHLL
Trigger: AAGCAGATGGATGAAGTACAATGATATTGCTGTGAC...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS CCA 90 bp TTAGGAACTGTGCCTTATCATTTATGTACATTAAACAGTATGCACTaGCATTTCTATAACCACCAAAAGAGTCCCTCACTAGCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: LGTVPYHLCTLNSMH*HFYNHQKSPSLALP
Trigger: GGGAAGAGCTAGTGAGGGACTCTTTTGGTGGTTATAGAAATGCCAGTGCATACTGTTTAATGTACATAAATGATAAGGCACAGTTCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000400183.7
ENST00000453553.1
CDS CCA 90 bp TCACAGAGTTCATGCGTGGAATATGAAGGTAACTTCGGTGGCTCATaGAAACTTTTAATCTCCATAGAACAATCAAGCAGTTTTGGCAAA +
Preference number: 5 (lower is better)
Translates to: SQSSCVEYEGNFGGS*KLLISIEQSSSFGK
Trigger: TTTGCCAAAACTGCTTGATTGTTCTATGGAGATTAAAAGTTTCCATGAGCCACCGAAGTTACCTTCATATTCCACGCATGAACTCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
ENST00000478932.1
CDS CCA 90 bp TTAATACAGAAAACTCTCATGGAGCTTACAATTTGGTACAAGGATTaGCAAACTTTTTCTGTGAAGGGCCAGACGAGGACTATTATAGGC +
Preference number: 5 (lower is better)
Translates to: LIQKTLMELTIWYKD*QTFSVKGQTRTIIG
Trigger: GCCTATAATAGTCCTCGTCTGGCCCTTCACAGAAAAAGTTTGCCAATCCTTGTACCAAATTGTAAGCTCCATGAGAGTTTTCTGTATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478932.1
CDS-3UTR CAA 90 bp ACATCAGTTCCGGTTAAAATGTCTGAGCGCCATGCGATTTTCAGCTTTATTGTCGTAAATCTTGAGCATTaGATGGAGGCTTGTAATTCA +
Preference number: 5 (lower is better)
Translates to: TSVPVKMSERHAIFSFIVVNLEH*MEACNS
Trigger: TGAATTACAAGCCTCCATCAAATGCTCAAGATTTAC...GACAATAAAGCTGAAAATCGCATGGCGCTCAGACATTTTAACCGGAACTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CAA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTCAACATACTTCCTTTaGGTACCAACAAGAAGTGCA +
Preference number: 5 (lower is better)
Translates to: KKLKTIAATSKPCDRKARSTYFL*VPTRSA
Trigger: TGCACTTCTTGTTGGTACCAAAAGGAAGTATGTTGA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CAA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGGAATTTCAACTGCTCTaGATGGATCAACATACTTCC +
Preference number: 5 (lower is better)
Translates to: KKLKTIAATSKPCDRKAREFQLL*MDQHTS
Trigger: GGAAGTATGTTGATCCATCAAGAGCAGTTGAAATTC...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CAA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGGTAAATCTTGAGCATTaGATGGAGGCTTGTAATTCA +
Preference number: 5 (lower is better)
Translates to: KKLKTIAATSKPCDRKARVNLEH*MEACNS
Trigger: TGAATTACAAGCCTCCATCAAATGCTCAAGATTTAC...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
CDS-3UTR CAA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCTGCAAACAGGTTTACTaGAGGCAAATTCCAATGCAT +
Preference number: 5 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPCKQVY*RQIPMH
