RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP15 (Homo sapiens)

Ensembl gene IDs: ENSG00000135655

Ensembl transcript IDs: ENST00000280377.10, ENST00000312635.10, ENST00000353364.7, ENST00000537297.2, ENST00000546694.1, ENST00000546718.5, ENST00000547317.5, ENST00000548524.5, ENST00000548620.1, ENST00000548836.1, ENST00000549237.5, ENST00000549268.1, ENST00000549415.1, ENST00000549523.5, ENST00000550632.5, ENST00000551206.5, ENST00000552997.1

Found 774 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCTCTCGGAGGCAGAGAGCTCCTACTACACCCTACACTCCCTTTaGTGTACCACTGAAGGAGACTCCATTTCAGTCTCCCGGCTTATT +
Preference number: 1 (lower is better)
Translates to: LLSEAESSYYTLHSL*CTTEGDSISVSRLI
Trigger: AATAAGCCGGGAGACTGAAATGGAGTCTCCTTCAGTGGTACACCAAAGGGAGTGTAGGGTGTAGTAGGAGCTCTCTGCCTCCGAGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CCA 90 bp CATTGTTCCCTTCTAATCAGGTTGCTCACCCCAAGCCTTCCTAGATaGACATTCGGGAGCTGCTCTAGTTTACAGAGAGGTGAAAGGCAG +
Preference number: 1 (lower is better)
Translates to: HCSLLIRLLTPSLPR*TFGSCSSLQRGERQ
Trigger: CTGCCTTTCACCTCTCTGTAAACTAGAGCAGCTCCCGAATGTCCATCTAGGAAGGCTTGGGGTGAGCAACCTGATTAGAAGGGAACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CCA 90 bp AATGTGGCAACCCTAAAGAGGAACCGAGCTAGACAGACAAAGGACTaGTCAGAGAGGCAAAGTCCTTGGCATAAAAGGTCGTATCATGCA +
Preference number: 1 (lower is better)
Translates to: NVATLKRNRARQTKD*SERQSPWHKRSYHA
Trigger: TGCATGATACGACCTTTTATGCCAAGGACTTTGCCTCTCTGACCAGTCCTTTGTCTGTCTAGCTCGGTTCCTCTTTAGGGTTGCCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312635.10
3UTR CCA 90 bp AGTTTTTGTGGGTTAGGAATTCAGGTGTGGCTTGCTGAGAACCTCTaGATCAAGGTCTTTCATGGTGTTGCAACCAAGGTGCCTGTTGAG +
Preference number: 1 (lower is better)
Translates to: SFCGLGIQVWLAENL*IKVFHGVATKVPVE
Trigger: CTCAACAGGCACCTTGGTTGCAACACCATGAAAGACCTTGATCCAGAGGTTCTCAGCAAGCCACACCTGAATTCCTAACCCACAAAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 90 bp GTTATCTCACAGTTTTTGTGGGTTAGGAATTCAGGTGTGGCTTGCTaGGAACCTCTGGATCAAGGTCTTTCATGGTGTTGCAACCAAGGT +
Preference number: 1 (lower is better)
Translates to: VISQFLWVRNSGVAC*EPLDQGLSWCCNQG
Trigger: ACCTTGGTTGCAACACCATGAAAGACCTTGATCCAGAGGTTCTCAGCAAGCCACACCTGAATTCCTAACCCACAAAAACTGTGAGATAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CCA 90 bp AATTGTCTAGTGGGGGAAGAGACACACGTAACTTATAGCCCAAGGTaGCAGTTGATGTCAGAAGATCTAGCAAGTGCATTTTGGAGCAAG +
Preference number: 1 (lower is better)
Translates to: NCLVGEETHVTYSPR*QLMSEDLASAFWSK
Trigger: CTTGCTCCAAAATGCACTTGCTAGATCTTCTGACATCAACTGCCACCTTGGGCTATAAGTTACGTGTGTCTCTTCCCCCACTAGACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR GCA 90 bp AAATATTTATGGTGGCTGGGAACCGAACCTGCAATATCTGAGGCATaGCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCTCA +
Preference number: 1 (lower is better)
Translates to: KYLWWLGTEPAISEA*LYPQLLLNISAMGS
Trigger: TGAGCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATATTGCAGGTTCGGTTCCCAGCCACCATAAATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CCA 90 bp AAACATCTGTTATCTCACAGTTTTTGTGGGTTAGGAATTCAGGTGTaGCTTGCTGAGAACCTCTGGATCAAGGTCTTTCATGGTGTTGCA +
Preference number: 1 (lower is better)
Translates to: KHLLSHSFCGLGIQV*LAENLWIKVFHGVA
Trigger: TGCAACACCATGAAAGACCTTGATCCAGAGGTTCTCAGCAAGCCACACCTGAATTCCTAACCCACAAAAACTGTGAGATAACAGATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 90 bp GAAGAGCTGTACATCTCTCTCTCTCTCTCAATCAAATGCTATAAATaGTTGGAGCTTAGTGAGGAAAGCATGTTGAAAGCCAAGGCAAGC +
Preference number: 1 (lower is better)
Translates to: EELYISLSLSIKCYK*LELSEESMLKAKAS
Trigger: GCTTGCCTTGGCTTTCAACATGCTTTCCTCACTAAGCTCCAATCATTTATAGCATTTGATTGAGAGAGAGAGAGAGATGTACAGCTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 90 bp CAGTATACTGGTACCCTGATCTCAGATTCCCAGCCTCCAGAACTGTaGAAATATAAATTTCTGTTATTTAAGCCACCCAGTCTGTGTTTG +
Preference number: 1 (lower is better)
Translates to: QYTGTLISDSQPPEL*KYKFLLFKPPSLCL
Trigger: CAAACACAGACTGGGTGGCTTAAATAACAGAAATTTATATTTTCACAGTTCTGGAGGCTGGGAATCTGAGATCAGGGTACCAGTATACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 90 bp GTAGGAAGGGACTGCCAGCCAGATGTAATCCTATTGAGTGCACCCTaGATACACACTTCTATTTTTAAAAATGGGATGCTACATTATAGG +
Preference number: 1 (lower is better)
Translates to: VGRDCQPDVILLSAP*IHTSIFKNGMLHYR
Trigger: CCTATAATGTAGCATCCCATTTTTAAAAATAGAAGTGTGTATTCAGGGTGCACTCAATAGGATTACATCTGGCTGGCAGTCCCTTCCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR GCA 90 bp GCTCAGAAAAAGATTCCTTTCAAAATATTACTGCTCATTGACAAGTaGACCTGGTCACCCAAGAGCTCTATGGAGATGTATGAGATTAGT +
Preference number: 1 (lower is better)
Translates to: AQKKIPFKILLLIDK*TWSPKSSMEMYEIS
Trigger: ACTAATCTCATACATCTCCATAGAGCTCTTGGGTGACCAGGTGCACTTGTCAATGAGCAGTAATATTTTGAAAGGAATCTTTTTCTGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 90 bp CTTCCCATAAAATACATGATCTCATTTGAGCTCTCAACAATCCTATaGGGCAGACACTATAACACAGTGAGAGGTAGTATATATCTGAGG +
Preference number: 1 (lower is better)
Translates to: LPIKYMISFELSTIL*GRHYNTVRGSIYLR
Trigger: CCTCAGATATATACTACCTCTCACTGTGTTATAGTGTCTGCCTCATAGGATTGTTGAGAGCTCAAATGAGATCATGTATTTTATGGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR GCA 90 bp CTGGATTGCTGCAATCTTATGATAAAACTTGAACAGATGATAAGTTaGTTCTTATGGGTGGGCAAGGAAAGTAGTTTCTTGACAATCTCA +
Preference number: 1 (lower is better)
Translates to: LDCCNLMIKLEQMIS*FLWVGKESSFLTIS
Trigger: TGAGATTGTCAAGAAACTACTTTCCTTGCCCACCCATAAGAAGCAACTTATCATCTGTTCAAGTTTTATCATAAGATTGCAGCAATCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR GCA 90 bp TGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTaGAGCCATAGATCAAAGAATAACTTCAGCTTTCAAGTCTTATCA +
Preference number: 1 (lower is better)
Translates to: CMRLVFFCLLTQHPF*SHRSKNNFSFQVLS
Trigger: TGATAAGACTTGAAAGCTGAAGTTATTCTTTGATCTATGGCTGCAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CCA 90 bp AAAAAGATTCCTTTCAAAATATTACTGCTCATTGACAAGTGCACCTaGTCACCCAAGAGCTCTATGGAGATGTATGAGATTAGTGTTTTT +
Preference number: 1 (lower is better)
Translates to: KKIPFKILLLIDKCT*SPKSSMEMYEISVF
Trigger: AAAAACACTAATCTCATACATCTCCATAGAGCTCTTGGGTGACCAGGTGCACTTGTCAATGAGCAGTAATATTTTGAAAGGAATCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 90 bp ATATATCTGAGGATAGAATATTGGCTCTACCCCATAGCAATTGTGTaGGCTTGGGAATATTACTTAAATGCTTTGTATCTTGGTTTCTTC +
Preference number: 1 (lower is better)
Translates to: IYLRIEYWLYPIAIV*AWEYYLNALYLGFF
Trigger: GAAGAAACCAAGATACAAAGCATTTAAGTAATATTCCCAAGCTCACACAATTGCTATGGGGTAGAGCCAATATTCTATCCTCAGATATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CCA 90 bp CATCATTTATCTCTTCTGATTCCGACTTCTGACTCAGATTACACATaGTCCAATCTAGCTAACATTTGTGGAGTTAATATCAGGTTATTT +
Preference number: 1 (lower is better)
Translates to: HHLSLLIPTSDSDYT*SNLANICGVNIRLF
Trigger: AAATAACCTGATATTAACTCCACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAATCAGAAGAGATAAATGATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
3UTR CCA 90 bp TATGGGTACAGAATACTATTATGTCTGTCCTTATATTACAATAATTaGGAGAGCTCAAGTTGCCAAATTACCACAAAATGGGGTAGAGAA +
Preference number: 1 (lower is better)
Translates to: YGYRILLCLSLYYNN*ESSSCQITTKWGRE
Trigger: TTCTCTACCCCATTTTGTGGTAATTTGGCAACTTGAGCTCTCCCAATTATTGTAATATAAGGACAGACATAATAGTATTCTGTACCCATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCCTGCTCATTGACAAGTaGACCTGGTCACCCAAGAGC +
Preference number: 2 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFLLIDK*TWSPKS
Trigger: GCTCTTGGGTGACCAGGTGCACTTGTCAATGAGCAG...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCGTGAGGAAAGCATGTTaGAAGCCAAGGCAAGCTGAA +
Preference number: 2 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFVRKAC*KPRQAE
Trigger: TTCAGCTTGCCTTGGCTTTCAACATGCTTTCCTCAC...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTGGCTGGAGGCTGCAGTaGGATGAGATTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTGWRLQ*DEIVPL
Trigger: CAGTGGCACAATCTCATCTCACTGCAGCCTCCAGCC...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTGTGATTTCGGCTAACTaGGGCCTTGACTGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTVISAN*GLDCLG
Trigger: GCCCAGGCAGTCAAGGCCGCAGTTAGCCGAAATCAC...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAAGCCTCCCCAGTAGCTaGGAACACAGGTGTGTGCAC +
Preference number: 2 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTSLPSS*EHRCVH
Trigger: GTGCACACACCTGTGTTCCCAGCTACTGGGGAGGCT...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCTTAGGAATTCAGGTGTaGCTTGCTGAGAACCTCTGG +
Preference number: 2 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFLGIQV*LAENLW
Trigger: CCAGAGGTTCTCAGCAAGCCACACCTGAATTCCTAA...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCCAGATACAGAACAGATaGTTTGCTCCAGAGCCCAGT +
Preference number: 2 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFQIQNR*FAPEPS
Trigger: ACTGGGCTCTGGAGCAAACCATCTGTTCTGTATCTG...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTACCAGGTGTGGTGTGGTaGCACATGCCTGTAGACCCA +
Preference number: 2 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLPGVVW*HMPVDP
Trigger: TGGGTCTACAGGCATGTGCCACCACACCACACCTGG...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCTCCTTCTCACTCCTCTaGTATTTTAGAGGACCTCTG +
Preference number: 2 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFSFSLL*YFRGPL
Trigger: CAGAGGTCCTCTAAAATATCAGAGGAGTGAGAAGGA...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTGCGGTTTTCGAAGAATaGTGCCGCAGTATTTATGCC +
Preference number: 2 (lower is better)
Translates to: SHNTILSQSLTQSKALSLAVFEE*CRSIYA
Trigger: GGCATAAATACTGCGGCAGCATTCTTCGAAAACCGC...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACATTGCACAGGCTGGAGTaGAGGGGTGTGATTTCGGCT +
Preference number: 2 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTLHRLE*RGVISA
Trigger: AGCCGAAATCACACCCCTGCACTCCAGCCTGTGCAA...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGACTCCTGGGCTCAAGTaGTCCTCCCGCCTGAGTCTC +
Preference number: 2 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPTPGLK*SSRLSL
Trigger: GAGACTCAGGCGGGAGGATCACTTGAGCCCAGGAGT...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTAGTTCAAGAACTGAATaGCTGGCTGGAGGTCGCGGT +
Preference number: 2 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTSSRTE*LAGGRG
Trigger: ACCGCGACCTCCAGCCAGTCATTCAGTTCTTGAACT...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAAGGGAGTTCAAGAACTaGATGACTGGCTGGAGGTCG +
Preference number: 2 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTREFKN*MTGWRS
Trigger: CGACCTCCAGCCAGTCATTCAGTTCTTGAACTCCCT...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAACCACCATCCTGGTaGGTATCTATCAAAATGAGG +
Preference number: 2 (lower is better)
Translates to: SHNTILSQSLTQSKALSLQPPSW*VSIKMR
Trigger: CCTCATTTTGATAGATACTCACCAGGATGGTGGTTG...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAGGGTCTCCAGCCTGCTaGCTGAAGATCATGAGACTT +
Preference number: 2 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLGSPAC*LKIMRL
Trigger: AAGTCTCATGATCTTCAGTCAGCAGGCTGGAGACCC...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCGTTTTCGAAGAATGCTaGCGCAGTATTTATGCCACA +
Preference number: 2 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFVFEEC*RSIYAT
Trigger: TGTGGCATAAATACTGCGGCAGCATTCTTCGAAAAC...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACACTGCTCATTGACAAGTaGACCTGGTCACCCAAGAGC +
Preference number: 2 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTLLIDK*TWSPKS
Trigger: GCTCTTGGGTGACCAGGTGCACTTGTCAATGAGCAG...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTAGGTCGCGGTCTTTTTaGGGAAATGAGTTAAACAGG +
Preference number: 2 (lower is better)
Translates to: SHNTILSQSLTQSKALSLRSRSF*GNELNR
Trigger: CCTGTTTAACTCATTTCCCCAAAAAGACCGCGACCT...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGTTCCAACTGCTCCACTaGCCATTCCCCATCTCTCTC +
Preference number: 2 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKFQLLH*PFPISL
Trigger: GAGAGAGATGGGGAATGGCCAGTGGAGCAGTTGGAA...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGTGGATGGATCGCCTaGGTTCAAGACTTCAAAACC +
Preference number: 2 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKGGWIA*VQDFKT
Trigger: GGTTTTGAAGTCTTGAACTCAGGCGATCCATCCACC...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGGTGATTTCGGCTAACTaGGGCCTTGACTGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPVISAN*GLDCLG
Trigger: GCCCAGGCAGTCAAGGCCGCAGTTAGCCGAAATCAC...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTACCTCCTCTGCTACCATaGAAGAACACAGTGAGAAGG +
Preference number: 2 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLPPLLP*KNTVRR
Trigger: CCTTCTCACTGTGTTCTTGCATGGTAGCAGAGGAGG...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGCCTCCTCTGCTACCATaGAAGAACACAGTGAGAAGG +
Preference number: 2 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKPPLLP*KNTVRR
Trigger: CCTTCTCACTGTGTTCTTGCATGGTAGCAGAGGAGG...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTGGAATAATTAAACCATaGCACCGTGTGGGGTATGTT +
Preference number: 2 (lower is better)
Translates to: SHNTILSQSLTQSKALSLGIIKP*HRVGYV
Trigger: AACATACCCCACACGGTGCCATGGTTTAATTATTCC...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCTCTACATCTGTAAAGTaGGATTCCTCAAGGATCTCT +
Preference number: 2 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFSTSVK*DSSRIS
Trigger: AGAGATCCTTGAGGAATCCCACTTTACAGATGTAGA...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCGCAGTGGTTGATTCATaGAGTTTAAGGAAACAAGCT +
Preference number: 2 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFAVVDS*SLRKQA
Trigger: AGCTTGTTTCCTTAAACTCCATGAATCAACCACTGC...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTACTTGAACTACACCATTaGCATTCCTGGGTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLLELHH*HSWVSS
Trigger: GCTGGAGACCCAGGAATGCCAATGGTGTAGTTCAAG...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CAA 90 bp AAGCAAATATGCAGTTTTAAGTCACATTGTTCCCTTCTAATCAGGTaGCTCACCCCAAGCCTTCCTAGATGGACATTCGGGAGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: KQICSFKSHCSLLIR*LTPSLPRWTFGSCS
Trigger: AGAGCAGCTCCCGAATGTCCATCTAGGAAGGCTTGGGGTGAGCAACCTGATTAGAAGGGAACAATGTGACTTAAAACTGCATATTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCCAGGTAGTCGATATGTaGAATGTGCCCCAGCATTTA +
Preference number: 2 (lower is better)
Translates to: NTILSQSLTQSKALSLQFQVVDM*NVPQHL
Trigger: TAAATGCTGGGGCACATTTCACATATCGACTACCTG...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGCCTTTGGTGTACCACTaGAGGAGACTCCATTTCAGT +
Preference number: 2 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKPLVYH*RRLHFS
Trigger: ACTGAAATGGAGTCTCCTTCAGTGGTACACCAAAGG...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTCCTTTGGTGTACCACTaGAGGAGACTCCATTTCAGT +
Preference number: 2 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTPLVYH*RRLHFS
Trigger: ACTGAAATGGAGTCTCCTTCAGTGGTACACCAAAGG...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTATCTATTTCACAACCCTaGCAAGTTCCAGGCTCCCAA +
Preference number: 2 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLSISQP*QVPGSQ
Trigger: TTGGGAGCCTGGAACTTGTCAGGGTTGTGAAATAGA...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGTCTATTTCACAACCCTaGCAAGTTCCAGGCTCCCAA +
Preference number: 2 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKSISQP*QVPGSQ
Trigger: TTGGGAGCCTGGAACTTGTCAGGGTTGTGAAATAGA...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGACTACAAGTGGAGCCTaGAGATGTGTCTGGATTGCT +
Preference number: 2 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKTTSGA*RCVWIA
Trigger: AGCAATCCAGACACATCTTCAGGCTCCACTTGTAGT...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCCTTCAAACGAGAGACTaGTTTCTTGTTAGGGGCCAA +
Preference number: 2 (lower is better)
Translates to: NTILSQSLTQSKALSLQFLQTRD*FLVRGQ
Trigger: TTGGCCCCTAACAAGAAATCAGTCTCTCGTTTGAAG...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGTTGCACAGGCTGGAGTaGAGGGGTGTGATTTCGGCT +
Preference number: 2 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPLHRLE*RGVISA
Trigger: AGCCGAAATCACACCCCTGCACTCCAGCCTGTGCAA...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTGAAGTAGGAAGGGACTaGCAGCCAGATGTAATCCTA +
Preference number: 2 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTEVGRD*QPDVIL
Trigger: TAGGATTACATCTGGCTGGCAGTCCCTTCCTACTTC...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAGAAGTAGGAAGGGACTaGCAGCCAGATGTAATCCTA +
Preference number: 2 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLEVGRD*QPDVIL
Trigger: TAGGATTACATCTGGCTGGCAGTCCCTTCCTACTTC...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCAGCCTCCCCAGTAGCTaGGAACACAGGTGTGTGCAC +
Preference number: 2 (lower is better)
Translates to: GVDGLSEWGFGFLININSSLPSS*EHRCVH
Trigger: GTGCACACACCTGTGTTCCCAGCTACTGGGGAGGCT...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGAGGGAGTTCAAGAACTaGATGACTGGCTGGAGGTCG +
Preference number: 2 (lower is better)
Translates to: MEMYEISVFLPANTTSILREFKN*MTGWRS
Trigger: CGACCTCCAGCCAGTCATTCAGTTCTTGAACTCCCT...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAATAATTAGGTTTAGATaGGGTCATGAGGGTGAGGGC +
Preference number: 2 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTIIRFR*GHEGEG
Trigger: GCCCTCACCCTCATGACCTCATCTAAACCTAATTAT...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTATAATTAGGTTTAGATaGGGTCATGAGGGTGAGGGC +
Preference number: 2 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTIIRFR*GHEGEG
Trigger: GCCCTCACCCTCATGACCTCATCTAAACCTAATTAT...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCGAGTATCTATCAAAATaGGGCAAGACTGTCCATCAG +
Preference number: 2 (lower is better)
Translates to: NTILSQSLTQSKALSLQFEYLSK*GKTVHQ
Trigger: CTGATGGACAGTCTTGCCTCATTTTGATAGATACTC...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTACAACCACCATCCTGGTaGGTATCTATCAAAATGAGG +
Preference number: 2 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLQPPSW*VSIKMR
Trigger: CCTCATTTTGATAGATACTCACCAGGATGGTGGTTG...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACACTTCAAACGAGAGACTaGTTTCTTGTTAGGGGCCAA +
Preference number: 2 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTLQTRD*FLVRGQ
Trigger: TTGGCCCCTAACAAGAAATCAGTCTCTCGTTTGAAG...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTTGTTACTGTTTTGTTTaGGGGCACAGACGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTCYCFV*GHRRVC
Trigger: ACACACACGTCTGTGCCCTCAAACAAAACAGTAACA...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTCTGCCGCAGTATTTATaGCACATTGATACTGCAGCT +
Preference number: 2 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTLPQYL*HIDTAA
Trigger: AGCTGCAGTATCAATGTGGCATAAATACTGCGGCAG...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCGAACAGATGATAAGTTaGTTCTTATGGGTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: NTILSQSLTQSKALSLQFEQMIS*FLWVGK
Trigger: CTTGCCCACCCATAAGAAGCAACTTATCATCTGTTC...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAGGCAGTAACTGCAGATaGGGTGAAAATAGCAAGAGA +
Preference number: 2 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTGSNCR*GENSKR
Trigger: TCTCTTGCTATTTTCACCGCATCTGCAGTTACTGCC...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTAAAAGCCATAACCTCTaGAGTCTGGATTATTGTCTT +
Preference number: 2 (lower is better)
Translates to: SHNTILSQSLTQSKALSLKSHNL*SLDYCL
Trigger: AAGACAATAATCCAGACTCCAGAGGTTATGGCTTTT...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGCAAGAGAACTACAAGTaGAGCCTGAAGATGTGTCTG +
Preference number: 2 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKQENYK*SLKMCL
Trigger: CAGACACATCTTCAGGCTCCACTTGTAGTTCTCTTG...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTACAAGAGAACTACAAGTaGAGCCTGAAGATGTGTCTG +
Preference number: 2 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLQENYK*SLKMCL
Trigger: CAGACACATCTTCAGGCTCCACTTGTAGTTCTCTTG...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCAATGCTATAAATGATTaGAGCTTAGTGAGGAAAGCA +
Preference number: 2 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFNAIND*SLVRKA
Trigger: TGCTTTCCTCACTAAGCTCCAATCATTTATAGCATT...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGATACTGTACAGGTTCTaGCTCTGGAACATGCAAATG +
Preference number: 2 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKILYRF*LWNMQM
Trigger: CATTTGCATGTTCCAGAGTCAGAACCTGTACAGTAT...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACACCTTCCCCTAGTCTATaGTTCAAGAGTTTTCCACAT +
Preference number: 2 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTPSPSL*FKSFPH
Trigger: ATGTGGAAAACTCTTGAATCATAGACTAGGGGAAGG...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAGATGTAGTGACTATCTaGGTTGTCTCCAGACTTTGT +
Preference number: 2 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLDVVTI*VVSRLC
Trigger: ACAAAGTCTGGAGACAACTCAGATAGTCACTACATC...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCAAAGCCAAGGCAAGCTaGAAGCTAGGCCTCTTGAGC +
Preference number: 2 (lower is better)
Translates to: GVDGLSEWGFGFLININSKAKAS*KLGLLS
Trigger: GCTCAAGAGGCCTAGCTTTCAGCTTGCCTTGGCTTT...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACATGGGAGAGCTCAAGTTaGCAAATTACCACAAAATGG +
Preference number: 2 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTWESSS*QITTKW
Trigger: CCATTTTGTGGTAATTTGGCAACTTGAGCTCTCCCA...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGACCCTACACTCCCTTTaGTGTACCACTGAAGGAGAC +
Preference number: 2 (lower is better)
Translates to: MEMYEISVFLPANTTSILTLHSL*CTTEGD
Trigger: GTCTCCTTCAGTGGTACACCAAAGGGAGTGTAGGGT...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGAATAATTAAACCATaGCACCGTGTGGGGTATGTT +
Preference number: 2 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKGIIKP*HRVGYV
Trigger: AACATACCCCACACGGTGCCATGGTTTAATTATTCC...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTGTTGCTTCTTATGGGTaGGCAAGGAAAGTAGTTTCT +
Preference number: 2 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTVASYG*ARKVVS
Trigger: AGAAACTACTTTCCTTGCCCACCCATAAGAAGCAAC...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp AGAGCTAAGGATGGATGTGGTCGACAGGTAAAGTACAACAATTTTACAATACTGAGGTTATTTAGGGGTTaGCTGGTCAGTCTGTGGATG +
Preference number: 2 (lower is better)
Translates to: RAKDGCGRQVKYNNFTILRLFRG*LVSLWM
Trigger: CATCCACAGACTGACCAGTCAACCCCTAAATAACCT...CAGTATTGTAAAATTGTTGTACTTTACCTGTCGACCACATCCATCCTTAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312635.10
3UTR-3UTR TCA 90 bp CATCATTTATCTCTTCTGATTCCGACTTCTGACTCAGATTACACATGGTCCAATAGGTTATTTAGGGGTTaGCTGGTCAGTCTGTGGATG +
Preference number: 2 (lower is better)
Translates to: HHLSLLIPTSDSDYTWSNRLFRG*LVSLWM
Trigger: CATCCACAGACTGACCAGTCAACCCCTAAATAACCT...ATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAATCAGAAGAGATAAATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
3UTR-3UTR TCA 90 bp CCAGGAAGCATTGAGATAAATACTACAGGTAGAGTAGAGGGACTGTCCTTAAATTCTGATTCCGACTTCTaGCTCAGATTACACATGGTC +
Preference number: 2 (lower is better)
Translates to: PGSIEINTTGRVEGLSLNSDSDF*LRLHMV
Trigger: GACCATGTGTAATCTGAGTCAGAAGTCGGAATCAGA...ATTTAAGGACAGTCCCTCTACTCTACCTGTAGTATTTATCTCAATGCTTCCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312635.10
3UTR-3UTR TCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCTTACATTCGGTTATCTaGAACTCCCCATCTCAGACT +
Preference number: 2 (lower is better)
Translates to: ISEACLYPQLLLNISAMGLHSVI*NSPSQT
Trigger: AGTCTGAGATGGGGAGTTTCAGATAACCGAATGTAA...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCACTTTAGATGGAGTATaGAATCTAGAACCTGTTTCC +
Preference number: 2 (lower is better)
Translates to: NTILSQSLTQSKALSLQFTLDGV*NLEPVS
Trigger: GGAAACAGGTTCTAGATTTCATACTCCATCTAAAGT...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGGCTGTAAGGCTATGGTaGATTCCATCAGGAACACAC +
Preference number: 2 (lower is better)
Translates to: MEMYEISVFLPANTTSILAVRLW*IPSGTH
Trigger: GTGTGTTCCTGATGGAATTCACCATAGCCTTACAGC...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCATACTGTACAGGTTCTaGCTCTGGAACATGCAAATG +
Preference number: 2 (lower is better)
Translates to: ISEACLYPQLLLNISAMGILYRF*LWNMQM
Trigger: CATTTGCATGTTCCAGAGTCAGAACCTGTACAGTAT...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACACAGACTCTACAACAGTaGTTGGTACACAAACATATG +
Preference number: 2 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTQTLQQ*LVHKHM
Trigger: CATATGTTTGTGTACCAATCACTGTTGTAGAGTCTG...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTTATGAAAAATGGGGATaGCAACTATCCCTACCTCAT +
Preference number: 2 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTYEKWG*QLSLPH
Trigger: ATGAGGTAGGGATAGTTGTCATCCCCATTTTTCATA...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGTATGAAAAATGGGGATaGCAACTATCCCTACCTCAT +
Preference number: 2 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKYEKWG*QLSLPH
Trigger: ATGAGGTAGGGATAGTTGTCATCCCCATTTTTCATA...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTGAGTTTACAAAGTCCTaGAATTCAGGGTTGCATTTG +
Preference number: 2 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTEFTKS*NSGLHL
Trigger: CAAATGCAACCCTGAATTTCAGGACTTTGTAAACTC...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCCCTTCCCCTAGTCTATaGTTCAAGAGTTTTCCACAT +
Preference number: 2 (lower is better)
Translates to: ISEACLYPQLLLNISAMGPSPSL*FKSFPH
Trigger: ATGTGGAAAACTCTTGAATCATAGACTAGGGGAAGG...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGTCCTTCTCACTCCTCTaGTATTTTAGAGGACCTCTG +
Preference number: 2 (lower is better)
Translates to: CPDMWSNIILGISMRVFLSFSLL*YFRGPL
Trigger: CAGAGGTCCTCTAAAATATCAGAGGAGTGAGAAGGA...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTCGAACCTGCAATATCTaGGGCATGCCTGTACCCACA +
Preference number: 2 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSRTCNI*GMPVPT
Trigger: TGTGGGTACAGGCATGCCTCAGATATTGCAGGTTCG...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGCTGGTGAAGATGCTGTaGACATTGTTGAAAAGACAA +
Preference number: 2 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKLVKML*TLLKRQ
Trigger: TTGTCTTTTCAACAATGTTCACAGCATCTTCACCAG...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGACTACAAGTGGAGCCTaGAGATGTGTCTGGATTGCT +
Preference number: 2 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPTTSGA*RCVWIA
Trigger: AGCAATCCAGACACATCTTCAGGCTCCACTTGTAGT...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCGTTTATTTAATGTGTTaGCTGGGCCACAGGGTGCCC +
Preference number: 2 (lower is better)
Translates to: GVDGLSEWGFGFLININSVYLMC*LGHRVP
