RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP13 (Homo sapiens)

Ensembl gene IDs: ENSG00000058056

Ensembl transcript IDs: ENST00000263966.8, ENST00000482333.5, ENST00000496897.5, ENST00000497155.1, ENST00000497380.1, ENST00000602704.2, ENST00000679350.1, ENST00000679403.1, ENST00000679407.1, ENST00000679694.1, ENST00000679749.1, ENST00000679752.1, ENST00000679768.1, ENST00000679769.1, ENST00000679783.1, ENST00000679839.1, ENST00000679893.1, ENST00000679954.1, ENST00000679972.1, ENST00000680008.1, ENST00000680031.1, ENST00000680055.1, ENST00000680167.1, ENST00000680217.1, ENST00000680276.1, ENST00000680307.1, ENST00000680436.1, ENST00000680477.1, ENST00000680502.1, ENST00000680549.1, ENST00000680587.1, ENST00000680605.1, ENST00000680651.1, ENST00000680734.1, ENST00000680853.1, ENST00000680856.1, ENST00000680905.1, ENST00000680951.1, ENST00000681051.1, ENST00000681064.1, ENST00000681098.1, ENST00000681109.1, ENST00000681128.1, ENST00000681262.1, ENST00000681299.1, ENST00000681356.1, ENST00000681358.1, ENST00000681362.1, ENST00000681533.1, ENST00000681560.1, ENST00000681642.1, ENST00000681649.1, ENST00000681724.1, ENST00000681736.1, ENST00000681782.1, ENST00000681836.1, ENST00000681918.1

Found 1003 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAATGTCCTGAAGCAATAAAGATGGGCTTCGCAGCGCACACTGAGTaGACTGGACCTAGATGGGGCAGGGAGGTGCCGCGTGCCCTGGTC +
Preference number: 1 (lower is better)
Translates to: KCPEAIKMGFAAHTE*TGPRWGREVPRALV
Trigger: GACCAGGGCACGCGGCACCTCCCTGCCCCATCTAGGTCCAGTCCACTCAGTGTGCGCTGCGAAGCCCATCTTTATTGCTTCAGGACATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680605.1
3UTR CCA 90 bp CAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATaGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGAT +
Preference number: 1 (lower is better)
Translates to: QGPQSARSSTQVSRP*ALDTMSLGHMAPKD
Trigger: ATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263966.8
ENST00000680587.1
ENST00000680734.1
ENST00000681736.1
ENST00000681918.1
3UTR GCA 90 bp CTAGTGGGTAGCCCATGTCTCTGTAATGCTCCAGCGCATGCCCGTTaGCCCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACAGAGC +
Preference number: 1 (lower is better)
Translates to: LVGSPCLCNAPAHAR*PQSCQRTTFHTGQS
Trigger: GCTCTGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGAGCATTACAGAGACATGGGCTACCCACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
3UTR TCA 90 bp TGCTGGACAGGTGGGCACAGGAACAGACTCAGCCTCTGCCAAGGCTaGGACAAGCGGCACATCAAGAGTGGCAGGATTTGTGCAGTGTTT +
Preference number: 1 (lower is better)
Translates to: CWTGGHRNRLSLCQG*DKRHIKSGRICAVF
Trigger: AAACACTGCACAAATCCTGCCACTCTTGATGTGCCGCTTGTCTCAGCCTTGGCAGAGGCTGAGTCTGTTCCTGTGCCCACCTGTCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR CCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTaGAGTCAGGATACAGACCCAGGTGCTCTCACTATGAATTGCAGG +
Preference number: 1 (lower is better)
Translates to: KGPERYSDSVPPHLE*SQDTDPGALTMNCR
Trigger: CCTGCAATTCATAGTGAGAGCACCTGGGTCTGTATCCTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR CCA 90 bp ATGCGGTTCCTCTCTACTAGATTCACCAGGTGCAAGAAGAATTCCTaGGCATCTTGCTGCCTGTTAGAGGAGAATTCCGGGTGGCTCTTG +
Preference number: 1 (lower is better)
Translates to: MRFLSTRFTRCKKNS*ASCCLLEENSGWLL
Trigger: CAAGAGCCACCCGGAATTCTCCTCTAACAGGCAGCAAGATGCCCAGGAATTCTTCTTGCACCTGGTGAATCTAGTAGAGAGGAACCGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR TCA 90 bp TCCCGTTCTGCTGTGGCTTGTGCTCCTCCTTCATCACCTGTTCAATaGGTTCAGATTTCACCGGAGGCTTTGAATACTGGCCTGAGAGAA +
Preference number: 1 (lower is better)
Translates to: SRSAVACAPPSSPVQ*VQISPEALNTGLRE
Trigger: TTCTCTCAGGCCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGAGGAGCACAAGCCACAGCAGAACGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR TCA 90 bp TCTGAAACCATTACCACACACTTGGAGCTGGAAGCACCCAGTGAATaGGAGGCTTTCAAGATCTTCCTTTCCCTCGAGTTCTTGCAGGTC +
Preference number: 1 (lower is better)
Translates to: SETITTHLELEAPSE*EAFKIFLSLEFLQV
Trigger: GACCTGCAAGAACTCGAGGGAAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
3UTR GCA 90 bp ACATTAGGAGGTGACACCAGTGGGCACACTTTGGTAGAAAAGTACTaGACCGTGAGCTCCCTCCTTCTGCCAATCTCATTTGTTCCCAAA +
Preference number: 1 (lower is better)
Translates to: TLGGDTSGHTLVEKY*TVSSLLLPISFVPK
Trigger: TTTGGGAACAAATGAGATTGGCAGAAGGAGGGAGCTCACGGTGCAGTACTTTTCTACCAAAGTGTGCCCACTGGTGTCACCTCCTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR TCA 90 bp AGTCTAACCCACTTGTTTCAAATGAAAAGGCCCAGAGAGGTACAGTaGTTCAGTCCCACCTCACTTAGAGTGGAGTCAGGATACAGACCC +
Preference number: 1 (lower is better)
Translates to: SLTHLFQMKRPREVQ*FSPTSLRVESGYRP
Trigger: GGGTCTGTATCCTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTTTCATTTGAAACAAGTGGGTTAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR CCA 90 bp GTTTCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTaGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTCCC +
Preference number: 1 (lower is better)
Translates to: VSLQIPLKPLPHTWS*KHPVNERLSRSSFP
Trigger: GGGAAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
3UTR CCA 90 bp ATTTCGCTGAAATCCCATGGAGGTGATGATAGCTACGATTTCCTCTaGAGGTTGGTTATCCAGTCCAGAAGCACCAAAAACAGAGGCTCC +
Preference number: 1 (lower is better)
Translates to: ISLKSHGGDDSYDFL*RLVIQSRSTKNRGS
Trigger: GGAGCCTCTGTTTTTGGTGCTTCTGGACTGGATAACCAACCTCCAGAGGAAATCGTAGCTATCATCACCTCCATGGGATTTCAGCGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679768.1
ENST00000679893.1
ENST00000680905.1
ENST00000681098.1
3UTR CCA 90 bp ATCAACATTTTCTGGTTCAGAGAAGGCCTGAAGGCAGGCACTAAATaGTATCTTGGCACGTACCAACTCAGGAAGGGGTCTTCTGTTTGC +
Preference number: 1 (lower is better)
Translates to: INIFWFREGLKAGTK*YLGTYQLRKGSSVC
Trigger: GCAAACAGAAGACCCCTTCCTGAGTTGGTACGTGCCAAGATACCATTTAGTGCCTGCCTTCAGGCCTTCTCTGAACCAGAAAATGTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
3UTR TCA 90 bp TCACACATATATATGTACAACCTTCTGAGTCCCCCAACAGGACTCTaGGTTCACAAGCAGGGGAGCAGGTTTAGACTATCTTTATGGGGG +
Preference number: 1 (lower is better)
Translates to: SHIYMYNLLSPPTGL*VHKQGSRFRLSLWG
Trigger: CCCCCATAAAGATAGTCTAAACCTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATATATATGTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
3UTR CCA 90 bp AGCCGTCAGTCAGATTCAACCAGAGGTTTTCTCGCAGGTCGCATCTaGCACACTTCCAACCACATCTCTATTTTTACAAACGGAGAAATG +
Preference number: 1 (lower is better)
Translates to: SRQSDSTRGFLAGRI*HTSNHISIFTNGEM
Trigger: CATTTCTCCGTTTGTAAAAATAGAGATGTGGTTGGAAGTGTGCCAGATGCGACCTGCGAGAAAACCTCTGGTTGAATCTGACTGACGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681299.1
3UTR CCA 90 bp TCTGGAAGTTCTTCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATaGTTGATATCAAGTAGGTCTGGCATATCAATAGAAACATCAAAT +
Preference number: 1 (lower is better)
Translates to: SGSSSSPGCNPLARR*LISSRSGISIETSN
Trigger: ATTTGATGTTTCTATTGATATGCCAGACCTACTTGATATCAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGAAGAACTTCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679954.1
3UTR TCA 90 bp GCACCATCTACTACAACCCACCATGGCATACCACATTCTACTCATTaGAGGTTCACTGTAACCAATCTCACTGTATCCTCAAAGCATGAT +
Preference number: 1 (lower is better)
Translates to: APSTTTHHGIPHSTH*RFTVTNLTVSSKHD
Trigger: ATCATGCTTTGAGGATACAGTGAGATTGGTTACAGTGAACCTTCAATGAGTAGAATGTGGTATGCCATGGTGGGTTGTAGTAGATGGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR CCA 90 bp GTTTCTTTGCATCTAAAATCCTTAGTGTGTCCAAGATCACACTGTTaGTCACATCAGACAAGCAATGAAGGCAAGTCAGAAGGTGATACA +
Preference number: 1 (lower is better)
Translates to: VSLHLKSLVCPRSHC*SHQTSNEGKSEGDT
Trigger: TGTATCACCTTCTGACTTGCCTTCATTGCTTGTCTGATGTGACCAACAGTGTGATCTTGGACACACTAAGGATTTTAGATGCAAAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR CAA 90 bp TTGAAGGCCACCTCGGCGCCCATATTTCCAGTGAAGTACACAGCCTaGCGACATGCTTCCAGCGGGAAACCCATCTCGGCCAGCTGCATC +
Preference number: 2 (lower is better)
Translates to: LKATSAPIFPVKYTA*RHASSGKPISASCI
Trigger: GATGCAGCTGGCCGAGATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGTGTACTTCACTGGAAATATGGGCGCCGAGGTGGCCTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
3UTR-3UTR TCA 90 bp CCGCCTCCATGGCCACAGGTAACTGCATCAGGTAATCCACCCTCTCCGTGTAGCATCGCTTGGGTTTTCTaGGCCGATGCGGTTCCTCTC +
Preference number: 2 (lower is better)
Translates to: PPPWPQVTASGNPPSPCSIAWVF*ADAVPL
Trigger: GAGAGGAACCGCATCGGCTCAGAAAACCCAAGCGAT...GCTACACGGAGAGGGTGGATTACCTGATGCAGTTACCTGTGGCCATGGAGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR-3UTR GCA 90 bp GGGAAGGTTTCCTACATACCCAGTCTCTGTAGAAGGCAGGCCAGAGAAAAGGTGCAGGGAGGTGCCGCGTaGCCTGGTCTGCATGGAAGG +
Preference number: 2 (lower is better)
Translates to: GKVSYIPSLCRRQAREKVQGGAA*PGLHGR
Trigger: CCTTCCATGCAGACCAGGGCACGCGGCACCTCCCTG...CACCTTTTCTCTGGCCTGCCTTCTACAGAGACTGGGTATGTAGGAAACCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680605.1
3UTR-3UTR GCA 90 bp TCTCCGTGTAGCGGACTTTCCGGGTCTGACAGCACTGAATGCGTTCTTCCACCAGGAGAGATCCCGTTCTaGTGTGGCTTGTGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: SPCSGLSGSDSTECVLPPGEIPF*CGLCSS
Trigger: GGAGGAGCACAAGCCACAGCAGAACGGGATCTCTCC...TGGTGGAAGAACGCATTCAGTGCTGTCAGACCCGGAAAGTCCGCTACACGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR-3UTR TCA 90 bp CTCCAGCAGAAGCTGCCCCTCCATAACCAGGCATGGTCAGCGGCTCAGCAAAATCGCCCATATTTCCAGTaGAGTACACAGCCTTGCGAC +
Preference number: 2 (lower is better)
Translates to: LQQKLPLHNQAWSAAQQNRPYFQ*STQPCD