Trigger: ATGCATTGGAATTTGCCTCAAGTAAACCTGTTTGCA...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR CAA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCGTCACAGCAATATCATaGTACTTCATCCATCTGCTT +
Preference number: 5 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPVTAIS*YFIHLL
Trigger: AAGCAGATGGATGAAGTACAATGATATTGCTGTGAC...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR CAA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGTTGAGAAATCACTTCTaGATGGCTGCTCTAGATATT +
Preference number: 5 (lower is better)
Translates to: KKLKTIAATSKPCDRKARLRNHF*MAALDI
Trigger: AATATCTAGAGCAGCCATCAAGAAGTGATTTCTCAA...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CAA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGCTTCTTTCAAGTGCTTaGAGAAATCACTTCTTGATG +
Preference number: 5 (lower is better)
Translates to: KKLKTIAATSKPCDRKARLLSSA*RNHFLM
Trigger: CATCAAGAAGTGATTTCTCAAAGCACTTGAAAGAAG...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CAA 90 bp AAAAAGTTAAAAACTATAGCAGCAACAAGCAAACCCTGTGACAGGAAGGCAAGGCATTTCCAGTTTGGCTaGAGCAACTTTCATTATGTT +
Preference number: 5 (lower is better)
Translates to: KKLKTIAATSKPCDRKARHFQFG*SNFHYV
Trigger: AACATAATGAAAGTTGCTCAAGCCAAACTGGAAATG...CCTTGCCTTCCTGTCACAGGGTTTGCTTGTTGCTGCTATAGTTTTTAACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285679.10
ENST00000285681.6
CDS-3UTR CAA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCGTAAATCTTGAGCATTaGATGGAGGCTTGTAATTCA +
Preference number: 5 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPVNLEH*MEACNS
Trigger: TGAATTACAAGCCTCCATCAAATGCTCAAGATTTAC...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS-3UTR CAA 90 bp GACTGGAAAACCAATGCAGAAATCTGCTCAGTAGACAACTTAAAATCTAAACCCCATTTCCAGTTTGGCTaGAGCAACTTTCATTATGTT +
Preference number: 5 (lower is better)
Translates to: DWKTNAEICSVDNLKSKPHFQFG*SNFHYV
Trigger: AACATAATGAAAGTTGCTCAAGCCAAACTGGAAATG...GGGTTTAGATTTTAAGTTGTCTACTGAGCAGATTTCTGCATTGGTTTTCCAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS GCA 72 bp GCCAGTCGGGCGGCGTCACGCGTTCGCACGTTCCTTTaGTGCCGGTCCGCGGGCTGCTTTGGGGAAGGGAGA +
Preference number: 6 (lower is better)
Translates to: ASRAASRVRTFL*CRSAGCFGEGR
Trigger: TCTCCCTTCCCCAAAGCAGCCCGCGGACCGGCAGCAAAGGAACGTGCGAACGCGTGACGCCGCCCGACTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400183.7
CDS CAA 72 bp AGCCAGTCGGGCGGCGTCACGCGTTCGCACGTTCCTTaGCTGCCGGTCCGCGGGCTGCTTTGGGGAAGGGAG +
Preference number: 6 (lower is better)
Translates to: SQSGGVTRSHVP*LPVRGLLWGRE
Trigger: CTCCCTTCCCCAAAGCAGCCCGCGGACCGGCAGCAAAGGAACGTGCGAACGCGTGACGCCGCCCGACTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400183.7