Trigger: GGGCACCCTGTGGCCCAGTCAACACATTAAATAAAC...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAAATAAAGCACCAGGCTaGAACTTTTTCAAGGAGGTT +
Preference number: 2 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLNKAPG*NFFKEV
Trigger: AACCTCCTTGAAAAAGTTGCAGCCTGGTGCTTTATT...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGAATAAAGCACCAGGCTaGAACTTTTTCAAGGAGGTT +
Preference number: 2 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKNKAPG*NFFKEV
Trigger: AACCTCCTTGAAAAAGTTGCAGCCTGGTGCTTTATT...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCACTGCGGAGATCTATTaGTCAGAAAAAGATTCCTTT +
Preference number: 2 (lower is better)
Translates to: NTILSQSLTQSKALSLQFTAEIY*SEKDSF
Trigger: AAAGGAATCTTTTTCTGAGCAATAGATCTCCGCAGT...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTTGTAATCCTATTGAGTaGACCCTGAATACACACTTC +
Preference number: 2 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTCNPIE*TLNTHF
Trigger: GAAGTGTGTATTCAGGGTGCACTCAATAGGATTACA...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCTCATTAGTTGGTAGATaGCAGAAAGAATGTAAGCTC +
Preference number: 2 (lower is better)
Translates to: NTILSQSLTQSKALSLQFSLVGR*QKECKL
Trigger: GAGCTTACATTCTTTCTGCCATCTACCAACTAATGA...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGATTCAGGGTTGCATTTaGGGAAATGGAAAGAAGGGG +
Preference number: 2 (lower is better)
Translates to: CPDMWSNIILGISMRVFLIQGCI*GNGKKG
Trigger: CCCCTTCTTTCCATTTCCCCAAATGCAACCCTGAAT...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCACCCTACACTCCCTTTaGTGTACCACTGAAGGAGAC +
Preference number: 2 (lower is better)
Translates to: GVDGLSEWGFGFLININSTLHSL*CTTEGD
Trigger: GTCTCCTTCAGTGGTACACCAAAGGGAGTGTAGGGT...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAATCTCACAGTTTTTGTaGGTTAGGAATTCAGGTGTG +
Preference number: 2 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLISQFL*VRNSGV
Trigger: CACACCTGAATTCCTAACCCACAAAAACTGTGAGAT...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACATCTACATCTGTAAAGTaGGATTCCTCAAGGATCTCT +
Preference number: 2 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTSTSVK*DSSRIS
Trigger: AGAGATCCTTGAGGAATCCCACTTTACAGATGTAGA...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAAATATTTATGGTGGCTaGGAACCGAACCTGCAATAT +
Preference number: 2 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTNIYGG*EPNLQY
Trigger: ATATTGCAGGTTCGGTTCCCAGCCACCATAAATATT...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCAAAATTAGCCAGGTGTaGTGTGGTGGCACATGCCTG +
Preference number: 2 (lower is better)
Translates to: GVDGLSEWGFGFLININSKISQV*CGGTCL
Trigger: CAGGCATGTGCCACCACACCACACCTGGCTAATTTT...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CAA 90 bp TGGGACAAATGTGGGAAAGCCCCATTGTCAAGTAGTATGACATGTTaGAGGGCAAGTGAGGAATTAGATGAGGGCAAATTCTTACTTTTT +
Preference number: 2 (lower is better)
Translates to: WDKCGKAPLSSSMTC*RASEELDEGKFLLF
Trigger: AAAAAGTAAGAATTTGCCCTCATCTAATTCCTCACTTGCCCTCAAACATGTCATACTACTTGACAATGGGGCTTTCCCACATTTGTCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTAAGTTCAAAGTCATATaGTTGCTAAGTGGCAAAGCT +
Preference number: 2 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTKFKVI*LLSGKA
Trigger: AGCTTTGCCACTTAGCAATCATATGACTTTGAACTT...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAAAGTTCAAAGTCATATaGTTGCTAAGTGGCAAAGCT +
Preference number: 2 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTKFKVI*LLSGKA
Trigger: AGCTTTGCCACTTAGCAATCATATGACTTTGAACTT...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAAGTTCAAGGTTACAGTaGACTATGATTATGTCACTG +
Preference number: 2 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLSSRLQ*TMIMSL
Trigger: CAGTGACATAATCATAGTTCACTGTAACCTTGAACT...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGAGTTCAAGGTTACAGTaGACTATGATTATGTCACTG +
Preference number: 2 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKSSRLQ*TMIMSL
Trigger: CAGTGACATAATCATAGTTCACTGTAACCTTGAACT...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAATGTCCTTAATAGTCTaGGATCTATTTCACAACCCT +
Preference number: 2 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTMSLIV*DLFHNP
Trigger: AGGGTTGTGAAATAGATCTCAGACTATTAAGGACAT...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTATTTCTCTCTGTCCTTTaGGACTGTAGTCCAATATAT +
Preference number: 2 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLFLSVL*DCSPIY
Trigger: ATATATTGGACTACAGTCTCAAAGGACAGAGAGAAA...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCCGACAGCTTCAAAAATaGAATTTAAGCCTTCCTCTC +
Preference number: 2 (lower is better)
Translates to: ISEACLYPQLLLNISAMGRQLQK*NLSLPL
Trigger: GAGAGGAAGGCTTAAATTTCATTTTTGAAGCTGTCG...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTCTATTGAGTGCACCCTaGATACACACTTCTATTTTT +
Preference number: 2 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTLLSAP*IHTSIF
Trigger: AAAAATAGAAGTGTGTATTCAGGGTGCACTCAATAG...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGGTTTTCGAAGAATGCTaGCGCAGTATTTATGCCACA +
Preference number: 2 (lower is better)
Translates to: CPDMWSNIILGISMRVFLVFEEC*RSIYAT
Trigger: TGTGGCATAAATACTGCGGCAGCATTCTTCGAAAAC...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGCGTGCCCAGTCTGAATaGCTACTTTTAATTAGAATA +
Preference number: 2 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKRAQSE*LLLIRI
Trigger: TATTCTAATTAAAAGTAGGCATTCAGACTGGGCACG...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAACACAACATCCATTCTaGAGCCATAGATCAAAGAAT +
Preference number: 2 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTTQHPF*SHRSKN
Trigger: ATTCTTTGATCTATGGCTGCAGAATGGATGTTGTGT...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAACATCAGTCTTTTCCTaGCTTTGCACTAAAACTGAA +
Preference number: 2 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLTSVFS*LCTKTE
Trigger: TTCAGTTTTAGTGCAAAGGCAGGAAAAGACTGATGT...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAATATTTTTGGCATCCTaGATCCTTGAATGTGGTGAA +
Preference number: 2 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTIFLAS*ILECGE
Trigger: TTCACCACATTCAAGGATCCAGGATGCCAAAAATAT...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGTTCACACATATTTTTaGCATCCTGGATCCTTGAAT +
Preference number: 2 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKVHTYF*HPGSLN
Trigger: ATTCAAGGATCCAGGATGCCAAAAATATGTGTGAAC...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTTCATTAGTTGGTAGATaGCAGAAAGAATGTAAGCTC +
Preference number: 2 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTSLVGR*QKECKL
Trigger: GAGCTTACATTCTTTCTGCCATCTACCAACTAATGA...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGATTCAGGGTTGCATTTaGGGAAATGGAAAGAAGGGG +
Preference number: 2 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPIQGCI*GNGKKG
Trigger: CCCCTTCTTTCCATTTCCCCAAATGCAACCCTGAAT...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGAGGTCGCGGTCTTTTTaGGGAAATGAGTTAAACAGG +
Preference number: 2 (lower is better)
Translates to: MEMYEISVFLPANTTSILRSRSF*GNELNR
Trigger: CCTGTTTAACTCATTTCCCCAAAAAGACCGCGACCT...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGATGAAAGTCTTATGTTaGAAGATGTCATCCAGGACT +
Preference number: 2 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKMKVLC*KMSSRT
Trigger: AGTCCTGGATGACATCTTCCAACATAAGACTTTCAT...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTTTAAATGAAAATACATaGCCAGGTGCTGTGGTTCAT +
Preference number: 2 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTLNENT*PGAVVH
Trigger: ATGAACCACAGCACCTGGCCATGTATTTTCATTTAA...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp ATTCCGACTTCTGACTCAGATTACACATGGTCCAATCTAGCTAACATTTGTGGAATCATTTATCTCTTCTaGTTCCGACTTCTGACTCAG +
Preference number: 2 (lower is better)
Translates to: IPTSDSDYTWSNLANICGIIYLF*FRLLTQ
Trigger: CTGAGTCAGAAGTCGGAATCAGAAGAGATAAATGAT...TCCACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
3UTR-3UTR TCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGTTACATTCGGTTATCTaGAACTCCCCATCTCAGACT +
Preference number: 2 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPLHSVI*NSPSQT
Trigger: AGTCTGAGATGGGGAGTTTCAGATAACCGAATGTAA...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTGCTGTAAGGCTATGGTaGATTCCATCAGGAACACAC +
Preference number: 2 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSAVRLW*IPSGTH
Trigger: GTGTGTTCCTGATGGAATTCACCATAGCCTTACAGC...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCATGTCCTTAATAGTCTaGGATCTATTTCACAACCCT +
Preference number: 2 (lower is better)
Translates to: ISEACLYPQLLLNISAMGMSLIV*DLFHNP
Trigger: AGGGTTGTGAAATAGATCTCAGACTATTAAGGACAT...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGCTGGTGAAGATGCTGTaGACATTGTTGAAAAGACAA +
Preference number: 2 (lower is better)
Translates to: CPDMWSNIILGISMRVFLLVKML*TLLKRQ
Trigger: TTGTCTTTTCAACAATGTTCACAGCATCTTCACCAG...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCATATTTTTGGCATCCTaGATCCTTGAATGTGGTGAA +
Preference number: 2 (lower is better)
Translates to: ISEACLYPQLLLNISAMGIFLAS*ILECGE
Trigger: TTCACCACATTCAAGGATCCAGGATGCCAAAAATAT...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGATTTTAGAGGACCTCTaGTTCCTTCCCCTAGTCTAT +
Preference number: 2 (lower is better)
Translates to: MEMYEISVFLPANTTSILILEDL*FLPLVY
Trigger: ATAGACTAGGGGAAGGAACCAGAGGTCCTCTAAAAT...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGGTTGCTTCTTATGGGTaGGCAAGGAAAGTAGTTTCT +
Preference number: 2 (lower is better)
Translates to: MEMYEISVFLPANTTSILVASYG*ARKVVS
Trigger: AGAAACTACTTTCCTTGCCCACCCATAAGAAGCAAC...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGAATGCTATAAATGATTaGAGCTTAGTGAGGAAAGCA +
Preference number: 2 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKNAIND*SLVRKA
Trigger: TGCTTTCCTCACTAAGCTCCAATCATTTATAGCATT...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGACTTTAGATGGAGTATaGAATCTAGAACCTGTTTCC +
Preference number: 2 (lower is better)
Translates to: CPDMWSNIILGISMRVFLTLDGV*NLEPVS
Trigger: GGAAACAGGTTCTAGATTTCATACTCCATCTAAAGT...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGTTTCTCTCTGTCCTTTaGGACTGTAGTCCAATATAT +
Preference number: 2 (lower is better)
Translates to: CPDMWSNIILGISMRVFLFLSVL*DCSPIY
Trigger: ATATATTGGACTACAGTCTCAAAGGACAGAGAGAAA...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCGATGTAGTGACTATCTaGGTTGTCTCCAGACTTTGT +
Preference number: 2 (lower is better)
Translates to: GVDGLSEWGFGFLININSDVVTI*VVSRLC
Trigger: ACAAAGTCTGGAGACAACTCAGATAGTCACTACATC...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGTTGTATCTGTTACGGTaGTCTGTGATCAGTAATCTT +
Preference number: 2 (lower is better)
Translates to: CPDMWSNIILGISMRVFLLYLLR*SVISNL
Trigger: AAGATTACTGATCACAGATCACCGTAACAGATACAA...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGACACAACATCCATTCTaGAGCCATAGATCAAAGAAT +
Preference number: 2 (lower is better)
Translates to: CPDMWSNIILGISMRVFLTQHPF*SHRSKN
Trigger: ATTCTTTGATCTATGGCTGCAGAATGGATGTTGTGT...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp ATTCCGACTTCTGACTCAGATTACACATGGTCCAATCTAGCTAACATTTGTGGAGACTCAGATTACACATaGTCCAATCTAGCTAACATT +
Preference number: 2 (lower is better)
Translates to: IPTSDSDYTWSNLANICGDSDYT*SNLANI
Trigger: AATGTTAGCTAGATTGGACCATGTGTAATCTGAGTC...TCCACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
3UTR-3UTR CCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGATCTCACAGTTTTTGTaGGTTAGGAATTCAGGTGTG +
Preference number: 2 (lower is better)
Translates to: MEMYEISVFLPANTTSILISQFL*VRNSGV
Trigger: CACACCTGAATTCCTAACCCACAAAAACTGTGAGAT...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGACATATGCATCCTATTaGTCTTGTTTCTCTGGAGAA +
Preference number: 2 (lower is better)
Translates to: CPDMWSNIILGISMRVFLTYASY*SCFSGE
Trigger: TTCTCCAGAGAAACAAGACCAATAGGATGCATATGT...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp AGAGCTAAGGATGGATGTGGTCGACAGGTAAAGTACAACAATTTTACAATACTGTGCAGACATTACTGTTaGGTGATAACGCATCATTTA +
Preference number: 2 (lower is better)
Translates to: RAKDGCGRQVKYNNFTILCRHYC*VITHHL
Trigger: TAAATGATGCGTTATCACTCAACAGTAATGTCTGCA...CAGTATTGTAAAATTGTTGTACTTTACCTGTCGACCACATCCATCCTTAGCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312635.10
3UTR-3UTR TCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCCTTGCAGCTGAAAAATaGCATTTGAGTTTGGCAGTT +
Preference number: 2 (lower is better)
Translates to: GVDGLSEWGFGFLININSLAAEK*HLSLAV
Trigger: AACTGCCAAACTCAAATGTCATTTTTCAGCTGCAAG...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGCGTGCCCAGTCTGAATaGCTACTTTTAATTAGAATA +
Preference number: 2 (lower is better)
Translates to: MEMYEISVFLPANTTSILRAQSE*LLLIRI
Trigger: TATTCTAATTAAAAGTAGGCATTCAGACTGGGCACG...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGGTTACTAAATATATCTaGTATGGGCTCAACTGTGTC +
Preference number: 2 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPVTKYI*YGLNCV
Trigger: GACACAGTTGAGCCCATAGCAGATATATTTAGTAAC...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGTGCTACATTATAGGCTaGCAAAGACATGTAGTTATT +
Preference number: 2 (lower is better)
Translates to: CPDMWSNIILGISMRVFLCYIIG*QRHVVI
Trigger: AATAACTACATGTCTTTGGCAGCCTATAATGTAGCA...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp CATCATTTATCTCTTCTGATTCCGACTTCTGACTCAGATTACACATGGTCCAATGACTCAGATTACACATaGTCCAATCTAGCTAACATT +
Preference number: 2 (lower is better)
Translates to: HHLSLLIPTSDSDYTWSNDSDYT*SNLANI
Trigger: AATGTTAGCTAGATTGGACCATGTGTAATCTGAGTC...ATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAATCAGAAGAGATAAATGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
3UTR-3UTR CCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGTCTGAAGAATTAGGATaGAGACCACAATATAGGTTT +
Preference number: 2 (lower is better)
Translates to: CPDMWSNIILGISMRVFLSEELG*RPQYRF
Trigger: AAACCTATATTGTGGTCTCCATCCTAATTCTTCAGA...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTATTTTAGAGGACCTCTaGTTCCTTCCCCTAGTCTAT +
Preference number: 2 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSILEDL*FLPLVY
Trigger: ATAGACTAGGGGAAGGAACCAGAGGTCCTCTAAAAT...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGCTGATTTTCCTTGAATaGCTTAGCCAGTTTCTGAAT +
Preference number: 2 (lower is better)
Translates to: MEMYEISVFLPANTTSILLIFLE*LSQFLN
Trigger: ATTCAGAAACTGGCTAAGCCATTCAAGGAAAATCAG...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGTTATTTAAATATTTATaGTGGCTGGGAACCGAACCT +
Preference number: 2 (lower is better)
Translates to: CPDMWSNIILGISMRVFLLFKYL*WLGTEP
Trigger: AGGTTCGGTTCCCAGCCACCATAAATATTTAAATAA...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCTATCATTGGTTTTCCTaGTTCTCAACCCTTTGGACT +
Preference number: 2 (lower is better)
Translates to: GVDGLSEWGFGFLININSYHWFS*FSTLWT
Trigger: AGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATA...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CAA 90 bp GATGGATGTGGTCGACAGGTAAAGTACAACAATTTTACAATACTGTaGCAGACATTACTGTTGAGTGATAACGCATCATTTATCTCTTCT +
Preference number: 2 (lower is better)
Translates to: DGCGRQVKYNNFTIL*QTLLLSDNASFISS
Trigger: AGAAGAGATAAATGATGCGTTATCACTCAACAGTAATGTCTGCAACAGTATTGTAAAATTGTTGTACTTTACCTGTCGACCACATCCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312635.10
3UTR-3UTR TCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTCTTGCAGCTGAAAAATaGCATTTGAGTTTGGCAGTT +
Preference number: 2 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSLAAEK*HLSLAV
Trigger: AACTGCCAAACTCAAATGTCATTTTTCAGCTGCAAG...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR GCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCACTGCGGAGATCTATTaGTCAGAAAAAGATTCCTTT +
Preference number: 2 (lower is better)
Translates to: GVDGLSEWGFGFLININSTAEIY*SEKDSF
Trigger: AAAGGAATCTTTTTCTGAGCAATAGATCTCCGCAGT...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTAATATTTATGGTGGCTaGGAACCGAACCTGCAATAT +
Preference number: 2 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSNIYGG*EPNLQY
Trigger: ATATTGCAGGTTCGGTTCCCAGCCACCATAAATATT...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGAAGGATTTGCTATTCTaGATGCCATTCATTCAGAAT +
Preference number: 2 (lower is better)
Translates to: MEMYEISVFLPANTTSILKDLLF*MPFIQN
Trigger: ATTCTGAATGAATGGCATCCAGAATAGCAAATCCTT...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCATGAAAGTCTTATGTTaGAAGATGTCATCCAGGACT +
Preference number: 2 (lower is better)
Translates to: GVDGLSEWGFGFLININSMKVLC*KMSSRT
Trigger: AGTCCTGGATGACATCTTCCAACATAAGACTTTCAT...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR TCA 90 bp TACACATGGTCCAATCTAGCTAACATTTGTGGAGTTAATATCAGGTTATTTAGGTTAGCTCTCTTTCTGTaGCGTATGTGGAAATTAAAC +
Preference number: 2 (lower is better)
Translates to: YTWSNLANICGVNIRLFRLALFL*RMWKLN
Trigger: GTTTAATTTCCACATACGTCACAGAAAGAGAGCTAA...CCTAAATAACCTGATATTAACTCCACAAATGTTAGCTAGATTGGACCATGTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
3UTR CCA 72 bp GCCAGGAAAGGCACCCTCACCAGAAACCCAGTATACTaGTACCCTGATCTCAGATTCCCAGCCTCCAGAACT +
Preference number: 3 (lower is better)
Translates to: ARKGTLTRNPVY*YPDLRFPASRT
Trigger: AGTTCTGGAGGCTGGGAATCTGAGATCAGGGTACCAGTATACTGGGTTTCTGGTGAGGGTGCCTTTCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTGAGATGCCTCAGAGCTaGCTCTCCTCTCTGACCCTC +
Preference number: 3 (lower is better)
Translates to: SHNTILSQSLTQSKALSLEMPQS*LSSLTL
Trigger: GAGGGTCAGAGAGGAGAGCAAGCTCTGAGGCATCTC...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CCA 72 bp GAGGCAGAGAGCTCCTACTACACCCTACACTCCCTTTaGTGTACCACTGAAGGAGACTCCATTTCAGTCTCC +
Preference number: 3 (lower is better)
Translates to: EAESSYYTLHSL*CTTEGDSISVS
Trigger: GGAGACTGAAATGGAGTCTCCTTCAGTGGTACACCAAAGGGAGTGTAGGGTGTAGTAGGAGCTCTCTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACACGGCTAACTGCGGCCTaGACTGCCTGGGCTCAAGCA +
Preference number: 3 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTRLTAA*TAWAQA
Trigger: TGCTTGAGCCCAGGCAGTCAAGGCCGCAGTTAGCCG...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCAGGTCTTTCATGGTGTaGCAACCAAGGTGCCTGTTG +
Preference number: 3 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFRSFMV*QPRCLL
Trigger: CAACAGGCACCTTGGTTGCAACACCATGAAAGACCT...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 72 bp TGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTTaGACTACACCATTGGCATTCCTGGGTCTCCAGCCT +
Preference number: 3 (lower is better)
Translates to: WFSWFSTLWTRT*TTPLAFLGLQP
Trigger: AGGCTGGAGACCCAGGAATGCCAATGGTGTAGTTCAAGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CCA 72 bp TCTCAACCCTTTGGACTCGGACTTGAACTACACCATTaGCATTCCTGGGTCTCCAGCCTGCTGACTGAAGAT +
Preference number: 3 (lower is better)
Translates to: SQPFGLGLELHH*HSWVSSLLTED
Trigger: ATCTTCAGTCAGCAGGCTGGAGACCCAGGAATGCCAATGGTGTAGTTCAAGTCCGAGTCCAAAGGGTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTGAGATGCCTCAGAGCTaGCTCTCCTCTCTGACCCTC +
Preference number: 3 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTEMPQS*LSSLTL
Trigger: GAGGGTCAGAGAGGAGAGCAAGCTCTGAGGCATCTC...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 72 bp AGGCACCCTCACCAGAAACCCAGTATACTGGTACCCTaGTCTCAGATTCCCAGCCTCCAGAACTGTGAAAAT +
Preference number: 3 (lower is better)
Translates to: RHPHQKPSILVP*SQIPSLQNCEN
Trigger: ATTTTCACAGTTCTGGAGGCTGGGAATCTGAGATCAGGGTACCAGTATACTGGGTTTCTGGTGAGGGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 72 bp CACGGCCACCCTAACCTTCAGCAACCACCATCCTGGTaGGTATCTATCAAAATGAGGCAAGACTGTCCATCA +
Preference number: 3 (lower is better)
Translates to: HGHPNLQQPPSW*VSIKMRQDCPS
Trigger: TGATGGACAGTCTTGCCTCATTTTGATAGATACTCACCAGGATGGTGGTTGCTGAAGGTTAGGGTGGCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 72 bp AACTACACCATTGGCATTCCTGGGTCTCCAGCCTGCTaGCTGAAGATCATGAGACTTCTCAGCCTAAGTGCA +
Preference number: 3 (lower is better)
Translates to: NYTIGIPGSPAC*LKIMRLLSLSA
Trigger: TGCACTTAGGCTGAGAAGTCTCATGATCTTCAGTCAGCAGGCTGGAGACCCAGGAATGCCAATGGTGTAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CCA 72 bp ACCCTAAAGAGGAACCGAGCTAGACAGACAAAGGACTaGTCAGAGAGGCAAAGTCCTTGGCATAAAAGGTCG +
Preference number: 3 (lower is better)
Translates to: TLKRNRARQTKD*SERQSPWHKRS
Trigger: CGACCTTTTATGCCAAGGACTTTGCCTCTCTGACCAGTCCTTTGTCTGTCTAGCTCGGTTCCTCTTTAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312635.10
3UTR CCA 72 bp CTTCTAATCAGGTTGCTCACCCCAAGCCTTCCTAGATaGACATTCGGGAGCTGCTCTAGTTTACAGAGAGGT +
Preference number: 3 (lower is better)
Translates to: LLIRLLTPSLPR*TFGSCSSLQRG
Trigger: ACCTCTCTGTAAACTAGAGCAGCTCCCGAATGTCCATCTAGGAAGGCTTGGGGTGAGCAACCTGATTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 72 bp CTCCTACTACACCCTACACTCCCTTTGGTGTACCACTaGAGGAGACTCCATTTCAGTCTCCCGGCTTATTTT +
Preference number: 3 (lower is better)
Translates to: LLLHPTLPLVYH*RRLHFSLPAYF
Trigger: AAAATAAGCCGGGAGACTGAAATGGAGTCTCCTTCAGTGGTACACCAAAGGGAGTGTAGGGTGTAGTAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR GCA 72 bp GAAGTTCAAAACCTCAGTGGCGGCAGTAACTGCAGATaGGGTGAAAATAGCAAGAGAACTACAAGTGGAGCC +
Preference number: 3 (lower is better)
Translates to: EVQNLSGGSNCR*GENSKRTTSGA
Trigger: GGCTCCACTTGTAGTTCTCTTGCTATTTTCACCGCATCTGCAGTTACTGCCGCCACTGAGGTTTTGAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCTCTGAGGATAGAATATaGGCTCTACCCCATAGCAAT +
Preference number: 3 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFSEDRI*ALPHSN
Trigger: ATTGCTATGGGGTAGAGCCAATATTCTATCCTCAGA...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTAGGTTAATGACCTGTTaGGAGCTAGCTATGGTGGAA +
Preference number: 3 (lower is better)
Translates to: SHNTILSQSLTQSKALSLRLMTC*ELAMVE
Trigger: TTCCACCATAGCTAGCTCCAAACAGGTCATTAACCT...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTATACAGAACAGATGGTTaGCTCCAGAGCCCAGTGCCA +
Preference number: 3 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLYRTDG*LQSPVP
Trigger: TGGCACTGGGCTCTGGAGCAAACCATCTGTTCTGTA...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTCGGCTAACTGCGGCCTaGACTGCCTGGGCTCAAGCA +
Preference number: 3 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSRLTAA*TAWAQA
Trigger: TGCTTGAGCCCAGGCAGTCAAGGCCGCAGTTAGCCG...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTTCTGAGGATAGAATATaGGCTCTACCCCATAGCAAT +
Preference number: 3 (lower is better)
Translates to: SHNTILSQSLTQSKALSLSEDRI*ALPHSN
Trigger: ATTGCTATGGGGTAGAGCCAATATTCTATCCTCAGA...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCGTTATCTCACAGTTTTaGTGGGTTAGGAATTCAGGT +
Preference number: 3 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFVISQF*WVRNSG
Trigger: ACCTGAATTCCTAACCCACAAAAACTGTGAGATAAC...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCCAAAAACATTACTACTaGCTGAAGGCTCTGATGGTT +
Preference number: 3 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFQKHYY*LKALMV
Trigger: AACCATCAGAGCCTTCAGCAAGTAGTAATGTTTTTG...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 72 bp ATAATCCTTGGTGCTTCTATTAGGGAGTTCAAGAACTaGATGACTGGCTGGAGGTCGCGGTCTTTTTGGGGA +
Preference number: 3 (lower is better)
Translates to: IILGASIREFKN*MTGWRSRSFWG
Trigger: TCCCCAAAAAGACCGCGACCTCCAGCCAGTCATTCAGTTCTTGAACTCCCTAATAGAAGCACCAAGGATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR GCA 72 bp TGGTGGCTGGGAACCGAACCTGCAATATCTGAGGCATaGCTGTACCCACAGTTGTTACTAAATATATCTGCT +
Preference number: 3 (lower is better)
Translates to: WWLGTEPAISEA*LYPQLLLNISA
Trigger: AGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATATTGCAGGTTCGGTTCCCAGCCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CCA 72 bp TTTTCCTTCAAGCACCAGGTTAACAGGCAACCTGGGTaGACTGACTGTACCATACTCTTTGCTCTCTTGCTA +
Preference number: 3 (lower is better)
Translates to: FSFKHQVNRQPG*TDCTILFALLL
Trigger: TAGCAAGAGAGCAAAGAGTATGGTACAGTCAGTCCACCCAGGTTGCCTGTTAACCTGGTGCTTGAAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CCA 72 bp GTGGGGGAAGAGACACACGTAACTTATAGCCCAAGGTaGCAGTTGATGTCAGAAGATCTAGCAAGTGCATTT +
Preference number: 3 (lower is better)
Translates to: VGEETHVTYSPR*QLMSEDLASAF
Trigger: AAATGCACTTGCTAGATCTTCTGACATCAACTGCCACCTTGGGCTATAAGTTACGTGTGTCTCTTCCCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCTTGTGGGAAAGACTGTaGGGATGTTTCCATATTTAT +
Preference number: 3 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFLWERL*GCFHIY
Trigger: ATAAATATGGAAACATCCCAACAGTCTTTCCCACAA...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTACCTTTGGACTCGGACTaGAACTACACCATTGGCATT +
Preference number: 3 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLPLDSD*NYTIGI
Trigger: AATGCCAATGGTGTAGTTCAAGTCCGAGTCCAAAGG...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR GCA 72 bp GGCATGCCTGTACCCACAGTTGTTACTAAATATATCTaGTATGGGCTCAACTGTGTCACCTCCAAATTCAGG +
Preference number: 3 (lower is better)
Translates to: GMPVPTVVTKYI*YGLNCVTSKFR
Trigger: CCTGAATTTGGAGGTGACACAGTTGAGCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAAATTCAGGGTTGCATTaGGGGAAATGGAAAGAAGGG +
Preference number: 3 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTNSGLH*GKWKEG
Trigger: CCCTTCTTTCCATTTCCCCAAATGCAACCCTGAATT...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCGATGAAAGTCTTATGTaGGAAGATGTCATCCAGGAC +
Preference number: 3 (lower is better)
Translates to: NTILSQSLTQSKALSLQFDESLM*EDVIQD
Trigger: GTCCTGGATGACATCTTCCAACATAAGACTTTCATC...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 72 bp GCCAAGGAGGGCCTATCACATAGACTACATATGATATaGATGATGCCTCCTAGAGCTGTGCACAATTTGCAA +
Preference number: 3 (lower is better)
Translates to: AKEGLSHRLHMI*MMPPRAVHNLQ
Trigger: TTGCAAATTGTGCACAGCTCTAGGAGGCATCATTCATATCATATGTAGTCTATGTGATAGGCCCTCCTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312635.10
3UTR TCA 72 bp GAAGCTGCAGAAGAAAAGTCTGAAGCTAGCAGTGGTTaGTTCATGGAGTTTAAGGAAACAAGCTGTCTCCAC +
Preference number: 3 (lower is better)
Translates to: EAAEEKSEASSG*FMEFKETSCLH
Trigger: GTGGAGACAGCTTGTTTCCTTAAACTCCATGAATCAACCACTGCTAGCTTCAGACTTTTCTTCTGCAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGAGGTCTTTCATGGTGTaGCAACCAAGGTGCCTGTTG +
Preference number: 3 (lower is better)
Translates to: MEMYEISVFLPANTTSILRSFMV*QPRCLL
Trigger: CAACAGGCACCTTGGTTGCAACACCATGAAAGACCT...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCTACAGAACAGATGGTTaGCTCCAGAGCCCAGTGCCA +
Preference number: 3 (lower is better)
Translates to: GVDGLSEWGFGFLININSYRTDG*LQSPVP
