Pregenerated sensors for USP16 (Homo sapiens)
Ensembl gene IDs: ENSG00000156256Ensembl transcript IDs: ENST00000334352.8, ENST00000399973.1, ENST00000399975.7, ENST00000399976.7, ENST00000474835.5, ENST00000485067.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTCATGGGCCTTTGGGCTGGGCAGCCAGCTCCGTCTTCCTCCTGGTaGCGAATTGAGAGCGACGGAGTCGAAGCCAGAGTGACCCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: LMGLWAGQPAPSSSW*RIESDGVEARVTPG Trigger: TCCAGGGGTCACTCTGGCTTCGACTCCGTCGCTCTCAATTCGTCACCAGGAGGAAGACGGAGCTGGCTGCCCAGCCCAAAGGCCCATGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000334352.8 ENST00000399973.1 ENST00000399975.7 ENST00000474835.5 |
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| CDS CCA 90 bp | ACACTCTATCTCCACGGCGACAGAGCCCATAACTGCATCCCCTCATaGGCCTTTGGGCTGGGCAGCCAGCTCCGTCTTCCTCCTGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: TLYLHGDRAHNCIPS*AFGLGSQLRLPPGD Trigger: GTCACCAGGAGGAAGACGGAGCTGGCTGCCCAGCCCAAAGGCCCATGAGGGGATGCAGTTATGGGCTCTGTCGCCGTGGAGATAGAGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399973.1 |
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| CDS GCA 90 bp | GGCAACAAAGCGACACTCTATCTCCACGGCGACAGAGCCCATAACTaGATCCCCTCATGGGCCTTTGGGCTGGGCAGCCAGCTCCGTCTT | + |
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Preference number: 5 (lower is better) Translates to: GNKATLYLHGDRAHN*IPSWAFGLGSQLRL Trigger: AAGACGGAGCTGGCTGCCCAGCCCAAAGGCCCATGAGGGGATGCAGTTATGGGCTCTGTCGCCGTGGAGATAGAGTGTCGCTTTGTTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399973.1 |
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| CDS TCA 90 bp | CCTTTGGGCTGGGCAGCCAGCTCCGTCTTCCTCCTGGTGACGAATTaGGAGCGACGGAGTCGAAGCCAGAGTGACCCCTGGAAAGCAATA | + |
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Preference number: 5 (lower is better) Translates to: PLGWAASSVFLLVTN*ERRSRSQSDPWKAI Trigger: TATTGCTTTCCAGGGGTCACTCTGGCTTCGACTCCGTCGCTCTCAATTCGTCACCAGGAGGAAGACGGAGCTGGCTGCCCAGCCCAAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399975.7 |
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| CDS CCA 90 bp | AAAATAACAATCCACGGCGACAGAGCCCATAACTGCATCCCCTCATaGGCCTTTGGGCTGGGCAGCCAGCTCCGTCTTCCTCCTGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: KITIHGDRAHNCIPS*AFGLGSQLRLPPGD Trigger: GTCACCAGGAGGAAGACGGAGCTGGCTGCCCAGCCCAAAGGCCCATGAGGGGATGCAGTTATGGGCTCTGTCGCCGTGGATTGTTATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000399975.7 ENST00000399976.7 ENST00000474835.5 |
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| CDS GCA 90 bp | CATAAGAATGAAGCAAACAAGTTCCACGGCGACAGAGCCCATAACTaGATCCCCTCATGGGCCTTTGGGCTGGGCAGCCAGCTCCGTCTT | + |
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Preference number: 5 (lower is better) Translates to: HKNEANKFHGDRAHN*IPSWAFGLGSQLRL Trigger: AAGACGGAGCTGGCTGCCCAGCCCAAAGGCCCATGAGGGGATGCAGTTATGGGCTCTGTCGCCGTGGAACTTGTTTGCTTCATTCTTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334352.8 |
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| CDS GCA 90 bp | ATTCAACCTCTCAAGTGTTCACTTTCCCCACGAGAGAGTGCACGCTaGTTATTCTTTCAGGACTCTATATGCCATAGGGCTGGCAACAGG | + |