CDS GCA 72 bp AGTCGGGCGGCGTCACGCGTTCGCACGTTCCTTTGCTaGCGGTCCGCGGGCTGCTTTGGGGAAGGGAGAGAG +
Preference number: 6 (lower is better)
Translates to: SRAASRVRTFLC*RSAGCFGEGRE
Trigger: CTCTCTCCCTTCCCCAAAGCAGCCCGCGGACCGGCAGCAAAGGAACGTGCGAACGCGTGACGCCGCCCGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400183.7
CDS GCA 72 bp AAAAACGTCTGCTGGTGCTTCTGCGCCGCGCTCTGCTaGAGCACGTTCTGCTCCACGGTCATGGCCCCCGCG +
Preference number: 6 (lower is better)
Translates to: KNVCWCFCAALC*STFCSTVMAPA
Trigger: CGCGGGGGCCATGACCGTGGAGCAGAACGTGCTGCAGCAGAGCGCGGCGCAGAAGCACCAGCAGACGTTTTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
CDS GCA 72 bp TTCAAAAACGTCTGCTGGTGCTTCTGCGCCGCGCTCTaGTGCAGCACGTTCTGCTCCACGGTCATGGCCCCC +
Preference number: 6 (lower is better)
Translates to: FKNVCWCFCAAL*CSTFCSTVMAP
Trigger: GGGGGCCATGACCGTGGAGCAGAACGTGCTGCAGCAGAGCGCGGCGCAGAAGCACCAGCAGACGTTTTTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
CDS TCA 72 bp AACCCCCAGGTGTTGAGGAAGAGACCTGGTGGGAGGTaGTCAGATCATAGGGACAGTTTCCCCAGTGCTGTT +
Preference number: 6 (lower is better)
Translates to: NPQVLRKRPGGR*SDHRDSFPSAV
Trigger: AACAGCACTGGGGAAACTGTCCCTATGATCTGATCACCTCCCACCAGGTCTCTTCCTCAACACCTGGGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478932.1
CDS GCA 72 bp CAACTTTCCAGCACAGAAAGTTCTTCCTCCGTTATGTaGCTTGGTGCCGGATGCATGGGCAAATCTGGAGGT +
Preference number: 6 (lower is better)
Translates to: QLSSTESSSSVM*LGAGCMGKSGG
Trigger: ACCTCCAGATTTGCCCATGCATCCGGCACCAAGGCACATAACGGAGGAAGAACTTTCTGTGCTGGAAAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000400183.7
ENST00000453553.1
CDS CCA 72 bp CGTTATGTGCCTTGGTGCCGGATGCATGGGCAAATCTaGAGGTATCCGGGACTGAGTAAATGGTTTGTGTAT +
Preference number: 6 (lower is better)
Translates to: RYVPWCRMHGQI*RYPGLSKWFVY
Trigger: ATACACAAACCATTTACTCAGTCCCGGATACCTCCAGATTTGCCCATGCATCCGGCACCAAGGCACATAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000400183.7
ENST00000453553.1
CDS TCA 72 bp ATCTGGGTGTCATTAATCCCCGTAATTTCTCTCAGTTaGTTCAAAAACGTCTGCTGGTGCTTCTGCGCCGCG +
Preference number: 6 (lower is better)
Translates to: IWVSLIPVISLS*FKNVCWCFCAA
Trigger: CGCGGCGCAGAAGCACCAGCAGACGTTTTTGAATCAACTGAGAGAAATTACGGGGATTAATGACACCCAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
CDS GCA 72 bp GCTTCCCACACTGATGTATCTATCATTGCCAGGAAGTaGTGTTTGGTAGTAAGTTGTCTCCTCCTGCTGAGG +
Preference number: 6 (lower is better)
Translates to: ASHTDVSIIARK*CLVVSCLLLLR
Trigger: CCTCAGCAGGAGGAGACAACTTACTACCAAACAGCACTTCCTGGCAATGATAGATACATCAGTGTGGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
CDS GCA 72 bp GACAACATGATTCGGGCAAATCGCTCACAGAGTTCATaGGTGGAATATGAAGGTAACTTCGGTGGCTCATGG +
Preference number: 6 (lower is better)
