RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP20 (Homo sapiens)

Ensembl gene IDs: ENSG00000136878

Ensembl transcript IDs: ENST00000315480.9, ENST00000358355.5, ENST00000372429.8, ENST00000472108.1, ENST00000474895.6, ENST00000491053.5, ENST00000491731.1, ENST00000494971.2, ENST00000496927.5

Found 724 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTaGGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGC +
Preference number: 1 (lower is better)
Translates to: QHRHGARSQPAQKPL*VATVQRAASGCSAG
Trigger: GCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR GCA 90 bp GGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTaGAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGAAGGCTG +
Preference number: 1 (lower is better)
Translates to: GPDPSLHRSLSASRQ*SVRPLAAAPAFRRL
Trigger: CAGCCTTCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR GCA 90 bp CAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTaGAGCGCCGGCTTTCAGAAGGCTGGGGCCAATGCCAGGGGAACC +
Preference number: 1 (lower is better)
Translates to: QKPLCVATVQRAASG*SAGFQKAGANARGT
Trigger: GGTTCCCCTGGCATTGGCCCCAGCCTTCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGAGGCTTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR GCA 90 bp GCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTaGTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAG +
Preference number: 1 (lower is better)
Translates to: APRPGGFSRGFGALL*SVAPSTQHPEAASQ
Trigger: CTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR GCA 90 bp TGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTaGTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTT +
Preference number: 1 (lower is better)
Translates to: WSHLALAVSPGALVP*CAQWLPPLSIQRLL
Trigger: AAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR GCA 90 bp GATGATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTaGCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGC +
Preference number: 1 (lower is better)
Translates to: DDGRTSPWRFLQGLW*LAVLSGSLHSASRG
Trigger: GCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACCATCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR CCA 90 bp GCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTaGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCAC +
Preference number: 1 (lower is better)
Translates to: ALAVSPGALVPCCAQ*LPPLSIQRLLPRIH
Trigger: GTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR CCA 90 bp CCACGCCCCGTCTGCTTTGATCCTGATGATGGTCGCACCTCGCCCTaGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGC +
Preference number: 1 (lower is better)
Translates to: PRPVCFDPDDGRTSP*RFLQGLWCLAVLSG
Trigger: GCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACCATCATCAGGATCAAAGCAGACGGGGCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR CCA 90 bp CCTGATGATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTaGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGA +
Preference number: 1 (lower is better)
Translates to: PDDGRTSPWRFLQGL*CLAVLSGSLHSASR
Trigger: TCTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACCATCATCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR GCA 90 bp TGGGGCCGGGCCATGTCCAGGGCCCTCCCACATCCTCCAGGAAGGTaGTTTCAGGGACCTGCTCTTTGGATGTTCAAAAGGACATGTGAG +
Preference number: 1 (lower is better)
Translates to: WGRAMSRALPHPPGR*FQGPALWMFKRTCE
Trigger: CTCACATGTCCTTTTGAACATCCAAAGAGCAGGTCCCTGAAAGCACCTTCCTGGAGGATGTGGGAGGGCCCTGGACATGGCCCGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315480.9
3UTR GCA 90 bp CTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGGCGGGGTTCTaGAGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCG +
Preference number: 1 (lower is better)
Translates to: LQTKPTFLPLYTAGF*SSPASLLGTNTPSA
Trigger: CGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCAGAACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR GCA 90 bp CTCCTCCTGGTGTTCCAATCAGCAATGAGTCCAGAGTCTTCAGTCTaGAGGAGAAGTGCTGAGAGCAGCCCGGGACTTCAGAGCCTTCCT +
Preference number: 1 (lower is better)
Translates to: LLLVFQSAMSPESSV*RRSAESSPGLQSLP
Trigger: AGGAAGGCTCTGAAGTCCCGGGCTGCTCTCAGCACTTCTCCTGCAGACTGAAGACTCTGGACTCATTGCTGATTGGAACACCAGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR TCA 90 bp GTTCCCTGGTGGGGGCTCAGCAAATTTCCCATGAAGATGAACTGCTaGACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGC +
Preference number: 1 (lower is better)
Translates to: VPWWGLSKFPMKMNC*TSRQITANPGGRLS
Trigger: GCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTTCAGCAGTTCATCTTCATGGGAAATTTGCTGAGCCCCCACCAGGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR TCA 90 bp AAGGTGCTTTCAGGGACCTGCTCTTTGGATGTTCAAAAGGACATGTaGGGGTCTCTGGAGAGTGAGGAGAGGACCCAGAGTGCCATGGAG +
Preference number: 1 (lower is better)
Translates to: KVLSGTCSLDVQKDM*GSLESEERTQSAME
Trigger: CTCCATGGCACTCTGGGTCCTCTCCTCACTCTCCAGAGACCCTCACATGTCCTTTTGAACATCCAAAGAGCAGGTCCCTGAAAGCACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315480.9
3UTR CCA 90 bp TCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATaGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGG +
Preference number: 1 (lower is better)
Translates to: SVFFSISSGSCLCLK*PSCEVSLFHHPVPW
Trigger: CCAGGGAACCGGATGATGAAACAGGGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR GCA 90 bp GGGAGGAAGGGAAAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTaGCTTTGCCTCAAATGGCCAAGCTGTGAGGTATCCCTGTTTCAT +
Preference number: 1 (lower is better)
Translates to: GRKGKSVFFSISSGS*LCLKWPSCEVSLFH
Trigger: ATGAAACAGGGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTTTCCCTTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR GCA 90 bp AAGGGAAAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTaGCTCAAATGGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCG +
Preference number: 1 (lower is better)
Translates to: KGKSVFFSISSGSCL*LKWPSCEVSLFHHP
Trigger: CGGATGATGAAACAGGGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTTTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR GCA 90 bp AGTCTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTaGAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACAC +
Preference number: 1 (lower is better)
Translates to: SLGRFNKPEVHIFSS*SVTANQTNFSASLH
Trigger: GTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR GCA 90 bp CGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTACACGGCGGGGTTCTaGAGCAGCCCGGCCTCTCTT +
Preference number: 2 (lower is better)
Translates to: RGSGPIAQWRRREAAATPYTAGF*SSPASL
Trigger: AAGAGAGGCCGGGCTGCTGCAGAACCCCGCCGTGTA...GGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR CCA 90 bp AGTCTTCGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTGGACCCAGAGTGCCATaGAGGGACCAGCCGGGGCGA +
Preference number: 2 (lower is better)
Translates to: SLRGSGPIAQWRRREAAAGPRVP*RDQPGR
Trigger: TCGCCCCGGCTGGTCCCTCCATGGCACTCTGGGTCC...AGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCGAAGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315480.9
3UTR-3UTR CCA 90 bp GTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCACAGCAGGACGCGGTGTaGGGGACCAGCTGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: VAPRPGGFSRGFGALLCSQQDAV*GTSCLQ
Trigger: CTGGAGGCAGCTGGTCCCCCACACCGCGTCCTGCTG...TGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR GCA 90 bp GCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTGGGGGACCGTGACGCCCAGGAGATaGAGAGGTGCGGCGGGACCA +
Preference number: 2 (lower is better)
Translates to: ANYSQSRGQAQQDAVWGTVTPRR*RGAAGP
Trigger: TGGTCCCGCCGCACCTCTGCATCTCCTGGGCGTCAC...GGTCCCCCACACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR GCA 90 bp CCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCTGAGCGCTGCACCCTaGACAGCCCCCACATCCCTC +
Preference number: 2 (lower is better)
Translates to: PRPGGFSRGFGALLCSVALSAAP*TAPTSL
Trigger: GAGGGATGTGGGGGCTGTGCAGGGTGCAGCGCTCAG...AGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR TCA 90 bp GGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCACAGTGGAGACGCCGTaGAGCAGCAGCTACTCCCTG +
Preference number: 2 (lower is better)
Translates to: GRTSPWRFLQGLWCLAVLTVETP*SSSYSL
Trigger: CAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGT...GAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR GCA 90 bp GCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGTACACGGCGGGGTTCTaGAGCAGCCCGGCCTCTCTT +
Preference number: 2 (lower is better)
Translates to: APRPGGFSRGFGALLCSVYTAGF*SSPASL
Trigger: AAGAGAGGCCGGGCTGCTGCAGAACCCCGCCGTGTA...CACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR GCA 90 bp TCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGATGGGCTCTGCACTGCTaGTGCTGGGAGGAAGGGAAA +
Preference number: 2 (lower is better)
Translates to: SASRQCSVRPLAAAPAFRWALHC*CWEEGK
Trigger: TTTCCCTTCCTCCCAGCAGCAGCAGTGCAGAGCCCA...TCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR GCA 90 bp TCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGATCTGCGGGACCCACCTaGTGGAATTTCCACCACCAC +
Preference number: 2 (lower is better)
Translates to: SASRQCSVRPLAAAPAFRSAGPT*WNFHHH
Trigger: GTGGTGGTGGAAATTCCAGCAGGTGGGTCCCGCAGA...TCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR CCA 90 bp CAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCCCGGCCTCTCTTCTaGGCACAAACACGCCTTCCG +
Preference number: 2 (lower is better)
Translates to: QTWGPIPACTEASLRRDSARPLF*AQTRLP
Trigger: CGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGC...ACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR CCA 90 bp GCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTGGGGGACCGCCCGGCCTCTCTTCTaGGCACAAACACGCCTTCCG +
Preference number: 2 (lower is better)
Translates to: ANYSQSRGQAQQDAVWGTARPLF*AQTRLP
Trigger: CGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGC...GGTCCCCCACACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR CCA 90 bp TGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGAAGCATCCGGTTCCCTGGTaGGGGCTCAGCAAATTTCCC +
Preference number: 2 (lower is better)
Translates to: CVATVQRAASGCSAGFQKHPVPW*GLSKFP
Trigger: GGGAAATTTGCTGAGCCCCCACCAGGGAACCGGATG...CTTCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR CCA 90 bp TGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGAAGAAAGACGCAGTAGTGTaGGGGGTCTGGTCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: CVATVQRAASGCSAGFQKKDAVV*GVWSQS
Trigger: GCTCTGGGACCAGACCCCCCACACTACTGCGTCTTT...CTTCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR GCA 90 bp CCCGTCTGCTTTGATCCTGATGATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGTGACGCCCAGGAGATaGAGAGGTGCGGCGGGACCA +
Preference number: 2 (lower is better)
Translates to: PVCFDPDDGRTSPWRFLQVTPRR*RGAAGP
Trigger: TGGTCCCGCCGCACCTCTGCATCTCCTGGGCGTCAC...CTGGAGAAACCGCCAGGGCGAGGTGCGACCATCATCAGGATCAAAGCAGACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR CCA 90 bp GGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAACGGGCACTCAGCAGTaGGGCCGGGCCATGTCCAGG +
Preference number: 2 (lower is better)
Translates to: GQAVRYPCFIIRFPGGGSTGTQQ*GRAMSR
Trigger: CCTGGACATGGCCCGGCCCCACTGCTGAGTGCCCGT...TGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCACAGCTTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315480.9
3UTR-3UTR TCA 90 bp AGACAGCACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCCTGCAGGAGAAGTGCTaGGAGCAGCCCGGGACTTCA +
Preference number: 2 (lower is better)
Translates to: RQHRHGARSQPAQKPLCVLQEKC*EQPGTS
Trigger: TGAAGTCCCGGGCTGCTCTCAGCACTTCTCCTGCAG...GACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGTGCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR GCA 90 bp CAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTTGGGCTCTGCACTGCTaGTGCTGGGAGGAAGGGAAA +
Preference number: 2 (lower is better)
Translates to: QTWGPIPACTEASLRRDSWALHC*CWEEGK
Trigger: TTTCCCTTCCTCCCAGCAGCAGCAGTGCAGAGCCCA...ACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR CCA 90 bp CCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGGGGCCAATCGCACAGTaGAGACGCCGTGAAGCAGCA +
Preference number: 2 (lower is better)
Translates to: PGALVPCCAQWLPPLSIQGPIAQ*RRREAA
Trigger: TGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCC...CTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR CCA 90 bp AGACAGCACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGGGACCCACCTGCTaGAATTTCCACCACCACCTG +
Preference number: 2 (lower is better)
Translates to: RQHRHGARSQPAQKPLCVAGPTC*NFHHHL
Trigger: CAGGTGGTGGTGGAAATTCCAGCAGGTGGGTCCCGC...GACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGTGCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR TCA 90 bp CCCGTCTGCTTTGATCCTGATGATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGCTGCAGGAGAAGTGCTaGGAGCAGCCCGGGACTTCA +
Preference number: 2 (lower is better)
Translates to: PVCFDPDDGRTSPWRFLQLQEKC*EQPGTS
Trigger: TGAAGTCCCGGGCTGCTCTCAGCACTTCTCCTGCAG...CTGGAGAAACCGCCAGGGCGAGGTGCGACCATCATCAGGATCAAAGCAGACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR GCA 90 bp CCCGTCTGCTTTGATCCTGATGATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGTGTGGGGGACCAGCTaGCTCCAGAAACATCCCCCA +
Preference number: 2 (lower is better)
Translates to: PVCFDPDDGRTSPWRFLQVWGTS*LQKHPP
Trigger: TGGGGGATGTTTCTGGAGGCAGCTGGTCCCCCACAC...CTGGAGAAACCGCCAGGGCGAGGTGCGACCATCATCAGGATCAAAGCAGACGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR CCA 90 bp GTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCCTCCAGGGACAAAGCTaGGCCGAGCTAGCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: VLSGSLHSASRGCFPGSTLQGQS*AELARG
Trigger: TCCTCTTGCTAGCTCGGCCCAGCTTTGTCCCTGGAG...GGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR CCA 90 bp CCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGCATCCGGTTCCCTGGTaGGGGCTCAGCAAATTTCCC +
Preference number: 2 (lower is better)
Translates to: PGALVPCCAQWLPPLSIQHPVPW*GLSKFP
Trigger: GGGAAATTTGCTGAGCCCCCACCAGGGAACCGGATG...CTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR TCA 90 bp TTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTACAGTGGAGACGCCGTaGAGCAGCAGCTACTCCCTG +
Preference number: 2 (lower is better)
Translates to: LVPCCAQWLPPLSIQRLLTVETP*SSSYSL
Trigger: CAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGT...AAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR GCA 90 bp GGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCCCAAACCAACTTTTCTaGCTCTTTACACGGCGGGGT +
Preference number: 2 (lower is better)
Translates to: GRTSPWRFLQGLWCLAVLPNQLF*LFTRRG
Trigger: ACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGG...GAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR GCA 90 bp GTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCATCGGGAAGCTGCCTTTaGCTCAAATGGCCAAGCTGT +
Preference number: 2 (lower is better)
Translates to: VAPRPGGFSRGFGALLCSSGSCL*LKWPSC
Trigger: ACAGCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGA...TGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR GCA 90 bp GTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAATCAGCTCGGGAAGCTaGCTTTGCCTCAAATGGCCA +
Preference number: 2 (lower is better)
Translates to: VAPRPGGFSRGFGALLCSISSGS*LCLKWP
Trigger: TGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGAT...TGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR CCA 90 bp CCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTACATGTGAGGGTCTCTaGAGAGTGAGGAGAGGACCC +
Preference number: 2 (lower is better)
Translates to: PGQSHSGDAVKQQLLPDSTCEGL*RVRRGP
Trigger: GGGTCCTCTCCTCACTCTCCAGAGACCCTCACATGT...AGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315480.9
3UTR-3UTR CCA 90 bp TTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTGGGCCAATCGCACAGTaGAGACGCCGTGAAGCAGCA +
Preference number: 2 (lower is better)
Translates to: LVPCCAQWLPPLSIQRLLGPIAQ*RRREAA
Trigger: TGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCC...AAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR TCA 90 bp AGTCTTCGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTGTTCAAAAGGACATGTaGGGGTCTCTGGAGAGTGAG +
Preference number: 2 (lower is better)
Translates to: SLRGSGPIAQWRRREAAAVQKDM*GSLESE
Trigger: CTCACTCTCCAGAGACCCTCACATGTCCTTTTGAAC...AGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCGAAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315480.9
3UTR-3UTR GCA 90 bp AGTCTTCGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTCCAAACCAACTTTTCTaGCTCTTTACACGGCGGGGT +
Preference number: 2 (lower is better)
Translates to: SLRGSGPIAQWRRREAAAPNQLF*LFTRRG
Trigger: ACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGG...AGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCGAAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR GCA 90 bp CCCGTCTGCTTTGATCCTGATGATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGCCAGAGTCTTCAGTCTaGAGGAGAAGTGCTGAGAGC +
Preference number: 2 (lower is better)
Translates to: PVCFDPDDGRTSPWRFLQPESSV*RRSAES
Trigger: GCTCTCAGCACTTCTCCTGCAGACTGAAGACTCTGG...CTGGAGAAACCGCCAGGGCGAGGTGCGACCATCATCAGGATCAAAGCAGACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR CCA 90 bp GTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTGCCTTTGCCTCAAATaGCCAAGCTGTGAGGTATCC +
Preference number: 2 (lower is better)
Translates to: VLSGSLHSASRGCFPGSTCLCLK*PSCEVS
Trigger: GGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCA...GGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR TCA 90 bp CCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGCAAATGGCCAAGCTGTaGGGTATCCCTGTTTCATCA +
Preference number: 2 (lower is better)
Translates to: PGALVPCCAQWLPPLSIQQMAKL*GIPVSS
Trigger: TGATGAAACAGGGATACCTCACAGCTTGGCCATTTG...CTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR GCA 90 bp TTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTATCAGCTCGGGAAGCTaGCTTTGCCTCAAATGGCCA +
Preference number: 2 (lower is better)
Translates to: LVPCCAQWLPPLSIQRLLISSGS*LCLKWP
Trigger: TGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGAT...AAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR CCA 90 bp GCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAACGGGCACATGGGGCTGTaGGGACACGGGCACTCAGCA +
Preference number: 2 (lower is better)
Translates to: ALPGQRPKLTSQSLGRFNGHMGL*GHGHSA
Trigger: TGCTGAGTGCCCGTGTCCCCACAGCCCCATGTGCCC...GTTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315480.9
3UTR-3UTR GCA 90 bp GTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAGCAAATTTCCATCCTCCAGGAAGGTaGTTTCAGGGACCTGCTCTT +
Preference number: 2 (lower is better)
Translates to: VRYPCFIIRFPGGGSANFHPPGR*FQGPAL
Trigger: AAGAGCAGGTCCCTGAAAGCACCTTCCTGGAGGATG...GAAATTTGCTGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315480.9
3UTR-3UTR CCA 90 bp GCTGCCTTTGCCTCAAATGGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGCAGGGACCTGCTCTTTaGATGTTCAAAAGGACATGT +
Preference number: 2 (lower is better)
Translates to: AAFASNGQAVRYPCFIIRQGPAL*MFKRTC
Trigger: ACATGTCCTTTTGAACATCCAAAGAGCAGGTCCCTG...CCGGATGATGAAACAGGGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315480.9
3UTR-3UTR TCA 90 bp GTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAGCAAATTTCATGAAGATGAACTGCTaGACTTCGAGGCAAATTACA +
Preference number: 2 (lower is better)
Translates to: VRYPCFIIRFPGGGSANFMKMNC*TSRQIT
Trigger: TGTAATTTGCCTCGAAGTTCAGCAGTTCATCTTCAT...GAAATTTGCTGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR GCA 90 bp AAGTGCATATATTTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGTACACGGCGGGGTTCTaGAGCAGCCCGGCCTCTCTT +
Preference number: 2 (lower is better)
Translates to: KCIYFLVAALLQTKPTFLYTAGF*SSPASL
Trigger: AAGAGAGGCCGGGCTGCTGCAGAACCCCGCCGTGTA...CAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAAATATATGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR GCA 90 bp GCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAACGTGCTTTCAGGGACCTaGTCTTTGGATGTTCAAAAG +
Preference number: 2 (lower is better)
Translates to: ALPGQRPKLTSQSLGRFNVLSGT*SLDVQK
Trigger: CTTTTGAACATCCAAAGAGCAGGTCCCTGAAAGCAC...GTTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315480.9
3UTR GCA 72 bp CTCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTaGAGCGCCGGCTTTCAGAAGGCTGGGGCCAATGCC +
Preference number: 3 (lower is better)
Translates to: LCVATVQRAASG*SAGFQKAGANA
Trigger: GGCATTGGCCCCAGCCTTCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR GCA 72 bp CCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTaGAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTC +
Preference number: 3 (lower is better)
Translates to: PSLHRSLSASRQ*SVRPLAAAPAF
Trigger: GAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR GCA 72 bp CATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTaGGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: HGARSQPAQKPL*VATVQRAASGC
Trigger: GCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR CCA 72 bp TGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGAAGGCTaGGGCCAATGCCAGGGGAACCCCAGGCTCAGCAGG +
Preference number: 3 (lower is better)
Translates to: CGLWLQRRLSEG*GQCQGNPRLSR
Trigger: CCTGCTGAGCCTGGGGTTCCCCTGGCATTGGCCCCAGCCTTCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR TCA 72 bp TCGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTaGAGCAGCAGCTACTCCCTGACTCTGGCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: SGLRANRTVETP*SSSYSLTLAQA
Trigger: GGCCTGGGCCAGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR GCA 72 bp CGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTaGCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCA +
Preference number: 3 (lower is better)
Translates to: RTSPWRFLQGLW*LAVLSGSLHSA
Trigger: TGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR CCA 72 bp GGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTaGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCA +
Preference number: 3 (lower is better)
Translates to: GRTSPWRFLQGL*CLAVLSGSLHS
Trigger: TGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR CAA 90 bp ACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGAGGGGCTTTGGTGCCTaGCTGTGCTCAGTGGCTCCC +
Preference number: 3 (lower is better)
Translates to: TDMGPDPSLHRSLSASRQRGFGA*LCSVAP
Trigger: GGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCT...CTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR CAA 90 bp TCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGTTTCTCCAGGGGCTTaGGTGCCTTGCTGTGCTCAG +
Preference number: 3 (lower is better)
Translates to: SLRRDSAACGLWLQRRLSVSPGA*VPCCAQ
Trigger: CTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAAC...TGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR CAA 90 bp GGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTCACGCCCCGTCTGCTTaGATCCTGATGATGGTCGCA +
Preference number: 3 (lower is better)
Translates to: GARSQPAQKPLCVATVQRHAPSA*ILMMVA
Trigger: TGCGACCATCATCAGGATCAAAGCAGACGGGGCGTG...ACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR CAA 90 bp GATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTCGGGAAGCTGCCTTaGCCTCAAATGGCCAAGCTG +
Preference number: 3 (lower is better)
Translates to: DPSLHRSLSASRQCSVRPLGKLP*PQMAKL
Trigger: CAGCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGAG...AGGCCGCACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR CCA 72 bp TCTGACAGGGGTAGCATCGGGCTCCAGGGACAAAGCTaGGCCGAGCTAGCAAGAGGACAGTTGTGGGGGACA +
Preference number: 3 (lower is better)
Translates to: SDRGSIGLQGQS*AELARGQLWGT
Trigger: TGTCCCCCACAACTGTCCTCTTGCTAGCTCGGCCCAGCTTTGTCCCTGGAGCCCGATGCTACCCCTGTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR CCA 72 bp GTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTaGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCC +
Preference number: 3 (lower is better)
Translates to: VSPGALVPCCAQ*LPPLSIQRLLP
Trigger: GGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR CCA 72 bp GTCTGCTTTGATCCTGATGATGGTCGCACCTCGCCCTaGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTG +
Preference number: 3 (lower is better)
Translates to: VCFDPDDGRTSP*RFLQGLWCLAV
Trigger: CACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACCATCATCAGGATCAAAGCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR GCA 72 bp AAACCAACTTTTCTGCCTCTTTACACGGCGGGGTTCTaGAGCAGCCCGGCCTCTCTTCTGGGCACAAACACG +
Preference number: 3 (lower is better)
Translates to: KPTFLPLYTAGF*SSPASLLGTNT
Trigger: CGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCAGAACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR CCA 72 bp TGTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTaGGGGCTCAGCAAATTTCCCATGAAGATGAACTGC +
Preference number: 3 (lower is better)
Translates to: CEVSLFHHPVPW*GLSKFPMKMNC
Trigger: GCAGTTCATCTTCATGGGAAATTTGCTGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR CCA 72 bp AGCTGTGAGGTATCCCTGTTTCATCATCCGGTTCCCTaGTGGGGGCTCAGCAAATTTCCCATGAAGATGAAC +
Preference number: 3 (lower is better)
Translates to: SCEVSLFHHPVP*WGLSKFPMKMN
Trigger: GTTCATCTTCATGGGAAATTTGCTGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCACAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR CCA 72 bp TTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATaGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCG +
Preference number: 3 (lower is better)
Translates to: FSISSGSCLCLK*PSCEVSLFHHP
Trigger: CGGATGATGAAACAGGGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR-3UTR CAA 90 bp TCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCAAGCTCAGGGACCTGCTCTTaGGATGTTCAAAAGGACATG +
Preference number: 3 (lower is better)
Translates to: SVFFSISSGSCLCLKWPSSGTCS*DVQKDM
Trigger: CATGTCCTTTTGAACATCCAAAGAGCAGGTCCCTGA...GCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315480.9
3UTR GCA 72 bp TCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTaGCTCAAATGGCCAAGCTGTGAGGTATCCCTGTTT +
Preference number: 3 (lower is better)
Translates to: SVFFSISSGSCL*LKWPSCEVSLF
Trigger: AAACAGGGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
3UTR GCA 72 bp CGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTaGAGCGTTACTGCAAACCAAACCAACTTTTCTGCC +
Preference number: 3 (lower is better)
Translates to: RFNKPEVHIFSS*SVTANQTNFSA
Trigger: GGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TGCAGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCGCGTCCGGCAGGGGCTaGAGGACCGTGGTGACGGGG +
Preference number: 4 (lower is better)
Translates to: CSSPASLLGTNTPSAGWGASGRG*RTVVTG
Trigger: CCCCGTCACCACGGTCCTCCAGCCCCTGCCGGACGC...GCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACAAGCTCCGTCTCGGCCTaGGAGCTGCCCCCGCCACGC +