Trigger: GTCGCAAGGCTGTGTACTTCACTGGAAATATGGGCG...ATTTTGCTGAGCCGCTGACCATGCCTGGTTATGGAGGGGCAGCTTCTGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
3UTR-3UTR GCA 90 bp CCGCCTCCATGGCCACAGGTAACTGCATCAGGTAATCCACCCTCTCCGTGTAGCTTCTGCTGTGGCTTGTaGTCCTCCTTCATCACCTGT +
Preference number: 2 (lower is better)
Translates to: PPPWPQVTASGNPPSPCSFCCGL*SSFITC
Trigger: ACAGGTGATGAAGGAGGAGCACAAGCCACAGCAGAA...GCTACACGGAGAGGGTGGATTACCTGATGCAGTTACCTGTGGCCATGGAGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR-3UTR CCA 90 bp GGTAGCCCATGTCTCTGTAATGCTCCAGCGCATGCCCGTTGCCCCCAGAGCTGTACTCCATTGTCCAGCTaGGTGAGGTTGTTGGCATAT +
Preference number: 2 (lower is better)
Translates to: GSPCLCNAPAHARCPQSCTPLSS*VRLLAY
Trigger: ATATGCCAACAACCTCACCCAGCTGGACAATGGAGT...ACAGCTCTGGGGGCAACGGGCATGCGCTGGAGCATTACAGAGACATGGGCTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679350.1
ENST00000681128.1
3UTR-3UTR CCA 90 bp CAGATGAGGACAGTGAGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTGTCTCTCGGTCACATaGCACCAAAGGATCACCCCA +
Preference number: 2 (lower is better)
Translates to: QMRTVRHRTDEGLAQGPQCLSVT*HQRITP
Trigger: TGGGGTGATCCTTTGGTGCCATGTGACCGAGAGACA...CTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCTCACTGTCCTCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680734.1
ENST00000681736.1
ENST00000681918.1
3UTR-3UTR CCA 90 bp AGGTTTCCTACATACCCAGTCTCTGTAGAAGGCAGGCCAGAGAAAAGGTGGCAATGGACTGGACCTAGATaGGGCAGGGAGGTGCCGCGT +
Preference number: 2 (lower is better)
Translates to: RFPTYPVSVEGRPEKRWQWTGPR*GREVPR
Trigger: ACGCGGCACCTCCCTGCCCCATCTAGGTCCAGTCCA...TTGCCACCTTTTCTCTGGCCTGCCTTCTACAGAGACTGGGTATGTAGGAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680605.1
3UTR-3UTR CCA 90 bp GTTGCCCCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCTCGCAGGTCGCATCTaGCACACTTCCAACCACATC +
Preference number: 2 (lower is better)
Translates to: VAPRAVKEPLSTQDRAVSLAGRI*HTSNHI
Trigger: GATGTGGTTGGAAGTGTGCCAGATGCGACCTGCGAG...ACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681299.1
3UTR-3UTR CCA 90 bp GCGCATGCCCGTTGCCCCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACAGATTTTCCCACGTGTCTaGGTCCTGCTTTCTGTATGG +
Preference number: 2 (lower is better)
Translates to: AHARCPQSCQRTTFHTGQIFPRV*VLLSVW
Trigger: CCATACAGAAAGCAGGACCCAGACACGTGGGAAAAT...CTGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679350.1
ENST00000681128.1
3UTR-3UTR CCA 90 bp GGCTCCAGCAGAAGCTGCCCCTCCATAACCAGGCATGGTCAGCGGCTCAGCAAAATTTCCTCTGGAGGTTaGTTATCCAGTCCAGAAGCA +
Preference number: 2 (lower is better)
Translates to: GSSRSCPSITRHGQRLSKISSGG*LSSPEA
Trigger: TGCTTCTGGACTGGATAACCAACCTCCAGAGGAAAT...TTTGCTGAGCCGCTGACCATGCCTGGTTATGGAGGGGCAGCTTCTGCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
3UTR-3UTR TCA 90 bp GTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGGGGAGCAGGCAGGTCTGGGTCTATaGGAGAAAACTGCTTCTGCA +
Preference number: 2 (lower is better)
Translates to: VQPSESPNRTLSSQAGEQAGLGL*EKTASA
Trigger: TGCAGAAGCAGTTTTCTCTCATAGACCCAGACCTGC...CTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602704.2
3UTR-3UTR GCA 90 bp CCTGTTAGAGGAGAATTCCGGGTGGCTCTTGCTTACAAAGGCCTTAAACATGCGGGAGAGATCCCGTTCTaGTGTGGCTTGTGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: PVRGEFRVALAYKGLKHAGEIPF*CGLCSS
Trigger: GGAGGAGCACAAGCCACAGCAGAACGGGATCTCTCC...CGCATGTTTAAGGCCTTTGTAAGCAAGAGCCACCCGGAATTCTCCTCTAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR-3UTR CCA 90 bp GCCCATGTCTCTGTAATGCTCCAGCGCATGCCCGTTGCCCCCAGAGCTGTCAAAACACTTCCAACCACTTaGAGGAATCCTGACTCCATT +
Preference number: 2 (lower is better)
Translates to: AHVSVMLQRMPVAPRAVKTLPTT*RNPDSI
Trigger: AATGGAGTCAGGATTCCTCCAAGTGGTTGGAAGTGT...TTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGAGCATTACAGAGACATGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679350.1
ENST00000681128.1
3UTR-3UTR CCA 90 bp CTTCCAACCACTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGTTCTCGCAGGTCGCATCTaGCACACTTCCAACCACTTG +
Preference number: 2 (lower is better)
Translates to: LPTTWRNPDSIVQLGEVVLAGRI*HTSNHL
Trigger: CAAGTGGTTGGAAGTGTGCCAGATGCGACCTGCGAG...AACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTGGTTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679350.1
ENST00000681128.1
3UTR-3UTR GCA 90 bp GTAATCCACCCTCTCCGTGTAGCGGACTTTCCGGGTCTGACAGCACTGAATGCGACTAGATTCACCAGGTaGAAGAAGAATTCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: VIHPLRVADFPGLTALNATRFTR*KKNSWA
Trigger: TGCCCAGGAATTCTTCTTGCACCTGGTGAATCTAGT...CGCATTCAGTGCTGTCAGACCCGGAAAGTCCGCTACACGGAGAGGGTGGATTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR-3UTR CCA 90 bp CTGCATCAGGTAATCCACCCTCTCCGTGTAGCGGACTTTCCGGGTCTGACAGCATGCAAGAAGAATTCCTaGGCATCTTGCTGCCTGTTA +
Preference number: 2 (lower is better)
Translates to: LHQVIHPLRVADFPGLTACKKNS*ASCCLL
Trigger: TAACAGGCAGCAAGATGCCCAGGAATTCTTCTTGCA...TGCTGTCAGACCCGGAAAGTCCGCTACACGGAGAGGGTGGATTACCTGATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR-3UTR GCA 90 bp CCATGGCCACAGGTAACTGCATCAGGTAATCCACCCTCTCCGTGTAGCGGACTTAATTCCTGGGCATCTTaGTGCCTGTTAGAGGAGAAT +
Preference number: 2 (lower is better)
Translates to: PWPQVTASGNPPSPCSGLNSWAS*CLLEEN
Trigger: ATTCTCCTCTAACAGGCAGCAAGATGCCCAGGAATT...AAGTCCGCTACACGGAGAGGGTGGATTACCTGATGCAGTTACCTGTGGCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR-3UTR GCA 90 bp TGTCTCTGTAATGCTCCAGCGCATGCCCGTTGCCCCCAGAGCTGTCAAAGAACCAAAAGAATAAACATCTaGCCCGTCAGGAGTGATGGT +
Preference number: 2 (lower is better)
Translates to: CLCNAPAHARCPQSCQRTKRINI*PVRSDG
Trigger: ACCATCACTCCTGACGGGGCAGATGTTTATTCTTTT...GGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGAGCATTACAGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680276.1
3UTR-3UTR CCA 90 bp CGTCAGTCAGATTCAACCAGAGGTTTTCTCGCAGGTCGCATCTGGCACACTTCCATTTTCCCACGTGTCTaGGTCCTGCTTTCTGTATGG +
Preference number: 2 (lower is better)
Translates to: RQSDSTRGFLAGRIWHTSIFPRV*VLLSVW
Trigger: CCATACAGAAAGCAGGACCCAGACACGTGGGAAAAT...GGAAGTGTGCCAGATGCGACCTGCGAGAAAACCTCTGGTTGAATCTGACTGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679350.1
ENST00000681128.1
3UTR-3UTR CCA 90 bp TCTCCGTGTAGCGGACTTTCCGGGTCTGACAGCACTGAATGCGTTCTTCCACCATGCAAGAAGAATTCCTaGGCATCTTGCTGCCTGTTA +
Preference number: 2 (lower is better)
Translates to: SPCSGLSGSDSTECVLPPCKKNS*ASCCLL
Trigger: TAACAGGCAGCAAGATGCCCAGGAATTCTTCTTGCA...TGGTGGAAGAACGCATTCAGTGCTGTCAGACCCGGAAAGTCCGCTACACGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR-3UTR CCA 90 bp CTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGTTGGCATATTTACTCGCAGGTCGCATCTaGCACACTTCCAACCACTTG +
Preference number: 2 (lower is better)
Translates to: LGGILTPLSSWVRLLAYLLAGRI*HTSNHL
Trigger: CAAGTGGTTGGAAGTGTGCCAGATGCGACCTGCGAG...TAAATATGCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679350.1
ENST00000681128.1
3UTR-3UTR TCA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCTCAGAAGGTGTCAACTaGTCGTGCTCTTTAAATAAA +
Preference number: 2 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSSEGVN*SCSLNK
Trigger: TTTATTTAAAGAGCACGATCAGTTGACACCTTCTGA...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR CCA 90 bp CTCAACAATACCATTGTTCAGATGAGGACAGTGAGGCACAGGACGGATGAAGGATGTCTCTCGGTCACATaGCACCAAAGGATCACCCCA +
Preference number: 2 (lower is better)
Translates to: LNNTIVQMRTVRHRTDEGCLSVT*HQRITP
Trigger: TGGGGTGATCCTTTGGTGCCATGTGACCGAGAGACA...TCCTTCATCCGTCCTGTGCCTCACTGTCCTCATCTGAACAATGGTATTGTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680734.1
3UTR-3UTR CCA 90 bp CTCTGTAATGCTCCAGCGCATGCCCGTTGCCCCCAGAGCTGTCAAAGAACCACTTTACAAACGGAGAAATaGAGGTCCAGAAGTAACTCT +
Preference number: 2 (lower is better)
Translates to: LCNAPAHARCPQSCQRTTLQTEK*RSRSNS
Trigger: AGAGTTACTTCTGGACCTCCATTTCTCCGTTTGTAA...AGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGAGCATTACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681299.1
3UTR CAA 90 bp CCACTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGTaGGCATATTTAGATACTGGCAATTCATTTTCCCACGTGTCTGGG +
Preference number: 2 (lower is better)
Translates to: PLGGILTPLSSWVRL*AYLDTGNSFSHVSG
Trigger: CCCAGACACGTGGGAAAATGAATTGCCAGTATCTAAATATGCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497380.1
ENST00000679350.1
ENST00000681128.1
3UTR-3UTR TCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGTTGGGGCACTTGACATaGCTCCAAAGAGTTATCATG +
Preference number: 2 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQLGHLT*LQRVIM
Trigger: CATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAA...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR TCA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGTCACACCCAGAATCCTaGTTGTTCACAACTCACTAC +
Preference number: 2 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMSHPES*LFTTHY
Trigger: GTAGTGAGTTGTGAACAATCAGGATTCTGGGTGTGA...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR TCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGTCACACCCAGAATCCTaGTTGTTCACAACTCACTAC +
Preference number: 2 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQSHPES*LFTTHY
Trigger: GTAGTGAGTTGTGAACAATCAGGATTCTGGGTGTGA...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR TCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGTGTATCCTCAAAGCATaGTTGAAAGAGAGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQCILKA*LKERAG
