RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000036672

Ensembl transcript IDs: ENST00000260187.7, ENST00000455332.6, ENST00000525189.5, ENST00000525735.1, ENST00000527843.1, ENST00000531070.1, ENST00000532613.1

Found 425 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTaGCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACCC +
Preference number: 1 (lower is better)
Translates to: RGHGAMLAPRPGDLP*RATAQESPAPCSRP
Trigger: GGGTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
3UTR CCA 90 bp TCCCCTGGAGTTAGCAGCGTGAAGAGGGCTCTTGGCTCATGGCTCTaGACCGGCGAGCCGTGCGGGTGGAGATGGGCGCCGGCTCCTCCG +
Preference number: 1 (lower is better)
Translates to: SPGVSSVKRALGSWL*TGEPCGWRWAPAPP
Trigger: CGGAGGAGCCGGCGCCCATCTCCACCCGCACGGCTCGCCGGTCCAGAGCCATGAGCCAAGAGCCCTCTTCACGCTGCTAACTCCAGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR CCA 90 bp CGTCTGTCCCCTGGAGTTAGCAGCGTGAAGAGGGCTCTTGGCTCATaGCTCTGGACCGGCGAGCCGTGCGGGTGGAGATGGGCGCCGGCT +
Preference number: 1 (lower is better)
Translates to: RLSPGVSSVKRALGS*LWTGEPCGWRWAPA
Trigger: AGCCGGCGCCCATCTCCACCCGCACGGCTCGCCGGTCCAGAGCCATGAGCCAAGAGCCCTCTTCACGCTGCTAACTCCAGGGGACAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR TCA 90 bp GCTCCAGCTCCCAGGGCAGGACTGGAGACCAGCGCTAAGAAGAGCTaGGGGGTGGCCTGGGCATCCCTGAGAAACTCGGTCCAAAGGGCC +
Preference number: 1 (lower is better)
Translates to: APAPRAGLETSAKKS*GVAWASLRNSVQRA
Trigger: GGCCCTTTGGACCGAGTTTCTCAGGGATGCCCAGGCCACCCCTCAGCTCTTCTTAGCGCTGGTCTCCAGTCCTGCCCTGGGAGCTGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR CCA 90 bp GACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTaGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGG +
Preference number: 1 (lower is better)
Translates to: DHKFTNANAEGTGRC*LHVQAIFPAGPQLR
Trigger: CCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
3UTR GCA 90 bp GAAGACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATaGTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTC +
Preference number: 1 (lower is better)
Translates to: EDHKFTNANAEGTGR*WLHVQAIFPAGPQL
Trigger: GAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
3UTR TCA 90 bp TGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACCCTaGTCAGGCTGCATCCACTCCTGCTCGGCAGCTTCAGGTTTGTTT +
Preference number: 1 (lower is better)
Translates to: CRATAQESPAPCSRP*SGCIHSCSAASGLF
Trigger: AAACAAACCTGAAGCTGCCGAGCAGGAGTGGATGCAGCCTGATCAGGGTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
3UTR TCA 90 bp GTTTTCCAAAGATGTCCCTTCGTCTGTCCCCTGGAGTTAGCAGCGTaGAGAGGGCTCTTGGCTCATGGCTCTGGACCGGCGAGCCGTGCG +
Preference number: 1 (lower is better)
Translates to: VFQRCPFVCPLELAA*RGLLAHGSGPASRA
Trigger: CGCACGGCTCGCCGGTCCAGAGCCATGAGCCAAGAGCCCTCTTCACGCTGCTAACTCCAGGGGACAGACGAAGGGACATCTTTGGAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR CCA 90 bp AGAGAAGCTCTAGGGACGAGGGGCTTGTGCTATCCTTCAAACAGCTaGGGAGCAGACCAGGGGTGGGCTAGAGGACGTGGGCGGGAAGAA +
Preference number: 1 (lower is better)
Translates to: REALGTRGLCYPSNS*GADQGWARGRGREE
Trigger: TTCTTCCCGCCCACGTCCTCTAGCCCACCCCTGGTCTGCTCCCCAGCTGTTTGAAGGATAGCACAAGCCCCTCGTCCCTAGAGCTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR GCA 90 bp GATGCCCTGTCGGAAGGAATCTACCTGCTTTCTTCTTTGCCTCACTaGAATGCACAACGAGCCAGGGCTAAGGGCAGGATCCCTTTCCCA +
Preference number: 1 (lower is better)
Translates to: DALSEGIYLLSSLPH*NAQRARAKGRIPFP
Trigger: TGGGAAAGGGATCCTGCCCTTAGCCCTGGCTCGTTGTGCATTGCAGTGAGGCAAAGAAGAAAGCAGGTAGATTCCTTCCGACAGGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR GCA 90 bp GACGTGGGCGGGAAGAACTTGATGCCCTGTCGGAAGGAATCTACCTaGTTTCTTCTTTGCCTCACTGCAATGCACAACGAGCCAGGGCTA +
Preference number: 1 (lower is better)
Translates to: DVGGKNLMPCRKEST*FLLCLTAMHNEPGL
Trigger: TAGCCCTGGCTCGTTGTGCATTGCAGTGAGGCAAAGAAGAAAGCAGGTAGATTCCTTCCGACAGGGCATCAAGTTCTTCCCGCCCACGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR CCA 90 bp TTCTTCTACTCTTGCTTACACAGTAAACAAGTGTACACTTGCCCTTaGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTGTCAGGCCA +
Preference number: 1 (lower is better)
Translates to: FFYSCLHSKQVYTCP*AQVHRSSLEKGVRP
Trigger: TGGCCTGACACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGCAAGAGTAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR GCA 90 bp GAAGCTCTAGGGACGAGGGGCTTGTGCTATCCTTCAAACAGCTGGGGAGCAGACTGGACCGGCGAGCCGTaGGGGTGGAGATGGGCGCCG +
Preference number: 2 (lower is better)
Translates to: EALGTRGLCYPSNSWGADWTGEP*GWRWAP
Trigger: CGGCGCCCATCTCCACCCGCACGGCTCGCCGGTCCA...GTCTGCTCCCCAGCTGTTTGAAGGATAGCACAAGCCCCTCGTCCCTAGAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR GCA 90 bp TCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCGGCTGCATCCACTCCTaGTCGGCAGCTTCAGGTTTG +
Preference number: 2 (lower is better)
Translates to: SRRSSLPGHSSGKPGSLLGCIHS*SAASGL
Trigger: CAAACCTGAAGCTGCCGAGCAGGAGTGGATGCAGCC...GAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
3UTR-3UTR GCA 90 bp TGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCGGCTGCATCCACTCCTaGTCGGCAGCTTCAGGTTTG +
Preference number: 2 (lower is better)
Translates to: CWLHVQAIFPAGPQLRKAGCIHS*SAASGL
Trigger: CAAACCTGAAGCTGCCGAGCAGGAGTGGATGCAGCC...GGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
3UTR-3UTR CCA 90 bp CCCACAGGAAAGAACCATACAACTGAGGCAAGATGTCCCCAAATACCCAGGCTCGGCGAGCCGTGCGGGTaGAGATGGGCGCCGGCTCCT +
Preference number: 2 (lower is better)
Translates to: PTGKNHTTEARCPQIPRLGEPCG*RWAPAP
Trigger: AGGAGCCGGCGCCCATCTCCACCCGCACGGCTCGCC...GAGCCTGGGTATTTGGGGACATCTTGCCTCAGTTGTATGGTTCTTTCCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR CCA 90 bp GAAGCTCTAGGGACGAGGGGCTTGTGCTATCCTTCAAACAGCTGGGGAGCAGACAGGGCTCTTGGCTCATaGCTCTGGACCGGCGAGCCG +
Preference number: 2 (lower is better)
Translates to: EALGTRGLCYPSNSWGADRALGS*LWTGEP
Trigger: CGGCTCGCCGGTCCAGAGCCATGAGCCAAGAGCCCT...GTCTGCTCCCCAGCTGTTTGAAGGATAGCACAAGCCCCTCGTCCCTAGAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR CCA 90 bp CAAGTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTCTTGGCTCATGGCTCTaGACCGGCGAGCCGTGCGGG +
Preference number: 2 (lower is better)
Translates to: QVYTCPWAQVHRSSLEKGLGSWL*TGEPCG
Trigger: CCCGCACGGCTCGCCGGTCCAGAGCCATGAGCCAAG...ACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR CAA 90 bp GGGGAGCAGACCAGGGGTGGGCTAGAGGACGTGGGCGGGAAGAACTaGATGCCCTGTCGGAAGGAATCTACCTGCTTTCTTCTTTGCCTC +
Preference number: 2 (lower is better)
Translates to: GEQTRGGLEDVGGKN*MPCRKESTCFLLCL
Trigger: GAGGCAAAGAAGAAAGCAGGTAGATTCCTTCCGACAGGGCATCAAGTTCTTCCCGCCCACGTCCTCTAGCCCACCCCTGGTCTGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR GCA 90 bp ACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGGGCTGCATCCACTCCTaGTCGGCAGCTTCAGGTTTG +
Preference number: 2 (lower is better)
Translates to: TTSLQMQTPRARGDAGSTGCIHS*SAASGL
Trigger: CAAACCTGAAGCTGCCGAGCAGGAGTGGATGCAGCC...CGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
3UTR-3UTR CCA 90 bp CCCACAGGAAAGAACCATACAACTGAGGCAAGATGTCCCCAAATACCCAGGCTCTACTGTGGCTGTGCTTaGGGCCTGGCCAACGCCCAC +
Preference number: 2 (lower is better)
Translates to: PTGKNHTTEARCPQIPRLYCGCA*GLANAH
Trigger: GTGGGCGTTGGCCAGGCCCCAAGCACAGCCACAGTA...GAGCCTGGGTATTTGGGGACATCTTGCCTCAGTTGTATGGTTCTTTCCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR TCA 90 bp TCTACTCTTGCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTCAGGTTCTTGTCTAGGAGGCTCTaGGAAGGGGGCGGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: STLAYTVNKCTLALGLRFLSRRL*EGGGGR
Trigger: CCTGCCCCCGCCCCCTTCTCAGAGCCTCCTAGACAA...GAACCTGAGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGCAAGAGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR GCA 90 bp TGCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTCCAGGCGATCTTCCCTaGCGGGCCACAGCTCAGGAA +
Preference number: 2 (lower is better)
Translates to: CLHSKQVYTCPWAQVHRSPGDLP*RATAQE
Trigger: TTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGG...AGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR TCA 90 bp CCCACAGGAAAGAACCATACAACTGAGGCAAGATGTCCCCAAATACCCAGGCTCTTTCCCAGGCGGGTTTaGACAGAGCACTGGGGAAAA +
Preference number: 2 (lower is better)
Translates to: PTGKNHTTEARCPQIPRLFPRRV*TEHWGK
Trigger: TTTTCCCCAGTGCTCTGTTCAAACCCGCCTGGGAAA...GAGCCTGGGTATTTGGGGACATCTTGCCTCAGTTGTATGGTTCTTTCCTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR GCA 90 bp GGACGTGGGCGGGAAGAACTTGATGCCCTGTCGGAAGGAATCTACCTGCTTTCTCCCCTGGTCCCCAAATaGTATAAGGCACAATTCTTG +
Preference number: 2 (lower is better)
Translates to: GRGREELDALSEGIYLLSPLVPK*YKAQFL
Trigger: CAAGAATTGTGCCTTATAGCATTTGGGGACCAGGGG...AGAAAGCAGGTAGATTCCTTCCGACAGGGCATCAAGTTCTTCCCGCCCACGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR TCA 90 bp TGTGTGGGTGAACAGCTTTACTCTCCAGGACAGCACAGAGTTTTATCCAACTATCTGGAGTTAGCAGCGTaGAGAGGGCTCTTGGCTCAT +
Preference number: 2 (lower is better)
Translates to: CVGEQLYSPGQHRVLSNYLELAA*RGLLAH
Trigger: ATGAGCCAAGAGCCCTCTTCACGCTGCTAACTCCAG...ATAGTTGGATAAAACTCTGTGCTGTCCTGGAGAGTAAAGCTGTTCACCCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR GCA 90 bp CCCACAGGAAAGAACCATACAACTGAGGCAAGATGTCCCCAAATACCCAGGCTCCGGAAGGAATCTACCTaGTTTCTTCTTTGCCTCACT +
Preference number: 2 (lower is better)
Translates to: PTGKNHTTEARCPQIPRLRKEST*FLLCLT
Trigger: AGTGAGGCAAAGAAGAAAGCAGGTAGATTCCTTCCG...GAGCCTGGGTATTTGGGGACATCTTGCCTCAGTTGTATGGTTCTTTCCTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR CAA 90 bp CTCTCCAGGACAGCACAGAGTTTTATCCAACTATGTAGGGCAAAATaGAGCCCACAGGAAAGAACCATACAACTGAGGCAAGATGTCCCC +
Preference number: 2 (lower is better)
Translates to: LSRTAQSFIQLCRAK*SPQERTIQLRQDVP
Trigger: GGGGACATCTTGCCTCAGTTGTATGGTTCTTTCCTGTGGGCTCAATTTTGCCCTACATAGTTGGATAAAACTCTGTGCTGTCCTGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR TCA 90 bp TGTGTGGGTGAACAGCTTTACTCTCCAGGACAGCACAGAGTTTTATCCAACTATTTTCCCAGGCGGGTTTaGACAGAGCACTGGGGAAAA +
Preference number: 2 (lower is better)
Translates to: CVGEQLYSPGQHRVLSNYFPRRV*TEHWGK
Trigger: TTTTCCCCAGTGCTCTGTTCAAACCCGCCTGGGAAA...ATAGTTGGATAAAACTCTGTGCTGTCCTGGAGAGTAAAGCTGTTCACCCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR TCA 90 bp ACATTCTTCTACTCTTGCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTTGGGCGGGAAGAACTTaGTGCCCTGTCGGAAGGAAT +
Preference number: 2 (lower is better)
Translates to: TFFYSCLHSKQVYTCPWAWAGRT*CPVGRN
Trigger: ATTCCTTCCGACAGGGCATCAAGTTCTTCCCGCCCA...AGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGCAAGAGTAGAAGAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR TCA 90 bp GCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTAGACACAGTTGTTTCTaGCACATAGGAAGACCACAA +
Preference number: 2 (lower is better)
Translates to: AYTVNKCTLALGLRFTGLRHSCF*HIGRPQ
Trigger: TTGTGGTCTTCCTATGTGTCAGAAACAACTGTGTCT...AAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR GCA 90 bp ACATTCTTCTACTCTTGCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTTCTTCTTTGCCTCACTaGAATGCACAACGAGCCAGG +
Preference number: 2 (lower is better)
Translates to: TFFYSCLHSKQVYTCPWASSLPH*NAQRAR
Trigger: CCTGGCTCGTTGTGCATTGCAGTGAGGCAAAGAAGA...AGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGCAAGAGTAGAAGAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR CCA 90 bp TGCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTATAAGGCACAATTCTTaGAGGCAACTAAATTCCATT +
Preference number: 2 (lower is better)
Translates to: CLHSKQVYTCPWAQVHRSIRHNS*RQLNSI
Trigger: AATGGAATTTAGTTGCCTCCAAGAATTGTGCCTTAT...AGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR CCA 72 bp TCATGGCTCTGGACCGGCGAGCCGTGCGGGTGGAGATaGGCGCCGGCTCCTCCGCGGCGCGGGCGTCCAGGC +
Preference number: 3 (lower is better)
Translates to: SWLWTGEPCGWR*APAPPRRGRPG
Trigger: GCCTGGACGCCCGCGCCGCGGAGGAGCCGGCGCCCATCTCCACCCGCACGGCTCGCCGGTCCAGAGCCATGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR CCA 72 bp CTTGGCTCATGGCTCTGGACCGGCGAGCCGTGCGGGTaGAGATGGGCGCCGGCTCCTCCGCGGCGCGGGCGT +
Preference number: 3 (lower is better)
Translates to: LGSWLWTGEPCG*RWAPAPPRRGR
Trigger: ACGCCCGCGCCGCGGAGGAGCCGGCGCCCATCTCCACCCGCACGGCTCGCCGGTCCAGAGCCATGAGCCAAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR GCA 72 bp GGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTaGCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGC +
Preference number: 3 (lower is better)
Translates to: GAMLAPRPGDLP*RATAQESPAPC
Trigger: GCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
3UTR CCA 72 bp GTTAGCAGCGTGAAGAGGGCTCTTGGCTCATGGCTCTaGACCGGCGAGCCGTGCGGGTGGAGATGGGCGCCG +
Preference number: 3 (lower is better)
Translates to: VSSVKRALGSWL*TGEPCGWRWAP
Trigger: CGGCGCCCATCTCCACCCGCACGGCTCGCCGGTCCAGAGCCATGAGCCAAGAGCCCTCTTCACGCTGCTAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR CAA 90 bp ATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCGGAAAGCCCGGCTCCTaGCTCCAGACCCTGATCAGG +
Preference number: 3 (lower is better)
Translates to: MQTPRARGDAGSTSRRSSGKPGS*LQTLIR
Trigger: CCTGATCAGGGTCTGGAGCAAGGAGCCGGGCTTTCC...GGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
3UTR CCA 72 bp CCTGGAGTTAGCAGCGTGAAGAGGGCTCTTGGCTCATaGCTCTGGACCGGCGAGCCGTGCGGGTGGAGATGG +
Preference number: 3 (lower is better)
Translates to: PGVSSVKRALGS*LWTGEPCGWRW
Trigger: CCATCTCCACCCGCACGGCTCGCCGGTCCAGAGCCATGAGCCAAGAGCCCTCTTCACGCTGCTAACTCCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR TCA 72 bp CCCAGGGCAGGACTGGAGACCAGCGCTAAGAAGAGCTaGGGGGTGGCCTGGGCATCCCTGAGAAACTCGGTC +
Preference number: 3 (lower is better)
Translates to: PRAGLETSAKKS*GVAWASLRNSV
Trigger: GACCGAGTTTCTCAGGGATGCCCAGGCCACCCCTCAGCTCTTCTTAGCGCTGGTCTCCAGTCCTGCCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR CCA 72 bp TTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTaGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCA +
Preference number: 3 (lower is better)
Translates to: FTNANAEGTGRC*LHVQAIFPAGP
Trigger: TGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
3UTR GCA 72 bp AAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATaGTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGG +
Preference number: 3 (lower is better)
Translates to: KFTNANAEGTGR*WLHVQAIFPAG
Trigger: CCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
3UTR TCA 72 bp ACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACCCTaGTCAGGCTGCATCCACTCCTGCTCGGCAGCTTCA +
Preference number: 3 (lower is better)
Translates to: TAQESPAPCSRP*SGCIHSCSAAS
Trigger: TGAAGCTGCCGAGCAGGAGTGGATGCAGCCTGATCAGGGTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
3UTR TCA 72 bp AGATGTCCCTTCGTCTGTCCCCTGGAGTTAGCAGCGTaGAGAGGGCTCTTGGCTCATGGCTCTGGACCGGCG +
Preference number: 3 (lower is better)
Translates to: RCPFVCPLELAA*RGLLAHGSGPA
Trigger: CGCCGGTCCAGAGCCATGAGCCAAGAGCCCTCTTCACGCTGCTAACTCCAGGGGACAGACGAAGGGACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR TCA 72 bp GCTCCACGGGGCACAAGCCGGGCCCAGCTGTGTGGGTaGACAGCTTTACTCTCCAGGACAGCACAGAGTTTT +
Preference number: 3 (lower is better)
Translates to: APRGTSRAQLCG*TALLSRTAQSF
Trigger: AAAACTCTGTGCTGTCCTGGAGAGTAAAGCTGTTCACCCACACAGCTGGGCCCGGCTTGTGCCCCGTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR CAA 90 bp GAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCAAGGTTTGTTTTTCTCTaGTCAGGTTTGTGTGTTGTT +
Preference number: 3 (lower is better)
Translates to: EGTGRCWLHVQAIFPAGPRFVFL*SGLCVV
Trigger: AACAACACACAAACCTGACAAGAGAAAAACAAACCT...TGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
3UTR-3UTR CAA 90 bp GCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACTCGGCAGCTTCAGGTTaGTTTTTCTCTTGTCAGGTT +
Preference number: 3 (lower is better)
Translates to: AIFPAGPQLRKARLLAPDSAASG*FFSCQV
Trigger: AACCTGACAAGAGAAAAACAAACCTGAAGCTGCCGA...GTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
3UTR-3UTR CAA 90 bp CCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTTCGGCAGCTTCAGGTTaGTTTTTCTCTTGTCAGGTT +
Preference number: 3 (lower is better)
Translates to: PQVYKCKRRGHGAMLAPRSAASG*FFSCQV
Trigger: AACCTGACAAGAGAAAAACAAACCTGAAGCTGCCGA...ACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
3UTR-3UTR CAA 90 bp GACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACTCGGCAGCTTCAGGTTaGTTTTTCTCTTGTCAGGTT +
Preference number: 3 (lower is better)
Translates to: DHKFTNANAEGTGRCWLHSAASG*FFSCQV
Trigger: AACCTGACAAGAGAAAAACAAACCTGAAGCTGCCGA...GTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
3UTR GCA 72 bp ATGCCCTGTCGGAAGGAATCTACCTGCTTTCTTCTTTaGCTCACTGCAATGCACAACGAGCCAGGGCTAAGG +
Preference number: 3 (lower is better)
Translates to: MPCRKESTCFLL*LTAMHNEPGLR
Trigger: CCTTAGCCCTGGCTCGTTGTGCATTGCAGTGAGGCAAAGAAGAAAGCAGGTAGATTCCTTCCGACAGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR CAA 90 bp TGTGTGGGTGAACAGCTTTACTCTCCAGGACAGCACAGAGTTTTATCCAACTATGGAAAGCCCGGCTCCTaGCTCCAGACCCTGATCAGG +
Preference number: 3 (lower is better)