Preference number: 4 (lower is better)
Translates to: SSPASLLGTNTPSAGWGTSSVSA*ELPPPR
Trigger: GCGTGGCGGGGGCAGCTCGCAGGCCGAGACGGAGCT...TGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCACGCGACAGTGCAGCGTaGGGCCTCTGGCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: SLRRDSAACGLWLQRRLSRDSAA*GLWLQR
Trigger: GCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCG...TGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GACTCTGGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGTCTGGGCCCAGCGGCTaGGCCACACTCTGGCGGATG +
Preference number: 4 (lower is better)
Translates to: DSGPGRSLCLTGVASGSRSGPSG*ATLWRM
Trigger: CATCCGCCAGAGTGTGGCGCAGCCGCTGGGCCCAGA...CCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCCAGAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTGCGTCCGGCAGGGGCTaGAGGACCGTGGTGACGGGG +
Preference number: 4 (lower is better)
Translates to: PRPGGFSRGFGALLCSVAASGRG*RTVVTG
Trigger: CCCCGTCACCACGGTCCTCCAGCCCCTGCCGGACGC...AGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTACTGGCCAGGGCTTCTaGCTGCGCTCACCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GARSQPAQKPLCVATVQRTGQGF*LRSPAL
Trigger: CAGGGCCGGTGAGCGCAGCCAGAAGCCCTGGCCAGT...ACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp CGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCCCACCACCGGCTCCTTaGGCTCCTCGTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RGSGPIAQWRRREAAATPPPPAP*APRAAG
Trigger: ACCAGCTGCACGAGGAGCTCAAGGAGCCGGTGGTGG...GGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACATGGAAGGTCTGGTTGGTaGTGGGGCCTGGCTCCGCGA +
Preference number: 4 (lower is better)
Translates to: AARPLFWAQTRLPRGGAHGRSGW*WGLAPR
Trigger: TCGCGGAGCCAGGCCCCATCACCAACCAGACCTTCC...ATGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GTTCTGCAGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGCCAGGGACACCACCTaGTGTCGCTCCCGCATGGCC +
Preference number: 4 (lower is better)
Translates to: VLQQPGLSSGHKHAFRGVARDTT*CRSRMA
Trigger: GGCCATGCGGGAGCGACAGCAGGTGGTGTCCCTGGC...CACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCAGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGTGACGCCCAGGAGATaGAGAGGTGCGGCGGGACCA +
Preference number: 4 (lower is better)
Translates to: SLRRDSAACGLWLQRRLSVTPRR*RGAAGP
Trigger: TGGTCCCGCCGCACCTCTGCATCTCCTGGGCGTCAC...TGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCATCAGCGGCGGGCAATTaGACAGGGCCTGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SLRRDSAACGLWLQRRLSSAAGN*TGPAGQ
Trigger: CTGCCCTGCAGGCCCTGTCCAATTGCCCGCCGCTGA...TGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTGAGCGCTGCGTCCGGCAGGGGCTaGAGGACCGTGGTGACGGGG +
Preference number: 4 (lower is better)
Translates to: WLPPLSIQRLLPRIHLSAASGRG*RTVVTG
Trigger: CCCCGTCACCACGGTCCTCCAGCCCCTGCCGGACGC...AGCGCTCAGGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACGCATGGCCCTCGTGGTaGTGGACGGGGCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: APGQSHSGDAVKQQLLPDAWPSW*WTGLQG
Trigger: CCCCTGCAGCCCCGTCCACCACCACGAGGGCCATGC...GTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GACTCTGGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGCTGCCTGCCGTGCCGTaGTGGCAGATGACCGAGAGG +
Preference number: 4 (lower is better)
Translates to: DSGPGRSLCLTGVASGSRLPAVP*WQMTER
Trigger: CCTCTCGGTCATCTGCCACCACGGCACGGCAGGCAG...CCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCCAGAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGAAGGCTGTCGCTCCCGCATaGCCTCCTCGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: CVATVQRAASGCSAGFQKAVAPA*PPRCSS
Trigger: GGAAGAGCAGCGAGGAGGCCATGCGGGAGCGACAGC...CTTCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGGGCTGGGCTCCCGCATaGCGGCCAGGGACACCACCT +
Preference number: 4 (lower is better)
Translates to: TDMGPDPSLHRSLSASRQGWAPA*RPGTPP
Trigger: AGGTGGTGTCCCTGGCCGCCATGCGGGAGCCCAGCC...CTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTGGGGGACCGGCTGGGCTCCCGCATaGCGGCCAGGGACACCACCT +
Preference number: 4 (lower is better)
Translates to: ANYSQSRGQAQQDAVWGTGWAPA*RPGTPP
Trigger: AGGTGGTGTCCCTGGCCGCCATGCGGGAGCCCAGCC...GGTCCCCCACACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGAACCGCAGCAGGCTaGGCTCCCGCATGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GRTSPWRFLQGLWCLAVLRTAAG*APAWRP
Trigger: TGGCCGCCATGCGGGAGCCCAGCCTGCTGCGGTTCT...GAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTGGCCCAGGCCGCAGCACGGGCACTCAGCAGTaGGGCCGGGCCATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SGDAVKQQLLPDSGPGRSTGTQQ*GRAMSR
Trigger: CCTGGACATGGCCCGGCCCCACTGCTGAGTGCCCGT...GCTGCGGCCTGGGCCAGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315480.9
CDS-3UTR CCA 90 bp GTTCTGCAGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGACTGGCCAGGGCTTCTaGCTGCGCTCACCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: VLQQPGLSSGHKHAFRGVTGQGF*LRSPAL
Trigger: CAGGGCCGGTGAGCGCAGCCAGAAGCCCTGGCCAGT...CACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCAGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GACTCTGGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGGGTCGCACCTCGCCCTaGCGGTTTCTCCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: DSGPGRSLCLTGVASGSRGRTSP*RFLQGL
Trigger: AAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACC...CCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCCAGAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GACTCTGGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGCACAGAAGCAGCCGGTaGCGGCCCGGAACTCACCTG +
Preference number: 4 (lower is better)
Translates to: DSGPGRSLCLTGVASGSRHRSSR*RPGTHL
Trigger: CAGGTGAGTTCCGGGCCGCCACCGGCTGCTTCTGTG...CCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCCAGAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358355.5
CDS-3UTR TCA 90 bp TCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGGCAGTCTTCCAGGGTaGCGACAGGCCCCCAAAACC +
Preference number: 4 (lower is better)
Translates to: SLRRDSAACGLWLQRRLSGSLPG*RQAPKT
Trigger: GGTTTTGGGGGCCTGTCGTCACCCTGGAAGACTGCC...TGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp AGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACATGCCGTGGTGGCAGATaGCCGAGAGGAGGTCGTAGG +
Preference number: 4 (lower is better)
Translates to: SSPASLLGTNTPSAGWGTCRGGR*PRGGRR
Trigger: CCTACGACCTCCTCTCGGTCATCTGCCACCACGGCA...TGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp TGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGAAGCGTTGTCCTTCCCCTTaGCGAACGCCTCCCACTCCC +
Preference number: 4 (lower is better)
Translates to: CVATVQRAASGCSAGFQKRCPSP*RTPPTP
Trigger: GGGAGTGGGAGGCGTTCGTCAAGGGGAAGGACAACG...CTTCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCACCAGGGAGGACCTGTaGGCTCCTCACTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GRTSPWRFLQGLWCLAVLTREDL*APHWPG
Trigger: CCCTGGCCAGTGAGGAGCTCACAGGTCCTCCCTGGT...GAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp ATCGGGCTCCAGGGACAAAGCTGGGCCGAGCTAGCAAGAGGACAGTTGTGGGGGGCCTGCACTCGCAACTaGGCCGCCGCCGCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: IGLQGQSWAELARGQLWGACTRN*AAAACQ
Trigger: CTGACAGGCGGCGGCGGCGCAGTTGCGAGTGCAGGC...CCCCCACAACTGTCCTCTTGCTAGCTCGGCCCAGCTTTGTCCCTGGAGCCCGAT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000315480.9
ENST00000372429.8
CDS-3UTR GCA 90 bp AGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACAGTAGTGCCCACTGCCTaGCGTGCCGTGGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: SSPASLLGTNTPSAGWGTVVPTA*RAVVAD
Trigger: ATCTGCCACCACGGCACGGCAGGCAGTGGGCACTAC...TGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCCCTGCGCTTGGCCAGTaGCTCGATCTCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: RGSGPIAQWRRREAAATPPALGQ*LDLHLA
Trigger: TGCCAGGTGGAGATCGAGGCACTGGCCAAGCGCAGG...GGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTGGCCCAGGCCGCAGCGTGACGCCCAGGAGATaGAGAGGTGCGGCGGGACCA +
Preference number: 4 (lower is better)
Translates to: SGDAVKQQLLPDSGPGRSVTPRR*RGAAGP
Trigger: TGGTCCCGCCGCACCTCTGCATCTCCTGGGCGTCAC...GCTGCGGCCTGGGCCAGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGGCCTCAGGGCCTCTaGGGGACCCACCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GRTSPWRFLQGLWCLAVLRPQGL*GTHLLE
Trigger: TTCCAGCAGGTGGGTCCCGCAGAGGCCCTGAGGCCT...GAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AGACAGCACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCCGCGACAGTGCAGCGTaGGGCCTCTGGCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: RQHRHGARSQPAQKPLCVRDSAA*GLWLQR
Trigger: GCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCG...GACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGTGCTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTGGCCCAGGCCGCAGCTCTGCGTCGCGACAGTaGAGCGTGCGGCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SGDAVKQQLLPDSGPGRSSASRQ*SVRPLA
Trigger: AGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGA...GCTGCGGCCTGGGCCAGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGAGGGGTCTGGAGTGAGTaGAGGCCTCTGGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SASRQCSVRPLAAAPAFRGVWSE*RPLARS
Trigger: GCTCCTTGCCAGAGGCCTCCACTCACTCCAGACCCC...TCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCGGGGTCTGGAGTGAGTaGAGGCCTCTGGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: RGSGPIAQWRRREAAATPGVWSE*RPLARS
Trigger: GCTCCTTGCCAGAGGCCTCCACTCACTCCAGACCCC...GGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACATCCCCCATCCTGGCCTaGGCTCACCTCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: SSPASLLGTNTPSAGWGTSPILA*AHLWVT
Trigger: TGTCACCCAGAGGTGAGCCCAGGCCAGGATGGGGGA...TGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACATCAGAGGGTGGGAGGGTaGCGGGGAGTCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: AARPLFWAQTRLPRGGAHQRVGG*RGVLFR
Trigger: TCTGAACAGGACTCCCCGCCACCCTCCCACCCTCTG...ATGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACATTCGGCCCGCCTCATCTaGGATCAGCAGCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: AARPLFWAQTRLPRGGAHSARLI*DQQLRL
Trigger: GAGACGGAGCTGCTGATCCCAGATGAGGCGGGCCGA...ATGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGAAGTCGGCCCGCCTCATCTaGGATCAGCAGCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: CVATVQRAASGCSAGFQKSARLI*DQQLRL
Trigger: GAGACGGAGCTGCTGATCCCAGATGAGGCGGGCCGA...CTTCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCATCATTGTCCGGCTCTaGCGTCCGGCAGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RGSGPIAQWRRREAAATPIIVRL*RPAGAG
Trigger: TCCAGCCCCTGCCGGACGCCAGAGCCGGACAATGAT...GGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTGGCCCAGGCCGCAGCTTGGCATGGCCCTCGTaGTGGTGGACGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SGDAVKQQLLPDSGPGRSLAWPS*WWTGLQ
Trigger: CTGCAGCCCCGTCCACCACCACGAGGGCCATGCCAA...GCTGCGGCCTGGGCCAGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GTTCTGCAGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGCCTGCCGTGCCGTGGTaGCAGATGACCGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VLQQPGLSSGHKHAFRGVPAVPW*QMTERR
Trigger: CCTCCTCTCGGTCATCTGCCACCACGGCACGGCAGG...CACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCAGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGAGAACCGCAGCAGGCTaGGCTCCCGCATGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: APRPGGFSRGFGALLCSVRTAAG*APAWRP
Trigger: TGGCCGCCATGCGGGAGCCCAGCCTGCTGCGGTTCT...CACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTGAGCACACGTACAGGTaGTTCACGGCGGGGCCACCC +
Preference number: 4 (lower is better)
Translates to: DPSLHRSLSASRQCSVRPEHTYR*FTAGPP
Trigger: GGGTGGCCCCGCCGTGAACCACCTGTACGTGTGCTC...AGGCCGCACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGCCCGGCCTCTCTTCTaGGCACAAACACGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: SLRRDSAACGLWLQRRLSARPLF*AQTRLP
Trigger: CGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGC...TGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCGCAGCGTGCGGCCTCTaGCTGCAGCGCCGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: MVAPRPGGFSRGFGALLCAACGL*LQRRLS
Trigger: TGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGC...GCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGTCTTCGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTGCAGCGTGCGGCCTCTaGCTGCAGCGCCGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: SLRGSGPIAQWRRREAAAAACGL*LQRRLS
Trigger: TGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGC...AGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCGAAGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGTCTTCGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTAGCCCGGAGCCGGGCTaGGGTCGCCAATGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SLRGSGPIAQWRRREAAASPEPG*GRQCSE
Trigger: CTCTGAGCATTGGCGACCCCAGCCCGGCTCCGGGCT...AGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCGAAGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358355.5
CDS-3UTR TCA 90 bp GTTCTGCAGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGCAGTCTTCCAGGGTaGCGACAGGCCCCCAAAACC +
Preference number: 4 (lower is better)
Translates to: VLQQPGLSSGHKHAFRGVGSLPG*RQAPKT
Trigger: GGTTTTGGGGGCCTGTCGTCACCCTGGAAGACTGCC...CACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCAGAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp CAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGGAAGGTCTGGTTGGTaGTGGGGCCTGGCTCCGCGA +
Preference number: 4 (lower is better)
Translates to: QTWGPIPACTEASLRRDSGRSGW*WGLAPR
Trigger: TCGCGGAGCCAGGCCCCATCACCAACCAGACCTTCC...ACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp CCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTGGAAGGTCTGGTTGGTaGTGGGGCCTGGCTCCGCGA +
Preference number: 4 (lower is better)
Translates to: PRPGGFSRGFGALLCSVAGRSGW*WGLAPR
Trigger: TCGCGGAGCCAGGCCCCATCACCAACCAGACCTTCC...AGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp CACGGGCACTCAGCAGTGGGGCCGGGCCATGTCCAGGGCCCTCCCACATCCTCCCATGGCCGCTTCCTTTaGCCTGTGCAATCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: HGHSAVGPGHVQGPPTSSHGRFL*PVQSCC
Trigger: ACAGCAGGATTGCACAGGTCAAAGGAAGCGGCCATG...GGAGGATGTGGGAGGGCCCTGGACATGGCCCGGCCCCACTGCTGAGTGCCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315480.9
CDS-3UTR TCA 90 bp AGTCTTCGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACCAGGGAGGACCTGTaGGCTCCTCACTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLRGSGPIAQWRRREAAATREDL*APHWPG
Trigger: CCCTGGCCAGTGAGGAGCTCACAGGTCCTCCCTGGT...AGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCGAAGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GTTCTGCAGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGGCTGCCAGCCGCTaGTCCAGGAATACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VLQQPGLSSGHKHAFRGVGAASR*SRNTSF
Trigger: GAAGGAGGTATTCCTGGAGCAGCGGCTGGCAGCCCC...CACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCAGAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CCCGTCTGCTTTGATCCTGATGATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGTGGTGGACGGGGCTaGAGGGGCGAGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PVCFDPDDGRTSPWRFLQGGGRG*RGERSC
Trigger: GCAGCTCCTCTCGCCCCTGCAGCCCCGTCCACCACC...CTGGAGAAACCGCCAGGGCGAGGTGCGACCATCATCAGGATCAAAGCAGACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGGCCAGGGACACCACCTaGTGTCGCTCCCGCATGGCC +
Preference number: 4 (lower is better)
Translates to: PGALVPCCAQWLPPLSIQARDTT*CRSRMA
Trigger: GGCCATGCGGGAGCGACAGCAGGTGGTGTCCCTGGC...CTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCACGATCTCGATCCTCCTaGGCTTGGCCAGTGCCTCGA +
Preference number: 4 (lower is better)
Translates to: SLRRDSAACGLWLQRRLSRSRSS*AWPVPR
Trigger: TCGAGGCACTGGCCAAGCGCAGGAGGATCGAGATCG...TGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GACTCTGGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGATCTTCTGCTCCCCGTaGAGGTTCTCTGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: DSGPGRSLCLTGVASGSRIFCSP*RFSGPS
Trigger: GCTGGGCCCAGAGAACCTGCACGGGGAGCAGAAGAT...CCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCCAGAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTGGCCCAGGCCGCAGCTACACGGCGGGGTTCTaGAGCAGCCCGGCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SGDAVKQQLLPDSGPGRSYTAGF*SSPASL
Trigger: AAGAGAGGCCGGGCTGCTGCAGAACCCCGCCGTGTA...GCTGCGGCCTGGGCCAGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTCGTGCGGCCTCTGGCTaGAGCGCCGGCTTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: QTWGPIPACTEASLRRDSRAASG*SAGFQK
Trigger: CTTCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACG...ACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp ATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCTGCGTCGCGACAGTaGAGCGTGCGGCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: MVAPRPGGFSRGFGALLCSASRQ*SVRPLA
Trigger: AGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGA...GCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GACTCTGGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGCGGGCTATAGGGGTCTaGAGTGAGTGGAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: DSGPGRSLCLTGVASGSRRAIGV*SEWRPL
Trigger: CAGAGGCCTCCACTCACTCCAGACCCCTATAGCCCG...CCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCCAGAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTGGGGGACCTCAGCGGCGGGCAATTaGACAGGGCCTGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ANYSQSRGQAQQDAVWGTSAAGN*TGPAGQ
Trigger: CTGCCCTGCAGGCCCTGTCCAATTGCCCGCCGCTGA...GGTCCCCCACACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TGCAGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCCATGAGACAGACTGGTaGGGACCACGTAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: CSSPASLLGTNTPSAGWGHETDW*GPRSLA
Trigger: GGCCAAGCTACGTGGTCCCCACCAGTCTGTCTCATG...GCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTAGCTCCTCGTGCAGCTaGTCCATCAGGCAGCGAAGG +
Preference number: 4 (lower is better)
Translates to: GARSQPAQKPLCVATVQRSSSCS*SIRQRR
Trigger: CCTTCGCTGCCTGATGGACCAGCTGCACGAGGAGCT...ACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTTGGGCCTCCGCGGGCTaGTCGTCAAGGGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: PGQSHSGDAVKQQLLPDSWASAG*SSRAAM
Trigger: CATGGCTGCCCTTGACGACCAGCCCGCGGAGGCCCA...AGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTGGGCCTCCGCGGGCTaGTCGTCAAGGGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: VLSGSLHSASRGCFPGSTWASAG*SSRAAM
Trigger: CATGGCTGCCCTTGACGACCAGCCCGCGGAGGCCCA...GGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGAGGGATGTGCACTCCTTaGCAAGGAAGGGGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: SASRQCSVRPLAAAPAFRGMCTP*QGRGAG
Trigger: ACCTGCGCCCCTTCCTTGCCAAGGAGTGCACATCCC...TCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACAGGGATGTGCACTCCTTaGCAAGGAAGGGGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: SSPASLLGTNTPSAGWGTGMCTP*QGRGAG
Trigger: ACCTGCGCCCCTTCCTTGCCAAGGAGTGCACATCCC...TGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGAGAGCAGAGGAAGGTCTaGTTGGTGATGGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SASRQCSVRPLAAAPAFREQRKV*LVMGPG
Trigger: GCCAGGCCCCATCACCAACCAGACCTTCCTCTGCTC...TCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTGAGCAGAGGAAGGTCTaGTTGGTGATGGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GARSQPAQKPLCVATVQREQRKV*LVMGPG
Trigger: GCCAGGCCCCATCACCAACCAGACCTTCCTCTGCTC...ACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGTCTTCGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTGAGCACACGTACAGGTaGTTCACGGCGGGGCCACCC +
Preference number: 4 (lower is better)
Translates to: SLRGSGPIAQWRRREAAAEHTYR*FTAGPP
Trigger: GGGTGGCCCCGCCGTGAACCACCTGTACGTGTGCTC...AGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCGAAGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACACGATCCTCCTGCGCTTaGCCAGTGCCTCGATCTCCA +
Preference number: 4 (lower is better)
Translates to: SSPASLLGTNTPSAGWGTRSSCA*PVPRSP
Trigger: TGGAGATCGAGGCACTGGCCAAGCGCAGGAGGATCG...TGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GACTCTGGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGGGGCCAATCGCACAGTaGAGACGCCGTGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: DSGPGRSLCLTGVASGSRGPIAQ*RRREAA
Trigger: TGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCC...CCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCCAGAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCGCGGGACCCACCTGCTaGAATTTCCACCACCACCTG +
Preference number: 4 (lower is better)
Translates to: RGSGPIAQWRRREAAATPAGPTC*NFHHHL
Trigger: CAGGTGGTGGTGGAAATTCCAGCAGGTGGGTCCCGC...GGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGACGGCTTTCAGAAGGCTaGGGCCAATGCCAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: SASRQCSVRPLAAAPAFRRLSEG*GQCQGN
Trigger: GTTCCCCTGGCATTGGCCCCAGCCTTCTGAAAGCCG...TCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGGGCTCACCTCTGGGTaGCACGAAGCCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: APRPGGFSRGFGALLCSVGLTSG*HEAHRK
Trigger: CTTCCTGTGGGCTTCGTGTCACCCAGAGGTGAGCCC...CACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp AGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACAATAGGTTTGGTCCGGTaGCCCCACACGACTGACAGG +
Preference number: 4 (lower is better)
Translates to: SSPASLLGTNTPSAGWGTIGLVR*PHTTDR
Trigger: CCTGTCAGTCGTGTGGGGTCACCGGACCAAACCTAT...TGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp TGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTGAGCGCTCCACCACCGGCTCCTTaGGCTCCTCGTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: WLPPLSIQRLLPRIHLSAPPPAP*APRAAG
Trigger: ACCAGCTGCACGAGGAGCTCAAGGAGCCGGTGGTGG...AGCGCTCAGGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTGAGGAGCTGCGTAGGTaGGCATCATTGTCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: GARSQPAQKPLCVATVQREELRR*ASLSGS
Trigger: AGAGCCGGACAATGATGCTCACCTACGCAGCTCCTC...ACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp TGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGAAGGCCGTCAAAGATGTCTaGGATGACGCTGCGGTAGCG +
Preference number: 4 (lower is better)
Translates to: CVATVQRAASGCSAGFQKAVKDV*DDAAVA
Trigger: CGCTACCGCAGCGTCATCTCAGACATCTTTGACGGC...CTTCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCGGATGTACTCCACAATaGAGGCCAGCCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GRTSPWRFLQGLWCLAVLGCTPQ*RPASPG
Trigger: CCCAGGGCTGGCTGGCCTTCATTGTGGAGTACATCC...GAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTGGAGGTCGTAGGTGGTaGTCTGGGATGTGCACTCCT +
Preference number: 4 (lower is better)
Translates to: GARSQPAQKPLCVATVQRGGRRW*SGMCTP
Trigger: AGGAGTGCACATCCCAGATCACCACCTACGACCTCC...ACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGGACAAACGTTCTGGGGCAGGATaGCCACCAGGTCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: GPGRSLCLTGVASGSRDKRSGAG*PPGRRC
Trigger: ACATCGACGACCTGGTGGTCATCCTGCCCCAGAACG...TTTGTCCCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTTCAGAGCCTTCCTGGTaGCGCCCAGGAGATGCAGAG +
Preference number: 4 (lower is better)
Translates to: DPSLHRSLSASRQCSVRPSEPSW*RPGDAE
Trigger: CTCTGCATCTCCTGGGCGTCACCAGGAAGGCTCTGA...AGGCCGCACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGGCCTGCACTCGCAACTaGGCCGCCGCCGCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: NFEANYSQSRGQAQQDAVACTRN*AAAACQ
Trigger: CTGACAGGCGGCGGCGGCGCAGTTGCGAGTGCAGGC...CACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315480.9
ENST00000372429.8
CDS-3UTR GCA 90 bp GCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACATCTGGCTTCTTATCTGTaGGCACCAGGCCGCCACACT +
Preference number: 4 (lower is better)
Translates to: AARPLFWAQTRLPRGGAHLASYL*APGRHT
Trigger: AGTGTGGCGGCCTGGTGCGCACAGATAAGAAGCCAG...ATGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GACTCTGGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGCTGGCTTCTTATCTGTaGGCACCAGGCCGCCACACT +
Preference number: 4 (lower is better)
Translates to: DSGPGRSLCLTGVASGSRLASYL*APGRHT
Trigger: AGTGTGGCGGCCTGGTGCGCACAGATAAGAAGCCAG...CCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCCAGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp ATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCCCTTCCGCCTCCGGCTaGCAGCACTCAATACCTGGG +
Preference number: 4 (lower is better)
Translates to: MVAPRPGGFSRGFGALLCPSASG*QHSIPG
Trigger: CCCAGGTATTGAGTGCTGGCAGCCGGAGGCGGAAGG...GCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp ACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGCCTTCCGCCTCCGGCTaGCAGCACTCAATACCTGGG +
Preference number: 4 (lower is better)
Translates to: TDMGPDPSLHRSLSASRQPSASG*QHSIPG
Trigger: CCCAGGTATTGAGTGCTGGCAGCCGGAGGCGGAAGG...CTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACCCTTCCGCCTCCGGCTaGCAGCACTCAATACCTGGG +
Preference number: 4 (lower is better)
Translates to: APGQSHSGDAVKQQLLPDPSASG*QHSIPG
Trigger: CCCAGGTATTGAGTGCTGGCAGCCGGAGGCGGAAGG...GTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CCCGTCTGCTTTGATCCTGATGATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGCCAGGGACACCACCTaGTGTCGCTCCCGCATGGCC +
Preference number: 4 (lower is better)
Translates to: PVCFDPDDGRTSPWRFLQARDTT*CRSRMA
Trigger: GGCCATGCGGGAGCGACAGCAGGTGGTGTCCCTGGC...CTGGAGAAACCGCCAGGGCGAGGTGCGACCATCATCAGGATCAAAGCAGACGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp ATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCCCTGCGCTTGGCCAGTaGCTCGATCTCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: MVAPRPGGFSRGFGALLCPALGQ*LDLHLA
Trigger: TGCCAGGTGGAGATCGAGGCACTGGCCAAGCGCAGG...GCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCATACACGGCGGGGTTCTaGAGCAGCCCGGCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: VAPRPGGFSRGFGALLCSYTAGF*SSPASL
Trigger: AAGAGAGGCCGGGCTGCTGCAGAACCCCGCCGTGTA...TGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTTACACGGCGGGGTTCTaGAGCAGCCCGGCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: PRPGGFSRGFGALLCSVAYTAGF*SSPASL
Trigger: AAGAGAGGCCGGGCTGCTGCAGAACCCCGCCGTGTA...AGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CACGGGCACTCAGCAGTGGGGCCGGGCCATGTCCAGGGCCCTCCCACATCCTCCCCAGAGTCTTCAGTCTaGAGGAGAAGTGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: HGHSAVGPGHVQGPPTSSPESSV*RRSAES
Trigger: GCTCTCAGCACTTCTCCTGCAGACTGAAGACTCTGG...GGAGGATGTGGGAGGGCCCTGGACATGGCCCGGCCCCACTGCTGAGTGCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315480.9
CDS-3UTR GCA 90 bp GGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGGACAAAGTGTGGGGGACCAGCTaGCTCCAGAAACATCCCCCA +
Preference number: 4 (lower is better)
Translates to: GPGRSLCLTGVASGSRDKVWGTS*LQKHPP
Trigger: TGGGGGATGTTTCTGGAGGCAGCTGGTCCCCCACAC...TTTGTCCCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGAAGTGGGCTCTGCACTGCTaGTGCTGGGAGGAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: CVATVQRAASGCSAGFQKWALHC*CWEEGK