Trigger: ACCTGCCCTCTCTTTCAATCATGCTTTGAGGATACA...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR TCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGGGAGTCATTATTCTATaGCACTCACTCTGCCCTAAG +
Preference number: 2 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQGVIIL*HSLCPK
Trigger: CTTAGGGCAGAGTGAGTGTCATAGAATAATGACTCC...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR TCA 90 bp CACTTCCAACCACTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGTCTGTATGGAGATTTTaGGCTGAGAACTGCATCACA +
Preference number: 2 (lower is better)
Translates to: HFQPLGGILTPLSSWVRLSVWRF*AENCIT
Trigger: TGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGA...CAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTGGTTGGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497380.1
ENST00000679350.1
ENST00000681128.1
3UTR-3UTR TCA 90 bp GGAGAATTCCGGGTGGCTCTTGCTTACAAAGGCCTTAAACATGCGCGGAGAGATTCATCACCTGTTCAATaGGTTCAGATTTCACCGGAG +
Preference number: 2 (lower is better)
Translates to: GEFRVALAYKGLKHARRDSSPVQ*VQISPE
Trigger: CTCCGGTGAAATCTGAACTCATTGAACAGGTGATGA...ATCTCTCCGCGCATGTTTAAGGCCTTTGTAAGCAAGAGCCACCCGGAATTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR-3UTR GCA 90 bp AGCGCATGCCCGTTGCCCCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACAATATCAATTCCAAAATaGGCTAAGTGCTTGGCCAAA +
Preference number: 2 (lower is better)
Translates to: SACPLPPELSKNHFPHRTISIPK*AKCLAK
Trigger: TTTGGCCAAGCACTTAGCGCATTTTGGAATTGATAT...TGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680276.1
3UTR-3UTR GCA 90 bp ACATCGCTTGGGTTTTCTGAGCCGATGCGGTTCCTCTCTACTAGATTCACCAGGAATTCCTGGGCATCTTaGTGCCTGTTAGAGGAGAAT +
Preference number: 2 (lower is better)
Translates to: TSLGFSEPMRFLSTRFTRNSWAS*CLLEEN
Trigger: ATTCTCCTCTAACAGGCAGCAAGATGCCCAGGAATT...CCTGGTGAATCTAGTAGAGAGGAACCGCATCGGCTCAGAAAACCCAAGCGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR-3UTR GCA 90 bp CTGAATAGCCTGATTTCGCTGAAATCCCATGGAGGTGATGATAGCTACGATTTCCACAGCCTTGCGACATaGTTCCAGCGGGAAACCCAT +
Preference number: 2 (lower is better)
Translates to: LNSLISLKSHGGDDSYDFHSLAT*FQRETH
Trigger: ATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGTG...GAAATCGTAGCTATCATCACCTCCATGGGATTTCAGCGAAATCAGGCTATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
3UTR-3UTR CCA 90 bp GACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTTGATGTCATTGTCCTGGAATGCGCTAAGTGCTTaGCCAAATGAGGATCCAAAA +
Preference number: 2 (lower is better)
Translates to: DSWITSHSLTLSLMSLSWNALSA*PNEDPK
Trigger: TTTTGGATCCTCATTTGGCCAAGCACTTAGCGCATT...CCAGGACAATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680055.1
3UTR-3UTR TCA 90 bp CACTTTCCACACAGGACAGAGCCGTCAGTCAGATTCAACCAGAGGTTTTCTCGCATGGAGATTTTGAGCTaGGAACTGCATCACAAGCAA +
Preference number: 2 (lower is better)
Translates to: HFPHRTEPSVRFNQRFSRMEILS*ELHHKQ
Trigger: TTGCTTGTGATGCAGTTCTCAGCTCAAAATCTCCAT...GCGAGAAAACCTCTGGTTGAATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679350.1
ENST00000681128.1
3UTR-3UTR CCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGCCAAGATCACACTGTTaGTCACATCAGACAAGCAAT +
Preference number: 2 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQPRSHC*SHQTSN
Trigger: ATTGCTTGTCTGATGTGACCAACAGTGTGATCTTGG...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR CCA 90 bp GATCCATCCTTGACTCTAGGTCCTTCGGGCTTGGCCTCAGAAATAATGTTTGCAAGCTACGATTTCCTCTaGAGGTTGGTTATCCAGTCC +
Preference number: 2 (lower is better)
Translates to: DPSLTLGPSGLASEIMFASYDFL*RLVIQS
Trigger: GGACTGGATAACCAACCTCCAGAGGAAATCGTAGCT...TGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAAGGATGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680905.1
ENST00000681098.1
3UTR-3UTR CCA 90 bp ATTTCGCTGAAATCCCATGGAGGTGATGATAGCTACGATTTCCTCTGGAGGTTGCTCCATAACCAGGCATaGTCAGCGGCTCAGCAAAAT +
Preference number: 2 (lower is better)
Translates to: ISLKSHGGDDSYDFLWRLLHNQA*SAAQQN
Trigger: ATTTTGCTGAGCCGCTGACCATGCCTGGTTATGGAG...CAACCTCCAGAGGAAATCGTAGCTATCATCACCTCCATGGGATTTCAGCGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
3UTR CAA 90 bp CAACCACTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTaGTTGGCATATTTAGATACTGGCAATTCATTTTCCCACGTGTCT +
Preference number: 2 (lower is better)
Translates to: QPLGGILTPLSSWVR*LAYLDTGNSFSHVS
Trigger: AGACACGTGGGAAAATGAATTGCCAGTATCTAAATATGCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497380.1
ENST00000679350.1
ENST00000681128.1
3UTR-3UTR TCA 90 bp CTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTCGCTGGAAGCACCCAGTaGATGAGAGGCTTTCAAGAT +
Preference number: 2 (lower is better)
Translates to: LESFDEVSSTILFLSKSLAGSTQ*MRGFQD
Trigger: ATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGC...GAGGGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
3UTR-3UTR GCA 90 bp TGTTTCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCATTTCCCTCGAGTTCTTaGAGGTCTGGGTCTATGAGA +
Preference number: 2 (lower is better)
Translates to: CFSPNPSETITTHLELEAFPSSS*RSGSMR
Trigger: TCTCATAGACCCAGACCTGCAAGAACTCGAGGGAAA...TGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602704.2
3UTR-3UTR GCA 90 bp AGAATAAACATAACAGCCTCGGGCAGGTCCTTCAGAAGGCATTCCAGAACAAGGGAGATGACAGGTCCATaGATGTTATTGTCCCAGAAG +
Preference number: 2 (lower is better)
Translates to: RINITASGRSFRRHSRTREMTGP*MLLSQK
Trigger: CTTCTGGGACAATAACATGCATGGACCTGTCATCTC...CCTTGTTCTGGAATGCCTTCTGAAGGACCTGCCCGAGGCTGTTATGTTTATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681109.1
3UTR-3UTR CCA 90 bp GTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGGGGAGCAGTTTAGACTATCTTTATaGGGGGACAATAAAAACTGG +
Preference number: 2 (lower is better)
Translates to: VQPSESPNRTLSSQAGEQFRLSL*GDNKNW
Trigger: CCAGTTTTTATTGTCCCCCCATAAAGATAGTCTAAA...CTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
3UTR CAA 90 bp TCATATGCTCCTGGCATTCACTTAATTCTTCATTCAATCAGTTATTaGCTGATCACTCACCATGGGCCAGGCACAGTGCTGGGGAAGCTA +
Preference number: 2 (lower is better)
Translates to: SYAPGIHLILHSISY*LITHHGPGTVLGKL
Trigger: TAGCTTCCCCAGCACTGTGCCTGGCCCATGGTGAGTGATCAGCAAATAACTGATTGAATGAAGAATTAAGTGAATGCCAGGAGCATATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679769.1
3UTR-3UTR TCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTAGAGGCTGAGGCAGGTTaGGGTCAAGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: VVDNFVSTYLGITALAKLEAEAG*GQEFKT
Trigger: GGTCTTGAACTCTTGACCTCAACCTGCCTCAGCCTC...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR TCA 90 bp AACGAAAAACATCGCTTGGGTTTTCTGAGCCGATGCGGTTCCTCTCTACTAGATTCATCACCTGTTCAATaGGTTCAGATTTCACCGGAG +
Preference number: 2 (lower is better)
Translates to: NEKHRLGFLSRCGSSLLDSSPVQ*VQISPE
Trigger: CTCCGGTGAAATCTGAACTCATTGAACAGGTGATGA...ATCTAGTAGAGAGGAACCGCATCGGCTCAGAAAACCCAAGCGATGTTTTTCGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR-3UTR GCA 90 bp GACTCCATTGTCCAGCTGGGTGAGGTTGTTGGCATATTTAGATACTGGCAATTCCACGTGTCTGGGTCCTaGTTTCTGTATGGAGATTTT +
Preference number: 2 (lower is better)
Translates to: DSIVQLGEVVGIFRYWQFHVSGS*FLYGDF
Trigger: AAAATCTCCATACAGAAAGCAGGACCCAGACACGTG...GAATTGCCAGTATCTAAATATGCCAACAACCTCACCCAGCTGGACAATGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497380.1
ENST00000679350.1
ENST00000681128.1
3UTR-3UTR CCA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGGTGCTTTGTTTCACCTaGTTGGTTCTGTTTATTTTC +
Preference number: 2 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMVLCFT*LVLFIF
Trigger: GAAAATAAACAGAACCAACCAGGTGAAACAAAGCAC...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR CCA 90 bp AGGTCCTTCGGGCTTGGCCTCAGAAATAATGTTTGCATTGGCATTATTCTCCATAGCTACGATTTCCTCTaGAGGTTGGTTATCCAGTCC +
Preference number: 2 (lower is better)
Translates to: RSFGLGLRNNVCIGIILHSYDFL*RLVIQS
Trigger: GGACTGGATAACCAACCTCCAGAGGAAATCGTAGCT...ATGGAGAATAATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680905.1
ENST00000681098.1
3UTR-3UTR CCA 90 bp ATTTCGCTGAAATCCCATGGAGGTGATGATAGCTACGATTTCCTCTGGAGGTTGCGGCTCAGCAAAATCTaGCTCTTCCATGTGAACAAT +
Preference number: 2 (lower is better)
Translates to: ISLKSHGGDDSYDFLWRLRLSKI*LFHVNN
Trigger: ATTGTTCACATGGAAGAGCCAGATTTTGCTGAGCCG...CAACCTCCAGAGGAAATCGTAGCTATCATCACCTCCATGGGATTTCAGCGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
3UTR-3UTR CCA 90 bp TGGTTCAGAGAAGGCCTGAAGGCAGGCACTAAATGGTATCTTGGCACGTACCAAAGCGATCAGTTCATCTaGGTGAAAGAGCAAATCAAA +
Preference number: 2 (lower is better)
Translates to: WFREGLKAGTKWYLGTYQSDQFI*VKEQIK
Trigger: TTTGATTTGCTCTTTCACCCAGATGAACTGATCGCT...TTGGTACGTGCCAAGATACCATTTAGTGCCTGCCTTCAGGCCTTCTCTGAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681560.1
3UTR CAA 90 bp GGAAGTTCTTCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATGGTaGATATCAAGTAGGTCTGGCATATCAATAGAAACATCAAATTTT +
Preference number: 2 (lower is better)
Translates to: GSSSSPGCNPLARRW*ISSRSGISIETSNF
Trigger: AAAATTTGATGTTTCTATTGATATGCCAGACCTACTTGATATCAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGAAGAACTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679954.1
3UTR CAA 90 bp AGCTCATATGTTCCAGATCCATCCTTGACTCTAGGTCCTTCGGGCTaGGCCTCAGAAATAATGTTTGCATTGGCATTATTCTCCATCTCA +
Preference number: 2 (lower is better)
Translates to: SSYVPDPSLTLGPSG*ASEIMFALALFSIS
Trigger: TGAGATGGAGAATAATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAAGGATGGATCTGGAACATATGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681362.1