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Preference number: 5 (lower is better) Translates to: IQPLKCSLSPRESAR*LFFQDSICHRAGNR Trigger: CCTGTTGCCAGCCCTATGGCATATAGAGTCCTGAAAGAATAAGCAGCGTGCACTCTCTCGTGGGGAAAGTGAACACTTGAGAGGTTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS GCA 90 bp | ATCACCGTGAAGAACAAGATTAGAGAGATGACTATTTGCGGTTCTTaGCTTGGCATAGGCAGTGTAATGCCCCGACCTCATAGTACCACT | + |
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Preference number: 5 (lower is better) Translates to: ITVKNKIREMTICGS*LGIGSVMPRPHSTT Trigger: AGTGGTACTATGAGGTCGGGGCATTACACTGCCTATGCCAAGGCAAGAACCGCAAATAGTCATCTCTCTAATCTTGTTCTTCACGGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000334352.8 ENST00000399975.7 ENST00000399976.7 ENST00000474835.5 ENST00000485067.1 |
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| CDS CCA 90 bp | ACTCCAGTTGTCCAAACTAAGAACCAGACAGTGAGGTTCAGATCTTaGCGTCAGATAGTGCTTCAAGGCATGCTGCTCCTGAGAATTTCT | + |
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Preference number: 5 (lower is better) Translates to: TPVVQTKNQTVRFRS*RQIVLQGMLLLRIS Trigger: AGAAATTCTCAGGAGCAGCATGCCTTGAAGCACTATCTGACGCCAAGATCTGAACCTCACTGTCTGGTTCTTAGTTTGGACAACTGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000334352.8 ENST00000399975.7 ENST00000399976.7 ENST00000474835.5 |
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| CDS CCA 90 bp | GGTGTCACAACCCCCTTTTTGGTCTCTTGCATCTCATTAAGAAACTaGCTCATGGCTAAAGTAAGAGGGCCTGGAGGCTCAAGGTTTATT | + |
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Preference number: 5 (lower is better) Translates to: GVTTPFLVSCISLRN*LMAKVRGPGGSRFI Trigger: AATAAACCTTGAGCCTCCAGGCCCTCTTACTTTAGCCATGAGCCAGTTTCTTAATGAGATGCAAGAGACCAAAAAGGGGGTTGTGACACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000334352.8 ENST00000399975.7 ENST00000399976.7 ENST00000474835.5 |
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| CDS CCA 90 bp | AGGACTCTATATGCCATAGGGCTGGCAACAGGAACAGGCATTCTCTaGGCCAGGAGCCACTTTTCAGACAACTATTTATGTTCTCATGTA | + |
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Preference number: 5 (lower is better) Translates to: RTLYAIGLATGTGIL*ARSHFSDNYLCSHV Trigger: TACATGAGAACATAAATAGTTGTCTGAAAAGTGGCTCCTGGCCCAGAGAATGCCTGTTCCTGTTGCCAGCCCTATGGCATATAGAGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS GCA 90 bp | TTGTGGAATATCACCGTGAAGAACAAGATTAGAGAGATGACTATTTaGGGTTCTTGCCTTGGCATAGGCAGTGTAATGCCCCGACCTCAT | + |
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Preference number: 5 (lower is better) Translates to: LWNITVKNKIREMTI*GSCLGIGSVMPRPH Trigger: ATGAGGTCGGGGCATTACACTGCCTATGCCAAGGCAAGAACCGCAAATAGTCATCTCTCTAATCTTGTTCTTCACGGTGATATTCCACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000334352.8 ENST00000399975.7 ENST00000399976.7 ENST00000474835.5 ENST00000485067.1 |
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| CDS TCA 90 bp | TCTTTCCCATCCTTATTCTTGATAGTGAATAAGCCTCATGAGAGCTaGTGGTTTCTTAAGGGGGAGTTTCCCTCCACAAGCTCTTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: SFPSLFLIVNKPHES*WFLKGEFPSTSSCF Trigger: AAAGCAAGAGCTTGTGGAGGGAAACTCCCCCTTAAGAAACCATCAGCTCTCATGAGGCTTATTCACTATCAAGAATAAGGATGGGAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS GCA 90 bp | GCCTCCCCAGCCATGTGGAACTGTAAACCTCTTTCTTTTGTAAATTaGCCAGTCTTGCCCAGTATATCTTGTCCAGTATATCTTTATCAG | + |