Trigger: TTTCCCTTCCTCCCAGCAGCAGCAGTGCAGAGCCCA...CTTCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCCTGAGCGCTGCACCCTaGACAGCCCCCACATCCCTC +
Preference number: 4 (lower is better)
Translates to: VLSGSLHSASRGCFPGSTLSAAP*TAPTSL
Trigger: GAGGGATGTGGGGGCTGTGCAGGGTGCAGCGCTCAG...GGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCCTCCAGGGGCTTTGGTaGCTTGCTGTGCTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GRTSPWRFLQGLWCLAVLLQGLW*LAVLSG
Trigger: GCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAG...GAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTGAGCGCTCGTGCGGCCTCTGGCTaGAGCGCCGGCTTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: WLPPLSIQRLLPRIHLSARAASG*SAGFQK
Trigger: CTTCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACG...AGCGCTCAGGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGCGTGCGGCCTCTGGCTaGAGCGCCGGCTTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGALVPCCAQWLPPLSIQRAASG*SAGFQK
Trigger: CTTCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACG...CTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp ATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCGGCCCGATCCCAGCCTaGACAGAAGCCTCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: MVAPRPGGFSRGFGALLCGPIPA*TEASLR
Trigger: ACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCC...GCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACGCCTGGGCTCACCTCTaGGTGACACGAAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: APGQSHSGDAVKQQLLPDAWAHL*VTRSPQ
Trigger: CTGTGGGCTTCGTGTCACCCAGAGGTGAGCCCAGGC...GTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGCTCCTCGTGCAGCTaGTCCATCAGGCAGCGAAGG +
Preference number: 4 (lower is better)
Translates to: GRTSPWRFLQGLWCLAVLSSSCS*SIRQRR
Trigger: CCTTCGCTGCCTGATGGACCAGCTGCACGAGGAGCT...GAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCATCATTGTCCGGCTCTaGCGTCCGGCAGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: MVAPRPGGFSRGFGALLCIIVRL*RPAGAG
Trigger: TCCAGCCCCTGCCGGACGCCAGAGCCGGACAATGAT...GCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ATCGGGCTCCAGGGACAAAGCTGGGCCGAGCTAGCAAGAGGACAGTTGTGGGGGTTGGCATGGCCCTCGTaGTGGTGGACGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: IGLQGQSWAELARGQLWGLAWPS*WWTGLQ
Trigger: CTGCAGCCCCGTCCACCACCACGAGGGCCATGCCAA...CCCCCACAACTGTCCTCTTGCTAGCTCGGCCCAGCTTTGTCCCTGGAGCCCGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GTTCTGCAGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGATGTGCACTCCTTaGCAAGGAAGGGGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: VLQQPGLSSGHKHAFRGVGMCTP*QGRGAG
Trigger: ACCTGCGCCCCTTCCTTGCCAAGGAGTGCACATCCC...CACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTGCTGTCGCTCCCGCATaGCCTCCTCGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PGQSHSGDAVKQQLLPDSAVAPA*PPRCSS
Trigger: GGAAGAGCAGCGAGGAGGCCATGCGGGAGCGACAGC...AGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TGCAGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCTCTCCACCTGGCAGATaGAGCACACGTACAGGTGGT +
Preference number: 4 (lower is better)
Translates to: CSSPASLLGTNTPSAGWGSPPGR*STRTGG
Trigger: ACCACCTGTACGTGTGCTCCATCTGCCAGGTGGAGA...GCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACAGGCGACTCCTCGGCCTaGAAGGCCTTGTTCAACTTG +
Preference number: 4 (lower is better)
Translates to: SSPASLLGTNTPSAGWGTGDSSA*KALFNL
Trigger: CAAGTTGAACAAGGCCTTCCAGGCCGAGGAGTCGCC...TGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGAAGGGCGACTCCTCGGCCTaGAAGGCCTTGTTCAACTTG +
Preference number: 4 (lower is better)
Translates to: CVATVQRAASGCSAGFQKGDSSA*KALFNL
Trigger: CAAGTTGAACAAGGCCTTCCAGGCCGAGGAGTCGCC...CTTCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACAGCTCCCTGCTTCAGCTaGACATGGCCGCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SSPASLLGTNTPSAGWGTAPCFS*TWPLPL
Trigger: CAAAGGAAGCGGCCATGTCCAGCTGAAGCAGGGAGC...TGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCGGCTGCGCCACACTCTaGCGGATGGCAATCTCGGGG +
Preference number: 4 (lower is better)
Translates to: VLSGSLHSASRGCFPGSTGCATL*RMAISG
Trigger: CCCCGAGATTGCCATCCGCCAGAGTGTGGCGCAGCC...GGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGTCTTCGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTGCCCGGCCTCTCTTCTaGGCACAAACACGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: SLRGSGPIAQWRRREAAAARPLF*AQTRLP
Trigger: CGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGC...AGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCGAAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTCTCCAGGGACAAAGCTaGGCCGAGCTAGCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: GARSQPAQKPLCVATVQRLQGQS*AELARG
Trigger: TCCTCTTGCTAGCTCGGCCCAGCTTTGTCCCTGGAG...ACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTGAGCGCTGGTCGCACCTCGCCCTaGCGGTTTCTCCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: WLPPLSIQRLLPRIHLSAGRTSP*RFLQGL
Trigger: AAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACC...AGCGCTCAGGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTTCCTTTGTTGACAGCTaGCAGCGACGGGCTATAGGG +
Preference number: 4 (lower is better)
Translates to: GARSQPAQKPLCVATVQRSFVDS*QRRAIG
Trigger: CCCTATAGCCCGTCGCTGTCAGCTGTCAACAAAGGA...ACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp AGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACAACCAACTTGATCCCATaGGACAGACTGGTGGGGACC +
Preference number: 4 (lower is better)
Translates to: SSPASLLGTNTPSAGWGTTNLIP*DRLVGT
Trigger: GGTCCCCACCAGTCTGTCTCATGGGATCAAGTTGGT...TGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp TGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGAAGACCAACTTGATCCCATaGGACAGACTGGTGGGGACC +
Preference number: 4 (lower is better)
Translates to: CVATVQRAASGCSAGFQKTNLIP*DRLVGT
Trigger: GGTCCCCACCAGTCTGTCTCATGGGATCAAGTTGGT...CTTCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp TGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTGAGCGCTGGCAGTCTTCCAGGGTaGCGACAGGCCCCCAAAACC +
Preference number: 4 (lower is better)
Translates to: WLPPLSIQRLLPRIHLSAGSLPG*RQAPKT
Trigger: GGTTTTGGGGGCCTGTCGTCACCCTGGAAGACTGCC...AGCGCTCAGGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp TCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCACGTACCACTGCCCATTaGTCACGTTCTGGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: SLRRDSAACGLWLQRRLSRTTAH*SRSGSR
Trigger: CCTACTGCCAGAACGTGATCAATGGGCAGTGGTACG...TGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACCGTTCTGGGGCAGGATaGCCACCAGGTCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: APGQSHSGDAVKQQLLPDRSGAG*PPGRRC
Trigger: ACATCGACGACCTGGTGGTCATCCTGCCCCAGAACG...GTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp CAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTCGTTCTGGGGCAGGATaGCCACCAGGTCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: QTWGPIPACTEASLRRDSRSGAG*PPGRRC
Trigger: ACATCGACGACCTGGTGGTCATCCTGCCCCAGAACG...ACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp AGTCTTCGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTCTGCAGGAGAAGTGCTaGGAGCAGCCCGGGACTTCA +
Preference number: 4 (lower is better)
Translates to: SLRGSGPIAQWRRREAAALQEKC*EQPGTS
Trigger: TGAAGTCCCGGGCTGCTCTCAGCACTTCTCCTGCAG...AGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCGAAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGGGGGCTGCCAGCCGCTaGTCCAGGAATACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PGALVPCCAQWLPPLSIQGAASR*SRNTSF
Trigger: GAAGGAGGTATTCCTGGAGCAGCGGCTGGCAGCCCC...CTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGGACAAATCCTTGAGCTCCTCGTaGAGCTGGTCCATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GPGRSLCLTGVASGSRDKSLSSS*SWSIRQ
Trigger: CTGCCTGATGGACCAGCTGCACGAGGAGCTCAAGGA...TTTGTCCCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTCCGAGTTTGTACGCTaGTGGCCCCAGGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: RGSGPIAQWRRREAAATPSEFVR*WPQENL
Trigger: CAAGTTCTCCTGGGGCCAGCAGCGTACAAACTCGGA...GGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp ACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGATTTGTGGGGCGGGATaGCTCCGTGGGAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: TDMGPDPSLHRSLSASRQICGAG*LRGSRG
Trigger: TCCTCTGCTCCCACGGAGGCATCCCGCCCCACAAAT...CTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTCTGGGCCCAGCGGCTaGGCCACACTCTGGCGGATG +
Preference number: 4 (lower is better)
Translates to: NFEANYSQSRGQAQQDAVSGPSG*ATLWRM
Trigger: CATCCGCCAGAGTGTGGCGCAGCCGCTGGGCCCAGA...CACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACATTCGGCTTCGATCTTCTaGTCCCCGTGCAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: AARPLFWAQTRLPRGGAHSASIF*SPCRFS
Trigger: AGAGAACCTGCACGGGGAGCAGAAGATCGAAGCCGA...ATGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGTGTGGGGGACCAGCTaGCTCCAGAAACATCCCCCA +
Preference number: 4 (lower is better)
Translates to: QTWGPIPACTEASLRRDSVWGTS*LQKHPP
Trigger: TGGGGGATGTTTCTGGAGGCAGCTGGTCCCCCACAC...ACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp ATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCGTGTGGGGGACCAGCTaGCTCCAGAAACATCCCCCA +
Preference number: 4 (lower is better)
Translates to: MVAPRPGGFSRGFGALLCVWGTS*LQKHPP
Trigger: TGGGGGATGTTTCTGGAGGCAGCTGGTCCCCCACAC...GCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGGACAAATCTGCGGGACCCACCTaGTGGAATTTCCACCACCAC +
Preference number: 4 (lower is better)
Translates to: GPGRSLCLTGVASGSRDKSAGPT*WNFHHH
Trigger: GTGGTGGTGGAAATTCCAGCAGGTGGGTCCCGCAGA...TTTGTCCCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTGAGCGCTGGCCCGATCCCAGCCTaGACAGAAGCCTCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: WLPPLSIQRLLPRIHLSAGPIPA*TEASLR
Trigger: ACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCC...AGCGCTCAGGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGTCTTCGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTCGGGCTATAGGGGTCTaGAGTGAGTGGAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SLRGSGPIAQWRRREAAARAIGV*SEWRPL
Trigger: CAGAGGCCTCCACTCACTCCAGACCCCTATAGCCCG...AGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCGAAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CACGGGCACTCAGCAGTGGGGCCGGGCCATGTCCAGGGCCCTCCCACATCCTCCGCAGCAAGTCCTCTTTaGTCACCTCTCCTATGGAGT +
Preference number: 4 (lower is better)
Translates to: HGHSAVGPGHVQGPPTSSAASPL*SPLLWS
Trigger: ACTCCATAGGAGAGGTGACCAAAGAGGACTTGCTGC...GGAGGATGTGGGAGGGCCCTGGACATGGCCCGGCCCCACTGCTGAGTGCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315480.9
CDS-3UTR CCA 90 bp AGACAGCACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCCAGAGGGTGGGAGGGTaGCGGGGAGTCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: RQHRHGARSQPAQKPLCVQRVGG*RGVLFR
Trigger: TCTGAACAGGACTCCCCGCCACCCTCCCACCCTCTG...GACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGTGCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGACAGCACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCACAGCTTTCAGAGGGTaGGAGGGTGGCGGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: RQHRHGARSQPAQKPLCVTAFRG*EGGGES
Trigger: GGACTCCCCGCCACCCTCCCACCCTCTGAAAGCTGT...GACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGTGCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GTTCTGCAGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGCATGAGACAGACTGGTaGGGACCACGTAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VLQQPGLSSGHKHAFRGVHETDW*GPRSLA
Trigger: GGCCAAGCTACGTGGTCCCCACCAGTCTGTCTCATG...CACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAAGCTCCTCGTGCAGCTaGTCCATCAGGCAGCGAAGG +
Preference number: 4 (lower is better)
Translates to: VAPRPGGFSRGFGALLCSSSSCS*SIRQRR
Trigger: CCTTCGCTGCCTGATGGACCAGCTGCACGAGGAGCT...TGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCTCCTTCTCAGAGATaGCTCGGCCCGCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: QTWGPIPACTEASLRRDSAPSQR*LGPPHL
Trigger: CAGATGAGGCGGGCCGAGCCATCTCTGAGAAGGAGC...ACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGCTCCTTCTCAGAGATaGCTCGGCCCGCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: VAPRPGGFSRGFGALLCSAPSQR*LGPPHL
Trigger: CAGATGAGGCGGGCCGAGCCATCTCTGAGAAGGAGC...TGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCCGTCAAGGGCAGCCATaGCAGTGTCCACATCAGCGT +
Preference number: 4 (lower is better)
Translates to: GRTSPWRFLQGLWCLAVLRQGQP*QCPHQR
Trigger: ACGCTGATGTGGACACTGCCATGGCTGCCCTTGACG...GAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGATCATTGTCCGGCTCTaGCGTCCGGCAGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PGALVPCCAQWLPPLSIQIIVRL*RPAGAG
Trigger: TCCAGCCCCTGCCGGACGCCAGAGCCGGACAATGAT...CTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGAAGGGAACGTTTCCACTGTaGTGGATACCCGGTCACAGG +
Preference number: 4 (lower is better)
Translates to: CVATVQRAASGCSAGFQKGTFPL*WIPGHR
Trigger: CCTGTGACCGGGTATCCACCACAGTGGAAACGTTCC...CTTCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GACTCTGGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGTGGCTGAATGGAGCTTaGCCAGGTCCTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: DSGPGRSLCLTGVASGSRWLNGA*PGPPFQ
Trigger: CTGGAAAGGAGGACCTGGCCAAGCTCCATTCAGCCA...CCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCCAGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACATTGCACCACCGTCTCGTaGACTTCTGTGACGTACTGG +
Preference number: 4 (lower is better)
Translates to: AARPLFWAQTRLPRGGAHCTTVS*TSVTYW
Trigger: CCAGTACGTCACAGAAGTCCACGAGACGGTGGTGCA...ATGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GACTCTGGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGTGCACCACCGTCTCGTaGACTTCTGTGACGTACTGG +
Preference number: 4 (lower is better)
Translates to: DSGPGRSLCLTGVASGSRCTTVS*TSVTYW
Trigger: CCAGTACGTCACAGAAGTCCACGAGACGGTGGTGCA...CCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCCAGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGGACAAAGTTGGTGATGGGGCCTaGCTCCGCGAAGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: GPGRSLCLTGVASGSRDKVGDGA*LREGVE
Trigger: TTCAACACCTTCGCGGAGCCAGGCCCCATCACCAAC...TTTGTCCCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCCCACACTCTGGCGGATaGCAATCTCGGGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: VLSGSLHSASRGCFPGSTPHSGG*QSRGHL
Trigger: GAGGTGGCCCCGAGATTGCCATCCGCCAGAGTGTGG...GGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CCCGTCTGCTTTGATCCTGATGATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGCTGCGCCACACTCTaGCGGATGGCAATCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PVCFDPDDGRTSPWRFLQGCATL*RMAISG
Trigger: CCCCGAGATTGCCATCCGCCAGAGTGTGGCGCAGCC...CTGGAGAAACCGCCAGGGCGAGGTGCGACCATCATCAGGATCAAAGCAGACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGGGCCAATCGCACAGTaGAGACGCCGTGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VAPRPGGFSRGFGALLCSGPIAQ*RRREAA
Trigger: TGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCC...TGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCAGCAGGACGCGGTGTaGGGGACCAGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LVPCCAQWLPPLSIQRLLQQDAV*GTSCLQ
Trigger: CTGGAGGCAGCTGGTCCCCCACACCGCGTCCTGCTG...AAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp ATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCCCTATGGAGTCAAGGTaGGGGCAAAGGTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: MVAPRPGGFSRGFGALLCPMESR*GQRSLE
Trigger: CTCCAGGGACCTTTGCCCTCACCTTGACTCCATAGG...GCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGATAGGTTTGGTCCGGTaGCCCCACACGACTGACAGG +
Preference number: 4 (lower is better)
Translates to: APRPGGFSRGFGALLCSVIGLVR*PHTTDR
Trigger: CCTGTCAGTCGTGTGGGGTCACCGGACCAAACCTAT...CACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACATCAGGTCATCGTCCTCTaGCTCAGACTCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: AARPLFWAQTRLPRGGAHQVIVL*LRLSFI
Trigger: GATGAAGGAGAGTCTGAGTCAGAGGACGATGACCTG...ATGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp TGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTGAGCGCTCGTGTCACTCGAATCTaGGTCCCGAGCCTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: WLPPLSIQRLLPRIHLSARVTRI*VPSLRQ
Trigger: CTGACGGAGGCTCGGGACTCAGATTCGAGTGACACG...AGCGCTCAGGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp AGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTGGCCCAGGCCGCAGCATACCTGGGCTTTCTTaGGCACGTACGACGGTGCCA +
Preference number: 4 (lower is better)
Translates to: SGDAVKQQLLPDSGPGRSIPGLS*ARTTVP
Trigger: TGGCACCGTCGTACGTGCTCAAGAAAGCCCAGGTAT...GCTGCGGCCTGGGCCAGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp AGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACAATTCTGGTAGATGGCTaGATGGAGCTTGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SSPASLLGTNTPSAGWGTILVDG*MELGQV
Trigger: GACCTGGCCAAGCTCCATTCAGCCATCTACCAGAAT...TGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCCGAAAGCGCTTTAGGTaGATGCACAGGATCTCGGGC +
Preference number: 4 (lower is better)
Translates to: GRTSPWRFLQGLWCLAVLRKRFR*MHRISG
Trigger: GCCCGAGATCCTGTGCATTCACCTAAAGCGCTTTCG...GAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGGAGGTCGTAGGTGGTaGTCTGGGATGTGCACTCCT +
Preference number: 4 (lower is better)
Translates to: APRPGGFSRGFGALLCSVGGRRW*SGMCTP
Trigger: AGGAGTGCACATCCCAGATCACCACCTACGACCTCC...CACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GTTCTGCAGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGCGTACCACTGCCCATTaGTCACGTTCTGGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: VLQQPGLSSGHKHAFRGVRTTAH*SRSGSR
Trigger: CCTACTGCCAGAACGTGATCAATGGGCAGTGGTACG...CACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp TGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTGAGCGCTTCAGAGCCTTCCTGGTaGCGCCCAGGAGATGCAGAG +
Preference number: 4 (lower is better)
Translates to: WLPPLSIQRLLPRIHLSASEPSW*RPGDAE
Trigger: CTCTGCATCTCCTGGGCGTCACCAGGAAGGCTCTGA...AGCGCTCAGGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTCTGGCTTCTTATCTGTaGGCACCAGGCCGCCACACT +
Preference number: 4 (lower is better)
Translates to: QTWGPIPACTEASLRRDSLASYL*APGRHT
Trigger: AGTGTGGCGGCCTGGTGCGCACAGATAAGAAGCCAG...ACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GTTCTGCAGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGAGGGGCGAGAGGAGCTaGGTAGGTGAGCATCATTGT +
Preference number: 4 (lower is better)
Translates to: VLQQPGLSSGHKHAFRGVRGERS*VGEHHC
Trigger: ACAATGATGCTCACCTACGCAGCTCCTCTCGCCCCT...CACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGCAACCGCAGGACTTTaGAGTACTTCACTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: SLRRDSAACGLWLQRRLSATAGL*STSLRS
Trigger: GGAACGGAGTGAAGTACTGCAAAGTCCTGCGGTTGC...TGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCAGCGCTTTAGGTGAATaGACAGGATCTCGGGCAACC +
Preference number: 4 (lower is better)
Translates to: RGSGPIAQWRRREAAATPSALGE*TGSRAT
Trigger: GGTTGCCCGAGATCCTGTGCATTCACCTAAAGCGCT...GGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCGATGTAGTGCCCACTaGCTGCCGTGCCGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LVPCCAQWLPPLSIQRLLRCSAH*LPCRGG
Trigger: GCCACCACGGCACGGCAGGCAGTGGGCACTACATCG...AAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGCGATCTCGATCCTCCTaGGCTTGGCCAGTGCCTCGA +
Preference number: 4 (lower is better)
Translates to: PGALVPCCAQWLPPLSIQRSRSS*AWPVPR
Trigger: TCGAGGCACTGGCCAAGCGCAGGAGGATCGAGATCG...CTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTGTGACGCCCAGGAGATaGAGAGGTGCGGCGGGACCA +
Preference number: 4 (lower is better)
Translates to: LVPCCAQWLPPLSIQRLLVTPRR*RGAAGP
Trigger: TGGTCCCGCCGCACCTCTGCATCTCCTGGGCGTCAC...AAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAATCAGCTCGGGAAGCTaGCTTTGCCTCAAATGGCCA +
Preference number: 4 (lower is better)
Translates to: SLRRDSAACGLWLQRRLSISSGS*LCLKWP
Trigger: TGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGAT...TGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTTCTGCGGGACCCACCTaGTGGAATTTCCACCACCAC +
Preference number: 4 (lower is better)
Translates to: QTWGPIPACTEASLRRDSSAGPT*WNFHHH
Trigger: GTGGTGGTGGAAATTCCAGCAGGTGGGTCCCGCAGA...ACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AGACAGCACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCACAGAAGCCTCTCTaGGTCGCGACAGTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: RQHRHGARSQPAQKPLCVAQKPL*VATVQR
Trigger: ACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGC...GACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGTGCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGAGTTTGTACGCTGCTaGCCCCAGGAGAACTTGCGG +
Preference number: 4 (lower is better)
Translates to: QTWGPIPACTEASLRRDSEFVRC*PQENLR
Trigger: CCGCAAGTTCTCCTGGGGCCAGCAGCGTACAAACTC...ACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGGACAAAGGAACGTTTCCACTGTaGTGGATACCCGGTCACAGG +
Preference number: 4 (lower is better)
Translates to: GPGRSLCLTGVASGSRDKGTFPL*WIPGHR
Trigger: CCTGTGACCGGGTATCCACCACAGTGGAAACGTTCC...TTTGTCCCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGACAGCACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCCACAGGCGCCTGGCTTaGCCGGCACATTCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: RQHRHGARSQPAQKPLCVHRRLA*PAHSGR
Trigger: TCTACCAGAATGTGCCGGCCAAGCCAGGCGCCTGTG...GACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGTGCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ATCGGGCTCCAGGGACAAAGCTGGGCCGAGCTAGCAAGAGGACAGTTGTGGGGGCACAGGCGCCTGGCTTaGCCGGCACATTCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: IGLQGQSWAELARGQLWGHRRLA*PAHSGR
Trigger: TCTACCAGAATGTGCCGGCCAAGCCAGGCGCCTGTG...CCCCCACAACTGTCCTCTTGCTAGCTCGGCCCAGCTTTGTCCCTGGAGCCCGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGCCTGCCGTGCCGTGGTaGCAGATGACCGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: NFEANYSQSRGQAQQDAVPAVPW*QMTERR
Trigger: CCTCCTCTCGGTCATCTGCCACCACGGCACGGCAGG...CACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCACTGCCTGCCGTGCCGTaGTGGCAGATGACCGAGAGG +
Preference number: 4 (lower is better)
Translates to: GQAVRYPCFIIRFPGGGSLPAVP*WQMTER
Trigger: CCTCTCGGTCATCTGCCACCACGGCACGGCAGGCAG...TGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCACAGCTTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGTTGGTGATGGGGCCTaGCTCCGCGAAGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: APRPGGFSRGFGALLCSVVGDGA*LREGVE
Trigger: TTCAACACCTTCGCGGAGCCAGGCCCCATCACCAAC...CACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTTGCTCCCAGACGTTCTaGGGCAGGATGACCACCAGG +
Preference number: 4 (lower is better)
Translates to: PGQSHSGDAVKQQLLPDSCSQTF*GRMTTR
Trigger: CCTGGTGGTCATCCTGCCCCAGAACGTCTGGGAGCA...AGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAGAGCACACGTACAGGTaGTTCACGGCGGGGCCACCC +
Preference number: 4 (lower is better)
Translates to: GQAVRYPCFIIRFPGGGSEHTYR*FTAGPP
Trigger: GGGTGGCCCCGCCGTGAACCACCTGTACGTGTGCTC...TGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCACAGCTTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTGGCCCAGGCCGCAGCTCTCCACCTGGCAGATaGAGCACACGTACAGGTGGT +
Preference number: 4 (lower is better)
Translates to: SGDAVKQQLLPDSGPGRSSPPGR*STRTGG
Trigger: ACCACCTGTACGTGTGCTCCATCTGCCAGGTGGAGA...GCTGCGGCCTGGGCCAGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTCGATCCTCCTGCGCTTaGCCAGTGCCTCGATCTCCA +
Preference number: 4 (lower is better)
Translates to: PGQSHSGDAVKQQLLPDSRSSCA*PVPRSP
Trigger: TGGAGATCGAGGCACTGGCCAAGCGCAGGAGGATCG...AGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACCTCCAGGGACAAAGCTaGGCCGAGCTAGCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: APGQSHSGDAVKQQLLPDLQGQS*AELARG
Trigger: TCCTCTTGCTAGCTCGGCCCAGCTTTGTCCCTGGAG...GTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGCATCCGGTTCCCTGGTaGGGGCTCAGCAAATTTCCC +
Preference number: 4 (lower is better)
Translates to: TDMGPDPSLHRSLSASRQHPVPW*GLSKFP
Trigger: GGGAAATTTGCTGAGCCCCCACCAGGGAACCGGATG...CTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACAAAGACGCAGTAGTGTaGGGGGTCTGGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: APGQSHSGDAVKQQLLPDKDAVV*GVWSQS
Trigger: GCTCTGGGACCAGACCCCCCACACTACTGCGTCTTT...GTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CCCGTCTGCTTTGATCCTGATGATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGTGAGTGGAGGCCTCTaGCAAGGAGCCTGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: PVCFDPDDGRTSPWRFLQVSGGL*QGAWRS
Trigger: GCTTCGCCAGGCTCCTTGCCAGAGGCCTCCACTCAC...CTGGAGAAACCGCCAGGGCGAGGTGCGACCATCATCAGGATCAAAGCAGACGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358355.5
CDS-3UTR TCA 90 bp ACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTCCTTTGTTGACAGCTaGCAGCGACGGGCTATAGGG +
Preference number: 4 (lower is better)
Translates to: TDMGPDPSLHRSLSASRQSFVDS*QRRAIG
Trigger: CCCTATAGCCCGTCGCTGTCAGCTGTCAACAAAGGA...CTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGATACCTGGGCTTTCTTaGGCACGTACGACGGTGCCA +
Preference number: 4 (lower is better)
Translates to: APRPGGFSRGFGALLCSVIPGLS*ARTTVP
Trigger: TGGCACCGTCGTACGTGCTCAAGAAAGCCCAGGTAT...CACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp ATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCCAAAGATGTCTGAGATaGCGCTGCGGTAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: MVAPRPGGFSRGFGALLCQRCLR*RCGSAA
Trigger: AGCAGCGCTACCGCAGCGTCATCTCAGACATCTTTG...GCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp ACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGCATGGCCGCTTCCTTTaGCCTGTGCAATCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TDMGPDPSLHRSLSASRQHGRFL*PVQSCC
Trigger: ACAGCAGGATTGCACAGGTCAAAGGAAGCGGCCATG...CTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGGGGGCTGCCAGCCGCTaGTCCAGGAATACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: NFEANYSQSRGQAQQDAVGAASR*SRNTSF
Trigger: GAAGGAGGTATTCCTGGAGCAGCGGCTGGCAGCCCC...CACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACAGCTTCTGGTAGCTCTTaGACAGGGCTGGCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: SSPASLLGTNTPSAGWGTASGSS*TGLASY
Trigger: ATAAGAAGCCAGCCCTGTGCAAGAGCTACCAGAAGC...TGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTGGCCCAGGCCGCAGCCTTGGCCGTTTCTTATaGCAGACCTCAGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: SGDAVKQQLLPDSGPGRSLGRFL*QTSETS
Trigger: GCTGGTCTCTGAGGTCTGGCATAAGAAACGGCCAAG...GCTGCGGCCTGGGCCAGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AGTCTTCGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTTCCGAGTTTGTACGCTaGTGGCCCCAGGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: SLRGSGPIAQWRRREAAASEFVR*WPQENL
Trigger: CAAGTTCTCCTGGGGCCAGCAGCGTACAAACTCGGA...AGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCGAAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AGACAGCACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGTCCTCGTCCACTTaGTCCGAGTTTGTACGCTGC +