Trigger: TGGCACTGGGCTCTGGAGCAAACCATCTGTTCTGTA...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACACACTGCGGAGATCTATaGCTCAGAAAAAGATTCCTT +
Preference number: 3 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTHCGDL*LRKRFL
Trigger: AAGGAATCTTTTTCTGAGCAATAGATCTCCGCAGTG...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 72 bp ATATTTATGGTGGCTGGGAACCGAACCTGCAATATCTaGGGCATGCCTGTACCCACAGTTGTTACTAAATAT +
Preference number: 3 (lower is better)
Translates to: IFMVAGNRTCNI*GMPVPTVVTKY
Trigger: ATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATATTGCAGGTTCGGTTCCCAGCCACCATAAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CCA 72 bp TTATCTCACAGTTTTTGTGGGTTAGGAATTCAGGTGTaGCTTGCTGAGAACCTCTGGATCAAGGTCTTTCAT +
Preference number: 3 (lower is better)
Translates to: LSHSFCGLGIQV*LAENLWIKVFH
Trigger: ATGAAAGACCTTGATCCAGAGGTTCTCAGCAAGCCACACCTGAATTCCTAACCCACAAAAACTGTGAGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CCA 72 bp CAGAAGAAAAGTCTGAAGCTAGCAGTGGTTGATTCATaGAGTTTAAGGAAACAAGCTGTCTCCACAACAGAC +
Preference number: 3 (lower is better)
Translates to: QKKSLKLAVVDS*SLRKQAVSTTD
Trigger: GTCTGTTGTGGAGACAGCTTGTTTCCTTAAACTCCATGAATCAACCACTGCTAGCTTCAGACTTTTCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCTTTAATAGGCCCACATaGATTACGGGGATAAATTTG +
Preference number: 3 (lower is better)
Translates to: NTILSQSLTQSKALSLQFFNRPT*ITGINL
Trigger: CAAATTTATCCCCGTAATCAATGTGGGCCTATTAAA...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTTGTTCACACATATTTTaGGCATCCTGGATCCTTGAA +
Preference number: 3 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTCSHIF*ASWILE
Trigger: TTCAAGGATCCAGGATGCCAAAAATATGTGTGAACA...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGCAACCAAGGTGCCTGTaGAGGATGCAGTCTCATATA +
Preference number: 3 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPQPRCL*RMQSHI
Trigger: TATATGAGACTGCATCCTCAACAGGCACCTTGGTTG...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGCAAAAACATTACTACTaGCTGAAGGCTCTGATGGTT +
Preference number: 3 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKQKHYY*LKALMV
Trigger: AACCATCAGAGCCTTCAGCAAGTAGTAATGTTTTTG...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTACTGGAACTTTTATCATaGGTTTTCCTGGTTCTCAAC +
Preference number: 3 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLLELLS*VFLVLN
Trigger: GTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAG...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 72 bp AACATTTGTGGAGTTAATATCAGGTTATTTAGGGGTTaGCTGGTCAGTCTGTGGATGATAACCAGAGCCCTT +
Preference number: 3 (lower is better)
Translates to: NICGVNIRLFRG*LVSLWMITRAL
Trigger: AAGGGCTCTGGTTATCATCCACAGACTGACCAGTCAACCCCTAAATAACCTGATATTAACTCCACAAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
3UTR TCA 72 bp GTGGATGATAACCAGAGCCCTTTAGCTCTCTTTCTGTaGCGTATGTGGAAATTAAACTGTTCACTAGCAACT +
Preference number: 3 (lower is better)
Translates to: VDDNQSPLALFL*RMWKLNCSLAT
Trigger: AGTTGCTAGTGAACAGTTTAATTTCCACATACGTCACAGAAAGAGAGCTAAAGGGCTCTGGTTATCATCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552997.1
3UTR-3UTR CAA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGTTTAATAGGCCCACATaGATTACGGGGATAAATTTG +
Preference number: 3 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKFNRPT*ITGINL
Trigger: CAAATTTATCCCCGTAATCAATGTGGGCCTATTAAA...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAAGCAATTGTGTGAGCTaGGGAATATTACTTAAATGC +
Preference number: 3 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLSNCVS*GILLKC
Trigger: GCATTTAAGTAATATTCCCAAGCTCACACAATTGCT...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGCCCACCACCTTTATGTaGTATCTATTTTGGTACTTA +
Preference number: 3 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKPTTFM*YLFWYL
Trigger: TAAGTACCAAAATAGATACAACATAAAGGTGGTGGG...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAAAATTGGCCTTTTTCTaGTCACCATACATCAGACTT +
Preference number: 3 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLKLAFF*SPYIRL
Trigger: AAGTCTGATGTATGGTGACAAGAAAAAGGCCAATTT...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGTTGTGGGAAAGACTGTaGGGATGTTTCCATATTTAT +
Preference number: 3 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKLWERL*GCFHIY
Trigger: ATAAATATGGAAACATCCCAACAGTCTTTCCCACAA...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAAAGGAAAGTAGTTTCTaGACAATCTCAACATCTGTG +
Preference number: 3 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLKESSF*TISTSV
Trigger: CACAGATGTTGAGATTGTCAAGAAACTACTTTCCTT...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCCCTTTGGACTCGGACTaGAACTACACCATTGGCATT +
Preference number: 3 (lower is better)
Translates to: GVDGLSEWGFGFLININSPLDSD*NYTIGI
Trigger: AATGCCAATGGTGTAGTTCAAGTCCGAGTCCAAAGG...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGTTGGGAGAGCTCAAGTaGCCAAATTACCACAAAATG +
Preference number: 3 (lower is better)
Translates to: MEMYEISVFLPANTTSILLGELK*PNYHKM
Trigger: CATTTTGTGGTAATTTGGCAACTTGAGCTCTCCCAA...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTCAACCAAGGTGCCTGTaGAGGATGCAGTCTCATATA +
Preference number: 3 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSQPRCL*RMQSHI
Trigger: TATATGAGACTGCATCCTCAACAGGCACCTTGGTTG...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGCCTTCTGAAAAGGATTaGCTATTCTGGATGCCATTC +
Preference number: 3 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPPSEKD*LFWMPF
Trigger: GAATGGCATCCAGAATAGCAAATCCTTTTCAGAAGG...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGAAATATTACTGCTCATaGACAAGTGCACCTGGTCAC +
Preference number: 3 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPKYYCS*TSAPGH
Trigger: GTGACCAGGTGCACTTGTCAATGAGCAGTAATATTT...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 72 bp GTGGGACACAAAGCAATTTCTCAGGTAGTCGATATGTaGAATGTGCCCCAGCATTTAGGTTTTCTATTAAAG +
Preference number: 3 (lower is better)
Translates to: VGHKAISQVVDM*NVPQHLGFLLK
Trigger: CTTTAATAGAAAACCTAAATGCTGGGGCACATTTCACATATCGACTACCTGAGAAATTGCTTTGTGTCCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 72 bp TCAGAAAAAGATTCCTTTCAAAATATTACTGCTCATTaGCAAGTGCACCTGGTCACCCAAGAGCTCTATGGA +
Preference number: 3 (lower is better)
Translates to: SEKDSFQNITAH*QVHLVTQELYG
Trigger: TCCATAGAGCTCTTGGGTGACCAGGTGCACTTGTCAATGAGCAGTAATATTTTGAAAGGAATCTTTTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 72 bp TGTTTTTGGATGAGATTAACATTTAAGTCAGTAGACTaGGTAAGGCAGATTGCCCTCTCTAATGTTGGTGGC +
Preference number: 3 (lower is better)
Translates to: CFWMRLTFKSVD*VRQIALSNVGG
Trigger: GCCACCAACATTAGAGAGGGCAATCTGCCTTACTCAGTCTACTGACTTAAATGTTAATCTCATCCAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR GCA 72 bp AAGATTCCTTTCAAAATATTACTGCTCATTGACAAGTaGACCTGGTCACCCAAGAGCTCTATGGAGATGTAT +
Preference number: 3 (lower is better)
Translates to: KIPFKILLLIDK*TWSPKSSMEMY
Trigger: ATACATCTCCATAGAGCTCTTGGGTGACCAGGTGCACTTGTCAATGAGCAGTAATATTTTGAAAGGAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR GCA 72 bp TACATATGCTGCTTTGGACACAATTTGGTCTTCAGATaGAGTGGAGACACTACTGTCATCAAAATAGTACCA +
Preference number: 3 (lower is better)
Translates to: YICCFGHNLVFR*SGDTTVIKIVP
Trigger: TGGTACTATTTTGATGACAGTAGTGTCTCCACTGCATCTGAAGACCAAATTGTGTCCAAAGCAGCATATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548620.1
3UTR CCA 72 bp ATTTGTGACTCACTTTATTTAAATATTTATGGTGGCTaGGAACCGAACCTGCAATATCTGAGGCATGCCTGT +
Preference number: 3 (lower is better)
Translates to: ICDSLYLNIYGG*EPNLQYLRHAC
Trigger: ACAGGCATGCCTCAGATATTGCAGGTTCGGTTCCCAGCCACCATAAATATTTAAATAAAGTGAGTCACAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CCA 72 bp ACACTATTAAAACCAGGCCAGTTAATAACCATCCAATaGCCTCTAAATGTTCAGGTGAAGAGCTGTACATCT +
Preference number: 3 (lower is better)
Translates to: TLLKPGQLITIQ*PLNVQVKSCTS
Trigger: AGATGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCCTGGTTTTAATAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCTTGGGAGAGCTCAAGTaGCCAAATTACCACAAAATG +
Preference number: 3 (lower is better)
Translates to: GVDGLSEWGFGFLININSLGELK*PNYHKM
Trigger: CATTTTGTGGTAATTTGGCAACTTGAGCTCTCCCAA...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTAATTCAGGGTTGCATTaGGGGAAATGGAAAGAAGGG +
Preference number: 3 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSNSGLH*GKWKEG
Trigger: CCCTTCTTTCCATTTCCCCAAATGCAACCCTGAATT...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGAAGGAAAGTAGTTTCTaGACAATCTCAACATCTGTG +
Preference number: 3 (lower is better)
Translates to: CPDMWSNIILGISMRVFLKESSF*TISTSV
Trigger: CACAGATGTTGAGATTGTCAAGAAACTACTTTCCTT...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCGATGAAAGTCTTATGTaGGAAGATGTCATCCAGGAC +
Preference number: 3 (lower is better)
Translates to: GVDGLSEWGFGFLININSDESLM*EDVIQD
Trigger: GTCCTGGATGACATCTTCCAACATAAGACTTTCATC...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp TACACATGGTCCAATCTAGCTAACATTTGTGGAGTTAATATCAGGTTATTTAGGATTGGAACACAGGCATaGCCATGTCTTGACATGATG +
Preference number: 3 (lower is better)
Translates to: YTWSNLANICGVNIRLFRIGTQA*PCLDMM
Trigger: CATCATGTCAAGACATGGCAATGCCTGTGTTCCAAT...CCTAAATAACCTGATATTAACTCCACAAATGTTAGCTAGATTGGACCATGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552997.1
3UTR TCA 72 bp TACATCTCTCTCTCTCTCTCAATCAAATGCTATAAATaGTTGGAGCTTAGTGAGGAAAGCATGTTGAAAGCC +
Preference number: 3 (lower is better)
Translates to: YISLSLSIKCYK*LELSEESMLKA
Trigger: GGCTTTCAACATGCTTTCCTCACTAAGCTCCAATCATTTATAGCATTTGATTGAGAGAGAGAGAGAGATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR GCA 72 bp GAGAACTACAAGTGGAGCCTGAAGATGTGTCTGGATTaGTGCAATCTTATGATAAAACTTGAACAGATGATA +
Preference number: 3 (lower is better)
Translates to: ENYKWSLKMCLD*CNLMIKLEQMI
Trigger: TATCATCTGTTCAAGTTTTATCATAAGATTGCAGCAATCCAGACACATCTTCAGGCTCCACTTGTAGTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR GCA 72 bp GAGCACATCTATAGGTGTTATTTTCCTAACAGAATGTaGTTACTGTGTGTGTGTCATATCTTGGTACTTCTC +
Preference number: 3 (lower is better)
Translates to: EHIYRCYFPNRM*LLCVCHILVLL
Trigger: GAGAAGTACCAAGATATGACACACACACAGTAAGCACATTCTGTTAGGAAAATAACACCTATAGATGTGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CCA 72 bp TCTCTTCTGATTCCGACTTCTGACTCAGATTACACATaGTCCAATCTAGCTAACATTTGTGGAGTTAATATC +
Preference number: 3 (lower is better)
Translates to: SLLIPTSDSDYT*SNLANICGVNI
Trigger: GATATTAACTCCACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAATCAGAAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
3UTR-3UTR CAA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGCCCACCACCTTTATGTaGTATCTATTTTGGTACTTA +
Preference number: 3 (lower is better)
Translates to: MEMYEISVFLPANTTSILPTTFM*YLFWYL
Trigger: TAAGTACCAAAATAGATACAACATAAAGGTGGTGGG...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGCACATACATATTGAATaGAAATGGCCTCCAAACCTA +
Preference number: 3 (lower is better)
Translates to: MEMYEISVFLPANTTSILHIHIE*KWPPNL
Trigger: TAGGTTTGGAGGCCATTTCAATTCAATATGTATGTG...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCGTTATCTCACAGTTTTaGTGGGTTAGGAATTCAGGT +
Preference number: 3 (lower is better)
Translates to: GVDGLSEWGFGFLININSVISQF*WVRNSG
Trigger: ACCTGAATTCCTAACCCACAAAAACTGTGAGATAAC...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR GCA 72 bp TTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTaGAGCCATAGATCAAAGAATAACTTCAGCTTTCAA +
Preference number: 3 (lower is better)
Translates to: LVFFCLLTQHPF*SHRSKNNFSFQ
Trigger: TTGAAAGCTGAAGTTATTCTTTGATCTATGGCTGCAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCCACATACATATTGAATaGAAATGGCCTCCAAACCTA +
Preference number: 3 (lower is better)
Translates to: GVDGLSEWGFGFLININSHIHIE*KWPPNL
Trigger: TAGGTTTGGAGGCCATTTCAATTCAATATGTATGTG...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCACAACTTTCATGACTTaGAGAAGTTCAAAACCTCAG +
Preference number: 3 (lower is better)
Translates to: GVDGLSEWGFGFLININSTTFMT*RSSKPQ
Trigger: CTGAGGTTTTGAACTTCTCAAAGTCATGAAAGTTGT...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR-3UTR CAA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTAGCAATTGTGTGAGCTaGGGAATATTACTTAAATGC +
Preference number: 3 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSSNCVS*GILLKC
Trigger: GCATTTAAGTAATATTCCCAAGCTCACACAATTGCT...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 72 bp AGGATAGAATATTGGCTCTACCCCATAGCAATTGTGTaGGCTTGGGAATATTACTTAAATGCTTTGTATCTT +
Preference number: 3 (lower is better)
Translates to: RIEYWLYPIAIV*AWEYYLNALYL
Trigger: AAGATACAAAGCATTTAAGTAATATTCCCAAGCTCACACAATTGCTATGGGGTAGAGCCAATATTCTATCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CCA 72 bp ATGATAAAACTTGAACAGATGATAAGTTGCTTCTTATaGGTGGGCAAGGAAAGTAGTTTCTTGACAATCTCA +
Preference number: 3 (lower is better)
Translates to: MIKLEQMISCFL*VGKESSFLTIS
Trigger: TGAGATTGTCAAGAAACTACTTTCCTTGCCCACCCATAAGAAGCAACTTATCATCTGTTCAAGTTTTATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CCA 72 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTaGATGGTAGCACATCCGTTTATAGGAAGGTTTACT +
Preference number: 3 (lower is better)
Translates to: IMFLLYKRNHKA*MVAHPFIGRFT
Trigger: AGTAAACCTTCCTATAAACGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR TCA 72 bp ACAACAATTTTACAATACTGTTGCAGACATTACTGTTaGGTGATAACGCATCATTTATCTCTTCTGATTCCG +
Preference number: 3 (lower is better)
Translates to: TTILQYCCRHYC*VITHHLSLLIP
Trigger: CGGAATCAGAAGAGATAAATGATGCGTTATCACTCAACAGTAATGTCTGCAACAGTATTGTAAAATTGTTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR TCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTGGTGGGAGGACCACTTaGGCCCAGAGGCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLGGRTT*AQRLEA
Trigger: AGCCTCCAGCCTCTGGGCTCAAGTGGTCCTCCCACC...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCGGCTGGAGGCTGCAGTaGGATGAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFGWRLQ*DEIVPL
Trigger: CAGTGGCACAATCTCATCTCACTGCAGCCTCCAGCC...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTGGTGGGAGGACCACTTaGGCCCAGAGGCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTGGRTT*AQRLEA
Trigger: AGCCTCCAGCCTCTGGGCTCAAGTGGTCCTCCCACC...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCTCCGGAGCGAGGTTTTaGGCAGCGTCGCGATGTCAG +
Preference number: 4 (lower is better)
Translates to: NTILSQSLTQSKALSLQFSGARF*AASRCQ
Trigger: CTGACATCGCGACGCTGCTCAAAACCTCGCTCCGGA...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAGCGATGTCAGACCGCTaGGTGTCCAGATCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLAMSDR*VSRSAA
Trigger: AGCGGCGGATCTGGACACCCAGCGGTCTGACATCGC...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTGCGATGTCAGACCGCTaGGTGTCCAGATCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTAMSDR*VSRSAA
Trigger: AGCGGCGGATCTGGACACCCAGCGGTCTGACATCGC...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTACTCCTGGGCTCAAGTaGTCCTCCCGCCTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTTPGLK*SSRLSL
Trigger: GAGACTCAGGCGGGAGGATCACTTGAGCCCAGGAGT...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAACTCCTGGGCTCAAGTaGTCCTCCCGCCTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTTPGLK*SSRLSL
Trigger: GAGACTCAGGCGGGAGGATCACTTGAGCCCAGGAGT...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTAGGGAGTTCAAGAACTaGATGACTGGCTGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLREFKN*MTGWRS
Trigger: CGACCTCCAGCCAGTCATTCAGTTCTTGAACTCCCT...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCGGTGGATGGATCGCCTaGGTTCAAGACTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFGGWIA*VQDFKT
Trigger: GGTTTTGAAGTCTTGAACTCAGGCGATCCATCCACC...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTGGGTCTCCAGCCTGCTaGCTGAAGATCATGAGACTT +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLGSPAC*LKIMRL
Trigger: AAGTCTCATGATCTTCAGTCAGCAGGCTGGAGACCC...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTTTCCAACTGCTCCACTaGCCATTCCCCATCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLFQLLH*PFPISL
Trigger: GAGAGAGATGGGGAATGGCCAGTGGAGCAGTTGGAA...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCCCAGGTGTGGTGTGGTaGCACATGCCTGTAGACCCA +
Preference number: 4 (lower is better)
Translates to: NTILSQSLTQSKALSLQFPGVVW*HMPVDP
Trigger: TGGGTCTACAGGCATGTGCCACCACACCACACCTGG...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CAA 72 bp TTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTaGAACTACACCATTGGCATTCCTGGGTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LVFLVLNPLDSD*NYTIGIPGSPA
Trigger: GGCTGGAGACCCAGGAATGCCAATGGTGTAGTTCAAGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCTTGTGTCCCGTGAGTTaGCCTTTGCAAGTATCCTCA +
Preference number: 4 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFLCPVS*PLQVSS
Trigger: TGAGGATACTTGCAAAGGTCAACTCACGGGACACAA...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCCCTTTGGTGTACCACTaGAGGAGACTCCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFPLVYH*RRLHFS
Trigger: ACTGAAATGGAGTCTCCTTCAGTGGTACACCAAAGG...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTGTTTATTTAATGTGTTaGCTGGGCCACAGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLVYLMC*LGHRVP
Trigger: GGGCACCCTGTGGCCCAGTCAACACATTAAATAAAC...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCGAAGTAGGAAGGGACTaGCAGCCAGATGTAATCCTA +
Preference number: 4 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFEVGRD*QPDVIL
Trigger: TAGGATTACATCTGGCTGGCAGTCCCTTCCTACTTC...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGAGCCTCCCCAGTAGCTaGGAACACAGGTGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKSLPSS*EHRCVH
Trigger: GTGCACACACCTGTGTTCCCAGCTACTGGGGAGGCT...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTAACAGGCAACCTGGGTaGACTGACTGTACCATACTC +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLNRQPG*TDCTIL
Trigger: GAGTATGGTACAGTCAGTCCACCCAGGTTGCCTGTT...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGTCCGGAGCGAGGTTTTaGGCAGCGTCGCGATGTCAG +
Preference number: 4 (lower is better)
Translates to: CPDMWSNIILGISMRVFLSGARF*AASRCQ
Trigger: CTGACATCGCGACGCTGCTCAAAACCTCGCTCCGGA...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTTTGTGTCCCGTGAGTTaGCCTTTGCAAGTATCCTCA +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLLCPVS*PLQVSS
Trigger: TGAGGATACTTGCAAAGGTCAACTCACGGGACACAA...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCGATGCCAGTGGCAGCTaGAGCACCTTTAGTTTCTCG +
Preference number: 4 (lower is better)
Translates to: NTILSQSLTQSKALSLQFDASGS*STFSFS
Trigger: CGAGAAACTAAAGGTGCTTCAGCTGCCACTGGCATC...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCCAACCACCATCCTGGTaGGTATCTATCAAAATGAGG +
Preference number: 4 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFQPPSW*VSIKMR
Trigger: CCTCATTTTGATAGATACTCACCAGGATGGTGGTTG...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTACTACAAGTGGAGCCTaGAGATGTGTCTGGATTGCT +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLTTSGA*RCVWIA
Trigger: AGCAATCCAGACACATCTTCAGGCTCCACTTGTAGT...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCTGTTACTGTTTTGTTTaGGGGCACAGACGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFCYCFV*GHRRVC
Trigger: ACACACACGTCTGTGCCCTCAAACAAAACAGTAACA...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCAGTGGATGGCTTAAGTaGATGGGGATTTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFSGWLK*MGIWFP
Trigger: AGGAAACCAAATCCCCATTCACTTAAGCCATCCACT...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp CATCATTTATCTCTTCTGATTCCGACTTCTGACTCAGATTACACATGGTCCAATGCGATGTCAGACCGCTaGGTGTCCAGATCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: HHLSLLIPTSDSDYTWSNAMSDR*VSRSAA
Trigger: AGCGGCGGATCTGGACACCCAGCGGTCTGACATCGC...ATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAATCAGAAGAGATAAATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR CCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCAGTAGAAGGACCCCTTaGCCATGTTCCATCTTCATT +
Preference number: 4 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFSRRTP*PCSIFI
Trigger: AATGAAGATGGAACATGGCCAAGGGGTCCTTCTACT...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTGGCAACCACCTTATCTaGCCTTCCATCTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLGNHLI*PSICIF
Trigger: AAAGATGCAGATGGAAGGCCAGATAAGGTGGTTGCC...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GTGATAACGCATCATTTATCTCTTCTGATTCCGACTTCTGACTCAGATTACACATCCGGAGCGAGGTTTTaGGCAGCGTCGCGATGTCAG +
Preference number: 4 (lower is better)
Translates to: VITHHLSLLIPTSDSDYTSGARF*AASRCQ
Trigger: CTGACATCGCGACGCTGCTCAAAACCTCGCTCCGGA...TGTGTAATCTGAGTCAGAAGTCGGAATCAGAAGAGATAAATGATGCGTTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR TCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTTCCTTCTCACTCCTCTaGTATTTTAGAGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLSFSLL*YFRGPL
Trigger: CAGAGGTCCTCTAAAATATCAGAGGAGTGAGAAGGA...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAAGTTCAAGAACTGAATaGCTGGCTGGAGGTCGCGGT +
Preference number: 4 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLSSRTE*LAGGRG
Trigger: ACCGCGACCTCCAGCCAGTCATTCAGTTCTTGAACT...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCGATGTAGTGACTATCTaGGTTGTCTCCAGACTTTGT +
Preference number: 4 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFDVVTI*VVSRLC
Trigger: ACAAAGTCTGGAGACAACTCAGATAGTCACTACATC...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCAGCAGGATAATGGACTaGAGTAGGAAGGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: NTILSQSLTQSKALSLQFSRIMD*SRKGLP
Trigger: TGGCAGTCCCTTCCTACTTCAGTCCATTATCCTGCT...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTAGTGGATGGCTTAAGTaGATGGGGATTTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLSGWLK*MGIWFP
Trigger: AGGAAACCAAATCCCCATTCACTTAAGCCATCCACT...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAGCAACCTGGGTGGACTaGCTGTACCATACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTATWVD*LYHTLC
Trigger: GCAAAGAGTATGGTACAGTCAGTCCACCCAGGTTGC...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAGCAACCTGGGTGGACTaGCTGTACCATACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLATWVD*LYHTLC
Trigger: GCAAAGAGTATGGTACAGTCAGTCCACCCAGGTTGC...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAGCATCCTGAATGGTaGTGTCTGGTTTATTCAGTG +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLQHPEW*CLVYSV
Trigger: CACTGAATAAACCAGACAGCACCATTCAGGATGCTG...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCAATTTGGTCTTCAGATaGAGTGGAGACACTACTGTC +
Preference number: 4 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFNLVFR*SGDTTV
Trigger: GACAGTAGTGTCTCCACTGCATCTGAAGACCAAATT...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp ACACCTTCACACTTCAAGCCCAGTCCCAAGATGCCACTGTGCCATTCCAGGAATAATTTGGTCTTCAGATaGAGTGGAGACACTACTGTC +
Preference number: 4 (lower is better)
Translates to: TPSHFKPSPKMPLCHSRNNLVFR*SGDTTV
Trigger: GACAGTAGTGTCTCCACTGCATCTGAAGACCAAATT...ATTCCTGGAATGGCACAGTGGCATCTTGGGACTGGGCTTGAAGTGTGAAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549415.1
CDS-3UTR GCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCTGCCGCAGTATTTATaGCACATTGATACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLLPQYL*HIDTAA
Trigger: AGCTGCAGTATCAATGTGGCATAAATACTGCGGCAG...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGCTGCTCATTGACAAGTaGACCTGGTCACCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKLLIDK*TWSPKS
Trigger: GCTCTTGGGTGACCAGGTGCACTTGTCAATGAGCAG...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGGCGATGTCAGACCGCTaGGTGTCCAGATCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRAMSDR*VSRSAA
Trigger: AGCGGCGGATCTGGACACCCAGCGGTCTGACATCGC...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR CCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAAGAGAACTACAAGTaGAGCCTGAAGATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLQENYK*SLKMCL
Trigger: CAGACACATCTTCAGGCTCCACTTGTAGTTCTCTTG...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCAAAATTAGCCAGGTGTaGTGTGGTGGCACATGCCTG +
Preference number: 4 (lower is better)
Translates to: NTILSQSLTQSKALSLQFKISQV*CGGTCL
Trigger: CAGGCATGTGCCACCACACCACACCTGGCTAATTTT...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTAACATTCAGTCTTCCTaGGTCTTTAGCCAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLNIQSS*VFSQVA
Trigger: AGCTACCTGGCTAAAGACCCAGGAAGACTGAATGTT...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCACTTATAGCCCAAGGTaGCAGTTGATGTCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFTYSPR*QLMSED
Trigger: ATCTTCTGACATCAACTGCCACCTTGGGCTATAAGT...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TACTCAAGGTTAACACACCTTCACACTTCAAGCCCAGTCCCAAGATGCCACTGTAGCAGACTTCCCTTCTaGACTCACTGGCCTTTAATG +
Preference number: 4 (lower is better)
Translates to: YSRLTHLHTSSPVPRCHCSRLPF*THWPLM
Trigger: CATTAAAGGCCAGTGAGTCCAGAAGGGAAGTCTGCT...ACAGTGGCATCTTGGGACTGGGCTTGAAGTGTGAAGGTGTGTTAACCTTGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549415.1
CDS-3UTR TCA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGTCCGGAGCGAGGTTTTaGGCAGCGTCGCGATGTCAG +
Preference number: 4 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRSGARF*AASRCQ
Trigger: CTGACATCGCGACGCTGCTCAAAACCTCGCTCCGGA...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR TCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCATTATCTCCTCCAACTaGATCTTCAGACTGACTGTT +
Preference number: 4 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFIISSN*IFRLTV
Trigger: AACAGTCAGTCTGAAGATTCAGTTGGAGGAGATAAT...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ACACCTTCACACTTCAAGCCCAGTCCCAAGATGCCACTGTGCCATTCCAGGAATTTCTTTGTGGCTTGCTaGTGTTCTTTACAATTCGGA +
Preference number: 4 (lower is better)
Translates to: TPSHFKPSPKMPLCHSRNFFVAC*CSLQFG
Trigger: TCCGAATTGTAAAGAACATCAGCAAGCCACAAAGAA...ATTCCTGGAATGGCACAGTGGCATCTTGGGACTGGGCTTGAAGTGTGAAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549415.1
CDS-3UTR TCA 90 bp CACACCTTCACACTTCAAGCCCAGTCCCAAGATGCCACTGTGCCATTCCAGGAATGTAAGAAAATCGCTTaGGATGTACTACAAGTACTG +
Preference number: 4 (lower is better)
Translates to: HTFTLQAQSQDATVPFQECKKIA*DVLQVL
Trigger: CAGTACTTGTAGTACATCTCAAGCGATTTTCTTACA...TTCCTGGAATGGCACAGTGGCATCTTGGGACTGGGCTTGAAGTGTGAAGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549415.1