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Preference number: 5 (lower is better) Translates to: ASPAMWNCKPLSFVN*PVLPSISCPVYLYQ Trigger: CTGATAAAGATATACTGGACAAGATATACTGGGCAAGACTGGGCAATTTACAAAAGAAAGAGGTTTACAGTTCCACATGGCTGGGGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS CCA 90 bp | CCTGGTAGAAAAGCTGTAAGCCACAGGCCACTTGATGCAGTTACCTaGCTCAGATACCAAATAACTGAATTCAACTTGCCAGTTTCTTTA | + |
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Preference number: 5 (lower is better) Translates to: PGRKAVSHRPLDAVT*LRYQITEFNLPVSL Trigger: TAAAGAAACTGGCAAGTTGAATTCAGTTATTTGGTATCTGAGCCAGGTAACTGCATCAAGTGGCCTGTGGCTTACAGCTTTTCTACCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS TCA 90 bp | GCTGGCTTGTTTTCTGACATAATCAACCACTTGACCCAACTGGTTTaGACTACAATACTGGACCTCATTATCACATACGTAACACCATAC | + |
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Preference number: 5 (lower is better) Translates to: AGLFSDIINHLTQLV*TTILDLIITYVTPY Trigger: GTATGGTGTTACGTATGTGATAATGAGGTCCAGTATTGTAGTTCAAACCAGTTGGGTCAAGTGGTTGATTATGTCAGAAAACAAGCCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000334352.8 ENST00000399975.7 ENST00000399976.7 ENST00000474835.5 |
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| CDS TCA 90 bp | AGTACTTTAGTTGTAGGCACAGCTTGCACATGTGTGTCGCTGATGTaGAACCACTGCCCTTTTGATTCCATTTCAAAATCTTGTGGAATA | + |
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Preference number: 5 (lower is better) Translates to: STLVVGTACTCVSLM*NHCPFDSISKSCGI Trigger: TATTCCACAAGATTTTGAAATGGAATCAAAAGGGCAGTGGTTTCACATCAGCGACACACATGTGCAAGCTGTGCCTACAACTAAAGTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000334352.8 ENST00000399975.7 ENST00000399976.7 ENST00000474835.5 ENST00000485067.1 |
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| CDS CCA 90 bp | CATCGATTGGAACAGTTTTTCCCTTTGTCCGTTTCTTTCCCATGTTaGCACTTTATGGATTACTTACTGACACAAAATAACAATCCACGG | + |
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Preference number: 5 (lower is better) Translates to: HRLEQFFPLSVSFPC*HFMDYLLTQNNNPR Trigger: CCGTGGATTGTTATTTTGTGTCAGTAAGTAATCCATAAAGTGCCAACATGGGAAAGAAACGGACAAAGGGAAAAACTGTTCCAATCGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000399975.7 ENST00000399976.7 ENST00000474835.5 |
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| CDS CCA 90 bp | CATCGATTGGAACAGTTTTTCCCTTTGTCCGTTTCTTTCCCATGTTaGCACTTTATGGATTACTTACTGACACAAAATAACAATCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: HRLEQFFPLSVSFPC*HFMDYLLTQNNNLR Trigger: CCTCAGATTGTTATTTTGTGTCAGTAAGTAATCCATAAAGTGCCAACATGGGAAAGAAACGGACAAAGGGAAAAACTGTTCCAATCGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334352.8 |
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| CDS CCA 90 bp | CATCGATTGGAACAGTTTTTCCCTTTGTCCGTTTCTTTCCCATGTTaGCACTTTATGGATTACTTACTGACACAAAATAACAATGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: HRLEQFFPLSVSFPC*HFMDYLLTQNNNAC Trigger: ACAGGCATTGTTATTTTGTGTCAGTAAGTAATCCATAAAGTGCCAACATGGGAAAGAAACGGACAAAGGGAAAAACTGTTCCAATCGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399973.1 |
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| CDS TCA 90 bp | CCCAGTATATCTTGTCCAGTATATCTTTATCAGCAGCATGGAAACTaGCATAATATAATTCCCATATGCAGTCTAGACCATTGCTATTCA | + |