3UTR-3UTR TCA 90 bp CATATATATGTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCACTCTCCAAATCCCTCTaGAACCATTACCACACACTT +
Preference number: 2 (lower is better)
Translates to: HIYVQPSESPNRTLSSQALSKSL*NHYHTL
Trigger: AAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAG...TGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATATATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
3UTR-3UTR TCA 90 bp AGAATAAACATAACAGCCTCGGGCAGGTCCTTCAGAAGGCATTCCAGAACAAGGTGTTATCATAGGAGATaGCAGGTCCATGCATGTTAT +
Preference number: 2 (lower is better)
Translates to: RINITASGRSFRRHSRTRCYHRR*QVHACY
Trigger: ATAACATGCATGGACCTGTCATCTCCTATGATAACA...CCTTGTTCTGGAATGCCTTCTGAAGGACCTGCCCGAGGCTGTTATGTTTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681109.1
3UTR-3UTR GCA 90 bp AAACTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCTTTCCCTCGAGTTCTTaGAGGTCTGGGTCTGCTTCT +
Preference number: 2 (lower is better)
Translates to: KLESFDEVSSTILFLSKSFPSSS*RSGSAS
Trigger: AGAAGCAGACCCAGACCTGCAAGAACTCGAGGGAAA...GGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
3UTR-3UTR CCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGTATATGAAACACAAGTaGGCTTTTCATTTGTTGTGG +
Preference number: 2 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQYMKHK*AFHLLW
Trigger: CCACAACAAATGAAAAGCCCACTTGTGTTTCATATA...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR CCA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGCCAAGATCACACTGTTaGTCACATCAGACAAGCAAT +
Preference number: 2 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWPRSHC*SHQTSN
Trigger: ATTGCTTGTCTGATGTGACCAACAGTGTGATCTTGG...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR CCA 90 bp ACAAAATCACTGTCTTCTTCAAACTCAGGGTGGCTAAAGATCCAATCCAGTGCTATTTCCTCTGGAGGTTaGTTATCCAGTCCAGAAGCA +
Preference number: 2 (lower is better)
Translates to: TKSLSSSNSGWLKIQSSAISSGG*LSSPEA
Trigger: TGCTTCTGGACTGGATAACCAACCTCCAGAGGAAAT...AGCACTGGATTGGATCTTTAGCCACCCTGAGTTTGAAGAAGACAGTGATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680905.1
ENST00000681098.1
3UTR-3UTR TCA 90 bp TTGCAGAGGCTCTATTATGGACAGAGCATAATATCTACATGGATACATCAGAAACCATTTTTGATGTGCTaGTGGCAGATCCTCCACCAG +
Preference number: 2 (lower is better)
Translates to: LQRLYYGQSIISTWIHQKPFLMC*WQILHQ
Trigger: CTGGTGGAGGATCTGCCATCAGCACATCAAAAATGG...TTTCTGATGTATCCATGTAGATATTATGCTCTGTCCATAATAGAGCCTCTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR TCA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGAGAGGCCACTATCACTaGCCCCCAAAGCAAAATAGA +
Preference number: 2 (lower is better)
Translates to: KITDKFGALDMTPKSYHVRGHYH*PPKQNR
Trigger: TCTATTTTGCTTTGGGGGTCAGTGATAGTGGCCTCT...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR TCA 90 bp GCATATGAAGCATATCAATTCCAAAATGCGCTAAGTGCTTGGCCAAATGAGGATAAGTGCTTGGCCAAATaGGGATCCAAAACAGGTTCT +
Preference number: 2 (lower is better)
Translates to: AYEAYQFQNALSAWPNEDKCLAK*GSKTGS
Trigger: AGAACCTGTTTTGGATCCTCATTTGGCCAAGCACTT...ATCCTCATTTGGCCAAGCACTTAGCGCATTTTGGAATTGATATGCTTCATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000680055.1
ENST00000680276.1
ENST00000681109.1
3UTR-3UTR CCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTATGTCTCTCGGTCACATaGCACCAAAGGATCACCTAT +
Preference number: 2 (lower is better)
Translates to: VVDNFVSTYLGITALAKLCLSVT*HQRITY
Trigger: ATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACA...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR TCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTATTGGGGCACTTGACATaGCTCCAAAGAGTTATCATG +
Preference number: 2 (lower is better)
Translates to: VVDNFVSTYLGITALAKLLGHLT*LQRVIM
Trigger: CATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAA...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR TCA 90 bp TTAATTCTTCATTCAATCAGTTATTTGCTGATCACTCACCATGGGCCAGGCACACTGGGGAAGCTACTTTaGAAACATTTGTGGTTCTGT +
Preference number: 2 (lower is better)
Translates to: LILHSISYLLITHHGPGTLGKLL*KHLWFC
Trigger: ACAGAACCACAAATGTTTTCAAAGTAGCTTCCCCAG...TGTGCCTGGCCCATGGTGAGTGATCAGCAAATAACTGATTGAATGAAGAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679769.1
3UTR-3UTR GCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTACTAACCCAATGTCTGTaGTTTGTTTCACCTGGTTGG +
Preference number: 2 (lower is better)
Translates to: VVDNFVSTYLGITALAKLLTQCL*FVSPGW
Trigger: CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAG...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR CCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTATACTACAACCCACCATaGCATACCACATTCTACTCA +
Preference number: 2 (lower is better)
Translates to: VVDNFVSTYLGITALAKLYYNPP*HTTFYS
Trigger: TGAGTAGAATGTGGTATGCCATGGTGGGTTGTAGTA...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR TCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTACTTCTCGAAGGTTCCTaGGTCATAGTTTTGTTAAAA +
Preference number: 2 (lower is better)
Translates to: VVDNFVSTYLGITALAKLLLEGS*VIVLLK
Trigger: TTTTAACAAAACTATGACTCAGGAACCTTCGAGAAG...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR TCA 90 bp TTGCAGAGGCTCTATTATGGACAGAGCATAATATCTACATGGATACATCAGAAATCAGAAGGTGTCAACTaGTCGTGCTCTTTAAATAAA +
Preference number: 2 (lower is better)
Translates to: LQRLYYGQSIISTWIHQKSEGVN*SCSLNK
Trigger: TTTATTTAAAGAGCACGATCAGTTGACACCTTCTGA...TTTCTGATGTATCCATGTAGATATTATGCTCTGTCCATAATAGAGCCTCTGCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR CCA 72 bp GGCTTCGCAGCGCACACTGAGTGGACTGGACCTAGATaGGGCAGGGAGGTGCCGCGTGCCCTGGTCTGCATG +
Preference number: 3 (lower is better)
Translates to: GFAAHTEWTGPR*GREVPRALVCM
Trigger: CATGCAGACCAGGGCACGCGGCACCTCCCTGCCCCATCTAGGTCCAGTCCACTCAGTGTGCGCTGCGAAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680605.1
3UTR TCA 72 bp GGTGGGCACAGGAACAGACTCAGCCTCTGCCAAGGCTaGGACAAGCGGCACATCAAGAGTGGCAGGATTTGT +
Preference number: 3 (lower is better)
Translates to: GGHRNRLSLCQG*DKRHIKSGRIC
Trigger: ACAAATCCTGCCACTCTTGATGTGCCGCTTGTCTCAGCCTTGGCAGAGGCTGAGTCTGTTCCTGTGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR CCA 72 bp AGGCTCCAGCAGAAGCTGCCCCTCCATAACCAGGCATaGTCAGCGGCTCAGCAAAATCTGGCTCTTCCATGT +
Preference number: 3 (lower is better)
Translates to: RLQQKLPLHNQA*SAAQQNLALPC
Trigger: ACATGGAAGAGCCAGATTTTGCTGAGCCGCTGACCATGCCTGGTTATGGAGGGGCAGCTTCTGCTGGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
3UTR-3UTR CAA 90 bp TCCAGCGCATGCCCGTTGCCCCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACCACTGGAAAGCCATaGGAGAGTAGTCAGAACAGC +
Preference number: 3 (lower is better)
Translates to: SSACPLPPELSKNHFPHRTTGKP*ESSQNS
Trigger: GCTGTTCTGACTACTCTCCAATGGCTTTCCAGTGGT...CCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680276.1
3UTR GCA 72 bp AGCCCATGTCTCTGTAATGCTCCAGCGCATGCCCGTTaGCCCCAGAGCTGTCAAAGAACCACTTTCCACACA +
Preference number: 3 (lower is better)
Translates to: SPCLCNAPAHAR*PQSCQRTTFHT
Trigger: TGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGAGCATTACAGAGACATGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
3UTR-3UTR CAA 90 bp GTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGGGGAGCAGACCATTACCACACACTaGGAGCTGGAAGCACCCAGT +
Preference number: 3 (lower is better)
Translates to: VQPSESPNRTLSSQAGEQTITTH*ELEAPS
Trigger: ACTGGGTGCTTCCAGCTCCAAGTGTGTGGTAATGGT...CTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
3UTR CCA 72 bp CCTCTGCCAAGGCTGAGACAAGCGGCACATCAAGAGTaGCAGGATTTGTGCAGTGTTTCAACACACCCAGCT +
Preference number: 3 (lower is better)
Translates to: PLPRLRQAAHQE*QDLCSVSTHPA
Trigger: AGCTGGGTGTGTTGAAACACTGCACAAATCCTGCCACTCTTGATGTGCCGCTTGTCTCAGCCTTGGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR CAA 90 bp CTCTGTAATGCTCCAGCGCATGCCCGTTGCCCCCAGAGCTGTCAAAGAACCACTCTGCATCACAAGCAATaGTTACCAGGGCTGGTAACT +
Preference number: 3 (lower is better)
Translates to: LCNAPAHARCPQSCQRTTLHHKQ*LPGLVT
Trigger: AGTTACCAGCCCTGGTAACAATTGCTTGTGATGCAG...AGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGAGCATTACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679350.1
3UTR-3UTR CAA 90 bp CGGCTCAGCAAAATCTGGCTCTTCCATGTGAACAATGATCCAGTTGAAGGCCACGTGAAGTACACAGCCTaGCGACATGCTTCCAGCGGG +
Preference number: 3 (lower is better)
Translates to: RLSKIWLFHVNNDPVEGHVKYTA*RHASSG
Trigger: CCCGCTGGAAGCATGTCGCAAGGCTGTGTACTTCAC...GTGGCCTTCAACTGGATCATTGTTCACATGGAAGAGCCAGATTTTGCTGAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
3UTR CCA 72 bp TGGGCATCTTGCTGCCTGTTAGAGGAGAATTCCGGGTaGCTCTTGCTTACAAAGGCCTTAAACATGCGCGGA +
Preference number: 3 (lower is better)
Translates to: WASCCLLEENSG*LLLTKALNMRG
Trigger: TCCGCGCATGTTTAAGGCCTTTGTAAGCAAGAGCCACCCGGAATTCTCCTCTAACAGGCAGCAAGATGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR-3UTR CAA 90 bp GAAGCAAAGCGAGATGTTTTCACACCCGCAGACTTTGCTTGTAGGGCACTGCTCGAAGGGGTCTTCTGTTaGCTTCTGCTTCCCTTCTCG +
Preference number: 3 (lower is better)
Translates to: EAKRDVFTPADFACRALLEGVFC*LLLPFS
Trigger: CGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTC...GAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGAAAACATCTCGCTTTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
3UTR-3UTR CAA 90 bp TTCTGGTTCAGAGAAGGCCTGAAGGCAGGCACTAAATGGTATCTTGGCACGTACGAAGGGGTCTTCTGTTaGCTTCTGCTTCCCTTCTCG +
Preference number: 3 (lower is better)