CDS-3UTR TCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCGATGCCAGTGGCAGCTaGAGCACCTTTAGTTTCTCG +
Preference number: 4 (lower is better)
Translates to: ISEACLYPQLLLNISAMGDASGS*STFSFS
Trigger: CGAGAAACTAAAGGTGCTTCAGCTGCCACTGGCATC...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCCGAACCTGCAATATCTaGGGCATGCCTGTACCCACA +
Preference number: 4 (lower is better)
Translates to: ISEACLYPQLLLNISAMGRTCNI*GMPVPT
Trigger: TGTGGGTACAGGCATGCCTCAGATATTGCAGGTTCG...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCGTGAGGAAAGCATGTTaGAAGCCAAGGCAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: NTILSQSLTQSKALSLQFVRKAC*KPRQAE
Trigger: TTCAGCTTGCCTTGGCTTTCAACATGCTTTCCTCAC...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACACCTCCTCTGCTACCATaGAAGAACACAGTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTPPLLP*KNTVRR
Trigger: CCTTCTCACTGTGTTCTTGCATGGTAGCAGAGGAGG...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp CATCATTTATCTCTTCTGATTCCGACTTCTGACTCAGATTACACATGGTCCAATAGCTGCACTGCACCGTaGCAAGGAGGGCCTATCACA +
Preference number: 4 (lower is better)
Translates to: HHLSLLIPTSDSDYTWSNSCTAP*QGGPIT
Trigger: TGTGATAGGCCCTCCTTGGCACGGTGCAGTGCAGCT...ATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAATCAGAAGAGATAAATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR CCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCGGCAACCACCTTATCTaGCCTTCCATCTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: NTILSQSLTQSKALSLQFGNHLI*PSICIF
Trigger: AAAGATGCAGATGGAAGGCCAGATAAGGTGGTTGCC...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGACCCTACACTCCCTTTaGTGTACCACTGAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKTLHSL*CTTEGD
Trigger: GTCTCCTTCAGTGGTACACCAAAGGGAGTGTAGGGT...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCTTAGGAATTCAGGTGTaGCTTGCTGAGAACCTCTGG +
Preference number: 4 (lower is better)
Translates to: NTILSQSLTQSKALSLQFLGIQV*LAENLW
Trigger: CCAGAGGTTCTCAGCAAGCCACACCTGAATTCCTAA...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGCACCATTGGCATTCCTaGGTCTCCAGCCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: CPDMWSNIILGISMRVFLHHWHS*VSSLLT
Trigger: AGTCAGCAGGCTGGAGACCCAGGAATGCCAATGGTG...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAAACAGGCAACCTGGGTaGACTGACTGTACCATACTC +
Preference number: 4 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLNRQPG*TDCTIL
Trigger: GAGTATGGTACAGTCAGTCCACCCAGGTTGCCTGTT...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CAA 72 bp TGCAGTTTTAAGTCACATTGTTCCCTTCTAATCAGGTaGCTCACCCCAAGCCTTCCTAGATGGACATTCGGG +
Preference number: 4 (lower is better)
Translates to: CSFKSHCSLLIR*LTPSLPRWTFG
Trigger: CCCGAATGTCCATCTAGGAAGGCTTGGGGTGAGCAACCTGATTAGAAGGGAACAATGTGACTTAAAACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CAA 72 bp GTGGCAGTTGATGTCAGAAGATCTAGCAAGTGCATTTaGGAGCAAGTCTTGAAGGAGTGTAGGAGTTCGCCA +
Preference number: 4 (lower is better)
Translates to: VAVDVRRSSKCI*EQVLKECRSSP
Trigger: TGGCGAACTCCTACACTCCTTCAAGACTTGCTCCAAAATGCACTTGCTAGATCTTCTGACATCAACTGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTACGTGCTATTGGCTCTTaGCCTTCCATCAATGTGTAC +
Preference number: 4 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLRAIGS*PSINVY
Trigger: GTACACATTGATGGAAGGTCAAGAGCCAATAGCACG...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTGCTGTAAGGCTATGGTaGATTCCATCAGGAACACAC +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTAVRLW*IPSGTH
Trigger: GTGTGTTCCTGATGGAATTCACCATAGCCTTACAGC...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAGACTCTACAACAGTaGTTGGTACACAAACATATG +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLQTLQQ*LVHKHM
Trigger: CATATGTTTGTGTACCAATCACTGTTGTAGAGTCTG...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTTATGAAAAATGGGGATaGCAACTATCCCTACCTCAT +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLYEKWG*QLSLPH
Trigger: ATGAGGTAGGGATAGTTGTCATCCCCATTTTTCATA...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACACCTTTGGTGTACCACTaGAGGAGACTCCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTPLVYH*RRLHFS
Trigger: ACTGAAATGGAGTCTCCTTCAGTGGTACACCAAAGG...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACATCTATTTCACAACCCTaGCAAGTTCCAGGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTSISQP*QVPGSQ
Trigger: TTGGGAGCCTGGAACTTGTCAGGGTTGTGAAATAGA...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAGTGAGGAAAGCATGTTaGAAGCCAAGGCAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLVRKAC*KPRQAE
Trigger: TTCAGCTTGCCTTGGCTTTCAACATGCTTTCCTCAC...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCAGGTGGTTTAACTCCTaGGCCTATGGTCCAAACCAC +
Preference number: 4 (lower is better)
Translates to: ISEACLYPQLLLNISAMGRWFNS*AYGPNH
Trigger: GTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCT...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CCAGGAAGCATTGAGATAAATACTACAGGTAGAGTAGAGGGACTGTCCTTAAATGAAGACAGTTTAGGTTaGGGGGATGGGAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PGSIEINTTGRVEGLSLNEDSLG*GDGRRR
Trigger: CCTCCTTCTCCCATCCCCTCAACCTAAACTGTCTTC...ATTTAAGGACAGTCCCTCTACTCTACCTGTAGTATTTATCTCAATGCTTCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR GCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCGTGATTTCGGCTAACTaGGGCCTTGACTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSVISAN*GLDCLG
Trigger: GCCCAGGCAGTCAAGGCCGCAGTTAGCCGAAATCAC...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCCCTCCTCTGCTACCATaGAAGAACACAGTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ISEACLYPQLLLNISAMGPPLLP*KNTVRR
Trigger: CCTTCTCACTGTGTTCTTGCATGGTAGCAGAGGAGG...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCGTCTTTTCCTGCCTTTaGACTAAAACTGAAACATTC +
Preference number: 4 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFVFSCL*TKTETF
Trigger: GAATGTTTCAGTTTTAGTGCAAAGGCAGGAAAAGAC...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCGTTCTTGATCCTGGCTaGATTCATCATCTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: NTILSQSLTQSKALSLQFVLDPG*IHHLAH
Trigger: ATGAGCCAGATGATGAATCCAGCCAGGATCAAGAAC...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCAGCCTCCCCAGTAGCTaGGAACACAGGTGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSSLPSS*EHRCVH
Trigger: GTGCACACACCTGTGTTCCCAGCTACTGGGGAGGCT...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGTTAGGAATTCAGGTGTaGCTTGCTGAGAACCTCTGG +
Preference number: 4 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKLGIQV*LAENLW
Trigger: CCAGAGGTTCTCAGCAAGCCACACCTGAATTCCTAA...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGCACCATTGGCATTCCTaGGTCTCCAGCCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPHHWHS*VSSLLT
Trigger: AGTCAGCAGGCTGGAGACCCAGGAATGCCAATGGTG...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTTATCATTGGTTTTCCTaGTTCTCAACCCTTTGGACT +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLYHWFS*FSTLWT
Trigger: AGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATA...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGCCAAGCCTTCCTAGATaGACATTCGGGAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CPDMWSNIILGISMRVFLPSLPR*TFGSCS
Trigger: AGAGCAGCTCCCGAATGTCCATCTAGGAAGGCTTGG...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CAA 72 bp TTTAGCCAGGTAGCTTGTGGACTGGAACTTTTATCATaGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGAC +
Preference number: 4 (lower is better)
Translates to: FSQVACGLELLS*VFLVLNPLDSD
Trigger: GTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTCCACAAGCTACCTGGCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCCGTGCTATTGGCTCTTaGCCTTCCATCAATGTGTAC +
Preference number: 4 (lower is better)
Translates to: ISEACLYPQLLLNISAMGRAIGS*PSINVY
Trigger: GTACACATTGATGGAAGGTCAAGAGCCAATAGCACG...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAAACACTGAATAGCTaGGTTCATGAAACACGTATT +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLQTLNS*VHETRI
Trigger: AATACGTGTTTCATGAACTCAGCTATTCAGTGTTTG...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGGGGCTGACCAAAAAGTaGAGAACCAGTATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: CPDMWSNIILGISMRVFLGLTKK*RTSMVG
Trigger: ACCCACCATACTGGTTCTTCACTTTTTGGTCAGCCC...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGAGTTCAAGAACTGAATaGCTGGCTGGAGGTCGCGGT +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILSSRTE*LAGGRG
Trigger: ACCGCGACCTCCAGCCAGTCATTCAGTTCTTGAACT...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGAGGGAGTTCAAGAACTaGATGACTGGCTGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPREFKN*MTGWRS
Trigger: CGACCTCCAGCCAGTCATTCAGTTCTTGAACTCCCT...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGCGAACCTGCAATATCTaGGGCATGCCTGTACCCACA +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILRTCNI*GMPVPT
Trigger: TGTGGGTACAGGCATGCCTCAGATATTGCAGGTTCG...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGAGCAGGATAATGGACTaGAGTAGGAAGGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: CPDMWSNIILGISMRVFLSRIMD*SRKGLP
Trigger: TGGCAGTCCCTTCCTACTTCAGTCCATTATCCTGCT...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGGGGTCTCCAGCCTGCTaGCTGAAGATCATGAGACTT +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILGSPAC*LKIMRL
Trigger: AAGTCTCATGATCTTCAGTCAGCAGGCTGGAGACCC...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGTTTAAGTCAGTAGACTaGGTAAGGCAGATTGCCCTC +
Preference number: 4 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKFKSVD*VRQIAL
Trigger: GAGGGCAATCTGCCTTACTCAGTCTACTGACTTAAA...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCTCCAGAGAACTGAGGTaGAAAACGTCCTACCTGTGT +
Preference number: 4 (lower is better)
Translates to: ISEACLYPQLLLNISAMGSRELR*KTSYLC
Trigger: ACACAGGTAGGACGTTTTGCACCTCAGTTCTCTGGA...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTGTAGAAGAGTACATATaGTGCTTTGGACACAATTTG +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLVEEYI*CFGHNL
Trigger: CAAATTGTGTCCAAAGCAGCATATGTACTCTTCTAC...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTGTGATTTCGGCTAACTaGGGCCTTGACTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSVISAN*GLDCLG
Trigger: GCCCAGGCAGTCAAGGCCGCAGTTAGCCGAAATCAC...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCTTGCACAGGCTGGAGTaGAGGGGTGTGATTTCGGCT +
Preference number: 4 (lower is better)
Translates to: GVDGLSEWGFGFLININSLHRLE*RGVISA
Trigger: AGCCGAAATCACACCCCTGCACTCCAGCCTGTGCAA...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp ATAAATTTGAAAATGCGGTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATTTGCACAGGCTGGAGTaGAGGGGTGTGATTTCGGCT +
Preference number: 4 (lower is better)
Translates to: INLKMRFSKNAAAVFMPHLHRLE*RGVISA
Trigger: AGCCGAAATCACACCCCTGCACTCCAGCCTGTGCAA...ATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAACCGCATTTTCAAATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCTGCTACATTATAGGCTaGCAAAGACATGTAGTTATT +
Preference number: 4 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFCYIIG*QRHVVI
Trigger: AATAACTACATGTCTTTGGCAGCCTATAATGTAGCA...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCAGAGGTGAGGTGAGTTaGACAAAAGTGGTAGGCTCA +
Preference number: 4 (lower is better)
Translates to: ISEACLYPQLLLNISAMGRGEVS*TKVVGS
Trigger: TGAGCCTACCACTTTTGTGCAACTCACCTCACCTCT...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp AAAAGAATATACTCAAGGTTAACACACCTTCACACTTCAAGCCCAGTCCCAAGACCCAAGATGCCACTGTaGCATTCCAGGAATCACATG +
Preference number: 4 (lower is better)
Translates to: KRIYSRLTHLHTSSPVPRPKMPL*HSRNHM
Trigger: CATGTGATTCCTGGAATGGCACAGTGGCATCTTGGG...TCTTGGGACTGGGCTTGAAGTGTGAAGGTGTGTTAACCTTGAGTATATTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549415.1
CDS-3UTR CCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCATATGTTTCCAATTTTaGGGACAACCACTTTGTACT +
Preference number: 4 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFICFQF*GQPLCT
Trigger: AGTACAAAGTGGTTGTCCCCAAAATTGGAAACATAT...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGTTCTTGATCCTGGCTaGATTCATCATCTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKVLDPG*IHHLAH
Trigger: ATGAGCCAGATGATGAATCCAGCCAGGATCAAGAAC...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGATTCAGGGTTGCATTTaGGGAAATGGAAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKIQGCI*GNGKKG
Trigger: CCCCTTCTTTCCATTTCCCCAAATGCAACCCTGAAT...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAAGGTCGCGGTCTTTTTaGGGAAATGAGTTAAACAGG +
Preference number: 4 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTRSRSF*GNELNR
Trigger: CCTGTTTAACTCATTTCCCCAAAAAGACCGCGACCT...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCAAGGATTTGCTATTCTaGATGCCATTCATTCAGAAT +
Preference number: 4 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFKDLLF*MPFIQN
Trigger: ATTCTGAATGAATGGCATCCAGAATAGCAAATCCTT...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTCCAGGTGTGGTGTGGTaGCACATGCCTGTAGACCCA +
Preference number: 4 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSPGVVW*HMPVDP
Trigger: TGGGTCTACAGGCATGTGCCACCACACCACACCTGG...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGAATGTGGGACAAATGTaGGAAAGCCCCATTGTCAAG +
Preference number: 4 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKNVGQM*ESPIVK
Trigger: CTTGACAATGGGGCTTTCCCACATTTGTCCCACATT...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CAA 72 bp TGTGGGAAAGCCCCATTGTCAAGTAGTATGACATGTTaGAGGGCAAGTGAGGAATTAGATGAGGGCAAATTC +
Preference number: 4 (lower is better)
Translates to: CGKAPLSSSMTC*RASEELDEGKF
Trigger: GAATTTGCCCTCATCTAATTCCTCACTTGCCCTCAAACATGTCATACTACTTGACAATGGGGCTTTCCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCGGGCATCACCATCTTTaGGAAGTCCAGAGTTATCAA +
Preference number: 4 (lower is better)
Translates to: ISEACLYPQLLLNISAMGGHHHL*EVQSYQ
Trigger: TTGATAACTCTGGACTTCTCAAAGATGGTGATGCCC...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCTCAATGTGTACCAGCTaGCAAGTTTATTCCAACCTT +
Preference number: 4 (lower is better)
Translates to: NTILSQSLTQSKALSLQFSMCTS*QVYSNL
Trigger: AAGGTTGGAATAAACTTGTCAGCTGGTACACATTGA...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGCAGACCACATTTGCTTaGTCAGTTCGGCATAAGATT +
Preference number: 4 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKQTTFA*SVRHKI
Trigger: AATCTTATGCCGAACTGATCAAGCAAATGTGGTCTG...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTACAGACCACATTTGCTTaGTCAGTTCGGCATAAGATT +
Preference number: 4 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLQTTFA*SVRHKI
Trigger: AATCTTATGCCGAACTGATCAAGCAAATGTGGTCTG...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGGGGCTGACCAAAAAGTaGAGAACCAGTATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILGLTKK*RTSMVG
Trigger: ACCCACCATACTGGTTCTTCACTTTTTGGTCAGCCC...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAACTGTTTTCATTCTCTaGGGGAAGTTCTTGATCCTG +
Preference number: 4 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLTVFIL*GKFLIL
Trigger: CAGGATCAAGAACTTCCCTCAGAGAATGAAAACAGT...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCCTTGCAGCTGAAAAATaGCATTTGAGTTTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: NTILSQSLTQSKALSLQFLAAEK*HLSLAV
Trigger: AACTGCCAAACTCAAATGTCATTTTTCAGCTGCAAG...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCTATGAAAAATGGGGATaGCAACTATCCCTACCTCAT +
Preference number: 4 (lower is better)
Translates to: NTILSQSLTQSKALSLQFYEKWG*QLSLPH
Trigger: ATGAGGTAGGGATAGTTGTCATCCCCATTTTTCATA...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTGATGTAGTGACTATCTaGGTTGTCTCCAGACTTTGT +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTDVVTI*VVSRLC
Trigger: ACAAAGTCTGGAGACAACTCAGATAGTCACTACATC...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCTTAGTACTGGTTAAATaGAAATACATGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: NTILSQSLTQSKALSLQFLVLVK*KYMARC
Trigger: GCACCTGGCCATGTATTTTCATTTAACCAGTACTAA...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACATTCTGGGCATATCTATaGGGGTGTTTTTGGATGAGA +
Preference number: 4 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTFWAYL*GCFWMR
Trigger: TCTCATCCAAAAACACCCTCATAGATATGCCCAGAA...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTGAGTATGAATCGTATTaGACAGAGAGCTGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTEYESY*TESCSH
Trigger: ATGAGAGCAGCTCTCTGTTCAATACGATTCATACTC...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCACAGGAATAATCACGTaGTCTGTATCTTCTGTCCTA +
Preference number: 4 (lower is better)
Translates to: NTILSQSLTQSKALSLQFTGIIT*SVSSVL
Trigger: TAGGACAGAAGATACAGAGCACGTGATTATTCCTGT...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTGTTTTCGAAGAATGCTaGCGCAGTATTTATGCCACA +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTVFEEC*RSIYAT
Trigger: TGTGGCATAAATACTGCGGCAGCATTCTTCGAAAAC...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCAATAAAGCACCAGGCTaGAACTTTTTCAAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: NTILSQSLTQSKALSLQFNKAPG*NFFKEV
Trigger: AACCTCCTTGAAAAAGTTGCAGCCTGGTGCTTTATT...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGAACAGATGATAAGTTaGTTCTTATGGGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKEQMIS*FLWVGK
Trigger: CTTGCCCACCCATAAGAAGCAACTTATCATCTGTTC...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCAGAAGATCTAGCAAGTaGATTTTGGAGCAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: NTILSQSLTQSKALSLQFRRSSK*ILEQVL
Trigger: CAAGACTTGCTCCAAAATGCACTTGCTAGATCTTCT...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTTGTTCCTTAAGTGACTaGGCATCACCATCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTCSLSD*ASPSLR
Trigger: TCTCAAAGATGGTGATGCCCAGTCACTTAAGGAACA...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGAACCAGCATCCTGAATaGTGCTGTCTGGTTTATTCA +
Preference number: 4 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKNQHPE*CCLVYS
Trigger: TGAATAAACCAGACAGCACCATTCAGGATGCTGGTT...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAAACCAGCATCCTGAATaGTGCTGTCTGGTTTATTCA +
Preference number: 4 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLNQHPE*CCLVYS
Trigger: TGAATAAACCAGACAGCACCATTCAGGATGCTGGTT...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACATGTCTTAAAGGCTCTTaGGGTGACGTAGCTAAACTT +
Preference number: 4 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTCLKGS*GDVAKL
Trigger: AAGTTTAGCTACGTCACCCCAAGAGCCTTTAAGACA...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTTCTGAAGAATTAGGATaGAGACCACAATATAGGTTT +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLSEELG*RPQYRF
Trigger: AAACCTATATTGTGGTCTCCATCCTAATTCTTCAGA...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAATTTTAGAGGACCTCTaGTTCCTTCCCCTAGTCTAT +
Preference number: 4 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLILEDL*FLPLVY
Trigger: ATAGACTAGGGGAAGGAACCAGAGGTCCTCTAAAAT...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTTTATTTAAATATTTATaGTGGCTGGGAACCGAACCT +
Preference number: 4 (lower is better)
Translates to: SHNTILSQSLTQSKALSLLFKYL*WLGTEP
Trigger: AGGTTCGGTTCCCAGCCACCATAAATATTTAAATAA...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCCAAGAGAACTACAAGTaGAGCCTGAAGATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: ISEACLYPQLLLNISAMGQENYK*SLKMCL
Trigger: CAGACACATCTTCAGGCTCCACTTGTAGTTCTCTTG...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCTTCCAACTGCTCCACTaGCCATTCCCCATCTCTCTC +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSFQLLH*PFPISL
Trigger: GAGAGAGATGGGGAATGGCCAGTGGAGCAGTTGGAA...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGCTTGAACTACACCATTaGCATTCCTGGGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPLELHH*HSWVSS
Trigger: GCTGGAGACCCAGGAATGCCAATGGTGTAGTTCAAG...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGCTTGAACTACACCATTaGCATTCCTGGGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILLELHH*HSWVSS
Trigger: GCTGGAGACCCAGGAATGCCAATGGTGTAGTTCAAG...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCTATCATTGGTTTTCCTaGTTCTCAACCCTTTGGACT +
Preference number: 4 (lower is better)
Translates to: NTILSQSLTQSKALSLQFYHWFS*FSTLWT
Trigger: AGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATA...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TACTCAAGGTTAACACACCTTCACACTTCAAGCCCAGTCCCAAGATGCCACTGTACAATGCAAAGCTTGTaGGCTTTAGGGATAAAAGTA +
Preference number: 4 (lower is better)
Translates to: YSRLTHLHTSSPVPRCHCTMQSL*ALGIKV
Trigger: TACTTTTATCCCTAAAGCCCACAAGCTTTGCATTGT...ACAGTGGCATCTTGGGACTGGGCTTGAAGTGTGAAGGTGTGTTAACCTTGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549415.1
3UTR CAA 72 bp GAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTaGGACTCGGACTTGAACTACACCATTGGCATTCCT +
Preference number: 4 (lower is better)
Translates to: ELLSLVFLVLNP*DSDLNYTIGIP
Trigger: AGGAATGCCAATGGTGTAGTTCAAGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATTCCGACTTCTGACTCAGATTACACATGGTCCAATCTAGCTAACATTTGTGGAGGGCATCACCATCTTTaGGAAGTCCAGAGTTATCAA +
Preference number: 4 (lower is better)
Translates to: IPTSDSDYTWSNLANICGGHHHL*EVQSYQ
Trigger: TTGATAACTCTGGACTTCTCAAAGATGGTGATGCCC...TCCACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR TCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAGTGTTGCTCAAACACTaGATAGCTGAGTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLVLLKH*IAEFMK
Trigger: TTTCATGAACTCAGCTATTCAGTGTTTGAGCAACAC...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCACTGTTTTCATTCTCTaGGGGAAGTTCTTGATCCTG +
Preference number: 4 (lower is better)
Translates to: ISEACLYPQLLLNISAMGTVFIL*GKFLIL
Trigger: CAGGATCAAGAACTTCCCTCAGAGAATGAAAACAGT...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAACTGAATCTTCAGACTaGCTGTTTTCATTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTTESSD*LFSFSE
Trigger: CTCAGAGAATGAAAACAGTCAGTCTGAAGATTCAGT...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTACTGAATCTTCAGACTaGCTGTTTTCATTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTTESSD*LFSFSE
Trigger: CTCAGAGAATGAAAACAGTCAGTCTGAAGATTCAGT...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTATTCTTTGTGGCTTGCTaGTGTTCTTTACAATTCGGA +
Preference number: 4 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLFFVAC*CSLQFG
Trigger: TCCGAATTGTAAAGAACATCAGCAAGCCACAAAGAA...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTTTCTTTGTGGCTTGCTaGTGTTCTTTACAATTCGGA +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTFFVAC*CSLQFG
Trigger: TCCGAATTGTAAAGAACATCAGCAAGCCACAAAGAA...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGAGTTTACAAAGTCCTaGAATTCAGGGTTGCATTTG +
Preference number: 4 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKEFTKS*NSGLHL
Trigger: CAAATGCAACCCTGAATTTCAGGACTTTGTAAACTC...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACACGACAGCTTCAAAAATaGAATTTAAGCCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTRQLQK*NLSLPL
Trigger: GAGAGGAAGGCTTAAATTTCATTTTTGAAGCTGTCG...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACACTGGTGAAGATGCTGTaGACATTGTTGAAAAGACAA +
Preference number: 4 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTLVKML*TLLKRQ
Trigger: TTGTCTTTTCAACAATGTTCACAGCATCTTCACCAG...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTAAAGCCAAGGCAAGCTaGAAGCTAGGCCTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSKAKAS*KLGLLS
Trigger: GCTCAAGAGGCCTAGCTTTCAGCTTGCCTTGGCTTT...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACATTAGTACTGGTTAAATaGAAATACATGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTLVLVK*KYMARC
Trigger: GCACCTGGCCATGTATTTTCATTTAACCAGTACTAA...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCCTATTGAGTGCACCCTaGATACACACTTCTATTTTT +
Preference number: 4 (lower is better)
Translates to: NTILSQSLTQSKALSLQFLLSAP*IHTSIF
Trigger: AAAAATAGAAGTGTGTATTCAGGGTGCACTCAATAG...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATAAATTTGAAAATGCGGTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATAGGTGGTTTAACTCCTaGGCCTATGGTCCAAACCAC +
Preference number: 4 (lower is better)
Translates to: INLKMRFSKNAAAVFMPHRWFNS*AYGPNH
Trigger: GTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCT...ATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAACCGCATTTTCAAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATTCCGACTTCTGACTCAGATTACACATGGTCCAATCTAGCTAACATTTGTGGATCTGATTCCGACTTCTaGCTCAGATTACACATGGTC +
Preference number: 4 (lower is better)
Translates to: IPTSDSDYTWSNLANICGSDSDF*LRLHMV
Trigger: GACCATGTGTAATCTGAGTCAGAAGTCGGAATCAGA...TCCACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
CDS-3UTR GCA 90 bp ATTCCGACTTCTGACTCAGATTACACATGGTCCAATCTAGCTAACATTTGTGGATTCAACCACCTTTCGTaGTATTGGCTCTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: IPTSDSDYTWSNLANICGFNHLS*YWLLTF
Trigger: GAAGGTCAAGAGCCAATAGCACGAAAGGTGGTTGAA...TCCACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR GCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGTTCAACCACCTTTCGTaGTATTGGCTCTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: CPDMWSNIILGISMRVFLFNHLS*YWLLTF
Trigger: GAAGGTCAAGAGCCAATAGCACGAAAGGTGGTTGAA...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp GGCTTTAAAGAAAGCTTTATTGGAACACAGGCATTGCCATGTCTTGACATGATGCAGCATCCTGAATGGTaGTGTCTGGTTTATTCAGTG +
Preference number: 4 (lower is better)
Translates to: GFKESFIGTQALPCLDMMQHPEW*CLVYSV
Trigger: CACTGAATAAACCAGACAGCACCATTCAGGATGCTG...CATCATGTCAAGACATGGCAATGCCTGTGTTCCAATAAAGCTTTCTTTAAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552997.1
CDS-3UTR GCA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCACACAACATCCATTCTaGAGCCATAGATCAAAGAAT +
Preference number: 4 (lower is better)
Translates to: NTILSQSLTQSKALSLQFTQHPF*SHRSKN
Trigger: ATTCTTTGATCTATGGCTGCAGAATGGATGTTGTGT...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACATGTAATCCTATTGAGTaGACCCTGAATACACACTTC +
Preference number: 4 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTCNPIE*TLNTHF
Trigger: GAAGTGTGTATTCAGGGTGCACTCAATAGGATTACA...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGGAAGTAGGAAGGGACTaGCAGCCAGATGTAATCCTA +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILEVGRD*QPDVIL