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Preference number: 5 (lower is better) Translates to: PSISCPVYLYQQHGN*HNIIPICSLDHCYS Trigger: TGAATAGCAATGGTCTAGACTGCATATGGGAATTATATTATGTCAGTTTCCATGCTGCTGATAAAGATATACTGGACAAGATATACTGGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS CCA 90 bp | AGTAGAATCCAAAAGTTAGTTCTAGTTCCATTTACACAGATGTCATaGGCAAGACAAGTTTACACTATGCAAAGGGTCTTTAACCATTAC | + |
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Preference number: 5 (lower is better) Translates to: SRIQKLVLVPFTQMS*ARQVYTMQRVFNHY Trigger: GTAATGGTTAAAGACCCTTTGCATAGTGTAAACTTGTCTTGCCCATGACATCTGTGTAAATGGAACTAGAACTAACTTTTGGATTCTACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS CAA 72 bp | GCGACAGAGCCCATAACTGCATCCCCTCATGGGCCTTaGGGCTGGGCAGCCAGCTCCGTCTTCCTCCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: ATEPITASPHGP*GWAASSVFLLV Trigger: CACCAGGAGGAAGACGGAGCTGGCTGCCCAGCCCAAAGGCCCATGAGGGGATGCAGTTATGGGCTCTGTCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000334352.8 ENST00000399973.1 ENST00000399975.7 ENST00000399976.7 ENST00000474835.5 |
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| CDS TCA 72 bp | TGGGCAGCCAGCTCCGTCTTCCTCCTGGTGACGAATTaGGAGCGACGGAGTCGAAGCCAGAGTGACCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: WAASSVFLLVTN*ERRSRSQSDPW Trigger: CCAGGGGTCACTCTGGCTTCGACTCCGTCGCTCTCAATTCGTCACCAGGAGGAAGACGGAGCTGGCTGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000334352.8 ENST00000399973.1 ENST00000399975.7 ENST00000474835.5 |
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| CDS TCA 72 bp | CTTTGGGCTGGGCAGCCAGCTCCGTCTTCCTCCTGGTaGCGAATTGAGAGCGACGGAGTCGAAGCCAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: LWAGQPAPSSSW*RIESDGVEARV Trigger: CACTCTGGCTTCGACTCCGTCGCTCTCAATTCGTCACCAGGAGGAAGACGGAGCTGGCTGCCCAGCCCAAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000334352.8 ENST00000399973.1 ENST00000399975.7 ENST00000474835.5 |
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| CDS TCA 72 bp | GGTGACGAATTGAGAGCGACGGAGTCGAAGCCAGAGTaGCCCCTGGAAAGCAATAACTTCCGGAACGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: GDELRATESKPE*PLESNNFRNAA Trigger: TGCCGCGTTCCGGAAGTTATTGCTTTCCAGGGGTCACTCTGGCTTCGACTCCGTCGCTCTCAATTCGTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399975.7 |
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| CDS CAA 90 bp | GCTGATGGTTTCTTAAGGGGGAGTTTCCCTCCACAAGCTCTTGCTTaGCCCGCTGCCATCCATGTAAGATGTGACGTGCTCCTCCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: ADGFLRGSFPPQALA*PAAIHVRCDVLLLA Trigger: GGCAAGGAGGAGCACGTCACATCTTACATGGATGGCAGCGGGCAAAGCAAGAGCTTGTGGAGGGAAACTCCCCCTTAAGAAACCATCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS TCA 72 bp | CCACATGTCATGGGAGGGTACCCGTTGGGACGCAACTaGATCATGGGAGCAGGTCTTTCCCATCCTTATTCT | + |
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Preference number: 6 (lower is better) Translates to: PHVMGGYPLGRN*IMGAGLSHPYS Trigger: AGAATAAGGATGGGAAAGACCTGCTCCCATGATTCAGTTGCGTCCCAACGGGTACCCTCCCATGACATGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS CAA 72 bp | TTCTTAAGGGGGAGTTTCCCTCCACAAGCTCTTGCTTaGCCCGCTGCCATCCATGTAAGATGTGACGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: FLRGSFPPQALA*PAAIHVRCDVL Trigger: GAGCACGTCACATCTTACATGGATGGCAGCGGGCAAAGCAAGAGCTTGTGGAGGGAAACTCCCCCTTAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS CCA 72 bp | GTCCAAACTAAGAACCAGACAGTGAGGTTCAGATCTTaGCGTCAGATAGTGCTTCAAGGCATGCTGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: VQTKNQTVRFRS*RQIVLQGMLLL Trigger: CAGGAGCAGCATGCCTTGAAGCACTATCTGACGCCAAGATCTGAACCTCACTGTCTGGTTCTTAGTTTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000334352.8 ENST00000399975.7 ENST00000399976.7 ENST00000474835.5 |