Translates to: CVGEQLYSPGQHRVLSNYGKPGS*LQTLIR
Trigger: CCTGATCAGGGTCTGGAGCAAGGAGCCGGGCTTTCC...ATAGTTGGATAAAACTCTGTGCTGTCCTGGAGAGTAAAGCTGTTCACCCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR CAA 90 bp ACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGTTTGTTTTTCTCTaGTCAGGTTTGTGTGTTGTT +
Preference number: 3 (lower is better)
Translates to: TSLQMQTPRARGDAGSTSRFVFL*SGLCVV
Trigger: AACAACACACAAACCTGACAAGAGAAAAACAAACCT...GGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
3UTR CCA 72 bp TCTTGCTTACACAGTAAACAAGTGTACACTTGCCCTTaGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGT +
Preference number: 3 (lower is better)
Translates to: SCLHSKQVYTCP*AQVHRSSLEKG
Trigger: ACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR-3UTR CAA 90 bp ACATTCTTCTACTCTTGCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTCTAGGGACGAGGGGCTaGTGCTATCCTTCAAACAGC +
Preference number: 3 (lower is better)
Translates to: TFFYSCLHSKQVYTCPWALGTRG*CYPSNS
Trigger: GCTGTTTGAAGGATAGCACAAGCCCCTCGTCCCTAG...AGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGCAAGAGTAGAAGAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp CGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCTGGACCGGCGAGCCGTaGGGGTGGAGATGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: RGHGAMLAPRPGDLPCRAWTGEP*GWRWAP
Trigger: CGGCGCCCATCTCCACCCGCACGGCTCGCCGGTCCA...GGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp CGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCAGTCCCGGCTGGCGCTaGCGCGGCGCAGTGAGCACC +
Preference number: 4 (lower is better)
Translates to: RGHGAMLAPRPGDLPCRASPGWR*RGAVST
Trigger: GGTGCTCACTGCGCCGCGCCAGCGCCAGCCGGGACT...GGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp GAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCAGCATGGAGCTGCGGGTaGGTCCCGGCTGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: EGTGRCWLHVQAIFPAGPAWSCG*VPAGAG
Trigger: GCCAGCGCCAGCCGGGACTCACCCGCAGCTCCATGC...TGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp GAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCATGGACCGGCGAGCCGTaGGGGTGGAGATGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: EGTGRCWLHVQAIFPAGPWTGEP*GWRWAP
Trigger: CGGCGCCCATCTCCACCCGCACGGCTCGCCGGTCCA...TGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp CCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCGGAGTCCCCGCGCGGTaGCACAGTCCGGACGCCGAG +
Preference number: 4 (lower is better)
Translates to: PGDLPCRATAQESPAPCSGVPAR*HSPDAE
Trigger: CTCGGCGTCCGGACTGTGGCACCGCGCGGGGACTCC...GGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525735.1
CDS-3UTR CCA 90 bp GGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACACTTGGCTCATGGCTCTaGACCGGCGAGCCGTGCGGG +
Preference number: 4 (lower is better)
Translates to: GHGAMLAPRPGDLPCRATLGSWL*TGEPCG
Trigger: CCCGCACGGCTCGCCGGTCCAGAGCCATGAGCCAAG...TGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp CCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCAGGGCTCTTGGCTCATaGCTCTGGACCGGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: PRARGDAGSTSRRSSLPGRALGS*LWTGEP
Trigger: CGGCTCGCCGGTCCAGAGCCATGAGCCAAGAGCCCT...GCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp GAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCAGGAGCAGACCAGGGGTaGGCTAGAGGACGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: EGTGRCWLHVQAIFPAGPGADQG*ARGRGR
Trigger: CCGCCCACGTCCTCTAGCCCACCCCTGGTCTGCTCC...TGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp GAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCAGATTTCAGGGACTCGTaGGGGAGGGGCCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: EGTGRCWLHVQAIFPAGPDFRDS*GRGLGG
Trigger: CCCTCCCAGGCCCCTCCCTCACGAGTCCCTGAAATC...TGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR TCA 90 bp CCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCCGGGCGTCCAGGCGGTaGTGCTCCCAGCGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PGDLPCRATAQESPAPCSRASRR*CSQRAP
Trigger: TGGAGCTCGCTGGGAGCATCACCGCCTGGACGCCCG...GGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp CCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCCAGGCGATCTTCCCTaGCGGGCCACAGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: PRARGDAGSTSRRSSLPGPGDLP*RATAQE
Trigger: TTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGG...GCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp GCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACGGCGAGCCGTGCGGGTaGAGATGGGCGCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: AIFPAGPQLRKARLLAPDGEPCG*RWAPAP
Trigger: AGGAGCCGGCGCCCATCTCCACCCGCACGGCTCGCC...GTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp TCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCGGGCCAGCATGGGGCTaGGGCCCAGGTTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SRRSSLPGHSSGKPGSLLGPAWG*GPGSWG
Trigger: ACCCCAGGAACCTGGGCCGCAGCCCCATGCTGGCCC...GAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR GCA 90 bp CGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCCACGAGGGCTGTGTGTaGATTGCTGCCGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: RGHGAMLAPRPGDLPCRAHEGCV*IAAVVQ
Trigger: CTGCACCACGGCAGCAATGCACACACAGCCCTCGTG...GGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp GCTCCCAGCGAGCTCCAGAGGGCGCTGTCCCCTCGGAGGCGCGGGCGCTGCGGCAGCGAGCTCTTTAGCTaGCCAACAAAGAGATCCCCG +
Preference number: 4 (lower is better)
Translates to: APSELQRALSPRRRGRCGSELFS*PTKRSP
Trigger: CGGGGATCTCTTTGTTGGGCAGCTAAAGAGCTCGCT...GCCGCAGCGCCCGCGCCTCCGAGGGGACAGCGCCCTCTGGAGCTCGCTGGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp GAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCAGGTAGGCGTCGCTGGTaGGCACTTGGCTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: EGTGRCWLHVQAIFPAGPGRRRW*ALGWRT
Trigger: TGTCCTCCAGCCAAGTGCGCACCAGCGACGCCTACC...TGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp GAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACCAGGCGATCTTCCCTaGCGGGCCACAGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: EGTGRCWLHVQAIFPAGPPGDLP*RATAQE
Trigger: TTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGG...TGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp GCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACGAGGGCACGGGGCGATaGTGGCTCCACGTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: AIFPAGPQLRKARLLAPDEGTGR*WLHVQA
Trigger: CGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTC...GTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp AGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGGAGGCAGCCAGATTaGCCCCATAGGAGGACGGGG +
Preference number: 4 (lower is better)
Translates to: RARGDAGSTSRRSSLPGHRRQPD*PHRRTG
Trigger: CCCCGTCCTCCTATGGGGCCAATCTGGCTGCCTCCT...GTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CCA 90 bp CGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCTGGCTGTCCAGCTTCTaGGTTAGGGTCACCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RGHGAMLAPRPGDLPCRAWLSSF*VRVTPW
Trigger: CCAGGGGGTGACCCTAACCCAGAAGCTGGACAGCCA...GGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CCA 90 bp CCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCTCGCTGGTGCGCACTTaGCTGGAGGACATGGGAGTG +
Preference number: 4 (lower is better)
Translates to: PRARGDAGSTSRRSSLPGSLVRT*LEDMGV
Trigger: CACTCCCATGTCCTCCAGCCAAGTGCGCACCAGCGA...GCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp CGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCTTCGGGAGGGCGGGCTaGCCAGTTCGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RGHGAMLAPRPGDLPCRAFGRAG*PVRRRA
Trigger: TGCTCTTCTACGAACTGGCCAGCCCGCCCTCCCGAA...GGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp AATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCGCCTCATCGCGCCTaGGCCGGCAGAGCCACACCC +
Preference number: 4 (lower is better)
Translates to: NANAEGTGRCWLHVQAIFPPHRA*AGRATP
Trigger: GGGTGTGGCTCTGCCGGCCCAGGCGCGATGAGGCGG...GAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455332.6
CDS-3UTR TCA 90 bp CGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCCTTAGCAATGGGCAGTaGGAGGTCCCAGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: RGHGAMLAPRPGDLPCRALSNGQ*EVPEGV
Trigger: GACCCCTTCTGGGACCTCTCACTGCCCATTGCTAAG...GGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp GAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACTGTGTGTGCATTGCTaGCGTGGTGCAGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: EGTGRCWLHVQAIFPAGPLCVHC*RGAGPA
Trigger: TGCGGGACCTGCACCACGGCAGCAATGCACACACAG...TGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp TACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATAGTCCCGGCTGGCGCTaGCGCGGCGCAGTGAGCACC +
Preference number: 4 (lower is better)
Translates to: YKCKRRGHGAMLAPRPGDSPGWR*RGAVST
Trigger: GGTGCTCACTGCGCCGCGCCAGCGCCAGCCGGGACT...ATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp TCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCGGCACGGGGCGATGCTaGCTCCACGTCCAGGCGATC +
Preference number: 4 (lower is better)
Translates to: SRRSSLPGHSSGKPGSLLGTGRC*LHVQAI
Trigger: GATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCC...GAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp TCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACCCTGATCGGCACGGGGCGATGCTaGCTCCACGTCCAGGCGATC +
Preference number: 4 (lower is better)
Translates to: SLPGHSSGKPGSLLQTLIGTGRC*LHVQAI
Trigger: GATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCC...GATCAGGGTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp CGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCTATCCGGTAGCTATCTaGGGTCCGGAGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RGHGAMLAPRPGDLPCRAYPVAI*GPEAGE
Trigger: TTCTCCAGCCTCCGGACCTCAGATAGCTACCGGATA...GGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR TCA 90 bp CCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCTGGAGTTAGCAGCGTaGAGAGGGCTCTTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: PRARGDAGSTSRRSSLPGLELAA*RGLLAH
Trigger: ATGAGCCAAGAGCCCTCTTCACGCTGCTAACTCCAG...GCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp TGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGAGCGCTAAGAAGAGCTaGGGGGTGGCCTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: WLHVQAIFPAGPQLRKARSAKKS*GVAWAS
Trigger: GGATGCCCAGGCCACCCCTCAGCTCTTCTTAGCGCT...CCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp TGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGGGTAGGCGTCGCTGGTaGGCACTTGGCTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: WLHVQAIFPAGPQLRKARGRRRW*ALGWRT
Trigger: TGTCCTCCAGCCAAGTGCGCACCAGCGACGCCTACC...CCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp CCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTGGTCTACTGTGGCTGTaGTTGGGGCCTGGCCAACGC +
Preference number: 4 (lower is better)
Translates to: PRPGDLPCRATAQESPAPGLLWL*LGPGQR
Trigger: GCGTTGGCCAGGCCCCAAGCACAGCCACAGTAGACC...AGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp CCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCCATTCTCCTGTCCCTaGACTGCGACAGTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PRARGDAGSTSRRSSLPGPFSCP*TATVGC
Trigger: ACAGCCTACTGTCGCAGTCCAGGGACAGGAGAATGG...GCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp TACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATGCTGGCGCGGCGCAGTaGGCACCAGCTGACGAAGAG +
Preference number: 4 (lower is better)
Translates to: YKCKRRGHGAMLAPRPGDAGAAQ*APADEE
Trigger: CTCTTCGTCAGCTGGTGCTCACTGCGCCGCGCCAGC...ATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp GCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTTGGCCTGGGCATCCCTaGGAAACTCGGTCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: APRPGDLPCRATAQESPAWPGHP*ETRSKG
Trigger: CCCTTTGGACCGAGTTTCTCAGGGATGCCCAGGCCA...AGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp TCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACCCTGATCAGCGCTAAGAAGAGCTaGGGGGTGGCCTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: SLPGHSSGKPGSLLQTLISAKKS*GVAWAS
Trigger: GGATGCCCAGGCCACCCCTCAGCTCTTCTTAGCGCT...GATCAGGGTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp GTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTGGTCTACTGTGGCTGTaGTTGGGGCCTGGCCAACGC +
Preference number: 4 (lower is better)
Translates to: VQAIFPAGPQLRKARLLAGLLWL*LGPGQR
Trigger: GCGTTGGCCAGGCCCCAAGCACAGCCACAGTAGACC...AGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp AGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACCCTCTTCTTGGAGTATaGACGAGTCGAACCGGGCAC +
Preference number: 4 (lower is better)
Translates to: RARGDAGSTSRRSSLPGHPLLGV*TSRTGH
Trigger: GTGCCCGGTTCGACTCGTCCATACTCCAAGAAGAGG...GTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp TGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCAGGGTGGCACTCAGTaGGGACTGGGAGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: CWLHVQAIFPAGPQLRKAQGGTQ*GLGASW
Trigger: CCATGAGGCTCCCAGTCCCCACTGAGTGCCACCCTG...GGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CCA 90 bp ACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGGCGTCCGGGCCAGCATaGGGCTGCGGCCCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: TTSLQMQTPRARGDAGSTASGPA*GCGPGS
Trigger: GGAACCTGGGCCGCAGCCCCATGCTGGCCCGGACGC...CGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CCA 90 bp TGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGTCGCTGGTGCGCACTTaGCTGGAGGACATGGGAGTG +
Preference number: 4 (lower is better)
Translates to: WLHVQAIFPAGPQLRKARSLVRT*LEDMGV
Trigger: CACTCCCATGTCCTCCAGCCAAGTGCGCACCAGCGA...CCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp CCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCTTCGGGAGGGCGGGCTaGCCAGTTCGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: PGDLPCRATAQESPAPCSFGRAG*PVRRRA
Trigger: TGCTCTTCTACGAACTGGCCAGCCCGCCCTCCCGAA...GGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp TCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCAAGGGACGTGGCTCCTaGCGCTACATTCGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SRRSSLPGHSSGKPGSLLKGRGS*RYIREG
Trigger: GCCCTCCCGAATGTAGCGCCAGGAGCCACGTCCCTT...GAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp GACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACACGAGGTGCGCATGCTaGGGGGCGGGCGGCGGGCTT +
Preference number: 4 (lower is better)
Translates to: DHKFTNANAEGTGRCWLHTRCAC*GAGGGL
Trigger: AAGCCCGCCGCCCGCCCCCCAGCATGCGCACCTCGT...GTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525735.1
CDS-3UTR CCA 90 bp ACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCGCGGCCGCAGCTCCTTaGCGAGGGCGGGAAAGGGGG +
Preference number: 4 (lower is better)
Translates to: TSLQMQTPRARGDAGSTSAAAAP*RGRERG
Trigger: CCCCCTTTCCCGCCCTCGCCAAGGAGCTGCGGCCGC...GGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525735.1
CDS-3UTR TCA 90 bp CCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTCTTAGCAATGGGCAGTaGGAGGTCCCAGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PRPGDLPCRATAQESPAPLSNGQ*EVPEGV
Trigger: GACCCCTTCTGGGACCTCTCACTGCCCATTGCTAAG...AGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp ATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCTGGCCTGGGCATCCCTaGGAAACTCGGTCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: MQTPRARGDAGSTSRRSSWPGHP*ETRSKG
Trigger: CCCTTTGGACCGAGTTTCTCAGGGATGCCCAGGCCA...GGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp GAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCAGAGATGCACTGCCCTTaGGACCATAGTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: EGTGRCWLHVQAIFPAGPEMHCP*DHSSPG
Trigger: ACCTGGAGAACTATGGTCGCAAGGGCAGTGCATCTC...TGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR GCA 90 bp CCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCGGAGGGCACCTGAGATaGACTGCCCTTGCGACCATA +
Preference number: 4 (lower is better)
Translates to: PGDLPCRATAQESPAPCSGGHLR*TALATI
Trigger: TATGGTCGCAAGGGCAGTGCATCTCAGGTGCCCTCC...GGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR GCA 90 bp CCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCTCAACTCCCGAGTGTTaGTCAGGCACTGCAGAATTG +
Preference number: 4 (lower is better)
Translates to: PRARGDAGSTSRRSSLPGSTPEC*SGTAEL
Trigger: CAATTCTGCAGTGCCTGAGCAACACTCGGGAGTTGA...GCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp GGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAAGCGAGCTCTTTAGCTaGCCAACAAAGAGATCCCCG +
Preference number: 4 (lower is better)
Translates to: GHGAMLAPRPGDLPCRATSELFS*PTKRSP
Trigger: CGGGGATCTCTTTGTTGGGCAGCTAAAGAGCTCGCT...TGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp GAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACTCCTGTCCCTGGACTaGGACAGTAGGCTGTATAGT +
Preference number: 4 (lower is better)
Translates to: EGTGRCWLHVQAIFPAGPLLSLD*DSRLYS