Trigger: TAGGATTACATCTGGCTGGCAGTCCCTTCCTACTTC...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAAGAAGATCTAGCAAGTaGATTTTGGAGCAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLRRSSK*ILEQVL
Trigger: CAAGACTTGCTCCAAAATGCACTTGCTAGATCTTCT...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTGTCCAGAGTTATCAATaGGTCCAGGATACACATTTT +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTVQSYQ*VQDTHF
Trigger: AAAATGTGTATCCTGGACCCATTGATAACTCTGGAC...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGCACCTTTCGTGCTATTaGCTCTTGACCTTCCATCAA +
Preference number: 4 (lower is better)
Translates to: CPDMWSNIILGISMRVFLHLSCY*LLTFHQ
Trigger: TTGATGGAAGGTCAAGAGCCAATAGCACGAAAGGTG...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTACTGAATGGTGCTGTCTaGTTTATTCAGTGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLLNGAV*FIQWFK
Trigger: TTTGAACCACTGAATAAACCAGACAGCACCATTCAG...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp ATTCCGACTTCTGACTCAGATTACACATGGTCCAATCTAGCTAACATTTGTGGAAGTAGAAGGACCCCTTaGCCATGTTCCATCTTCATT +
Preference number: 4 (lower is better)
Translates to: IPTSDSDYTWSNLANICGSRRTP*PCSIFI
Trigger: AATGAAGATGGAACATGGCCAAGGGGTCCTTCTACT...TCCACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
CDS-3UTR CCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGAAATACTCAGTAAGTaGAGGTGTGTTGCTCAAACA +
Preference number: 4 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKEILSK*RCVAQT
Trigger: TGTTTGAGCAACACACCTCCACTTACTGAGTATTTC...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TACTCAAGGTTAACACACCTTCACACTTCAAGCCCAGTCCCAAGATGCCACTGTAATCCAATTTCTTTGTaGCTTGCTGATGTTCTTTAC +
Preference number: 4 (lower is better)
Translates to: YSRLTHLHTSSPVPRCHCNPISL*LADVLY
Trigger: GTAAAGAACATCAGCAAGCCACAAAGAAATTGGATT...ACAGTGGCATCTTGGGACTGGGCTTGAAGTGTGAAGGTGTGTTAACCTTGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549415.1
CDS-3UTR CCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGCAGATACAGAACAGATaGTTTGCTCCAGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPQIQNR*FAPEPS
Trigger: ACTGGGCTCTGGAGCAAACCATCTGTTCTGTATCTG...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGCAGATACAGAACAGATaGTTTGCTCCAGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILQIQNR*FAPEPS
Trigger: ACTGGGCTCTGGAGCAAACCATCTGTTCTGTATCTG...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCGTTGCTTCTTATGGGTaGGCAAGGAAAGTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: ISEACLYPQLLLNISAMGVASYG*ARKVVS
Trigger: AGAAACTACTTTCCTTGCCCACCCATAAGAAGCAAC...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTGCAGTGGTTGATTCATaGAGTTTAAGGAAACAAGCT +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTAVVDS*SLRKQA
Trigger: AGCTTGTTTCCTTAAACTCCATGAATCAACCACTGC...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGGGGTGCCCAGATATGTaGTCAAACATTATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPGCPDM*SNIILG
Trigger: GCCCAGAATAATGTTTGACCACATATCTGGGCACCC...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGGGGTGCCCAGATATGTaGTCAAACATTATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILGCPDM*SNIILG
Trigger: GCCCAGAATAATGTTTGACCACATATCTGGGCACCC...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGCGTGCTATTGGCTCTTaGCCTTCCATCAATGTGTAC +
Preference number: 4 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRRAIGS*PSINVY
Trigger: GTACACATTGATGGAAGGTCAAGAGCCAATAGCACG...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR TCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGTATAAACCAGCATCCTaGATGGTGCTGTCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: CPDMWSNIILGISMRVFLYKPAS*MVLSGL
Trigger: TAAACCAGACAGCACCATTCAGGATGCTGGTTTATA...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTTGTAAGAAAATCGCTTaGGATGTACTACAAGTACTG +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTCKKIA*DVLQVL
Trigger: CAGTACTTGTAGTACATCTCAAGCGATTTTCTTACA...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTACTTTAGATGGAGTATaGAATCTAGAACCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTTLDGV*NLEPVS
Trigger: GGAAACAGGTTCTAGATTTCATACTCCATCTAAAGT...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCGCTGTAAGGCTATGGTaGATTCCATCAGGAACACAC +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSAVRLW*IPSGTH
Trigger: GTGTGTTCCTGATGGAATTCACCATAGCCTTACAGC...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAAGTTCAAGGTTACAGTaGACTATGATTATGTCACTG +
Preference number: 4 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTSSRLQ*TMIMSL
Trigger: CAGTGACATAATCATAGTTCACTGTAACCTTGAACT...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATAAATTTGAAAATGCGGTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATTCTATTTCACAACCCTaGCAAGTTCCAGGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: INLKMRFSKNAAAVFMPHSISQP*QVPGSQ
Trigger: TTGGGAGCCTGGAACTTGTCAGGGTTGTGAAATAGA...ATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAACCGCATTTTCAAATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAATGTCCTTAATAGTCTaGGATCTATTTCACAACCCT +
Preference number: 4 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLMSLIV*DLFHNP
Trigger: AGGGTTGTGAAATAGATCTCAGACTATTAAGGACAT...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTTTTCTCTCTGTCCTTTaGGACTGTAGTCCAATATAT +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTFLSVL*DCSPIY
Trigger: ATATATTGGACTACAGTCTCAAAGGACAGAGAGAAA...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGGAGTATCTATCAAAATaGGGCAAGACTGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: CPDMWSNIILGISMRVFLEYLSK*GKTVHQ
Trigger: CTGATGGACAGTCTTGCCTCATTTTGATAGATACTC...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGCAACCACCATCCTGGTaGGTATCTATCAAAATGAGG +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILQPPSW*VSIKMR
Trigger: CCTCATTTTGATAGATACTCACCAGGATGGTGGTTG...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCACTACAAGTGGAGCCTaGAGATGTGTCTGGATTGCT +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSTTSGA*RCVWIA
Trigger: AGCAATCCAGACACATCTTCAGGCTCCACTTGTAGT...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGTGTTACTGTTTTGTTTaGGGGCACAGACGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPCYCFV*GHRRVC
Trigger: ACACACACGTCTGTGCCCTCAAACAAAACAGTAACA...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGTTTAAGTCAGTAGACTaGGTAAGGCAGATTGCCCTC +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILFKSVD*VRQIAL
Trigger: GAGGGCAATCTGCCTTACTCAGTCTACTGACTTAAA...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp TCTGACTCAGATTACACATGGTCCAATCTAGCTAACATTTGTGGAGTTAATATCAGGTTATTTAGGGGTTaGCTGGTCAGTCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: SDSDYTWSNLANICGVNIRLFRG*LVSLWM
Trigger: CATCCACAGACTGACCAGTCAACCCCTAAATAACCT...GATATTAACTCCACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
CDS-3UTR TCA 90 bp CATCATTTATCTCTTCTGATTCCGACTTCTGACTCAGATTACACATGGTCCAATTTTGAAAACTTCAGGTaGGGAGGCAGAATCTGCAAG +
Preference number: 4 (lower is better)
Translates to: HHLSLLIPTSDSDYTWSNFENFR*GGRICK
Trigger: CTTGCAGATTCTGCCTCCTCACCTGAAGTTTTCAAA...ATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAATCAGAAGAGATAAATGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR GCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGTTCAACCACCTTTCGTaGTATTGGCTCTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPFNHLS*YWLLTF
Trigger: GAAGGTCAAGAGCCAATAGCACGAAAGGTGGTTGAA...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTACTTCTACTTTGCAGTaGTTTACAAACATACCCTGT +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTTSTLQ*FTNIPC
Trigger: ACAGGGTATGTTTGTAAAGCACTGCAAAGTAGAAGT...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp GTGATAACGCATCATTTATCTCTTCTGATTCCGACTTCTGACTCAGATTACACACAGCATCCTGAATGGTaGTGTCTGGTTTATTCAGTG +
Preference number: 4 (lower is better)
Translates to: VITHHLSLLIPTSDSDYTQHPEW*CLVYSV
Trigger: CACTGAATAAACCAGACAGCACCATTCAGGATGCTG...TGTGTAATCTGAGTCAGAAGTCGGAATCAGAAGAGATAAATGATGCGTTATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
CDS-3UTR GCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCACAGGAATAATCACGTaGTCTGTATCTTCTGTCCTA +
Preference number: 4 (lower is better)
Translates to: ISEACLYPQLLLNISAMGTGIIT*SVSSVL
Trigger: TAGGACAGAAGATACAGAGCACGTGATTATTCCTGT...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCGCGGTTTTCGAAGAATaGTGCCGCAGTATTTATGCC +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSAVFEE*CRSIYA
Trigger: GGCATAAATACTGCGGCAGCATTCTTCGAAAACCGC...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCGCGGTTTTCGAAGAATaGTGCCGCAGTATTTATGCC +
Preference number: 4 (lower is better)
Translates to: GVDGLSEWGFGFLININSAVFEE*CRSIYA
Trigger: GGCATAAATACTGCGGCAGCATTCTTCGAAAACCGC...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTACGTGCCCAGTCTGAATaGCTACTTTTAATTAGAATA +
Preference number: 4 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLRAQSE*LLLIRI
Trigger: TATTCTAATTAAAAGTAGGCATTCAGACTGGGCACG...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGGAACAGATGATAAGTTaGTTCTTATGGGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: CPDMWSNIILGISMRVFLEQMIS*FLWVGK
Trigger: CTTGCCCACCCATAAGAAGCAACTTATCATCTGTTC...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGGGCAGTAACTGCAGATaGGGTGAAAATAGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPGSNCR*GENSKR
Trigger: TCTCTTGCTATTTTCACCGCATCTGCAGTTACTGCC...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGACTGCGGAGATCTATTaGTCAGAAAAAGATTCCTTT +
Preference number: 4 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKTAEIY*SEKDSF
Trigger: AAAGGAATCTTTTTCTGAGCAATAGATCTCCGCAGT...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTACATCAGTCTTTTCCTaGCTTTGCACTAAAACTGAA +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTTSVFS*LCTKTE
Trigger: TTCAGTTTTAGTGCAAAGGCAGGAAAAGACTGATGT...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACACTGTACCATACTCTTTaGTCTCTTGCTAAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTLYHTL*SLAKES
Trigger: ACTTTCTTTAGCAAGAGAGCAAAGAGTATGGTACAG...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp CCAGGAAGCATTGAGATAAATACTACAGGTAGAGTAGAGGGACTGTCCTTAAATTGTTCCTTAAGTGACTaGGCATCACCATCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PGSIEINTTGRVEGLSLNCSLSD*ASPSLR
Trigger: TCTCAAAGATGGTGATGCCCAGTCACTTAAGGAACA...ATTTAAGGACAGTCCCTCTACTCTACCTGTAGTATTTATCTCAATGCTTCCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR CCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTATTCCAACCTTCAGTTaGCAACAGTATGTAATCCAA +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTIPTFS*QQYVIQ
Trigger: TTGGATTACATACTGTTGCCAACTGAAGGTTGGAAT...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp GTGATAACGCATCATTTATCTCTTCTGATTCCGACTTCTGACTCAGATTACACACACCTTTCGTGCTATTaGCTCTTGACCTTCCATCAA +
Preference number: 4 (lower is better)
Translates to: VITHHLSLLIPTSDSDYTHLSCY*LLTFHQ
Trigger: TTGATGGAAGGTCAAGAGCCAATAGCACGAAAGGTG...TGTGTAATCTGAGTCAGAAGTCGGAATCAGAAGAGATAAATGATGCGTTATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR CCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAATTTGTTCCACAATCTaGTCTCCTTTTCATCTGGAA +
Preference number: 4 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLICSTI*SPFHLE
Trigger: TTCCAGATGAAAAGGAGACCAGATTGTGGAACAAAT...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGATTTGTTCCACAATCTaGTCTCCTTTTCATCTGGAA +
Preference number: 4 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKICSTI*SPFHLE
Trigger: TTCCAGATGAAAAGGAGACCAGATTGTGGAACAAAT...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCCTGAATGGTGCTGTCTaGTTTATTCAGTGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: ISEACLYPQLLLNISAMGLNGAV*FIQWFK
Trigger: TTTGAACCACTGAATAAACCAGACAGCACCATTCAG...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp ATTCCGACTTCTGACTCAGATTACACATGGTCCAATCTAGCTAACATTTGTGGAAACCAGCATCCTGAATaGTGCTGTCTGGTTTATTCA +
Preference number: 4 (lower is better)
Translates to: IPTSDSDYTWSNLANICGNQHPE*CCLVYS
Trigger: TGAATAAACCAGACAGCACCATTCAGGATGCTGGTT...TCCACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
CDS-3UTR CCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGAGTAGAAGGACCCCTTaGCCATGTTCCATCTTCATT +
Preference number: 4 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPSRRTP*PCSIFI
Trigger: AATGAAGATGGAACATGGCCAAGGGGTCCTTCTACT...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTATATTTTTGGCATCCTaGATCCTTGAATGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTIFLAS*ILECGE
Trigger: TTCACCACATTCAAGGATCCAGGATGCCAAAAATAT...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTATGAAAGTCTTATGTTaGAAGATGTCATCCAGGACT +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTMKVLC*KMSSRT
Trigger: AGTCCTGGATGACATCTTCCAACATAAGACTTTCAT...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTATTAAATGAAAATACATaGCCAGGTGCTGTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLLNENT*PGAVVH
Trigger: ATGAACCACAGCACCTGGCCATGTATTTTCATTTAA...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAACATATGCATCCTATTaGTCTTGTTTCTCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTTYASY*SCFSGE
Trigger: TTCTCCAGAGAAACAAGACCAATAGGATGCATATGT...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTATGGAACTTTTATCATTaGTTTTCCTGGTTCTCAACC +
Preference number: 4 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLWNFYH*FSWFST
Trigger: GGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCA...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTTGGAACTTTTATCATTaGTTTTCCTGGTTCTCAACC +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTWNFYH*FSWFST
Trigger: GGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCA...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGAATGTGGGACAAATGTaGGAAAGCCCCATTGTCAAG +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILNVGQM*ESPIVK
Trigger: CTTGACAATGGGGCTTTCCCACATTTGTCCCACATT...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp CATCATTTATCTCTTCTGATTCCGACTTCTGACTCAGATTACACATGGTCCAATACTCAGGATGGCTCTTaGATGGTACTTGAAATAGGC +
Preference number: 4 (lower is better)
Translates to: HHLSLLIPTSDSDYTWSNTQDGS*MVLEIG
Trigger: GCCTATTTCAAGTACCATCCAAGAGCCATCCTGAGT...ATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAATCAGAAGAGATAAATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR TCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCGGGCATCACCATCTTTaGGAAGTCCAGAGTTATCAA +
Preference number: 4 (lower is better)
Translates to: GVDGLSEWGFGFLININSGHHHL*EVQSYQ
Trigger: TTGATAACTCTGGACTTCTCAAAGATGGTGATGCCC...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGGGGCATCACCATCTTTaGGAAGTCCAGAGTTATCAA +
Preference number: 4 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRGHHHL*EVQSYQ
Trigger: TTGATAACTCTGGACTTCTCAAAGATGGTGATGCCC...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR TCA 90 bp TACACATGGTCCAATCTAGCTAACATTTGTGGAGTTAATATCAGGTTATTTAGGCGTGCTATTGGCTCTTaGCCTTCCATCAATGTGTAC +
Preference number: 4 (lower is better)
Translates to: YTWSNLANICGVNIRLFRRAIGS*PSINVY
Trigger: GTACACATTGATGGAAGGTCAAGAGCCAATAGCACG...CCTAAATAACCTGATATTAACTCCACAAATGTTAGCTAGATTGGACCATGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR TCA 90 bp AGAGCTAAGGATGGATGTGGTCGACAGGTAAAGTACAACAATTTTACAATACTGTATAAACCAGCATCCTaGATGGTGCTGTCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: RAKDGCGRQVKYNNFTILYKPAS*MVLSGL
Trigger: TAAACCAGACAGCACCATTCAGGATGCTGGTTTATA...CAGTATTGTAAAATTGTTGTACTTTACCTGTCGACCACATCCATCCTTAGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR TCA 90 bp ATAAATTTGAAAATGCGGTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATCAGGTAGTCGATATGTaGAATGTGCCCCAGCATTTA +
Preference number: 4 (lower is better)
Translates to: INLKMRFSKNAAAVFMPHQVVDM*NVPQHL
Trigger: TAAATGCTGGGGCACATTTCACATATCGACTACCTG...ATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAACCGCATTTTCAAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCCAGGTAGTCGATATGTaGAATGTGCCCCAGCATTTA +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSQVVDM*NVPQHL
Trigger: TAAATGCTGGGGCACATTTCACATATCGACTACCTG...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATAAATTTGAAAATGCGGTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATATAATTAGGTTTAGATaGGGTCATGAGGGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: INLKMRFSKNAAAVFMPHIIRFR*GHEGEG
Trigger: GCCCTCACCCTCATGACCTCATCTAAACCTAATTAT...ATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAACCGCATTTTCAAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCCTTCAAACGAGAGACTaGTTTCTTGTTAGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: GVDGLSEWGFGFLININSLQTRD*FLVRGQ
Trigger: TTGGCCCCTAACAAGAAATCAGTCTCTCGTTTGAAG...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATAAATTTGAAAATGCGGTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATCTTCAAACGAGAGACTaGTTTCTTGTTAGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: INLKMRFSKNAAAVFMPHLQTRD*FLVRGQ
Trigger: TTGGCCCCTAACAAGAAATCAGTCTCTCGTTTGAAG...ATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAACCGCATTTTCAAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGTTCTGGGCATATCTATaGGGGTGTTTTTGGATGAGA +
Preference number: 4 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPFWAYL*GCFWMR
Trigger: TCTCATCCAAAAACACCCTCATAGATATGCCCAGAA...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp TACACATGGTCCAATCTAGCTAACATTTGTGGAGTTAATATCAGGTTATTTAGGAGGTTATTTAGGGGTTaGCTGGTCAGTCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: YTWSNLANICGVNIRLFRRLFRG*LVSLWM
Trigger: CATCCACAGACTGACCAGTCAACCCCTAAATAACCT...CCTAAATAACCTGATATTAACTCCACAAATGTTAGCTAGATTGGACCATGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
CDS-3UTR TCA 90 bp TCTGACTCAGATTACACATGGTCCAATCTAGCTAACATTTGTGGAGTTAATATCTCTGATTCCGACTTCTaGCTCAGATTACACATGGTC +
Preference number: 4 (lower is better)
Translates to: SDSDYTWSNLANICGVNISDSDF*LRLHMV
Trigger: GACCATGTGTAATCTGAGTCAGAAGTCGGAATCAGA...GATATTAACTCCACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
CDS-3UTR TCA 90 bp CCAGGAAGCATTGAGATAAATACTACAGGTAGAGTAGAGGGACTGTCCTTAAATAGACTACATATGATATaGATGATGCCTCCTAGAGCT +
Preference number: 4 (lower is better)
Translates to: PGSIEINTTGRVEGLSLNRLHMI*MMPPRA
Trigger: AGCTCTAGGAGGCATCATTCATATCATATGTAGTCT...ATTTAAGGACAGTCCCTCTACTCTACCTGTAGTATTTATCTCAATGCTTCCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR GCA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGTTCAACCACCTTTCGTaGTATTGGCTCTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRFNHLS*YWLLTF
Trigger: GAAGGTCAAGAGCCAATAGCACGAAAGGTGGTTGAA...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR GCA 90 bp ATAAATTTGAAAATGCGGTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATCAGCATCCTGAATGGTaGTGTCTGGTTTATTCAGTG +
Preference number: 4 (lower is better)
Translates to: INLKMRFSKNAAAVFMPHQHPEW*CLVYSV
Trigger: CACTGAATAAACCAGACAGCACCATTCAGGATGCTG...ATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAACCGCATTTTCAAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGCAGCATCCTGAATGGTaGTGTCTGGTTTATTCAGTG +
Preference number: 4 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRQHPEW*CLVYSV
Trigger: CACTGAATAAACCAGACAGCACCATTCAGGATGCTG...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR GCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTTCCAGAGAACTGAGGTaGAAAACGTCCTACCTGTGT +
Preference number: 4 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSSRELR*KTSYLC
Trigger: ACACAGGTAGGACGTTTTGCACCTCAGTTCTCTGGA...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTTCATCTAGCCTAAGCTaGCTATCATCAAATCTTATA +
Preference number: 4 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTSSSLS*LSSNLI
Trigger: TATAAGATTTGATGATAGGCAGCTTAGGCTAGATGA...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCCTGCCGCAGTATTTATaGCACATTGATACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GVDGLSEWGFGFLININSLPQYL*HIDTAA
Trigger: AGCTGCAGTATCAATGTGGCATAAATACTGCGGCAG...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCGTTACTAAATATATCTaGTATGGGCTCAACTGTGTC +
Preference number: 4 (lower is better)
Translates to: ISEACLYPQLLLNISAMGVTKYI*YGLNCV
Trigger: GACACAGTTGAGCCCATAGCAGATATATTTAGTAAC...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCTTTCCTAACAGAATGTaGTTACTGTGTGTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: ISEACLYPQLLLNISAMGFPNRM*LLCVCH
Trigger: ATGACACACACACAGTAAGCACATTCTGTTAGGAAA...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp ATAAATTTGAAAATGCGGTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATCACCTTTCGTGCTATTaGCTCTTGACCTTCCATCAA +
Preference number: 4 (lower is better)
Translates to: INLKMRFSKNAAAVFMPHHLSCY*LLTFHQ
Trigger: TTGATGGAAGGTCAAGAGCCAATAGCACGAAAGGTG...ATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAACCGCATTTTCAAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGCACCTTTCGTGCTATTaGCTCTTGACCTTCCATCAA +
Preference number: 4 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRHLSCY*LLTFHQ
Trigger: TTGATGGAAGGTCAAGAGCCAATAGCACGAAAGGTG...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR CCA 90 bp CTGATTCCGACTTCTGACTCAGATTACACATGGTCCAATCTAGCTAACATTTGTCTGAATGGTGCTGTCTaGTTTATTCAGTGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: LIPTSDSDYTWSNLANICLNGAV*FIQWFK
Trigger: TTTGAACCACTGAATAAACCAGACAGCACCATTCAG...ACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAATCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
CDS-3UTR CCA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGAGTAGAAGGACCCCTTaGCCATGTTCCATCTTCATT +
Preference number: 4 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRSRRTP*PCSIFI
Trigger: AATGAAGATGGAACATGGCCAAGGGGTCCTTCTACT...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR CCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCAAAATTGGATGCACCTaGGGACTTAGGAGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: GVDGLSEWGFGFLININSKIGCT*GLRSRR
Trigger: CCTTCTACTCCTAAGTCCCCAGGTGCATCCAATTTT...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280377.10
CDS-3UTR CCA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGTCTGAAGAATTAGGATaGAGACCACAATATAGGTTT +
Preference number: 4 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKSEELG*RPQYRF
Trigger: AAACCTATATTGTGGTCTCCATCCTAATTCTTCAGA...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCATTCAGGGTTGCATTTaGGGAAATGGAAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GVDGLSEWGFGFLININSIQGCI*GNGKKG
Trigger: CCCCTTCTTTCCATTTCCCCAAATGCAACCCTGAAT...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGATCTCACAGTTTTTGTaGGTTAGGAATTCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: CPDMWSNIILGISMRVFLISQFL*VRNSGV
Trigger: CACACCTGAATTCCTAACCCACAAAAACTGTGAGAT...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGGCAGTGGTTGATTCATaGAGTTTAAGGAAACAAGCT +
Preference number: 4 (lower is better)
Translates to: CPDMWSNIILGISMRVFLAVVDS*SLRKQA
Trigger: AGCTTGTTTCCTTAAACTCCATGAATCAACCACTGC...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCACATATGCATCCTATTaGTCTTGTTTCTCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: ISEACLYPQLLLNISAMGTYASY*SCFSGE
Trigger: TTCTCCAGAGAAACAAGACCAATAGGATGCATATGT...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCAACATTCAGTCTTCCTaGGTCTTTAGCCAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: GVDGLSEWGFGFLININSNIQSS*VFSQVA
Trigger: AGCTACCTGGCTAAAGACCCAGGAAGACTGAATGTT...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGACTTATAGCCCAAGGTaGCAGTTGATGTCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPTYSPR*QLMSED
Trigger: ATCTTCTGACATCAACTGCCACCTTGGGCTATAAGT...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CAA 72 bp AAGATGTCATCCAGGACTTTCATAGCTAGAGAAAAGTaGATGCTTGGCTTCAAACGAGAGACTGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: KMSSRTFIAREK*MLGFKRETDFL
Trigger: CAAGAAATCAGTCTCTCGTTTGAAGCCAAGCATCAACTTTTCTCTAGCTATGAAAGTCCTGGATGACATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCCCAGGATACACATTTTaGTCTCCCATCTGGTATTTG +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSPGYTF*SPIWYL
Trigger: CAAATACCAGATGGGAGATCAAAATGTGTATCCTGG...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGTCAATGTGTACCAGCTaGCAAGTTTATTCCAACCTT +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILSMCTS*QVYSNL
Trigger: AAGGTTGGAATAAACTTGTCAGCTGGTACACATTGA...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGTATAAACCAGCATCCTaGATGGTGCTGTCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRYKPAS*MVLSGL
Trigger: TAAACCAGACAGCACCATTCAGGATGCTGGTTTATA...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR TCA 90 bp TCTGACTCAGATTACACATGGTCCAATCTAGCTAACATTTGTGGAGTTAATATCTATAAACCAGCATCCTaGATGGTGCTGTCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: SDSDYTWSNLANICGVNIYKPAS*MVLSGL
Trigger: TAAACCAGACAGCACCATTCAGGATGCTGGTTTATA...GATATTAACTCCACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
CDS-3UTR TCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGTGTAAGAAAATCGCTTaGGATGTACTACAAGTACTG +
Preference number: 4 (lower is better)
Translates to: CPDMWSNIILGISMRVFLCKKIA*DVLQVL
Trigger: CAGTACTTGTAGTACATCTCAAGCGATTTTCTTACA...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCTTACATTCGGTTATCTaGAACTCCCCATCTCAGACT +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSLHSVI*NSPSQT
Trigger: AGTCTGAGATGGGGAGTTTCAGATAACCGAATGTAA...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCGAGTATCTATCAAAATaGGGCAAGACTGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: GVDGLSEWGFGFLININSEYLSK*GKTVHQ
Trigger: CTGATGGACAGTCTTGCCTCATTTTGATAGATACTC...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGCCACTCTTTTCTACATaGAGGGATGTGATGGTTTAT +
Preference number: 4 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPPLFST*RDVMVY
Trigger: ATAAACCATCACATCCCTTCATGTAGAAAAGAGTGG...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GGCTTTAAAGAAAGCTTTATTGGAACACAGGCATTGCCATGTCTTGACATGATGTTAGCTCTCTTTCTGTaGCGTATGTGGAAATTAAAC +
Preference number: 4 (lower is better)
Translates to: GFKESFIGTQALPCLDMMLALFL*RMWKLN