Translates to: DNMIRANRSQSS*VEYEGNFGGSW
Trigger: CCATGAGCCACCGAAGTTACCTTCATATTCCACGCATGAACTCTGTGAGCGATTTGCCCGAATCATGTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
ENST00000478932.1
CDS CAA 90 bp CTCATGAGATCTGATGGTTTCATAAGCATCTGGCATTTCCTCTGCTaGCACTTCTCTCTCCTGCCACCATGTGATGAAGGTCCTTGCTTC +
Preference number: 6 (lower is better)
Translates to: LMRSDGFISIWHFLC*HFSLLPPCDEGPCF
Trigger: GAAGCAAGGACCTTCATCACATGGTGGCAGGAGAGAGAAGTGCAAGCAGAGGAAATGCCAGATGCTTATGAAACCATCAGATCTCATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478932.1
CDS TCA 72 bp CTCATCAGTTATTCCAGTCTCCCTGAATGCCCTGTTTaGTTCGGCCAAACTCAAGGCAATTGCTCTCTGAAG +
Preference number: 6 (lower is better)
Translates to: LISYSSLPECPV*FGQTQGNCSLK
Trigger: CTTCAGAGAGCAATTGCCTTGAGTTTGGCCGAATCAAACAGGGCATTCAGGGAGACTGGAATAACTGATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
ENST00000547201.5
ENST00000549362.1
CDS TCA 72 bp GCCGGATGCATGGGCAAATCTGGAGGTATCCGGGACTaGGTAAATGGTTTGTGTATTACTGATCTCGATGAA +
Preference number: 6 (lower is better)
Translates to: AGCMGKSGGIRD*VNGLCITDLDE
Trigger: TTCATCGAGATCAGTAATACACAAACCATTTACTCAGTCCCGGATACCTCCAGATTTGCCCATGCATCCGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000400183.7
ENST00000453553.1
CDS GCA 72 bp TTCCCTTCAAAAACTTCCTACAGAGTCAACACCACGTaGCAGAAATTTCTGCAGATGCAGGGGCACTCAAGT +
Preference number: 6 (lower is better)
Translates to: FPSKTSYRVNTT*QKFLQMQGHSS
Trigger: ACTTGAGTGCCCCTGCATCTGCAGAAATTTCTGGCACGTGGTGTTGACTCTGTAGGAAGTTTTTGAAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478932.1
CDS CAA 72 bp TATCTGGGTGTCATTAATCCCCGTAATTTCTCTCAGTaGATTCAAAAACGTCTGCTGGTGCTTCTGCGCCGC +
Preference number: 6 (lower is better)
Translates to: YLGVINPRNFSQ*IQKRLLVLLRR
Trigger: GCGGCGCAGAAGCACCAGCAGACGTTTTTGAATCAACTGAGAGAAATTACGGGGATTAATGACACCCAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
CDS CAA 72 bp CACACTGATGTATCTATCATTGCCAGGAAGTGCTGTTaGGTAGTAAGTTGTCTCCTCCTGCTGAGGGGTCTT +
Preference number: 6 (lower is better)
Translates to: HTDVSIIARKCC*VVSCLLLLRGL
Trigger: AAGACCCCTCAGCAGGAGGAGACAACTTACTACCAAACAGCACTTCCTGGCAATGATAGATACATCAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
CDS CAA 72 bp GGAATCTGCCATAGAACAACTCTACCATGGGGTTCTTaGGCTTCTCTTCATCCGTCTCCTCTTCAGCTTTCA +
Preference number: 6 (lower is better)
Translates to: GICHRTTLPWGS*ASLHPSPLQLS
Trigger: TGAAAGCTGAAGAGGAGACGGATGAAGAGAAGCCAAAGAACCCCATGGTAGAGTTGTTCTATGGCAGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000400183.7
ENST00000547201.5
CDS TCA 72 bp GCTGTTCTTGTGACAGGGAGTGAGTCTCATGAGATCTaGTGGTTTCATAAGCATCTGGCATTTCCTCTGCTT +
Preference number: 6 (lower is better)
Translates to: AVLVTGSESHEI*WFHKHLAFPLL