Trigger: ACTATACAGCCTACTGTCGCAGTCCAGGGACAGGAG...TGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp CCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCGGCCCAGGTTCCTaGGGTCTATCCGGTAGCTAT +
Preference number: 4 (lower is better)
Translates to: PRPGDLPCRATAQESPAPCGPGS*GLSGSY
Trigger: ATAGCTACCGGATAGACCCCAGGAACCTGGGCCGCA...AGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CCA 90 bp CGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCGGCTCACCACATCATTaGGGGATGAAGTCCATATGG +
Preference number: 4 (lower is better)
Translates to: RGHGAMLAPRPGDLPCRAGSPHH*GMKSIW
Trigger: CCATATGGACTTCATCCCCCAATGATGTGGTGAGCC...GGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp CGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCGAGAACCGCTTCAGATaGAGCACCAAGATCTTTGGG +
Preference number: 4 (lower is better)
Translates to: RGHGAMLAPRPGDLPCRAENRFR*STKIFG
Trigger: CCCAAAGATCTTGGTGCTCCATCTGAAGCGGTTCTC...GGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp TCCACGGGGCACAAGCCGGGCCCAGCTGTGTGGGTGAACAGCTTTACTCTCCAGGCAGGTAGGCGTCGCTaGTGCGCACTTGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: STGHKPGPAVWVNSFTLQAGRRR*CALGWR
Trigger: CCTCCAGCCAAGTGCGCACCAGCGACGCCTACCTGC...CTGGAGAGTAAAGCTGTTCACCCACACAGCTGGGCCCGGCTTGTGCCCCGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp GGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAAGACCAGCCAGACCCTaGGCACTCTTAGAATTCTGC +
Preference number: 4 (lower is better)
Translates to: GHGAMLAPRPGDLPCRATRPARP*ALLEFC
Trigger: GCAGAATTCTAAGAGTGCCCAGGGTCTGGCTGGTCT...TGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455332.6
CDS-3UTR TCA 90 bp ACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCGCAGTGAGCACCAGCTaGCGAAGAGGGCTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: TSLQMQTPRARGDAGSTSAVSTS*RRGLPG
Trigger: GCCGGGGAGCCCTCTTCGTCAGCTGGTGCTCACTGC...GGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp CCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTGCTGGCGCGGCGCAGTaGGCACCAGCTGACGAAGAG +
Preference number: 4 (lower is better)
Translates to: PQVYKCKRRGHGAMLAPRAGAAQ*APADEE
Trigger: CTCTTCGTCAGCTGGTGCTCACTGCGCCGCGCCAGC...ACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp CCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCGCAGAATTGAGTTCATaGAGCACGTGTTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: PRARGDAGSTSRRSSLPGAELSS*STCSQG
Trigger: ACCTTGGGAACACGTGCTTCATGAACTCAATTCTGC...GCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp AGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACTCGTCATCAGGAAGATaGTCGAGGTTCTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: RARGDAGSTSRRSSLPGHSSSGR*SRFSGL
Trigger: CAACCCTGAGAACCTCGATCATCTTCCTGATGACGA...GTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp TGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCTTAGCAATGGGCAGTaGGAGGTCCCAGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: CWLHVQAIFPAGPQLRKALSNGQ*EVPEGV
Trigger: GACCCCTTCTGGGACCTCTCACTGCCCATTGCTAAG...GGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp CCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCATGGTGGTTCCGGAGTaGTTGGACACAGCGTACAGG +
Preference number: 4 (lower is better)
Translates to: PGDLPCRATAQESPAPCSMVVPE*LDTAYR
Trigger: CCTGTACGCTGTGTCCAATCACTCCGGAACCACCAT...GGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp GAAGCTCTAGGGACGAGGGGCTTGTGCTATCCTTCAAACAGCTGGGGAGCAGACCGGGCGTCCAGGCGGTaGTGCTCCCAGCGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: EALGTRGLCYPSNSWGADRASRR*CSQRAP
Trigger: TGGAGCTCGCTGGGAGCATCACCGCCTGGACGCCCG...GTCTGCTCCCCAGCTGTTTGAAGGATAGCACAAGCCCCTCGTCCCTAGAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp GCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACGCAACGTCCCAGCTATaGAGAGGCCTGAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: AIFPAGPQLRKARLLAPDATSQL*RGLKES
Trigger: GCTCTCCTTCAGGCCTCTTCATAGCTGGGACGTTGC...GTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp AATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCACGAGGGCTGTGTGTaGATTGCTGCCGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: NANAEGTGRCWLHVQAIFHEGCV*IAAVVQ
Trigger: CTGCACCACGGCAGCAATGCACACACAGCCCTCGTG...GAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp CCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTGCCAACAAAGCGCGGTaGGTATCTCTGGATCTGGGT +
Preference number: 4 (lower is better)
Translates to: PRPGDLPCRATAQESPAPANKAR*VSLDLG
Trigger: ACCCAGATCCAGAGATACGCACCGCGCTTTGTTGGC...AGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp AGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACTTATACACCGTTTTCTaGCTCGGCAGCGACAGCATG +
Preference number: 4 (lower is better)
Translates to: RARGDAGSTSRRSSLPGHLYTVF*LGSDSM
Trigger: CATGCTGTCGCTGCCGAGGCAGAAAACGGTGTATAA...GTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp AGACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCATCAACCTCCCCGGCGTaGGCCGCCAACAGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: RPQVYKCKRRGHGAMLAPSTSPA*AANSPG
Trigger: ACCCGGGCTGTTGGCGGCGCACGCCGGGGAGGTTGA...TGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525735.1
CDS-3UTR CCA 90 bp ATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCGGACTGGGAGCCTCATaGGCTGCCTCTTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: MQTPRARGDAGSTSRRSSGLGAS*AASSWS
Trigger: ACTCCAAGAAGAGGCAGCCCATGAGGCTCCCAGTCC...GGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CCA 90 bp TGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCAAGGGAGAAGGGACGTaGCTCCTGGCGCTACATTCG +
Preference number: 4 (lower is better)
Translates to: CWLHVQAIFPAGPQLRKAKGEGT*LLALHS
Trigger: CGAATGTAGCGCCAGGAGCCACGTCCCTTCTCCCTT...GGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp ACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCGCGGGCGGCGGGCTTTaGCCCTCGCTTAACGTTGGC +
Preference number: 4 (lower is better)
Translates to: TSLQMQTPRARGDAGSTSAGGGL*PSLNVG
Trigger: GCCAACGTTAAGCGAGGGCCAAAGCCCGCCGCCCGC...GGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525735.1
CDS-3UTR CCA 90 bp GACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGGAGCCCCACGAAGGTaGAGAGCAGCAGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: DHKFTNANAEGTGRCWLHGAPRR*RAAGTG
Trigger: CCCCGTCCCTGCTGCTCTCCACCTTCGTGGGGCTCC...GTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525735.1
CDS-3UTR TCA 90 bp ACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTGTCAGGCATCCGCTGCCCCCGCTaGGGCCACTGCCTAAAGGCC +
Preference number: 4 (lower is better)
Translates to: TLALGLRFTGLLWRRVSGIRCPR*GHCLKA
Trigger: GGCCTTTAGGCAGTGGCCTCAGCGGGGGCAGCGGAT...GCCTGACACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR TCA 90 bp TCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCATGGTGGTTCCGGAGTaGTTGGACACAGCGTACAGG +
Preference number: 4 (lower is better)
Translates to: SRRSSLPGHSSGKPGSLLMVVPE*LDTAYR
Trigger: CCTGTACGCTGTGTCCAATCACTCCGGAACCACCAT...GAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp GCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTTTTCCCAGGCGGGTTTaGACAGAGCACTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: APRPGDLPCRATAQESPAFPRRV*TEHWGK
Trigger: TTTTCCCCAGTGCTCTGTTCAAACCCGCCTGGGAAA...AGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp ATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCTGGGCGGGAAGAACTTaGTGCCCTGTCGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: MQTPRARGDAGSTSRRSSWAGRT*CPVGRN
Trigger: ATTCCTTCCGACAGGGCATCAAGTTCTTCCCGCCCA...GGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp GACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACTTGTCTAGGAGGCTCTaGGAAGGGGGCGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: DHKFTNANAEGTGRCWLHLSRRL*EGGGGR
Trigger: CCTGCCCCCGCCCCCTTCTCAGAGCCTCCTAGACAA...GTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp GGACGTGGGCGGGAAGAACTTGATGCCCTGTCGGAAGGAATCTACCTGCTTTCTGAGGGCACGGGGCGATaGTGGCTCCACGTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: GRGREELDALSEGIYLLSEGTGR*WLHVQA
Trigger: CGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTC...AGAAAGCAGGTAGATTCCTTCCGACAGGGCATCAAGTTCTTCCCGCCCACGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp CGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCCGGAAGGAATCTACCTaGTTTCTTCTTTGCCTCACT +
Preference number: 4 (lower is better)
Translates to: RGHGAMLAPRPGDLPCRARKEST*FLLCLT
Trigger: AGTGAGGCAAAGAAGAAAGCAGGTAGATTCCTTCCG...GGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp GAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCAGCAGCGACAGCATGTTaGCTTTTCATCTCCATCAAG +
Preference number: 4 (lower is better)
Translates to: EGTGRCWLHVQAIFPAGPAATAC*LFISIK
Trigger: CTTGATGGAGATGAAAAGCCAACATGCTGTCGCTGC...TGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp GGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGAGCACCAAGATCTTTaGGAACCTCTGGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: GHGAMLAPRPGDLPCRATEHQDL*EPLDGE
Trigger: TTCTCCATCCAGAGGTTCCCAAAGATCTTGGTGCTC...TGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp ATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCCATTCTCCTGTCCCTaGACTGCGACAGTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: MQTPRARGDAGSTSRRSSPFSCP*TATVGC
Trigger: ACAGCCTACTGTCGCAGTCCAGGGACAGGAGAATGG...GGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp CCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTGCAGGTAGGCGTCGCTaGTGCGCACTTGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PQVYKCKRRGHGAMLAPRAGRRR*CALGWR
Trigger: CCTCCAGCCAAGTGCGCACCAGCGACGCCTACCTGC...ACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp AGACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCAGGCACGGGGCGATGCTaGCTCCACGTCCAGGCGATC +
Preference number: 4 (lower is better)
Translates to: RPQVYKCKRRGHGAMLAPGTGRC*LHVQAI
Trigger: GATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCC...TGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp ACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGGCTCTTGGCTCATaGCTCTGGACCGGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: TSLQMQTPRARGDAGSTSRALGS*LWTGEP
Trigger: CGGCTCGCCGGTCCAGAGCCATGAGCCAAGAGCCCT...GGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp TCCACGGGGCACAAGCCGGGCCCAGCTGTGTGGGTGAACAGCTTTACTCTCCAGCTCCTCCTAGGAGCCTaGAATGTGCCAGGCTCCACG +
Preference number: 4 (lower is better)
Translates to: STGHKPGPAVWVNSFTLQLLLGA*NVPGST
Trigger: CGTGGAGCCTGGCACATTCCAGGCTCCTAGGAGGAG...CTGGAGAGTAAAGCTGTTCACCCACACAGCTGGGCCCGGCTTGTGCCCCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp GGACGTGGGCGGGAAGAACTTGATGCCCTGTCGGAAGGAATCTACCTGCTTTCTGCAGTGAGCACCAGCTaGCGAAGAGGGCTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: GRGREELDALSEGIYLLSAVSTS*RRGLPG
Trigger: GCCGGGGAGCCCTCTTCGTCAGCTGGTGCTCACTGC...AGAAAGCAGGTAGATTCCTTCCGACAGGGCATCAAGTTCTTCCCGCCCACGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp GAAGCTCTAGGGACGAGGGGCTTGTGCTATCCTTCAAACAGCTGGGGAGCAGACAGGTACGGGGACGGGTaGGGAAGCTGCTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: EALGTRGLCYPSNSWGADRYGDG*GSCWWG
Trigger: TCCCCACCAGCAGCTTCCTCACCCGTCCCCGTACCT...GTCTGCTCCCCAGCTGTTTGAAGGATAGCACAAGCCCCTCGTCCCTAGAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR TCA 90 bp ATGTCCCTTCGTCTGTCCCCTGGAGTTAGCAGCGTGAAGAGGGCTCTTGGCTCAGCCTGGGAGGGCACCTaGGATGCACTGCCCTTGCGA +
Preference number: 4 (lower is better)
Translates to: MSLRLSPGVSSVKRALGSAWEGT*DALPLR
Trigger: TCGCAAGGGCAGTGCATCTCAGGTGCCCTCCCAGGC...TGAGCCAAGAGCCCTCTTCACGCTGCTAACTCCAGGGGACAGACGAAGGGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR TCA 90 bp TCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACCCTGATCGCACATCCTCTTTGGTaGAGAGCCTCATGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: SLPGHSSGKPGSLLQTLIAHPLW*RASCSP
Trigger: TGGACTGCATGAGGCTCTTCACCAAAGAGGATGTGC...GATCAGGGTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp GTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTTTTCCCAGGCGGGTTTaGACAGAGCACTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: VQAIFPAGPQLRKARLLAFPRRV*TEHWGK
Trigger: TTTTCCCCAGTGCTCTGTTCAAACCCGCCTGGGAAA...AGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp TGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCAGCGAGCTCTTTAGCTaGCCAACAAAGAGATCCCCG +
Preference number: 4 (lower is better)
Translates to: CWLHVQAIFPAGPQLRKASELFS*PTKRSP
Trigger: CGGGGATCTCTTTGTTGGGCAGCTAAAGAGCTCGCT...GGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp TTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGGGCTGCATCCACTCCTaGTCGGCAGCTTCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: FTNANAEGTGRCWLHVQAGCIHS*SAASGL
Trigger: CAAACCTGAAGCTGCCGAGCAGGAGTGGATGCAGCC...CGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp ATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCACCATAGCCCGACTTaGCATAGTGGGCATCTGTGT +
Preference number: 4 (lower is better)
Translates to: MQTPRARGDAGSTSRRSSHHSPT*HSGHLC
Trigger: ACACAGATGCCCACTATGCCAAGTCGGGCTATGGTG...GGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CCA 90 bp ATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCGCGGTGCGTATCTCTaGATCTGGGTCTTGAACTCA +
Preference number: 4 (lower is better)
Translates to: MQTPRARGDAGSTSRRSSRGAYL*IWVLNS
Trigger: TGAGTTCAAGACCCAGATCCAGAGATACGCACCGCG...GGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp CCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCGAGAACCGCTTCAGATaGAGCACCAAGATCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PGDLPCRATAQESPAPCSENRFR*STKIFG
Trigger: CCCAAAGATCTTGGTGCTCCATCTGAAGCGGTTCTC...GGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp GCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACTATAGTGGCCACCCATaGTGGTTCCGGAGTGATTGG +
Preference number: 4 (lower is better)
Translates to: AIFPAGPQLRKARLLAPDYSGHP*WFRSDW
Trigger: CCAATCACTCCGGAACCACCATGGGTGGCCACTATA...GTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp ACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTGTCAGGCGCAGGTAGGCGTCGCTaGTGCGCACTTGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TLALGLRFTGLLWRRVSGAGRRR*CALGWR
Trigger: CCTCCAGCCAAGTGCGCACCAGCGACGCCTACCTGC...GCCTGACACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp ACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGAAGGGACGTGGCTCCTaGCGCTACATTCGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TTSLQMQTPRARGDAGSTKGRGS*RYIREG
Trigger: GCCCTCCCGAATGTAGCGCCAGGAGCCACGTCCCTT...CGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp CACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCTACTGTGGCTGTGCTTaGGGCCTGGCCAACGCCCAC +
Preference number: 4 (lower is better)
Translates to: HKFTNANAEGTGRCWLHVYCGCA*GLANAH
Trigger: GTGGGCGTTGGCCAGGCCCCAAGCACAGCCACAGTA...GACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp GCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACGTGTACACTTGCCCTTaGGCTCAGGTTCACAGGTCT +
Preference number: 4 (lower is better)
Translates to: AIFPAGPQLRKARLLAPDVYTCP*AQVHRS
Trigger: AGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACAC...GTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp GTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTGTGTACACTTGCCCTTaGGCTCAGGTTCACAGGTCT +
Preference number: 4 (lower is better)
Translates to: VQAIFPAGPQLRKARLLAVYTCP*AQVHRS
Trigger: AGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACAC...AGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp GCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTAGTTCACAAATGTTGTaGGCTTGCTGGTTCGGATCC +
Preference number: 4 (lower is better)
Translates to: APRPGDLPCRATAQESPASSQML*ACWFGS
Trigger: GGATCCGAACCAGCAAGCTCACAACATTTGTGAACT...AGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp TACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATATGGTGGTTCCGGAGTaGTTGGACACAGCGTACAGG +
Preference number: 4 (lower is better)
Translates to: YKCKRRGHGAMLAPRPGDMVVPE*LDTAYR
Trigger: CCTGTACGCTGTGTCCAATCACTCCGGAACCACCAT...ATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp TTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGGGGAGCCTCATGGGCTaGCTCTTCTTGGAGTATGGA +
Preference number: 4 (lower is better)
Translates to: FTNANAEGTGRCWLHVQAGSLMG*LFLEYG
Trigger: TCCATACTCCAAGAAGAGGCAGCCCATGAGGCTCCC...CGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR GCA 90 bp TGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCTTATACACCGTTTTCTaGCTCGGCAGCGACAGCATG +
Preference number: 4 (lower is better)
Translates to: CWLHVQAIFPAGPQLRKALYTVF*LGSDSM
Trigger: CATGCTGTCGCTGCCGAGGCAGAAAACGGTGTATAA...GGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp GCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACGAGTCGTTGAAAGTGTaGCATTCTCCTGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: AIFPAGPQLRKARLLAPDESLKV*HSPVPG