Translates to: FWFREGLKAGTKWYLGTYEGVFC*LLLPFS
Trigger: CGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTC...GTACGTGCCAAGATACCATTTAGTGCCTGCCTTCAGGCCTTCTCTGAACCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
3UTR-3UTR CAA 90 bp ATTTCGCTGAAATCCCATGGAGGTGATGATAGCTACGATTTCCTCTGGAGGTTGGTGAAGTACACAGCCTaGCGACATGCTTCCAGCGGG +
Preference number: 3 (lower is better)
Translates to: ISLKSHGGDDSYDFLWRLVKYTA*RHASSG
Trigger: CCCGCTGGAAGCATGTCGCAAGGCTGTGTACTTCAC...CAACCTCCAGAGGAAATCGTAGCTATCATCACCTCCATGGGATTTCAGCGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
3UTR-3UTR CAA 90 bp GATCCATCCTTGACTCTAGGTCCTTCGGGCTTGGCCTCAGAAATAATGTTTGCAGTTCCAGATCCATCCTaGACTCTAGGTCCTTCGGGC +
Preference number: 3 (lower is better)
Translates to: DPSLTLGPSGLASEIMFAVPDPS*TLGPSG
Trigger: GCCCGAAGGACCTAGAGTCAAGGATGGATCTGGAAC...TGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAAGGATGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681362.1
3UTR CCA 72 bp TCAGATTCAACCAGAGGTTTTCTCGCAGGTCGCATCTaGCACACTTCCAACCACTGGAAAGCCATTGGAGAG +
Preference number: 3 (lower is better)
Translates to: SDSTRGFLAGRI*HTSNHWKAIGE
Trigger: CTCTCCAATGGCTTTCCAGTGGTTGGAAGTGTGCCAGATGCGACCTGCGAGAAAACCTCTGGTTGAATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680276.1
3UTR CCA 72 bp TTCTGGTTCAGAGAAGGCCTGAAGGCAGGCACTAAATaGTATCTTGGCACGTACCAACTCAGGAAGGGGTCT +
Preference number: 3 (lower is better)
Translates to: FWFREGLKAGTK*YLGTYQLRKGS
Trigger: AGACCCCTTCCTGAGTTGGTACGTGCCAAGATACCATTTAGTGCCTGCCTTCAGGCCTTCTCTGAACCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
3UTR-3UTR CAA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGAAGTGGGCTTTTCATTaGTTGTGGGTAAGGCCACAC +
Preference number: 3 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQKWAFH*LWVRPH
Trigger: GTGTGGCCTTACCCACAACAAATGAAAAGCCCACTT...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR TCA 72 bp GCTGTGGCTTGTGCTCCTCCTTCATCACCTGTTCAATaGGTTCAGATTTCACCGGAGGCTTTGAATACTGGC +
Preference number: 3 (lower is better)
Translates to: AVACAPPSSPVQ*VQISPEALNTG
Trigger: GCCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGAGGAGCACAAGCCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR TCA 72 bp CTTCTTGAAAAGAATAAACATCTGCCCCGTCAGGAGTaGTGGTTCCCAGTTTCACGGCTAGTGGGTAGCCCA +
Preference number: 3 (lower is better)
Translates to: LLEKNKHLPRQE*WFPVSRLVGSP
Trigger: TGGGCTACCCACTAGCCGTGAAACTGGGAACCATCACTCCTGACGGGGCAGATGTTTATTCTTTTCAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680276.1
3UTR CCA 72 bp CTCTCTACTAGATTCACCAGGTGCAAGAAGAATTCCTaGGCATCTTGCTGCCTGTTAGAGGAGAATTCCGGG +
Preference number: 3 (lower is better)
Translates to: LSTRFTRCKKNS*ASCCLLEENSG
Trigger: CCCGGAATTCTCCTCTAACAGGCAGCAAGATGCCCAGGAATTCTTCTTGCACCTGGTGAATCTAGTAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR-3UTR CAA 90 bp ATCTTGCTGCCTGTTAGAGGAGAATTCCGGGTGGCTCTTGCTTACAAAGGCCTTATTTCACCGGAGGCTTaGAATACTGGCCTGAGAGAA +
Preference number: 3 (lower is better)
Translates to: ILLPVRGEFRVALAYKGLISPEA*NTGLRE
Trigger: TTCTCTCAGGCCAGTATTCAAAGCCTCCGGTGAAAT...AAGGCCTTTGTAAGCAAGAGCCACCCGGAATTCTCCTCTAACAGGCAGCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR-3UTR CAA 90 bp CATATATATGTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCACTTTCCCTCGAGTTCTaGCAGGTCTGGGTCTGCTTC +
Preference number: 3 (lower is better)
Translates to: HIYVQPSESPNRTLSSQALSLEF*QVWVCF
Trigger: GAAGCAGACCCAGACCTGCAAGAACTCGAGGGAAAG...TGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATATATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680008.1
3UTR TCA 72 bp AACCATTACCACACACTTGGAGCTGGAAGCACCCAGTaGATGAGAGGCTTTCAAGATCTTCCTTTCCCTCGA +
Preference number: 3 (lower is better)
Translates to: NHYHTLGAGSTQ*MRGFQDLPFPR
Trigger: TCGAGGGAAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGTGTGTGGTAATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
3UTR GCA 72 bp GAGAGGCTTTCAAGATCTTCCTTTCCCTCGAGTTCTTaGAGGTCTGGGTCTATGAGAGAAAACTGCTTCTGC +
Preference number: 3 (lower is better)
Translates to: ERLSRSSFPSSS*RSGSMRENCFC
Trigger: GCAGAAGCAGTTTTCTCTCATAGACCCAGACCTGCAAGAACTCGAGGGAAAGGAAGATCTTGAAAGCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602704.2
3UTR CCA 72 bp TCTTCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATaGTTGATATCAAGTAGGTCTGGCATATCAATAGAA +
Preference number: 3 (lower is better)
Translates to: SSSPGCNPLARR*LISSRSGISIE
Trigger: TTCTATTGATATGCCAGACCTACTTGATATCAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679954.1
3UTR-3UTR CAA 90 bp TGTTGGTTGCCGCCTCCATGGCCACAGGTAACTGCATCAGGTAATCCACCCTCTTTAGTCATCTGTGTGTaGAAATCTTGTGTTGGATCT +
Preference number: 3 (lower is better)
Translates to: CWLPPPWPQVTASGNPPSLVICV*KSCVGS
Trigger: AGATCCAACACAAGATTTCAACACACAGATGACTAA...AGAGGGTGGATTACCTGATGCAGTTACCTGTGGCCATGGAGGCGGCAACCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR-3UTR CAA 90 bp TTGCTGCCTGTTAGAGGAGAATTCCGGGTGGCTCTTGCTTACAAAGGCCTTAAAATTTCACCGGAGGCTTaGAATACTGGCCTGAGAGAA +
Preference number: 3 (lower is better)
Translates to: LLPVRGEFRVALAYKGLKISPEA*NTGLRE
Trigger: TTCTCTCAGGCCAGTATTCAAAGCCTCCGGTGAAAT...TTTAAGGCCTTTGTAAGCAAGAGCCACCCGGAATTCTCCTCTAACAGGCAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR TCA 72 bp CACTTGTTTCAAATGAAAAGGCCCAGAGAGGTACAGTaGTTCAGTCCCACCTCACTTAGAGTGGAGTCAGGA +
Preference number: 3 (lower is better)
Translates to: HLFQMKRPREVQ*FSPTSLRVESG
Trigger: TCCTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTTTCATTTGAAACAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR TCA 72 bp TGTCTGGGTCCTGCTTTCTGTATGGAGATTTTGAGCTaGGAACTGCATCACAAGCAATTGTTACCAGGGCTG +
Preference number: 3 (lower is better)
Translates to: CLGPAFCMEILS*ELHHKQLLPGL
Trigger: CAGCCCTGGTAACAATTGCTTGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGAAAGCAGGACCCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497380.1
ENST00000679350.1
3UTR TCA 72 bp CCACGTGTCTGGGTCCTGCTTTCTGTATGGAGATTTTaGGCTGAGAACTGCATCACAAGCAATTGTTACCAG +
Preference number: 3 (lower is better)
Translates to: PRVWVLLSVWRF*AENCITSNCYQ
Trigger: CTGGTAACAATTGCTTGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGAAAGCAGGACCCAGACACGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497380.1
ENST00000679350.1
3UTR TCA 72 bp TATATGTACAACCTTCTGAGTCCCCCAACAGGACTCTaGGTTCACAAGCAGGGGAGCAGGTTTAGACTATCT +
Preference number: 3 (lower is better)
Translates to: YMYNLLSPPTGL*VHKQGSRFRLS
Trigger: AGATAGTCTAAACCTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
3UTR CCA 72 bp ATGGAGGTGATGATAGCTACGATTTCCTCTGGAGGTTaGTTATCCAGTCCAGAAGCACCAAAAACAGAGGCT +
Preference number: 3 (lower is better)
Translates to: MEVMIATISSGG*LSSPEAPKTEA
Trigger: AGCCTCTGTTTTTGGTGCTTCTGGACTGGATAACCAACCTCCAGAGGAAATCGTAGCTATCATCACCTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679768.1
ENST00000679893.1
ENST00000680905.1
ENST00000681098.1
3UTR-3UTR CAA 90 bp GGAGAATTCCGGGTGGCTCTTGCTTACAAAGGCCTTAAACATGCGCGGAGAGATTTAGTCATCTGTGTGTaGAAATCTTGTGTTGGATCT +
Preference number: 3 (lower is better)
Translates to: GEFRVALAYKGLKHARRDLVICV*KSCVGS
Trigger: AGATCCAACACAAGATTTCAACACACAGATGACTAA...ATCTCTCCGCGCATGTTTAAGGCCTTTGTAAGCAAGAGCCACCCGGAATTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
3UTR TCA 72 bp GTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTCTaGAACCATTACCACACACTTGGAGCTGGAAGCACC +
Preference number: 3 (lower is better)
Translates to: VSSTILFLSKSL*NHYHTLGAGST
Trigger: GGTGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGAAACAGAATAGTCGAACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
3UTR CCA 72 bp AAATCCCATGGAGGTGATGATAGCTACGATTTCCTCTaGAGGTTGGTTATCCAGTCCAGAAGCACCAAAAAC +
Preference number: 3 (lower is better)
Translates to: KSHGGDDSYDFL*RLVIQSRSTKN
Trigger: GTTTTTGGTGCTTCTGGACTGGATAACCAACCTCCAGAGGAAATCGTAGCTATCATCACCTCCATGGGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679768.1
ENST00000679893.1
ENST00000680905.1
ENST00000681098.1
3UTR TCA 72 bp ACTACAACCCACCATGGCATACCACATTCTACTCATTaGAGGTTCACTGTAACCAATCTCACTGTATCCTCA +
Preference number: 3 (lower is better)
Translates to: TTTHHGIPHSTH*RFTVTNLTVSS
Trigger: TGAGGATACAGTGAGATTGGTTACAGTGAACCTTCAATGAGTAGAATGTGGTATGCCATGGTGGGTTGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR TCA 72 bp AGGCATTCCAGAACAAGGCATTGTTATCATAGGAGATaGCAGGTCCATGCATGTTATTGTCCCAGAAGACTT +
Preference number: 3 (lower is better)
Translates to: RHSRTRHCYHRR*QVHACYCPRRL
Trigger: AAGTCTTCTGGGACAATAACATGCATGGACCTGTCATCTCCTATGATAACAATGCCTTGTTCTGGAATGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681109.1
3UTR CCA 72 bp CTTGTGTTGGATCTAAAGGCGAGTAGTCAAATATTCTaGGAAGGTTTCCTACATACGCTCTCTGGAATTCTG +
Preference number: 3 (lower is better)
Translates to: LVLDLKASSQIF*EGFLHTLSGIL
Trigger: CAGAATTCCAGAGAGCGTATGTAGGAAACCTTCCCAGAATATTTGACTACTCGCCTTTAGATCCAACACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000680651.1
ENST00000681649.1
3UTR-3UTR CAA 90 bp ATCACCTGTTCAATGAGTTCAGATTTCACCGGAGGCTTTGAATACTGGCCTGAGTTAGTCATCTGTGTGTaGAAATCTTGTGTTGGATCT +
Preference number: 3 (lower is better)
Translates to: ITCSMSSDFTGGFEYWPELVICV*KSCVGS
Trigger: AGATCCAACACAAGATTTCAACACACAGATGACTAA...CTCAGGCCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680031.1
ENST00000680436.1
ENST00000681051.1