Trigger: AAGCAGAGGAAATGCCAGATGCTTATGAAACCATCAGATCTCATGAGACTCACTCCCTGTCACAAGAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478932.1
CDS GCA 72 bp TGGTGGGGTGTCTTCTTGGGCCAACTTAACCAACCTTaGATATTCCAACTTAATTGCCGACTGCAAAACTGT +
Preference number: 6 (lower is better)
Translates to: WWGVFLGQLNQP*IFQLNCRLQNC
Trigger: ACAGTTTTGCAGTCGGCAATTAAGTTGGAATATGCAAGGTTGGTTAAGTTGGCCCAAGAAGACACCCCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285679.10
CDS GCA 72 bp CATTTCCTTCTTCCCACTCACCCAACAGCTATGACATaGCGATTTCATTTCCTTCACCATCATACCTACCGT +
Preference number: 6 (lower is better)
Translates to: HFLLPTHPTAMT*RFHFLHHHTYR
Trigger: ACGGTAGGTATGATGGTGAAGGAAATGAAATCGGCATGTCATAGCTGTTGGGTGAGTGGGAAGAAGGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478932.1
CDS CCA 72 bp GAATCTGCCATAGAACAACTCTACCATGGGGTTCTTTaGCTTCTCTTCATCCGTCTCCTCTTCAGCTTTCAT +
Preference number: 6 (lower is better)
Translates to: ESAIEQLYHGVL*LLFIRLLFSFH
Trigger: ATGAAAGCTGAAGAGGAGACGGATGAAGAGAAGCCAAAGAACCCCATGGTAGAGTTGTTCTATGGCAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000400183.7
ENST00000547201.5
CDS CCA 72 bp AGGGATCGCCACCTCTACAACTCGCTGATTAGAAAGTaGTTGGCTTGTAGTATTTTCAGGTTTCGACTGCAA +
Preference number: 6 (lower is better)
Translates to: RDRHLYNSLIRK*LACSIFRFRLQ
Trigger: TTGCAGTCGAAACCTGAAAATACTACAAGCCAACCACTTTCTAATCAGCGAGTTGTAGAGGTGGCGATCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400183.7
ENST00000449491.1
CDS CAA 90 bp TACATGAGGGATCGCCACCTCTACAACTCGCTGATTAGAAAGTGGTaGGCTTGTAGTATTTTCAGGTTTCGACTGCAAAACTGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: YMRDRHLYNSLIRKW*ACSIFRFRLQNCFR
Trigger: CCTGAAACAGTTTTGCAGTCGAAACCTGAAAATACTACAAGCCAACCACTTTCTAATCAGCGAGTTGTAGAGGTGGCGATCCCTCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400183.7
ENST00000449491.1
CDS GCA 72 bp TCTTTCAAGTGCTTTGAGAAATCACTTCTTGATGGCTaGTCTAGATATTCTGGGTCTCCTGCTGCTTGTGCT +
Preference number: 6 (lower is better)
Translates to: SFKCFEKSLLDG*SRYSGSPAACA
Trigger: AGCACAAGCAGCAGGAGACCCAGAATATCTAGAGCAGCCATCAAGAAGTGATTTCTCAAAGCACTTGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000400183.7
CDS CAA 72 bp GATCGCCACCTCTACAACTCGCTGATTAGAAAGTGGTaGGCTTGTAGTATTTTCAGGTTTCGACTGCAAAAC +
Preference number: 6 (lower is better)
Translates to: DRHLYNSLIRKW*ACSIFRFRLQN
Trigger: GTTTTGCAGTCGAAACCTGAAAATACTACAAGCCAACCACTTTCTAATCAGCGAGTTGTAGAGGTGGCGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400183.7
ENST00000449491.1
CDS CAA 72 bp GAAAACTCTCATGGAGCTTACAATTTGGTACAAGGATaGGCAAACTTTTTCTGTGAAGGGCCAGACGAGGAC +
Preference number: 6 (lower is better)
Translates to: ENSHGAYNLVQG*ANFFCEGPDED