Preference number: 4 (lower is better)
Translates to: RQHRHGARSQPAQKPLCVASSST*SEFVRC
Trigger: GCAGCGTACAAACTCGGAGCAAGTGGACGAGGACGC...GACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGTGCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTGGGGGACCAGGGGCGAGAGGAGCTaGGTAGGTGAGCATCATTGT +
Preference number: 4 (lower is better)
Translates to: ANYSQSRGQAQQDAVWGTRGERS*VGEHHC
Trigger: ACAATGATGCTCACCTACGCAGCTCCTCTCGCCCCT...GGTCCCCCACACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GCTGCCTTTGCCTCAAATGGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGGGTGGTGGACGGGGCTaGAGGGGCGAGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AAFASNGQAVRYPCFIIRGGGRG*RGERSC
Trigger: GCAGCTCCTCTCGCCCCTGCAGCCCCGTCCACCACC...CCGGATGATGAAACAGGGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp ACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTGTAGTGCCCACTGCCTaGCGTGCCGTGGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: TSRQITANPGGRLSRTRCVVPTA*RAVVAD
Trigger: ATCTGCCACCACGGCACGGCAGGCAGTGGGCACTAC...ACACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTGTAGTGCCCACTGCCTaGCGTGCCGTGGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LVPCCAQWLPPLSIQRLLVVPTA*RAVVAD
Trigger: ATCTGCCACCACGGCACGGCAGGCAGTGGGCACTAC...AAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGGACAAAGCATGGCCTCCTCGCTaGTCTTCCTGTAGAAGAGTA +
Preference number: 4 (lower is better)
Translates to: GPGRSLCLTGVASGSRDKAWPPR*SSCRRV
Trigger: TACTCTTCTACAGGAAGAGCAGCGAGGAGGCCATGC...TTTGTCCCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAATCTGTTGTACAGGTaGTCCCAGACGTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GRTSPWRFLQGLWCLAVLNLLYR*SQTFWG
Trigger: GCCCCAGAACGTCTGGGAGCACCTGTACAACAGATT...GAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GTTCTGCAGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGAATCTGTTGTACAGGTaGTCCCAGACGTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VLQQPGLSSGHKHAFRGVNLLYR*SQTFWG
Trigger: GCCCCAGAACGTCTGGGAGCACCTGTACAACAGATT...CACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGAAGCCAAACCAACTTTTCTaGCTCTTTACACGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: CVATVQRAASGCSAGFQKPNQLF*LFTRRG
Trigger: ACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGG...CTTCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp ATCGGGCTCCAGGGACAAAGCTGGGCCGAGCTAGCAAGAGGACAGTTGTGGGGGTGGGCTCTGCACTGCTaGTGCTGGGAGGAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: IGLQGQSWAELARGQLWGWALHC*CWEEGK
Trigger: TTTCCCTTCCTCCCAGCAGCAGCAGTGCAGAGCCCA...CCCCCACAACTGTCCTCTTGCTAGCTCGGCCCAGCTTTGTCCCTGGAGCCCGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTGAGCGCTTCTGCGGGACCCACCTaGTGGAATTTCCACCACCAC +
Preference number: 4 (lower is better)
Translates to: WLPPLSIQRLLPRIHLSASAGPT*WNFHHH
Trigger: GTGGTGGTGGAAATTCCAGCAGGTGGGTCCCGCAGA...AGCGCTCAGGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGGTCACCTCTCCTATaGAGTCAAGGTGAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: RGSGPIAQWRRREAAATPWSPLL*SQGEGK
Trigger: TTTGCCCTCACCTTGACTCCATAGGAGAGGTGACCA...GGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGAGCAGCAAGTCCTCTTTaGTCACCTCTCCTATGGAGT +
Preference number: 4 (lower is better)
Translates to: SASRQCSVRPLAAAPAFRAASPL*SPLLWS
Trigger: ACTCCATAGGAGAGGTGACCAAAGAGGACTTGCTGC...TCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACATTTGCCTGTGCATGAATaGTGCTGTGGTCAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: AARPLFWAQTRLPRGGAHLPVHE*CCGQQR
Trigger: CCTTTGCTGACCACAGCACCATTCATGCACAGGCAA...ATGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGCAGAGGGTGGGAGGGTaGCGGGGAGTCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: NFEANYSQSRGQAQQDAVQRVGG*RGVLFR
Trigger: TCTGAACAGGACTCCCCGCCACCCTCCCACCCTCTG...CACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTACAGCTTTCAGAGGGTaGGAGGGTGGCGGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: TSRQITANPGGRLSRTRCTAFRG*EGGGES
Trigger: GGACTCCCCGCCACCCTCCCACCCTCTGAAAGCTGT...ACACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTGGAACGTTTCCACTGTaGTGGATACCCGGTCACAGG +
Preference number: 4 (lower is better)
Translates to: PRPGGFSRGFGALLCSVAGTFPL*WIPGHR
Trigger: CCTGTGACCGGGTATCCACCACAGTGGAAACGTTCC...AGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTCCTCCTTTCCAGGAATaGGCAGTGATAAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GARSQPAQKPLCVATVQRPPFQE*AVISPG
Trigger: TCCAGGACTTATCACTGCCCATTCCTGGAAAGGAGG...ACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTGGGGGACCTGGCTGAATGGAGCTTaGCCAGGTCCTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ANYSQSRGQAQQDAVWGTWLNGA*PGPPFQ
Trigger: CTGGAAAGGAGGACCTGGCCAAGCTCCATTCAGCCA...GGTCCCCCACACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCGTTGGTGATGGGGCCTaGCTCCGCGAAGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: VLSGSLHSASRGCFPGSTVGDGA*LREGVE
Trigger: TTCAACACCTTCGCGGAGCCAGGCCCCATCACCAAC...GGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGACAGCACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCCTCCAGGGACAAAGCTaGGCCGAGCTAGCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: RQHRHGARSQPAQKPLCVLQGQS*AELARG
Trigger: TCCTCTTGCTAGCTCGGCCCAGCTTTGTCCCTGGAG...GACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGTGCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGACAGCACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCCATCCGGTTCCCTGGTaGGGGCTCAGCAAATTTCCC +
Preference number: 4 (lower is better)
Translates to: RQHRHGARSQPAQKPLCVHPVPW*GLSKFP
Trigger: GGGAAATTTGCTGAGCCCCCACCAGGGAACCGGATG...GACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGTGCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTTGCCTTTGCCTCAAATaGCCAAGCTGTGAGGTATCC +
Preference number: 4 (lower is better)
Translates to: GARSQPAQKPLCVATVQRCLCLK*PSCEVS
Trigger: GGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCA...ACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCTGCACTGCTGCTGCTaGGAGGAAGGGAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: PRPGGFSRGFGALLCSVALHCCC*EEGKVC
Trigger: ACAGACTTTCCCTTCCTCCCAGCAGCAGCAGTGCAG...AGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp CCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGATTCGCATCCTTTGTTaGCAGCTGACAGCGACGGGC +
Preference number: 4 (lower is better)
Translates to: PGALVPCCAQWLPPLSIQIRILC*QLTATG
Trigger: GCCCGTCGCTGTCAGCTGTCAACAAAGGATGCGAAT...CTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp ATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCGTGACCCCACACGACTaGCAGGTTCCCTTAGATTTG +
Preference number: 4 (lower is better)
Translates to: MVAPRPGGFSRGFGALLCVTPHD*QVPLDL
Trigger: CAAATCTAAGGGAACCTGTCAGTCGTGTGGGGTCAC...GCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp TGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTGAGCGCTACCAACTTGATCCCATaGGACAGACTGGTGGGGACC +
Preference number: 4 (lower is better)
Translates to: WLPPLSIQRLLPRIHLSATNLIP*DRLVGT
Trigger: GGTCCCCACCAGTCTGTCTCATGGGATCAAGTTGGT...AGCGCTCAGGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp AACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGCGTGTCACTCGAATCTaGGTCCCGAGCCTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: NFEANYSQSRGQAQQDAVRVTRI*VPSLRQ
Trigger: CTGACGGAGGCTCGGGACTCAGATTCGAGTGACACG...CACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp TGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTGAGCGCTCAAGAACTCATCTTCTaGTGGGCTCCGGTCACCCTC +
Preference number: 4 (lower is better)
Translates to: WLPPLSIQRLLPRIHLSAQELIF*WAPVTL
Trigger: GAGGGTGACCGGAGCCCATCAGAAGATGAGTTCTTG...AGCGCTCAGGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp CCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTCAAAGATGTCTGAGATaGCGCTGCGGTAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: PGQSHSGDAVKQQLLPDSQRCLR*RCGSAA
Trigger: AGCAGCGCTACCGCAGCGTCATCTCAGACATCTTTG...AGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGACACTGCACAAGGCTaGGAATGGAGCCGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VAPRPGGFSRGFGALLCSDTAQG*EWSRQR
Trigger: TCTTTGACGGCTCCATTCTCAGCCTTGTGCAGTGTC...TGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCGCTGTTGATCTTGAATaGGTACATCACCTCGTGCCG +
Preference number: 4 (lower is better)
Translates to: GRTSPWRFLQGLWCLAVLAVDLE*VHHLVP
Trigger: CGGCACGAGGTGATGTACTCATTCAAGATCAACAGC...GAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp CCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGCGTACCACTGCCCATTaGTCACGTTCTGGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: PGALVPCCAQWLPPLSIQRTTAH*SRSGSR
Trigger: CCTACTGCCAGAACGTGATCAATGGGCAGTGGTACG...CTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTTCTCGTGGACTTCTGTaGCGTACTGGTCATCAAACT +
Preference number: 4 (lower is better)
Translates to: GARSQPAQKPLCVATVQRSRGLL*RTGHQT
Trigger: AGTTTGATGACCAGTACGTCACAGAAGTCCACGAGA...ACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GACAGTTGTGGGGGACACAACGATGACAGTGACTGGCAGAGGCACTGCCAGGACACAGTGGAGACGCCGTaGAGCAGCAGCTACTCCCTG +
Preference number: 4 (lower is better)
Translates to: DSCGGHNDDSDWQRHCQDTVETP*SSSYSL
Trigger: CAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGT...GTCCTGGCAGTGCCTCTGCCAGTCACTGTCATCGTTGTGTCCCCCACAACTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp AACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTCAGAGCCTTCCTGGTaGCGCCCAGGAGATGCAGAG +
Preference number: 4 (lower is better)
Translates to: NFEANYSQSRGQAQQDAVSEPSW*RPGDAE
Trigger: CTCTGCATCTCCTGGGCGTCACCAGGAAGGCTCTGA...CACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp ACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTCTGCAGGAGAAGTGCTaGGAGCAGCCCGGGACTTCA +
Preference number: 4 (lower is better)
Translates to: TSRQITANPGGRLSRTRCLQEKC*EQPGTS
Trigger: TGAAGTCCCGGGCTGCTCTCAGCACTTCTCCTGCAG...ACACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp ACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGCTTGGCCGTTTCTTATaGCAGACCTCAGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: TDMGPDPSLHRSLSASRQLGRFL*QTSETS
Trigger: GCTGGTCTCTGAGGTCTGGCATAAGAAACGGCCAAG...CTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCACTTGGCCGTTTCTTATaGCAGACCTCAGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: VAPRPGGFSRGFGALLCSLGRFL*QTSETS
Trigger: GCTGGTCTCTGAGGTCTGGCATAAGAAACGGCCAAG...TGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GAAAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCAGCTCCGTCTCGGCCTaGGAGCTGCCCCCGCCACGC +
Preference number: 4 (lower is better)
Translates to: ESLSSLASAREAAFASNGSSVSA*ELPPPR
Trigger: GCGTGGCGGGGGCAGCTCGCAGGCCGAGACGGAGCT...GCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCAAGCTCCGTCTCGGCCTaGGAGCTGCCCCCGCCACGC +
Preference number: 4 (lower is better)
Translates to: KSVFFSISSGSCLCLKWPSSVSA*ELPPPR
Trigger: GCGTGGCGGGGGCAGCTCGCAGGCCGAGACGGAGCT...TGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTCAAACTCGTACCACTaGCCATTGATCACGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RGSGPIAQWRRREAAATPSNSYH*PLITFW
Trigger: CCAGAACGTGATCAATGGGCAGTGGTACGAGTTTGA...GGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AGTCTTCGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTGCATGGCCTCCTCGCTaGTCTTCCTGTAGAAGAGTA +
Preference number: 4 (lower is better)
Translates to: SLRGSGPIAQWRRREAAAAWPPR*SSCRRV
Trigger: TACTCTTCTACAGGAAGAGCAGCGAGGAGGCCATGC...AGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCGAAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTGAGCGCTTCGGCTTCGATCTTCTaGTCCCCGTGCAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: WLPPLSIQRLLPRIHLSASASIF*SPCRFS
Trigger: AGAGAACCTGCACGGGGAGCAGAAGATCGAAGCCGA...AGCGCTCAGGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGCCAGAGTCTTCAGTCTaGAGGAGAAGTGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: APRPGGFSRGFGALLCSVPESSV*RRSAES
Trigger: GCTCTCAGCACTTCTCCTGCAGACTGAAGACTCTGG...CACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCACTCCAGGGGCTTTGGTaGCTTGCTGTGCTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GQAVRYPCFIIRFPGGGSLQGLW*LAVLSG
Trigger: GCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAG...TGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCACAGCTTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAGCACAGAAGCCTCTCTaGGTCGCGACAGTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: GQAVRYPCFIIRFPGGGSAQKPL*VATVQR
Trigger: ACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGC...TGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCACAGCTTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTACCACAGTCGGAACGTaGTCAGGTTCACGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: PRPGGFSRGFGALLCSVATTVGT*SGSRSS
Trigger: ACTTGACCGTGAACCTGACCACGTTCCGACTGTGGT...AGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGACCACAGTCGGAACGTaGTCAGGTTCACGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: TDMGPDPSLHRSLSASRQTTVGT*SGSRSS
Trigger: ACTTGACCGTGAACCTGACCACGTTCCGACTGTGGT...CTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ACTGCTGAACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGAGCTGTCGCTCCCGCATaGCCTCCTCGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TAELRGKLQPIQGAGSAGAVAPA*PPRCSS
Trigger: GGAAGAGCAGCGAGGAGGCCATGCGGGAGCGACAGC...TCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTTCAGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGACAGCACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCTCTCCACCTGGCAGATaGAGCACACGTACAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RQHRHGARSQPAQKPLCVSPPGR*STRTGG
Trigger: ACCACCTGTACGTGTGCTCCATCTGCCAGGTGGAGA...GACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGTGCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCTGCCTTTGCCTCAAATGGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGGGACCCAGAGTGCCATaGAGGGACCAGCCGGGGCGA +
Preference number: 4 (lower is better)
Translates to: AAFASNGQAVRYPCFIIRGPRVP*RDQPGR
Trigger: TCGCCCCGGCTGGTCCCTCCATGGCACTCTGGGTCC...CCGGATGATGAAACAGGGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315480.9
CDS-3UTR CCA 90 bp ATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCCATCATCCGGTTCCCTaGTGGGGGCTCAGCAAATTT +
Preference number: 4 (lower is better)
Translates to: MVAPRPGGFSRGFGALLCHHPVP*WGLSKF
Trigger: AAATTTGCTGAGCCCCCACCAGGGAACCGGATGATG...GCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GACAGTTGTGGGGGACACAACGATGACAGTGACTGGCAGAGGCACTGCCAGGACGCGGGACCCACCTGCTaGAATTTCCACCACCACCTG +
Preference number: 4 (lower is better)
Translates to: DSCGGHNDDSDWQRHCQDAGPTC*NFHHHL
Trigger: CAGGTGGTGGTGGAAATTCCAGCAGGTGGGTCCCGC...GTCCTGGCAGTGCCTCTGCCAGTCACTGTCATCGTTGTGTCCCCCACAACTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp CCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGGTGACCCCACACGACTaGCAGGTTCCCTTAGATTTG +
Preference number: 4 (lower is better)
Translates to: PGALVPCCAQWLPPLSIQVTPHD*QVPLDL
Trigger: CAAATCTAAGGGAACCTGTCAGTCGTGTGGGGTCAC...CTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTGTTGATCTTGAATaGGTACATCACCTCGTGCCG +
Preference number: 4 (lower is better)
Translates to: APRPGGFSRGFGALLCSVAVDLE*VHHLVP
Trigger: CGGCACGAGGTGATGTACTCATTCAAGATCAACAGC...CACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GTTCTGCAGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGCAAATGGCCAAGCTGTaGGGTATCCCTGTTTCATCA +
Preference number: 4 (lower is better)
Translates to: VLQQPGLSSGHKHAFRGVQMAKL*GIPVSS
Trigger: TGATGAAACAGGGATACCTCACAGCTTGGCCATTTG...CACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTCCTTGAGCTCCTCGTaGAGCTGGTCCATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: NFEANYSQSRGQAQQDAVSLSSS*SWSIRQ
Trigger: CTGCCTGATGGACCAGCTGCACGAGGAGCTCAAGGA...CACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GAAAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCGGTGGTGGACGGGGCTaGAGGGGCGAGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ESLSSLASAREAAFASNGGGGRG*RGERSC
Trigger: GCAGCTCCTCTCGCCCCTGCAGCCCCGTCCACCACC...GCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGGCAACCGCAGGACTTTaGAGTACTTCACTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: PGALVPCCAQWLPPLSIQATAGL*STSLRS
Trigger: GGAACGGAGTGAAGTACTGCAAAGTCCTGCGGTTGC...CTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AGACAGCACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCAGCGCTTTAGGTGAATaGACAGGATCTCGGGCAACC +
Preference number: 4 (lower is better)
Translates to: RQHRHGARSQPAQKPLCVSALGE*TGSRAT
Trigger: GGTTGCCCGAGATCCTGTGCATTCACCTAAAGCGCT...GACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGTGCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp ATCGGGCTCCAGGGACAAAGCTGGGCCGAGCTAGCAAGAGGACAGTTGTGGGGGAGCGCTTTAGGTGAATaGACAGGATCTCGGGCAACC +
Preference number: 4 (lower is better)
Translates to: IGLQGQSWAELARGQLWGSALGE*TGSRAT
Trigger: GGTTGCCCGAGATCCTGTGCATTCACCTAAAGCGCT...CCCCCACAACTGTCCTCTTGCTAGCTCGGCCCAGCTTTGTCCCTGGAGCCCGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp ATCGGGCTCCAGGGACAAAGCTGGGCCGAGCTAGCAAGAGGACAGTTGTGGGGGGCATGGCCTCCTCGCTaGTCTTCCTGTAGAAGAGTA +
Preference number: 4 (lower is better)
Translates to: IGLQGQSWAELARGQLWGAWPPR*SSCRRV
Trigger: TACTCTTCTACAGGAAGAGCAGCGAGGAGGCCATGC...CCCCCACAACTGTCCTCTTGCTAGCTCGGCCCAGCTTTGTCCCTGGAGCCCGAT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GACTCTGGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGGCTTCCTTTGACCTGTaGAATCCTGCTGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: DSGPGRSLCLTGVASGSRASFDL*NPAVVN
Trigger: ATTGACAACAGCAGGATTGCACAGGTCAAAGGAAGC...CCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCCAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AGACAGCACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCCCAGAGTCTTCAGTCTaGAGGAGAAGTGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: RQHRHGARSQPAQKPLCVPESSV*RRSAES
Trigger: GCTCTCAGCACTTCTCCTGCAGACTGAAGACTCTGG...GACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGTGCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAGCAAATTTCCTGAGCGCTGCACCCTaGACAGCCCCCACATCCCTC +
Preference number: 4 (lower is better)
Translates to: VRYPCFIIRFPGGGSANFLSAAP*TAPTSL
Trigger: GAGGGATGTGGGGGCTGTGCAGGGTGCAGCGCTCAG...GAAATTTGCTGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAGCAAATTTCTCTGCGTCGCGACAGTaGAGCGTGCGGCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: VRYPCFIIRFPGGGSANFSASRQ*SVRPLA
Trigger: AGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGA...GAAATTTGCTGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ACTGCTGAACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGAGCCTGGGCTCACCTCTaGGTGACACGAAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: TAELRGKLQPIQGAGSAGAWAHL*VTRSPQ
Trigger: CTGTGGGCTTCGTGTCACCCAGAGGTGAGCCCAGGC...TCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTTCAGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ATCGGGCTCCAGGGACAAAGCTGGGCCGAGCTAGCAAGAGGACAGTTGTGGGGGACCACAGTCGGAACGTaGTCAGGTTCACGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: IGLQGQSWAELARGQLWGTTVGT*SGSRSS
Trigger: ACTTGACCGTGAACCTGACCACGTTCCGACTGTGGT...CCCCCACAACTGTCCTCTTGCTAGCTCGGCCCAGCTTTGTCCCTGGAGCCCGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GACAGTTGTGGGGGACACAACGATGACAGTGACTGGCAGAGGCACTGCCAGGACCGTCAAGGGCAGCCATaGCAGTGTCCACATCAGCGT +
Preference number: 4 (lower is better)
Translates to: DSCGGHNDDSDWQRHCQDRQGQP*QCPHQR
Trigger: ACGCTGATGTGGACACTGCCATGGCTGCCCTTGACG...GTCCTGGCAGTGCCTCTGCCAGTCACTGTCATCGTTGTGTCCCCCACAACTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GAAAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCGCATGGCCCTCGTGGTaGTGGACGGGGCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ESLSSLASAREAAFASNGAWPSW*WTGLQG
Trigger: CCCCTGCAGCCCCGTCCACCACCACGAGGGCCATGC...GCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGGCACATTCTGGTAGATaGCTGAATGGAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: TDMGPDPSLHRSLSASRQAHSGR*LNGAWP
Trigger: TGGCCAAGCTCCATTCAGCCATCTACCAGAATGTGC...CTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGAGGGGGAAGGAGACGTaGCTGTTGATCTTGAATGAG +
Preference number: 4 (lower is better)
Translates to: APRPGGFSRGFGALLCSVRGKET*LLILNE
Trigger: CTCATTCAAGATCAACAGCCACGTCTCCTTCCCCCT...CACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACATACTTCTGTGACGTACTaGTCATCAAACTCGTACCAC +
Preference number: 4 (lower is better)
Translates to: AARPLFWAQTRLPRGGAHTSVTY*SSNSYH
Trigger: GTGGTACGAGTTTGATGACCAGTACGTCACAGAAGT...ATGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGGCCTCGATCTCCACCTaGCAGATGGAGCACACGTAC +
Preference number: 4 (lower is better)
Translates to: NFEANYSQSRGQAQQDAVASIST*QMEHTY
Trigger: GTACGTGTGCTCCATCTGCCAGGTGGAGATCGAGGC...CACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AACCAAACCAACTTTTCTGCCTCTTTACACGGCGGGGTTCTGCAGCAGCCCGGCCGATCCTCCTGCGCTTaGCCAGTGCCTCGATCTCCA +
Preference number: 4 (lower is better)
Translates to: NQTNFSASLHGGVLQQPGRSSCA*PVPRSP
Trigger: TGGAGATCGAGGCACTGGCCAAGCGCAGGAGGATCG...GCCGGGCTGCTGCAGAACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTGCTCCCTGCTTCAGCTaGACATGGCCGCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LVPCCAQWLPPLSIQRLLAPCFS*TWPLPL
Trigger: CAAAGGAAGCGGCCATGTCCAGCTGAAGCAGGGAGC...AAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAAGAAACATCCCCCACTaGCAGAAATCCAACCTCCTC +
Preference number: 4 (lower is better)
Translates to: VAPRPGGFSRGFGALLCSRNIPH*QKSNLL
Trigger: GAGGAGGTTGGATTTCTGCCAGTGGGGGATGTTTCT...TGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGTCTTCGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTTGCCTTTGCCTCAAATaGCCAAGCTGTGAGGTATCC +
Preference number: 4 (lower is better)
Translates to: SLRGSGPIAQWRRREAAACLCLK*PSCEVS
Trigger: GGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCA...AGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCGAAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp AACCAAACCAACTTTTCTGCCTCTTTACACGGCGGGGTTCTGCAGCAGCCCGGCGGAGGTCGTAGGTGGTaGTCTGGGATGTGCACTCCT +
Preference number: 4 (lower is better)
Translates to: NQTNFSASLHGGVLQQPGGGRRW*SGMCTP
Trigger: AGGAGTGCACATCCCAGATCACCACCTACGACCTCC...GCCGGGCTGCTGCAGAACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCAGAGGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTACCAGGGAGGACCTGTaGGCTCCTCACTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: AEALPGQRPKLTSQSLGRTREDL*APHWPG
Trigger: CCCTGGCCAGTGAGGAGCTCACAGGTCCTCCCTGGT...ACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTTGTTCCAATCAGCAATaGGTCCAGAGTCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: DPSLHRSLSASRQCSVRPCSNQQ*VQSLQS
Trigger: AGACTGAAGACTCTGGACTCATTGCTGATTGGAACA...AGGCCGCACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp ATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCCAAATGGCCAAGCTGTaGGGTATCCCTGTTTCATCA +
Preference number: 4 (lower is better)
Translates to: MVAPRPGGFSRGFGALLCQMAKL*GIPVSS
Trigger: TGATGAAACAGGGATACCTCACAGCTTGGCCATTTG...GCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GACAGTTGTGGGGGACACAACGATGACAGTGACTGGCAGAGGCACTGCCAGGACAGGGGCGAGAGGAGCTaGGTAGGTGAGCATCATTGT +
Preference number: 4 (lower is better)
Translates to: DSCGGHNDDSDWQRHCQDRGERS*VGEHHC
Trigger: ACAATGATGCTCACCTACGCAGCTCCTCTCGCCCCT...GTCCTGGCAGTGCCTCTGCCAGTCACTGTCATCGTTGTGTCCCCCACAACTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GCAGAGGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTCGATGTAGTGCCCACTaGCTGCCGTGCCGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: AEALPGQRPKLTSQSLGRRCSAH*LPCRGG
Trigger: GCCACCACGGCACGGCAGGCAGTGGGCACTACATCG...ACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AGTCTTCGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTTCAAACTCGTACCACTaGCCATTGATCACGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLRGSGPIAQWRRREAAASNSYH*PLITFW
Trigger: CCAGAACGTGATCAATGGGCAGTGGTACGAGTTTGA...AGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCGAAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTGGCCCAGGCCGCAGCGCTTCCTTTGACCTGTaGAATCCTGCTGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: SGDAVKQQLLPDSGPGRSASFDL*NPAVVN
Trigger: ATTGACAACAGCAGGATTGCACAGGTCAAAGGAAGC...GCTGCGGCCTGGGCCAGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAACGCGACAGTGCAGCGTaGGGCCTCTGGCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: GTARTKTQINVTESWSFQRDSAA*GLWLQR
Trigger: GCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCG...TTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAGCAAATTTCGAGGGCAAAGGTCCCTaGAGTCCCCCATCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VRYPCFIIRFPGGGSANFEGKGP*SPPSWP
Trigger: AGGCCAGGATGGGGGACTCCAGGGACCTTTGCCCTC...GAAATTTGCTGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTGGTCACCTCTCCTATaGAGTCAAGGTGAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: VLSGSLHSASRGCFPGSTWSPLL*SQGEGK
Trigger: TTTGCCCTCACCTTGACTCCATAGGAGAGGTGACCA...GGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGTTGCCTGTGCATGAATaGTGCTGTGGTCAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PGALVPCCAQWLPPLSIQLPVHE*CCGQQR
Trigger: CCTTTGCTGACCACAGCACCATTCATGCACAGGCAA...CTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTGGGGGACCATAGCCTCGGAACATTaGGTTGACCAACTTGATCCC +
Preference number: 4 (lower is better)
Translates to: ANYSQSRGQAQQDAVWGTIASEH*VDQLDP
Trigger: GGGATCAAGTTGGTCAACCCAATGTTCCGAGGCTAT...GGTCCCCCACACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AGTCTTCGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTATAGCCTCGGAACATTaGGTTGACCAACTTGATCCC +
Preference number: 4 (lower is better)
Translates to: SLRGSGPIAQWRRREAAAIASEH*VDQLDP
Trigger: GGGATCAAGTTGGTCAACCCAATGTTCCGAGGCTAT...AGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCGAAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTGGCAGTGATAAGTCCTaGAACGTTTCCACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: PGQSHSGDAVKQQLLPDSGSDKS*NVSTVV
Trigger: CACCACAGTGGAAACGTTCCAGGACTTATCACTGCC...AGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGGGCAGTGATAAGTCCTaGAACGTTTCCACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: PGALVPCCAQWLPPLSIQGSDKS*NVSTVV
Trigger: CACCACAGTGGAAACGTTCCAGGACTTATCACTGCC...CTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCGCACATTCTGGTAGATaGCTGAATGGAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: VLSGSLHSASRGCFPGSTAHSGR*LNGAWP