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| CDS CCA 72 bp | TCATGGGAGGGTACCCGTTGGGACGCAACTGAATCATaGGAGCAGGTCTTTCCCATCCTTATTCTTGATAGT | + |
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Preference number: 6 (lower is better) Translates to: SWEGTRWDATES*EQVFPILILDS Trigger: ACTATCAAGAATAAGGATGGGAAAGACCTGCTCCCATGATTCAGTTGCGTCCCAACGGGTACCCTCCCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS CCA 72 bp | TATGCCATAGGGCTGGCAACAGGAACAGGCATTCTCTaGGCCAGGAGCCACTTTTCAGACAACTATTTATGT | + |
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Preference number: 6 (lower is better) Translates to: YAIGLATGTGIL*ARSHFSDNYLC Trigger: ACATAAATAGTTGTCTGAAAAGTGGCTCCTGGCCCAGAGAATGCCTGTTCCTGTTGCCAGCCCTATGGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS GCA 72 bp | AAGAACAAGATTAGAGAGATGACTATTTGCGGTTCTTaGCTTGGCATAGGCAGTGTAATGCCCCGACCTCAT | + |
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Preference number: 6 (lower is better) Translates to: KNKIREMTICGS*LGIGSVMPRPH Trigger: ATGAGGTCGGGGCATTACACTGCCTATGCCAAGGCAAGAACCGCAAATAGTCATCTCTCTAATCTTGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000334352.8 ENST00000399975.7 ENST00000399976.7 ENST00000474835.5 ENST00000485067.1 |
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| CDS GCA 72 bp | ATCACCGTGAAGAACAAGATTAGAGAGATGACTATTTaGGGTTCTTGCCTTGGCATAGGCAGTGTAATGCCC | + |
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Preference number: 6 (lower is better) Translates to: ITVKNKIREMTI*GSCLGIGSVMP Trigger: GGGCATTACACTGCCTATGCCAAGGCAAGAACCGCAAATAGTCATCTCTCTAATCTTGTTCTTCACGGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000334352.8 ENST00000399975.7 ENST00000399976.7 ENST00000474835.5 ENST00000485067.1 |
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| CDS CCA 72 bp | TCCCATATGCAGTCTAGACCATTGCTATTCAAAATGTaGTCCATGAACAGCCAGCATCAGCATCACCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: SHMQSRPLLFKM*SMNSQHQHHLR Trigger: TCTCAGGTGATGCTGATGCTGGCTGTTCATGGACCACATTTTGAATAGCAATGGTCTAGACTGCATATGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS TCA 72 bp | TCCTTATTCTTGATAGTGAATAAGCCTCATGAGAGCTaGTGGTTTCTTAAGGGGGAGTTTCCCTCCACAAGC | + |
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Preference number: 6 (lower is better) Translates to: SLFLIVNKPHES*WFLKGEFPSTS Trigger: GCTTGTGGAGGGAAACTCCCCCTTAAGAAACCATCAGCTCTCATGAGGCTTATTCACTATCAAGAATAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS TCA 72 bp | ACCCCTTACATCTTTAAATGTCCCCAAGGGAGTTGGTaGGAAGCACATTCAACCTCTCAAGTGTTCACTTTC | + |
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Preference number: 6 (lower is better) Translates to: TPYIFKCPQGSW*EAHSTSQVFTF Trigger: GAAAGTGAACACTTGAGAGGTTGAATGTGCTTCTCACCAACTCCCTTGGGGACATTTAAAGATGTAAGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS CAA 72 bp | ATCTTTCTCTGCTGGCTTTGGAGTTGTAATGCTGGCTaGTTTTCTGACATAATCAACCACTTGACCCAACTG | + |