Trigger: GTTTAATTTCCACATACGTCACAGAAAGAGAGCTAA...CATCATGTCAAGACATGGCAATGCCTGTGTTCCAATAAAGCTTTCTTTAAAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552997.1
CDS-3UTR TCA 90 bp GTGATAACGCATCATTTATCTCTTCTGATTCCGACTTCTGACTCAGATTACACAATCATTTATCTCTTCTaGTTCCGACTTCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: VITHHLSLLIPTSDSDYTIIYLF*FRLLTQ
Trigger: CTGAGTCAGAAGTCGGAATCAGAAGAGATAAATGAT...TGTGTAATCTGAGTCAGAAGTCGGAATCAGAAGAGATAAATGATGCGTTATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
CDS-3UTR TCA 90 bp GTGATAACGCATCATTTATCTCTTCTGATTCCGACTTCTGACTCAGATTACACAAACTTTGTTAAATCCTaGATGGGTGGCAAGCAACAT +
Preference number: 4 (lower is better)
Translates to: VITHHLSLLIPTSDSDYTNFVKS*MGGKQH
Trigger: ATGTTGCTTGCCACCCATTCAGGATTTAACAAAGTT...TGTGTAATCTGAGTCAGAAGTCGGAATCAGAAGAGATAAATGATGCGTTATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR TCA 90 bp GGATGTGGTCGACAGGTAAAGTACAACAATTTTACAATACTGTTGCAGACATTAAATGCATTTAAGGTCTaGGTAGAGCTGCTGCAAACA +
Preference number: 4 (lower is better)
Translates to: GCGRQVKYNNFTILLQTLNAFKV*VELLQT
Trigger: TGTTTGCAGCAGCTCTACTCAGACCTTAAATGCATT...TAATGTCTGCAACAGTATTGTAAAATTGTTGTACTTTACCTGTCGACCACATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR TCA 90 bp AGAGCTAAGGATGGATGTGGTCGACAGGTAAAGTACAACAATTTTACAATACTGCTCTTGGATGGTACTTaGAATAGGCAATACAGGAAA +
Preference number: 4 (lower is better)
Translates to: RAKDGCGRQVKYNNFTILLLDGT*NRQYRK
Trigger: TTTCCTGTATTGCCTATTTCAAGTACCATCCAAGAG...CAGTATTGTAAAATTGTTGTACTTTACCTGTCGACCACATCCATCCTTAGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR TCA 90 bp GGATGTGGTCGACAGGTAAAGTACAACAATTTTACAATACTGTTGCAGACATTAATCTGCAAGACTTGCTaGCTAACTAGACAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: GCGRQVKYNNFTILLQTLICKTC*LTRQEK
Trigger: CTTCTCTTGTCTAGTTAGTCAGCAAGTCTTGCAGAT...TAATGTCTGCAACAGTATTGTAAAATTGTTGTACTTTACCTGTCGACCACATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR TCA 90 bp GAAATTAAACTGTTCACTAGCAACTCTGCTCTAGTGGCTTTAAAGAAAGCTTTATGCCATGTCTTGACATaGTGTCTAAGGCTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: EIKLFTSNSALVALKKALCHVLT*CLRLLS
Trigger: TGAAAGCAGCCTTAGACATCATGTCAAGACATGGCA...TAAAGCTTTCTTTAAAGCCACTAGAGCAGAGTTGCTAGTGAACAGTTTAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552997.1
CDS-3UTR GCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCAATTTGGTCTTCAGATaGAGTGGAGACACTACTGTC +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSNLVFR*SGDTTV
Trigger: GACAGTAGTGTCTCCACTGCATCTGAAGACCAAATT...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGGAAGAGTACATATGCTaGTTTGGACACAATTTGGTC +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILEEYIC*FGHNLV
Trigger: GACCAAATTGTGTCCAAAGCAGCATATGTACTCTTC...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGAATAAAGCACCAGGCTaGAACTTTTTCAAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILNKAPG*NFFKEV
Trigger: AACCTCCTTGAAAAAGTTGCAGCCTGGTGCTTTATT...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGGTCTTTTCCTGCCTTTaGACTAAAACTGAAACATTC +
Preference number: 4 (lower is better)
Translates to: CPDMWSNIILGISMRVFLVFSCL*TKTETF
Trigger: GAATGTTTCAGTTTTAGTGCAAAGGCAGGAAAAGAC...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCTGTTCCTTAAGTGACTaGGCATCACCATCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSCSLSD*ASPSLR
Trigger: TCTCAAAGATGGTGATGCCCAGTCACTTAAGGAACA...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGTGTTCCTTAAGTGACTaGGCATCACCATCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRCSLSD*ASPSLR
Trigger: TCTCAAAGATGGTGATGCCCAGTCACTTAAGGAACA...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR CCA 90 bp AGAGCTAAGGATGGATGTGGTCGACAGGTAAAGTACAACAATTTTACAATACTGCTGAATGGTGCTGTCTaGTTTATTCAGTGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: RAKDGCGRQVKYNNFTILLNGAV*FIQWFK
Trigger: TTTGAACCACTGAATAAACCAGACAGCACCATTCAG...CAGTATTGTAAAATTGTTGTACTTTACCTGTCGACCACATCCATCCTTAGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR CCA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGAACCAGCATCCTGAATaGTGCTGTCTGGTTTATTCA +
Preference number: 4 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRNQHPE*CCLVYS
Trigger: TGAATAAACCAGACAGCACCATTCAGGATGCTGGTT...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR CCA 90 bp TATGTGGAAATTAAACTGTTCACTAGCAACTCTGCTCTAGTGGCTTTAAAGAAAAGTAGAAGGACCCCTTaGCCATGTTCCATCTTCATT +
Preference number: 4 (lower is better)
Translates to: YVEIKLFTSNSALVALKKSRRTP*PCSIFI
Trigger: AATGAAGATGGAACATGGCCAAGGGGTCCTTCTACT...TTTCTTTAAAGCCACTAGAGCAGAGTTGCTAGTGAACAGTTTAATTTCCACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552997.1
CDS-3UTR CCA 90 bp ATAAATTTGAAAATGCGGTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATTGTCTTAAAGGCTCTTaGGGTGACGTAGCTAAACTT +
Preference number: 4 (lower is better)
Translates to: INLKMRFSKNAAAVFMPHCLKGS*GDVAKL
Trigger: AAGTTTAGCTACGTCACCCCAAGAGCCTTTAAGACA...ATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAACCGCATTTTCAAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGTCATTAGTTGGTAGATaGCAGAAAGAATGTAAGCTC +
Preference number: 4 (lower is better)
Translates to: CPDMWSNIILGISMRVFLSLVGR*QKECKL
Trigger: GAGCTTACATTCTTTCTGCCATCTACCAACTAATGA...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCGGAATAATTAAACCATaGCACCGTGTGGGGTATGTT +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSGIIKP*HRVGYV
Trigger: AACATACCCCACACGGTGCCATGGTTTAATTATTCC...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGCTGATTTTCCTTGAATaGCTTAGCCAGTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: CPDMWSNIILGISMRVFLLIFLE*LSQFLN
Trigger: ATTCAGAAACTGGCTAAGCCATTCAAGGAAAATCAG...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGATCTCACAGTTTTTGTaGGTTAGGAATTCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPISQFL*VRNSGV
Trigger: CACACCTGAATTCCTAACCCACAAAAACTGTGAGAT...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGTCTACATCTGTAAAGTaGGATTCCTCAAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILSTSVK*DSSRIS
Trigger: AGAGATCCTTGAGGAATCCCACTTTACAGATGTAGA...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGTCAATGTGTACCAGCTaGCAAGTTTATTCCAACCTT +
Preference number: 4 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRSMCTS*QVYSNL
Trigger: AAGGTTGGAATAAACTTGTCAGCTGGTACACATTGA...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR TCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTTATAAACCAGCATCCTaGATGGTGCTGTCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSYKPAS*MVLSGL
Trigger: TAAACCAGACAGCACCATTCAGGATGCTGGTTTATA...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGCAAACACTGAATAGCTaGGTTCATGAAACACGTATT +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILQTLNS*VHETRI
Trigger: AATACGTGTTTCATGAACTCAGCTATTCAGTGTTTG...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATAAATTTGAAAATGCGGTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATGTGTTGCTCAAACACTaGATAGCTGAGTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: INLKMRFSKNAAAVFMPHVLLKH*IAEFMK
Trigger: TTTCATGAACTCAGCTATTCAGTGTTTGAGCAACAC...ATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAACCGCATTTTCAAATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTATACTGTACAGGTTCTaGCTCTGGAACATGCAAATG +
Preference number: 4 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSILYRF*LWNMQM
Trigger: CATTTGCATGTTCCAGAGTCAGAACCTGTACAGTAT...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATAAATTTGAAAATGCGGTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATCTTGCAGCTGAAAAATaGCATTTGAGTTTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: INLKMRFSKNAAAVFMPHLAAEK*HLSLAV
Trigger: AACTGCCAAACTCAAATGTCATTTTTCAGCTGCAAG...ATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAACCGCATTTTCAAATTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGAGTTCAAGGTTACAGTaGACTATGATTATGTCACTG +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILSSRLQ*TMIMSL
Trigger: CAGTGACATAATCATAGTTCACTGTAACCTTGAACT...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTCCTTCCCCTAGTCTATaGTTCAAGAGTTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSPSPSL*FKSFPH
Trigger: ATGTGGAAAACTCTTGAATCATAGACTAGGGGAAGG...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGATGTCCTTAATAGTCTaGGATCTATTTCACAACCCT +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILMSLIV*DLFHNP
Trigger: AGGGTTGTGAAATAGATCTCAGACTATTAAGGACAT...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCCTGGTGAAGATGCTGTaGACATTGTTGAAAAGACAA +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSLVKML*TLLKRQ
Trigger: TTGTCTTTTCAACAATGTTCACAGCATCTTCACCAG...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGTTGTATCTGTTACGGTaGTCTGTGATCAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPLYLLR*SVISNL
Trigger: AAGATTACTGATCACAGATCACCGTAACAGATACAA...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGTTGTATCTGTTACGGTaGTCTGTGATCAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILLYLLR*SVISNL
Trigger: AAGATTACTGATCACAGATCACCGTAACAGATACAA...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGCTATTGAGTGCACCCTaGATACACACTTCTATTTTT +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILLLSAP*IHTSIF
Trigger: AAAAATAGAAGTGTGTATTCAGGGTGCACTCAATAG...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCCCACTCTTTTCTACATaGAGGGATGTGATGGTTTAT +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSPLFST*RDVMVY
Trigger: ATAAACCATCACATCCCTTCATGTAGAAAAGAGTGG...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp AGAGCTAAGGATGGATGTGGTCGACAGGTAAAGTACAACAATTTTACAATACTGTTAGCTCTCTTTCTGTaGCGTATGTGGAAATTAAAC +
Preference number: 4 (lower is better)
Translates to: RAKDGCGRQVKYNNFTILLALFL*RMWKLN
Trigger: GTTTAATTTCCACATACGTCACAGAAAGAGAGCTAA...CAGTATTGTAAAATTGTTGTACTTTACCTGTCGACCACATCCATCCTTAGCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR TCA 90 bp GGATGTGGTCGACAGGTAAAGTACAACAATTTTACAATACTGTTGCAGACATTAATCATTTATCTCTTCTaGTTCCGACTTCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: GCGRQVKYNNFTILLQTLIIYLF*FRLLTQ
Trigger: CTGAGTCAGAAGTCGGAATCAGAAGAGATAAATGAT...TAATGTCTGCAACAGTATTGTAAAATTGTTGTACTTTACCTGTCGACCACATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR GCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTTGGGAGAGCTCAAGTTaGCAAATTACCACAAAATGG +
Preference number: 4 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSWESSS*QITTKW
Trigger: CCATTTTGTGGTAATTTGGCAACTTGAGCTCTCCCA...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGTTTCCTAACAGAATGTaGTTACTGTGTGTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILFPNRM*LLCVCH
Trigger: ATGACACACACACAGTAAGCACATTCTGTTAGGAAA...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCTGTAATCCTATTGAGTaGACCCTGAATACACACTTC +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSCNPIE*TLNTHF
Trigger: GAAGTGTGTATTCAGGGTGCACTCAATAGGATTACA...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGCTGTACCATACTCTTTaGTCTCTTGCTAAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILLYHTL*SLAKES
Trigger: ACTTTCTTTAGCAAGAGAGCAAAGAGTATGGTACAG...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp AGAGCTAAGGATGGATGTGGTCGACAGGTAAAGTACAACAATTTTACAATACTGATTCCAACCTTCAGTTaGCAACAGTATGTAATCCAA +
Preference number: 4 (lower is better)
Translates to: RAKDGCGRQVKYNNFTILIPTFS*QQYVIQ
Trigger: TTGGATTACATACTGTTGCCAACTGAAGGTTGGAAT...CAGTATTGTAAAATTGTTGTACTTTACCTGTCGACCACATCCATCCTTAGCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR CCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGATTCCAACCTTCAGTTaGCAACAGTATGTAATCCAA +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILIPTFS*QQYVIQ
Trigger: TTGGATTACATACTGTTGCCAACTGAAGGTTGGAAT...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGCTGAATGGTGCTGTCTaGTTTATTCAGTGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRLNGAV*FIQWFK
Trigger: TTTGAACCACTGAATAAACCAGACAGCACCATTCAG...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR CCA 90 bp TATGTGGAAATTAAACTGTTCACTAGCAACTCTGCTCTAGTGGCTTTAAAGAAAAACCAGCATCCTGAATaGTGCTGTCTGGTTTATTCA +
Preference number: 4 (lower is better)
Translates to: YVEIKLFTSNSALVALKKNQHPE*CCLVYS
Trigger: TGAATAAACCAGACAGCACCATTCAGGATGCTGGTT...TTTCTTTAAAGCCACTAGAGCAGAGTTGCTAGTGAACAGTTTAATTTCCACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552997.1
CDS-3UTR CCA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGGTTCACACATATTTTTaGCATCCTGGATCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: MEMYEISVFLPANTTSILVHTYF*HPGSLN
Trigger: ATTCAAGGATCCAGGATGCCAAAAATATGTGTGAAC...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCTCTACATCTGTAAAGTaGGATTCCTCAAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSSTSVK*DSSRIS
Trigger: AGAGATCCTTGAGGAATCCCACTTTACAGATGTAGA...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCAATATTTATGGTGGCTaGGAACCGAACCTGCAATAT +
Preference number: 4 (lower is better)
Translates to: GVDGLSEWGFGFLININSNIYGG*EPNLQY
Trigger: ATATTGCAGGTTCGGTTCCCAGCCACCATAAATATT...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGAAGGATTTGCTATTCTaGATGCCATTCATTCAGAAT +
Preference number: 4 (lower is better)
Translates to: CPDMWSNIILGISMRVFLKDLLF*MPFIQN
Trigger: ATTCTGAATGAATGGCATCCAGAATAGCAAATCCTT...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGTTAAATGAAAATACATaGCCAGGTGCTGTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPLNENT*PGAVVH
Trigger: ATGAACCACAGCACCTGGCCATGTATTTTCATTTAA...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp GTGATAACGCATCATTTATCTCTTCTGATTCCGACTTCTGACTCAGATTACACAGACTCAGATTACACATaGTCCAATCTAGCTAACATT +
Preference number: 4 (lower is better)
Translates to: VITHHLSLLIPTSDSDYTDSDYT*SNLANI
Trigger: AATGTTAGCTAGATTGGACCATGTGTAATCTGAGTC...TGTGTAATCTGAGTCAGAAGTCGGAATCAGAAGAGATAAATGATGCGTTATCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
3UTR CAA 72 bp GTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATaGATACTGCAGCTAAATATCATAGTAGTATATACG +
Preference number: 4 (lower is better)
Translates to: VFEECCRSIYAT*ILQLNIIVVYT
Trigger: CGTATATACTACTATGATATTTAGCTGCAGTATCAATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATGTGGTCGACAGGTAAAGTACAACAATTTTACAATACTGTTGCAGACATTACTTCAATGTGTACCAGCTaGCAAGTTTATTCCAACCTT +
Preference number: 4 (lower is better)
Translates to: MWSTGKVQQFYNTVADITSMCTS*QVYSNL
Trigger: AAGGTTGGAATAAACTTGTCAGCTGGTACACATTGA...AGTAATGTCTGCAACAGTATTGTAAAATTGTTGTACTTTACCTGTCGACCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR TCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTATTATCTCCTCCAACTaGATCTTCAGACTGACTGTT +
Preference number: 4 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSIISSN*IFRLTV
Trigger: AACAGTCAGTCTGAAGATTCAGTTGGAGGAGATAAT...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTCAGACTCTACAACAGTaGTTGGTACACAAACATATG +
Preference number: 4 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSQTLQQ*LVHKHM
Trigger: CATATGTTTGTGTACCAATCACTGTTGTAGAGTCTG...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp ATAAATTTGAAAATGCGGTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATAAGTTCAAAGTCATATaGTTGCTAAGTGGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: INLKMRFSKNAAAVFMPHKFKVI*LLSGKA
Trigger: AGCTTTGCCACTTAGCAATCATATGACTTTGAACTT...ATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAACCGCATTTTCAAATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCAAGTTCAAAGTCATATaGTTGCTAAGTGGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GVDGLSEWGFGFLININSKFKVI*LLSGKA
Trigger: AGCTTTGCCACTTAGCAATCATATGACTTTGAACTT...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTGAGTTTACAAAGTCCTaGAATTCAGGGTTGCATTTG +
Preference number: 4 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSEFTKS*NSGLHL
Trigger: CAAATGCAACCCTGAATTTCAGGACTTTGTAAACTC...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTCGACAGCTTCAAAAATaGAATTTAAGCCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSRQLQK*NLSLPL
Trigger: GAGAGGAAGGCTTAAATTTCATTTTTGAAGCTGTCG...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTATAATTTCTCTTGCCTaGTTGAACTGGGACATCAGT +
Preference number: 4 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSIISLA*LNWDIS
Trigger: ACTGATGTCCCAGTTCAATCAGGCAAGAGAAATTAT...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR TCA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGCCAATATTTATTGCATaGGTATGGTGTGTTGGGTAT +
Preference number: 4 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRPIFIA*VWCVGY
Trigger: ATACCCAACACACCATACTCATGCAATAAATATTGG...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR GCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTGAAGAGTACATATGCTaGTTTGGACACAATTTGGTC +
Preference number: 4 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSEEYIC*FGHNLV
Trigger: GACCAAATTGTGTCCAAAGCAGCATATGTACTCTTC...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp ATAAATTTGAAAATGCGGTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATGTAGAAGAGTACATATaGTGCTTTGGACACAATTTG +
Preference number: 4 (lower is better)
Translates to: INLKMRFSKNAAAVFMPHVEEYI*CFGHNL
Trigger: CAAATTGTGTCCAAAGCAGCATATGTACTCTTCTAC...ATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAACCGCATTTTCAAATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCACTGCGGAGATCTATTaGTCAGAAAAAGATTCCTTT +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSTAEIY*SEKDSF
Trigger: AAAGGAATCTTTTTCTGAGCAATAGATCTCCGCAGT...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp ATAAATTTGAAAATGCGGTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATACATCAGTCTTTTCCTaGCTTTGCACTAAAACTGAA +
Preference number: 4 (lower is better)
Translates to: INLKMRFSKNAAAVFMPHTSVFS*LCTKTE
Trigger: TTCAGTTTTAGTGCAAAGGCAGGAAAAGACTGATGT...ATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAACCGCATTTTCAAATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGATTCCAACCTTCAGTTaGCAACAGTATGTAATCCAA +
Preference number: 4 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRIPTFS*QQYVIQ
Trigger: TTGGATTACATACTGTTGCCAACTGAAGGTTGGAAT...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR CCA 90 bp TCTGACTCAGATTACACATGGTCCAATCTAGCTAACATTTGTGGAGTTAATATCATTTGTTCCACAATCTaGTCTCCTTTTCATCTGGAA +
Preference number: 4 (lower is better)
Translates to: SDSDYTWSNLANICGVNIICSTI*SPFHLE
Trigger: TTCCAGATGAAAAGGAGACCAGATTGTGGAACAAAT...GATATTAACTCCACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
CDS-3UTR CCA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGATTTGTTCCACAATCTaGTCTCCTTTTCATCTGGAA +
Preference number: 4 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRICSTI*SPFHLE
Trigger: TTCCAGATGAAAAGGAGACCAGATTGTGGAACAAAT...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR CCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTGAAATACTCAGTAAGTaGAGGTGTGTTGCTCAAACA +
Preference number: 4 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSEILSK*RCVAQT
Trigger: TGTTTGAGCAACACACCTCCACTTACTGAGTATTTC...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCATATTTTTGGCATCCTaGATCCTTGAATGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSIFLAS*ILECGE
Trigger: TTCACCACATTCAAGGATCCAGGATGCCAAAAATAT...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCAAAAGCCATAACCTCTaGAGTCTGGATTATTGTCTT +
Preference number: 4 (lower is better)
Translates to: GVDGLSEWGFGFLININSKSHNL*SLDYCL
Trigger: AAGACAATAATCCAGACTCCAGAGGTTATGGCTTTT...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCATGAAAGTCTTATGTTaGAAGATGTCATCCAGGACT +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSMKVLC*KMSSRT
Trigger: AGTCCTGGATGACATCTTCCAACATAAGACTTTCAT...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TCTGACTCAGATTACACATGGTCCAATCTAGCTAACATTTGTGGAGTTAATATCTGTTTACCATATGTGTaGCACTATGCTAGGCATTTA +
Preference number: 4 (lower is better)
Translates to: SDSDYTWSNLANICGVNICLPYV*HYARHL
Trigger: TAAATGCCTAGCATAGTGCCACACATATGGTAAACA...GATATTAACTCCACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR CCA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGATGAGTATGGTGTGTTaGGTATTACATAGGGAATTC +
Preference number: 4 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRMSMVC*VLHREF
Trigger: GAATTCCCTATGTAATACCCAACACACCATACTCAT...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR TCA 90 bp TACACATGGTCCAATCTAGCTAACATTTGTGGAGTTAATATCAGGTTATTTAGGTGCAGACATTACTGTTaGGTGATAACGCATCATTTA +
Preference number: 4 (lower is better)
Translates to: YTWSNLANICGVNIRLFRCRHYC*VITHHL
Trigger: TAAATGATGCGTTATCACTCAACAGTAATGTCTGCA...CCTAAATAACCTGATATTAACTCCACAAATGTTAGCTAGATTGGACCATGTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR GCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTGTTACTAAATATATCTaGTATGGGCTCAACTGTGTC +
Preference number: 4 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSVTKYI*YGLNCV
Trigger: GACACAGTTGAGCCCATAGCAGATATATTTAGTAAC...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCTGCTACATTATAGGCTaGCAAAGACATGTAGTTATT +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSCYIIG*QRHVVI
Trigger: AATAACTACATGTCTTTGGCAGCCTATAATGTAGCA...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGTTCACCAATATTTATTaGATGAGTATGGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRFTNIY*MSMVCW
Trigger: CCAACACACCATACTCATGCAATAAATATTGGTGAA...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR CCA 90 bp GAAATTAAACTGTTCACTAGCAACTCTGCTCTAGTGGCTTTAAAGAAAGCTTTAATTTGTTCCACAATCTaGTCTCCTTTTCATCTGGAA +
Preference number: 4 (lower is better)
Translates to: EIKLFTSNSALVALKKALICSTI*SPFHLE
Trigger: TTCCAGATGAAAAGGAGACCAGATTGTGGAACAAAT...TAAAGCTTTCTTTAAAGCCACTAGAGCAGAGTTGCTAGTGAACAGTTTAATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552997.1
CDS-3UTR CCA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCAATCCAATTTCTTTGTaGCTTGCTGATGTTCTTTAC +
Preference number: 4 (lower is better)
Translates to: GVDGLSEWGFGFLININSNPISL*LADVLY
Trigger: GTAAAGAACATCAGCAAGCCACAAAGAAATTGGATT...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCAATCCAATTTCTTTGTaGCTTGCTGATGTTCTTTAC +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSNPISL*LADVLY
Trigger: GTAAAGAACATCAGCAAGCCACAAAGAAATTGGATT...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTCTGATTTTCCTTGAATaGCTTAGCCAGTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSLIFLE*LSQFLN
Trigger: ATTCAGAAACTGGCTAAGCCATTCAAGGAAAATCAG...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCAATGCTATAAATGATTaGAGCTTAGTGAGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSNAIND*SLVRKA
Trigger: TGCTTTCCTCACTAAGCTCCAATCATTTATAGCATT...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp TACACATGGTCCAATCTAGCTAACATTTGTGGAGTTAATATCAGGTTATTTAGGGACTCAGATTACACATaGTCCAATCTAGCTAACATT +
Preference number: 4 (lower is better)
Translates to: YTWSNLANICGVNIRLFRDSDYT*SNLANI
Trigger: AATGTTAGCTAGATTGGACCATGTGTAATCTGAGTC...CCTAAATAACCTGATATTAACTCCACAAATGTTAGCTAGATTGGACCATGTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
3UTR CAA 72 bp AGAATATTGGCTCTACCCCATAGCAATTGTGTGAGCTaGGGAATATTACTTAAATGCTTTGTATCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: RILALPHSNCVS*GILLKCFVSWF
Trigger: AAACCAAGATACAAAGCATTTAAGTAATATTCCCAAGCTCACACAATTGCTATGGGGTAGAGCCAATATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CAA 72 bp TGGGGAAATGAGTTAAACAGGCATGATGGGATTAATTaGGATGAACTTATCAGACAATTTAAATATTGCCCA +
Preference number: 4 (lower is better)
Translates to: WGNELNRHDGIN*DELIRQFKYCP
Trigger: TGGGCAATATTTAAATTGTCTGATAAGTTCATCCAAATTAATCCCATCATGCCTGTTTAACTCATTTCCCCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CAA 72 bp CATGCCAGAGAAATCTCTTGTAAAAGGAAGAGTCAATaGATGAAGCAAACTTCACTACTGTCTTATTGTAAA +
Preference number: 4 (lower is better)
Translates to: HAREISCKRKSQ*MKQTSLLSYCK
Trigger: TTTACAATAAGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTCTCTGGCATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
3UTR CAA 72 bp CCTAACAGAATGTGCTTACTGTGTGTGTGTCATATCTaGGTACTTCTCACATTTCAAATGTCTTCATTATTA +
Preference number: 4 (lower is better)
Translates to: PNRMCLLCVCHI*VLLTFQMSSLL
Trigger: TAATAATGAAGACATTTGAAATGTGAGAAGTACCAAGATATGACACACACACAGTAAGCACATTCTGTTAGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR GCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTTCATCTAGCCTAAGCTaGCTATCATCAAATCTTATA +
Preference number: 4 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSSSSLS*LSSNLI
Trigger: TATAAGATTTGATGATAGGCAGCTTAGGCTAGATGA...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CCA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTTTATTTAAATATTTATaGTGGCTGGGAACCGAACCT +
Preference number: 4 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSLFKYL*WLGTEP
Trigger: AGGTTCGGTTCCCAGCCACCATAAATATTTAAATAA...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS CCA 90 bp CCTTTCCGGAGCGAGGTTTTGAGCAGCGTCGCGATGTCAGACCGCTaGGTGTCCAGATCCGCCGCTCCGCCTTCCGCCATCTTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: PFRSEVLSSVAMSDR*VSRSAAPPSAIFFH
Trigger: GTGGAAGAAGATGGCGGAAGGCGGAGCGGCGGATCTGGACACCCAGCGGTCTGACATCGCGACGCTGCTCAAAACCTCGCTCCGGAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280377.10
ENST00000312635.10
ENST00000353364.7
ENST00000548524.5
ENST00000549523.5
ENST00000550632.5
CDS TCA 90 bp GACTATCGACTAGGTACCAGGTGTCCCCTTTCCGGAGCGAGGTTTTaGGCAGCGTCGCGATGTCAGACCGCTGGGTGTCCAGATCCGCCG +
Preference number: 5 (lower is better)
Translates to: DYRLGTRCPLSGARF*AASRCQTAGCPDPP
Trigger: CGGCGGATCTGGACACCCAGCGGTCTGACATCGCGACGCTGCTCAAAACCTCGCTCCGGAAAGGGGACACCTGGTACCTAGTCGATAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280377.10
ENST00000312635.10
ENST00000353364.7
ENST00000537297.2
ENST00000546718.5
ENST00000548524.5
ENST00000549237.5
ENST00000549523.5
ENST00000550632.5
ENST00000551206.5
CDS-3UTR CAA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCTTCCGGAGCGAGGTTTaGAGCAGCGTCGCGATGTCA +
Preference number: 5 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFFRSEV*SSVAMS
Trigger: TGACATCGCGACGCTGCTCAAAACCTCGCTCCGGAA...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS TCA 90 bp GTGGGCCTCTCCATAGGCTGCCTGAGTGTCCTCGCCATATGCAGTTaGATTCCCCGAGTGAGAAATGAGAAAGAGAGACAGCTAGAGTGC +