Trigger: GTCCTCGTCTGGCCCTTCACAGAAAAAGTTTGCCAATCCTTGTACCAAATTGTAAGCTCCATGAGAGTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478932.1
CDS CAA 90 bp CCTGTCATATACACTCCTGGATTTACCTATCGCCATGATAATACCTaGCATGTTCGGTGTCATCATGATCGACTGCAAAACTGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: PVIYTPGFTYRHDNT*HVRCHHDRLQNCFR
Trigger: CCTGAAACAGTTTTGCAGTCGATCATGATGACACCGAACATGCAAGGTATTATCATGGCGATAGGTAAATCCAGGAGTGTATATGACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS TCA 72 bp CAATTGCTCTCTGAAGATCATCTTTATCATCTCCAGTaGGATCAATCACATCTTCCTTGCCCTTGCATCCTC +
Preference number: 6 (lower is better)
Translates to: QLLSEDHLYHLQ*DQSHLPCPCIL
Trigger: GAGGATGCAAGGGCAAGGAAGATGTGATTGATCTCACTGGAGATGATAAAGATGATCTTCAGAGAGCAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547201.5
ENST00000549362.1
CDS GCA 72 bp ACACTCCTGGATTTACCTATCGCCATGATAATACCTTaGATGTTCGGTGTCATCATGATCGACTGCAAAACT +
Preference number: 6 (lower is better)
Translates to: TLLDLPIAMIIP*MFGVIMIDCKT
Trigger: AGTTTTGCAGTCGATCATGATGACACCGAACATGCAAGGTATTATCATGGCGATAGGTAAATCCAGGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS GCA 72 bp ACACTCCTGGATTTACCTATCGCCATGATAATACCTTaGATGTTCGGTGTCATCATGATCTCGTCATCATAC +
Preference number: 6 (lower is better)
Translates to: TLLDLPIAMIIP*MFGVIMISSSY
Trigger: GTATGATGACGAGATCATGATGACACCGAACATGCAAGGTATTATCATGGCGATAGGTAAATCCAGGAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400183.7
ENST00000449491.1
CDS CAA 72 bp TACACTCCTGGATTTACCTATCGCCATGATAATACCTaGCATGTTCGGTGTCATCATGATCGACTGCAAAAC +
Preference number: 6 (lower is better)
Translates to: YTPGFTYRHDNT*HVRCHHDRLQN
Trigger: GTTTTGCAGTCGATCATGATGACACCGAACATGCAAGGTATTATCATGGCGATAGGTAAATCCAGGAGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285681.6
CDS CAA 72 bp TCTTTATCATCTCCAGTGAGATCAATCACATCTTCCTaGCCCTTGCATCCTCGCATATCTTGTACCTCACAT +
Preference number: 6 (lower is better)
Translates to: SLSSPVRSITSS*PLHPRISCTSH
Trigger: ATGTGAGGTACAAGATATGCGAGGATGCAAGGGCAAGGAAGATGTGATTGATCTCACTGGAGATGATAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547201.5
ENST00000549362.1
CDS TCA 72 bp CTGTTTGATTCGGCCAAACTCAAGGCAATTGCTCTCTaGAGATCATCTTTATCATCTCCAGTGAGATCAATC +
Preference number: 6 (lower is better)
Translates to: LFDSAKLKAIAL*RSSLSSPVRSI
Trigger: GATTGATCTCACTGGAGATGATAAAGATGATCTTCAGAGAGCAATTGCCTTGAGTTTGGCCGAATCAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
ENST00000547201.5
ENST00000549362.1
CDS CCA 72 bp CATCATTTTAAGTTTCCTGAGGCCTCCCCAACCATGTaGAACTGTGAGTCAGTTAAACCTCTTTCCTTTATA +
Preference number: 6 (lower is better)
Translates to: HHFKFPEASPTM*NCESVKPLSFI