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Preference number: 6 (lower is better) Translates to: IFLCWLWSCNAG*FSDIINHLTQL Trigger: CAGTTGGGTCAAGTGGTTGATTATGTCAGAAAACAAGCCAGCATTACAACTCCAAAGCCAGCAGAGAAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000334352.8 ENST00000399976.7 ENST00000474835.5 |
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| CDS CAA 90 bp | GCCATGTGGAACTGTAAACCTCTTTCTTTTGTAAATTGCCCAGTCTaGCCCAGTATATCTTGTCCAGTATATCTTTATCAGCAGCATGGA | + |
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Preference number: 6 (lower is better) Translates to: AMWNCKPLSFVNCPV*PSISCPVYLYQQHG Trigger: TCCATGCTGCTGATAAAGATATACTGGACAAGATATACTGGGCAAGACTGGGCAATTTACAAAAGAAAGAGGTTTACAGTTCCACATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS GCA 72 bp | TTACACAGATGTCATGGGCAAGACAAGTTTACACTATaGAAAGGGTCTTTAACCATTACTTTGAGAGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LHRCHGQDKFTL*KGSLTITLRVQ Trigger: CTGCACTCTCAAAGTAATGGTTAAAGACCCTTTGCATAGTGTAAACTTGTCTTGCCCATGACATCTGTGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS CAA 72 bp | ATTATCTTTCTCTGGCTTTGGAGTTGTAATGCTGGCTaGTTTTCTGACATAATCAACCACTTGACCCAACTG | + |
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Preference number: 6 (lower is better) Translates to: IIFLWLWSCNAG*FSDIINHLTQL Trigger: CAGTTGGGTCAAGTGGTTGATTATGTCAGAAAACAAGCCAGCATTACAACTCCAAAGCCAGAGAAAGATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399975.7 |
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| CDS CAA 90 bp | GGGCAAGACAAGTTTACACTATGCAAAGGGTCTTTAACCATTACTTaGAGAGTGCAGAAATCATTCATGAGTCTACTCTTTTCTCCATAC | + |
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Preference number: 6 (lower is better) Translates to: GQDKFTLCKGSLTIT*RVQKSFMSLLFSPY Trigger: GTATGGAGAAAAGAGTAGACTCATGAATGATTTCTGCACTCTCAAAGTAATGGTTAAAGACCCTTTGCATAGTGTAAACTTGTCTTGCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS CAA 72 bp | TTCTTTTGTAAATTGCCCAGTCTTGCCCAGTATATCTaGTCCAGTATATCTTTATCAGCAGCATGGAAACTG | + |
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Preference number: 6 (lower is better) Translates to: FFCKLPSLAQYI*SSISLSAAWKL Trigger: CAGTTTCCATGCTGCTGATAAAGATATACTGGACAAGATATACTGGGCAAGACTGGGCAATTTACAAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS TCA 72 bp | TTTTCTGACATAATCAACCACTTGACCCAACTGGTTTaGACTACAATACTGGACCTCATTATCACATACGTA | + |
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Preference number: 6 (lower is better) Translates to: FSDIINHLTQLV*TTILDLIITYV Trigger: TACGTATGTGATAATGAGGTCCAGTATTGTAGTTCAAACCAGTTGGGTCAAGTGGTTGATTATGTCAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000334352.8 ENST00000399975.7 ENST00000399976.7 ENST00000474835.5 |
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| CDS TCA 72 bp | GCAGTTTATTCGCATCTCGAAGTTTCTCATTACGGGTaGACTGATATAAACAATGTTGGATTGAACACTCAT | + |
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Preference number: 6 (lower is better) Translates to: AVYSHLEVSHYG*TDINNVGLNTH Trigger: ATGAGTGTTCAATCCAACATTGTTTATATCAGTTCACCCGTAATGAGAAACTTCGAGATGCGAATAAACTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000334352.8 ENST00000399975.7 ENST00000399976.7 ENST00000474835.5 |