3UTR TCA 72 bp CAGAGATGGGAAAATCACAGACAAATTTGGGGCACTTaGCATGACTCCAAAGAGTTATCATGTGAGATGGTA +
Preference number: 3 (lower is better)
Translates to: QRWENHRQIWGT*HDSKELSCEMV
Trigger: TACCATCTCACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTTCCCATCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR TCA 72 bp ACTGTAACCAATCTCACTGTATCCTCAAAGCATGATTaGAAGAGAGGGCAGGTGTCATCATACCATTGTTCA +
Preference number: 3 (lower is better)
Translates to: TVTNLTVSSKHD*KRGQVSSYHCS
Trigger: TGAACAATGGTATGATGACACCTGCCCTCTCTTTCAATCATGCTTTGAGGATACAGTGAGATTGGTTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR GCA 72 bp TCTAGGTCCTTCGGGCTTGGCCTCAGAAATAATGTTTaGATTGGCATTATTCTCCATCTCAATCACAAAATC +
Preference number: 3 (lower is better)
Translates to: SRSFGLGLRNNV*IGIILHLNHKI
Trigger: GATTTTGTGATTGAGATGGAGAATAATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680905.1
ENST00000681098.1
ENST00000681362.1
3UTR CCA 72 bp CATCTAAAATCCTTAGTGTGTCCAAGATCACACTGTTaGTCACATCAGACAAGCAATGAAGGCAAGTCAGAA +
Preference number: 3 (lower is better)
Translates to: HLKSLVCPRSHC*SHQTSNEGKSE
Trigger: TTCTGACTTGCCTTCATTGCTTGTCTGATGTGACCAACAGTGTGATCTTGGACACACTAAGGATTTTAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR CCA 72 bp CTTCCAACCACATCTCTATTTTTACAAACGGAGAAATaGAGGTCCAGAAGTAACTCTCGTTTCCAAAGACCA +
Preference number: 3 (lower is better)
Translates to: LPTTSLFLQTEK*RSRSNSRFQRP
Trigger: TGGTCTTTGGAAACGAGAGTTACTTCTGGACCTCCATTTCTCCGTTTGTAAAAATAGAGATGTGGTTGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681299.1
3UTR-3UTR CAA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTATGTAGAAATAGCCCTTaGTGTTGTGGGGCAGAAGAA +
Preference number: 3 (lower is better)
Translates to: VVDNFVSTYLGITALAKLCRNSP*CCGAEE
Trigger: TTCTTCTGCCCCACAACACAAAGGGCTATTTCTACA...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR GCA 72 bp TTGTTCACAACTCACTACATCCTAACCCAATGTCTGTaGTTTGTTTCACCTGGTTGGTTCTGTTTATTTTCC +
Preference number: 3 (lower is better)
Translates to: LFTTHYILTQCL*FVSPGWFCLFS
Trigger: GGAAAATAAACAGAACCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR-3UTR CAA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTAACCACATTCTACTCATaGAAGGTTCACTGTAACCAA +
Preference number: 3 (lower is better)
Translates to: VVDNFVSTYLGITALAKLTTFYS*KVHCNQ
Trigger: TTGGTTACAGTGAACCTTCAATGAGTAGAATGTGGT...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR CCA 72 bp TATGAAGCATATCAATTCCAAAATGCGCTAAGTGCTTaGCCAAATGAGGATCCAAAACAGGTTCTTCTTCTT +
Preference number: 3 (lower is better)
Translates to: YEAYQFQNALSA*PNEDPKQVLLL
Trigger: AAGAAGAAGAACCTGTTTTGGATCCTCATTTGGCCAAGCACTTAGCGCATTTTGGAATTGATATGCTTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000680055.1
ENST00000680276.1
ENST00000681109.1
CDS-3UTR CCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCACCCTGTCGCCGGACCTaGGCACGCGGATCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPPCRRT*ARGSWA
Trigger: TGCCCACGATCCGCGTGCCCAGGTCCGGCGACAGGG...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp AGTGGACTGGACCTAGATGGGGCAGGGAGGTGCCGCGTGCCCTGGTCTGCATGGAGGTGCCGCGTGCCCTaGTCTGCATGGAAGGCACTT +
Preference number: 4 (lower is better)
Translates to: SGLDLDGAGRCRVPWSAWRCRVP*SAWKAL
Trigger: AAGTGCCTTCCATGCAGACCAGGGCACGCGGCACCT...CCATGCAGACCAGGGCACGCGGCACCTCCCTGCCCCATCTAGGTCCAGTCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS-3UTR CCA 90 bp TGGGTAGCCCATGTCTCTGTAATGCTCCAGCGCATGCCCGTTGCCCCCAGAGCTCGGATCGTGGGCATGTaGGGCACTAGCAGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: WVAHVSVMLQRMPVAPRARIVGM*GTSSSP
Trigger: CGGCGAGCTGCTAGTGCCCCACATGCCCACGATCCG...AGCTCTGGGGGCAACGGGCATGCGCTGGAGCATTACAGAGACATGGGCTACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679350.1
CDS-3UTR GCA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCTCTTCCTGCCTCCGCTaGCGCCCGGCATGCCGAACA +
Preference number: 4 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTSSCLR*RPACRT
Trigger: TGTTCGGCATGCCGGGCGGCAGCGGAGGCAGGAAGA...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCACTGCAGCCATCTTCCTaGCTCCGCTGCCGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPLQPSS*LRCRPA
Trigger: TGCCGGGCGGCAGCGGAGGCAGGAAGATGGCTGCAG...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCACTCGCCGATGTCTCCTaGAGCCATCTTCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPLADVS*SHLPAS
Trigger: GGAGGCAGGAAGATGGCTGCAGGAGACATCGGCGAG...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CCGCCTCCATGGCCACAGGTAACTGCATCAGGTAATCCACCCTCTCCGTGTAGCCGGATCGTGGGCATGTaGGGCACTAGCAGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: PPPWPQVTASGNPPSPCSRIVGM*GTSSSP
Trigger: CGGCGAGCTGCTAGTGCCCCACATGCCCACGATCCG...GCTACACGGAGAGGGTGGATTACCTGATGCAGTTACCTGTGGCCATGGAGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681051.1
CDS-3UTR CCA 90 bp GTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGGGGAGCAGCCCTGTCGCCGGACCTaGGCACGCGGATCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VQPSESPNRTLSSQAGEQPCRRT*ARGSWA
Trigger: TGCCCACGATCCGCGTGCCCAGGTCCGGCGACAGGG...CTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCATCTTCCTGCCTCCGCTaGCGCCCGGCATGCCGAACA +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPSSCLR*RPACRT
Trigger: TGTTCGGCATGCCGGGCGGCAGCGGAGGCAGGAAGA...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp TGTTGGTTGCCGCCTCCATGGCCACAGGTAACTGCATCAGGTAATCCACCCTCTCTGCAGCCATCTTCCTaGCTCCGCTGCCGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: CWLPPPWPQVTASGNPPSLQPSS*LRCRPA
Trigger: TGCCGGGCGGCAGCGGAGGCAGGAAGATGGCTGCAG...AGAGGGTGGATTACCTGATGCAGTTACCTGTGGCCATGGAGGCGGCAACCAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681051.1
CDS-3UTR GCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCAAACCCGGGAGGAGGCTaGAGTGAGCTGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPNPGGG*SELRLH
Trigger: GTGCAATCTCAGCTCACTGCAGCCTCCTCCCGGGTT...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTCTCGCAGGTCGCATCTaGCACACTTCCAACCACTTG +
Preference number: 4 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPLAGRI*HTSNHL
Trigger: CAAGTGGTTGGAAGTGTGCCAGATGCGACCTGCGAG...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCCTGCCCCGTCAGGAGTaGTGGTTCCCAGTTTCACGG +
Preference number: 4 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSLPRQE*WFPVSR
Trigger: CCGTGAAACTGGGAACCATCACTCCTGACGGGGCAG...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTCGCCCATATTTCCAGTaGAGTACACAGCCTTGCGAC +
Preference number: 4 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPRPYFQ*STQPCD
Trigger: GTCGCAAGGCTGTGTACTTCACTGGAAATATGGGCG...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCACCAAAGGATCACCTATaGGACAGGGACCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPPKDHL*DRDPHH
Trigger: GTGATGGGGGTCCCTGTCTCATAGGTGATCCTTTGG...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTAAAAGTACTGCACCGTaGGCTCCCTCCTTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPKSTAP*APSFCQ
Trigger: TTGGCAGAAGGAGGGAGCTCACGGTGCAGTACTTTT...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCGGCAGGAGAATCACTTaGACCCGGGAGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSGRRIT*TREEAA
Trigger: TGCAGCCTCCTCCCGGGTTCAAGTGATTCTCCTGCC...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCAGAGGCTGAGGCAGGTTaGGGTCAAGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPEAEAG*GQEFKT
Trigger: GGTCTTGAACTCTTGACCTCAACCTGCCTCAGCCTC...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGCCCTGTCGCCGGACCTaGGCACGCGGATCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQPCRRT*ARGSWA
Trigger: TGCCCACGATCCGCGTGCCCAGGTCCGGCGACAGGG...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTGAGGAGAATTCCGGGTaGCTCTTGCTTACAAAGGCC +
Preference number: 4 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPEENSG*LLLTKA
Trigger: GGCCTTTGTAAGCAAGAGCCACCCGGAATTCTCCTC...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTTGTCTCTCGGTCACATaGCACCAAAGGATCACCCCA +
Preference number: 4 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPCLSVT*HQRITP
Trigger: TGGGGTGATCCTTTGGTGCCATGTGACCGAGAGACA...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680734.1
ENST00000681736.1
ENST00000681918.1
CDS-3UTR TCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCAGGAGAATCACTTaGACCCGGGAGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPGRRIT*TREEAA
Trigger: TGCAGCCTCCTCCCGGGTTCAAGTGATTCTCCTGCC...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp TCGCAGGTCGCATCTGGCACACTTCCAACCACTTGGAGGAATCCTGACTCCATTTCTTCCTGCCTCCGCTaGCGCCCGGCATGCCGAACA +
Preference number: 4 (lower is better)
Translates to: SQVASGTLPTTWRNPDSISSCLR*RPACRT
Trigger: TGTTCGGCATGCCGGGCGGCAGCGGAGGCAGGAAGA...AATGGAGTCAGGATTCCTCCAAGTGGTTGGAAGTGTGCCAGATGCGACCTGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679350.1
CDS-3UTR CCA 90 bp GTCAAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATTCAACCAGAGCCCTGTCGCCGGACCTaGGCACGCGGATCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VKEPLSTQDRAVSQIQPEPCRRT*ARGSWA
Trigger: TGCCCACGATCCGCGTGCCCAGGTCCGGCGACAGGG...CTCTGGTTGAATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679350.1
CDS-3UTR CCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCAGAGGAGAATTCCGGGTaGCTCTTGCTTACAAAGGCC +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPEENSG*LLLTKA