Trigger: TATAAAGGAAAGAGGTTTAACTGACTCACAGTTCCACATGGTTGGGGAGGCCTCAGGAAACTTAAAATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478932.1
CDS CAA 72 bp TACACTCCTGGATTTACCTATCGCCATGATAATACCTaGCATGTTCGGTGTCATCATGATCTCGTCATCATA +
Preference number: 6 (lower is better)
Translates to: YTPGFTYRHDNT*HVRCHHDLVII
Trigger: TATGATGACGAGATCATGATGACACCGAACATGCAAGGTATTATCATGGCGATAGGTAAATCCAGGAGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400183.7
ENST00000449491.1
CDS CAA 90 bp TCATCTTTATCATCTCCAGTGAGATCAATCACATCTTCCTTGCCCTaGCATCCTCGCATATCTTGTACCTCACATGGGTGTAAAAGAATA +
Preference number: 6 (lower is better)
Translates to: SSLSSPVRSITSSLP*HPRISCTSHGCKRI
Trigger: TATTCTTTTACACCCATGTGAGGTACAAGATATGCGAGGATGCAAGGGCAAGGAAGATGTGATTGATCTCACTGGAGATGATAAAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547201.5
ENST00000549362.1
CDS TCA 72 bp CAATTGCTCTCTGAAGATCATCTTTATCATCTCCAGTaGGATCAATCACATTTGTATCTGCTTGGCTTCCCA +
Preference number: 6 (lower is better)
Translates to: QLLSEDHLYHLQ*DQSHLYLLGFP
Trigger: TGGGAAGCCAAGCAGATACAAATGTGATTGATCTCACTGGAGATGATAAAGATGATCTTCAGAGAGCAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
CDS GCA 72 bp AAATCCGGTGGTAATGTTTCTATACCAACAAGGGGCTaGCCAGTTTCTTTATTAAACTCCTCTTGTATTAGG +
Preference number: 6 (lower is better)
Translates to: KSGGNVSIPTRG*PVSLLNSSCIR
Trigger: CCTAATACAAGAGGAGTTTAATAAAGAAACTGGGCAGCCCCTTGTTGGTATAGAAACATTACCACCGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000400183.7
CDS CCA 72 bp GCACTCATGCAGATCTTTGAACCCATTGACCTGAAGTaGGTACTGACCAAACATTTCAGTGTTTTCAAATTT +
Preference number: 6 (lower is better)
Translates to: ALMQIFEPIDLK*VLTKHFSVFKF
Trigger: AAATTTGAAAACACTGAAATGTTTGGTCAGTACCCACTTCAGGTCAATGGGTTCAAAGATCTGCATGAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000400183.7
CDS CAA 90 bp TCCTTAAGAATTTCAACTGCTCTTGATGGATCAACATACTTCCTTTaGGTACCAACAAGAAGTGCAAATAGATACCTCAGCTCACGCATA +
Preference number: 6 (lower is better)
Translates to: SLRISTALDGSTYFL*VPTRSANRYLSSRI
Trigger: TATGCGTGAGCTGAGGTATCTATTTGCACTTCTTGTTGGTACCAAAAGGAAGTATGTTGATCCATCAAGAGCAGTTGAAATTCTTAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
ENST00000464435.1
ENST00000547201.5
ENST00000549362.1
CDS CAA 90 bp AATGGCAAAAATGGGACAATAAACTCATTCATGATAATCAAACCATaGTTTACTTCTCGATCCTCTCCAGATTCGAAGAGTTCTGCGGCT +
Preference number: 6 (lower is better)
Translates to: NGKNGTINSFMIIKP*FTSRSSPDSKSSAA
Trigger: AGCCGCAGAACTCTTCGAATCTGGAGAGGATCGAGAAGTAAACAATGGTTTGATTATCATGAATGAGTTTATTGTCCCATTTTTGCCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
ENST00000478932.1
CDS TCA 72 bp AATATCGTCAACAGGAGAAGTGCAAACAGGTTTACTTaGGGCAAATTCCAATGCATACTGAAGAACATCTAC +