Trigger: TCCAGGGACAGGAGAATGGCACACTTTCAACGACTC...GTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp TCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCGAGTCGTTGAAAGTGTaGCATTCTCCTGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SRRSSLPGHSSGKPGSLLESLKV*HSPVPG
Trigger: TCCAGGGACAGGAGAATGGCACACTTTCAACGACTC...GAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp GTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTTCTTCTTTGCCTCACTaGAATGCACAACGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VQAIFPAGPQLRKARLLASSLPH*NAQRAR
Trigger: CCTGGCTCGTTGTGCATTGCAGTGAGGCAAAGAAGA...AGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp CACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCTCAGTACCCCGGGTCTaGCTCTCTGCCCGCTTACCA +
Preference number: 4 (lower is better)
Translates to: HKFTNANAEGTGRCWLHVSVPRV*LSARLP
Trigger: TGGTAAGCGGGCAGAGAGCCAGACCCGGGGTACTGA...GACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CCA 90 bp GCAGTTACCCCCTGGTCCCCAAATGCTATAAGGCACAATTCTTGGAGGCAACTACTCTTCCCGGGGAGCTaGAGCGGCTGGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: AVTPWSPNAIRHNSWRQLLFPGS*SGWAQG
Trigger: CCCCTGGGCCCAGCCGCTCCAGCTCCCCGGGAAGAG...TAGTTGCCTCCAAGAATTGTGCCTTATAGCATTTGGGGACCAGGGGGTAACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CCA 90 bp TCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACCCTGATCGGTCTTGAACTCAGATaGGCTCACCACATCATTGGG +
Preference number: 4 (lower is better)
Translates to: SLPGHSSGKPGSLLQTLIGLELR*AHHIIG
Trigger: CCCAATGATGTGGTGAGCCCATCTGAGTTCAAGACC...GATCAGGGTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp TGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGTTCACCTCGTTATaGAGCCCATCCAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: CWLHVQAIFPAGPQLRKARFTSL*SPSRRK
Trigger: CTTTCTTCTGGATGGGCTCCATAACGAGGTGAACCG...GGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp CCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCGAGCACCAAGATCTTTaGGAACCTCTGGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: PGDLPCRATAQESPAPCSEHQDL*EPLDGE
Trigger: TTCTCCATCCAGAGGTTCCCAAAGATCTTGGTGCTC...GGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp TCCACGGGGCACAAGCCGGGCCCAGCTGTGTGGGTGAACAGCTTTACTCTCCAGAGTGGCCACCCATGGTaGTTCCGGAGTGATTGGACA +
Preference number: 4 (lower is better)
Translates to: STGHKPGPAVWVNSFTLQSGHPW*FRSDWT
Trigger: TGTCCAATCACTCCGGAACCACCATGGGTGGCCACT...CTGGAGAGTAAAGCTGTTCACCCACACAGCTGGGCCCGGCTTGTGCCCCGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp TTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGAGTGGCCACCCATGGTaGTTCCGGAGTGATTGGACA +
Preference number: 4 (lower is better)
Translates to: FTNANAEGTGRCWLHVQASGHPW*FRSDWT
Trigger: TGTCCAATCACTCCGGAACCACCATGGGTGGCCACT...CGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp TTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGCCATTCTCCTGTCCCTaGACTGCGACAGTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: FTNANAEGTGRCWLHVQAPFSCP*TATVGC
Trigger: ACAGCCTACTGTCGCAGTCCAGGGACAGGAGAATGG...CGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp GCAGTTACCCCCTGGTCCCCAAATGCTATAAGGCACAATTCTTGGAGGCAACTAGGCGAGCCGTGCGGGTaGAGATGGGCGCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: AVTPWSPNAIRHNSWRQLGEPCG*RWAPAP
Trigger: AGGAGCCGGCGCCCATCTCCACCCGCACGGCTCGCC...TAGTTGCCTCCAAGAATTGTGCCTTATAGCATTTGGGGACCAGGGGGTAACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp CCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCGTGAAGAGGGCTCTTaGCTCATGGCTCTGGACCGG +
Preference number: 4 (lower is better)
Translates to: PQVYKCKRRGHGAMLAPRREEGS*LMALDR
Trigger: CCGGTCCAGAGCCATGAGCCAAGAGCCCTCTTCACG...ACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp ATGTCCCTTCGTCTGTCCCCTGGAGTTAGCAGCGTGAAGAGGGCTCTTGGCTCATACTGTGGCTGTGCTTaGGGCCTGGCCAACGCCCAC +
Preference number: 4 (lower is better)
Translates to: MSLRLSPGVSSVKRALGSYCGCA*GLANAH
Trigger: GTGGGCGTTGGCCAGGCCCCAAGCACAGCCACAGTA...TGAGCCAAGAGCCCTCTTCACGCTGCTAACTCCAGGGGACAGACGAAGGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp GGACGTGGGCGGGAAGAACTTGATGCCCTGTCGGAAGGAATCTACCTGCTTTCTGCTTACCACCCCCAGTaGTGTCGGGTCTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRGREELDALSEGIYLLSAYHPQ*CRVSAG
Trigger: CCCTGCTGAGACCCGACATCACTGGGGGTGGTAAGC...AGAAAGCAGGTAGATTCCTTCCGACAGGGCATCAAGTTCTTCCCGCCCACGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR TCA 90 bp GAAGCTCTAGGGACGAGGGGCTTGTGCTATCCTTCAAACAGCTGGGGAGCAGACATCCCGGGCCAGGTCTaGTTGGCTGTCCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: EALGTRGLCYPSNSWGADIPGQV*LAVQLL
Trigger: CAGAAGCTGGACAGCCAATCAGACCTGGCCCGGGAT...GTCTGCTCCCCAGCTGTTTGAAGGATAGCACAAGCCCCTCGTCCCTAGAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR TCA 90 bp TGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCGCAGAATTGAGTTCATaGAGCACGTGTTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: CWLHVQAIFPAGPQLRKAAELSS*STCSQG
Trigger: ACCTTGGGAACACGTGCTTCATGAACTCAATTCTGC...GGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp TGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCACATCATTGGGGGATaGAGTCCATATGGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: WLHVQAIFPAGPQLRKARHIIGG*SPYGLN
Trigger: ATTCAGACCATATGGACTTCATCCCCCAATGATGTG...CCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp CCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACCCTGATCAGGCTGCATCCTCTGGATCTGGGTCTTaGACTCAGATGGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: PQLRKARLLAPDPDQAASSGSGS*TQMGSP
Trigger: TGGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGA...GGATGCAGCCTGATCAGGGTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp AATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCTCGTCATCAGGAAGATaGTCGAGGTTCTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: NANAEGTGRCWLHVQAIFSSSGR*SRFSGL
Trigger: CAACCCTGAGAACCTCGATCATCTTCCTGATGACGA...GAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp CGAGCCAGGGCTAAGGGCAGGATCCCTTTCCCAGGCGGGTTTGAACAGAGCACTCTGGAGTTAGCAGCGTaGAGAGGGCTCTTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: RARAKGRIPFPGGFEQSTLELAA*RGLLAH
Trigger: ATGAGCCAAGAGCCCTCTTCACGCTGCTAACTCCAG...AGTGCTCTGTTCAAACCCGCCTGGGAAAGGGATCCTGCCCTTAGCCCTGGCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp TCCACGGGGCACAAGCCGGGCCCAGCTGTGTGGGTGAACAGCTTTACTCTCCAGGAAAAGGGAAGAGGCTaGGGGATATTTCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: STGHKPGPAVWVNSFTLQEKGRG*GIFQEG
Trigger: CCCCTCCTGAAATATCCCTCAGCCTCTTCCCTTTTC...CTGGAGAGTAAAGCTGTTCACCCACACAGCTGGGCCCGGCTTGTGCCCCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp CCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTATGTAGGGCAAAATTaGGCCCACAGGAAAGAACCA +
Preference number: 4 (lower is better)
Translates to: PRPGDLPCRATAQESPAPYVGQN*AHRKEP
Trigger: TGGTTCTTTCCTGTGGGCTCAATTTTGCCCTACATA...AGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp CCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTGCCCAGCTGTGTGGGTaGACAGCTTTACTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PQVYKCKRRGHGAMLAPRAQLCG*TALLSR
Trigger: CCTGGAGAGTAAAGCTGTTCACCCACACAGCTGGGC...ACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp CGAGCCAGGGCTAAGGGCAGGATCCCTTTCCCAGGCGGGTTTGAACAGAGCACTGCCAACAAAGCGCGGTaGGTATCTCTGGATCTGGGT +
Preference number: 4 (lower is better)
Translates to: RARAKGRIPFPGGFEQSTANKAR*VSLDLG
Trigger: ACCCAGATCCAGAGATACGCACCGCGCTTTGTTGGC...AGTGCTCTGTTCAAACCCGCCTGGGAAAGGGATCCTGCCCTTAGCCCTGGCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp TACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTCCTGTCCCTGGACTaGGACAGTAGGCTGTATAGT +
Preference number: 4 (lower is better)
Translates to: YKCKRRGHGAMLAPRPGDLLSLD*DSRLYS
Trigger: ACTATACAGCCTACTGTCGCAGTCCAGGGACAGGAG...ATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp CACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCGGCTGCATCCACTCCTaGTCGGCAGCTTCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: HKFTNANAEGTGRCWLHVGCIHS*SAASGL
Trigger: CAAACCTGAAGCTGCCGAGCAGGAGTGGATGCAGCC...GACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp GCAGTTACCCCCTGGTCCCCAAATGCTATAAGGCACAATTCTTGGAGGCAACTAGAGGGCACGGGGCGATaGTGGCTCCACGTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: AVTPWSPNAIRHNSWRQLEGTGR*WLHVQA
Trigger: CGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTC...TAGTTGCCTCCAAGAATTGTGCCTTATAGCATTTGGGGACCAGGGGGTAACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp GACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGGTATTCAGGGCAGCTaGCTGTCTGGTAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: DHKFTNANAEGTGRCWLHGIQGS*LSGRAP
Trigger: AGGGGCTCTACCAGACAGCCAGCTGCCCTGAATACC...GTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CCA 90 bp AATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCAATGGGTCGGTAGGTTaGGCTGATGATTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: NANAEGTGRCWLHVQAIFNGSVG*ADDFRD
Trigger: GTCCCTGAAATCATCAGCCCAACCTACCGACCCATT...GAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CCA 90 bp TTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGCGCGGTGCGTATCTCTaGATCTGGGTCTTGAACTCA +
Preference number: 4 (lower is better)
Translates to: FTNANAEGTGRCWLHVQARGAYL*IWVLNS
Trigger: TGAGTTCAAGACCCAGATCCAGAGATACGCACCGCG...CGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp ATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCGCAGCGACAGCATGTTaGCTTTTCATCTCCATCAAG +
Preference number: 4 (lower is better)
Translates to: MQTPRARGDAGSTSRRSSAATAC*LFISIK
Trigger: CTTGATGGAGATGAAAAGCCAACATGCTGTCGCTGC...GGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp CGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCATCTTTGGGAACCTCTaGATGGAGAACTTCTTTATA +
Preference number: 4 (lower is better)
Translates to: RGHGAMLAPRPGDLPCRAIFGNL*MENFFI
Trigger: TATAAAGAAGTTCTCCATCCAGAGGTTCCCAAAGAT...GGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp AATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCTGGTTCCGGAGTGATTaGACACAGCGTACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: NANAEGTGRCWLHVQAIFWFRSD*TQRTGC
Trigger: ACAACCTGTACGCTGTGTCCAATCACTCCGGAACCA...GAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp GAAGCTCTAGGGACGAGGGGCTTGTGCTATCCTTCAAACAGCTGGGGAGCAGACTTCGGGAGGGCGGGCTaGCCAGTTCGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: EALGTRGLCYPSNSWGADFGRAG*PVRRRA
Trigger: TGCTCTTCTACGAACTGGCCAGCCCGCCCTCCCGAA...GTCTGCTCCCCAGCTGTTTGAAGGATAGCACAAGCCCCTCGTCCCTAGAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp CACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCAAGGGAGAAGGGACGTaGCTCCTGGCGCTACATTCG +
Preference number: 4 (lower is better)
Translates to: HKFTNANAEGTGRCWLHVKGEGT*LLALHS
Trigger: CGAATGTAGCGCCAGGAGCCACGTCCCTTCTCCCTT...GACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp CCCACAGGAAAGAACCATACAACTGAGGCAAGATGTCCCCAAATACCCAGGCTCGGAGCAGACCAGGGGTaGGCTAGAGGACGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: PTGKNHTTEARCPQIPRLGADQG*ARGRGR
Trigger: CCGCCCACGTCCTCTAGCCCACCCCTGGTCTGCTCC...GAGCCTGGGTATTTGGGGACATCTTGCCTCAGTTGTATGGTTCTTTCCTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp CCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCGGGCCCAGCTGTGTaGGTGAACAGCTTTACTCTC +
Preference number: 4 (lower is better)
Translates to: PQVYKCKRRGHGAMLAPRPGPAV*VNSFTL
Trigger: GAGAGTAAAGCTGTTCACCCACACAGCTGGGCCCGG...ACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp CCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTTGGGCGGGAAGAACTTaGTGCCCTGTCGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: PQVYKCKRRGHGAMLAPRWAGRT*CPVGRN
Trigger: ATTCCTTCCGACAGGGCATCAAGTTCTTCCCGCCCA...ACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp GTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTTATGTAGGGCAAAATTaGGCCCACAGGAAAGAACCA +
Preference number: 4 (lower is better)
Translates to: VQAIFPAGPQLRKARLLAYVGQN*AHRKEP
Trigger: TGGTTCTTTCCTGTGGGCTCAATTTTGCCCTACATA...AGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp ATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCGTGTTGCTCAGGCACTaGAGAATTGAGTTCATGAAG +
Preference number: 4 (lower is better)
Translates to: MQTPRARGDAGSTSRRSSVLLRH*RIEFMK
Trigger: CTTCATGAACTCAATTCTGCAGTGCCTGAGCAACAC...GGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp GGACGTGGGCGGGAAGAACTTGATGCCCTGTCGGAAGGAATCTACCTGCTTTCTCTGTGTGTGCATTGCTaGCGTGGTGCAGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: GRGREELDALSEGIYLLSLCVHC*RGAGPA
Trigger: TGCGGGACCTGCACCACGGCAGCAATGCACACACAG...AGAAAGCAGGTAGATTCCTTCCGACAGGGCATCAAGTTCTTCCCGCCCACGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp CACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCGCCAACAAAGCGCGGTaGGTATCTCTGGATCTGGGT +
Preference number: 4 (lower is better)
Translates to: HKFTNANAEGTGRCWLHVANKAR*VSLDLG
Trigger: ACCCAGATCCAGAGATACGCACCGCGCTTTGTTGGC...GACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp CAGACCAGGGGTGGGCTAGAGGACGTGGGCGGGAAGAACTTGATGCCCTGTCGGCCCCTGGTCCCCAAATaGTATAAGGCACAATTCTTG +
Preference number: 4 (lower is better)
Translates to: QTRGGLEDVGGKNLMPCRPLVPK*YKAQFL
Trigger: CAAGAATTGTGCCTTATAGCATTTGGGGACCAGGGG...CCGACAGGGCATCAAGTTCTTCCCGCCCACGTCCTCTAGCCCACCCCTGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp ACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCGGGACGAGGGGCTTGTaGTATCCTTCAAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: TSLQMQTPRARGDAGSTSGTRGL*YPSNSW
Trigger: CCAGCTGTTTGAAGGATAGCACAAGCCCCTCGTCCC...GGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp GACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACCCTCTTCTTGGAGTATaGACGAGTCGAACCGGGCAC +
Preference number: 4 (lower is better)
Translates to: DHKFTNANAEGTGRCWLHPLLGV*TSRTGH
Trigger: GTGCCCGGTTCGACTCGTCCATACTCCAAGAAGAGG...GTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp TCCACGGGGCACAAGCCGGGCCCAGCTGTGTGGGTGAACAGCTTTACTCTCCAGAGACCAGCCAGACCCTaGGCACTCTTAGAATTCATG +
Preference number: 4 (lower is better)
Translates to: STGHKPGPAVWVNSFTLQRPARP*ALLEFM
Trigger: CATGAATTCTAAGAGTGCCCAGGGTCTGGCTGGTCT...CTGGAGAGTAAAGCTGTTCACCCACACAGCTGGGCCCGGCTTGTGCCCCGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CCA 90 bp GGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGGGATGAAGTCCATATaGTCTGAATTAGTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: GHGAMLAPRPGDLPCRATGMKSI*SELVLQ
Trigger: TTGCAAAACTAATTCAGACCATATGGACTTCATCCC...TGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp CCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACCCTGATCAGGCTGCATCCGGCTCACCACATCATTaGGGGATGAAGTCCATATGG +
Preference number: 4 (lower is better)
Translates to: PQLRKARLLAPDPDQAASGSPHH*GMKSIW
Trigger: CCATATGGACTTCATCCCCCAATGATGTGGTGAGCC...GGATGCAGCCTGATCAGGGTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp TCCACGGGGCACAAGCCGGGCCCAGCTGTGTGGGTGAACAGCTTTACTCTCCAGCGGTTCACCTCGTTATaGAGCCCATCCAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: STGHKPGPAVWVNSFTLQRFTSL*SPSRRK
Trigger: CTTTCTTCTGGATGGGCTCCATAACGAGGTGAACCG...CTGGAGAGTAAAGCTGTTCACCCACACAGCTGGGCCCGGCTTGTGCCCCGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp TTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGCGGTTCACCTCGTTATaGAGCCCATCCAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: FTNANAEGTGRCWLHVQARFTSL*SPSRRK
Trigger: CTTTCTTCTGGATGGGCTCCATAACGAGGTGAACCG...CGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp GAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCATGTAAACAGCATGGTTaGTGTTTTCTGAGGCAAATT +
Preference number: 4 (lower is better)
Translates to: EGTGRCWLHVQAIFPAGPCKQHG*CFLRQI
Trigger: AATTTGCCTCAGAAAACACCAACCATGCTGTTTACA...TGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp TACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATTGGTTCCGGAGTGATTaGACACAGCGTACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: YKCKRRGHGAMLAPRPGDWFRSD*TQRTGC
Trigger: ACAACCTGTACGCTGTGTCCAATCACTCCGGAACCA...ATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp ACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTGTCAGGCCTCCCAGGGCAGGACTaGAGACCAGCGCTAAGAAGA +
Preference number: 4 (lower is better)
Translates to: TLALGLRFTGLLWRRVSGLPGQD*RPALRR
Trigger: TCTTCTTAGCGCTGGTCTCCAGTCCTGCCCTGGGAG...GCCTGACACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp GGACGTGGGCGGGAAGAACTTGATGCCCTGTCGGAAGGAATCTACCTGCTTTCTCTCCTCCTAGGAGCCTaGAATGTGCCAGGCTCCACG +
Preference number: 4 (lower is better)
Translates to: GRGREELDALSEGIYLLSLLLGA*NVPGST
Trigger: CGTGGAGCCTGGCACATTCCAGGCTCCTAGGAGGAG...AGAAAGCAGGTAGATTCCTTCCGACAGGGCATCAAGTTCTTCCCGCCCACGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp TCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCAATTCTGCCTCTTCTTaGAGTATGGACGAGTCGAAC +