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| CDS CCA 72 bp | CAAAAGTTAGTTCTAGTTCCATTTACACAGATGTCATaGGCAAGACAAGTTTACACTATGCAAAGGGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: QKLVLVPFTQMS*ARQVYTMQRVF Trigger: AAAGACCCTTTGCATAGTGTAAACTTGTCTTGCCCATGACATCTGTGTAAATGGAACTAGAACTAACTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS CAA 72 bp | CAGTTTCTGGATCTTCATTTACAACCTCATACACCTTaGTTCCAGGAGTATGACTATCATTCAGAATCTCTA | + |
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Preference number: 6 (lower is better) Translates to: QFLDLHLQPHTP*FQEYDYHSESL Trigger: TAGAGATTCTGAATGATAGTCATACTCCTGGAACAAAGGTGTATGAGGTTGTAAATGAAGATCCAGAAACTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000334352.8 ENST00000399975.7 ENST00000399976.7 ENST00000474835.5 |
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| CDS CAA 90 bp | GTTACACTTTCGATCATTTTTGCTTGGCCATTCAAATCTTTCTGGTaGACACAATATTCTTTATGCATAACACCCTCTTGTGAAATATGG | + |
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Preference number: 6 (lower is better) Translates to: VTLSIIFAWPFKSFW*TQYSLCITPSCEIW Trigger: CCATATTTCACAAGAGGGTGTTATGCATAAAGAATATTGTGTCAACCAGAAAGATTTGAATGGCCAAGCAAAAATGATCGAAAGTGTAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000334352.8 ENST00000399975.7 ENST00000399976.7 ENST00000474835.5 |
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| CDS TCA 72 bp | TTATTCGCATCTCGAAGTTTCTCATTACGGGTGAACTaGTATAAACAATGTTGGATTGAACACTCATCAGTA | + |
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Preference number: 6 (lower is better) Translates to: LFASRSFSLRVN*YKQCWIEHSSV Trigger: TACTGATGAGTGTTCAATCCAACATTGTTTATATCAGTTCACCCGTAATGAGAAACTTCGAGATGCGAATAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000334352.8 ENST00000399975.7 ENST00000399976.7 ENST00000474835.5 |
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| CDS TCA 72 bp | TCTTGTCCAGTATATCTTTATCAGCAGCATGGAAACTaGCATAATATAATTCCCATATGCAGTCTAGACCAT | + |
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Preference number: 6 (lower is better) Translates to: SCPVYLYQQHGN*HNIIPICSLDH Trigger: ATGGTCTAGACTGCATATGGGAATTATATTATGTCAGTTTCCATGCTGCTGATAAAGATATACTGGACAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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| CDS CCA 72 bp | GCTTTATCTTTCACTTTATTGTCAGTCTTACAGTCTTaGCAGATATTCCATTCCACATTCACTAAAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: ALSFTLLSVLQS*QIFHSTFTKAF Trigger: AAAGGCTTTAGTGAATGTGGAATGGAATATCTGCCAAGACTGTAAGACTGACAATAAAGTGAAAGATAAAGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000334352.8 ENST00000399973.1 ENST00000399975.7 ENST00000399976.7 ENST00000474835.5 |
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| CDS CAA 72 bp | AAGTTTACACTATGCAAAGGGTCTTTAACCATTACTTaGAGAGTGCAGAAATCATTCATGAGTCTACTCTTT | + |
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Preference number: 6 (lower is better) Translates to: KFTLCKGSLTIT*RVQKSFMSLLF Trigger: AAAGAGTAGACTCATGAATGATTTCTGCACTCTCAAAGTAATGGTTAAAGACCCTTTGCATAGTGTAAACTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485067.1 |
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