Preference number: 6 (lower is better)
Translates to: NIVNRRSANRFT*GKFQCILKNIY
Trigger: GTAGATGTTCTTCAGTATGCATTGGAATTTGCCTCAAGTAAACCTGTTTGCACTTCTCCTGTTGACGATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000400183.7
CDS TCA 72 bp GGAAAGATGGTTGTGCTATTAAGTCCAACTTGGCCATaGATCAATTACCCAATTGATATGGTTAGGCTTTGT +
Preference number: 6 (lower is better)
Translates to: GKMVVLLSPTWP*INYPIDMVRLC
Trigger: ACAAAGCCTAACCATATCAATTGGGTAATTGATTCATGGCCAAGTTGGACTTAATAGCACAACCATCTTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478932.1
CDS CCA 72 bp TTTCAACTGCTCTTGATGGATCAACATACTTCCTTTTaGTACCAACAAGAAGTGCAAATAGATACCTCAGCT +
Preference number: 6 (lower is better)
Translates to: FQLLLMDQHTSF*YQQEVQIDTSA
Trigger: AGCTGAGGTATCTATTTGCACTTCTTGTTGGTACCAAAAGGAAGTATGTTGATCCATCAAGAGCAGTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
ENST00000464435.1
ENST00000547201.5
ENST00000549362.1
CDS CAA 72 bp ATTTCAACTGCTCTTGATGGATCAACATACTTCCTTTaGGTACCAACAAGAAGTGCAAATAGATACCTCAGC +
Preference number: 6 (lower is better)
Translates to: ISTALDGSTYFL*VPTRSANRYLS
Trigger: GCTGAGGTATCTATTTGCACTTCTTGTTGGTACCAAAAGGAAGTATGTTGATCCATCAAGAGCAGTTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000351097.9
ENST00000400183.7
ENST00000464435.1
ENST00000547201.5
ENST00000549362.1
CDS GCA 72 bp TTTTTACAACTGTGTACTACTTATACTCAGAATCATTaGAACTGGCACAAGGAGGACATACTTCTGAGAAAA +
Preference number: 6 (lower is better)
Translates to: FLQLCTTYTQNH*NWHKEDILLRK
Trigger: TTTTCTCAGAAGTATGTCCTCCTTGTGCCAGTTGCAATGATTCTGAGTATAAGTAGTACACAGTTGTAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464435.1
CDS CCA 72 bp TGTCAGAGTACATTAATTCAATTGTTCGATGGATTCTaGATATGCTTTCCTGCAAATCTCTGGTGTCATTTT +
Preference number: 6 (lower is better)
Translates to: CQSTLIQLFDGF*ICFPANLWCHF
Trigger: AAAATGACACCAGAGATTTGCAGGAAAGCATATCCAGAATCCATCGAACAATTGAATTAATGTACTCTGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000400183.7
ENST00000453553.1
CDS CCA 72 bp ATAGATTTGTCAGAGTACATTAATTCAATTGTTCGATaGATTCTGGATATGCTTTCCTGCAAATCTCTGGTG +
Preference number: 6 (lower is better)
Translates to: IDLSEYINSIVR*ILDMLSCKSLV
Trigger: CACCAGAGATTTGCAGGAAAGCATATCCAGAATCCATCGAACAATTGAATTAATGTACTCTGACAAATCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000400183.7
ENST00000453553.1
CDS GCA 72 bp ATTTTGTCACAGCAATATCATTGTACTTCATCCATCTaGTTTCACGATGATCAAAAATATATGCCCAGTAGT +
Preference number: 6 (lower is better)
Translates to: ILSQQYHCTSSI*FHDDQKYMPSS
Trigger: ACTACTGGGCATATATTTTTGATCATCGTGAAAGCAGATGGATGAAGTACAATGATATTGCTGTGACAAAAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285679.10
ENST00000285681.6
ENST00000400183.7
ENST00000453553.1