Preference number: 4 (lower is better)
Translates to: SRRSSLPGHSSGKPGSLLNSASS*SMDESN
Trigger: GTTCGACTCGTCCATACTCCAAGAAGAGGCAGAATT...GAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455332.6
CDS-3UTR CCA 90 bp TACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATAGACCAGCCAGACCCTaGGCACTCTTAGAATTCTTG +
Preference number: 4 (lower is better)
Translates to: YKCKRRGHGAMLAPRPGDRPARP*ALLEFL
Trigger: CAAGAATTCTAAGAGTGCCCAGGGTCTGGCTGGTCT...ATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525735.1
CDS-3UTR TCA 90 bp TTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGAGTTCACAAATGTTGTaGGCTTGCTGGTTCGGATCC +
Preference number: 4 (lower is better)
Translates to: FTNANAEGTGRCWLHVQASSQML*ACWFGS
Trigger: GGATCCGAACCAGCAAGCTCACAACATTTGTGAACT...CGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp GTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTAGACACAGTTGTTTCTaGCACATAGGAAGACCACAA +
Preference number: 4 (lower is better)
Translates to: VQAIFPAGPQLRKARLLARHSCF*HIGRPQ
Trigger: TTGTGGTCTTCCTATGTGTCAGAAACAACTGTGTCT...AGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp GTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTGTCGCAACGTCCCAGCTATaGAGAGGCCTGAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: VYTCPWAQVHRSSLEKGVATSQL*RGLKES
Trigger: GCTCTCCTTCAGGCCTCTTCATAGCTGGGACGTTGC...GACACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp ACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCGAAAAGGGAAGAGGCTaGGGGATATTTCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TSLQMQTPRARGDAGSTSEKGRG*GIFQEG
Trigger: CCCCTCCTGAAATATCCCTCAGCCTCTTCCCTTTTC...GGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp ATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCAAAGAACCATACAACTaGGGCAAGATGTCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: MQTPRARGDAGSTSRRSSKEPYN*GKMSPN
Trigger: ATTTGGGGACATCTTGCCTCAGTTGTATGGTTCTTT...GGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp GACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACAATTCTTGGCTTTGTTaGGCAGGAGCCCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: DHKFTNANAEGTGRCWLHNSWLC*AGAPRR
Trigger: CCTTCGTGGGGCTCCTGCTCAACAAAGCCAAGAATT...GTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525735.1
CDS-3UTR GCA 90 bp TGCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTGGGTGCAGAGCTCCTTaGGCGTCCGGGCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: CLHSKQVYTCPWAQVHRSGCRAP*ASGPAW
Trigger: CCATGCTGGCCCGGACGCGCAAGGAGCTCTGCACCC...AGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CCA 90 bp CCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTTGGGCTGCCTCTTCTTaGAGTATGGACGAGTCGAAC +
Preference number: 4 (lower is better)
Translates to: PQVYKCKRRGHGAMLAPRWAASS*SMDESN
Trigger: GTTCGACTCGTCCATACTCCAAGAAGAGGCAGCCCA...ACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CCA 90 bp ACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTATAGTGGCCACCCATaGTGGTTCCGGAGTGATTGG +
Preference number: 4 (lower is better)
Translates to: TTSLQMQTPRARGDAGSTYSGHP*WFRSDW
Trigger: CCAATCACTCCGGAACCACCATGGGTGGCCACTATA...CGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp CCCACAGGAAAGAACCATACAACTGAGGCAAGATGTCCCCAAATACCCAGGCTCAAGGGACGTGGCTCCTaGCGCTACATTCGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PTGKNHTTEARCPQIPRLKGRGS*RYIREG
Trigger: GCCCTCCCGAATGTAGCGCCAGGAGCCACGTCCCTT...GAGCCTGGGTATTTGGGGACATCTTGCCTCAGTTGTATGGTTCTTTCCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp GCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTTGGCTCATGGCTCTaGACCGGCGAGCCGTGCGGG +
Preference number: 4 (lower is better)
Translates to: AYTVNKCTLALGLRFTGLLGSWL*TGEPCG
Trigger: CCCGCACGGCTCGCCGGTCCAGAGCCATGAGCCAAG...AAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR CAA 72 bp ACCAGGGGTGGGCTAGAGGACGTGGGCGGGAAGAACTaGATGCCCTGTCGGAAGGAATCTACCTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TRGGLEDVGGKN*MPCRKESTCFL
Trigger: AAGAAAGCAGGTAGATTCCTTCCGACAGGGCATCAAGTTCTTCCCGCCCACGTCCTCTAGCCCACCCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp ACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTGTCAGGCGCACATCCTCTTTGGTaGAGAGCCTCATGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: TLALGLRFTGLLWRRVSGAHPLW*RASCSP
Trigger: TGGACTGCATGAGGCTCTTCACCAAAGAGGATGTGC...GCCTGACACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp AGACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCAGCACATCCTCTTTGGTaGAGAGCCTCATGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: RPQVYKCKRRGHGAMLAPAHPLW*RASCSP
Trigger: TGGACTGCATGAGGCTCTTCACCAAAGAGGATGTGC...TGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp TGCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTTGTCTAGGAGGCTCTaGGAAGGGGGCGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CLHSKQVYTCPWAQVHRSLSRRL*EGGGGR
Trigger: CCTGCCCCCGCCCCCTTCTCAGAGCCTCCTAGACAA...AGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp ACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCTCAACTCCCGAGTGTTaGTCAGGCACTGCAGAATTG +
Preference number: 4 (lower is better)
Translates to: TSLQMQTPRARGDAGSTSSTPEC*SGTAEL
Trigger: CAATTCTGCAGTGCCTGAGCAACACTCGGGAGTTGA...GGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR GCA 90 bp GACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACTCTTCTTTGCCTCACTaGAATGCACAACGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: DHKFTNANAEGTGRCWLHSSLPH*NAQRAR
Trigger: CCTGGCTCGTTGTGCATTGCAGTGAGGCAAAGAAGA...GTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp TCCCTGAGAAACTCGGTCCAAAGGGCCTATTGTCTAGGAGGCTCTGAGAAGGGGGGGACGAGGGGCTTGTaGTATCCTTCAAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLRNSVQRAYCLGGSEKGGTRGL*YPSNSW
Trigger: CCAGCTGTTTGAAGGATAGCACAAGCCCCTCGTCCC...CCCCTTCTCAGAGCCTCCTAGACAATAGGCCCTTTGGACCGAGTTTCTCAGGGA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp CCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTGGGATGAAGTCCATATaGTCTGAATTAGTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: PRPGDLPCRATAQESPAPGMKSI*SELVLQ
Trigger: TTGCAAAACTAATTCAGACCATATGGACTTCATCCC...AGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp CCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCGGGATGAAGTCCATATaGTCTGAATTAGTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: PGDLPCRATAQESPAPCSGMKSI*SELVLQ
Trigger: TTGCAAAACTAATTCAGACCATATGGACTTCATCCC...GGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp CCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTGCGTATCTCTGGATCTaGGTCTTGAACTCAGATGGG +
Preference number: 4 (lower is better)
Translates to: PQVYKCKRRGHGAMLAPRAYLWI*VLNSDG
Trigger: CCCATCTGAGTTCAAGACCCAGATCCAGAGATACGC...ACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp ATGTCCCTTCGTCTGTCCCCTGGAGTTAGCAGCGTGAAGAGGGCTCTTGGCTCACGCGGTGCGTATCTCTaGATCTGGGTCTTGAACTCA +
Preference number: 4 (lower is better)
Translates to: MSLRLSPGVSSVKRALGSRGAYL*IWVLNS
Trigger: TGAGTTCAAGACCCAGATCCAGAGATACGCACCGCG...TGAGCCAAGAGCCCTCTTCACGCTGCTAACTCCAGGGGACAGACGAAGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp GTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTGTCAGTGGCCACCCATGGTaGTTCCGGAGTGATTGGACA +
Preference number: 4 (lower is better)
Translates to: VYTCPWAQVHRSSLEKGVSGHPW*FRSDWT
Trigger: TGTCCAATCACTCCGGAACCACCATGGGTGGCCACT...GACACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp TCCCTGAGAAACTCGGTCCAAAGGGCCTATTGTCTAGGAGGCTCTGAGAAGGGGTGGTGGGGACCGGCTTaGAACCAAGTTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SLRNSVQRAYCLGGSEKGWWGPA*NQVSPS
Trigger: AGAAGGAGAAACTTGGTTTCAAGCCGGTCCCCACCA...CCCCTTCTCAGAGCCTCCTAGACAATAGGCCCTTTGGACCGAGTTTCTCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR TCA 90 bp ACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCGCAGAATTGAGTTCATaGAGCACGTGTTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: TSLQMQTPRARGDAGSTSAELSS*STCSQG
Trigger: ACCTTGGGAACACGTGCTTCATGAACTCAATTCTGC...GGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp ATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCGAAGTCCATATGGTCTaGATTAGTTTTGCAAACTCT +
Preference number: 4 (lower is better)
Translates to: MQTPRARGDAGSTSRRSSEVHMV*ISFANS
Trigger: AGAGTTTGCAAAACTAATTCAGACCATATGGACTTC...GGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp TGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCGAAGTCCATATGGTCTaGATTAGTTTTGCAAACTCT +
Preference number: 4 (lower is better)
Translates to: CWLHVQAIFPAGPQLRKAEVHMV*ISFANS
Trigger: AGAGTTTGCAAAACTAATTCAGACCATATGGACTTC...GGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp TCCCTGAGAAACTCGGTCCAAAGGGCCTATTGTCTAGGAGGCTCTGAGAAGGGGTCTGGATCTGGGTCTTaGACTCAGATGGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: SLRNSVQRAYCLGGSEKGSGSGS*TQMGSP
Trigger: TGGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGA...CCCCTTCTCAGAGCCTCCTAGACAATAGGCCCTTTGGACCGAGTTTCTCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp GTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTGTCTCTGGATCTGGGTCTTaGACTCAGATGGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: VYTCPWAQVHRSSLEKGVSGSGS*TQMGSP
Trigger: TGGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGA...GACACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp AGACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCATCGTCATCAGGAAGATaGTCGAGGTTCTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: RPQVYKCKRRGHGAMLAPSSSGR*SRFSGL
Trigger: CAACCCTGAGAACCTCGATCATCTTCCTGATGACGA...TGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp CCCACAGGAAAGAACCATACAACTGAGGCAAGATGTCCCCAAATACCCAGGCTCTGTAGCGCTTCAGGGTaGAGGAGAGCTGGGACATCC +
Preference number: 4 (lower is better)
Translates to: PTGKNHTTEARCPQIPRLCSASG*RRAGTS
Trigger: GGATGTCCCAGCTCTCCTCCACCCTGAAGCGCTACA...GAGCCTGGGTATTTGGGGACATCTTGCCTCAGTTGTATGGTTCTTTCCTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CCA 90 bp GCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTGAGGTCCGGAGGCTaGAGAAATCCCGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: AYTVNKCTLALGLRFTGLLRSGG*RNPGPG
Trigger: ACCTGGCCCGGGATTTCTCCAGCCTCCGGACCTCAG...AAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CCA 90 bp ACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTGTCAGGCGGTCTTGAACTCAGATaGGCTCACCACATCATTGGG +
Preference number: 4 (lower is better)
Translates to: TLALGLRFTGLLWRRVSGGLELR*AHHIIG
Trigger: CCCAATGATGTGGTGAGCCCATCTGAGTTCAAGACC...GCCTGACACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp ACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTGTCAGGCGCGTATCTCTGGATCTaGGTCTTGAACTCAGATGGG +
Preference number: 4 (lower is better)
Translates to: TLALGLRFTGLLWRRVSGAYLWI*VLNSDG
Trigger: CCCATCTGAGTTCAAGACCCAGATCCAGAGATACGC...GCCTGACACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp TCCCTGAGAAACTCGGTCCAAAGGGCCTATTGTCTAGGAGGCTCTGAGAAGGGGTATAGTGGCCACCCATaGTGGTTCCGGAGTGATTGG +
Preference number: 4 (lower is better)
Translates to: SLRNSVQRAYCLGGSEKGYSGHP*WFRSDW
Trigger: CCAATCACTCCGGAACCACCATGGGTGGCCACTATA...CCCCTTCTCAGAGCCTCCTAGACAATAGGCCCTTTGGACCGAGTTTCTCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp GTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTGTCTTCACAGGTCTTCTCTaGAGAAGGGTGTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VYTCPWAQVHRSSLEKGVFTGLL*RRVSGQ
Trigger: CTGGCCTGACACCCTTCTCCAGAGAAGACCTGTGAA...GACACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp CAAGTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTGCACCTGAGATGCACTaGCCTTGCGACCATAGTTCT +
Preference number: 4 (lower is better)
Translates to: QVYTCPWAQVHRSSLEKGAPEMH*PCDHSS
Trigger: AGAACTATGGTCGCAAGGGCAGTGCATCTCAGGTGC...ACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR GCA 90 bp GTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTGTCTTATACACCGTTTTCTaGCTCGGCAGCGACAGCATG +
Preference number: 4 (lower is better)
Translates to: VYTCPWAQVHRSSLEKGVLYTVF*LGSDSM
Trigger: CATGCTGTCGCTGCCGAGGCAGAAAACGGTGTATAA...GACACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp ACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCCGGAAGGAATCTACCTaGTTTCTTCTTTGCCTCACT +
Preference number: 4 (lower is better)
Translates to: TSLQMQTPRARGDAGSTSRKEST*FLLCLT
Trigger: AGTGAGGCAAAGAAGAAAGCAGGTAGATTCCTTCCG...GGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp AGACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCAGCAGCGACAGCATGTTaGCTTTTCATCTCCATCAAG +
Preference number: 4 (lower is better)
Translates to: RPQVYKCKRRGHGAMLAPAATAC*LFISIK
Trigger: CTTGATGGAGATGAAAAGCCAACATGCTGTCGCTGC...TGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp GCAGTTACCCCCTGGTCCCCAAATGCTATAAGGCACAATTCTTGGAGGCAACTACTCCCAGGGCAGGACTaGAGACCAGCGCTAAGAAGA +
Preference number: 4 (lower is better)
Translates to: AVTPWSPNAIRHNSWRQLLPGQD*RPALRR
Trigger: TCTTCTTAGCGCTGGTCTCCAGTCCTGCCCTGGGAG...TAGTTGCCTCCAAGAATTGTGCCTTATAGCATTTGGGGACCAGGGGGTAACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp CAGCGTTTTCCAAAGATGTCCCTTCGTCTGTCCCCTGGAGTTAGCAGCGTGAAGTTCACAGGTCTTCTCTaGAGAAGGGTGTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: QRFPKMSLRLSPGVSSVKFTGLL*RRVSGQ
Trigger: CTGGCCTGACACCCTTCTCCAGAGAAGACCTGTGAA...CTTCACGCTGCTAACTCCAGGGGACAGACGAAGGGACATCTTTGGAAAACGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp GAAGCTCTAGGGACGAGGGGCTTGTGCTATCCTTCAAACAGCTGGGGAGCAGACCACATCATTGGGGGATaGAGTCCATATGGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: EALGTRGLCYPSNSWGADHIIGG*SPYGLN
Trigger: ATTCAGACCATATGGACTTCATCCCCCAATGATGTG...GTCTGCTCCCCAGCTGTTTGAAGGATAGCACAAGCCCCTCGTCCCTAGAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp CACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCAGACACAGTTGTTTCTaGCACATAGGAAGACCACAA +
Preference number: 4 (lower is better)
Translates to: HKFTNANAEGTGRCWLHVRHSCF*HIGRPQ
Trigger: TTGTGGTCTTCCTATGTGTCAGAAACAACTGTGTCT...GACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR TCA 90 bp GACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACAAAGAACCATACAACTaGGGCAAGATGTCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: DHKFTNANAEGTGRCWLHKEPYN*GKMSPN
Trigger: ATTTGGGGACATCTTGCCTCAGTTGTATGGTTCTTT...GTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp CAAGTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTTCAACTCCCGAGTGTTaGTCAGGCACTGCAGAATTG +
Preference number: 4 (lower is better)
Translates to: QVYTCPWAQVHRSSLEKGSTPEC*SGTAEL
Trigger: CAATTCTGCAGTGCCTGAGCAACACTCGGGAGTTGA...ACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp CCCACAGGAAAGAACCATACAACTGAGGCAAGATGTCCCCAAATACCCAGGCTCCTCCTGTCCCTGGACTaGGACAGTAGGCTGTATAGT +
Preference number: 4 (lower is better)
Translates to: PTGKNHTTEARCPQIPRLLLSLD*DSRLYS
Trigger: ACTATACAGCCTACTGTCGCAGTCCAGGGACAGGAG...GAGCCTGGGTATTTGGGGACATCTTGCCTCAGTTGTATGGTTCTTTCCTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp CAAGTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTGAGTCGTTGAAAGTGTaGCATTCTCCTGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: QVYTCPWAQVHRSSLEKGESLKV*HSPVPG
Trigger: TCCAGGGACAGGAGAATGGCACACTTTCAACGACTC...ACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp AAATTGAGCCCACAGGAAAGAACCATACAACTGAGGCAAGATGTCCCCAAATACCCAGGCGATCTTCCCTaGCGGGCCACAGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: KLSPQERTIQLRQDVPKYPGDLP*RATAQE
Trigger: TTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGG...GTATTTGGGGACATCTTGCCTCAGTTGTATGGTTCTTTCCTGTGGGCTCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp CAGCGTTTTCCAAAGATGTCCCTTCGTCTGTCCCCTGGAGTTAGCAGCGTGAAGGAGAACCGCTTCAGATaGAGCACCAAGATCTTTGGG +
Preference number: 4 (lower is better)
Translates to: QRFPKMSLRLSPGVSSVKENRFR*STKIFG
Trigger: CCCAAAGATCTTGGTGCTCCATCTGAAGCGGTTCTC...CTTCACGCTGCTAACTCCAGGGGACAGACGAAGGGACATCTTTGGAAAACGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp ACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTGTCAGGCAGACACAGTTGTTTCTaGCACATAGGAAGACCACAA +
Preference number: 4 (lower is better)
Translates to: TLALGLRFTGLLWRRVSGRHSCF*HIGRPQ
Trigger: TTGTGGTCTTCCTATGTGTCAGAAACAACTGTGTCT...GCCTGACACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp AAATTGAGCCCACAGGAAAGAACCATACAACTGAGGCAAGATGTCCCCAAATACCTGTGTGTGCATTGCTaGCGTGGTGCAGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: KLSPQERTIQLRQDVPKYLCVHC*RGAGPA
Trigger: TGCGGGACCTGCACCACGGCAGCAATGCACACACAG...GTATTTGGGGACATCTTGCCTCAGTTGTATGGTTCTTTCCTGTGGGCTCAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp CAGCGTTTTCCAAAGATGTCCCTTCGTCTGTCCCCTGGAGTTAGCAGCGTGAAGCCCCTGGTCCCCAAATaGTATAAGGCACAATTCTTG +
Preference number: 4 (lower is better)
Translates to: QRFPKMSLRLSPGVSSVKPLVPK*YKAQFL