Trigger: GGCCTTTGTAAGCAAGAGCCACCCGGAATTCTCCTC...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp GCCCATGTCTCTGTAATGCTCCAGCGCATGCCCGTTGCCCCCAGAGCTGTCAAACACTTGGAGGAATCCTaGCTCCATTGTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AHVSVMLQRMPVAPRAVKHLEES*LHCPAG
Trigger: CCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTG...TTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGAGCATTACAGAGACATGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679350.1
ENST00000681128.1
CDS-3UTR TCA 90 bp CACACAGGACAGAGCCGTCAGTCAGATTCAACCAGAGGTTTTCTCGCAGGTCGCCTGCCCCGTCAGGAGTaGTGGTTCCCAGTTTCACGG +
Preference number: 4 (lower is better)
Translates to: HTGQSRQSDSTRGFLAGRLPRQE*WFPVSR
Trigger: CCGTGAAACTGGGAACCATCACTCCTGACGGGGCAG...GCGACCTGCGAGAAAACCTCTGGTTGAATCTGACTGACGGCTCTGTCCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR TCA 90 bp GGCTCCAGCAGAAGCTGCCCCTCCATAACCAGGCATGGTCAGCGGCTCAGCAAACGCCCATATTTCCAGTaGAGTACACAGCCTTGCGAC +
Preference number: 4 (lower is better)
Translates to: GSSRSCPSITRHGQRLSKRPYFQ*STQPCD
Trigger: GTCGCAAGGCTGTGTACTTCACTGGAAATATGGGCG...TTTGCTGAGCCGCTGACCATGCCTGGTTATGGAGGGGCAGCTTCTGCTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR TCA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTGTTAACATTAGGAGGTaGCACCAGTGGGCACACTTT +
Preference number: 4 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPVNIRR*HQWAHF
Trigger: AAAGTGTGCCCACTGGTGTCACCTCCTAATGTTAAC...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTCCCACTTGTTTCAAATaGAAAGGCCCAGAGAGGTAC +
Preference number: 4 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPPTCFK*KGPERY
Trigger: GTACCTCTCTGGGCCTTTTCATTTGAAACAAGTGGG...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGCACTTTGGGAGGCTaGGGCAGGTTGAGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSSTLGG*GRLRSR
Trigger: TCTTGACCTCAACCTGCCTCAGCCTCCCAAAGTGCT...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp TTCAGTTTCGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTTGCCAGCGCATGCCCGTTaGCCCCAGAGCTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: FSFVPDSWITSHSLTLSLPAHAR*PQSCQR
Trigger: TCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGG...CAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAAACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680055.1
ENST00000680651.1
CDS-3UTR GCA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCTTCATCCTTGTTGGTTaGCGCCTCCATGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTFILVG*RLHGHR
Trigger: CCTGTGGCCATGGAGGCGGCAACCAACAAGGATGAA...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCCCCATCTCGGCCAGCTaGATCACTGATGACTCATCG +
Preference number: 4 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSPISAS*ITDDSS
Trigger: CGATGAGTCATCAGTGATGCAGCTGGCCGAGATGGG...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCCCCATCTCGGCCAGCTaGATCACTGATGACTCATCG +
Preference number: 4 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSPISAS*ITDDSS
Trigger: CGATGAGTCATCAGTGATGCAGCTGGCCGAGATGGG...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCACAGCCTTGCGACATaGTTCCAGCGGGAAACCCAT +
Preference number: 4 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTHSLAT*FQRETH
Trigger: ATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGTG...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp GAAGTACACAGCCTTGCGACATGCTTCCAGCGGGAAACCCATCTCGGCCAGCTGCACAGCCTTGCGACATaGTTCCAGCGGGAAACCCAT +
Preference number: 4 (lower is better)
Translates to: EVHSLATCFQRETHLGQLHSLAT*FQRETH
Trigger: ATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGTG...CAGCTGGCCGAGATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGTGTACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR GCA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTGAGTGGCAGGATTTGTaGAGTGTTTCAACACACCCA +
Preference number: 4 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPEWQDL*SVSTHP
Trigger: TGGGTGTGTTGAAACACTGCACAAATCCTGCCACTC...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CACTTCCAACCACTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGTGGGCACGCGGATCGTaGGCATGTGGGGCACTAGCA +
Preference number: 4 (lower is better)
Translates to: HFQPLGGILTPLSSWVRLWARGS*ACGALA
Trigger: TGCTAGTGCCCCACATGCCCACGATCCGCGTGCCCA...CAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTGGTTGGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497380.1
ENST00000679350.1
CDS-3UTR CCA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCTTCGTGCCCGACTCCTaGATCACTTCCCACTCACTG +
Preference number: 4 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSFVPDS*ITSHSL
Trigger: CAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAA...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCTTCGTGCCCGACTCCTaGATCACTTCCCACTCACTG +
Preference number: 4 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSFVPDS*ITSHSL
Trigger: CAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAA...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTCCTACATACGCTCTCTaGAATTCTGGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPPTYAL*NSGMLK
Trigger: CTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGG...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCTGGTTGCCGCCTCCATaGCCACAGGTAACTGCATCA +
Preference number: 4 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSWLPPP*PQVTAS
Trigger: TGATGCAGTTACCTGTGGCCATGGAGGCGGCAACCA...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCCAGGTCTCCAGGCCATaGGCCTTAGACACCATGTCT +
Preference number: 4 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSQVSRP*ALDTMS
Trigger: AGACATGGTGTCTAAGGCCCATGGCCTGGAGACCTG...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263966.8
ENST00000680587.1
ENST00000680734.1
ENST00000681736.1
ENST00000681918.1
3UTR CAA 72 bp ACCTCGGCGCCCATATTTCCAGTGAAGTACACAGCCTaGCGACATGCTTCCAGCGGGAAACCCATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: TSAPIFPVKYTA*RHASSGKPISA
Trigger: GGCCGAGATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGTGTACTTCACTGGAAATATGGGCGCCGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR TCA 90 bp TCCACACAGGACAGAGCCGTCAGTCAGATTCAACCAGAGGTTTTCTCGCAGGTCCTGCCCCGTCAGGAGTaGTGGTTCCCAGTTTCACGG +
Preference number: 4 (lower is better)
Translates to: STQDRAVSQIQPEVFSQVLPRQE*WFPVSR
Trigger: CCGTGAAACTGGGAACCATCACTCCTGACGGGGCAG...GACCTGCGAGAAAACCTCTGGTTGAATCTGACTGACGGCTCTGTCCTGTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR TCA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTAAGTGCTTGGCCAAATaGGGATCCAAAACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPKCLAK*GSKTGS
Trigger: AGAACCTGTTTTGGATCCTCATTTGGCCAAGCACTT...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp CTGCATCAGGTAATCCACCCTCTCCGTGTAGCGGACTTTCCGGGTCTGACAGCAATCGCTTGGGTTTTCTaGGCCGATGCGGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LHQVIHPLRVADFPGLTAIAWVF*ADAVPL
Trigger: GAGAGGAACCGCATCGGCTCAGAAAACCCAAGCGAT...TGCTGTCAGACCCGGAAAGTCCGCTACACGGAGAGGGTGGATTACCTGATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR TCA 90 bp GAAGTACACAGCCTTGCGACATGCTTCCAGCGGGAAACCCATCTCGGCCAGCTGCGCCCATATTTCCAGTaGAGTACACAGCCTTGCGAC +
Preference number: 4 (lower is better)
Translates to: EVHSLATCFQRETHLGQLRPYFQ*STQPCD
Trigger: GTCGCAAGGCTGTGTACTTCACTGGAAATATGGGCG...CAGCTGGCCGAGATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGTGTACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR TCA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTTGTATCCTCAAAGCATaGTTGAAAGAGAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPCILKA*LKERAG
Trigger: ACCTGCCCTCTCTTTCAATCATGCTTTGAGGATACA...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp CCCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATGCCGTGCACACTCACTaGCCAGGGCTGGTAACTCCT +
Preference number: 4 (lower is better)
Translates to: PQSCQRTTFHTGQSRQSDAVHTH*PGLVTP
Trigger: AGGAGTTACCAGCCCTGGTCAGTGAGTGTGCACGGC...ATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681128.1
CDS-3UTR GCA 90 bp TCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCACCCATCTTCCTGCCTCCGCTaGCGCCCGGCATGCCGAACA +
Preference number: 4 (lower is better)
Translates to: SLQIPLKPLPHTWSWKHPSSCLR*RPACRT
Trigger: TGTTCGGCATGCCGGGCGGCAGCGGAGGCAGGAAGA...TGGGTGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp AAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATTCAACCAGAGGTTCTGCAGCCATCTTCCTaGCTCCGCTGCCGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: KEPLSTQDRAVSQIQPEVLQPSS*LRCRPA
Trigger: TGCCGGGCGGCAGCGGAGGCAGGAAGATGGCTGCAG...AACCTCTGGTTGAATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679350.1
CDS-3UTR GCA 90 bp GCTTACAAAGGCCTTAAACATGCGCGGAGAGATCCCGTTCTGCTGTGGCTTGTGCTCGCCGATGTCTCCTaGAGCCATCTTCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: AYKGLKHARRDPVLLWLVLADVS*SHLPAS
Trigger: GGAGGCAGGAAGATGGCTGCAGGAGACATCGGCGAG...CACAAGCCACAGCAGAACGGGATCTCTCCGCGCATGTTTAAGGCCTTTGTAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681051.1
CDS-3UTR GCA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTCACGTGTCTGGGTCCTaGTTTCTGTATGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPHVSGS*FLYGDF