Trigger: TGGCCAAGCTCCATTCAGCCATCTACCAGAATGTGC...GGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGGCGGGGTTCTGCCCTGCCGTGCCGTGGTaGCAGATGACCGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ALLQTKPTFLPLYTAGFCPAVPW*QMTERR
Trigger: CCTCCTCTCGGTCATCTGCCACCACGGCACGGCAGG...GCAGAACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGGCGGGGTTCTGCCTGCCTGCCGTGCCGTaGTGGCAGATGACCGAGAGG +
Preference number: 4 (lower is better)
Translates to: ALLQTKPTFLPLYTAGFCLPAVP*WQMTER
Trigger: CCTCTCGGTCATCTGCCACCACGGCACGGCAGGCAG...GCAGAACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCAAGAACCGCAGCAGGCTaGGCTCCCGCATGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: KSVFFSISSGSCLCLKWPRTAAG*APAWRP
Trigger: TGGCCGCCATGCGGGAGCCCAGCCTGCTGCGGTTCT...TGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ACTGCTGAACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGAGAGCAGAGGAAGGTCTaGTTGGTGATGGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TAELRGKLQPIQGAGSAGEQRKV*LVMGPG
Trigger: GCCAGGCCCCATCACCAACCAGACCTTCCTCTGCTC...TCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTTCAGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCAAGCGGCGGGATGCCTCCGTaGGAGCAGAGGAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SVFFSISSGSCLCLKWPSGGMPP*EQRKVW
Trigger: CCAGACCTTCCTCTGCTCCCACGGAGGCATCCCGCC...GCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCTGCCTTTGCCTCAAATGGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGCCACACTCTGGCGGATaGCAATCTCGGGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: AAFASNGQAVRYPCFIIRPHSGG*QSRGHL
Trigger: GAGGTGGCCCCGAGATTGCCATCCGCCAGAGTGTGG...CCGGATGATGAAACAGGGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGACATGTGAGGGTCTCTaGAGAGTGAGGAGAGGACCC +
Preference number: 4 (lower is better)
Translates to: NFEANYSQSRGQAQQDAVTCEGL*RVRRGP
Trigger: GGGTCCTCTCCTCACTCTCCAGAGACCCTCACATGT...CACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315480.9
CDS-3UTR CCA 90 bp AGACAGCACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCAGAAACATCCCCCACTaGCAGAAATCCAACCTCCTC +
Preference number: 4 (lower is better)
Translates to: RQHRHGARSQPAQKPLCVRNIPH*QKSNLL
Trigger: GAGGAGGTTGGATTTCTGCCAGTGGGGGATGTTTCT...GACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGTGCTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTTGCCTTTGCCTCAAATaGCCAAGCTGTGAGGTATCC +
Preference number: 4 (lower is better)
Translates to: PGQSHSGDAVKQQLLPDSCLCLK*PSCEVS
Trigger: GGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCA...AGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ACTGCTGAACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGGCTTTCAGAAGGCTaGGGCCAATGCCAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: TAELRGKLQPIQGAGSAGRLSEG*GQCQGN
Trigger: GTTCCCCTGGCATTGGCCCCAGCCTTCTGAAAGCCG...TCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTTCAGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp AACCAAACCAACTTTTCTGCCTCTTTACACGGCGGGGTTCTGCAGCAGCCCGGCATTCGCATCCTTTGTTaGCAGCTGACAGCGACGGGC +
Preference number: 4 (lower is better)
Translates to: NQTNFSASLHGGVLQQPGIRILC*QLTATG
Trigger: GCCCGTCGCTGTCAGCTGTCAACAAAGGATGCGAAT...GCCGGGCTGCTGCAGAACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp TTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCAGGTCATCGTCCTCTaGCTCAGACTCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: LVPCCAQWLPPLSIQRLLQVIVL*LRLSFI
Trigger: GATGAAGGAGAGTCTGAGTCAGAGGACGATGACCTG...AAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp AAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCACCACCACCGGCTCCTTaGGCTCCTCGTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KSVFFSISSGSCLCLKWPPPPAP*APRAAG
Trigger: ACCAGCTGCACGAGGAGCTCAAGGAGCCGGTGGTGG...TGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAGCAAATTTCGGATGTACTCCACAATaGAGGCCAGCCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VRYPCFIIRFPGGGSANFGCTPQ*RPASPG
Trigger: CCCAGGGCTGGCTGGCCTTCATTGTGGAGTACATCC...GAAATTTGCTGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp TCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCAAGCCGTTGTCCTTCCCCTTaGCGAACGCCTCCCACTCCC +
Preference number: 4 (lower is better)
Translates to: SVFFSISSGSCLCLKWPSRCPSP*RTPPTP
Trigger: GGGAGTGGGAGGCGTTCGTCAAGGGGAAGGACAACG...GCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp CCCGTCTGCTTTGATCCTGATGATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGTTCAAAAGGACATGTaGGGGTCTCTGGAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: PVCFDPDDGRTSPWRFLQVQKDM*GSLESE
Trigger: CTCACTCTCCAGAGACCCTCACATGTCCTTTTGAAC...CTGGAGAAACCGCCAGGGCGAGGTGCGACCATCATCAGGATCAAAGCAGACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315480.9
CDS-3UTR TCA 90 bp GTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAGCAAATTTCACAGTGGAGACGCCGTaGAGCAGCAGCTACTCCCTG +
Preference number: 4 (lower is better)
Translates to: VRYPCFIIRFPGGGSANFTVETP*SSSYSL
Trigger: CAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGT...GAAATTTGCTGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGTGTTCCAATCAGCAATaGGTCCAGAGTCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: APRPGGFSRGFGALLCSVCSNQQ*VQSLQS
Trigger: AGACTGAAGACTCTGGACTCATTGCTGATTGGAACA...CACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACATATGAAGATGAACTGCTaGACTTCGAGGCAAATTACA +
Preference number: 4 (lower is better)
Translates to: AARPLFWAQTRLPRGGAHMKMNC*TSRQIT
Trigger: TGTAATTTGCCTCGAAGTTCAGCAGTTCATCTTCAT...ATGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CCCGTCTGCTTTGATCCTGATGATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGCTTCTGGTAGCTCTTaGACAGGGCTGGCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: PVCFDPDDGRTSPWRFLQASGSS*TGLASY
Trigger: ATAAGAAGCCAGCCCTGTGCAAGAGCTACCAGAAGC...CTGGAGAAACCGCCAGGGCGAGGTGCGACCATCATCAGGATCAAAGCAGACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GCAGAGGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTGAGCACGTACGACGGTaGCATCCTCACGGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: AEALPGQRPKLTSQSLGREHVRR*HPHGAC
Trigger: GCAAGCCCCGTGAGGATGGCACCGTCGTACGTGCTC...ACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCACGATGTAGTGCCCACTaGCTGCCGTGCCGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: KSVFFSISSGSCLCLKWPRCSAH*LPCRGG
Trigger: GCCACCACGGCACGGCAGGCAGTGGGCACTACATCG...TGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp ACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTATCAGCTCGGGAAGCTaGCTTTGCCTCAAATGGCCA +
Preference number: 4 (lower is better)
Translates to: TSRQITANPGGRLSRTRCISSGS*LCLKWP
Trigger: TGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGAT...ACACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGATCAGCTCGGGAAGCTaGCTTTGCCTCAAATGGCCA +
Preference number: 4 (lower is better)
Translates to: NFEANYSQSRGQAQQDAVISSGS*LCLKWP
Trigger: TGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGAT...CACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCTGCCTTTGCCTCAAATGGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGCACAGGCGCCTGGCTTaGCCGGCACATTCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: AAFASNGQAVRYPCFIIRHRRLA*PAHSGR
Trigger: TCTACCAGAATGTGCCGGCCAAGCCAGGCGCCTGTG...CCGGATGATGAAACAGGGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AACCAAACCAACTTTTCTGCCTCTTTACACGGCGGGGTTCTGCAGCAGCCCGGCTGCACCACCGTCTCGTaGACTTCTGTGACGTACTGG +
Preference number: 4 (lower is better)
Translates to: NQTNFSASLHGGVLQQPGCTTVS*TSVTYW
Trigger: CCAGTACGTCACAGAAGTCCACGAGACGGTGGTGCA...GCCGGGCTGCTGCAGAACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCAGGCGGGATGCCTCCGTaGGAGCAGAGGAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: KSVFFSISSGSCLCLKWPGGMPP*EQRKVW
Trigger: CCAGACCTTCCTCTGCTCCCACGGAGGCATCCCGCC...TGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAGCAAATTTCTGCTCCCAGACGTTCTaGGGCAGGATGACCACCAGG +
Preference number: 4 (lower is better)
Translates to: VRYPCFIIRFPGGGSANFCSQTF*GRMTTR
Trigger: CCTGGTGGTCATCCTGCCCCAGAACGTCTGGGAGCA...GAAATTTGCTGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ACTGCTGAACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGAGCCTCGATCTCCACCTaGCAGATGGAGCACACGTAC +
Preference number: 4 (lower is better)
Translates to: TAELRGKLQPIQGAGSAGASIST*QMEHTY
Trigger: GTACGTGTGCTCCATCTGCCAGGTGGAGATCGAGGC...TCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTTCAGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTTGCTTCAGCTGGACATaGCCGCTTCCTTTGACCTGT +
Preference number: 4 (lower is better)
Translates to: TSRQITANPGGRLSRTRCCFSWT*PLPLTC
Trigger: ACAGGTCAAAGGAAGCGGCCATGTCCAGCTGAAGCA...ACACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTTGCTTCAGCTGGACATaGCCGCTTCCTTTGACCTGT +
Preference number: 4 (lower is better)
Translates to: LVPCCAQWLPPLSIQRLLCFSWT*PLPLTC
Trigger: ACAGGTCAAAGGAAGCGGCCATGTCCAGCTGAAGCA...AAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTGGGGGACCCAGGGACCTGCTCTTTaGATGTTCAAAAGGACATGT +
Preference number: 4 (lower is better)
Translates to: ANYSQSRGQAQQDAVWGTQGPAL*MFKRTC
Trigger: ACATGTCCTTTTGAACATCCAAAGAGCAGGTCCCTG...GGTCCCCCACACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000315480.9
CDS-3UTR CCA 90 bp AAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCAGGGCACATGGGGCTGTaGGGACACGGGCACTCAGCA +
Preference number: 4 (lower is better)
Translates to: KSVFFSISSGSCLCLKWPGHMGL*GHGHSA
Trigger: TGCTGAGTGCCCGTGTCCCCACAGCCCCATGTGCCC...TGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315480.9
CDS-3UTR CCA 90 bp ACTGCTGAACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGAAAAGACGCAGTAGTGTaGGGGGTCTGGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: TAELRGKLQPIQGAGSAGKDAVV*GVWSQS
Trigger: GCTCTGGGACCAGACCCCCCACACTACTGCGTCTTT...TCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTTCAGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAGCAAATTTCCCTATGGAGTCAAGGTaGGGGCAAAGGTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VRYPCFIIRFPGGGSANFPMESR*GQRSLE
Trigger: CTCCAGGGACCTTTGCCCTCACCTTGACTCCATAGG...GAAATTTGCTGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGGCGGGGTTCTGCCGTGTCACTCGAATCTaGGTCCCGAGCCTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: ALLQTKPTFLPLYTAGFCRVTRI*VPSLRQ
Trigger: CTGACGGAGGCTCGGGACTCAGATTCGAGTGACACG...GCAGAACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp TCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCAAGCGGATGTACTCCACAATaGAGGCCAGCCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SVFFSISSGSCLCLKWPSGCTPQ*RPASPG
Trigger: CCCAGGGCTGGCTGGCCTTCATTGTGGAGTACATCC...GCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp AAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCATGCCGTGGTGGCAGATaGCCGAGAGGAGGTCGTAGG +
Preference number: 4 (lower is better)
Translates to: KSVFFSISSGSCLCLKWPCRGGR*PRGGRR
Trigger: CCTACGACCTCCTCTCGGTCATCTGCCACCACGGCA...TGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GAAAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCTGCCGTGGTGGCAGATaGCCGAGAGGAGGTCGTAGG +
Preference number: 4 (lower is better)
Translates to: ESLSSLASAREAAFASNGCRGGR*PRGGRR
Trigger: CCTACGACCTCCTCTCGGTCATCTGCCACCACGGCA...GCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCAGAGGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTACAGTGGAGACGCCGTaGAGCAGCAGCTACTCCCTG +
Preference number: 4 (lower is better)
Translates to: AEALPGQRPKLTSQSLGRTVETP*SSSYSL
Trigger: CAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGT...ACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp ATCGGGCTCCAGGGACAAAGCTGGGCCGAGCTAGCAAGAGGACAGTTGTGGGGGTGTTCCAATCAGCAATaGGTCCAGAGTCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: IGLQGQSWAELARGQLWGCSNQQ*VQSLQS
Trigger: AGACTGAAGACTCTGGACTCATTGCTGATTGGAACA...CCCCCACAACTGTCCTCTTGCTAGCTCGGCCCAGCTTTGTCCCTGGAGCCCGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp CCCGTCTGCTTTGATCCTGATGATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGCAAATGGCCAAGCTGTaGGGTATCCCTGTTTCATCA +
Preference number: 4 (lower is better)
Translates to: PVCFDPDDGRTSPWRFLQQMAKL*GIPVSS
Trigger: TGATGAAACAGGGATACCTCACAGCTTGGCCATTTG...CTGGAGAAACCGCCAGGGCGAGGTGCGACCATCATCAGGATCAAAGCAGACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GAAAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCCTGCGCTTGGCCAGTaGCTCGATCTCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: ESLSSLASAREAAFASNGPALGQ*LDLHLA
Trigger: TGCCAGGTGGAGATCGAGGCACTGGCCAAGCGCAGG...GCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GCAGAGGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTATCTTCTGCTCCCCGTaGAGGTTCTCTGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: AEALPGQRPKLTSQSLGRIFCSP*RFSGPS
Trigger: GCTGGGCCCAGAGAACCTGCACGGGGAGCAGAAGAT...ACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp ACTGCTGAACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACACCCACGCCCCGTCTaGTTTGATCCTGATGATGGT +
Preference number: 4 (lower is better)
Translates to: TAELRGKLQPIQGAGSAGHPRPV*FDPDDG
Trigger: ACCATCATCAGGATCAAAGCAGACGGGGCGTGGGTG...TCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTTCAGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAACAGGCCTCAGGGCCTCTaGGGGACCCACCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: ALPGQRPKLTSQSLGRFNRPQGL*GTHLLE
Trigger: TTCCAGCAGGTGGGTCCCGCAGAGGCCCTGAGGCCT...GTTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GAAAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCTCCCCCATCCTGGCCTaGGCTCACCTCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: ESLSSLASAREAAFASNGSPILA*AHLWVT
Trigger: TGTCACCCAGAGGTGAGCCCAGGCCAGGATGGGGGA...GCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCTGCCTTTGCCTCAAATGGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGCATGAGACAGACTGGTaGGGACCACGTAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: AAFASNGQAVRYPCFIIRHETDW*GPRSLA
Trigger: GGCCAAGCTACGTGGTCCCCACCAGTCTGTCTCATG...CCGGATGATGAAACAGGGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGGCGGGGTTCTGCGCTCCTTCTCAGAGATaGCTCGGCCCGCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: ALLQTKPTFLPLYTAGFCAPSQR*LGPPHL
Trigger: CAGATGAGGCGGGCCGAGCCATCTCTGAGAAGGAGC...GCAGAACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ATCGGGCTCCAGGGACAAAGCTGGGCCGAGCTAGCAAGAGGACAGTTGTGGGGGACTTCTGTGACGTACTaGTCATCAAACTCGTACCAC +
Preference number: 4 (lower is better)
Translates to: IGLQGQSWAELARGQLWGTSVTY*SSNSYH
Trigger: GTGGTACGAGTTTGATGACCAGTACGTCACAGAAGT...CCCCCACAACTGTCCTCTTGCTAGCTCGGCCCAGCTTTGTCCCTGGAGCCCGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTACTTCTGTGACGTACTaGTCATCAAACTCGTACCAC +
Preference number: 4 (lower is better)
Translates to: PGQSHSGDAVKQQLLPDSTSVTY*SSNSYH
Trigger: GTGGTACGAGTTTGATGACCAGTACGTCACAGAAGT...AGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGGCGGGGTTCTGCTGCTCCCAGACGTTCTaGGGCAGGATGACCACCAGG +
Preference number: 4 (lower is better)
Translates to: ALLQTKPTFLPLYTAGFCCSQTF*GRMTTR
Trigger: CCTGGTGGTCATCCTGCCCCAGAACGTCTGGGAGCA...GCAGAACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTAGAAACATCCCCCACTaGCAGAAATCCAACCTCCTC +
Preference number: 4 (lower is better)
Translates to: TSRQITANPGGRLSRTRCRNIPH*QKSNLL
Trigger: GAGGAGGTTGGATTTCTGCCAGTGGGGGATGTTTCT...ACACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ACTGCTGAACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACTGCACTGCTGCTGCTaGGAGGAAGGGAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: TAELRGKLQPIQGAGSAGLHCCC*EEGKVC
Trigger: ACAGACTTTCCCTTCCTCCCAGCAGCAGCAGTGCAG...TCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTTCAGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAGCAAATTTCAAAGACGCAGTAGTGTaGGGGGTCTGGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: VRYPCFIIRFPGGGSANFKDAVV*GVWSQS
Trigger: GCTCTGGGACCAGACCCCCCACACTACTGCGTCTTT...GAAATTTGCTGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAGCAAATTTCTCCTTTGTTGACAGCTaGCAGCGACGGGCTATAGGG +
Preference number: 4 (lower is better)
Translates to: VRYPCFIIRFPGGGSANFSFVDS*QRRAIG
Trigger: CCCTATAGCCCGTCGCTGTCAGCTGTCAACAAAGGA...GAAATTTGCTGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCAGAGGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTCCTATGGAGTCAAGGTaGGGGCAAAGGTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: AEALPGQRPKLTSQSLGRPMESR*GQRSLE
Trigger: CTCCAGGGACCTTTGCCCTCACCTTGACTCCATAGG...ACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCTGCCTTTGCCTCAAATGGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGCAAAGATGTCTGAGATaGCGCTGCGGTAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: AAFASNGQAVRYPCFIIRQRCLR*RCGSAA
Trigger: AGCAGCGCTACCGCAGCGTCATCTCAGACATCTTTG...CCGGATGATGAAACAGGGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGGCGGGGTTCTGCGCCGTCAAAGATGTCTaGGATGACGCTGCGGTAGCG +
Preference number: 4 (lower is better)
Translates to: ALLQTKPTFLPLYTAGFCAVKDV*DDAAVA
Trigger: CGCTACCGCAGCGTCATCTCAGACATCTTTGACGGC...GCAGAACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp ACTGCTGAACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGAGACACTGCACAAGGCTaGGAATGGAGCCGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: TAELRGKLQPIQGAGSAGDTAQG*EWSRQR
Trigger: TCTTTGACGGCTCCATTCTCAGCCTTGTGCAGTGTC...TCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGTTCAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AACCAAACCAACTTTTCTGCCTCTTTACACGGCGGGGTTCTGCAGCAGCCCGGCGCTTCTGGTAGCTCTTaGACAGGGCTGGCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: NQTNFSASLHGGVLQQPGASGSS*TGLASY
Trigger: ATAAGAAGCCAGCCCTGTGCAAGAGCTACCAGAAGC...GCCGGGCTGCTGCAGAACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GCAGAGGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTCCTTGAGCTCCTCGTaGAGCTGGTCCATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AEALPGQRPKLTSQSLGRSLSSS*SWSIRQ
Trigger: CTGCCTGATGGACCAGCTGCACGAGGAGCTCAAGGA...ACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GCAGAGGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTGCGTCCTCGTCCACTTaGTCCGAGTTTGTACGCTGC +
Preference number: 4 (lower is better)
Translates to: AEALPGQRPKLTSQSLGRASSST*SEFVRC
Trigger: GCAGCGTACAAACTCGGAGCAAGTGGACGAGGACGC...ACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAAGAGCACGTACGACGGTaGCATCCTCACGGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GTARTKTQINVTESWSFQEHVRR*HPHGAC
Trigger: GCAAGCCCCGTGAGGATGGCACCGTCGTACGTGCTC...TTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GAAAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCGATCTCGATCCTCCTaGGCTTGGCCAGTGCCTCGA +
Preference number: 4 (lower is better)
Translates to: ESLSSLASAREAAFASNGRSRSS*AWPVPR
Trigger: TCGAGGCACTGGCCAAGCGCAGGAGGATCGAGATCG...GCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GCTGCCTTTGCCTCAAATGGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGTCGGCTTCGATCTTCTaGTCCCCGTGCAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: AAFASNGQAVRYPCFIIRSASIF*SPCRFS
Trigger: AGAGAACCTGCACGGGGAGCAGAAGATCGAAGCCGA...CCGGATGATGAAACAGGGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAACGGGGTCTGGAGTGAGTaGAGGCCTCTGGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: ALPGQRPKLTSQSLGRFNGVWSE*RPLARS
Trigger: GCTCCTTGCCAGAGGCCTCCACTCACTCCAGACCCC...GTTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GACAGTTGTGGGGGACACAACGATGACAGTGACTGGCAGAGGCACTGCCAGGACATAGCCTCGGAACATTaGGTTGACCAACTTGATCCC +
Preference number: 4 (lower is better)
Translates to: DSCGGHNDDSDWQRHCQDIASEH*VDQLDP
Trigger: GGGATCAAGTTGGTCAACCCAATGTTCCGAGGCTAT...GTCCTGGCAGTGCCTCTGCCAGTCACTGTCATCGTTGTGTCCCCCACAACTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAACTCGGCCCGCCTCATCTaGGATCAGCAGCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: ALPGQRPKLTSQSLGRFNSARLI*DQQLRL
Trigger: GAGACGGAGCTGCTGATCCCAGATGAGGCGGGCCGA...GTTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGGGCTGGGCTCCCGCATaGCGGCCAGGGACACCACCT +
Preference number: 4 (lower is better)
Translates to: FLVAALLQTKPTFLPLYTGWAPA*RPGTPP
Trigger: AGGTGGTGTCCCTGGCCGCCATGCGGGAGCCCAGCC...CGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCAGAGGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTGGCGACTCCTCGGCCTaGAAGGCCTTGTTCAACTTG +
Preference number: 4 (lower is better)
Translates to: AEALPGQRPKLTSQSLGRGDSSA*KALFNL
Trigger: CAAGTTGAACAAGGCCTTCCAGGCCGAGGAGTCGCC...ACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAGCAAATTTCGTGACCCCACACGACTaGCAGGTTCCCTTAGATTTG +
Preference number: 4 (lower is better)
Translates to: VRYPCFIIRFPGGGSANFVTPHD*QVPLDL
Trigger: CAAATCTAAGGGAACCTGTCAGTCGTGTGGGGTCAC...GAAATTTGCTGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAGCAAATTTCATTCTGGTAGATGGCTaGATGGAGCTTGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: VRYPCFIIRFPGGGSANFILVDG*MELGQV
Trigger: GACCTGGCCAAGCTCCATTCAGCCATCTACCAGAAT...GAAATTTGCTGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGGCGGGGTTCTGCCATGGCCGCTTCCTTTaGCCTGTGCAATCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ALLQTKPTFLPLYTAGFCHGRFL*PVQSCC
Trigger: ACAGCAGGATTGCACAGGTCAAAGGAAGCGGCCATG...GCAGAACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAACATTTGTGGGGCGGGATaGCTCCGTGGGAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: ALPGQRPKLTSQSLGRFNICGAG*LRGSRG
Trigger: TCCTCTGCTCCCACGGAGGCATCCCGCCCCACAAAT...GTTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGTCTGGGCCCAGCGGCTaGGCCACACTCTGGCGGATG +
Preference number: 4 (lower is better)
Translates to: FLVAALLQTKPTFLPLYTSGPSG*ATLWRM
Trigger: CATCCGCCAGAGTGTGGCGCAGCCGCTGGGCCCAGA...CGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGGCGGGGTTCTGCCACCCACGCCCCGTCTaGTTTGATCCTGATGATGGT +
Preference number: 4 (lower is better)
Translates to: ALLQTKPTFLPLYTAGFCHPRPV*FDPDDG
Trigger: ACCATCATCAGGATCAAAGCAGACGGGGCGTGGGTG...GCAGAACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAAGCACAGAAGCCTCTCTaGGTCGCGACAGTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: GTARTKTQINVTESWSFQAQKPL*VATVQR
Trigger: ACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGC...TTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCAAGCTGGCTGAATGGAGCTTaGCCAGGTCCTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SVFFSISSGSCLCLKWPSWLNGA*PGPPFQ
Trigger: CTGGAAAGGAGGACCTGGCCAAGCTCCATTCAGCCA...GCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAGCAAATTTCTGCTTCAGCTGGACATaGCCGCTTCCTTTGACCTGT +
Preference number: 4 (lower is better)
Translates to: VRYPCFIIRFPGGGSANFCFSWT*PLPLTC
Trigger: ACAGGTCAAAGGAAGCGGCCATGTCCAGCTGAAGCA...GAAATTTGCTGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTGCACAGCAGGACGCGGTGTaGGGGACCAGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GRFNKPEVHIFSSCSVTAQQDAV*GTSCLQ
Trigger: CTGGAGGCAGCTGGTCCCCCACACCGCGTCCTGCTG...TGCAGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCTGCCTTTGCCTCAAATGGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGCATCATCCGGTTCCCTaGTGGGGGCTCAGCAAATTT +
Preference number: 4 (lower is better)
Translates to: AAFASNGQAVRYPCFIIRHHPVP*WGLSKF
Trigger: AAATTTGCTGAGCCCCCACCAGGGAACCGGATGATG...CCGGATGATGAAACAGGGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTGCAGCAGCGTGCGGCCTCTaGCTGCAGCGCCGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: GRFNKPEVHIFSSCSVTAAACGL*LQRRLS
Trigger: TGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGC...TGCAGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGGCGGGGTTCTGCCAGGTCATCGTCCTCTaGCTCAGACTCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: ALLQTKPTFLPLYTAGFCQVIVL*LRLSFI
Trigger: GATGAAGGAGAGTCTGAGTCAGAGGACGATGACCTG...GCAGAACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAACGCCGTCAAAGATGTCTaGGATGACGCTGCGGTAGCG +
Preference number: 4 (lower is better)
Translates to: ALPGQRPKLTSQSLGRFNAVKDV*DDAAVA
Trigger: CGCTACCGCAGCGTCATCTCAGACATCTTTGACGGC...GTTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp AAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCACGAAAGCGCTTTAGGTaGATGCACAGGATCTCGGGC +
Preference number: 4 (lower is better)
Translates to: KSVFFSISSGSCLCLKWPRKRFR*MHRISG
Trigger: GCCCGAGATCCTGTGCATTCACCTAAAGCGCTTTCG...TGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GAAAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCGAAAGCGCTTTAGGTaGATGCACAGGATCTCGGGC +
Preference number: 4 (lower is better)
Translates to: ESLSSLASAREAAFASNGRKRFR*MHRISG
Trigger: GCCCGAGATCCTGTGCATTCACCTAAAGCGCTTTCG...GCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCAAGCCATCCTCCAGGAAGGTaGTTTCAGGGACCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SVFFSISSGSCLCLKWPSHPPGR*FQGPAL
Trigger: AAGAGCAGGTCCCTGAAAGCACCTTCCTGGAGGATG...GCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315480.9
CDS-3UTR GCA 90 bp GCTGCCTTTGCCTCAAATGGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGCCAAACCAACTTTTCTaGCTCTTTACACGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: AAFASNGQAVRYPCFIIRPNQLF*LFTRRG
Trigger: ACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGG...CCGGATGATGAAACAGGGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TCACAGAGTCTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCGGCCCGGAACTCACCTaGACTCGCAACTGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: SQSLGRFNKPEVHIFSSCGPELT*TRNCAA
Trigger: GGCGGCGCAGTTGCGAGTGCAGGTGAGTTCCGGGCC...GCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAGACTCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358355.5
CDS-3UTR GCA 90 bp TCACAGAGTCTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCGGCTGGGGTCGCCAATaGTCAGAGGCCCGGCCCACA +
Preference number: 4 (lower is better)
Translates to: SQSLGRFNKPEVHIFSSCGWGRQ*SEARPT
Trigger: TGTGGGCCGGGCCTCTGAGCATTGGCGACCCCAGCC...GCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAGACTCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358355.5
CDS-3UTR CCA 90 bp GGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTGCATCAGCGGCGGGCAATTaGACAGGGCCTGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GRFNKPEVHIFSSCSVTASAAGN*TGPAGQ
Trigger: CTGCCCTGCAGGCCCTGTCCAATTGCCCGCCGCTGA...TGCAGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAACCGTCAAGGGCAGCCATaGCAGTGTCCACATCAGCGT +
Preference number: 4 (lower is better)
Translates to: ALPGQRPKLTSQSLGRFNRQGQP*QCPHQR
Trigger: ACGCTGATGTGGACACTGCCATGGCTGCCCTTGACG...GTTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAACGCCTCGATCTCCACCTaGCAGATGGAGCACACGTAC +
Preference number: 4 (lower is better)
Translates to: ALPGQRPKLTSQSLGRFNASIST*QMEHTY
Trigger: GTACGTGTGCTCCATCTGCCAGGTGGAGATCGAGGC...GTTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAAGCTCCCTGCTTCAGCTaGACATGGCCGCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: GTARTKTQINVTESWSFQAPCFS*TWPLPL