Trigger: CAAGAATTGTGCCTTATAGCATTTGGGGACCAGGGG...CTTCACGCTGCTAACTCCAGGGGACAGACGAAGGGACATCTTTGGAAAACGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp ACATTCTTCTACTCTTGCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTGCACTCAGTGGGGACTaGGAGCCTCATGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TFFYSCLHSKQVYTCPWAALSGD*EPHGLP
Trigger: AGGCAGCCCATGAGGCTCCCAGTCCCCACTGAGTGC...AGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGCAAGAGTAGAAGAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CCA 90 bp CGAGCCAGGGCTAAGGGCAGGATCCCTTTCCCAGGCGGGTTTGAACAGAGCACTATCTTTGGGAACCTCTaGATGGAGAACTTCTTTATA +
Preference number: 4 (lower is better)
Translates to: RARAKGRIPFPGGFEQSTIFGNL*MENFFI
Trigger: TATAAAGAAGTTCTCCATCCAGAGGTTCCCAAAGAT...AGTGCTCTGTTCAAACCCGCCTGGGAAAGGGATCCTGCCCTTAGCCCTGGCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp AAATTGAGCCCACAGGAAAGAACCATACAACTGAGGCAAGATGTCCCCAAATACTCGCTGGTGCGCACTTaGCTGGAGGACATGGGAGTG +
Preference number: 4 (lower is better)
Translates to: KLSPQERTIQLRQDVPKYSLVRT*LEDMGV
Trigger: CACTCCCATGTCCTCCAGCCAAGTGCGCACCAGCGA...GTATTTGGGGACATCTTGCCTCAGTTGTATGGTTCTTTCCTGTGGGCTCAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp ACATTCTTCTACTCTTGCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTCACGAGGGCTGTGTGTaGATTGCTGCCGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: TFFYSCLHSKQVYTCPWAHEGCV*IAAVVQ
Trigger: CTGCACCACGGCAGCAATGCACACACAGCCCTCGTG...AGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGCAAGAGTAGAAGAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp CGAGCCAGGGCTAAGGGCAGGATCCCTTTCCCAGGCGGGTTTGAACAGAGCACTACATTCTTCTACTCTTaGTTACACAGTAAACAAGTG +
Preference number: 4 (lower is better)
Translates to: RARAKGRIPFPGGFEQSTTFFYS*LHSKQV
Trigger: CACTTGTTTACTGTGTAAGCAAGAGTAGAAGAATGT...AGTGCTCTGTTCAAACCCGCCTGGGAAAGGGATCCTGCCCTTAGCCCTGGCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp CCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTATCTTTGGGAACCTCTaGATGGAGAACTTCTTTATA +
Preference number: 4 (lower is better)
Translates to: PQVYKCKRRGHGAMLAPRIFGNL*MENFFI
Trigger: TATAAAGAAGTTCTCCATCCAGAGGTTCCCAAAGAT...ACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CCA 90 bp TGTGTGGGTGAACAGCTTTACTCTCCAGGACAGCACAGAGTTTTATCCAACTATAAGGGAGAAGGGACGTaGCTCCTGGCGCTACATTCG +
Preference number: 4 (lower is better)
Translates to: CVGEQLYSPGQHRVLSNYKGEGT*LLALHS
Trigger: CGAATGTAGCGCCAGGAGCCACGTCCCTTCTCCCTT...ATAGTTGGATAAAACTCTGTGCTGTCCTGGAGAGTAAAGCTGTTCACCCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp AAATTGAGCCCACAGGAAAGAACCATACAACTGAGGCAAGATGTCCCCAAATACCCGGGCCCAGCTGTGTaGGTGAACAGCTTTACTCTC +
Preference number: 4 (lower is better)
Translates to: KLSPQERTIQLRQDVPKYPGPAV*VNSFTL
Trigger: GAGAGTAAAGCTGTTCACCCACACAGCTGGGCCCGG...GTATTTGGGGACATCTTGCCTCAGTTGTATGGTTCTTTCCTGTGGGCTCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp GCAGTTACCCCCTGGTCCCCAAATGCTATAAGGCACAATTCTTGGAGGCAACTAAGTTCACAAATGTTGTaGGCTTGCTGGTTCGGATCC +
Preference number: 4 (lower is better)
Translates to: AVTPWSPNAIRHNSWRQLSSQML*ACWFGS
Trigger: GGATCCGAACCAGCAAGCTCACAACATTTGTGAACT...TAGTTGCCTCCAAGAATTGTGCCTTATAGCATTTGGGGACCAGGGGGTAACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp ACATTCTTCTACTCTTGCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTGCCCAGCTGTGTGGGTaGACAGCTTTACTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TFFYSCLHSKQVYTCPWAAQLCG*TALLSR
Trigger: CCTGGAGAGTAAAGCTGTTCACCCACACAGCTGGGC...AGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGCAAGAGTAGAAGAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp ACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGACATTCTTCTACTCTTaGTTACACAGTAAACAAGTG +
Preference number: 4 (lower is better)
Translates to: TTSLQMQTPRARGDAGSTTFFYS*LHSKQV
Trigger: CACTTGTTTACTGTGTAAGCAAGAGTAGAAGAATGT...CGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp GCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTTGGTTCCGGAGTGATTaGACACAGCGTACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: AYTVNKCTLALGLRFTGLWFRSD*TQRTGC
Trigger: ACAACCTGTACGCTGTGTCCAATCACTCCGGAACCA...AAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp GCAGTTACCCCCTGGTCCCCAAATGCTATAAGGCACAATTCTTGGAGGCAACTAGTGTTGCTCAGGCACTaGAGAATTGAGTTCATGAAG +
Preference number: 4 (lower is better)
Translates to: AVTPWSPNAIRHNSWRQLVLLRH*RIEFMK
Trigger: CTTCATGAACTCAATTCTGCAGTGCCTGAGCAACAC...TAGTTGCCTCCAAGAATTGTGCCTTATAGCATTTGGGGACCAGGGGGTAACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp TGCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTAAACAAGTGTACACTTaGCCTTGGGCTCAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: CLHSKQVYTCPWAQVHRSKQVYT*PWAQVH
Trigger: GTGAACCTGAGCCCAAGGGCAAGTGTACACTTGTTT...AGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp TCCCTGAGAAACTCGGTCCAAAGGGCCTATTGTCTAGGAGGCTCTGAGAAGGGGTGTAAACAGCATGGTTaGTGTTTTCTGAGGCAAATT +
Preference number: 4 (lower is better)
Translates to: SLRNSVQRAYCLGGSEKGCKQHG*CFLRQI
Trigger: AATTTGCCTCAGAAAACACCAACCATGCTGTTTACA...CCCCTTCTCAGAGCCTCCTAGACAATAGGCCCTTTGGACCGAGTTTCTCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp CAAGTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTGAAGTCCATATGGTCTaGATTAGTTTTGCAAACTCT +
Preference number: 4 (lower is better)
Translates to: QVYTCPWAQVHRSSLEKGEVHMV*ISFANS
Trigger: AGAGTTTGCAAAACTAATTCAGACCATATGGACTTC...ACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR TCA 90 bp GCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCACATCATTGGGGGATaGAGTCCATATGGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: AYTVNKCTLALGLRFTGLHIIGG*SPYGLN
Trigger: ATTCAGACCATATGGACTTCATCCCCCAATGATGTG...AAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR GCA 90 bp TCTACTCTTGCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTCAGGTTCAAACAAGTGTACACTTaGCCTTGGGCTCAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: STLAYTVNKCTLALGLRFKQVYT*PWAQVH
Trigger: GTGAACCTGAGCCCAAGGGCAAGTGTACACTTGTTT...GAACCTGAGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGCAAGAGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp AAATTGAGCCCACAGGAAAGAACCATACAACTGAGGCAAGATGTCCCCAAATACGGTCTTGAACTCAGATaGGCTCACCACATCATTGGG +
Preference number: 4 (lower is better)
Translates to: KLSPQERTIQLRQDVPKYGLELR*AHHIIG
Trigger: CCCAATGATGTGGTGAGCCCATCTGAGTTCAAGACC...GTATTTGGGGACATCTTGCCTCAGTTGTATGGTTCTTTCCTGTGGGCTCAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp ACATTCTTCTACTCTTGCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTGAGCACCAAGATCTTTaGGAACCTCTGGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: TFFYSCLHSKQVYTCPWAEHQDL*EPLDGE
Trigger: TTCTCCATCCAGAGGTTCCCAAAGATCTTGGTGCTC...AGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGCAAGAGTAGAAGAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp TGCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTGTAAACAGCATGGTTaGTGTTTTCTGAGGCAAATT +
Preference number: 4 (lower is better)
Translates to: CLHSKQVYTCPWAQVHRSCKQHG*CFLRQI
Trigger: AATTTGCCTCAGAAAACACCAACCATGCTGTTTACA...AGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
3UTR CAA 72 bp ACAGCACAGAGTTTTATCCAACTATGTAGGGCAAAATaGAGCCCACAGGAAAGAACCATACAACTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: TAQSFIQLCRAK*SPQERTIQLRQ
Trigger: TTGCCTCAGTTGTATGGTTCTTTCCTGTGGGCTCAATTTTGCCCTACATAGTTGGATAAAACTCTGTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp AAATTGAGCCCACAGGAAAGAACCATACAACTGAGGCAAGATGTCCCCAAATACATAAGGCACAATTCTTaGAGGCAACTAAATTCCATT +
Preference number: 4 (lower is better)
Translates to: KLSPQERTIQLRQDVPKYIRHNS*RQLNSI
Trigger: AATGGAATTTAGTTGCCTCCAAGAATTGTGCCTTAT...GTATTTGGGGACATCTTGCCTCAGTTGTATGGTTCTTTCCTGTGGGCTCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CCA 90 bp ACATTCTTCTACTCTTGCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTATAAGGCACAATTCTTaGAGGCAACTAAATTCCATT +
Preference number: 4 (lower is better)
Translates to: TFFYSCLHSKQVYTCPWAIRHNS*RQLNSI
Trigger: AATGGAATTTAGTTGCCTCCAAGAATTGTGCCTTAT...AGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGCAAGAGTAGAAGAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS TCA 90 bp CGGGTGAGTCCCGGCTGGCGCTGGCGCGGCGCAGTGAGCACCAGCTaGCGAAGAGGGCTCCCCGGCCTCGGCTCCTGCCTGACTCTCTCC +
Preference number: 5 (lower is better)
Translates to: RVSPGWRWRGAVSTS*RRGLPGLGSCLTLS
Trigger: GGAGAGAGTCAGGCAGGAGCCGAGGCCGGGGAGCCCTCTTCGTCAGCTGGTGCTCACTGCGCCGCGCCAGCGCCAGCCGGGACTCACCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CAA 90 bp AGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGGGTGCAGAGCTCCTaGCGCGTCCGGGCCAGCATG +
Preference number: 5 (lower is better)
Translates to: RARGDAGSTSRRSSLPGHRVQSS*RVRASM
Trigger: CATGCTGGCCCGGACGCGCAAGGAGCTCTGCACCCT...GTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CAA 90 bp TGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGCGGCCGCAGCTCCTaGGCGAGGGCGGGAAAGGGG +
Preference number: 5 (lower is better)
Translates to: CWLHVQAIFPAGPQLRKARGRSS*ARAGKG
Trigger: CCCCTTTCCCGCCCTCGCCAAGGAGCTGCGGCCGCG...GGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525735.1
CDS-3UTR CAA 90 bp GCTCCCAGCGAGCTCCAGAGGGCGCTGTCCCCTCGGAGGCGCGGGCGCTGCGGCCTCAACTCCCGAGTGTaGCTCAGGCACTGCAGAATT +
Preference number: 5 (lower is better)
Translates to: APSELQRALSPRRRGRCGLNSRV*LRHCRI
Trigger: AATTCTGCAGTGCCTGAGCAACACTCGGGAGTTGAG...GCCGCAGCGCCCGCGCCTCCGAGGGGACAGCGCCCTCTGGAGCTCGCTGGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CAA 90 bp GGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAAGGGCTGTGTGTGCATaGCTGCCGTGGTGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GHGAMLAPRPGDLPCRATRAVCA*LPWCRS
Trigger: GGACCTGCACCACGGCAGCAATGCACACACAGCCCT...TGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS GCA 90 bp CCTGCAGGGTGCAGAGCTCCTTGCGCGTCCGGGCCAGCATGGGGCTaGGGCCCAGGTTCCTGGGGTCTATCCGGTAGCTATCTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: PAGCRAPCASGPAWG*GPGSWGLSGSYLRS
Trigger: GGACCTCAGATAGCTACCGGATAGACCCCAGGAACCTGGGCCGCAGCCCCATGCTGGCCCGGACGCGCAAGGAGCTCTGCACCCTGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS CCA 90 bp AGAGCCCCTGCAGGGTGCAGAGCTCCTTGCGCGTCCGGGCCAGCATaGGGCTGCGGCCCAGGTTCCTGGGGTCTATCCGGTAGCTATCTG +
Preference number: 5 (lower is better)
Translates to: RAPAGCRAPCASGPA*GCGPGSWGLSGSYL
Trigger: CAGATAGCTACCGGATAGACCCCAGGAACCTGGGCCGCAGCCCCATGCTGGCCCGGACGCGCAAGGAGCTCTGCACCCTGCAGGGGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CAA 90 bp CGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCCTGGTGGGGACCGGCTaGAAACCAAGTTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RGHGAMLAPRPGDLPCRALVGTG*KPSFSF
Trigger: GAAGGAGAAACTTGGTTTCAAGCCGGTCCCCACCAG...GGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CAA 90 bp TGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGAGGGCTGTGTGTGCATaGCTGCCGTGGTGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: WLHVQAIFPAGPQLRKARRAVCA*LPWCRS
Trigger: GGACCTGCACCACGGCAGCAATGCACACACAGCCCT...CCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS CCA 90 bp GCTCCTTGCGCGTCCGGGCCAGCATGGGGCTGCGGCCCAGGTTCCTaGGGTCTATCCGGTAGCTATCTGAGGTCCGGAGGCTGGAGAAAT +
Preference number: 5 (lower is better)
Translates to: APCASGPAWGCGPGS*GLSGSYLRSGGWRN
Trigger: ATTTCTCCAGCCTCCGGACCTCAGATAGCTACCGGATAGACCCCAGGAACCTGGGCCGCAGCCCCATGCTGGCCCGGACGCGCAAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS CCA 90 bp GGGAGAAGGGACGTGGCTCCTGGCGCTACATTCGGGAGGGCGGGCTaGCCAGTTCGTAGAAGAGCAGGTAGGCGTCGCTGGTGCGCACTT +
Preference number: 5 (lower is better)
Translates to: GRRDVAPGATFGRAG*PVRRRAGRRRWCAL
Trigger: AAGTGCGCACCAGCGACGCCTACCTGCTCTTCTACGAACTGGCCAGCCCGCCCTCCCGAATGTAGCGCCAGGAGCCACGTCCCTTCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp CCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCGGGCTCACCACATCATaGGGGGATGAAGTCCATATG +
Preference number: 5 (lower is better)
Translates to: PRARGDAGSTSRRSSLPGGLTTS*GDEVHM
Trigger: CATATGGACTTCATCCCCCAATGATGTGGTGAGCCC...GCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp GGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACACTCTGGATCTGGGTCTaGAACTCAGATGGGCTCACC +
Preference number: 5 (lower is better)
Translates to: GHGAMLAPRPGDLPCRATLWIWV*NSDGLT
Trigger: GGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGAG...TGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp CCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCGGAGCACCAAGATCTTaGGGAACCTCTGGATGGAGA +
Preference number: 5 (lower is better)
Translates to: PRARGDAGSTSRRSSLPGGAPRS*GTSGWR
Trigger: TCTCCATCCAGAGGTTCCCAAAGATCTTGGTGCTCC...GCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp GCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACGGAAAGCCCGGCTCCTaGCTCCAGACCCTGATCAGG +
Preference number: 5 (lower is better)
Translates to: AIFPAGPQLRKARLLAPDGKPGS*LQTLIR
Trigger: CCTGATCAGGGTCTGGAGCAAGGAGCCGGGCTTTCC...GTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp GGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAAGTGTACACTTGCCCTaGGGCTCAGGTTCACAGGTC +
Preference number: 5 (lower is better)
Translates to: GHGAMLAPRPGDLPCRATSVHLP*GSGSQV
Trigger: GACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACT...TGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CAA 90 bp AGACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCAGGCCCTCGCTTAACGTaGGCAGCGGGGGCGCGGGGG +
Preference number: 5 (lower is better)
Translates to: RPQVYKCKRRGHGAMLAPGPRLT*AAGARG
Trigger: CCCCCGCGCCCCCGCTGCCAACGTTAAGCGAGGGCC...TGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525735.1
CDS-3UTR CAA 90 bp CGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCGAATTCTTGGCTTTGTaGAGCAGGAGCCCCACGAAG +
Preference number: 5 (lower is better)
Translates to: RGHGAMLAPRPGDLPCRAEFLAL*SRSPTK
Trigger: CTTCGTGGGGCTCCTGCTCAACAAAGCCAAGAATTC...GGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525735.1
CDS-3UTR CAA 90 bp GGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACACTCAACTCCCGAGTGTaGCTCAGGCACTGCAGAATT +
Preference number: 5 (lower is better)
Translates to: GHGAMLAPRPGDLPCRATLNSRV*LRHCRI
Trigger: AATTCTGCAGTGCCTGAGCAACACTCGGGAGTTGAG...TGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp GAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCAGTGACGCTGGAGTCGTaGAAAGTGTGCCATTCTCCT +
Preference number: 5 (lower is better)
Translates to: EGTGRCWLHVQAIFPAGPVTLES*KVCHSP
Trigger: AGGAGAATGGCACACTTTCAACGACTCCAGCGTCAC...TGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp CAGACCAGGGGTGGGCTAGAGGACGTGGGCGGGAAGAACTTGATGCCCTGTCGGGTCGCTGGTGCGCACTaGGCTGGAGGACATGGGAGT +
Preference number: 5 (lower is better)
Translates to: QTRGGLEDVGGKNLMPCRVAGAH*AGGHGS
Trigger: ACTCCCATGTCCTCCAGCCAAGTGCGCACCAGCGAC...CCGACAGGGCATCAAGTTCTTCCCGCCCACGTCCTCTAGCCCACCCCTGGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CAA 90 bp CCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCGTGGGCGGGAAGAACTaGATGCCCTGTCGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: PGDLPCRATAQESPAPCSVGGKN*MPCRKE
Trigger: TTCCTTCCGACAGGGCATCAAGTTCTTCCCGCCCAC...GGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CAA 90 bp TGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCTGGATCTGGGTCTaGAACTCAGATGGGCTCACC +
Preference number: 5 (lower is better)
Translates to: WLHVQAIFPAGPQLRKARLWIWV*NSDGLT
Trigger: GGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGAG...CCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp CCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCCTCTGGATCTGGGTCTaGAACTCAGATGGGCTCACC +
Preference number: 5 (lower is better)
Translates to: PGDLPCRATAQESPAPCSLWIWV*NSDGLT
Trigger: GGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGAG...GGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp GAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCATCAAGCACATCCTCTTaGGTGAAGAGCCTCATGCAG +
Preference number: 5 (lower is better)
Translates to: EGTGRCWLHVQAIFPAGPSSTSS*VKSLMQ
Trigger: CTGCATGAGGCTCTTCACCAAAGAGGATGTGCTTGA...TGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp CCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACCCTGATCAGGCTGCATCCGGAAAGCCCGGCTCCTaGCTCCAGACCCTGATCAGG +
Preference number: 5 (lower is better)
Translates to: PQLRKARLLAPDPDQAASGKPGS*LQTLIR
Trigger: CCTGATCAGGGTCTGGAGCAAGGAGCCGGGCTTTCC...GGATGCAGCCTGATCAGGGTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp CCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTCTAGGGACGAGGGGCTaGTGCTATCCTTCAAACAGC +
Preference number: 5 (lower is better)
Translates to: PRPGDLPCRATAQESPAPLGTRG*CYPSNS
Trigger: GCTGTTTGAAGGATAGCACAAGCCCCTCGTCCCTAG...AGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CAA 90 bp CCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCGGGCTCACCACATCATaGGGGGATGAAGTCCATATG +