Preference number: 5 (lower is better)
Translates to: VGLSIGCLSVLAICS*IPRVRNEKERQLEC
Trigger: GCACTCTAGCTGTCTCTCTTTCTCATTTCTCACTCGGGGAATTCAACTGCATATGGCGAGGACACTCAGGCAGCCTATGGAGAGGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546694.1
CDS-3UTR CAA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCCGGCTAACTGCGGCCTaGACTGCCTGGGCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: ISEACLYPQLLLNISAMGRLTAA*TAWAQA
Trigger: TGCTTGAGCCCAGGCAGTCAAGGCCGCAGTTAGCCG...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTTACAGAACAGATGGTTaGCTCCAGAGCCCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: SHNTILSQSLTQSKALSLYRTDG*LQSPVP
Trigger: TGGCACTGGGCTCTGGAGCAAACCATCTGTTCTGTA...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCGAGATGCCTCAGAGCTaGCTCTCCTCTCTGACCCTC +
Preference number: 5 (lower is better)
Translates to: NTILSQSLTQSKALSLQFEMPQS*LSSLTL
Trigger: GAGGGTCAGAGAGGAGAGCAAGCTCTGAGGCATCTC...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ACACCTTCACACTTCAAGCCCAGTCCCAAGATGCCACTGTGCCATTCCAGGAATGGCCCAACACACAATTaGGTCTTCAGATGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: TPSHFKPSPKMPLCHSRNGPTHN*VFRCSG
Trigger: TCCACTGCATCTGAAGACCAAATTGTGTGTTGGGCC...ATTCCTGGAATGGCACAGTGGCATCTTGGGACTGGGCTTGAAGTGTGAAGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549415.1
CDS TCA 90 bp CCTGAGTGTCCTCGCCATATGCAGTTGAATTCCCCGAGTGAGAAATaGGAAAGAGAGACAGCTAGAGTGCGTGTGCACCCAAGATGTAAG +
Preference number: 5 (lower is better)
Translates to: PECPRHMQLNSPSEK*ERETARVRVHPRCK
Trigger: CTTACATCTTGGGTGCACACGCACTCTAGCTGTCTCTCTTTCTCATTTCTCACTCGGGGAATTCAACTGCATATGGCGAGGACACTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546694.1
CDS-3UTR CAA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAGAGATGCCTCAGAGCTaGCTCTCCTCTCTGACCCTC +
Preference number: 5 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTEMPQS*LSSLTL
Trigger: GAGGGTCAGAGAGGAGAGCAAGCTCTGAGGCATCTC...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCCCTTTGGACTCGGACTaGAACTACACCATTGGCATT +
Preference number: 5 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFPLDSD*NYTIGI
Trigger: AATGCCAATGGTGTAGTTCAAGTCCGAGTCCAAAGG...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCTGGGCATCACCATCTTaGAGAAGTCCAGAGTTATCA +
Preference number: 5 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFWASPS*RSPELS
Trigger: TGATAACTCTGGACTTCTCAAAGATGGTGATGCCCA...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTCCACCCAGTCTGTGTTaGTTATGGCAGCCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTPPSLC*LWQPEQ
Trigger: CTGCTCAGGCTGCCATAACAAACACAGACTGGGTGG...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS CCA 90 bp AAAACTTCCCACAAGTACACCAGCAGACTTCCCTTCTGGACTCACTaGCCTTTAATGGGTTATGGGCCCAACACACAATTTGGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: KTSHKYTSRLPFWTH*PLMGYGPNTQFGLQ
Trigger: CTGAAGACCAAATTGTGTGTTGGGCCCATAACCCATTAAAGGCCAGTGAGTCCAGAAGGGAAGTCTGCTGGTGTACTTGTGGGAAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549415.1
CDS-3UTR CAA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGTTCCGGAGCGAGGTTTaGAGCAGCGTCGCGATGTCA +
Preference number: 5 (lower is better)
Translates to: CPDMWSNIILGISMRVFLFRSEV*SSVAMS
Trigger: TGACATCGCGACGCTGCTCAAAACCTCGCTCCGGAA...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTTGGGCATCACCATCTTaGAGAAGTCCAGAGTTATCA +
Preference number: 5 (lower is better)
Translates to: SHNTILSQSLTQSKALSLWASPS*RSPELS
Trigger: TGATAACTCTGGACTTCTCAAAGATGGTGATGCCCA...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ACACCTTCACACTTCAAGCCCAGTCCCAAGATGCCACTGTGCCATTCCAGGAATACTAAGGTATCCAACTaGTCTCTCATGTATCGACTG +
Preference number: 5 (lower is better)
Translates to: TPSHFKPSPKMPLCHSRNTKVSN*SLMYRL
Trigger: CAGTCGATACATGAGAGACAAGTTGGATACCTTAGT...ATTCCTGGAATGGCACAGTGGCATCTTGGGACTGGGCTTGAAGTGTGAAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549415.1
CDS CCA 90 bp TACTGCTATATGCTATTGGCCACACAGACCAACCTCAGTACAACATaGAAGAAGAGTGCCCAAGAATATGGATATGAGGAGCTGGGGATC +
Preference number: 5 (lower is better)
Translates to: YCYMLLATQTNLSTT*KKSAQEYGYEELGI
Trigger: GATCCCCAGCTCCTCATATCCATATTCTTGGGCACTCTTCTTCCATGTTGTACTGAGGTTGGTCTGTGTGGCCAATAGCATATAGCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546694.1
CDS-3UTR CAA 90 bp AGAGCTAAGGATGGATGTGGTCGACAGGTAAAGTACAACAATTTTACAATACTGTTCCGGAGCGAGGTTTaGAGCAGCGTCGCGATGTCA +
Preference number: 5 (lower is better)
Translates to: RAKDGCGRQVKYNNFTILFRSEV*SSVAMS
Trigger: TGACATCGCGACGCTGCTCAAAACCTCGCTCCGGAA...CAGTATTGTAAAATTGTTGTACTTTACCTGTCGACCACATCCATCCTTAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR CAA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCTATTCCAACCTTCAGTaGGCAACAGTATGTAATCCA +
Preference number: 5 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFYSNLQ*ATVCNP
Trigger: TGGATTACATACTGTTGCCAACTGAAGGTTGGAATA...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTACCACCTTTCGTGCTATaGGCTCTTGACCTTCCATCA +
Preference number: 5 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLPPFVL*ALDLPS
Trigger: TGATGGAAGGTCAAGAGCCAATAGCACGAAAGGTGG...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp CTGTTTTGTTTGAGGGCACAGACGTGTGTGTTCCAACTGCTCCACTGGCCATTCAGTACATATGCTGCTTaGGACACAATTTGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: LFCLRAQTCVFQLLHWPFSTYAA*DTIWSS
Trigger: TGAAGACCAAATTGTGTCCAAAGCAGCATATGTACT...GAATGGCCAGTGGAGCAGTTGGAACACACACGTCTGTGCCCTCAAACAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGAGGTCTTTCATGGTGTaGCAACCAAGGTGCCTGTTG +
Preference number: 5 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKRSFMV*QPRCLL
Trigger: CAACAGGCACCTTGGTTGCAACACCATGAAAGACCT...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp CACACCTTCACACTTCAAGCCCAGTCCCAAGATGCCACTGTGCCATTCCAGGAACAGATGAATACAGTTTaGGTTATCAGGCATAAAGAC +
Preference number: 5 (lower is better)
Translates to: HTFTLQAQSQDATVPFQEQMNTV*VIRHKD
Trigger: GTCTTTATGCCTGATAACCAAAACTGTATTCATCTG...TTCCTGGAATGGCACAGTGGCATCTTGGGACTGGGCTTGAAGTGTGAAGGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549415.1
CDS GCA 90 bp TACTCAAGGTTAACACACCTTCACACTTCAAGCCCAGTCCCAAGATaGCACTGTGCCATTCCAGGAATCACATGTAGACAGAAATCTGTT +
Preference number: 5 (lower is better)
Translates to: YSRLTHLHTSSPVPR*HCAIPGITCRQKSV
Trigger: AACAGATTTCTGTCTACATGTGATTCCTGGAATGGCACAGTGGCATCTTGGGACTGGGCTTGAAGTGTGAAGGTGTGTTAACCTTGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549415.1
CDS-3UTR CAA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGTTCCGGAGCGAGGTTTaGAGCAGCGTCGCGATGTCA +
Preference number: 5 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRFRSEV*SSVAMS
Trigger: TGACATCGCGACGCTGCTCAAAACCTCGCTCCGGAA...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR CAA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCTCGTGCTATTGGCTCTaGACCTTCCATCAATGTGTA +
Preference number: 5 (lower is better)
Translates to: NTILSQSLTQSKALSLQFSCYWL*TFHQCV
Trigger: TACACATTGATGGAAGGTCAAGAGCCAATAGCACGA...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTCAACCAAGGTGCCTGTaGAGGATGCAGTCTCATATA +
Preference number: 5 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTQPRCL*RMQSHI
Trigger: TATATGAGACTGCATCCTCAACAGGCACCTTGGTTG...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAAAAACATTACTACTaGCTGAAGGCTCTGATGGTT +
Preference number: 5 (lower is better)
Translates to: SHNTILSQSLTQSKALSLQKHYY*LKALMV
Trigger: AACCATCAGAGCCTTCAGCAAGTAGTAATGTTTTTG...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCGGTTTATTTAATGTGTaGACTGGGCCACAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: ISEACLYPQLLLNISAMGGLFNV*TGPQGA
Trigger: GGCACCCTGTGGCCCAGTCAACACATTAAATAAACC...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCATTTTGGAGCAAGTCTaGAAGGAGTGTAGGAGTTCG +
Preference number: 5 (lower is better)
Translates to: NTILSQSLTQSKALSLQFILEQV*KECRSS
Trigger: CGAACTCCTACACTCCTTCAAGACTTGCTCCAAAAT...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS CCA 90 bp TGCTTTCATACTACATCAGCAGTTATAGTTATGACAGAGACCATATaGCCCACAAAGTTAGGAGTAGAAGGACCCCTTGGCCATGTTCCA +
Preference number: 5 (lower is better)
Translates to: CFHTTSAVIVMTETI*PTKLGVEGPLGHVP
Trigger: TGGAACATGGCCAAGGGGTCCTTCTACTCCTAACTTTGTGGGCCATATGGTCTCTGTCATAACTATAACTGCTGATGTAGTATGAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552997.1
CDS-3UTR CAA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGCCACCTTTCGTGCTATaGGCTCTTGACCTTCCATCA +
Preference number: 5 (lower is better)
Translates to: CPDMWSNIILGISMRVFLPPFVL*ALDLPS
Trigger: TGATGGAAGGTCAAGAGCCAATAGCACGAAAGGTGG...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCTTTGTGTCCCGTGAGTaGACCTTTGCAAGTATCCTC +
Preference number: 5 (lower is better)
Translates to: ISEACLYPQLLLNISAMGFVSRE*TFASIL
Trigger: GAGGATACTTGCAAAGGTCAACTCACGGGACACAAA...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTATCCACTGAAAGTGTCTaGTCTCTGGTAGAAGAGTAC +
Preference number: 5 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLSTESV*SLVEEY
Trigger: GTACTCTTCTACCAGAGACAAGACACTTTCAGTGGA...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCTTGGGAGAGCTCAAGTaGCCAAATTACCACAAAATG +
Preference number: 5 (lower is better)
Translates to: NTILSQSLTQSKALSLQFLGELK*PNYHKM
Trigger: CATTTTGTGGTAATTTGGCAACTTGAGCTCTCCCAA...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTAGCAATTGTGTGAGCTaGGGAATATTACTTAAATGC +
Preference number: 5 (lower is better)
Translates to: SHNTILSQSLTQSKALSLSNCVS*GILLKC
Trigger: GCATTTAAGTAATATTCCCAAGCTCACACAATTGCT...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCTCTGAGGATAGAATATaGGCTCTACCCCATAGCAAT +
Preference number: 5 (lower is better)
Translates to: NTILSQSLTQSKALSLQFSEDRI*ALPHSN
Trigger: ATTGCTATGGGGTAGAGCCAATATTCTATCCTCAGA...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAAGGTTAATGACCTGTTaGGAGCTAGCTATGGTGGAA +
Preference number: 5 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTRLMTC*ELAMVE
Trigger: TTCCACCATAGCTAGCTCCAAACAGGTCATTAACCT...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTAGGTTAATGACCTGTTaGGAGCTAGCTATGGTGGAA +
Preference number: 5 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTRLMTC*ELAMVE
Trigger: TTCCACCATAGCTAGCTCCAAACAGGTCATTAACCT...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCCCACCCAGTCTGTGTTaGTTATGGCAGCCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSPPSLC*LWQPEQ
Trigger: CTGCTCAGGCTGCCATAACAAACACAGACTGGGTGG...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp AGCCACAACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTACAACTTTCATGACTTaGAGAAGTTCAAAACCTCAG +
Preference number: 5 (lower is better)
Translates to: SHNTILSQSLTQSKALSLTTFMT*RSSKPQ
Trigger: CTGAGGTTTTGAACTTCTCAAAGTCATGAAAGTTGT...AAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTTGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTAATGTTACTGTTTTGTTaGAGGGCACAGACGTGTGTG +
Preference number: 5 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLMLLFC*RAQTCV
Trigger: CACACACGTCTGTGCCCTCAAACAAAACAGTAACAT...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAATGTTACTGTTTTGTTaGAGGGCACAGACGTGTGTG +
Preference number: 5 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTMLLFC*RAQTCV
Trigger: CACACACGTCTGTGCCCTCAAACAAAACAGTAACAT...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTTGTGGGAAAGCCCCATaGTCAAGTAGTATGACATGT +
Preference number: 5 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTCGKAP*SSSMTC
Trigger: ACATGTCATACTACTTGACAATGGGGCTTTCCCACA...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTATTTTGGAGCAAGTCTaGAAGGAGTGTAGGAGTTCG +
Preference number: 5 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTILEQV*KECRSS
Trigger: CGAACTCCTACACTCCTTCAAGACTTGCTCCAAAAT...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS TCA 90 bp CCTTTCGTGCTATTGGCTCTTGACCTTCCATCAATGTGTACCAGCTaGCAAGTTTATTCCAACCTTCAGTTGGCAACAGTATGTAATCCA +
Preference number: 5 (lower is better)
Translates to: PFVLLALDLPSMCTS*QVYSNLQLATVCNP
Trigger: TGGATTACATACTGTTGCCAACTGAAGGTTGGAATAAACTTGTCAGCTGGTACACATTGATGGAAGGTCAAGAGCCAATAGCACGAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280377.10
ENST00000312635.10
ENST00000353364.7
ENST00000548524.5
ENST00000548836.1
ENST00000549237.5
ENST00000549523.5
ENST00000550632.5
ENST00000551206.5
CDS-3UTR CAA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCTCCAGGATACACATTTaGATCTCCCATCTGGTATTT +
Preference number: 5 (lower is better)
Translates to: NTILSQSLTQSKALSLQFSRIHI*ISHLVF
Trigger: AAATACCAGATGGGAGATCAAAATGTGTATCCTGGA...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GACTGGAACTTTTATCATTGGTTTTCCTGGTTCTCAACCCTTTGGACTCGGACTGTGTTACTCATGTATTaGTTCCACAATCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: DWNFYHWFSWFSTLWTRTVLLMY*FHNLVS
Trigger: GGAGACCAGATTGTGGAACAAATACATGAGTAACAC...AGTCCGAGTCCAAAGGGTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCTTGGGGACAACCACTTaGTACTGCATAGGTTTGGTA +
Preference number: 5 (lower is better)
Translates to: ISEACLYPQLLLNISAMGLGTTT*YCIGLV
Trigger: TACCAAACCTATGCAGTACAAAGTGGTTGTCCCCAA...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTACTGTTTCCATTTCACTaGGTGAGCCTTCTTCATGTA +
Preference number: 5 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLLFPFH*VSLLHV
Trigger: TACATGAAGAAGGCTCACCAAGTGAAATGGAAACAG...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCTCCACTGAAAGTGTCTaGTCTCTGGTAGAAGAGTAC +
Preference number: 5 (lower is better)
Translates to: ISEACLYPQLLLNISAMGSTESV*SLVEEY
Trigger: GTACTCTTCTACCAGAGACAAGACACTTTCAGTGGA...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTATCTGAGGATAGAATATaGGCTCTACCCCATAGCAAT +
Preference number: 5 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLSEDRI*ALPHSN
Trigger: ATTGCTATGGGGTAGAGCCAATATTCTATCCTCAGA...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp CCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGGGATGTGATGGTTTACACTGCGGAGATCTATaGCTCAGAAAAAGATTCCTT +
Preference number: 5 (lower is better)
Translates to: PEPMVQTTLFYMKGCDGLHCGDL*LRKRFL
Trigger: AAGGAATCTTTTTCTGAGCAATAGATCTCCGCAGTG...TAAACCATCACATCCCTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCTCCCTTCTAATCAGGTaGCTCACCCCAAGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSSLLIR*LTPSLP
Trigger: AGGAAGGCTTGGGGTGAGCAACCTGATTAGAAGGGA...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS TCA 90 bp ACTTTCGTGCTATTGGCTCTTGACCTTCCATCAATGTGTACCAGCTaGCAAGTTTATTCCAACCTTCAGTTGGCAACAGTATGTAATCCA +
Preference number: 5 (lower is better)
Translates to: TFVLLALDLPSMCTS*QVYSNLQLATVCNP
Trigger: TGGATTACATACTGTTGCCAACTGAAGGTTGGAATAAACTTGTCAGCTGGTACACATTGATGGAAGGTCAAGAGCCAATAGCACGAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537297.2
CDS-3UTR CAA 90 bp ATTCCGACTTCTGACTCAGATTACACATGGTCCAATCTAGCTAACATTTGTGGATGGGCATCACCATCTTaGAGAAGTCCAGAGTTATCA +
Preference number: 5 (lower is better)
Translates to: IPTSDSDYTWSNLANICGWASPS*RSPELS
Trigger: TGATAACTCTGGACTTCTCAAAGATGGTGATGCCCA...TCCACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR CAA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGCCACCTTTCGTGCTATaGGCTCTTGACCTTCCATCA +
Preference number: 5 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRPPFVL*ALDLPS
Trigger: TGATGGAAGGTCAAGAGCCAATAGCACGAAAGGTGG...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR CAA 90 bp ATAAATTTGAAAATGCGGTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATAGGCCTGGCTGTTCATaGTTTCTTCCAGGTTCCGAA +
Preference number: 5 (lower is better)
Translates to: INLKMRFSKNAAAVFMPHRPGCS*FLPGSE
Trigger: TTCGGAACCTGGAAGAAACAATGAACAGCCAGGCCT...ATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAACCGCATTTTCAAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGCAGTTCTTGACAGTCTaGCTGCTGATATCCAGAGAA +
Preference number: 5 (lower is better)
Translates to: CPDMWSNIILGISMRVFLQFLTV*LLISRE
Trigger: TTCTCTGGATATCAGCAGCAAGACTGTCAAGAACTG...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAAGTTTGTCTTCAGTATaGTTTCGTGGTACAGCCATA +
Preference number: 5 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTSLSSV*FRGTAI
Trigger: TATGGCTGTACCACGAAACAATACTGAAGACAAACT...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCGTTTCAGTAGATATTTaGACATATCGGCACATTCTC +
Preference number: 5 (lower is better)
Translates to: NTILSQSLTQSKALSLQFVSVDI*TYRHIL
Trigger: GAGAATGTGCCGATATGTCAAAATATCTACTGAAAC...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGTTTGTGTCCCGTGAGTaGACCTTTGCAAGTATCCTC +
Preference number: 5 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPFVSRE*TFASIL
Trigger: GAGGATACTTGCAAAGGTCAACTCACGGGACACAAA...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGAGTACATATGCTGCTTaGGACACAATTTGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKSTYAA*DTIWSS
Trigger: TGAAGACCAAATTGTGTCCAAAGCAGCATATGTACT...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp AACACTATCTTAAGCCAAAGCCTAACGCAGAGCAAGGCCCTCTCTCTTCAATTCAAATTGGCCTTTTTCTaGTCACCATACATCAGACTT +
Preference number: 5 (lower is better)
Translates to: NTILSQSLTQSKALSLQFKLAFF*SPYIRL
Trigger: AAGTCTGATGTATGGTGACAAGAAAAAGGCCAATTT...GAATTGAAGAGAGAGGGCCTTGCTCTGCGTTAGGCTTTGGCTTAAGATAGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCAGGTCTTTCATGGTGTaGCAACCAAGGTGCCTGTTG +
Preference number: 5 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSRSFMV*QPRCLL
Trigger: CAACAGGCACCTTGGTTGCAACACCATGAAAGACCT...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCCCTTCTGAAAAGGATTaGCTATTCTGGATGCCATTC +
Preference number: 5 (lower is better)
Translates to: ISEACLYPQLLLNISAMGPSEKD*LFWMPF
Trigger: GAATGGCATCCAGAATAGCAAATCCTTTTCAGAAGG...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGCCTTTGGACTCGGACTaGAACTACACCATTGGCATT +
Preference number: 5 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPPLDSD*NYTIGI
Trigger: AATGCCAATGGTGTAGTTCAAGTCCGAGTCCAAAGG...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCGGTTTATTTAATGTGTaGACTGGGCCACAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: GVDGLSEWGFGFLININSGLFNV*TGPQGA
Trigger: GGCACCCTGTGGCCCAGTCAACACATTAAATAAACC...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTTCCCTTCTAATCAGGTaGCTCACCCCAAGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSSLLIR*LTPSLP
Trigger: AGGAAGGCTTGGGGTGAGCAACCTGATTAGAAGGGA...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCAGCCCAAGGTGGCAGTaGATGTCAGAAGATCTAGCA +
Preference number: 5 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSSPRWQ*MSEDLA
Trigger: TGCTAGATCTTCTGACATCAACTGCCACCTTGGGCT...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATTCCGACTTCTGACTCAGATTACACATGGTCCAATCTAGCTAACATTTGTGGAATTGGAACACAGGCATaGCCATGTCTTGACATGATG +
Preference number: 5 (lower is better)
Translates to: IPTSDSDYTWSNLANICGIGTQA*PCLDMM
Trigger: CATCATGTCAAGACATGGCAATGCCTGTGTTCCAAT...TCCACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552997.1
CDS CCA 90 bp GTACAACATGGAAGAAGAGTGCCCAAGAATATGGATATGAGGAGCTaGGGATCACCAGGGAACATAGTAGAGAATATTATCTTAACTTAC +
Preference number: 5 (lower is better)
Translates to: VQHGRRVPKNMDMRS*GSPGNIVENIILTY
Trigger: GTAAGTTAAGATAATATTCTCTACTATGTTCCCTGGTGATCCCCAGCTCCTCATATCCATATTCTTGGGCACTCTTCTTCCATGTTGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546694.1
CDS-3UTR CAA 90 bp ATATCTGAGGCATGCCTGTACCCACAGTTGTTACTAAATATATCTGCTATGGGCTCCAGGATACACATTTaGATCTCCCATCTGGTATTT +
Preference number: 5 (lower is better)
Translates to: ISEACLYPQLLLNISAMGSRIHI*ISHLVF
Trigger: AAATACCAGATGGGAGATCAAAATGTGTATCCTGGA...GCCCATAGCAGATATATTTAGTAACAACTGTGGGTACAGGCATGCCTCAGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATGTGGTCGACAGGTAAAGTACAACAATTTTACAATACTGTTGCAGACATTACTCCACCTTTCGTGCTATaGGCTCTTGACCTTCCATCA +
Preference number: 5 (lower is better)
Translates to: MWSTGKVQQFYNTVADITPPFVL*ALDLPS
Trigger: TGATGGAAGGTCAAGAGCCAATAGCACGAAAGGTGG...AGTAATGTCTGCAACAGTATTGTAAAATTGTTGTACTTTACCTGTCGACCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR CAA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTAGGCCTGGCTGTTCATaGTTTCTTCCAGGTTCCGAA +
Preference number: 5 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSRPGCS*FLPGSE
Trigger: TTCGGAACCTGGAAGAAACAATGAACAGCCAGGCCT...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGCTCATTCCTAAGGGATaGTCAAAATTCAGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKLIPKG*SKFSSS
Trigger: AGAAGAACTGAATTTTGACAATCCCTTAGGAATGAG...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp AGAGGTGGTTTAACTCCTGAGCCTATGGTCCAAACCACTCTTTTCTACATGAAGAATATGTTTCCAATTTaGGGGACAACCACTTTGTAC +
Preference number: 5 (lower is better)
Translates to: RGGLTPEPMVQTTLFYMKNMFPI*GTTTLY
Trigger: GTACAAAGTGGTTGTCCCCAAAATTGGAAACATATT...CTTCATGTAGAAAAGAGTGGTTTGGACCATAGGCTCAGGAGTTAAACCACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAGTTTCAGTAGATATTTaGACATATCGGCACATTCTC +
Preference number: 5 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTVSVDI*TYRHIL
Trigger: GAGAATGTGCCGATATGTCAAAATATCTACTGAAAC...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGTTGGGAGAGCTCAAGTaGCCAAATTACCACAAAATG +
Preference number: 5 (lower is better)
Translates to: CPDMWSNIILGISMRVFLLGELK*PNYHKM
Trigger: CATTTTGTGGTAATTTGGCAACTTGAGCTCTCCCAA...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGAATTCAGGGTTGCATTaGGGGAAATGGAAAGAAGGG +
Preference number: 5 (lower is better)
Translates to: MEMYEISVFLPANTTSILNSGLH*GKWKEG
Trigger: CCCTTCTTTCCATTTCCCCAAATGCAACCCTGAATT...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACACACATACATATTGAATaGAAATGGCCTCCAAACCTA +
Preference number: 5 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTHIHIE*KWPPNL
Trigger: TAGGTTTGGAGGCCATTTCAATTCAATATGTATGTG...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATAAATTTGAAAATGCGGTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATCAACCAAGGTGCCTGTaGAGGATGCAGTCTCATATA +
Preference number: 5 (lower is better)
Translates to: INLKMRFSKNAAAVFMPHQPRCL*RMQSHI
Trigger: TATATGAGACTGCATCCTCAACAGGCACCTTGGTTG...ATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAACCGCATTTTCAAATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GGCCAGTTAATAACCATCCAATGGCCTCTAAATGTTCAGGTGAAGAGCTGTACAAAGGAAAGTAGTTTCTaGACAATCTCAACATCTGTG +
Preference number: 5 (lower is better)
Translates to: GQLITIQWPLNVQVKSCTKESSF*TISTSV
Trigger: CACAGATGTTGAGATTGTCAAGAAACTACTTTCCTT...TGTACAGCTCTTCACCTGAACATTTAGAGGCCATTGGATGGTTATTAACTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGAAATATTACTGCTCATaGACAAGTGCACCTGGTCAC +
Preference number: 5 (lower is better)
Translates to: CPDMWSNIILGISMRVFLKYYCS*TSAPGH
Trigger: GTGACCAGGTGCACTTGTCAATGAGCAGTAATATTT...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGTGTGGGAAAGCCCCATaGTCAAGTAGTATGACATGT +
Preference number: 5 (lower is better)
Translates to: MEMYEISVFLPANTTSILCGKAP*SSSMTC
Trigger: ACATGTCATACTACTTGACAATGGGGCTTTCCCACA...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTAGCCCAAGGTGGCAGTaGATGTCAGAAGATCTAGCA +
Preference number: 5 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSSPRWQ*MSEDLA
Trigger: TGCTAGATCTTCTGACATCAACTGCCACCTTGGGCT...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS TCA 90 bp TTCTGTTCTATCACTAATACCTGTCCTTGGTATAAACCAGCATCCTaGATGGTGCTGTCTGGTTTATTCAGTGGTTCAAATGTGTTACTC +
Preference number: 5 (lower is better)
Translates to: FCSITNTCPWYKPAS*MVLSGLFSGSNVLL
Trigger: GAGTAACACATTTGAACCACTGAATAAACCAGACAGCACCATTCAGGATGCTGGTTTATACCAAGGACAGGTATTAGTGATAGAACAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280377.10
ENST00000312635.10
ENST00000353364.7
ENST00000546694.1
ENST00000549237.5
ENST00000552997.1
CDS GCA 90 bp TTTTCACATAGCTTCAATTCTGTGAGATATACTTCTACTTTGCAGTaGTTTACAAACATACCCTGTTCAACCACATGGTTGTTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: FSHSFNSVRYTSTLQ*FTNIPCSTTWLLQA
Trigger: GGCCTGCAACAACCATGTGGTTGAACAGGGTATGTTTGTAAAGCACTGCAAAGTAGAAGTATATCTCACAGAATTGAAGCTATGTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546694.1
CDS-3UTR CAA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTTCTCCCATCTGGTATTaGTCCCAACTGTCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSSPIWY*SQLSKP
Trigger: TGGCTTTGACAGTTGGGACAAATACCAGATGGGAGA...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATTCCGACTTCTGACTCAGATTACACATGGTCCAATCTAGCTAACATTTGTGGATCCAGGATACACATTTaGATCTCCCATCTGGTATTT +
Preference number: 5 (lower is better)
Translates to: IPTSDSDYTWSNLANICGSRIHI*ISHLVF
Trigger: AAATACCAGATGGGAGATCAAAATGTGTATCCTGGA...TCCACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR CAA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGTGGGCATCACCATCTTaGAGAAGTCCAGAGTTATCA +
Preference number: 5 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRWASPS*RSPELS
Trigger: TGATAACTCTGGACTTCTCAAAGATGGTGATGCCCA...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR CAA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCTCGTGCTATTGGCTCTaGACCTTCCATCAATGTGTA +
Preference number: 5 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSSCYWL*TFHQCV
Trigger: TACACATTGATGGAAGGTCAAGAGCCAATAGCACGA...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGTCGTGCTATTGGCTCTaGACCTTCCATCAATGTGTA +
Preference number: 5 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRSCYWL*TFHQCV
Trigger: TACACATTGATGGAAGGTCAAGAGCCAATAGCACGA...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR CAA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGGTGTTACTCATGTATTaGTTCCACAATCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: MEMYEISVFLPANTTSILVLLMY*FHNLVS
Trigger: GGAGACCAGATTGTGGAACAAATACATGAGTAACAC...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp CATCATTTATCTCTTCTGATTCCGACTTCTGACTCAGATTACACATGGTCCAATGTGTTACTCATGTATTaGTTCCACAATCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: HHLSLLIPTSDSDYTWSNVLLMY*FHNLVS
Trigger: GGAGACCAGATTGTGGAACAAATACATGAGTAACAC...ATTGGACCATGTGTAATCTGAGTCAGAAGTCGGAATCAGAAGAGATAAATGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
CDS-3UTR CAA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCCAGTTCTTGACAGTCTaGCTGCTGATATCCAGAGAA +