Trigger: CAAAGGAAGCGGCCATGTCCAGCTGAAGCAGGGAGC...TTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTGCAGGCTGCGCCACACTCTaGCGGATGGCAATCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GRFNKPEVHIFSSCSVTAGCATL*RMAISG
Trigger: CCCCGAGATTGCCATCCGCCAGAGTGTGGCGCAGCC...TGCAGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTCAGCAGGACGCGGTGTaGGGGACCAGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LGRFNKPEVHIFSSCSVTQQDAV*GTSCLQ
Trigger: CTGGAGGCAGCTGGTCCCCCACACCGCGTCCTGCTG...AGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAACATCCGGTTCCCTGGTaGGGGCTCAGCAAATTTCCC +
Preference number: 4 (lower is better)
Translates to: GTARTKTQINVTESWSFQHPVPW*GLSKFP
Trigger: GGGAAATTTGCTGAGCCCCCACCAGGGAACCGGATG...TTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GAAAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCATTCTGGTAGATGGCTaGATGGAGCTTGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: ESLSSLASAREAAFASNGILVDG*MELGQV
Trigger: GACCTGGCCAAGCTCCATTCAGCCATCTACCAGAAT...GCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCAGAGGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTGCTGTTGATCTTGAATaGGTACATCACCTCGTGCCG +
Preference number: 4 (lower is better)
Translates to: AEALPGQRPKLTSQSLGRAVDLE*VHHLVP
Trigger: CGGCACGAGGTGATGTACTCATTCAAGATCAACAGC...ACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTGCACGTTGTCCTTCCCCTTaGCGAACGCCTCCCACTCCC +
Preference number: 4 (lower is better)
Translates to: GRFNKPEVHIFSSCSVTARCPSP*RTPPTP
Trigger: GGGAGTGGGAGGCGTTCGTCAAGGGGAAGGACAACG...TGCAGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAATGAAGATGAACTGCTaGACTTCGAGGCAAATTACA +
Preference number: 4 (lower is better)
Translates to: GQAVRYPCFIIRFPGGGSMKMNC*TSRQIT
Trigger: TGTAATTTGCCTCGAAGTTCAGCAGTTCATCTTCAT...TGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCACAGCTTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTAGGCCTCAGGGCCTCTaGGGGACCCACCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LGRFNKPEVHIFSSCSVTRPQGL*GTHLLE
Trigger: TTCCAGCAGGTGGGTCCCGCAGAGGCCCTGAGGCCT...AGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGGCGGGGTTCTGCGGCAGTGATAAGTCCTaGAACGTTTCCACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: ALLQTKPTFLPLYTAGFCGSDKS*NVSTVV
Trigger: CACCACAGTGGAAACGTTCCAGGACTTATCACTGCC...GCAGAACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTGCAGCCCGGCCTCTCTTCTaGGCACAAACACGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: GRFNKPEVHIFSSCSVTAARPLF*AQTRLP
Trigger: CGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGC...TGCAGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TCACAGAGTCTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCGAGCACGTACGACGGTaGCATCCTCACGGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: SQSLGRFNKPEVHIFSSCEHVRR*HPHGAC
Trigger: GCAAGCCCCGTGAGGATGGCACCGTCGTACGTGCTC...GCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAGACTCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TCACAGAGTCTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCGCCTGGGCTCACCTCTaGGTGACACGAAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: SQSLGRFNKPEVHIFSSCAWAHL*VTRSPQ
Trigger: CTGTGGGCTTCGTGTCACCCAGAGGTGAGCCCAGGC...GCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAGACTCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTGAGGGCAAAGGTCCCTaGAGTCCCCCATCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LGRFNKPEVHIFSSCSVTEGKGP*SPPSWP
Trigger: AGGCCAGGATGGGGGACTCCAGGGACCTTTGCCCTC...AGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCATTGCCTGTGCATGAATaGTGCTGTGGTCAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: KSVFFSISSGSCLCLKWPLPVHE*CCGQQR
Trigger: CCTTTGCTGACCACAGCACCATTCATGCACAGGCAA...TGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ATATTTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTATGGGCCTCCGCGGGCTaGTCGTCAAGGGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: IFSSCSVTANQTNFSASLWASAG*SSRAAM
Trigger: CATGGCTGCCCTTGACGACCAGCCCGCGGAGGCCCA...TAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GAAAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCGCACATTCTGGTAGATaGCTGAATGGAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: ESLSSLASAREAAFASNGAHSGR*LNGAWP
Trigger: TGGCCAAGCTCCATTCAGCCATCTACCAGAATGTGC...GCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGGCGGGACCCACCTGCTaGAATTTCCACCACCACCTG +
Preference number: 4 (lower is better)
Translates to: FLVAALLQTKPTFLPLYTAGPTC*NFHHHL
Trigger: CAGGTGGTGGTGGAAATTCCAGCAGGTGGGTCCCGC...CGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGCGGCTTTCAGAAGGCTaGGGCCAATGCCAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: FLVAALLQTKPTFLPLYTRLSEG*GQCQGN
Trigger: GTTCCCCTGGCATTGGCCCCAGCCTTCTGAAAGCCG...CGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TCACAGAGTCTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCCTCTGGCAAGGAGCCTaGCGAAGCCAGGCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: SQSLGRFNKPEVHIFSSCLWQGA*RSQALS
Trigger: TGACAGGGCCTGGCTTCGCCAGGCTCCTTGCCAGAG...GCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAGACTCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358355.5
CDS-3UTR TCA 90 bp TTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGATAGGTTTGGTCCGGTaGCCCCACACGACTGACAGG +
Preference number: 4 (lower is better)
Translates to: FLVAALLQTKPTFLPLYTIGLVR*PHTTDR
Trigger: CCTGTCAGTCGTGTGGGGTCACCGGACCAAACCTAT...CGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp TTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGGAGGAGCTGCGTAGGTaGGCATCATTGTCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: FLVAALLQTKPTFLPLYTEELRR*ASLSGS
Trigger: AGAGCCGGACAATGATGCTCACCTACGCAGCTCCTC...CGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GAAAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCTCTCGTGGACTTCTGTaGCGTACTGGTCATCAAACT +
Preference number: 4 (lower is better)
Translates to: ESLSSLASAREAAFASNGSRGLL*RTGHQT
Trigger: AGTTTGATGACCAGTACGTCACAGAAGTCCACGAGA...GCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp CTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTCTGCAGGAGAAGTGCTaGGAGCAGCCCGGGACTTCA +
Preference number: 4 (lower is better)
Translates to: LGRFNKPEVHIFSSCSVTLQEKC*EQPGTS
Trigger: TGAAGTCCCGGGCTGCTCTCAGCACTTCTCCTGCAG...AGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTATTTGTGGGGCGGGATaGCTCCGTGGGAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LGRFNKPEVHIFSSCSVTICGAG*LRGSRG
Trigger: TCCTCTGCTCCCACGGAGGCATCCCGCCCCACAAAT...AGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TCACAGAGTCTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCATCTTCTGCTCCCCGTaGAGGTTCTCTGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SQSLGRFNKPEVHIFSSCIFCSP*RFSGPS
Trigger: GCTGGGCCCAGAGAACCTGCACGGGGAGCAGAAGAT...GCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAGACTCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAACCAAACCAACTTTTCTaGCTCTTTACACGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: GTARTKTQINVTESWSFQPNQLF*LFTRRG
Trigger: ACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGG...TTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTGCATGGGCTCTGCACTGCTaGTGCTGGGAGGAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: GRFNKPEVHIFSSCSVTAWALHC*CWEEGK
Trigger: TTTCCCTTCCTCCCAGCAGCAGCAGTGCAGAGCCCA...TGCAGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAAGCAGCAAGTCCTCTTTaGTCACCTCTCCTATGGAGT +
Preference number: 4 (lower is better)
Translates to: GTARTKTQINVTESWSFQAASPL*SPLLWS
Trigger: ACTCCATAGGAGAGGTGACCAAAGAGGACTTGCTGC...TTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGGAGTTTGTACGCTGCTaGCCCCAGGAGAACTTGCGG +
Preference number: 4 (lower is better)
Translates to: FLVAALLQTKPTFLPLYTEFVRC*PQENLR
Trigger: CCGCAAGTTCTCCTGGGGCCAGCAGCGTACAAACTC...CGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAACCTCCTTTCCAGGAATaGGCAGTGATAAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GTARTKTQINVTESWSFQPPFQE*AVISPG
Trigger: TCCAGGACTTATCACTGCCCATTCCTGGAAAGGAGG...TTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ATATTTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTAGGCGGGATGCCTCCGTaGGAGCAGAGGAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: IFSSCSVTANQTNFSASLGGMPP*EQRKVW
Trigger: CCAGACCTTCCTCTGCTCCCACGGAGGCATCCCGCC...TAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ATATTTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTAGGTCGCACCTCGCCCTaGCGGTTTCTCCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: IFSSCSVTANQTNFSASLGRTSP*RFLQGL
Trigger: AAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACC...TAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp ATATTTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTAGGGCTCACCTCTGGGTaGCACGAAGCCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: IFSSCSVTANQTNFSASLGLTSG*HEAHRK
Trigger: CTTCCTGTGGGCTTCGTGTCACCCAGAGGTGAGCCC...TAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTGCACAAGAACTCATCTTCTaGTGGGCTCCGGTCACCCTC +
Preference number: 4 (lower is better)
Translates to: GRFNKPEVHIFSSCSVTAQELIF*WAPVTL
Trigger: GAGGGTGACCGGAGCCCATCAGAAGATGAGTTCTTG...TGCAGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp CTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTGAGGAGCTGCGTAGGTaGGCATCATTGTCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: LGRFNKPEVHIFSSCSVTEELRR*ASLSGS
Trigger: AGAGCCGGACAATGATGCTCACCTACGCAGCTCCTC...AGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp TTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGATACCTGGGCTTTCTTaGGCACGTACGACGGTGCCA +
Preference number: 4 (lower is better)
Translates to: FLVAALLQTKPTFLPLYTIPGLS*ARTTVP
Trigger: TGGCACCGTCGTACGTGCTCAAGAAAGCCCAGGTAT...CGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTGCGTCCTCGTCCACTTaGTCCGAGTTTGTACGCTGC +
Preference number: 4 (lower is better)
Translates to: LGRFNKPEVHIFSSCSVTASSST*SEFVRC
Trigger: GCAGCGTACAAACTCGGAGCAAGTGGACGAGGACGC...AGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCAGTGCTTTCAGGGACCTaGTCTTTGGATGTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: KSVFFSISSGSCLCLKWPVLSGT*SLDVQK
Trigger: CTTTTGAACATCCAAAGAGCAGGTCCCTGAAAGCAC...TGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315480.9
CDS-3UTR GCA 90 bp GGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTGCACACCCACGCCCCGTCTaGTTTGATCCTGATGATGGT +
Preference number: 4 (lower is better)
Translates to: GRFNKPEVHIFSSCSVTAHPRPV*FDPDDG
Trigger: ACCATCATCAGGATCAAAGCAGACGGGGCGTGGGTG...TGCAGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp ATATTTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTAGGCCCGATCCCAGCCTaGACAGAAGCCTCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: IFSSCSVTANQTNFSASLGPIPA*TEASLR
Trigger: ACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCC...TAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ATATTTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTATCCCCCATCCTGGCCTaGGCTCACCTCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: IFSSCSVTANQTNFSASLSPILA*AHLWVT
Trigger: TGTCACCCAGAGGTGAGCCCAGGCCAGGATGGGGGA...TAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp ATATTTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTAACAGCTTTCAGAGGGTaGGAGGGTGGCGGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: IFSSCSVTANQTNFSASLTAFRG*EGGGES
Trigger: GGACTCCCCGCCACCCTCCCACCCTCTGAAAGCTGT...TAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AAGTGCATATATTTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCACACTCTGGCGGATaGCAATCTCGGGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: KCIYFLVAALLQTKPTFLPHSGG*QSRGHL
Trigger: GAGGTGGCCCCGAGATTGCCATCCGCCAGAGTGTGG...CAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAAATATATGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp CTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTTCCGAGTTTGTACGCTaGTGGCCCCAGGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: LGRFNKPEVHIFSSCSVTSEFVR*WPQENL
Trigger: CAAGTTCTCCTGGGGCCAGCAGCGTACAAACTCGGA...AGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGGCAACCGCAGGACTTTaGAGTACTTCACTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: FLVAALLQTKPTFLPLYTATAGL*STSLRS
Trigger: GGAACGGAGTGAAGTACTGCAAAGTCCTGCGGTTGC...CGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp GGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTGCATCGGGAAGCTGCCTTTaGCTCAAATGGCCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: GRFNKPEVHIFSSCSVTASGSCL*LKWPSC
Trigger: ACAGCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGA...TGCAGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGTCGGGAAGCTGCCTTTaGCTCAAATGGCCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: FLVAALLQTKPTFLPLYTSGSCL*LKWPSC
Trigger: ACAGCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGA...CGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp GGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTGCACATCATCCGGTTCCCTaGTGGGGGCTCAGCAAATTT +
Preference number: 4 (lower is better)
Translates to: GRFNKPEVHIFSSCSVTAHHPVP*WGLSKF
Trigger: AAATTTGCTGAGCCCCCACCAGGGAACCGGATGATG...TGCAGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp CTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTCTGCACTGCTGCTGCTaGGAGGAAGGGAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LGRFNKPEVHIFSSCSVTLHCCC*EEGKVC
Trigger: ACAGACTTTCCCTTCCTCCCAGCAGCAGCAGTGCAG...AGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp GCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAACATGAAGATGAACTGCTaGACTTCGAGGCAAATTACA +
Preference number: 4 (lower is better)
Translates to: ALPGQRPKLTSQSLGRFNMKMNC*TSRQIT
Trigger: TGTAATTTGCCTCGAAGTTCAGCAGTTCATCTTCAT...GTTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TCACAGAGTCTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCTGGTCACCTCTCCTATaGAGTCAAGGTGAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: SQSLGRFNKPEVHIFSSCWSPLL*SQGEGK
Trigger: TTTGCCCTCACCTTGACTCCATAGGAGAGGTGACCA...GCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAGACTCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp TCACAGAGTCTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCCCTCCTTTCCAGGAATaGGCAGTGATAAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SQSLGRFNKPEVHIFSSCPPFQE*AVISPG
Trigger: TCCAGGACTTATCACTGCCCATTCCTGGAAAGGAGG...GCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAGACTCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp ATATTTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTAGACACTGCACAAGGCTaGGAATGGAGCCGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: IFSSCSVTANQTNFSASLDTAQG*EWSRQR
Trigger: TCTTTGACGGCTCCATTCTCAGCCTTGTGCAGTGTC...TAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR TCA 90 bp CTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTTCTCGTGGACTTCTGTaGCGTACTGGTCATCAAACT +
Preference number: 4 (lower is better)
Translates to: LGRFNKPEVHIFSSCSVTSRGLL*RTGHQT
Trigger: AGTTTGATGACCAGTACGTCACAGAAGTCCACGAGA...AGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AAGTGCATATATTTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGAATCTGTTGTACAGGTaGTCCCAGACGTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KCIYFLVAALLQTKPTFLNLLYR*SQTFWG
Trigger: GCCCCAGAACGTCTGGGAGCACCTGTACAACAGATT...CAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAAATATATGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp TCACAGAGTCTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCGCTTCCTTTGACCTGTaGAATCCTGCTGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: SQSLGRFNKPEVHIFSSCASFDL*NPAVVN
Trigger: ATTGACAACAGCAGGATTGCACAGGTCAAAGGAAGC...GCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAGACTCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CCA 90 bp AAGTGCATATATTTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGAGGGGGAAGGAGACGTaGCTGTTGATCTTGAATGAG +
Preference number: 4 (lower is better)
Translates to: KCIYFLVAALLQTKPTFLRGKET*LLILNE
Trigger: CTCATTCAAGATCAACAGCCACGTCTCCTTCCCCCT...CAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAAATATATGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR GCA 90 bp AAGTGCATATATTTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGTCAAACTCGTACCACTaGCCATTGATCACGTTCTGG +
Preference number: 4 (lower is better)
Translates to: KCIYFLVAALLQTKPTFLSNSYH*PLITFW
Trigger: CCAGAACGTGATCAATGGGCAGTGGTACGAGTTTGA...CAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAAATATATGCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS GCA 90 bp GCGAAGCCAGGCCCTGTCAGCCCGGAGCCGGGCTGGGGTCGCCAATaGTCAGAGGCCCGGCCCACAGAAGCAGCCGGTGGCGGCCCGGAA +
Preference number: 5 (lower is better)
Translates to: AKPGPVSPEPGWGRQ*SEARPTEAAGGGPE
Trigger: TTCCGGGCCGCCACCGGCTGCTTCTGTGGGCCGGGCCTCTGAGCATTGGCGACCCCAGCCCGGCTCCGGGCTGACAGGGCCTGGCTTCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358355.5
CDS TCA 90 bp CCCATTGTCCGGCTCTGGCGTCCGGCAGGGGCTGGAGGACCGTGGTaGCGGGGGCTGGGCCTCCGCGGGCTGGTCGTCAAGGGCAGCCAT +
Preference number: 5 (lower is better)
Translates to: PIVRLWRPAGAGGPW*RGLGLRGLVVKGSH
Trigger: ATGGCTGCCCTTGACGACCAGCCCGCGGAGGCCCAGCCCCCGTCACCACGGTCCTCCAGCCCCTGCCGGACGCCAGAGCCGGACAATGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474895.6
CDS CCA 90 bp GCAAGGAGCCTGGCGAAGCCAGGCCCTGTCAGCCCGGAGCCGGGCTaGGGTCGCCAATGCTCAGAGGCCCGGCCCACAGAAGCAGCCGGT +
Preference number: 5 (lower is better)
Translates to: ARSLAKPGPVSPEPG*GRQCSEARPTEAAG
Trigger: ACCGGCTGCTTCTGTGGGCCGGGCCTCTGAGCATTGGCGACCCCAGCCCGGCTCCGGGCTGACAGGGCCTGGCTTCGCCAGGCTCCTTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358355.5
CDS TCA 90 bp ATCATTGTCCGGCTCTGGCGTCCGGCAGGGGCTGGAGGACCGTGGTaGCGGGGGCTGGGCCTCCGCGGGCTGGTCGTCAAGGGCAGCCAT +
Preference number: 5 (lower is better)
Translates to: IIVRLWRPAGAGGPW*RGLGLRGLVVKGSH
Trigger: ATGGCTGCCCTTGACGACCAGCCCGCGGAGGCCCAGCCCCCGTCACCACGGTCCTCCAGCCCCTGCCGGACGCCAGAGCCGGACAATGAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000491731.1
CDS CCA 90 bp CAGGGGCTGGAGGACCGTGGTGACGGGGGCTGGGCCTCCGCGGGCTaGTCGTCAAGGGCAGCCATGGCAGTGTCCACATCAGCGTCCTCG +
Preference number: 5 (lower is better)
Translates to: QGLEDRGDGGWASAG*SSRAAMAVSTSASS
Trigger: CGAGGACGCTGATGTGGACACTGCCATGGCTGCCCTTGACGACCAGCCCGCGGAGGCCCAGCCCCCGTCACCACGGTCCTCCAGCCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
CDS CCA 90 bp GCCACTCGCGGGACACGTAGAACCGCAGCAGGCTGGGCTCCCGCATaGCGGCCAGGGACACCACCTGCTGTCGCTCCCGCATGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: ATRGTRRTAAGWAPA*RPGTPPAVAPAWPP
Trigger: AGGAGGCCATGCGGGAGCGACAGCAGGTGGTGTCCCTGGCCGCCATGCGGGAGCCCAGCCTGCTGCGGTTCTACGTGTCCCGCGAGTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
CDS CCA 90 bp GGCCCGCGTCTCGGCTTCGATCTTCTGCTCCCCGTGCAGGTTCTCTaGGCCCAGCGGCTGCGCCACACTCTGGCGGATGGCAATCTCGGG +
Preference number: 5 (lower is better)
Translates to: GPRLGFDLLLPVQVL*AQRLRHTLADGNLG
Trigger: CCCGAGATTGCCATCCGCCAGAGTGTGGCGCAGCCGCTGGGCCCAGAGAACCTGCACGGGGAGCAGAAGATCGAAGCCGAGACGCGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000472108.1
ENST00000496927.5
CDS-3UTR CAA 90 bp GCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACATGTCAGCGGCGGGCAATaGGACAGGGCCTGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: AARPLFWAQTRLPRGGAHVSGGQ*DRACRA
Trigger: TGCCCTGCAGGCCCTGTCCAATTGCCCGCCGCTGAC...ATGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS GCA 90 bp GCAGATCACACGGCCCGCGTCTCGGCTTCGATCTTCTGCTCCCCGTaGAGGTTCTCTGGGCCCAGCGGCTGCGCCACACTCTGGCGGATG +
Preference number: 5 (lower is better)
Translates to: ADHTARVSASIFCSP*RFSGPSGCATLWRM
Trigger: CATCCGCCAGAGTGTGGCGCAGCCGCTGGGCCCAGAGAACCTGCACGGGGAGCAGAAGATCGAAGCCGAGACGCGGGCCGTGTGATCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000472108.1
ENST00000496927.5
CDS CCA 90 bp GTCCTTCATCCGCTCCTTCTCAGAGATGGCTCGGCCCGCCTCATCTaGGATCAGCAGCTCCGTCTCGGCCTGCGAGCTGCCCCCGCCACG +
Preference number: 5 (lower is better)
Translates to: VLHPLLLRDGSARLI*DQQLRLGLRAAPAT
Trigger: CGTGGCGGGGGCAGCTCGCAGGCCGAGACGGAGCTGCTGATCCCAGATGAGGCGGGCCGAGCCATCTCTGAGAAGGAGCGGATGAAGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CCA 90 bp GTGACGGGGGCTGGGCCTCCGCGGGCTGGTCGTCAAGGGCAGCCATaGCAGTGTCCACATCAGCGTCCTCGTCCACTTGCTCCGAGTTTG +
Preference number: 5 (lower is better)
Translates to: VTGAGPPRAGRQGQP*QCPHQRPRPLAPSL
Trigger: CAAACTCGGAGCAAGTGGACGAGGACGCTGATGTGGACACTGCCATGGCTGCCCTTGACGACCAGCCCGCGGAGGCCCAGCCCCCGTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
CDS CCA 90 bp TGCTCCCCGTGCAGGTTCTCTGGGCCCAGCGGCTGCGCCACACTCTaGCGGATGGCAATCTCGGGGCCACCTCCATACAGGCTGTTCAGG +
Preference number: 5 (lower is better)
Translates to: CSPCRFSGPSGCATL*RMAISGPPPYRLFR
Trigger: CCTGAACAGCCTGTATGGAGGTGGCCCCGAGATTGCCATCCGCCAGAGTGTGGCGCAGCCGCTGGGCCCAGAGAACCTGCACGGGGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000472108.1
ENST00000496927.5
CDS-3UTR CAA 90 bp ACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGGTCAGCGGCGGGCAATaGGACAGGGCCTGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: TDMGPDPSLHRSLSASRQVSGGQ*DRACRA
Trigger: TGCCCTGCAGGCCCTGTCCAATTGCCCGCCGCTGAC...CTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp AGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACATGGCCCCAGGAGAACTaGCGGTCCTTCATCCGCTCC +
Preference number: 5 (lower is better)
Translates to: SSPASLLGTNTPSAGWGTWPQEN*RSFIRS
Trigger: GGAGCGGATGAAGGACCGCAAGTTCTCCTGGGGCCA...TGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACATCCACTTGCTCCGAGTTaGTACGCTGCTGGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: AARPLFWAQTRLPRGGAHPLAPS*YAAGPR
Trigger: CCTGGGGCCAGCAGCGTACAAACTCGGAGCAAGTGG...ATGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTGGGCTGCTAGACAGCTaGGCATGGCCCTCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: DPSLHRSLSASRQCSVRPGLLDS*AWPSWW
Trigger: CCACCACGAGGGCCATGCCAAGCTGTCTAGCAGCCC...AGGCCGCACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp TCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCATGGGATGTGCACTCCTaGGCAAGGAAGGGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: SLRRDSAACGLWLQRRLSWDVHS*ARKGRR
Trigger: CCTGCGCCCCTTCCTTGCCAAGGAGTGCACATCCCA...TGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp AGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACATGGGATGTGCACTCCTaGGCAAGGAAGGGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: SSPASLLGTNTPSAGWGTWDVHS*ARKGRR
Trigger: CCTGCGCCCCTTCCTTGCCAAGGAGTGCACATCCCA...TGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACATAGGGGCTTTGGTGCCTaGCTGTGCTCAGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: AARPLFWAQTRLPRGGAHRGFGA*LCSVAP
Trigger: GGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCT...ATGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS TCA 90 bp AGTCCCGAGCCTCCGTCAGCGCCACCGTGGCCACCACCGGCTCCTTaGGCTCCTCGTGCAGCTGGTCCATCAGGCAGCGAAGGAACTCTT +
Preference number: 5 (lower is better)
Translates to: SPEPPSAPPWPPPAP*APRAAGPSGSEGTL
Trigger: AAGAGTTCCTTCGCTGCCTGATGGACCAGCTGCACGAGGAGCTCAAGGAGCCGGTGGTGGCCACGGTGGCGCTGACGGAGGCTCGGGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS GCA 90 bp TCCGTCAGCGCCACCGTGGCCACCACCGGCTCCTTGAGCTCCTCGTaGAGCTGGTCCATCAGGCAGCGAAGGAACTCTTGGGTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: SVSATVATTGSLSSS*SWSIRQRRNSWVSC
Trigger: GCAGGACACCCAAGAGTTCCTTCGCTGCCTGATGGACCAGCTGCACGAGGAGCTCAAGGAGCCGGTGGTGGCCACGGTGGCGCTGACGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS GCA 90 bp GCTTCGATCTTCTGCTCCCCGTGCAGGTTCTCTGGGCCCAGCGGCTaGGCCACACTCTGGCGGATGGCAATCTCGGGGCCACCTCCATAC +
Preference number: 5 (lower is better)
Translates to: ASIFCSPCRFSGPSG*ATLWRMAISGPPPY
Trigger: GTATGGAGGTGGCCCCGAGATTGCCATCCGCCAGAGTGTGGCGCAGCCGCTGGGCCCAGAGAACCTGCACGGGGAGCAGAAGATCGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000472108.1
ENST00000496927.5
CDS CCA 90 bp AGCGCCACCGTGGCCACCACCGGCTCCTTGAGCTCCTCGTGCAGCTaGTCCATCAGGCAGCGAAGGAACTCTTGGGTGTCCTGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SATVATTGSLSSSCS*SIRQRRNSWVSCWA
Trigger: TGCCCAGCAGGACACCCAAGAGTTCCTTCGCTGCCTGATGGACCAGCTGCACGAGGAGCTCAAGGAGCCGGTGGTGGCCACGGTGGCGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CCA 90 bp CGTGCAGGTTCTCTGGGCCCAGCGGCTGCGCCACACTCTGGCGGATaGCAATCTCGGGGCCACCTCCATACAGGCTGTTCAGGTAGGTCC +
Preference number: 5 (lower is better)
Translates to: RAGSLGPAAAPHSGG*QSRGHLHTGCSGRS
Trigger: GGACCTACCTGAACAGCCTGTATGGAGGTGGCCCCGAGATTGCCATCCGCCAGAGTGTGGCGCAGCCGCTGGGCCCAGAGAACCTGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000472108.1
ENST00000496927.5
CDS-3UTR CAA 90 bp CCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTGTCAGCGGCGGGCAATaGGACAGGGCCTGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: PGQSHSGDAVKQQLLPDSVSGGQ*DRACRA
Trigger: TGCCCTGCAGGCCCTGTCCAATTGCCCGCCGCTGAC...AGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp CAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGGGCTGCTAGACAGCTaGGCATGGCCCTCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: QTWGPIPACTEASLRRDSGLLDS*AWPSWW
Trigger: CCACCACGAGGGCCATGCCAAGCTGTCTAGCAGCCC...ACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp TGCAGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCGCGAAGGTGTTGAACTaGTTGAGCCACTCGCGGGAC +
Preference number: 5 (lower is better)
Translates to: CSSPASLLGTNTPSAGWGAKVLN*LSHSRD
Trigger: GTCCCGCGAGTGGCTCAACAAGTTCAACACCTTCGC...GCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp AGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTGGCCCAGGCCGCAGCTCGATCCTCCTGCGCTaGGCCAGTGCCTCGATCTCC +
Preference number: 5 (lower is better)
Translates to: SGDAVKQQLLPDSGPGRSSILLR*ASASIS
Trigger: GGAGATCGAGGCACTGGCCAAGCGCAGGAGGATCGA...GCTGCGGCCTGGGCCAGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp TCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCATCGTTGTCCTTCCCCTaGACGAACGCCTCCCACTCC +
Preference number: 5 (lower is better)
Translates to: SLRRDSAACGLWLQRRLSSLSFP*TNASHS
Trigger: GGAGTGGGAGGCGTTCGTCAAGGGGAAGGACAACGA...TGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CCA 90 bp TCGATCTCGATCCTCCTGCGCTTGGCCAGTGCCTCGATCTCCACCTaGCAGATGGAGCACACGTACAGGTGGTTCACGGCGGGGCCACCC +
Preference number: 5 (lower is better)
Translates to: SISILLRLASASIST*QMEHTYRWFTAGPP
Trigger: GGGTGGCCCCGCCGTGAACCACCTGTACGTGTGCTCCATCTGCCAGGTGGAGATCGAGGCACTGGCCAAGCGCAGGAGGATCGAGATCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
ENST00000496927.5
CDS-3UTR CAA 90 bp TCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGCAGCGAAGGAACTCTaGGGTGTCCTGCTGGGCATA +