Preference number: 5 (lower is better)
Translates to: PGDLPCRATAQESPAPCSGLTTS*GDEVHM
Trigger: CATATGGACTTCATCCCCCAATGATGTGGTGAGCCC...GGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp TCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCTTTCCCAGGCGGGTTaGAACAGAGCACTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: SRRSSLPGHSSGKPGSLLLSQAG*NRALGK
Trigger: TTTCCCCAGTGCTCTGTTCAAACCCGCCTGGGAAAG...GAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CAA 90 bp TGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCTTTCCCAGGCGGGTTaGAACAGAGCACTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: CWLHVQAIFPAGPQLRKALSQAG*NRALGK
Trigger: TTTCCCCAGTGCTCTGTTCAAACCCGCCTGGGAAAG...GGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS CCA 90 bp AGTGGGCATCTGTGTAGCGGGCCGATTCTGTGTAGCGCTTCAGGGTaGAGGAGAGCTGGGACATCCTTCAGGGTGGCACTCAGTGGGGAC +
Preference number: 5 (lower is better)
Translates to: SGHLCSGPILCSASG*RRAGTSFRVALSGD
Trigger: GTCCCCACTGAGTGCCACCCTGAAGGATGTCCCAGCTCTCCTCCACCCTGAAGCGCTACACAGAATCGGCCCGCTACACAGATGCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000527843.1
ENST00000531070.1
CDS CCA 90 bp CCAGGTTCCTGGGGTCTATCCGGTAGCTATCTGAGGTCCGGAGGCTaGAGAAATCCCGGGCCAGGTCTGATTGGCTGTCCAGCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: PGSWGLSGSYLRSGG*RNPGPGLIGCPASG
Trigger: CCCAGAAGCTGGACAGCCAATCAGACCTGGCCCGGGATTTCTCCAGCCTCCGGACCTCAGATAGCTACCGGATAGACCCCAGGAACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000531070.1
CDS CCA 90 bp TGCGACCATAGTTCTCCAGGTAGTCGACCAGGTATTCAGGGCAGCTaGCTGTCTGGTAGAGCCCCTGCAGGGTGCAGAGCTCCTTGCGCG +
Preference number: 5 (lower is better)
Translates to: CDHSSPGSRPGIQGS*LSGRAPAGCRAPCA
Trigger: CGCGCAAGGAGCTCTGCACCCTGCAGGGGCTCTACCAGACAGCCAGCTGCCCTGAATACCTGGTCGACTACCTGGAGAACTATGGTCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS-3UTR CAA 90 bp GTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTTCGAGGTTCTCAGGGTaGGACTTAGGTCTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: VQAIFPAGPQLRKARLLASRFSG*DLGLSV
Trigger: GACACTGAGACCTAAGTCCAACCCTGAGAACCTCGA...AGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp TGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCGGAGCACCAAGATCTTaGGGAACCTCTGGATGGAGA +
Preference number: 5 (lower is better)
Translates to: CWLHVQAIFPAGPQLRKAGAPRS*GTSGWR
Trigger: TCTCCATCCAGAGGTTCCCAAAGATCTTGGTGCTCC...GGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp ACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCGTCGCTGGTGCGCACTaGGCTGGAGGACATGGGAGT +
Preference number: 5 (lower is better)
Translates to: TSLQMQTPRARGDAGSTSVAGAH*AGGHGS
Trigger: ACTCCCATGTCCTCCAGCCAAGTGCGCACCAGCGAC...GGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp CACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCGGAAAGCCCGGCTCCTaGCTCCAGACCCTGATCAGG +
Preference number: 5 (lower is better)
Translates to: HKFTNANAEGTGRCWLHVGKPGS*LQTLIR
Trigger: CCTGATCAGGGTCTGGAGCAAGGAGCCGGGCTTTCC...GACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS CCA 90 bp GATTGGCCCCATAGGAGGACGGGGTGTAGGCACCATAGCCCGACTTaGCATAGTGGGCATCTGTGTAGCGGGCCGATTCTGTGTAGCGCT +
Preference number: 5 (lower is better)
Translates to: DWPHRRTGCRHHSPT*HSGHLCSGPILCSA
Trigger: AGCGCTACACAGAATCGGCCCGCTACACAGATGCCCACTATGCCAAGTCGGGCTATGGTGCCTACACCCCGTCCTCCTATGGGGCCAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000527843.1
ENST00000531070.1
CDS-3UTR CAA 90 bp TCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCGGCAGCGACAGCATGTaGGCTTTTCATCTCCATCAA +
Preference number: 5 (lower is better)
Translates to: SRRSSLPGHSSGKPGSLLGSDSM*AFHLHQ
Trigger: TTGATGGAGATGAAAAGCCAACATGCTGTCGCTGCC...GAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp GTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTGGCAGCGACAGCATGTaGGCTTTTCATCTCCATCAA +
Preference number: 5 (lower is better)
Translates to: VQAIFPAGPQLRKARLLAGSDSM*AFHLHQ
Trigger: TTGATGGAGATGAAAAGCCAACATGCTGTCGCTGCC...AGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp AATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCAGGCGATCTTCGGAGCACCAAGATCTTaGGGAACCTCTGGATGGAGA +
Preference number: 5 (lower is better)
Translates to: NANAEGTGRCWLHVQAIFGAPRS*GTSGWR
Trigger: TCTCCATCCAGAGGTTCCCAAAGATCTTGGTGCTCC...GAAGATCGCCTGGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp AGACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCAGTCGCTGGTGCGCACTaGGCTGGAGGACATGGGAGT +
Preference number: 5 (lower is better)
Translates to: RPQVYKCKRRGHGAMLAPVAGAH*AGGHGS
Trigger: ACTCCCATGTCCTCCAGCCAAGTGCGCACCAGCGAC...TGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp TCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACCCTGATCTTAGAATTCTTGGCTTaGTTGAGCAGGAGCCCCACG +
Preference number: 5 (lower is better)
Translates to: SLPGHSSGKPGSLLQTLILEFLA*LSRSPT
Trigger: CGTGGGGCTCCTGCTCAACAAAGCCAAGAATTCTAA...GATCAGGGTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525735.1
CDS-3UTR CAA 90 bp TGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGTGGTCTGAATTAGTTTaGCAAACTCTTCCACGAGGG +
Preference number: 5 (lower is better)
Translates to: WLHVQAIFPAGPQLRKARWSELV*QTLPRG
Trigger: CCCTCGTGGAAGAGTTTGCAAAACTAATTCAGACCA...CCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS CCA 90 bp GGGAGTGACGCTGGAGTCGTTGAAAGTGTGCCATTCTCCTGTCCCTaGACTGCGACAGTAGGCTGTATAGTGGCCACCCATGGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: GSDAGVVESVPFSCP*TATVGCIVATHGGS
Trigger: GGAACCACCATGGGTGGCCACTATACAGCCTACTGTCGCAGTCCAGGGACAGGAGAATGGCACACTTTCAACGACTCCAGCGTCACTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp CAAGTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTAGGGCTGTGTGTGCATaGCTGCCGTGGTGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: QVYTCPWAQVHRSSLEKGRAVCA*LPWCRS
Trigger: GGACCTGCACCACGGCAGCAATGCACACACAGCCCT...ACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CAA 90 bp TGCTGGCTCCACGTCCAGGCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCTGGTCTGAATTAGTTTaGCAAACTCTTCCACGAGGG +
Preference number: 5 (lower is better)
Translates to: CWLHVQAIFPAGPQLRKAWSELV*QTLPRG
Trigger: CCCTCGTGGAAGAGTTTGCAAAACTAATTCAGACCA...GGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGCCTGGACGTGGAGCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp TCCACGGGGCACAAGCCGGGCCCAGCTGTGTGGGTGAACAGCTTTACTCTCCAGTCAAGCACATCCTCTTaGGTGAAGAGCCTCATGCAG +
Preference number: 5 (lower is better)
Translates to: STGHKPGPAVWVNSFTLQSSTSS*VKSLMQ
Trigger: CTGCATGAGGCTCTTCACCAAAGAGGATGTGCTTGA...CTGGAGAGTAAAGCTGTTCACCCACACAGCTGGGCCCGGCTTGTGCCCCGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CAA 90 bp ATGTCCCTTCGTCTGTCCCCTGGAGTTAGCAGCGTGAAGAGGGCTCTTGGCTCAGTGGGCGGGAAGAACTaGATGCCCTGTCGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: MSLRLSPGVSSVKRALGSVGGKN*MPCRKE
Trigger: TTCCTTCCGACAGGGCATCAAGTTCTTCCCGCCCAC...TGAGCCAAGAGCCCTCTTCACGCTGCTAACTCCAGGGGACAGACGAAGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CAA 90 bp CAGACCAGGGGTGGGCTAGAGGACGTGGGCGGGAAGAACTTGATGCCCTGTCGGCTATGTAGGGCAAAATaGAGCCCACAGGAAAGAACC +
Preference number: 5 (lower is better)
Translates to: QTRGGLEDVGGKNLMPCRLCRAK*SPQERT
Trigger: GGTTCTTTCCTGTGGGCTCAATTTTGCCCTACATAG...CCGACAGGGCATCAAGTTCTTCCCGCCCACGTCCTCTAGCCCACCCCTGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CAA 90 bp CACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCGTGACGCTGGAGTCGTaGAAAGTGTGCCATTCTCCT +
Preference number: 5 (lower is better)
Translates to: HKFTNANAEGTGRCWLHVVTLES*KVCHSP
Trigger: AGGAGAATGGCACACTTTCAACGACTCCAGCGTCAC...GACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp GAAGCTCTAGGGACGAGGGGCTTGTGCTATCCTTCAAACAGCTGGGGAGCAGACAGTGTACACTTGCCCTaGGGCTCAGGTTCACAGGTC +
Preference number: 5 (lower is better)
Translates to: EALGTRGLCYPSNSWGADSVHLP*GSGSQV
Trigger: GACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACT...GTCTGCTCCCCAGCTGTTTGAAGGATAGCACAAGCCCCTCGTCCCTAGAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CAA 90 bp CCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACCCTGATCAGGCTGCATCCGCACTCTTAGAATTCTaGGCTTTGTTGAGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: PQLRKARLLAPDPDQAASALLEF*ALLSRS
Trigger: GCTCCTGCTCAACAAAGCCAAGAATTCTAAGAGTGC...GGATGCAGCCTGATCAGGGTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525735.1
CDS CCA 90 bp CTCCTGTCCCTGGACTGCGACAGTAGGCTGTATAGTGGCCACCCATaGTGGTTCCGGAGTGATTGGACACAGCGTACAGGTTGTAAACAG +
Preference number: 5 (lower is better)
Translates to: LLSLDCDSRLYSGHP*WFRSDWTQRTGCKQ
Trigger: CTGTTTACAACCTGTACGCTGTGTCCAATCACTCCGGAACCACCATGGGTGGCCACTATACAGCCTACTGTCGCAGTCCAGGGACAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp GACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGGCAGCGACAGCATGTaGGCTTTTCATCTCCATCAA +
Preference number: 5 (lower is better)
Translates to: DHKFTNANAEGTGRCWLHGSDSM*AFHLHQ
Trigger: TTGATGGAGATGAAAAGCCAACATGCTGTCGCTGCC...GTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS GCA 90 bp TCTGAATTAGTTTTGCAAACTCTTCCACGAGGGCTGTGTGTGCATTaGTGCCGTGGTGCAGGTCCCGCATGTAGAGCCTCTGGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: SELVLQTLPRGLCVH*CRGAGPACRASGGS
Trigger: ACTGCCTCCAGAGGCTCTACATGCGGGACCTGCACCACGGCAGCAATGCACACACAGCCCTCGTGGAAGAGTTTGCAAAACTAATTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525189.5
ENST00000525735.1
ENST00000532613.1
CDS CCA 90 bp CTGTCCCTGGACTGCGACAGTAGGCTGTATAGTGGCCACCCATGGTaGTTCCGGAGTGATTGGACACAGCGTACAGGTTGTAAACAGCAT +
Preference number: 5 (lower is better)
Translates to: LSLDCDSRLYSGHPW*FRSDWTQRTGCKQH
Trigger: ATGCTGTTTACAACCTGTACGCTGTGTCCAATCACTCCGGAACCACCATGGGTGGCCACTATACAGCCTACTGTCGCAGTCCAGGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp GGACGTGGGCGGGAAGAACTTGATGCCCTGTCGGAAGGAATCTACCTGCTTTCTGTGACGCTGGAGTCGTaGAAAGTGTGCCATTCTCCT +
Preference number: 5 (lower is better)
Translates to: GRGREELDALSEGIYLLSVTLES*KVCHSP
Trigger: AGGAGAATGGCACACTTTCAACGACTCCAGCGTCAC...AGAAAGCAGGTAGATTCCTTCCGACAGGGCATCAAGTTCTTCCCGCCCACGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CAA 90 bp GCGATCTTCCCTGCCGGGCCACAGCTCAGGAAAGCCCGGCTCCTTGCTCCAGACAGGTTTGTTTTTCTCTaGTCAGGTTTGTGTGTTGTT +
Preference number: 5 (lower is better)
Translates to: AIFPAGPQLRKARLLAPDRFVFL*SGLCVV
Trigger: AACAACACACAAACCTGACAAGAGAAAAACAAACCT...GTCTGGAGCAAGGAGCCGGGCTTTCCTGAGCTGTGGCCCGGCAGGGAAGATCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp CCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCTATGTAGGGCAAAATaGAGCCCACAGGAAAGAACC +
Preference number: 5 (lower is better)
Translates to: PQVYKCKRRGHGAMLAPRLCRAK*SPQERT
Trigger: GGTTCTTTCCTGTGGGCTCAATTTTGCCCTACATAG...ACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CAA 90 bp ACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGGAATTCTGCCTCTTCTaGGAGTATGGACGAGTCGAA +
Preference number: 5 (lower is better)
Translates to: TTSLQMQTPRARGDAGSTEFCLF*EYGRVE
Trigger: TTCGACTCGTCCATACTCCAAGAAGAGGCAGAATTC...CGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455332.6
CDS GCA 90 bp GAATTAGTTTTGCAAACTCTTCCACGAGGGCTGTGTGTGCATTGCTaGCGTGGTGCAGGTCCCGCATGTAGAGCCTCTGGAGGCAGTAAT +
Preference number: 5 (lower is better)
Translates to: ELVLQTLPRGLCVHC*RGAGPACRASGGSN
Trigger: ATTACTGCCTCCAGAGGCTCTACATGCGGGACCTGCACCACGGCAGCAATGCACACACAGCCCTCGTGGAAGAGTTTGCAAAACTAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525189.5
ENST00000525735.1
ENST00000532613.1
CDS GCA 90 bp GAGGACATGTCTGCAAGGCCCTTACTTATAGCCAACAAAGCGCGGTaGGTATCTCTGGATCTGGGTCTTGAACTCAGATGGGCTCACCAC +
Preference number: 5 (lower is better)
Translates to: EDMSARPLLIANKAR*VSLDLGLELRWAHH
Trigger: GTGGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGAGATACGCACCGCGCTTTGTTGGCTATAAGTAAGGGCCTTGCAGACATGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525189.5
CDS-3UTR CAA 90 bp ACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACGTCCTCGGCAGCTTCAGGTTaGTTTTTCTCTTGTCAGGTT +
Preference number: 5 (lower is better)
Translates to: TSLQMQTPRARGDAGSTSSAASG*FFSCQV
Trigger: AACCTGACAAGAGAAAAACAAACCTGAAGCTGCCGA...GGACGTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS TCA 90 bp AGCAACACCTCTTGTCCTAAGAACCTGCTCCTACTGCCACCCACCTaGGAGGACATGTCTGCAAGGCCCTTACTTATAGCCAACAAAGCG +
Preference number: 5 (lower is better)
Translates to: SNTSCPKNLLLLPPT*EDMSARPLLIANKA
Trigger: CGCTTTGTTGGCTATAAGTAAGGGCCTTGCAGACATGTCCTCTCAGGTGGGTGGCAGTAGGAGCAGGTTCTTAGGACAAGAGGTGTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525189.5
CDS-3UTR CAA 90 bp ACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTGTCAGGCTGGTCTGAATTAGTTTaGCAAACTCTTCCACGAGGG +
Preference number: 5 (lower is better)
Translates to: TLALGLRFTGLLWRRVSGWSELV*QTLPRG
Trigger: CCCTCGTGGAAGAGTTTGCAAAACTAATTCAGACCA...GCCTGACACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS CCA 90 bp AGAACCGCTTCAGATGGAGCACCAAGATCTTTGGGAACCTCTGGATaGAGAACTTCTTTATACACCGTTTTCTGCCTCGGCAGCGACAGC +
Preference number: 5 (lower is better)
Translates to: RTASDGAPRSLGTSG*RTSLYTVFCLGSDS
Trigger: GCTGTCGCTGCCGAGGCAGAAAACGGTGTATAAAGAAGTTCTCCATCCAGAGGTTCCCAAAGATCTTGGTGCTCCATCTGAAGCGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS CCA 90 bp GACAGTAGGCTGTATAGTGGCCACCCATGGTGGTTCCGGAGTGATTaGACACAGCGTACAGGTTGTAAACAGCATGGTTGGTGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: DSRLYSGHPWWFRSD*TQRTGCKQHGWCFL
Trigger: CAGAAAACACCAACCATGCTGTTTACAACCTGTACGCTGTGTCCAATCACTCCGGAACCACCATGGGTGGCCACTATACAGCCTACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp GCAGTTACCCCCTGGTCCCCAAATGCTATAAGGCACAATTCTTGGAGGCAACTAATGGGCTGCCTCTTCTaGGAGTATGGACGAGTCGAA +
Preference number: 5 (lower is better)
Translates to: AVTPWSPNAIRHNSWRQLMGCLF*EYGRVE
Trigger: TTCGACTCGTCCATACTCCAAGAAGAGGCAGCCCAT...TAGTTGCCTCCAAGAATTGTGCCTTATAGCATTTGGGGACCAGGGGGTAACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS TCA 90 bp GATTATAGCCAACAAAGCGCGGTGCGTATCTCTGGATCTGGGTCTTaGACTCAGATGGGCTCACCACATCATTGGGGGATGAAGTCCATA +
Preference number: 5 (lower is better)
Translates to: DYSQQSAVRISGSGS*TQMGSPHHWGMKSI
Trigger: TATGGACTTCATCCCCCAATGATGTGGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGAGATACGCACCGCGCTTTGTTGGCTATAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
ENST00000532613.1
CDS TCA 90 bp ACTTATAGCCAACAAAGCGCGGTGCGTATCTCTGGATCTGGGTCTTaGACTCAGATGGGCTCACCACATCATTGGGGGATGAAGTCCATA +
Preference number: 5 (lower is better)
Translates to: TYSQQSAVRISGSGS*TQMGSPHHWGMKSI
Trigger: TATGGACTTCATCCCCCAATGATGTGGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGAGATACGCACCGCGCTTTGTTGGCTATAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525189.5
CDS CCA 90 bp TCTGAGAACCGCTTCAGATGGAGCACCAAGATCTTTGGGAACCTCTaGATGGAGAACTTCTTTATACACCGTTTTCTGCCTCGGCAGCGA +
Preference number: 5 (lower is better)
Translates to: SENRFRWSTKIFGNL*MENFFIHRFLPRQR
Trigger: TCGCTGCCGAGGCAGAAAACGGTGTATAAAGAAGTTCTCCATCCAGAGGTTCCCAAAGATCTTGGTGCTCCATCTGAAGCGGTTCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS CCA 90 bp GTGAGCTTGCTGGTTCGGATCCTGGATTCTGAGAACCGCTTCAGATaGAGCACCAAGATCTTTGGGAACCTCTGGATGGAGAACTTCTTT +
Preference number: 5 (lower is better)
Translates to: VSLLVRILDSENRFR*STKIFGNLWMENFF
Trigger: AAAGAAGTTCTCCATCCAGAGGTTCCCAAAGATCTTGGTGCTCCATCTGAAGCGGTTCTCAGAATCCAGGATCCGAACCAGCAAGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp GCTTACACAGTAAACAAGTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTTCGAGGTTCTCAGGGTaGGACTTAGGTCTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: AYTVNKCTLALGLRFTGLSRFSG*DLGLSV
Trigger: GACACTGAGACCTAAGTCCAACCCTGAGAACCTCGA...AAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTGTTTACTGTGTAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CAA 90 bp GACCACAAGTTTACAAATGCAAACGCCGAGGGCACGGGGCGATGCTGGCTCCACAGGTTTGTTTTTCTCTaGTCAGGTTTGTGTGTTGTT +
Preference number: 5 (lower is better)
Translates to: DHKFTNANAEGTGRCWLHRFVFL*SGLCVV
Trigger: AACAACACACAAACCTGACAAGAGAAAAACAAACCT...GTGGAGCCAGCATCGCCCCGTGCCCTCGGCGTTTGCATTTGTAAACTTGTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp CAAGTGTACACTTGCCCTTGGGCTCAGGTTCACAGGTCTTCTCTGGAGAAGGGTTCGGCAGCTTCAGGTTaGTTTTTCTCTTGTCAGGTT +
Preference number: 5 (lower is better)
Translates to: QVYTCPWAQVHRSSLEKGSAASG*FFSCQV
Trigger: AACCTGACAAGAGAAAAACAAACCTGAAGCTGCCGA...ACCCTTCTCCAGAGAAGACCTGTGAACCTGAGCCCAAGGGCAAGTGTACACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS TCA 90 bp GAAGTTCACAAATGTTGTGAGCTTGCTGGTTCGGATCCTGGATTCTaGGAACCGCTTCAGATGGAGCACCAAGATCTTTGGGAACCTCTG +
Preference number: 5 (lower is better)
Translates to: EVHKCCELAGSDPGF*EPLQMEHQDLWEPL
Trigger: CAGAGGTTCCCAAAGATCTTGGTGCTCCATCTGAAGCGGTTCTCAGAATCCAGGATCCGAACCAGCAAGCTCACAACATTTGTGAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp ATGTCCCTTCGTCTGTCCCCTGGAGTTAGCAGCGTGAAGAGGGCTCTTGGCTCAAGGTTTGTTTTTCTCTaGTCAGGTTTGTGTGTTGTT +