Preference number: 5 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSQFLTV*LLISRE
Trigger: TTCTCTGGATATCAGCAGCAAGACTGTCAAGAACTG...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCTTGGGGACAACCACTTaGTACTGCATAGGTTTGGTA +
Preference number: 5 (lower is better)
Translates to: GVDGLSEWGFGFLININSLGTTT*YCIGLV
Trigger: TACCAAACCTATGCAGTACAAAGTGGTTGTCCCCAA...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGTGTTCACACATATTTTaGGCATCCTGGATCCTTGAA +
Preference number: 5 (lower is better)
Translates to: CPDMWSNIILGISMRVFLCSHIF*ASWILE
Trigger: TTCAAGGATCCAGGATGCCAAAAATATGTGTGAACA...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGAAATATTACTGCTCATaGACAAGTGCACCTGGTCAC +
Preference number: 5 (lower is better)
Translates to: MEMYEISVFLPANTTSILKYYCS*TSAPGH
Trigger: GTGACCAGGTGCACTTGTCAATGAGCAGTAATATTT...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGCTGGAACTTTTATCATaGGTTTTCCTGGTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: CPDMWSNIILGISMRVFLLELLS*VFLVLN
Trigger: GTTGAGAACCAGGAAAACCAATGATAAAAGTTCCAG...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GGATGTGGTCGACAGGTAAAGTACAACAATTTTACAATACTGTTGCAGACATTAGTAAAGGGGTACTGTTaGAAAACTTCAGGTGAGGAG +
Preference number: 5 (lower is better)
Translates to: GCGRQVKYNNFTILLQTLVKGYC*KTSGEE
Trigger: CTCCTCACCTGAAGTTTTCAAACAGTACCCCTTTAC...TAATGTCTGCAACAGTATTGTAAAATTGTTGTACTTTACCTGTCGACCACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS TCA 90 bp ATCGTATTTTCTGCTTATATCCTTGCTTTCTTTTCGTCCATTCTTTaGGTGTTGACACTTTCGTGCTATTGGCTCTTGACCTTCCATCAA +
Preference number: 5 (lower is better)
Translates to: IVFSAYILAFFSSIL*VLTLSCYWLLTFHQ
Trigger: TTGATGGAAGGTCAAGAGCCAATAGCACGAAAGTGTCAACACTCAAAGAATGGACGAAAAGAAAGCAAGGATATAAGCAGAAAATACGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537297.2
CDS TCA 90 bp AGTAATTTGAGTTTTTCACACTGTCCTTGGTATAAACCAGCATCCTaGATGGTGCTGTCTGGTTTATTCAGTGGTTCAAATGTGTTACTC +
Preference number: 5 (lower is better)
Translates to: SNLSFSHCPWYKPAS*MVLSGLFSGSNVLL
Trigger: GAGTAACACATTTGAACCACTGAATAAACCAGACAGCACCATTCAGGATGCTGGTTTATACCAAGGACAGTGTGAAAAACTCAAATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550632.5
CDS GCA 90 bp TTTTCACATAGCTTCAATTCTGTGAGATATACTTCTACTTTGCAGTaGTTTACAAACATACCCTGTTCAACCACCTTTCGTGCTATTGGC +
Preference number: 5 (lower is better)
Translates to: FSHSFNSVRYTSTLQ*FTNIPCSTTFRAIG
Trigger: GCCAATAGCACGAAAGGTGGTTGAACAGGGTATGTTTGTAAAGCACTGCAAAGTAGAAGTATATCTCACAGAATTGAAGCTATGTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280377.10
ENST00000312635.10
ENST00000353364.7
ENST00000548524.5
ENST00000548836.1
ENST00000549237.5
ENST00000550632.5
CDS-3UTR CAA 90 bp ATGTGGTCGACAGGTAAAGTACAACAATTTTACAATACTGTTGCAGACATTACTTCGTGCTATTGGCTCTaGACCTTCCATCAATGTGTA +
Preference number: 5 (lower is better)
Translates to: MWSTGKVQQFYNTVADITSCYWL*TFHQCV
Trigger: TACACATTGATGGAAGGTCAAGAGCCAATAGCACGA...AGTAATGTCTGCAACAGTATTGTAAAATTGTTGTACTTTACCTGTCGACCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR CAA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGTCTATTGTGTCAGCTTaGCTAAATCTTCGAGTTACA +
Preference number: 5 (lower is better)
Translates to: CPDMWSNIILGISMRVFLSIVSA*LNLRVT
Trigger: TGTAACTCGAAGATTTAGCAAAGCTGACACAATAGA...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp CCAGGAAGCATTGAGATAAATACTACAGGTAGAGTAGAGGGACTGTCCTTAAATTCTATTGTGTCAGCTTaGCTAAATCTTCGAGTTACA +
Preference number: 5 (lower is better)
Translates to: PGSIEINTTGRVEGLSLNSIVSA*LNLRVT
Trigger: TGTAACTCGAAGATTTAGCAAAGCTGACACAATAGA...ATTTAAGGACAGTCCCTCTACTCTACCTGTAGTATTTATCTCAATGCTTCCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR CAA 90 bp TCTGACTCAGATTACACATGGTCCAATCTAGCTAACATTTGTGGAGTTAATATCGTGTTACTCATGTATTaGTTCCACAATCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: SDSDYTWSNLANICGVNIVLLMY*FHNLVS
Trigger: GGAGACCAGATTGTGGAACAAATACATGAGTAACAC...GATATTAACTCCACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312635.10
ENST00000552997.1
CDS-3UTR CAA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGGTGTTACTCATGTATTaGTTCCACAATCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRVLLMY*FHNLVS
Trigger: GGAGACCAGATTGTGGAACAAATACATGAGTAACAC...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR CAA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGTTGTACTGCATAGGTTaGGTAAGTGGATCCATTCTA +
Preference number: 5 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPLYCIG*VSGSIL
Trigger: TAGAATGGATCCACTTACCAAACCTATGCAGTACAA...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCCTGTTTCCATTTCACTaGGTGAGCCTTCTTCATGTA +
Preference number: 5 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSLFPFH*VSLLHV
Trigger: TACATGAAGAAGGCTCACCAAGTGAAATGGAAACAG...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATAAATTTGAAAATGCGGTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATACTAAGGTATCCAACTaGTCTCTCATGTATCGACTG +
Preference number: 5 (lower is better)
Translates to: INLKMRFSKNAAAVFMPHTKVSN*SLMYRL
Trigger: CAGTCGATACATGAGAGACAAGTTGGATACCTTAGT...ATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAACCGCATTTTCAAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATAAATTTGAAAATGCGGTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATCACTGCGGAGATCTATaGCTCAGAAAAAGATTCCTT +
Preference number: 5 (lower is better)
Translates to: INLKMRFSKNAAAVFMPHHCGDL*LRKRFL
Trigger: AAGGAATCTTTTTCTGAGCAATAGATCTCCGCAGTG...ATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAACCGCATTTTCAAATTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp TGCCCAGATATGTGGTCAAACATTATTCTGGGCATATCTATGAGGGTGTTTTTGAAAACCAGGCATACCTaGTTTTATTCTGCTTCACTT +
Preference number: 5 (lower is better)
Translates to: CPDMWSNIILGISMRVFLKTRHT*FYSASL
Trigger: AAGTGAAGCAGAATAAAACAAGGTATGCCTGGTTTT...CAAAAACACCCTCATAGATATGCCCAGAATAATGTTTGACCACATATCTGGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp AAAAGAATATACTCAAGGTTAACACACCTTCACACTTCAAGCCCAGTCCCAAGAATTACAATGCAAAGCTaGTGGGCTTTAGGGATAAAA +
Preference number: 5 (lower is better)
Translates to: KRIYSRLTHLHTSSPVPRITMQS*WALGIK
Trigger: TTTTATCCCTAAAGCCCACAAGCTTTGCATTGTAAT...TCTTGGGACTGGGCTTGAAGTGTGAAGGTGTGTTAACCTTGAGTATATTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549415.1
CDS-3UTR CAA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGTCCAGGATACACATTTaGATCTCCCATCTGGTATTT +
Preference number: 5 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRSRIHI*ISHLVF
Trigger: AAATACCAGATGGGAGATCAAAATGTGTATCCTGGA...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR CAA 90 bp TCTGACTCAGATTACACATGGTCCAATCTAGCTAACATTTGTGGAGTTAATATCTATTCCAACCTTCAGTaGGCAACAGTATGTAATCCA +
Preference number: 5 (lower is better)
Translates to: SDSDYTWSNLANICGVNIYSNLQ*ATVCNP
Trigger: TGGATTACATACTGTTGCCAACTGAAGGTTGGAATA...GATATTAACTCCACAAATGTTAGCTAGATTGGACCATGTGTAATCTGAGTCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS-3UTR CAA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCTATTCCAACCTTCAGTaGGCAACAGTATGTAATCCA +
Preference number: 5 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSYSNLQ*ATVCNP
Trigger: TGGATTACATACTGTTGCCAACTGAAGGTTGGAATA...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGTATTCCAACCTTCAGTaGGCAACAGTATGTAATCCA +
Preference number: 5 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRYSNLQ*ATVCNP
Trigger: TGGATTACATACTGTTGCCAACTGAAGGTTGGAATA...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR CAA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCTTGTACTGCATAGGTTaGGTAAGTGGATCCATTCTA +
Preference number: 5 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSLYCIG*VSGSIL
Trigger: TAGAATGGATCCACTTACCAAACCTATGCAGTACAA...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGAATATGTTTCCAATTTaGGGGACAACCACTTTGTAC +
Preference number: 5 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPNMFPI*GTTTLY
Trigger: GTACAAAGTGGTTGTCCCCAAAATTGGAAACATATT...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCAGTTTGTCTTCAGTATaGTTTCGTGGTACAGCCATA +
Preference number: 5 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSSLSSV*FRGTAI
Trigger: TATGGCTGTACCACGAAACAATACTGAAGACAAACT...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGTTTAATAGGCCCACATaGATTACGGGGATAAATTTG +
Preference number: 5 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPFNRPT*ITGINL
Trigger: CAAATTTATCCCCGTAATCAATGTGGGCCTATTAAA...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCTGTTCACACATATTTTaGGCATCCTGGATCCTTGAA +
Preference number: 5 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSCSHIF*ASWILE
Trigger: TTCAAGGATCCAGGATGCCAAAAATATGTGTGAACA...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATGGAGATGTATGAGATTAGTGTTTTTCTGCCTGCTAACACAACATCCATTCTGAGCAATTGTGTGAGCTaGGGAATATTACTTAAATGC +
Preference number: 5 (lower is better)
Translates to: MEMYEISVFLPANTTSILSNCVS*GILLKC
Trigger: GCATTTAAGTAATATTCCCAAGCTCACACAATTGCT...CAGAATGGATGTTGTGTTAGCAGGCAGAAAAACACTAATCTCATACATCTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGCCCACCACCTTTATGTaGTATCTATTTTGGTACTTA +
Preference number: 5 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPPTTFM*YLFWYL
Trigger: TAAGTACCAAAATAGATACAACATAAAGGTGGTGGG...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATAATGTTTTTGCTCTATAAAAGGAACCATAAAGCCTGGATGGTAGCACATCCGTTGTGGGAAAGACTGTaGGGATGTTTCCATATTTAT +
Preference number: 5 (lower is better)
Translates to: IMFLLYKRNHKAWMVAHPLWERL*GCFHIY
Trigger: ATAAATATGGAAACATCCCAACAGTCTTTCCCACAA...CGGATGTGCTACCATCCAGGCTTTATGGTTCCTTTTATAGAGCAAAAACATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTCCTTCTGAAAAGGATTaGCTATTCTGGATGCCATTC +
Preference number: 5 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSPSEKD*LFWMPF
Trigger: GAATGGCATCCAGAATAGCAAATCCTTTTCAGAAGG...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GTGATAACGCATCATTTATCTCTTCTGATTCCGACTTCTGACTCAGATTACACATTGCAGACATTACTGTaGAGTGATAACGCATCATTT +
Preference number: 5 (lower is better)
Translates to: VITHHLSLLIPTSDSDYTLQTLL*SDNASF
Trigger: AAATGATGCGTTATCACTCAACAGTAATGTCTGCAA...TGTGTAATCTGAGTCAGAAGTCGGAATCAGAAGAGATAAATGATGCGTTATCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312635.10
CDS TCA 90 bp ATTTCACCTCTCATTCCTAAGGGATTGTCAAAATTCAGTTCTTCTTaGTACTTATCATTGAGGAAATACTCAGTAAGTGGAGGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: ISPLIPKGLSKFSSS*YLSLRKYSVSGGVL
Trigger: CAACACACCTCCACTTACTGAGTATTTCCTCAATGATAAGTATCAAGAAGAACTGAATTTTGACAATCCCTTAGGAATGAGAGGTGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280377.10
ENST00000353364.7
ENST00000547317.5
ENST00000549268.1
CDS GCA 90 bp TTTTCACATAGCTTCAATTCTGTGAGATATACTTCTACTTTGCAGTaGTTTACAAACATACCCTGTTCAACCACCTTCATTCCAAGTATG +
Preference number: 5 (lower is better)
Translates to: FSHSFNSVRYTSTLQ*FTNIPCSTTFIPSM
Trigger: CATACTTGGAATGAAGGTGGTTGAACAGGGTATGTTTGTAAAGCACTGCAAAGTAGAAGTATATCTCACAGAATTGAAGCTATGTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549523.5
CDS CCA 90 bp AAGCATAATAAGCCCACTATTCTAAAATCTACTAACTCAATTACCTaGGTTTCTTATGGGTCTGTTTCTATTGTCTGCTGTTTCTCTTGG +
Preference number: 5 (lower is better)
Translates to: KHNKPTILKSTNSIT*VSYGSVSIVCCFSW
Trigger: CCAAGAGAAACAGCAGACAATAGAAACAGACCCATAAGAAACCCAGGTAATTGAGTTAGTAGATTTTAGAATAGTGGGCTTATTATGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537297.2
CDS-3UTR CAA 90 bp CCTGTATTCACCAATATTTATTGCATGAGTATGGTGTGTTGGGTATTACATAGGTCTATTGTGTCAGCTTaGCTAAATCTTCGAGTTACA +
Preference number: 5 (lower is better)
Translates to: PVFTNIYCMSMVCWVLHRSIVSA*LNLRVT
Trigger: TGTAACTCGAAGATTTAGCAAAGCTGACACAATAGA...CCTATGTAATACCCAACACACCATACTCATGCAATAAATATTGGTGAATACAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549237.5
CDS-3UTR CAA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCCTCATTCCTAAGGGATaGTCAAAATTCAGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: GVDGLSEWGFGFLININSLIPKG*SKFSSS
Trigger: AGAAGAACTGAATTTTGACAATCCCTTAGGAATGAG...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GGAGTGGATGGCTTAAGTGAATGGGGATTTGGTTTCCTTATAAATATTAATAGCTCAGTATTGCCTAAGTaGTTGAACTGGAATGTAAAC +
Preference number: 5 (lower is better)
Translates to: GVDGLSEWGFGFLININSSVLPK*LNWNVN
Trigger: GTTTACATTCCAGTTCAACAACTTAGGCAATACTGA...GCTATTAATATTTATAAGGAAACCAAATCCCCATTCACTTAAGCCATCCACTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCTCAGTATTGCCTAAGTaGTTGAACTGGAATGTAAAC +
Preference number: 5 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSSVLPK*LNWNVN
Trigger: GTTTACATTCCAGTTCAACAACTTAGGCAATACTGA...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCAAATTGGCCTTTTTCTaGTCACCATACATCAGACTT +
Preference number: 5 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSKLAFF*SPYIRL
Trigger: AAGTCTGATGTATGGTGACAAGAAAAAGGCCAATTT...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp ATAAATTTGAAAATGCGGTTTTCGAAGAATGCTGCCGCAGTATTTATGCCACATTTGTGGGAAAGACTGTaGGGATGTTTCCATATTTAT +
Preference number: 5 (lower is better)
Translates to: INLKMRFSKNAAAVFMPHLWERL*GCFHIY
Trigger: ATAAATATGGAAACATCCCAACAGTCTTTCCCACAA...ATGTGGCATAAATACTGCGGCAGCATTCTTCGAAAACCGCATTTTCAAATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTGTTATCTCACAGTTTTaGTGGGTTAGGAATTCAGGT +
Preference number: 5 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSVISQF*WVRNSG
Trigger: ACCTGAATTCCTAACCCACAAAAACTGTGAGATAAC...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCAAGGAAAGTAGTTTCTaGACAATCTCAACATCTGTG +
Preference number: 5 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSKESSF*TISTSV
Trigger: CACAGATGTTGAGATTGTCAAGAAACTACTTTCCTT...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp TTCTCTTATAACAAGTTACCTTCTGAGAAAAGCTGTAAGGCTATGGTGAATTCCAAAACCAGGCATACCTaGTTTTATTCTGCTTCACTT +
Preference number: 5 (lower is better)
Translates to: FSYNKLPSEKSCKAMVNSKTRHT*FYSASL
Trigger: AAGTGAAGCAGAATAAAACAAGGTATGCCTGGTTTT...GGAATTCACCATAGCCTTACAGCTTTTCTCAGAAGGTAACTTGTTATAAGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTTCTATTGTGTCAGCTTaGCTAAATCTTCGAGTTACA +
Preference number: 5 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSSIVSA*LNLRVT
Trigger: TGTAACTCGAAGATTTAGCAAAGCTGACACAATAGA...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTCACATACATATTGAATaGAAATGGCCTCCAAACCTA +
Preference number: 5 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSHIHIE*KWPPNL
Trigger: TAGGTTTGGAGGCCATTTCAATTCAATATGTATGTG...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS-3UTR CAA 90 bp GAAATCTCTTGTAAAAGGAAGAGTCAATTGATGAAGCAAACTTCACTACTGTCTACAACTTTCATGACTTaGAGAAGTTCAAAACCTCAG +
Preference number: 5 (lower is better)
Translates to: EISCKRKSQLMKQTSLLSTTFMT*RSSKPQ
Trigger: CTGAGGTTTTGAACTTCTCAAAGTCATGAAAGTTGT...AGACAGTAGTGAAGTTTGCTTCATCAATTGACTCTTCCTTTTACAAGAGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280377.10
ENST00000353364.7
CDS CCA 72 bp AGCGAGGTTTTGAGCAGCGTCGCGATGTCAGACCGCTaGGTGTCCAGATCCGCCGCTCCGCCTTCCGCCATC +
Preference number: 6 (lower is better)
Translates to: SEVLSSVAMSDR*VSRSAAPPSAI
Trigger: GATGGCGGAAGGCGGAGCGGCGGATCTGGACACCCAGCGGTCTGACATCGCGACGCTGCTCAAAACCTCGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280377.10
ENST00000312635.10
ENST00000353364.7
ENST00000537297.2
ENST00000546718.5
ENST00000548524.5
ENST00000549523.5
ENST00000550632.5
ENST00000551206.5
CDS CAA 90 bp CGACTATCGACTAGGTACCAGGTGTCCCCTTTCCGGAGCGAGGTTTaGAGCAGCGTCGCGATGTCAGACCGCTGGGTGTCCAGATCCGCC +
Preference number: 6 (lower is better)
Translates to: RLSTRYQVSPFRSEV*SSVAMSDRWVSRSA
Trigger: GGCGGATCTGGACACCCAGCGGTCTGACATCGCGACGCTGCTCAAAACCTCGCTCCGGAAAGGGGACACCTGGTACCTAGTCGATAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280377.10
ENST00000312635.10
ENST00000353364.7
ENST00000537297.2
ENST00000546718.5
ENST00000548524.5
ENST00000549237.5
ENST00000549523.5
ENST00000550632.5
ENST00000551206.5
CDS TCA 72 bp CTAGGTACCAGGTGTCCCCTTTCCGGAGCGAGGTTTTaGGCAGCGTCGCGATGTCAGACCGCTGGGTGTCCA +
Preference number: 6 (lower is better)
Translates to: LGTRCPLSGARF*AASRCQTAGCP
Trigger: TGGACACCCAGCGGTCTGACATCGCGACGCTGCTCAAAACCTCGCTCCGGAAAGGGGACACCTGGTACCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280377.10
ENST00000312635.10
ENST00000353364.7
ENST00000537297.2
ENST00000546718.5
ENST00000548524.5
ENST00000549237.5
ENST00000549523.5
ENST00000550632.5
ENST00000551206.5
CDS CAA 72 bp ACTAGGTACCAGGTGTCCCCTTTCCGGAGCGAGGTTTaGAGCAGCGTCGCGATGTCAGACCGCTGGGTGTCC +
Preference number: 6 (lower is better)
Translates to: TRYQVSPFRSEV*SSVAMSDRWVS
Trigger: GGACACCCAGCGGTCTGACATCGCGACGCTGCTCAAAACCTCGCTCCGGAAAGGGGACACCTGGTACCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280377.10
ENST00000312635.10
ENST00000353364.7
ENST00000537297.2
ENST00000546718.5
ENST00000548524.5
ENST00000549237.5
ENST00000549523.5
ENST00000550632.5
ENST00000551206.5
CDS CCA 72 bp ACCACATGGTTGTTGCAGGCCTCCGTTCCTCTCTATTaGCCAGAGATCTCAGTTCCTCACCATGTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: TTWLLQASVPLY*PEISVPHHVGL
Trigger: GAGGCCCACATGGTGAGGAACTGAGATCTCTGGCCAATAGAGAGGAACGGAGGCCTGCAACAACCATGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546694.1
CDS TCA 72 bp CCTCGCCATATGCAGTTGAATTCCCCGAGTGAGAAATaGGAAAGAGAGACAGCTAGAGTGCGTGTGCACCCA +
Preference number: 6 (lower is better)
Translates to: PRHMQLNSPSEK*ERETARVRVHP
Trigger: TGGGTGCACACGCACTCTAGCTGTCTCTCTTTCTCATTTCTCACTCGGGGAATTCAACTGCATATGGCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546694.1
CDS CCA 72 bp AAAACTTCCCACAAGTACACCAGCAGACTTCCCTTCTaGACTCACTGGCCTTTAATGGGTTATGGGCCCAAC +
Preference number: 6 (lower is better)
Translates to: KTSHKYTSRLPF*THWPLMGYGPN
Trigger: GTTGGGCCCATAACCCATTAAAGGCCAGTGAGTCCAGAAGGGAAGTCTGCTGGTGTACTTGTGGGAAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549415.1
CDS CAA 72 bp CAGTGCTTTACAAACATACCCTGTTCAACCACATGGTaGTTGCAGGCCTCCGTTCCTCTCTATTGGCCAGAG +
Preference number: 6 (lower is better)
Translates to: QCFTNIPCSTTW*LQASVPLYWPE
Trigger: CTCTGGCCAATAGAGAGGAACGGAGGCCTGCAACAACCATGTGGTTGAACAGGGTATGTTTGTAAAGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546694.1
CDS CCA 72 bp ACTTCCCTTCTGGACTCACTGGCCTTTAATGGGTTATaGGCCCAACACACAATTTGGTCTTCAGATGCAGTG +
Preference number: 6 (lower is better)
Translates to: TSLLDSLAFNGL*AQHTIWSSDAV
Trigger: CACTGCATCTGAAGACCAAATTGTGTGTTGGGCCCATAACCCATTAAAGGCCAGTGAGTCCAGAAGGGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549415.1
CDS CCA 72 bp CACAAGTACACCAGCAGACTTCCCTTCTGGACTCACTaGCCTTTAATGGGTTATGGGCCCAACACACAATTT +
Preference number: 6 (lower is better)
Translates to: HKYTSRLPFWTH*PLMGYGPNTQF
Trigger: AAATTGTGTGTTGGGCCCATAACCCATTAAAGGCCAGTGAGTCCAGAAGGGAAGTCTGCTGGTGTACTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549415.1
CDS CAA 72 bp TGCTTTACAAACATACCCTGTTCAACCACATGGTTGTaGCAGGCCTCCGTTCCTCTCTATTGGCCAGAGATC +
Preference number: 6 (lower is better)
Translates to: CFTNIPCSTTWL*QASVPLYWPEI
Trigger: GATCTCTGGCCAATAGAGAGGAACGGAGGCCTGCAACAACCATGTGGTTGAACAGGGTATGTTTGTAAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546694.1
CDS GCA 72 bp TGGGTTATGGGCCCAACACACAATTTGGTCTTCAGATaGAGTGGAGACACTACTGTCATCAAAATAGTACCA +
Preference number: 6 (lower is better)
Translates to: WVMGPTHNLVFR*SGDTTVIKIVP
Trigger: TGGTACTATTTTGATGACAGTAGTGTCTCCACTGCATCTGAAGACCAAATTGTGTGTTGGGCCCATAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549415.1
CDS CCA 72 bp CATATGGCCCACAAAGTTAGGAGTAGAAGGACCCCTTaGCCATGTTCCATCTTCATTTTTCTGTTCTATCAC +
Preference number: 6 (lower is better)
Translates to: HMAHKVRSRRTP*PCSIFIFLFYH
Trigger: GTGATAGAACAGAAAAATGAAGATGGAACATGGCCAAGGGGTCCTTCTACTCCTAACTTTGTGGGCCATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552997.1
CDS TCA 72 bp AGTCCAGAGTTATCAATGGGTCCAGGATACACATTTTaGTCTCCCATCTGGTATTTGTCCCAACTGTCAAAG +
Preference number: 6 (lower is better)
Translates to: SPELSMGPGYTF*SPIWYLSQLSK
Trigger: CTTTGACAGTTGGGACAAATACCAGATGGGAGATCAAAATGTGTATCCTGGACCCATTGATAACTCTGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000280377.10
ENST00000312635.10
ENST00000353364.7
ENST00000537297.2
ENST00000546718.5
ENST00000548524.5
ENST00000548836.1
ENST00000549237.5
ENST00000549523.5
ENST00000550632.5
ENST00000551206.5
CDS TCA 72 bp CTATTGGCTCTTGACCTTCCATCAATGTGTACCAGCTaGCAAGTTTATTCCAACCTTCAGTTGGCAACAGTA +
Preference number: 6 (lower is better)
Translates to: LLALDLPSMCTS*QVYSNLQLATV
Trigger: TACTGTTGCCAACTGAAGGTTGGAATAAACTTGTCAGCTGGTACACATTGATGGAAGGTCAAGAGCCAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000280377.10
ENST00000312635.10
ENST00000353364.7
ENST00000537297.2
ENST00000548524.5
ENST00000548836.1
ENST00000549237.5
ENST00000549523.5
ENST00000550632.5
ENST00000551206.5
CDS TCA 72 bp GCTTTATTGGAACACAGGCATTGCCATGTCTTGACATaGTGTCTAAGGCTGCTTTCATACTACATCAGCAGT +
Preference number: 6 (lower is better)
Translates to: ALLEHRHCHVLT*CLRLLSYYISS
Trigger: ACTGCTGATGTAGTATGAAAGCAGCCTTAGACATCATGTCAAGACATGGCAATGCCTGTGTTCCAATAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552997.1
CDS TCA 72 bp TCTGCTTATATCCTTGCTTTCTTTTCGTCCATTCTTTaGGTGTTGACACTTTCGTGCTATTGGCTCTTGACC +
Preference number: 6 (lower is better)
Translates to: SAYILAFFSSIL*VLTLSCYWLLT
Trigger: GGTCAAGAGCCAATAGCACGAAAGTGTCAACACTCAAAGAATGGACGAAAAGAAAGCAAGGATATAAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537297.2
CDS CAA 90 bp CTCTGCTCTAGTGGCTTTAAAGAAAGCTTTATTGGAACACAGGCATaGCCATGTCTTGACATGATGTCTAAGGCTGCTTTCATACTACAT +
Preference number: 6 (lower is better)
Translates to: LCSSGFKESFIGTQA*PCLDMMSKAAFILH
Trigger: ATGTAGTATGAAAGCAGCCTTAGACATCATGTCAAGACATGGCAATGCCTGTGTTCCAATAAAGCTTTCTTTAAAGCCACTAGAGCAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552997.1
CDS CAA 72 bp TTCTGCTTATATCCTTGCTTTCTTTTCGTCCATTCTTaGAGTGTTGACACTTTCGTGCTATTGGCTCTTGAC +
Preference number: 6 (lower is better)
Translates to: FCLYPCFLFVHS*SVDTFVLLALD
Trigger: GTCAAGAGCCAATAGCACGAAAGTGTCAACACTCAAAGAATGGACGAAAAGAAAGCAAGGATATAAGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537297.2
CDS GCA 72 bp AGCTTCAATTCTGTGAGATATACTTCTACTTTGCAGTaGTTTACAAACATACCCTGTTCAACCACCTTTCGT +
Preference number: 6 (lower is better)
Translates to: SFNSVRYTSTLQ*FTNIPCSTTFR
Trigger: ACGAAAGGTGGTTGAACAGGGTATGTTTGTAAAGCACTGCAAAGTAGAAGTATATCTCACAGAATTGAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280377.10
ENST00000312635.10
ENST00000353364.7
ENST00000548524.5
ENST00000548836.1
ENST00000549237.5
ENST00000550632.5
CDS GCA 72 bp AGCTTCAATTCTGTGAGATATACTTCTACTTTGCAGTaGTTTACAAACATACCCTGTTCAACCACATGGTTG +
Preference number: 6 (lower is better)
Translates to: SFNSVRYTSTLQ*FTNIPCSTTWL
Trigger: CAACCATGTGGTTGAACAGGGTATGTTTGTAAAGCACTGCAAAGTAGAAGTATATCTCACAGAATTGAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546694.1
CDS CAA 72 bp TCACATAGCTTCAATTCTGTGAGATATACTTCTACTTaGCAGTGCTTTACAAACATACCCTGTTCAACCACC +
Preference number: 6 (lower is better)
Translates to: SHSFNSVRYTST*QCFTNIPCSTT
Trigger: GGTGGTTGAACAGGGTATGTTTGTAAAGCACTGCAAAGTAGAAGTATATCTCACAGAATTGAAGCTATGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000280377.10
ENST00000312635.10
ENST00000353364.7
ENST00000548524.5
ENST00000548836.1
ENST00000549237.5
ENST00000549523.5
ENST00000550632.5
CDS CAA 90 bp TTTCCATTTTCACATAGCTTCAATTCTGTGAGATATACTTCTACTTaGCAGTGCTTTACAAACATACCCTGTTCAACCACCTTTCGTGCT +
Preference number: 6 (lower is better)
Translates to: FPFSHSFNSVRYTST*QCFTNIPCSTTFRA
Trigger: AGCACGAAAGGTGGTTGAACAGGGTATGTTTGTAAAGCACTGCAAAGTAGAAGTATATCTCACAGAATTGAAGCTATGTGAAAATGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280377.10
ENST00000312635.10
ENST00000353364.7
ENST00000548524.5
ENST00000548836.1
ENST00000549237.5
ENST00000550632.5
CDS CAA 90 bp GTGCTGTCTGGTTTATTCAGTGGTTCAAATGTGTTACTCATGTATTaGTTCCACAATCTGGTCTCCTTTTCATCTGGAATACTGAAGATT +
Preference number: 6 (lower is better)
Translates to: VLSGLFSGSNVLLMY*FHNLVSFSSGILKI
Trigger: AATCTTCAGTATTCCAGATGAAAAGGAGACCAGATTGTGGAACAAATACATGAGTAACACATTTGAACCACTGAATAAACCAGACAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280377.10
ENST00000312635.10
ENST00000353364.7
ENST00000546694.1
ENST00000549237.5
ENST00000550632.5
ENST00000552997.1
CDS GCA 72 bp AGCTTCAATTCTGTGAGATATACTTCTACTTTGCAGTaGTTTACAAACATACCCTGTTCAACCACCTTCATT +
Preference number: 6 (lower is better)
Translates to: SFNSVRYTSTLQ*FTNIPCSTTFI
Trigger: AATGAAGGTGGTTGAACAGGGTATGTTTGTAAAGCACTGCAAAGTAGAAGTATATCTCACAGAATTGAAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549523.5
CDS CCA 72 bp AAGCCCACTATTCTAAAATCTACTAACTCAATTACCTaGGTTTCTTATGGGTCTGTTTCTATTGTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: KPTILKSTNSIT*VSYGSVSIVCC
Trigger: ACAGCAGACAATAGAAACAGACCCATAAGAAACCCAGGTAATTGAGTTAGTAGATTTTAGAATAGTGGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537297.2
CDS CAA 72 bp TCACATAGCTTCAATTCTGTGAGATATACTTCTACTTaGCAGTGCTTTACAAACATACCCTGTTCAACCACA +
Preference number: 6 (lower is better)
Translates to: SHSFNSVRYTST*QCFTNIPCSTT
Trigger: TGTGGTTGAACAGGGTATGTTTGTAAAGCACTGCAAAGTAGAAGTATATCTCACAGAATTGAAGCTATGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546694.1
CDS CAA 90 bp TTTCCATTTTCACATAGCTTCAATTCTGTGAGATATACTTCTACTTaGCAGTGCTTTACAAACATACCCTGTTCAACCACCTTCATTCCA +
Preference number: 6 (lower is better)
Translates to: FPFSHSFNSVRYTST*QCFTNIPCSTTFIP
Trigger: TGGAATGAAGGTGGTTGAACAGGGTATGTTTGTAAAGCACTGCAAAGTAGAAGTATATCTCACAGAATTGAAGCTATGTGAAAATGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549523.5
CDS CAA 90 bp TTTCCATTTTCACATAGCTTCAATTCTGTGAGATATACTTCTACTTaGCAGTGCTTTACAAACATACCCTGTTCAACCACATGGTTGTTG +
Preference number: 6 (lower is better)
Translates to: FPFSHSFNSVRYTST*QCFTNIPCSTTWLL
Trigger: CAACAACCATGTGGTTGAACAGGGTATGTTTGTAAAGCACTGCAAAGTAGAAGTATATCTCACAGAATTGAAGCTATGTGAAAATGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546694.1
CDS CAA 72 bp ACAAGACAGGATCTTGCATTACCTATTGTGTCAGCTTaGCTAAATCTTCGAGTTACAACATTATTCATGTTT +
Preference number: 6 (lower is better)
Translates to: TRQDLALPIVSA*LNLRVTTLFMF
Trigger: AAACATGAATAATGTTGTAACTCGAAGATTTAGCAAAGCTGACACAATAGGTAATGCAAGATCCTGTCTTGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548524.5