Preference number: 5 (lower is better)
Translates to: SLRRDSAACGLWLQRRLSAAKEL*GVLLGI
Trigger: TATGCCCAGCAGGACACCCAAGAGTTCCTTCGCTGC...TGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp CCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTTGGCCCCAGGAGAACTaGCGGTCCTTCATCCGCTCC +
Preference number: 5 (lower is better)
Translates to: PRPGGFSRGFGALLCSVAWPQEN*RSFIRS
Trigger: GGAGCGGATGAAGGACCGCAAGTTCTCCTGGGGCCA...AGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCACCACTTGCTCCGAGTTaGTACGCTGCTGGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: VAPRPGGFSRGFGALLCSPLAPS*YAAGPR
Trigger: CCTGGGGCCAGCAGCGTACAAACTCGGAGCAAGTGG...TGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCACATAGCGTCCTCGTCCACTaGCTCCGAGTTTGTACGCTG +
Preference number: 5 (lower is better)
Translates to: AARPLFWAQTRLPRGGAHSVLVH*LRVCTL
Trigger: CAGCGTACAAACTCGGAGCAAGTGGACGAGGACGCT...ATGTGCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTTCGTTGTCCTTCCCCTaGACGAACGCCTCCCACTCC +
Preference number: 5 (lower is better)
Translates to: DPSLHRSLSASRQCSVRPSLSFP*TNASHS
Trigger: GGAGTGGGAGGCGTTCGTCAAGGGGAAGGACAACGA...AGGCCGCACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp TGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAGAAGGTTTCTCCAGGGGCTTaGGTGCCTTGCTGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: CVATVQRAASGCSAGFQKVSPGA*VPCCAQ
Trigger: CTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAAC...CTTCTGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CCA 90 bp GCCAGTGCCTCGATCTCCACCTGGCAGATGGAGCACACGTACAGGTaGTTCACGGCGGGGCCACCCCCGAATCTGTTGTACAGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: ASASISTWQMEHTYR*FTAGPPPNLLYRCS
Trigger: GGAGCACCTGTACAACAGATTCGGGGGTGGCCCCGCCGTGAACCACCTGTACGTGTGCTCCATCTGCCAGGTGGAGATCGAGGCACTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
ENST00000496927.5
CDS CCA 90 bp GAAAACCAGGACAGGCCCAGCCCATGTCGCCCAGTAGTGGCAAGGTaGGCGCACCGTCGGATGTACTCCACAATGAAGGCCAGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: ENQDRPSPCRPVVAR*AHRRMYSTMKASQP
Trigger: GGGCTGGCTGGCCTTCATTGTGGAGTACATCCGACGGTGCGCCCACCTTGCCACTACTGGGCGACATGGGCTGGGCCTGTCCTGGTTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491731.1
CDS-3UTR CAA 90 bp TCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCACATTCGCATCCTTTGTaGACAGCTGACAGCGACGGG +
Preference number: 5 (lower is better)
Translates to: SLRRDSAACGLWLQRRLSHSHPL*TADSDG
Trigger: CCCGTCGCTGTCAGCTGTCAACAAAGGATGCGAATG...TGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp TGCAGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCCAGCATTCGCATCCTTaGTTGACAGCTGACAGCGAC +
Preference number: 5 (lower is better)
Translates to: CSSPASLLGTNTPSAGWGQHSHP*LTADSD
Trigger: GTCGCTGTCAGCTGTCAACAAAGGATGCGAATGCTG...GCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp AGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACTCTGGCCCAGGCCGCAGCGCAGCGAAGGAACTCTaGGGTGTCCTGCTGGGCATA +
Preference number: 5 (lower is better)
Translates to: SGDAVKQQLLPDSGPGRSAAKEL*GVLLGI
Trigger: TATGCCCAGCAGGACACCCAAGAGTTCCTTCGCTGC...GCTGCGGCCTGGGCCAGAGTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GACTCTGGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGAATACCTGGGCTTTCTaGAGCACGTACGACGGTGCC +
Preference number: 5 (lower is better)
Translates to: DSGPGRSLCLTGVASGSRNTWAF*STYDGA
Trigger: GGCACCGTCGTACGTGCTCAAGAAAGCCCAGGTATT...CCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCCAGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTATGGCTGAATGGAGCTaGGCCAGGTCCTCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: GARSQPAQKPLCVATVQRMAEWS*ARSSFP
Trigger: TGGAAAGGAGGACCTGGCCAAGCTCCATTCAGCCAT...ACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTGGGATGTGCACTCCTaGGCAAGGAAGGGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: VLSGSLHSASRGCFPGSTWDVHS*ARKGRR
Trigger: CCTGCGCCCCTTCCTTGCCAAGGAGTGCACATCCCA...GGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp TCTCTGCGTCGCGACAGTGCAGCGTGCGGCCTCTGGCTGCAGCGCCGGCTTTCAAAGGTGTTGAACTTGTaGAGCCACTCGCGGGACACG +
Preference number: 5 (lower is better)
Translates to: SLRRDSAACGLWLQRRLSKVLNL*SHSRDT
Trigger: CGTGTCCCGCGAGTGGCTCAACAAGTTCAACACCTT...TGAAAGCCGGCGCTGCAGCCAGAGGCCGCACGCTGCACTGTCGCGACGCAGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCGGCTCCGCGAAGGTGTaGAACTTGTTGAGCCACTCG +
Preference number: 5 (lower is better)
Translates to: GRTSPWRFLQGLWCLAVLGSAKV*NLLSHS
Trigger: CGAGTGGCTCAACAAGTTCAACACCTTCGCGGAGCC...GAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCCAGAGGAAGGTCTGGTaGGTGATGGGGCCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: VLSGSLHSASRGCFPGSTQRKVW*VMGPGS
Trigger: GGAGCCAGGCCCCATCACCAACCAGACCTTCCTCTG...GGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp TGCAGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCTCGGCCTGGAAGGCCTaGTTCAACTTGATGAAGGTG +
Preference number: 5 (lower is better)
Translates to: CSSPASLLGTNTPSAGWGSAWKA*FNLMKV
Trigger: CACCTTCATCAAGTTGAACAAGGCCTTCCAGGCCGA...GCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS TCA 90 bp GGGTGGTGGTTCCTTCTGCGGACGCAGAAATTGAGGCTCAAGGGGTaGGGCCACCGCCCCAAGCTCGAACGGTTGAGAGAGATGCCTCCG +
Preference number: 5 (lower is better)
Translates to: GWWFLLRTQKLRLKG*GHRPKLERLREMPP
Trigger: CGGAGGCATCTCTCTCAACCGTTCGAGCTTGGGGCGGTGGCCTCACCCCTTGAGCCTCAATTTCTGCGTCCGCAGAAGGAACCACCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491053.5
CDS GCA 90 bp CGTCCACTTGCTCCGAGTTTGTACGCTGCTGGCCCCAGGAGAACTTaGGGTCCTTCATCCGCTCCTTCTCAGAGATGGCTCGGCCCGCCT +
Preference number: 5 (lower is better)
Translates to: RPLAPSLYAAGPRRT*GPSSAPSQRWLGPP
Trigger: AGGCGGGCCGAGCCATCTCTGAGAAGGAGCGGATGAAGGACCGCAAGTTCTCCTGGGGCCAGCAGCGTACAAACTCGGAGCAAGTGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS GCA 90 bp GTCCTGCTGCTGCCCTCCCTTCAACCTGCCATGTGGTCACCTCCCTaGTGTCCATCGCCCTCCAGCTCCAAGGGACTATCCAATCCTGGC +
Preference number: 5 (lower is better)
Translates to: VLLLPSLQPAMWSPP*CPSPSSSKGLSNPG
Trigger: GCCAGGATTGGATAGTCCCTTGGAGCTGGAGGGCGATGGACAGCAGGGAGGTGACCACATGGCAGGTTGAAGGGAGGGCAGCAGCAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491731.1
CDS CCA 90 bp GATGCCTCCGTGGGAGCAGAGGAAGGTCTGGTTGGTGATGGGGCCTaGCTCCGCGAAGGTGTTGAACTTGTTGAGCCACTCGCGGGACAC +
Preference number: 5 (lower is better)
Translates to: DASVGAEEGLVGDGA*LREGVELVEPLAGH
Trigger: GTGTCCCGCGAGTGGCTCAACAAGTTCAACACCTTCGCGGAGCCAGGCCCCATCACCAACCAGACCTTCCTCTGCTCCCACGGAGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
CDS-3UTR CAA 90 bp GCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTGGGGGACCGCAGCGAAGGAACTCTaGGGTGTCCTGCTGGGCATA +
Preference number: 5 (lower is better)
Translates to: ANYSQSRGQAQQDAVWGTAAKEL*GVLLGI
Trigger: TATGCCCAGCAGGACACCCAAGAGTTCCTTCGCTGC...GGTCCCCCACACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCGGCAACCGCAGGACTTaGCAGTACTTCACTCCGTTC +
Preference number: 5 (lower is better)
Translates to: GRTSPWRFLQGLWCLAVLGNRRT*QYFTPF
Trigger: GAACGGAGTGAAGTACTGCAAAGTCCTGCGGTTGCC...GAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACGCGAAGGTGTTGAACTaGTTGAGCCACTCGCGGGAC +
Preference number: 5 (lower is better)
Translates to: APGQSHSGDAVKQQLLPDAKVLN*LSHSRD
Trigger: GTCCCGCGAGTGGCTCAACAAGTTCAACACCTTCGC...GTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp CCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTGCGAAGGTGTTGAACTaGTTGAGCCACTCGCGGGAC +
Preference number: 5 (lower is better)
Translates to: PRPGGFSRGFGALLCSVAAKVLN*LSHSRD
Trigger: GTCCCGCGAGTGGCTCAACAAGTTCAACACCTTCGC...AGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp CCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGCCACCCCCGAATCTGTaGTACAGGTGCTCCCAGACG +
Preference number: 5 (lower is better)
Translates to: PGALVPCCAQWLPPLSIQPPPNL*YRCSQT
Trigger: CGTCTGGGAGCACCTGTACAACAGATTCGGGGGTGG...CTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp TGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTGAGCGCTTCGTTGTCCTTCCCCTaGACGAACGCCTCCCACTCC +
Preference number: 5 (lower is better)
Translates to: WLPPLSIQRLLPRIHLSASLSFP*TNASHS
Trigger: GGAGTGGGAGGCGTTCGTCAAGGGGAAGGACAACGA...AGCGCTCAGGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp CCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCTCGGGAAGCTGCCTTaGCCTCAAATGGCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: PRPGGFSRGFGALLCSVALGKLP*PQMAKL
Trigger: CAGCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGAG...AGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp CAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTCACGCCCCGTCTGCTTaGATCCTGATGATGGTCGCA +
Preference number: 5 (lower is better)
Translates to: QTWGPIPACTEASLRRDSHAPSA*ILMMVA
Trigger: TGCGACCATCATCAGGATCAAAGCAGACGGGGCGTG...ACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp AGTCTTCGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTCACGCCCCGTCTGCTTaGATCCTGATGATGGTCGCA +
Preference number: 5 (lower is better)
Translates to: SLRGSGPIAQWRRREAAAHAPSA*ILMMVA
Trigger: TGCGACCATCATCAGGATCAAAGCAGACGGGGCGTG...AGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCGAAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS TCA 90 bp GGTGAGACACTGCACAAGGCTGAGAATGGAGCCGTCAAAGATGTCTaGGATGACGCTGCGGTAGCGCTGCTCCTTCCGCCTCCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GETLHKAENGAVKDV*DDAAVALLLPPPAA
Trigger: GGCAGCCGGAGGCGGAAGGAGCAGCGCTACCGCAGCGTCATCTCAGACATCTTTGACGGCTCCATTCTCAGCCTTGTGCAGTGTCTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000491731.1
CDS GCA 90 bp TCAAGGGCAGCCATGGCAGTGTCCACATCAGCGTCCTCGTCCACTTaGTCCGAGTTTGTACGCTGCTGGCCCCAGGAGAACTTGCGGTCC +
Preference number: 5 (lower is better)
Translates to: SRAAMAVSTSASSST*SEFVRCWPQENLRS
Trigger: GGACCGCAAGTTCTCCTGGGGCCAGCAGCGTACAAACTCGGAGCAAGTGGACGAGGACGCTGATGTGGACACTGCCATGGCTGCCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp AGTCTTCGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTCATTCGCATCCTTTGTaGACAGCTGACAGCGACGGG +
Preference number: 5 (lower is better)
Translates to: SLRGSGPIAQWRRREAAAHSHPL*TADSDG
Trigger: CCCGTCGCTGTCAGCTGTCAACAAAGGATGCGAATG...AGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCGAAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp TGCAGCAGCCCGGCCTCTCTTCTGGGCACAAACACGCCTTCCGCGGGGTGGGGCCAGGTTCCCTTAGATTaGAGCAGCAAGTCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: CSSPASLLGTNTPSAGWGQVPLD*SSKSSL
Trigger: CAAAGAGGACTTGCTGCTCAAATCTAAGGGAACCTG...GCCCCACCCCGCGGAAGGCGTGTTTGTGCCCAGAAGAGAGGCCGGGCTGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GACAGTTGTGGGGGACACAACGATGACAGTGACTGGCAGAGGCACTGCCAGGACTGGCCCCAGGAGAACTaGCGGTCCTTCATCCGCTCC +
Preference number: 5 (lower is better)
Translates to: DSCGGHNDDSDWQRHCQDWPQEN*RSFIRS
Trigger: GGAGCGGATGAAGGACCGCAAGTTCTCCTGGGGCCA...GTCCTGGCAGTGCCTCTGCCAGTCACTGTCATCGTTGTGTCCCCCACAACTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTGACAATACCTGGGCTTTCTaGAGCACGTACGACGGTGCC +
Preference number: 5 (lower is better)
Translates to: APGQSHSGDAVKQQLLPDNTWAF*STYDGA
Trigger: GGCACCGTCGTACGTGCTCAAGAAAGCCCAGGTATT...GTCAGGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp ATGGTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCGGCAACCGCAGGACTTaGCAGTACTTCACTCCGTTC +
Preference number: 5 (lower is better)
Translates to: MVAPRPGGFSRGFGALLCGNRRT*QYFTPF
Trigger: GAACGGAGTGAAGTACTGCAAAGTCCTGCGGTTGCC...GCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp CAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTAAGGTGTTGAACTTGTaGAGCCACTCGCGGGACACG +
Preference number: 5 (lower is better)
Translates to: QTWGPIPACTEASLRRDSKVLNL*SHSRDT
Trigger: CGTGTCCCGCGAGTGGCTCAACAAGTTCAACACCTT...ACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GACAGTTGTGGGGGACACAACGATGACAGTGACTGGCAGAGGCACTGCCAGGACTCGATCCTCCTGCGCTaGGCCAGTGCCTCGATCTCC +
Preference number: 5 (lower is better)
Translates to: DSCGGHNDDSDWQRHCQDSILLR*ASASIS
Trigger: GGAGATCGAGGCACTGGCCAAGCGCAGGAGGATCGA...GTCCTGGCAGTGCCTCTGCCAGTCACTGTCATCGTTGTGTCCCCCACAACTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp TTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTTCGATCCTCCTGCGCTaGGCCAGTGCCTCGATCTCC +
Preference number: 5 (lower is better)
Translates to: LVPCCAQWLPPLSIQRLLSILLR*ASASIS
Trigger: GGAGATCGAGGCACTGGCCAAGCGCAGGAGGATCGA...AAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGACATGGCCGCTTCCTTaGACCTGTGCAATCCTGCTG +
Preference number: 5 (lower is better)
Translates to: APRPGGFSRGFGALLCSVTWPLP*TCAILL
Trigger: CAGCAGGATTGCACAGGTCAAAGGAAGCGGCCATGT...CACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp AGTCTTCGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACATGGCCGCTTCCTTaGACCTGTGCAATCCTGCTG +
Preference number: 5 (lower is better)
Translates to: SLRGSGPIAQWRRREAAATWPLP*TCAILL
Trigger: CAGCAGGATTGCACAGGTCAAAGGAAGCGGCCATGT...AGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCGAAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp TGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTGAGCGCTCACGCCCCGTCTGCTTaGATCCTGATGATGGTCGCA +
Preference number: 5 (lower is better)
Translates to: WLPPLSIQRLLPRIHLSAHAPSA*ILMMVA
Trigger: TGCGACCATCATCAGGATCAAAGCAGACGGGGCGTG...AGCGCTCAGGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS TCA 90 bp GAAGCCCACAGGAAGCGGCCAGCATTCGCATCCTTTGTTGACAGCTaGCAGCGACGGGCTATAGGGGTCTGGAGTGAGTGGAGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: EAHRKRPAFASFVDS*QRRAIGVWSEWRPL
Trigger: CAGAGGCCTCCACTCACTCCAGACCCCTATAGCCCGTCGCTGTCAGCTGTCAACAAAGGATGCGAATGCTGGCCGCTTCCTGTGGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000491053.5
ENST00000494971.2
CDS CCA 90 bp TGGTATTTGTGGGGCGGGATGCCTCCGTGGGAGCAGAGGAAGGTCTaGTTGGTGATGGGGCCTGGCTCCGCGAAGGTGTTGAACTTGTTG +
Preference number: 5 (lower is better)
Translates to: WYLWGGMPPWEQRKV*LVMGPGSAKVLNLL
Trigger: CAACAAGTTCAACACCTTCGCGGAGCCAGGCCCCATCACCAACCAGACCTTCCTCTGCTCCCACGGAGGCATCCCGCCCCACAAATACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
CDS-3UTR CAA 90 bp TGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTGAGCGCTCATTCGCATCCTTTGTaGACAGCTGACAGCGACGGG +
Preference number: 5 (lower is better)
Translates to: WLPPLSIQRLLPRIHLSAHSHPL*TADSDG
Trigger: CCCGTCGCTGTCAGCTGTCAACAAAGGATGCGAATG...AGCGCTCAGGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAAGCAGCAAGTCCTCTTaGGTCACCTCTCCTATGGAG +
Preference number: 5 (lower is better)
Translates to: VAPRPGGFSRGFGALLCSSSKSS*VTSPME
Trigger: CTCCATAGGAGAGGTGACCAAAGAGGACTTGCTGCT...TGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp ACAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGAGCAGCAAGTCCTCTTaGGTCACCTCTCCTATGGAG +
Preference number: 5 (lower is better)
Translates to: TDMGPDPSLHRSLSASRQSSKSS*VTSPME
Trigger: CTCCATAGGAGAGGTGACCAAAGAGGACTTGCTGCT...CTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTGCAGCGTCAGGTTCCCTTAGATTaGAGCAGCAAGTCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: GARSQPAQKPLCVATVQRQVPLD*SSKSSL
Trigger: CAAAGAGGACTTGCTGCTCAAATCTAAGGGAACCTG...ACGCTGCACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp CCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGATGGCTGAATGGAGCTaGGCCAGGTCCTCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: PGALVPCCAQWLPPLSIQMAEWS*ARSSFP
Trigger: TGGAAAGGAGGACCTGGCCAAGCTCCATTCAGCCAT...CTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp ATCGGGCTCCAGGGACAAAGCTGGGCCGAGCTAGCAAGAGGACAGTTGTGGGGGGGCAACCGCAGGACTTaGCAGTACTTCACTCCGTTC +
Preference number: 5 (lower is better)
Translates to: IGLQGQSWAELARGQLWGGNRRT*QYFTPF
Trigger: GAACGGAGTGAAGTACTGCAAAGTCCTGCGGTTGCC...CCCCCACAACTGTCCTCTTGCTAGCTCGGCCCAGCTTTGTCCCTGGAGCCCGAT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp CCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAAGGTGTTGAACTTGTaGAGCCACTCGCGGGACACG +
Preference number: 5 (lower is better)
Translates to: PGALVPCCAQWLPPLSIQKVLNL*SHSRDT
Trigger: CGTGTCCCGCGAGTGGCTCAACAAGTTCAACACCTT...CTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp ACTTCGAGGCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTCCACCCCCGAATCTGTaGTACAGGTGCTCCCAGACG +
Preference number: 5 (lower is better)
Translates to: TSRQITANPGGRLSRTRCPPPNL*YRCSQT
Trigger: CGTCTGGGAGCACCTGTACAACAGATTCGGGGGTGG...ACACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGCCTCGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GACTCTGGCCCAGGCCGCAGCCTCTGTCTGACAGGGGTAGCATCGGGCTCCAGGAAGGCCTTGTTCAACTaGATGAAGGTGTCGATCTCG +
Preference number: 5 (lower is better)
Translates to: DSGPGRSLCLTGVASGSRKALFN*MKVSIS
Trigger: CGAGATCGACACCTTCATCAAGTTGAACAAGGCCTT...CCTGGAGCCCGATGCTACCCCTGTCAGACAGAGGCTGCGGCCTGGGCCAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS TCA 90 bp TTGAGCAGCAAGTCCTCTTTGGTCACCTCTCCTATGGAGTCAAGGTaGGGGCAAAGGTCCCTGGAGTCCCCCATCCTGGCCTGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: LSSKSSLVTSPMESR*GQRSLESPILAWAH
Trigger: GTGAGCCCAGGCCAGGATGGGGGACTCCAGGGACCTTTGCCCTCACCTTGACTCCATAGGAGAGGTGACCAAAGAGGACTTGCTGCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000491053.5
ENST00000494971.2
CDS GCA 90 bp GGAGTCCTGTTCAGAGAACTTGGAAGAGGAGCCCAGCAGAGGGGCTaGCAGCCGCTGCTCCAGGAATACCTCCTTCTCACAGGCGTAACA +
Preference number: 5 (lower is better)
Translates to: GVLFRELGRGAQQRG*QPLLQEYLLLTGVT
Trigger: TGTTACGCCTGTGAGAAGGAGGTATTCCTGGAGCAGCGGCTGGCAGCCCCTCTGCTGGGCTCCTCTTCCAAGTTCTCTGAACAGGACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS GCA 90 bp AGACCAGCTTCTGGTAGCTCTTGCACAGGGCTGGCTTCTTATCTGTaGGCACCAGGCCGCCACACTCCAAGAAGAACTGAGTCAGCGGCG +
Preference number: 5 (lower is better)
Translates to: RPASGSSCTGLASYL*APGRHTPRRTESAA
Trigger: CGCCGCTGACTCAGTTCTTCTTGGAGTGTGGCGGCCTGGTGCGCACAGATAAGAAGCCAGCCCTGTGCAAGAGCTACCAGAAGCTGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS GCA 90 bp GTGTCCACATCAGCGTCCTCGTCCACTTGCTCCGAGTTTGTACGCTaGTGGCCCCAGGAGAACTTGCGGTCCTTCATCCGCTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: VSTSASSSTCSEFVR*WPQENLRSFIRSFS
Trigger: TGAGAAGGAGCGGATGAAGGACCGCAAGTTCTCCTGGGGCCAGCAGCGTACAAACTCGGAGCAAGTGGACGAGGACGCTGATGTGGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CCA 90 bp TCCACATCAGCGTCCTCGTCCACTTGCTCCGAGTTTGTACGCTGCTaGCCCCAGGAGAACTTGCGGTCCTTCATCCGCTCCTTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: STSASSSTCSEFVRC*PQENLRSFIRSFSE
Trigger: CTCTGAGAAGGAGCGGATGAAGGACCGCAAGTTCTCCTGGGGCCAGCAGCGTACAAACTCGGAGCAAGTGGACGAGGACGCTGATGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCCAGCATTCGCATCCTTaGTTGACAGCTGACAGCGAC +
Preference number: 5 (lower is better)
Translates to: VLSGSLHSASRGCFPGSTQHSHP*LTADSD
Trigger: GTCGCTGTCAGCTGTCAACAAAGGATGCGAATGCTG...GGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GACAGTTGTGGGGGACACAACGATGACAGTGACTGGCAGAGGCACTGCCAGGACAGCGTCCTCGTCCACTaGCTCCGAGTTTGTACGCTG +
Preference number: 5 (lower is better)
Translates to: DSCGGHNDDSDWQRHCQDSVLVH*LRVCTL
Trigger: CAGCGTACAAACTCGGAGCAAGTGGACGAGGACGCT...GTCCTGGCAGTGCCTCTGCCAGTCACTGTCATCGTTGTGTCCCCCACAACTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp CGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCAAGGAGACGTGGCTGTaGATCTTGAATGAGTACATC +
Preference number: 5 (lower is better)
Translates to: RGSGPIAQWRRREAAATPKETWL*ILNEYI
Trigger: GATGTACTCATTCAAGATCAACAGCCACGTCTCCTT...GGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCCCAGGATCCACCTCGGCCTGGAAGGCCTaGTTCAACTTGATGAAGGTG +
Preference number: 5 (lower is better)
Translates to: VLSGSLHSASRGCFPGSTSAWKA*FNLMKV
Trigger: CACCTTCATCAAGTTGAACAAGGCCTTCCAGGCCGA...GGTGGATCCTGGGAAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp TTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGAGGCTGCTTCTCGGGAAGCTGCCTTaGCCTCAAATGGCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: LVPCCAQWLPPLSIQRLLLGKLP*PQMAKL
Trigger: CAGCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGAG...AAGCAGCCTCTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS GCA 90 bp GCCGTTTCTTATGCCAGACCTCAGAGACCAGCTTCTGGTAGCTCTTaGACAGGGCTGGCTTCTTATCTGTGCGCACCAGGCCGCCACACT +
Preference number: 5 (lower is better)
Translates to: AVSYARPQRPASGSS*TGLASYLCAPGRHT
Trigger: AGTGTGGCGGCCTGGTGCGCACAGATAAGAAGCCAGCCCTGTGCAAGAGCTACCAGAAGCTGGTCTCTGAGGTCTGGCATAAGAAACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS GCA 90 bp CTTCAAAGTAGCCAAGAAATCCCCTGCATATTAAGCCAACTCCTCTaGAGGCTTCGGCCCCCAGCTCCTCCCAGGACCTCCCTGGTTCCC +
Preference number: 5 (lower is better)
Translates to: LQSSQEIPCILSQLL*RLRPPAPPRTSLVP
Trigger: GGGAACCAGGGAGGTCCTGGGAGGAGCTGGGGGCCGAAGCCTGCAGAGGAGTTGGCTTAATATGCAGGGGATTTCTTGGCTACTTTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491731.1
CDS GCA 90 bp CACTGTGCTGGTGGCTCAGTAGCTGGGCTGGGATGCCCTCGAAGGTaGCTTATTGGCTCTGTTAGCTTTGGATTCCGCGGGGAATCACTC +
Preference number: 5 (lower is better)
Translates to: HCAGGSVAGLGCPRR*LIGSVSFGFRGESL
Trigger: GAGTGATTCCCCGCGGAATCCAAAGCTAACAGAGCCAATAAGGCACCTTCGAGGGCATCCCAGCCCAGCTACTGAGCCACCAGCACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491053.5
CDS-3UTR CAA 90 bp CGGGGCTCCGGGCCAATCGCACAGTGGAGACGCCGTGAAGCAGCAGCTACTCCCTCACAGCTGTACATGTaGTCACCCTTTAACTCATCA +
Preference number: 5 (lower is better)
Translates to: RGSGPIAQWRRREAAATPSQLYM*SPFNSS
Trigger: TGATGAGTTAAAGGGTGACAACATGTACAGCTGTGA...GGGAGTAGCTGCTGCTTCACGGCGTCTCCACTGTGCGATTGGCCCGGAGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp CCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTACGTGGCTGTTGATCTaGAATGAGTACATCACCTCG +
Preference number: 5 (lower is better)
Translates to: PRPGGFSRGFGALLCSVATWLLI*NEYITS
Trigger: CGAGGTGATGTACTCATTCAAGATCAACAGCCACGT...AGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAACATGGCCGCTTCCTTaGACCTGTGCAATCCTGCTG +
Preference number: 5 (lower is better)
Translates to: GQAVRYPCFIIRFPGGGSTWPLP*TCAILL
Trigger: CAGCAGGATTGCACAGGTCAAAGGAAGCGGCCATGT...TGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCACAGCTTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS GCA 90 bp CAACTTGATGAAGGTGTCGATCTCGATCCTCCTGCGCTTGGCCAGTaGCTCGATCTCCACCTGGCAGATGGAGCACACGTACAGGTGGTT +
Preference number: 5 (lower is better)
Translates to: QLDEGVDLDPPALGQ*LDLHLADGAHVQVV
Trigger: AACCACCTGTACGTGTGCTCCATCTGCCAGGTGGAGATCGAGGCACTGGCCAAGCGCAGGAGGATCGAGATCGACACCTTCATCAAGTTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
ENST00000496927.5
CDS CCA 90 bp GCGAAGGAACTCTTGGGTGTCCTGCTGGGCATAGCCTCGGAACATTaGGTTGACCAACTTGATCCCATGAGACAGACTGGTGGGGACCAC +
Preference number: 5 (lower is better)
Translates to: AKELLGVLLGIASEH*VDQLDPMRQTGGDH
Trigger: GTGGTCCCCACCAGTCTGTCTCATGGGATCAAGTTGGTCAACCCAATGTTCCGAGGCTATGCCCAGCAGGACACCCAAGAGTTCCTTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CCA 90 bp CCCTCGGCGTTCTGCACCACCGTCTCGTGGACTTCTGTGACGTACTaGTCATCAAACTCGTACCACTGCCCATTGATCACGTTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: PSAFCTTVSWTSVTY*SSNSYHCPLITFWQ
Trigger: CTGCCAGAACGTGATCAATGGGCAGTGGTACGAGTTTGATGACCAGTACGTCACAGAAGTCCACGAGACGGTGGTGCAGAACGCCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
CDS CCA 90 bp AAGTCTCTAATGGATGAGGCGCCTGAGCCACCCAATGCTCCTCTGTaGCAGTCTGAGGACCCAGCAGAGGGAATTTCCAGGACACACGAG +
Preference number: 5 (lower is better)
Translates to: KSLMDEAPEPPNAPL*QSEDPAEGISRTHE
Trigger: CTCGTGTGTCCTGGAAATTCCCTCTGCTGGGTCCTCAGACTGCCACAGAGGAGCATTGGGTGGCTCAGGCGCCTCATCCATTAGAGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472108.1
CDS-3UTR CAA 90 bp CCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGCAGGTTCCCTTAGATTaGAGCAGCAAGTCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: PGALVPCCAQWLPPLSIQQVPLD*SSKSSL
Trigger: CAAAGAGGACTTGCTGCTCAAATCTAAGGGAACCTG...CTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp TCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCAAGCCCACTTGCTCCGAGTTaGTACGCTGCTGGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: SVFFSISSGSCLCLKWPSPLAPS*YAAGPR
Trigger: CCTGGGGCCAGCAGCGTACAAACTCGGAGCAAGTGG...GCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp CCAGGGGCTTTGGTGCCTTGCTGTGCTCAGTGGCTCCCTCCACTCAGCATCCAGACGTGGCTGTTGATCTaGAATGAGTACATCACCTCG +
Preference number: 5 (lower is better)
Translates to: PGALVPCCAQWLPPLSIQTWLLI*NEYITS
Trigger: CGAGGTGATGTACTCATTCAAGATCAACAGCCACGT...CTGGATGCTGAGTGGAGGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp ATCGGGCTCCAGGGACAAAGCTGGGCCGAGCTAGCAAGAGGACAGTTGTGGGGGACGTGGCTGTTGATCTaGAATGAGTACATCACCTCG +
Preference number: 5 (lower is better)
Translates to: IGLQGQSWAELARGQLWGTWLLI*NEYITS
Trigger: CGAGGTGATGTACTCATTCAAGATCAACAGCCACGT...CCCCCACAACTGTCCTCTTGCTAGCTCGGCCCAGCTTTGTCCCTGGAGCCCGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GCAAATTACAGCCAATCCAGGGGGCAGGCTCAGCAGGACGCGGTGTGGGGGACCAAGGAGACGTGGCTGTaGATCTTGAATGAGTACATC +
Preference number: 5 (lower is better)
Translates to: ANYSQSRGQAQQDAVWGTKETWL*ILNEYI
Trigger: GATGTACTCATTCAAGATCAACAGCCACGTCTCCTT...GGTCCCCCACACCGCGTCCTGCTGAGCCTGCCCCCTGGATTGGCTGTAATTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp CAGACATGGGGCCCGATCCCAGCCTGCACAGAAGCCTCTCTGCGTCGCGACAGTAAGGAGACGTGGCTGTaGATCTTGAATGAGTACATC +
Preference number: 5 (lower is better)
Translates to: QTWGPIPACTEASLRRDSKETWL*ILNEYI
Trigger: GATGTACTCATTCAAGATCAACAGCCACGTCTCCTT...ACTGTCGCGACGCAGAGAGGCTTCTGTGCAGGCTGGGATCGGGCCCCATGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GCAGAGGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTCAGAGGAAGGTCTGGTaGGTGATGGGGCCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: AEALPGQRPKLTSQSLGRQRKVW*VMGPGS
Trigger: GGAGCCAGGCCCCATCACCAACCAGACCTTCCTCTG...ACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GTCGCACCTCGCCCTGGCGGTTTCTCCAGGGGCTTTGGTGCCTTGCTGTGCTCATCACAGCTGTACATGTaGTCACCCTTTAACTCATCA +
Preference number: 5 (lower is better)
Translates to: VAPRPGGFSRGFGALLCSSQLYM*SPFNSS
Trigger: TGATGAGTTAAAGGGTGACAACATGTACAGCTGTGA...TGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAACCGCCAGGGCGAGGTGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp AAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCACAGAGGAAGGTCTGGTaGGTGATGGGGCCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: KSVFFSISSGSCLCLKWPQRKVW*VMGPGS
Trigger: GGAGCCAGGCCCCATCACCAACCAGACCTTCCTCTG...TGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp AACCAAACCAACTTTTCTGCCTCTTTACACGGCGGGGTTCTGCAGCAGCCCGGCTCGGCCTGGAAGGCCTaGTTCAACTTGATGAAGGTG +
Preference number: 5 (lower is better)
Translates to: NQTNFSASLHGGVLQQPGSAWKA*FNLMKV