Preference number: 5 (lower is better)
Translates to: MSLRLSPGVSSVKRALGSRFVFL*SGLCVV
Trigger: AACAACACACAAACCTGACAAGAGAAAAACAAACCT...TGAGCCAAGAGCCCTCTTCACGCTGCTAACTCCAGGGGACAGACGAAGGGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS GCA 90 bp TCTTTGGGAACCTCTGGATGGAGAACTTCTTTATACACCGTTTTCTaGCTCGGCAGCGACAGCATGTTGGCTTTTCATCTCCATCAAGCA +
Preference number: 5 (lower is better)
Translates to: SLGTSGWRTSLYTVF*LGSDSMLAFHLHQA
Trigger: TGCTTGATGGAGATGAAAAGCCAACATGCTGTCGCTGCCGAGGCAGAAAACGGTGTATAAAGAAGTTCTCCATCCAGAGGTTCCCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS TCA 90 bp GACAGCATGTTGGCTTTTCATCTCCATCAAGCACATCCTCTTTGGTaGAGAGCCTCATGCAGTCCATTAATGTCACCTCAGGATAACCTC +
Preference number: 5 (lower is better)
Translates to: DSMLAFHLHQAHPLW*RASCSPLMSPQDNL
Trigger: GAGGTTATCCTGAGGTGACATTAATGGACTGCATGAGGCTCTTCACCAAAGAGGATGTGCTTGATGGAGATGAAAAGCCAACATGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS TCA 90 bp ATTCTCTTAAGTCCAGGTCTCTTAGGGGGAAGTTCACAAATGTTGTaGGCTTGCTGGTTCGGATCCTGGATTCTGAGAACCGCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: ILLSPGLLGGSSQML*ACWFGSWILRTASD
Trigger: ATCTGAAGCGGTTCTCAGAATCCAGGATCCGAACCAGCAAGCTCACAACATTTGTGAACTTCCCCCTAAGAGACCTGGACTTAAGAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS-3UTR CAA 90 bp AAATTGAGCCCACAGGAAAGAACCATACAACTGAGGCAAGATGTCCCCAAATACTCAAGCACATCCTCTTaGGTGAAGAGCCTCATGCAG +
Preference number: 5 (lower is better)
Translates to: KLSPQERTIQLRQDVPKYSSTSS*VKSLMQ
Trigger: CTGCATGAGGCTCTTCACCAAAGAGGATGTGCTTGA...GTATTTGGGGACATCTTGCCTCAGTTGTATGGTTCTTTCCTGTGGGCTCAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS-3UTR CAA 90 bp AAATTGAGCCCACAGGAAAGAACCATACAACTGAGGCAAGATGTCCCCAAATACTCGGCAGCTTCAGGTTaGTTTTTCTCTTGTCAGGTT +
Preference number: 5 (lower is better)
Translates to: KLSPQERTIQLRQDVPKYSAASG*FFSCQV
Trigger: AACCTGACAAGAGAAAAACAAACCTGAAGCTGCCGA...GTATTTGGGGACATCTTGCCTCAGTTGTATGGTTCTTTCCTGTGGGCTCAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS GCA 72 bp CCGAACGCGCGCTCCTCCGCCTCAACCTCCCCGGCGTaGGCCGCCAACAGCCCGGGTCCCGGCTCTCGCGCT +
Preference number: 6 (lower is better)
Translates to: PNARSSASTSPA*AANSPGPGSRA
Trigger: AGCGCGAGAGCCGGGACCCGGGCTGTTGGCGGCGCACGCCGGGGAGGTTGAGGCGGAGGAGCGCGCGTTCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525735.1
CDS TCA 72 bp CCCGGCTGGCGCTGGCGCGGCGCAGTGAGCACCAGCTaGCGAAGAGGGCTCCCCGGCCTCGGCTCCTGCCTG +
Preference number: 6 (lower is better)
Translates to: PGWRWRGAVSTS*RRGLPGLGSCL
Trigger: CAGGCAGGAGCCGAGGCCGGGGAGCCCTCTTCGTCAGCTGGTGCTCACTGCGCCGCGCCAGCGCCAGCCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000455332.6
CDS CCA 72 bp GGGAGCGGGGCCACCACGGGGAAGGGAGAAGGGACGTaGCTCCTGGCGCTACATTCGGGAGGGCGGGCTGGC +
Preference number: 6 (lower is better)
Translates to: GSGATTGKGEGT*LLALHSGGRAG
Trigger: GCCAGCCCGCCCTCCCGAATGTAGCGCCAGGAGCCACGTCCCTTCTCCCTTCCCCGTGGTGGCCCCGCTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS GCA 72 bp CTGTCTGGTAGAGCCCCTGCAGGGTGCAGAGCTCCTTaGGCGTCCGGGCCAGCATGGGGCTGCGGCCCAGGT +
Preference number: 6 (lower is better)
Translates to: LSGRAPAGCRAP*ASGPAWGCGPG
Trigger: ACCTGGGCCGCAGCCCCATGCTGGCCCGGACGCGCAAGGAGCTCTGCACCCTGCAGGGGCTCTACCAGACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS CCA 72 bp GCAGGGTGCAGAGCTCCTTGCGCGTCCGGGCCAGCATaGGGCTGCGGCCCAGGTTCCTGGGGTCTATCCGGT +
Preference number: 6 (lower is better)
Translates to: AGCRAPCASGPA*GCGPGSWGLSG
Trigger: ACCGGATAGACCCCAGGAACCTGGGCCGCAGCCCCATGCTGGCCCGGACGCGCAAGGAGCTCTGCACCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS CCA 72 bp GGGCCACCACGGGGAAGGGAGAAGGGACGTGGCTCCTaGCGCTACATTCGGGAGGGCGGGCTGGCCAGTTCG +
Preference number: 6 (lower is better)
Translates to: GPPRGREKGRGS*RYIREGGLASS
Trigger: CGAACTGGCCAGCCCGCCCTCCCGAATGTAGCGCCAGGAGCCACGTCCCTTCTCCCTTCCCCGTGGTGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS CCA 72 bp GCGTCCGGGCCAGCATGGGGCTGCGGCCCAGGTTCCTaGGGTCTATCCGGTAGCTATCTGAGGTCCGGAGGC +
Preference number: 6 (lower is better)
Translates to: ASGPAWGCGPGS*GLSGSYLRSGG
Trigger: GCCTCCGGACCTCAGATAGCTACCGGATAGACCCCAGGAACCTGGGCCGCAGCCCCATGCTGGCCCGGACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS CCA 72 bp GAGGCCACAGAATGCACTATGGGCAGGAGAGCGGGCTaGGGCCCTGGCCGGAGTCTCGCTGCGCAAGACAGG +
Preference number: 6 (lower is better)
Translates to: EATECTMGRRAG*GPGRSLAAQDR
Trigger: CCTGTCTTGCGCAGCGAGACTCCGGCCAGGGCCCCAGCCCGCTCTCCTGCCCATAGTGCATTCTGTGGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531070.1
CDS GCA 72 bp TGCAGAGCTCCTTGCGCGTCCGGGCCAGCATGGGGCTaGGGCCCAGGTTCCTGGGGTCTATCCGGTAGCTAT +
Preference number: 6 (lower is better)
Translates to: CRAPCASGPAWG*GPGSWGLSGSY
Trigger: ATAGCTACCGGATAGACCCCAGGAACCTGGGCCGCAGCCCCATGCTGGCCCGGACGCGCAAGGAGCTCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS CCA 72 bp AATTCATGCCGTCTCTTCCCGGGGAGCTGGAGCGGCTaGGCCCAGGGGCCTGACCCTTTCCCGTCTCCCACA +
Preference number: 6 (lower is better)
Translates to: NSCRLFPGSWSG*AQGPDPFPSPT
Trigger: TGTGGGAGACGGGAAAGGGTCAGGCCCCTGGGCCCAGCCGCTCCAGCTCCCCGGGAAGAGACGGCATGAATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS CCA 72 bp GACGTGGCTCCTGGCGCTACATTCGGGAGGGCGGGCTaGCCAGTTCGTAGAAGAGCAGGTAGGCGTCGCTGG +
Preference number: 6 (lower is better)
Translates to: DVAPGATFGRAG*PVRRRAGRRRW
Trigger: CCAGCGACGCCTACCTGCTCTTCTACGAACTGGCCAGCCCGCCCTCCCGAATGTAGCGCCAGGAGCCACGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS TCA 72 bp GCGGCCCAGGTTCCTGGGGTCTATCCGGTAGCTATCTaGGGTCCGGAGGCTGGAGAAATCCCGGGCCAGGTC +
Preference number: 6 (lower is better)
Translates to: AAQVPGVYPVAI*GPEAGEIPGQV
Trigger: GACCTGGCCCGGGATTTCTCCAGCCTCCGGACCTCAGATAGCTACCGGATAGACCCCAGGAACCTGGGCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS CCA 72 bp AGGCCACTGCCTAAAGGCCGCTCAGTACCCCGGGTCTaGCTCTCTGCCCGCTTACCACCCCCAGTGATGTCG +
Preference number: 6 (lower is better)
Translates to: RPLPKGRSVPRV*LSARLPPPVMS
Trigger: CGACATCACTGGGGGTGGTAAGCGGGCAGAGAGCCAGACCCGGGGTACTGAGCGGCCTTTAGGCAGTGGCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000527843.1
ENST00000531070.1
CDS TCA 72 bp TGTTGGTCACTCCATAAGGGAATCCGCTGCCCCCGCTaGGGCCACTGCCTAAAGGCCGCTCAGTACCCCGGG +
Preference number: 6 (lower is better)
Translates to: CWSLHKGIRCPR*GHCLKAAQYPG
Trigger: CCCGGGGTACTGAGCGGCCTTTAGGCAGTGGCCTCAGCGGGGGCAGCGGATTCCCTTATGGAGTGACCAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000527843.1
ENST00000531070.1
CDS CCA 72 bp GACTGGGAGCCTCATGGGCTGCCTCTTCTTGGAGTATaGACGAGTCGAACCGGGCACAAGCATGGAGCTGCG +
Preference number: 6 (lower is better)
Translates to: DWEPHGLPLLGV*TSRTGHKHGAA
Trigger: CGCAGCTCCATGCTTGTGCCCGGTTCGACTCGTCCATACTCCAAGAAGAGGCAGCCCATGAGGCTCCCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS CAA 90 bp GCTGGCCAGTTCGTAGAAGAGCAGGTAGGCGTCGCTGGTGCGCACTaGGCTGGAGGACATGGGAGTGACGCTGGAGTCGTTGAAAGTGTG +
Preference number: 6 (lower is better)
Translates to: AGQFVEEQVGVAGAH*AGGHGSDAGVVESV
Trigger: CACACTTTCAACGACTCCAGCGTCACTCCCATGTCCTCCAGCCAAGTGCGCACCAGCGACGCCTACCTGCTCTTCTACGAACTGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS CCA 72 bp CATAGGAGGACGGGGTGTAGGCACCATAGCCCGACTTaGCATAGTGGGCATCTGTGTAGCGGGCCGATTCTG +
Preference number: 6 (lower is better)
Translates to: HRRTGCRHHSPT*HSGHLCSGPIL
Trigger: CAGAATCGGCCCGCTACACAGATGCCCACTATGCCAAGTCGGGCTATGGTGCCTACACCCCGTCCTCCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000527843.1
ENST00000531070.1
CDS CCA 72 bp TGGGGTCTATCCGGTAGCTATCTGAGGTCCGGAGGCTaGAGAAATCCCGGGCCAGGTCTGATTGGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: WGLSGSYLRSGG*RNPGPGLIGCP
Trigger: TGGACAGCCAATCAGACCTGGCCCGGGATTTCTCCAGCCTCCGGACCTCAGATAGCTACCGGATAGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260187.7
ENST00000531070.1
CDS CCA 72 bp AGTTCTCCAGGTAGTCGACCAGGTATTCAGGGCAGCTaGCTGTCTGGTAGAGCCCCTGCAGGGTGCAGAGCT +
Preference number: 6 (lower is better)
Translates to: SSPGSRPGIQGS*LSGRAPAGCRA
Trigger: AGCTCTGCACCCTGCAGGGGCTCTACCAGACAGCCAGCTGCCCTGAATACCTGGTCGACTACCTGGAGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS GCA 72 bp TTGCAAACTCTTCCACGAGGGCTGTGTGTGCATTGCTaGCGTGGTGCAGGTCCCGCATGTAGAGCCTCTGGA +
Preference number: 6 (lower is better)
Translates to: LQTLPRGLCVHC*RGAGPACRASG
Trigger: TCCAGAGGCTCTACATGCGGGACCTGCACCACGGCAGCAATGCACACACAGCCCTCGTGGAAGAGTTTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525189.5
ENST00000525735.1
ENST00000532613.1
CDS GCA 72 bp CCTGCTCCTACTGCCACCCACCTGAGAGGACATGTCTaGAAGGCCCTTACTTATAGCCAACAAAGCGCGGTG +
Preference number: 6 (lower is better)
Translates to: PAPTATHLRGHV*KALTYSQQSAV
Trigger: CACCGCGCTTTGTTGGCTATAAGTAAGGGCCTTGCAGACATGTCCTCTCAGGTGGGTGGCAGTAGGAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525189.5
CDS CCA 72 bp CAAGTTTCTCCTTCTCCAGTAAGGAGGCAGCCAGATTaGCCCCATAGGAGGACGGGGTGTAGGCACCATAGC +
Preference number: 6 (lower is better)
Translates to: QVSPSPVRRQPD*PHRRTGCRHHS
Trigger: GCTATGGTGCCTACACCCCGTCCTCCTATGGGGCCAATCTGGCTGCCTCCTTACTGGAGAAGGAGAAACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000527843.1
ENST00000531070.1
CDS CCA 72 bp CACGTGTTCCCAAGGTTTCGAAGACCAGCCAGACCCTaGGCACTCTTAGAATTCATGCCGTCTCTTCCCGGG +
Preference number: 6 (lower is better)
Translates to: HVFPRFRRPARP*ALLEFMPSLPG
Trigger: CCCGGGAAGAGACGGCATGAATTCTAAGAGTGCCCAGGGTCTGGCTGGTCTTCGAAACCTTGGGAACACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260187.7
CDS CCA 72 bp CTGGACTGCGACAGTAGGCTGTATAGTGGCCACCCATaGTGGTTCCGGAGTGATTGGACACAGCGTACAGGT +
Preference number: 6 (lower is better)
Translates to: LDCDSRLYSGHP*WFRSDWTQRTG
Trigger: ACCTGTACGCTGTGTCCAATCACTCCGGAACCACCATGGGTGGCCACTATACAGCCTACTGTCGCAGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS CCA 72 bp GACTGCGACAGTAGGCTGTATAGTGGCCACCCATGGTaGTTCCGGAGTGATTGGACACAGCGTACAGGTTGT +
Preference number: 6 (lower is better)
Translates to: DCDSRLYSGHPW*FRSDWTQRTGC
Trigger: ACAACCTGTACGCTGTGTCCAATCACTCCGGAACCACCATGGGTGGCCACTATACAGCCTACTGTCGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS CCA 72 bp GCTGGAGTCGTTGAAAGTGTGCCATTCTCCTGTCCCTaGACTGCGACAGTAGGCTGTATAGTGGCCACCCAT +
Preference number: 6 (lower is better)
Translates to: AGVVESVPFSCP*TATVGCIVATH
Trigger: ATGGGTGGCCACTATACAGCCTACTGTCGCAGTCCAGGGACAGGAGAATGGCACACTTTCAACGACTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS CCA 72 bp CTGGGCACTCTTAGAATTCTGCCTCTTCTTGGAGTATaGACGAGTCGAACCGGGCACAAGCATGGAGCTGCG +
Preference number: 6 (lower is better)
Translates to: LGTLRILPLLGV*TSRTGHKHGAA
Trigger: CGCAGCTCCATGCTTGTGCCCGGTTCGACTCGTCCATACTCCAAGAAGAGGCAGAATTCTAAGAGTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455332.6
CDS TCA 72 bp CAACAAAGCGCGGTGCGTATCTCTGGATCTGGGTCTTaGACTCAGATGGGCTCACCACATCATTGGGGGATG +
Preference number: 6 (lower is better)
Translates to: QQSAVRISGSGS*TQMGSPHHWGM
Trigger: CATCCCCCAATGATGTGGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGAGATACGCACCGCGCTTTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525189.5
ENST00000525735.1
ENST00000532613.1
CDS TCA 72 bp TGTCACCTCAGGATAACCTCGCTTAGCAATGGGCAGTaGGAGGTCCCAGAAGGGGTCGAAGACCGTAGAACA +
Preference number: 6 (lower is better)
Translates to: CHLRITSLSNGQ*EVPEGVEDRRT
Trigger: TGTTCTACGGTCTTCGACCCCTTCTGGGACCTCTCACTGCCCATTGCTAAGCGAGGTTATCCTGAGGTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525189.5
ENST00000525735.1
CDS TCA 72 bp TCTTGTCCTAAGAACCTGCTCCTACTGCCACCCACCTaGGAGGACATGTCTGCAAGGCCCTTACTTATAGCC +
Preference number: 6 (lower is better)
Translates to: SCPKNLLLLPPT*EDMSARPLLIA
Trigger: GGCTATAAGTAAGGGCCTTGCAGACATGTCCTCTCAGGTGGGTGGCAGTAGGAGCAGGTTCTTAGGACAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525189.5
CDS CCA 72 bp CTGGTTCGGATCCTGGATTCTGAGAACCGCTTCAGATaGAGCACCAAGATCTTTGGGAACCTCTGGATGGAG +
Preference number: 6 (lower is better)
Translates to: LVRILDSENRFR*STKIFGNLWME
Trigger: CTCCATCCAGAGGTTCCCAAAGATCTTGGTGCTCCATCTGAAGCGGTTCTCAGAATCCAGGATCCGAACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS CCA 72 bp CTGTATAGTGGCCACCCATGGTGGTTCCGGAGTGATTaGACACAGCGTACAGGTTGTAAACAGCATGGTTGG +
Preference number: 6 (lower is better)
Translates to: LYSGHPWWFRSD*TQRTGCKQHGW
Trigger: CCAACCATGCTGTTTACAACCTGTACGCTGTGTCCAATCACTCCGGAACCACCATGGGTGGCCACTATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS CCA 72 bp CACGTGTTCCCAAGGTTTCGAAGACCAGCCAGACCCTaGGCACTCTTAGAATTCTTGGCTTTGTTGAGCAGG +
Preference number: 6 (lower is better)
Translates to: HVFPRFRRPARP*ALLEFLALLSR
Trigger: CCTGCTCAACAAAGCCAAGAATTCTAAGAGTGCCCAGGGTCTGGCTGGTCTTCGAAACCTTGGGAACACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525735.1
ENST00000532613.1
CDS GCA 72 bp CTGAGCATCCTGCTGATTATAGCCAACAAAGCGCGGTaGGTATCTCTGGATCTGGGTCTTGAACTCAGATGG +
Preference number: 6 (lower is better)
Translates to: LSILLIIANKAR*VSLDLGLELRW
Trigger: CCATCTGAGTTCAAGACCCAGATCCAGAGATACGCACCGCGCTTTGTTGGCTATAATCAGCAGGATGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
ENST00000532613.1
CDS GCA 72 bp TCTGCAAGGCCCTTACTTATAGCCAACAAAGCGCGGTaGGTATCTCTGGATCTGGGTCTTGAACTCAGATGG +
Preference number: 6 (lower is better)
Translates to: SARPLLIANKAR*VSLDLGLELRW
Trigger: CCATCTGAGTTCAAGACCCAGATCCAGAGATACGCACCGCGCTTTGTTGGCTATAAGTAAGGGCCTTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525189.5
CDS CCA 72 bp CACGTGTTCCCAAGGTTTCGAAGACCAGCCAGACCCTaGGCACTCTTAGAATTCTGCCTCTTCTTGGAGTAT +
Preference number: 6 (lower is better)
Translates to: HVFPRFRRPARP*ALLEFCLFLEY
Trigger: ATACTCCAAGAAGAGGCAGAATTCTAAGAGTGCCCAGGGTCTGGCTGGTCTTCGAAACCTTGGGAACACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455332.6
CDS CAA 90 bp CTTAAGTCCAGGTCTCTTAGGGGGAAGTTCACAAATGTTGTGAGCTaGCTGGTTCGGATCCTGGATTCTGAGAACCGCTTCAGATGGAGC +
Preference number: 6 (lower is better)
Translates to: LKSRSLRGKFTNVVS*LVRILDSENRFRWS
Trigger: GCTCCATCTGAAGCGGTTCTCAGAATCCAGGATCCGAACCAGCAAGCTCACAACATTTGTGAACTTCCCCCTAAGAGACCTGGACTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS TCA 72 bp AGTCCAGGTCTCTTAGGGGGAAGTTCACAAATGTTGTaGGCTTGCTGGTTCGGATCCTGGATTCTGAGAACC +
Preference number: 6 (lower is better)
Translates to: SPGLLGGSSQML*ACWFGSWILRT
Trigger: GGTTCTCAGAATCCAGGATCCGAACCAGCAAGCTCACAACATTTGTGAACTTCCCCCTAAGAGACCTGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS CAA 72 bp AGGTCTCTTAGGGGGAAGTTCACAAATGTTGTGAGCTaGCTGGTTCGGATCCTGGATTCTGAGAACCGCTTC +
Preference number: 6 (lower is better)
Translates to: RSLRGKFTNVVS*LVRILDSENRF
Trigger: GAAGCGGTTCTCAGAATCCAGGATCCGAACCAGCAAGCTCACAACATTTGTGAACTTCCCCCTAAGAGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS TCA 72 bp AAATGTTGTGAGCTTGCTGGTTCGGATCCTGGATTCTaGGAACCGCTTCAGATGGAGCACCAAGATCTTTGG +
Preference number: 6 (lower is better)
Translates to: KCCELAGSDPGF*EPLQMEHQDLW
Trigger: CCAAAGATCTTGGTGCTCCATCTGAAGCGGTTCTCAGAATCCAGGATCCGAACCAGCAAGCTCACAACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS GCA 72 bp ACCTCTGGATGGAGAACTTCTTTATACACCGTTTTCTaGCTCGGCAGCGACAGCATGTTGGCTTTTCATCTC +
Preference number: 6 (lower is better)
Translates to: TSGWRTSLYTVF*LGSDSMLAFHL
Trigger: GAGATGAAAAGCCAACATGCTGTCGCTGCCGAGGCAGAAAACGGTGTATAAAGAAGTTCTCCATCCAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS CCA 72 bp TCAGATGGAGCACCAAGATCTTTGGGAACCTCTGGATaGAGAACTTCTTTATACACCGTTTTCTGCCTCGGC +
Preference number: 6 (lower is better)
Translates to: SDGAPRSLGTSG*RTSLYTVFCLG
Trigger: GCCGAGGCAGAAAACGGTGTATAAAGAAGTTCTCCATCCAGAGGTTCCCAAAGATCTTGGTGCTCCATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS CCA 72 bp ATGGGCTCACCACATCATTGGGGGATGAAGTCCATATaGTCTGAATTAGTTTTGCAAACTCTTCCACGAGGG +
Preference number: 6 (lower is better)
Translates to: MGSPHHWGMKSI*SELVLQTLPRG
Trigger: CCCTCGTGGAAGAGTTTGCAAAACTAATTCAGACCATATGGACTTCATCCCCCAATGATGTGGTGAGCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525189.5
ENST00000525735.1
ENST00000532613.1
CDS CCA 72 bp CGCTTCAGATGGAGCACCAAGATCTTTGGGAACCTCTaGATGGAGAACTTCTTTATACACCGTTTTCTGCCT +
Preference number: 6 (lower is better)
Translates to: RFRWSTKIFGNL*MENFFIHRFLP
Trigger: AGGCAGAAAACGGTGTATAAAGAAGTTCTCCATCCAGAGGTTCCCAAAGATCTTGGTGCTCCATCTGAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS TCA 72 bp TTGGCTTTTCATCTCCATCAAGCACATCCTCTTTGGTaGAGAGCCTCATGCAGTCCATTAATGTCACCTCAG +
Preference number: 6 (lower is better)
Translates to: LAFHLHQAHPLW*RASCSPLMSPQ
Trigger: CTGAGGTGACATTAATGGACTGCATGAGGCTCTTCACCAAAGAGGATGTGCTTGATGGAGATGAAAAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1
CDS CAA 72 bp CATGTTGGCTTTTCATCTCCATCAAGCACATCCTCTTaGGTGAAGAGCCTCATGCAGTCCATTAATGTCACC +
Preference number: 6 (lower is better)
Translates to: HVGFSSPSSTSS*VKSLMQSINVT
Trigger: GGTGACATTAATGGACTGCATGAGGCTCTTCACCAAAGAGGATGTGCTTGATGGAGATGAAAAGCCAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260187.7
ENST00000455332.6
ENST00000525735.1