Trigger: CACCTTCATCAAGTTGAACAAGGCCTTCCAGGCCGA...GCCGGGCTGCTGCAGAACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GCTGCCTTTGCCTCAAATGGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGCTCGGGAAGCTGCCTTaGCCTCAAATGGCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: AAFASNGQAVRYPCFIIRLGKLP*PQMAKL
Trigger: CAGCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGAG...CCGGATGATGAAACAGGGATACCTCACAGCTTGGCCATTTGAGGCAAAGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp AAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCAAGGGGCTTTGGTGCCTaGCTGTGCTCAGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: KSVFFSISSGSCLCLKWPRGFGA*LCSVAP
Trigger: GGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCT...TGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAGCAAATTTCGTTTCTCCAGGGGCTTaGGTGCCTTGCTGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: VRYPCFIIRFPGGGSANFVSPGA*VPCCAQ
Trigger: CTGAGCACAGCAAGGCACCAAAGCCCCTGGAGAAAC...GAAATTTGCTGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CCA 90 bp GGTAGATGGCTGAATGGAGCTTGGCCAGGTCCTCCTTTCCAGGAATaGGCAGTGATAAGTCCTGGAACGTTTCCACTGTGGTGGATACCC +
Preference number: 5 (lower is better)
Translates to: GRWLNGAWPGPPFQE*AVISPGTFPLWWIP
Trigger: GGGTATCCACCACAGTGGAAACGTTCCAGGACTTATCACTGCCCATTCCTGGAAAGGAGGACCTGGCCAAGCTCCATTCAGCCATCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000491731.1
CDS-3UTR CAA 90 bp TCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCAAGCAGCGTCCTCGTCCACTaGCTCCGAGTTTGTACGCTG +
Preference number: 5 (lower is better)
Translates to: SVFFSISSGSCLCLKWPSSVLVH*LRVCTL
Trigger: CAGCGTACAAACTCGGAGCAAGTGGACGAGGACGCT...GCTTGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GGCCAAGCTGTGAGGTATCCCTGTTTCATCATCCGGTTCCCTGGTGGGGGCTCAAAGGCCTTGTTCAACTaGATGAAGGTGTCGATCTCG +
Preference number: 5 (lower is better)
Translates to: GQAVRYPCFIIRFPGGGSKALFN*MKVSIS
Trigger: CGAGATCGACACCTTCATCAAGTTGAACAAGGCCTT...TGAGCCCCCACCAGGGAACCGGATGATGAAACAGGGATACCTCACAGCTTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GACAGTTGTGGGGGACACAACGATGACAGTGACTGGCAGAGGCACTGCCAGGACTCAGGGACCTGCTCTTaGGATGTTCAAAAGGACATG +
Preference number: 5 (lower is better)
Translates to: DSCGGHNDDSDWQRHCQDSGTCS*DVQKDM
Trigger: CATGTCCTTTTGAACATCCAAAGAGCAGGTCCCTGA...GTCCTGGCAGTGCCTCTGCCAGTCACTGTCATCGTTGTGTCCCCCACAACTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315480.9
CDS-3UTR CAA 90 bp GCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAACAGGGGCTTTGGTGCCTaGCTGTGCTCAGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: ALPGQRPKLTSQSLGRFNRGFGA*LCSVAP
Trigger: GGGAGCCACTGAGCACAGCAAGGCACCAAAGCCCCT...GTTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp AAGTCTGTCTTCTTTAGCATCAGCTCGGGAAGCTGCCTTTGCCTCAAATGGCCAGGCTCCGCGAAGGTGTaGAACTTGTTGAGCCACTCG +
Preference number: 5 (lower is better)
Translates to: KSVFFSISSGSCLCLKWPGSAKV*NLLSHS
Trigger: CGAGTGGCTCAACAAGTTCAACACCTTCGCGGAGCC...TGGCCATTTGAGGCAAAGGCAGCTTCCCGAGCTGATGCTAAAGAAGACAGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAACCCACCCCCGAATCTGTaGTACAGGTGCTCCCAGACG +
Preference number: 5 (lower is better)
Translates to: ALPGQRPKLTSQSLGRFNPPPNL*YRCSQT
Trigger: CGTCTGGGAGCACCTGTACAACAGATTCGGGGGTGG...GTTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS TCA 90 bp GTTCTTCATGCCCGTGAGGCCTCGAGGTTTCAGGTCATCGTCCTCTaGCTCAGACTCTCCTTCATCAGCCACAGCAATAGGAACAGCTTT +
Preference number: 5 (lower is better)
Translates to: VLHAREASRFQVIVL*LRLSFISHSNRNSF
Trigger: AAAGCTGTTCCTATTGCTGTGGCTGATGAAGGAGAGTCTGAGTCAGAGGACGATGACCTGAAACCTCGAGGCCTCACGGGCATGAAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CCA 90 bp TCCCTGCTGTCCATCGCCCTCCAGCTCCAAGGGACTATCCAATCCTaGCCACTTCAAAGTAGCCAAGAAATCCCCTGCATATTAAGCCAA +
Preference number: 5 (lower is better)
Translates to: SLLSIALQLQGTIQS*PLQSSQEIPCILSQ
Trigger: TTGGCTTAATATGCAGGGGATTTCTTGGCTACTTTGAAGTGGCCAGGATTGGATAGTCCCTTGGAGCTGGAGGGCGATGGACAGCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491731.1
CDS-3UTR CAA 90 bp CTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTGGGCTGCTAGACAGCTaGGCATGGCCCTCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LGRFNKPEVHIFSSCSVTGLLDS*AWPSWW
Trigger: CCACCACGAGGGCCATGCCAAGCTGTCTAGCAGCCC...AGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGGCGGGGTTCTGCTCAAGTTGTGCTTTTTaGCCTGTGCATGAATGGTGC +
Preference number: 5 (lower is better)
Translates to: ALLQTKPTFLPLYTAGFCSSCAF*PVHEWC
Trigger: GCACCATTCATGCACAGGCAAAAAAGCACAACTTGA...GCAGAACCCCGCCGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp TTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGGGCTCCGCGAAGGTGTaGAACTTGTTGAGCCACTCG +
Preference number: 5 (lower is better)
Translates to: FLVAALLQTKPTFLPLYTGSAKV*NLLSHS
Trigger: CGAGTGGCTCAACAAGTTCAACACCTTCGCGGAGCC...CGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp TTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGATGGCTGAATGGAGCTaGGCCAGGTCCTCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: FLVAALLQTKPTFLPLYTMAEWS*ARSSFP
Trigger: TGGAAAGGAGGACCTGGCCAAGCTCCATTCAGCCAT...CGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp GGCACTGCCAGGACAAAGACCCAAATTAACGTCACAGAGTCTTGGTCGTTTCAAAAGGCCTTGTTCAACTaGATGAAGGTGTCGATCTCG +
Preference number: 5 (lower is better)
Translates to: GTARTKTQINVTESWSFQKALFN*MKVSIS
Trigger: CGAGATCGACACCTTCATCAAGTTGAACAAGGCCTT...TTGAAACGACCAAGACTCTGTGACGTTAATTTGGGTCTTTGTCCTGGCAGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp ATATTTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTAAATACCTGGGCTTTCTaGAGCACGTACGACGGTGCC +
Preference number: 5 (lower is better)
Translates to: IFSSCSVTANQTNFSASLNTWAF*STYDGA
Trigger: GGCACCGTCGTACGTGCTCAAGAAAGCCCAGGTATT...TAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp AAGTGCATATATTTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGAGCAGCAAGTCCTCTTaGGTCACCTCTCCTATGGAG +
Preference number: 5 (lower is better)
Translates to: KCIYFLVAALLQTKPTFLSSKSS*VTSPME
Trigger: CTCCATAGGAGAGGTGACCAAAGAGGACTTGCTGCT...CAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAAATATATGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp TTTCTAGTTGCAGCGTTACTGCAAACCAAACCAACTTTTCTGCCTCTTTACACGTCAAGTTGTGCTTTTTaGCCTGTGCATGAATGGTGC +
Preference number: 5 (lower is better)
Translates to: FLVAALLQTKPTFLPLYTSSCAF*PVHEWC
Trigger: GCACCATTCATGCACAGGCAAAAAAGCACAACTTGA...CGTGTAAAGAGGCAGAAAAGTTGGTTTGGTTTGCAGTAACGCTGCAACTAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS-3UTR CAA 90 bp CTTGGTCGTTTCAACAAGCCTGAAGTGCATATATTTTCTAGTTGCAGCGTTACTTCAAGTTGTGCTTTTTaGCCTGTGCATGAATGGTGC +
Preference number: 5 (lower is better)
Translates to: LGRFNKPEVHIFSSCSVTSSCAF*PVHEWC
Trigger: GCACCATTCATGCACAGGCAAAAAAGCACAACTTGA...AGTAACGCTGCAACTAGAAAATATATGCACTTCAGGCTTGTTGAAACGACCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS GCA 72 bp GGCCCTGTCAGCCCGGAGCCGGGCTGGGGTCGCCAATaGTCAGAGGCCCGGCCCACAGAAGCAGCCGGTGGC +
Preference number: 6 (lower is better)
Translates to: GPVSPEPGWGRQ*SEARPTEAAGG
Trigger: GCCACCGGCTGCTTCTGTGGGCCGGGCCTCTGAGCATTGGCGACCCCAGCCCGGCTCCGGGCTGACAGGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358355.5
CDS CCA 72 bp CTGGCGAAGCCAGGCCCTGTCAGCCCGGAGCCGGGCTaGGGTCGCCAATGCTCAGAGGCCCGGCCCACAGAA +
Preference number: 6 (lower is better)
Translates to: LAKPGPVSPEPG*GRQCSEARPTE
Trigger: TTCTGTGGGCCGGGCCTCTGAGCATTGGCGACCCCAGCCCGGCTCCGGGCTGACAGGGCCTGGCTTCGCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358355.5
CDS GCA 72 bp AGGCTGGGCTCCCGCATGGCGGCCAGGGACACCACCTaGTGTCGCTCCCGCATGGCCTCCTCGCTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: RLGSRMAARDTT*CRSRMASSLLF
Trigger: GAAGAGCAGCGAGGAGGCCATGCGGGAGCGACAGCAGGTGGTGTCCCTGGCCGCCATGCGGGAGCCCAGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
CDS CCA 72 bp GGGACACGTAGAACCGCAGCAGGCTGGGCTCCCGCATaGCGGCCAGGGACACCACCTGCTGTCGCTCCCGCA +
Preference number: 6 (lower is better)
Translates to: GTRRTAAGWAPA*RPGTPPAVAPA
Trigger: TGCGGGAGCGACAGCAGGTGGTGTCCCTGGCCGCCATGCGGGAGCCCAGCCTGCTGCGGTTCTACGTGTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
CDS GCA 72 bp ACGGCCCGCGTCTCGGCTTCGATCTTCTGCTCCCCGTaGAGGTTCTCTGGGCCCAGCGGCTGCGCCACACTC +
Preference number: 6 (lower is better)
Translates to: TARVSASIFCSP*RFSGPSGCATL
Trigger: GAGTGTGGCGCAGCCGCTGGGCCCAGAGAACCTGCACGGGGAGCAGAAGATCGAAGCCGAGACGCGGGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000472108.1
ENST00000496927.5
CDS CCA 72 bp GAGGACCGTGGTGACGGGGGCTGGGCCTCCGCGGGCTaGTCGTCAAGGGCAGCCATGGCAGTGTCCACATCA +
Preference number: 6 (lower is better)
Translates to: EDRGDGGWASAG*SSRAAMAVSTS
Trigger: TGATGTGGACACTGCCATGGCTGCCCTTGACGACCAGCCCGCGGAGGCCCAGCCCCCGTCACCACGGTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
CDS CCA 72 bp CCAATGCTCAGAGGCCCGGCCCACAGAAGCAGCCGGTaGCGGCCCGGAACTCACCTGCACTCGCAACTGCGC +
Preference number: 6 (lower is better)
Translates to: PMLRGPAHRSSR*RPGTHLHSQLR
Trigger: GCGCAGTTGCGAGTGCAGGTGAGTTCCGGGCCGCCACCGGCTGCTTCTGTGGGCCGGGCCTCTGAGCATTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358355.5
CDS CCA 72 bp CCGCTCCTTCTCAGAGATGGCTCGGCCCGCCTCATCTaGGATCAGCAGCTCCGTCTCGGCCTGCGAGCTGCC +
Preference number: 6 (lower is better)
Translates to: PLLLRDGSARLI*DQQLRLGLRAA
Trigger: GGCAGCTCGCAGGCCGAGACGGAGCTGCTGATCCCAGATGAGGCGGGCCGAGCCATCTCTGAGAAGGAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CCA 72 bp GCTGGGCCTCCGCGGGCTGGTCGTCAAGGGCAGCCATaGCAGTGTCCACATCAGCGTCCTCGTCCACTTGCT +
Preference number: 6 (lower is better)
Translates to: AGPPRAGRQGQP*QCPHQRPRPLA
Trigger: AGCAAGTGGACGAGGACGCTGATGTGGACACTGCCATGGCTGCCCTTGACGACCAGCCCGCGGAGGCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
CDS CCA 72 bp TGCAGGTTCTCTGGGCCCAGCGGCTGCGCCACACTCTaGCGGATGGCAATCTCGGGGCCACCTCCATACAGG +
Preference number: 6 (lower is better)
Translates to: CRFSGPSGCATL*RMAISGPPPYR
Trigger: CCTGTATGGAGGTGGCCCCGAGATTGCCATCCGCCAGAGTGTGGCGCAGCCGCTGGGCCCAGAGAACCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000472108.1
ENST00000496927.5
CDS TCA 72 bp TGGCAAGGTGGGCGCACCGTCGGATGTACTCCACAATaGAGGCCAGCCAGCCCTGGGCGGCATAGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: WQGGRTVGCTPQ*RPASPGRHSCP
Trigger: GGGACAGCTATGCCGCCCAGGGCTGGCTGGCCTTCATTGTGGAGTACATCCGACGGTGCGCCCACCTTGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491731.1
CDS GCA 72 bp GCCACCGTGGCCACCACCGGCTCCTTGAGCTCCTCGTaGAGCTGGTCCATCAGGCAGCGAAGGAACTCTTGG +
Preference number: 6 (lower is better)
Translates to: ATVATTGSLSSS*SWSIRQRRNSW
Trigger: CCAAGAGTTCCTTCGCTGCCTGATGGACCAGCTGCACGAGGAGCTCAAGGAGCCGGTGGTGGCCACGGTGGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS GCA 72 bp CCAGGCCTGTGTCCTGCTGCTGCCCTCCCTTCAACCTaGCATGTGGTCACCTCCCTGCTGTCCATCGCCCTC +
Preference number: 6 (lower is better)
Translates to: PGLCPAAALPST*HVVTSLLSIAL
Trigger: GAGGGCGATGGACAGCAGGGAGGTGACCACATGGCAGGTTGAAGGGAGGGCAGCAGCAGGACACAGGCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491731.1
CDS CCA 72 bp TCTCTGGGCCCAGCGGCTGCGCCACACTCTGGCGGATaGCAATCTCGGGGCCACCTCCATACAGGCTGTTCA +
Preference number: 6 (lower is better)
Translates to: SLGPAAAPHSGG*QSRGHLHTGCS
Trigger: TGAACAGCCTGTATGGAGGTGGCCCCGAGATTGCCATCCGCCAGAGTGTGGCGCAGCCGCTGGGCCCAGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000472108.1
ENST00000496927.5
CDS TCA 72 bp AGCTCGGGTGGTGGTTCCTTCTGCGGACGCAGAAATTaGGGCTCAAGGGGTGAGGCCACCGCCCCAAGCTCG +
Preference number: 6 (lower is better)
Translates to: SSGGGSFCGRRN*GSRGEATAPSS
Trigger: CGAGCTTGGGGCGGTGGCCTCACCCCTTGAGCCTCAATTTCTGCGTCCGCAGAAGGAACCACCACCCGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491053.5
CDS CCA 72 bp GACAGGCCCAGCCCATGTCGCCCAGTAGTGGCAAGGTaGGCGCACCGTCGGATGTACTCCACAATGAAGGCC +
Preference number: 6 (lower is better)
Translates to: DRPSPCRPVVAR*AHRRMYSTMKA
Trigger: GGCCTTCATTGTGGAGTACATCCGACGGTGCGCCCACCTTGCCACTACTGGGCGACATGGGCTGGGCCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491731.1
CDS CCA 72 bp TGTGTCCTGCTGCTGCCCTCCCTTCAACCTGCCATGTaGTCACCTCCCTGCTGTCCATCGCCCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: CVLLLPSLQPAM*SPPCCPSPSSS
Trigger: GGAGCTGGAGGGCGATGGACAGCAGGGAGGTGACCACATGGCAGGTTGAAGGGAGGGCAGCAGCAGGACACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491731.1
CDS CAA 90 bp TGGAGGCCTCTGGCAAGGAGCCACCGGCTCGGCGCTTCGCTGACATaGTTAACTGTGAGCTCGGGTGGTGGTTCCTTCTGCGGACGCAGA +
Preference number: 6 (lower is better)
Translates to: WRPLARSHRLGASLT*LTVSSGGGSFCGRR
Trigger: TCTGCGTCCGCAGAAGGAACCACCACCCGAGCTCACAGTTAACAATGTCAGCGAAGCGCCGAGCCGGTGGCTCCTTGCCAGAGGCCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491053.5
CDS GCA 72 bp CTGCCCTCCCTTCAACCTGCCATGTGGTCACCTCCCTaGTGTCCATCGCCCTCCAGCTCCAAGGGACTATCC +
Preference number: 6 (lower is better)
Translates to: LPSLQPAMWSPP*CPSPSSSKGLS
Trigger: GGATAGTCCCTTGGAGCTGGAGGGCGATGGACAGCAGGGAGGTGACCACATGGCAGGTTGAAGGGAGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491731.1
CDS CCA 72 bp GCGTCCTCGTCCACTTGCTCCGAGTTTGTACGCTGCTaGCCCCAGGAGAACTTGCGGTCCTTCATCCGCTCC +
Preference number: 6 (lower is better)
Translates to: ASSSTCSEFVRC*PQENLRSFIRS
Trigger: GGAGCGGATGAAGGACCGCAAGTTCTCCTGGGGCCAGCAGCGTACAAACTCGGAGCAAGTGGACGAGGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CCA 72 bp ATCCTCCTGCGCTTGGCCAGTGCCTCGATCTCCACCTaGCAGATGGAGCACACGTACAGGTGGTTCACGGCG +
Preference number: 6 (lower is better)
Translates to: ILLRLASASIST*QMEHTYRWFTA
Trigger: CGCCGTGAACCACCTGTACGTGTGCTCCATCTGCCAGGTGGAGATCGAGGCACTGGCCAAGCGCAGGAGGAT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
ENST00000496927.5
CDS CAA 90 bp GTCAAGGGCAGCCATGGCAGTGTCCACATCAGCGTCCTCGTCCACTaGCTCCGAGTTTGTACGCTGCTGGCCCCAGGAGAACTTGCGGTC +
Preference number: 6 (lower is better)
Translates to: VKGSHGSVHISVLVH*LRVCTLLAPGELAV
Trigger: GACCGCAAGTTCTCCTGGGGCCAGCAGCGTACAAACTCGGAGCAAGTGGACGAGGACGCTGATGTGGACACTGCCATGGCTGCCCTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS GCA 72 bp TCAGCGTCCTCGTCCACTTGCTCCGAGTTTGTACGCTaGTGGCCCCAGGAGAACTTGCGGTCCTTCATCCGC +
Preference number: 6 (lower is better)
Translates to: SASSSTCSEFVR*WPQENLRSFIR
Trigger: GCGGATGAAGGACCGCAAGTTCTCCTGGGGCCAGCAGCGTACAAACTCGGAGCAAGTGGACGAGGACGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS GCA 72 bp GCCATGGCAGTGTCCACATCAGCGTCCTCGTCCACTTaGTCCGAGTTTGTACGCTGCTGGCCCCAGGAGAAC +
Preference number: 6 (lower is better)
Translates to: AMAVSTSASSST*SEFVRCWPQEN
Trigger: GTTCTCCTGGGGCCAGCAGCGTACAAACTCGGAGCAAGTGGACGAGGACGCTGATGTGGACACTGCCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CCA 72 bp GGGCGCAGGTCGAGCCCCTCGAGGGGGAAGGAGACGTaGCTGTTGATCTTGAATGAGTACATCACCTCGTGC +
Preference number: 6 (lower is better)
Translates to: GRRSSPSRGKET*LLILNEYITSC
Trigger: GCACGAGGTGATGTACTCATTCAAGATCAACAGCCACGTCTCCTTCCCCCTCGAGGGGCTCGACCTGCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CAA 90 bp CCATGGCAGTGTCCACATCAGCGTCCTCGTCCACTTGCTCCGAGTTaGTACGCTGCTGGCCCCAGGAGAACTTGCGGTCCTTCATCCGCT +
Preference number: 6 (lower is better)
Translates to: PWQCPHQRPRPLAPS*YAAGPRRTCGPSSA
Trigger: AGCGGATGAAGGACCGCAAGTTCTCCTGGGGCCAGCAGCGTACAAACTCGGAGCAAGTGGACGAGGACGCTGATGTGGACACTGCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CAA 90 bp TATTTGTGGGGCGGGATGCCTCCGTGGGAGCAGAGGAAGGTCTGGTaGGTGATGGGGCCTGGCTCCGCGAAGGTGTTGAACTTGTTGAGC +
Preference number: 6 (lower is better)
Translates to: YLWGGMPPWEQRKVW*VMGPGSAKVLNLLS
Trigger: GCTCAACAAGTTCAACACCTTCGCGGAGCCAGGCCCCATCACCAACCAGACCTTCCTCTGCTCCCACGGAGGCATCCCGCCCCACAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
CDS TCA 72 bp AGCCCACAGGAAGCGGCCAGCATTCGCATCCTTTGTTaGCAGCTGACAGCGACGGGCTATAGGGGTCTGGAG +
Preference number: 6 (lower is better)
Translates to: SPQEAASIRILC*QLTATGYRGLE
Trigger: CTCCAGACCCCTATAGCCCGTCGCTGTCAGCTGTCAACAAAGGATGCGAATGCTGGCCGCTTCCTGTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000491053.5
ENST00000494971.2
CDS TCA 72 bp GGCGCCTGGCTTGGCCGGCACATTCTGGTAGATGGCTaGATGGAGCTTGGCCAGGTCCTCCTTTCCAGGAAT +
Preference number: 6 (lower is better)
Translates to: GAWLGRHILVDG*MELGQVLLSRN
Trigger: ATTCCTGGAAAGGAGGACCTGGCCAAGCTCCATTCAGCCATCTACCAGAATGTGCCGGCCAAGCCAGGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000491731.1
CDS TCA 72 bp CAGCTCCCTGCTTCAGCTGGACATGGCCGCTTCCTTTaGCCTGTGCAATCCTGCTGTTGTCAATGGGCCCGG +
Preference number: 6 (lower is better)
Translates to: QLPASAGHGRFL*PVQSCCCQWAR
Trigger: CCGGGCCCATTGACAACAGCAGGATTGCACAGGTCAAAGGAAGCGGCCATGTCCAGCTGAAGCAGGGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000472108.1
ENST00000496927.5
CDS TCA 72 bp TTCCTTCTGCGGACGCAGAAATTGAGGCTCAAGGGGTaGGGCCACCGCCCCAAGCTCGAACGGTTGAGAGAG +
Preference number: 6 (lower is better)
Translates to: FLLRTQKLRLKG*GHRPKLERLRE
Trigger: CTCTCTCAACCGTTCGAGCTTGGGGCGGTGGCCTCACCCCTTGAGCCTCAATTTCTGCGTCCGCAGAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491053.5
CDS GCA 72 bp GCTCCGAGTTTGTACGCTGCTGGCCCCAGGAGAACTTaGGGTCCTTCATCCGCTCCTTCTCAGAGATGGCTC +
Preference number: 6 (lower is better)
Translates to: APSLYAAGPRRT*GPSSAPSQRWL
Trigger: GAGCCATCTCTGAGAAGGAGCGGATGAAGGACCGCAAGTTCTCCTGGGGCCAGCAGCGTACAAACTCGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS GCA 72 bp GAAGGTGTCGATCTCGATCCTCCTGCGCTTGGCCAGTaGCTCGATCTCCACCTGGCAGATGGAGCACACGTA +
Preference number: 6 (lower is better)
Translates to: EGVDLDPPALGQ*LDLHLADGAHV
Trigger: TACGTGTGCTCCATCTGCCAGGTGGAGATCGAGGCACTGGCCAAGCGCAGGAGGATCGAGATCGACACCTTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
ENST00000496927.5
CDS CCA 72 bp ATGGATGAGGCGCCTGAGCCACCCAATGCTCCTCTGTaGCAGTCTGAGGACCCAGCAGAGGGAATTTCCAGG +
Preference number: 6 (lower is better)
Translates to: MDEAPEPPNAPL*QSEDPAEGISR
Trigger: CCTGGAAATTCCCTCTGCTGGGTCCTCAGACTGCCACAGAGGAGCATTGGGTGGCTCAGGCGCCTCATCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472108.1
CDS CAA 72 bp TGTCCACATCAGCGTCCTCGTCCACTTGCTCCGAGTTaGTACGCTGCTGGCCCCAGGAGAACTTGCGGTCCT +
Preference number: 6 (lower is better)
Translates to: CPHQRPRPLAPS*YAAGPRRTCGP
Trigger: AGGACCGCAAGTTCTCCTGGGGCCAGCAGCGTACAAACTCGGAGCAAGTGGACGAGGACGCTGATGTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CAA 72 bp AGCCATGGCAGTGTCCACATCAGCGTCCTCGTCCACTaGCTCCGAGTTTGTACGCTGCTGGCCCCAGGAGAA +
Preference number: 6 (lower is better)
Translates to: SHGSVHISVLVH*LRVCTLLAPGE
Trigger: TTCTCCTGGGGCCAGCAGCGTACAAACTCGGAGCAAGTGGACGAGGACGCTGATGTGGACACTGCCATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS TCA 72 bp AGGAAGCGGCCAGCATTCGCATCCTTTGTTGACAGCTaGCAGCGACGGGCTATAGGGGTCTGGAGTGAGTGG +
Preference number: 6 (lower is better)
Translates to: RKRPAFASFVDS*QRRAIGVWSEW
Trigger: CCACTCACTCCAGACCCCTATAGCCCGTCGCTGTCAGCTGTCAACAAAGGATGCGAATGCTGGCCGCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000491053.5
ENST00000494971.2
CDS TCA 72 bp AAGTCCTCTTTGGTCACCTCTCCTATGGAGTCAAGGTaGGGGCAAAGGTCCCTGGAGTCCCCCATCCTGGCC +
Preference number: 6 (lower is better)
Translates to: KSSLVTSPMESR*GQRSLESPILA
Trigger: GGCCAGGATGGGGGACTCCAGGGACCTTTGCCCTCACCTTGACTCCATAGGAGAGGTGACCAAAGAGGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000491053.5
ENST00000494971.2
CDS TCA 72 bp CTGCACAAGGCTGAGAATGGAGCCGTCAAAGATGTCTaGGATGACGCTGCGGTAGCGCTGCTCCTTCCGCCT +
Preference number: 6 (lower is better)
Translates to: LHKAENGAVKDV*DDAAVALLLPP
Trigger: AGGCGGAAGGAGCAGCGCTACCGCAGCGTCATCTCAGACATCTTTGACGGCTCCATTCTCAGCCTTGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000491731.1
CDS TCA 72 bp TACAGGATACCACAAACCGTCGGATGTACTCCACAATaGAGGCCAGCCAGCCCTGGGCGGCATAGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: YRIPQTVGCTPQ*RPASPGRHSCP
Trigger: GGGACAGCTATGCCGCCCAGGGCTGGCTGGCCTTCATTGTGGAGTACATCCGACGGTTTGTGGTATCCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS GCA 72 bp TTCAGAGAACTTGGAAGAGGAGCCCAGCAGAGGGGCTaGCAGCCGCTGCTCCAGGAATACCTCCTTCTCACA +
Preference number: 6 (lower is better)
Translates to: FRELGRGAQQRG*QPLLQEYLLLT
Trigger: TGTGAGAAGGAGGTATTCCTGGAGCAGCGGCTGGCAGCCCCTCTGCTGGGCTCCTCTTCCAAGTTCTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CAA 72 bp TCAGCTCCCTGCTTCAGCTGGACATGGCCGCTTCCTTaGACCTGTGCAATCCTGCTGTTGTCAATGGGCCCG +
Preference number: 6 (lower is better)
Translates to: SAPCFSWTWPLP*TCAILLLSMGP
Trigger: CGGGCCCATTGACAACAGCAGGATTGCACAGGTCAAAGGAAGCGGCCATGTCCAGCTGAAGCAGGGAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000472108.1
ENST00000496927.5
CDS CAA 90 bp GCCTTGTTCAACTTGATGAAGGTGTCGATCTCGATCCTCCTGCGCTaGGCCAGTGCCTCGATCTCCACCTGGCAGATGGAGCACACGTAC +
Preference number: 6 (lower is better)
Translates to: ALFNLMKVSISILLR*ASASISTWQMEHTY
Trigger: GTACGTGTGCTCCATCTGCCAGGTGGAGATCGAGGCACTGGCCAAGCGCAGGAGGATCGAGATCGACACCTTCATCAAGTTGAACAAGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
ENST00000496927.5
CDS TCA 72 bp CCTCGGCGTTCTGCACCACCGTCTCGTGGACTTCTGTaGCGTACTGGTCATCAAACTCGTACCACTGCCCAT +
Preference number: 6 (lower is better)
Translates to: PRRSAPPSRGLL*RTGHQTRTTAH
Trigger: ATGGGCAGTGGTACGAGTTTGATGACCAGTACGTCACAGAAGTCCACGAGACGGTGGTGCAGAACGCCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
CDS GCA 72 bp TCTGGTAGCTCTTGCACAGGGCTGGCTTCTTATCTGTaGGCACCAGGCCGCCACACTCCAAGAAGAACTGAG +
Preference number: 6 (lower is better)
Translates to: SGSSCTGLASYL*APGRHTPRRTE
Trigger: CTCAGTTCTTCTTGGAGTGTGGCGGCCTGGTGCGCACAGATAAGAAGCCAGCCCTGTGCAAGAGCTACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS GCA 72 bp TATGCCAGACCTCAGAGACCAGCTTCTGGTAGCTCTTaGACAGGGCTGGCTTCTTATCTGTGCGCACCAGGC +
Preference number: 6 (lower is better)
Translates to: YARPQRPASGSS*TGLASYLCAPG
Trigger: GCCTGGTGCGCACAGATAAGAAGCCAGCCCTGTGCAAGAGCTACCAGAAGCTGGTCTCTGAGGTCTGGCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS GCA 72 bp GACCACTGTGCTGGTGGCTCAGTAGCTGGGCTGGGATaGCCTCGAAGGTGCCTTATTGGCTCTGTTAGCTTT +
Preference number: 6 (lower is better)
Translates to: DHCAGGSVAGLG*PRRCLIGSVSF
Trigger: AAAGCTAACAGAGCCAATAAGGCACCTTCGAGGGCATCCCAGCCCAGCTACTGAGCCACCAGCACAGTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491053.5
CDS CCA 72 bp AGCTCCTCCCAGGACCTCCCTGGTTCCCCAAATGCATaGACTTCACTGTGTACTGTCTCCCGCCCAGGAAAA +
Preference number: 6 (lower is better)
Translates to: SSSQDLPGSPNA*TSLCTVSRPGK
Trigger: TTTTCCTGGGCGGGAGACAGTACACAGTGAAGTCCATGCATTTGGGGAACCAGGGAGGTCCTGGGAGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491731.1
CDS CAA 72 bp AGGTCGAGCCCCTCGAGGGGGAAGGAGACGTGGCTGTaGATCTTGAATGAGTACATCACCTCGTGCCGAAAG +
Preference number: 6 (lower is better)
Translates to: RSSPSRGKETWL*ILNEYITSCRK
Trigger: CTTTCGGCACGAGGTGATGTACTCATTCAAGATCAACAGCCACGTCTCCTTCCCCCTCGAGGGGCTCGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CAA 72 bp AACTTGATGAAGGTGTCGATCTCGATCCTCCTGCGCTaGGCCAGTGCCTCGATCTCCACCTGGCAGATGGAG +
Preference number: 6 (lower is better)
Translates to: NLMKVSISILLR*ASASISTWQME
Trigger: CTCCATCTGCCAGGTGGAGATCGAGGCACTGGCCAAGCGCAGGAGGATCGAGATCGACACCTTCATCAAGTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
ENST00000496927.5
CDS TCA 72 bp GTCACTGCTCGAGTCACAGGACAAGAACTCATCTTCTaGTGGGCTCCGGTCACCCTCCCGTTTCTCATCCGT +
Preference number: 6 (lower is better)
Translates to: VTARVTGQELIF*WAPVTLPFLIR
Trigger: ACGGATGAGAAACGGGAGGGTGACCGGAGCCCATCAGAAGATGAGTTCTTGTCCTGTGACTCGAGCAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS TCA 72 bp TGTTGTACAGGTGCTCCCAGACGTTCTGGGGCAGGATaGCCACCAGGTCGTCGATGTAGTGGTATTTGTGGG +
Preference number: 6 (lower is better)
Translates to: CCTGAPRRSGAG*PPGRRCSGICG
Trigger: CCCACAAATACCACTACATCGACGACCTGGTGGTCATCCTGCCCCAGAACGTCTGGGAGCACCTGTACAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000474895.6
CDS GCA 72 bp GGTGAATGCACAGGATCTCGGGCAACCGCAGGACTTTaGAGTACTTCACTCCGTTCCGCAGCTTCTTACACC +
Preference number: 6 (lower is better)
Translates to: GECTGSRATAGL*STSLRSAASYT
Trigger: GGTGTAAGAAGCTGCGGAACGGAGTGAAGTACTGCAAAGTCCTGCGGTTGCCCGAGATCCTGTGCATTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CCA 72 bp TCATCAGCCACAGCAATAGGAACAGCTTTCAGAGGGTaGGAGGGTGGCGGGGAGTCCTGTTCAGAGAACTTG +
Preference number: 6 (lower is better)
Translates to: SSATAIGTAFRG*EGGGESCSENL
Trigger: CAAGTTCTCTGAACAGGACTCCCCGCCACCCTCCCACCCTCTGAAAGCTGTTCCTATTGCTGTGGCTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CAA 72 bp AGCCCCTCGAGGGGGAAGGAGACGTGGCTGTTGATCTaGAATGAGTACATCACCTCGTGCCGAAAGCGCTTT +
Preference number: 6 (lower is better)
Translates to: SPSRGKETWLLI*NEYITSCRKRF
Trigger: AAAGCGCTTTCGGCACGAGGTGATGTACTCATTCAAGATCAACAGCCACGTCTCCTTCCCCCTCGAGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CCA 72 bp CTCTTGGGTGTCCTGCTGGGCATAGCCTCGGAACATTaGGTTGACCAACTTGATCCCATGAGACAGACTGGT +
Preference number: 6 (lower is better)
Translates to: LLGVLLGIASEH*VDQLDPMRQTG
Trigger: ACCAGTCTGTCTCATGGGATCAAGTTGGTCAACCCAATGTTCCGAGGCTATGCCCAGCAGGACACCCAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS CCA 72 bp AGGTCCTCCTTTCCAGGAATGGGCAGTGATAAGTCCTaGAACGTTTCCACTGTGGTGGATACCCGGTCACAG +
Preference number: 6 (lower is better)
Translates to: RSSFPGMGSDKS*NVSTVVDTRSQ
Trigger: CTGTGACCGGGTATCCACCACAGTGGAAACGTTCCAGGACTTATCACTGCCCATTCCTGGAAAGGAGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000491731.1
CDS CCA 72 bp CTGAATGGAGCTTGGCCAGGTCCTCCTTTCCAGGAATaGGCAGTGATAAGTCCTGGAACGTTTCCACTGTGG +
Preference number: 6 (lower is better)
Translates to: LNGAWPGPPFQE*AVISPGTFPLW
Trigger: CCACAGTGGAAACGTTCCAGGACTTATCACTGCCCATTCCTGGAAAGGAGGACCTGGCCAAGCTCCATTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
ENST00000491731.1
CDS CAA 90 bp CTGGGCTGGGATGCCCTCGAAGGTGCCTTATTGGCTCTGTTAGCTTaGGATTCCGCGGGGAATCACTCAGCTTATGCATTGCTGCTTCTT +
Preference number: 6 (lower is better)
Translates to: LGWDALEGALLALLA*DSAGNHSAYALLLL
Trigger: AAGAAGCAGCAATGCATAAGCTGAGTGATTCCCCGCGGAATCCAAAGCTAACAGAGCCAATAAGGCACCTTCGAGGGCATCCCAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491053.5
CDS TCA 72 bp AATGAGTACATCACCTCGTGCCGAAAGCGCTTTAGGTaGATGCACAGGATCTCGGGCAACCGCAGGACTTTG +
Preference number: 6 (lower is better)
Translates to: NEYITSCRKRFR*MHRISGNRRTL
Trigger: CAAAGTCCTGCGGTTGCCCGAGATCCTGTGCATTCACCTAAAGCGCTTTCGGCACGAGGTGATGTACTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315480.9
ENST00000358355.5
ENST00000372429.8
CDS GCA 72 bp CAATCCTGGCCACTTCAAAGTAGCCAAGAAATCCCCTaGATATTAAGCCAACTCCTCTGCAGGCTTCGGCCC +
Preference number: 6 (lower is better)
Translates to: QSWPLQSSQEIP*ILSQLLCRLRP
Trigger: GGGCCGAAGCCTGCAGAGGAGTTGGCTTAATATGCAGGGGATTTCTTGGCTACTTTGAAGTGGCCAGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491731.1
CDS CAA 72 bp GATGCCCTCGAAGGTGCCTTATTGGCTCTGTTAGCTTaGGATTCCGCGGGGAATCACTCAGCTTATGCATTG +
Preference number: 6 (lower is better)
Translates to: DALEGALLALLA*DSAGNHSAYAL
Trigger: CAATGCATAAGCTGAGTGATTCCCCGCGGAATCCAAAGCTAACAGAGCCAATAAGGCACCTTCGAGGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491053.5