Trigger: AAAATCTCCATACAGAAAGCAGGACCCAGACACGTG...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp CCCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATCCAGCGCATGCCCGTTaGCCCCAGAGCTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: PQSCQRTTFHTGQSRQSDPAHAR*PQSCQR
Trigger: TCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGG...ATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR GCA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTACTAGATTCACCAGGTaGAAGAAGAATTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPTRFTR*KKNSWA
Trigger: TGCCCAGGAATTCTTCTTGCACCTGGTGAATCTAGT...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp GCAAAATGTCCTGAAGCAATAAAGATGGGCTTCGCAGCGCACACTGAGTGGACTCAGGGAGGTGCCGCGTaGCCTGGTCTGCATGGAAGG +
Preference number: 4 (lower is better)
Translates to: AKCPEAIKMGFAAHTEWTQGGAA*PGLHGR
Trigger: CCTTCCATGCAGACCAGGGCACGCGGCACCTCCCTG...AGTCCACTCAGTGTGCGCTGCGAAGCCCATCTTTATTGCTTCAGGACATTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS-3UTR GCA 90 bp GCCCGTTGCCCCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACAGAGCCGTCTATCCGCCAACACCTaGCTCTGTAAACACACCAGC +
Preference number: 4 (lower is better)
Translates to: ARCPQSCQRTTFHTGQSRLSANT*LCKHTS
Trigger: GCTGGTGTGTTTACAGAGGCAGGTGTTGGCGGATAG...ACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAACGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681299.1
CDS-3UTR CCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATTGATGTCATTGTCCTaGAGCCCATTCTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPLMSLS*SPFSVP
Trigger: TGGGACAGAGAATGGGCTCCAGGACAATGACATCAA...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CAGATGAGGACAGTGAGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTGGTTGCCGCCTCCATaGCCACAGGTAACTGCATCA +
Preference number: 4 (lower is better)
Translates to: QMRTVRHRTDEGLAQGPQWLPPP*PQVTAS
Trigger: TGATGCAGTTACCTGTGGCCATGGAGGCGGCAACCA...CTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCTCACTGTCCTCATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CACCCTCTCCGTGTAGCGGACTTTCCGGGTCTGACAGCACTGAATGCGTTCTTCTGGTTGCCGCCTCCATaGCCACAGGTAACTGCATCA +
Preference number: 4 (lower is better)
Translates to: HPLRVADFPGLTALNAFFWLPPP*PQVTAS
Trigger: TGATGCAGTTACCTGTGGCCATGGAGGCGGCAACCA...GAAGAACGCATTCAGTGCTGTCAGACCCGGAAAGTCCGCTACACGGAGAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR CCA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCTCAGTTCATCCTTGTTaGTTGCCGCCTCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTSVHPC*LPPPWP
Trigger: TGGCCATGGAGGCGGCAACCAACAAGGATGAACTGA...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTATTTCCTCTGGAGGTTaGTTATCCAGTCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPISSGG*LSSPEA
Trigger: TGCTTCTGGACTGGATAACCAACCTCCAGAGGAAAT...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCTCGAGCTATCCCCGCTaGACTTCCTATAGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSSSYPR*TSYSPK
Trigger: CTTTGGGCTATAGGAAGTCCAGCGGGGATAGCTCGA...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAAACCTGCTGGACAGGTaGGCACAGGAACAGACTCAG +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPNLLDR*AQEQTQ
Trigger: CTGAGTCTGTTCCTGTGCCCACCTGTCCAGCAGGTT...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CGCAGGTCGCATCTGGCACACTTCCAACCACTGGAAAGCCATTGGAGAGTAGTCCTCGCAGGTCGCATCTaGCACACTTCCAACCACTGG +
Preference number: 4 (lower is better)
Translates to: RRSHLAHFQPLESHWRVVLAGRI*HTSNHW
Trigger: CCAGTGGTTGGAAGTGTGCCAGATGCGACCTGCGAG...GACTACTCTCCAATGGCTTTCCAGTGGTTGGAAGTGTGCCAGATGCGACCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680276.1
CDS-3UTR TCA 90 bp GTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGGGGAGCAGCACTTGGAGGAATCCTaGCTCCATTGTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VQPSESPNRTLSSQAGEQHLEES*LHCPAG
Trigger: CCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTG...CTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR TCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATCATCACCTGTTCAATaGGTTCAGATTTCACCGGAG +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPSSPVQ*VQISPE
Trigger: CTCCGGTGAAATCTGAACTCATTGAACAGGTGATGA...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCTGGCTCGGAGATGGTTaGTATCAAGTAGGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSWLGDG*YQVGLA
Trigger: TGCCAGACCTACTTGATATCAACCATCTCCGAGCCA...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTCATCAGGCGATCTTTTaGGTCATCAGGAATGACTAT +
Preference number: 4 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPHQAIF*VIRNDY
Trigger: ATAGTCATTCCTGATGACTCAAAAGATCGCCTGATG...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATCTGGCTCTTCCATGTaGACAATGATCCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPSGSSM*TMIQLK
Trigger: CTTCAACTGGATCATTGTTCACATGGAAGAGCCAGA...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCAGTGGATGTTCCCATGTaGCTGATGAATGCAAATAGC +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPVDVPM*LMNANS
Trigger: GCTATTTGCATTCATCAGTCACATGGGAACATCCAC...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCCCATTTTTGATGTGCTaGTGGCAGATCCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSPFLMC*WQILHQ
Trigger: CTGGTGGAGGATCTGCCATCAGCACATCAAAAATGG...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp TGTGGCTTGTGCTCCTCCTTCATCACCTGTTCAATGAGTTCAGATTTCACCGGATCTTCCTGCCTCCGCTaGCGCCCGGCATGCCGAACA +
Preference number: 4 (lower is better)
Translates to: CGLCSSFITCSMSSDFTGSSCLR*RPACRT
Trigger: TGTTCGGCATGCCGGGCGGCAGCGGAGGCAGGAAGA...TCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGAGGAGCACAAGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681051.1
CDS-3UTR GCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGCCAGCGCATGCCCGTTaGCCCCAGAGCTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQPAHAR*PQSCQR
Trigger: TCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGG...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCTTCTGCTGTGGCTTGTaGTCCTCCTTCATCACCTGT +
Preference number: 4 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSFCCGL*SSFITC
Trigger: ACAGGTGATGAAGGAGGAGCACAAGCCACAGCAGAA...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp GTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGGGGAGCAGTTCATCCTTGTTGGTTaGCGCCTCCATGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: VQPSESPNRTLSSQAGEQFILVG*RLHGHR
Trigger: CCTGTGGCCATGGAGGCGGCAACCAACAAGGATGAA...CTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp CAGTTGAAGGCCACCTCGGCGCCCATATTTCCAGTGAAGTACACAGCCTTGCGACCCATCTCGGCCAGCTaGATCACTGATGACTCATCG +
Preference number: 4 (lower is better)
Translates to: QLKATSAPIFPVKYTALRPISAS*ITDDSS
Trigger: CGATGAGTCATCAGTGATGCAGCTGGCCGAGATGGG...TCGCAAGGCTGTGTACTTCACTGGAAATATGGGCGCCGAGGTGGCCTTCAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR CCA 90 bp GGGTCCTGCTTTCTGTATGGAGATTTTGAGCTGAGAACTGCATCACAAGCAATTCCCTGTCGCCGGACCTaGGCACGCGGATCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GSCFLYGDFELRTASQAIPCRRT*ARGSWA
Trigger: TGCCCACGATCCGCGTGCCCAGGTCCGGCGACAGGG...AATTGCTTGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGAAAGCAGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497380.1
ENST00000679350.1
CDS-3UTR CCA 90 bp TTCATCACCTGTTCAATGAGTTCAGATTTCACCGGAGGCTTTGAATACTGGCCTCCCTGTCGCCGGACCTaGGCACGCGGATCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: FITCSMSSDFTGGFEYWPPCRRT*ARGSWA
Trigger: TGCCCACGATCCGCGTGCCCAGGTCCGGCGACAGGG...AGGCCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681051.1
CDS-3UTR CCA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCGTCCACCTTCAGAATTaGGAGAGTCGTAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTVHLQN*ESRRRR
Trigger: CCTTCTCCTACGACTCTCCCAATTCTGAAGGTGGAC...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp TTGCCCCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCCTCGCAGGTCGCATCTaGCACACTTCCAACCACTTG +
Preference number: 4 (lower is better)
Translates to: LPPELSKNHFPHRTEPSVLAGRI*HTSNHL
Trigger: CAAGTGGTTGGAAGTGTGCCAGATGCGACCTGCGAG...GACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679350.1
ENST00000681128.1
CDS-3UTR CCA 90 bp CGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTTGATGTCATTTTCGTGCCCGACTCCTaGATCACTTCCCACTCACTG +
Preference number: 4 (lower is better)
Translates to: RARLLDHFPLTDPQLDVIFVPDS*ITSHSL
Trigger: CAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAA...AATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679783.1
ENST00000680055.1
CDS-3UTR CCA 90 bp CTGCATCAGGTAATCCACCCTCTCCGTGTAGCGGACTTTCCGGGTCTGACAGCAGAGGAGAATTCCGGGTaGCTCTTGCTTACAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LHQVIHPLRVADFPGLTAEENSG*LLLTKA
Trigger: GGCCTTTGTAAGCAAGAGCCACCCGGAATTCTCCTC...TGCTGTCAGACCCGGAAAGTCCGCTACACGGAGAGGGTGGATTACCTGATGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR CCA 90 bp TGTTGGTTGCCGCCTCCATGGCCACAGGTAACTGCATCAGGTAATCCACCCTCTTGGTTGCCGCCTCCATaGCCACAGGTAACTGCATCA +
Preference number: 4 (lower is better)
Translates to: CWLPPPWPQVTASGNPPSWLPPP*PQVTAS
Trigger: TGATGCAGTTACCTGTGGCCATGGAGGCGGCAACCA...AGAGGGTGGATTACCTGATGCAGTTACCTGTGGCCATGGAGGCGGCAACCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR CCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCATCAGTTCATCCTTGTTaGTTGCCGCCTCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPSVHPC*LPPPWP
Trigger: TGGCCATGGAGGCGGCAACCAACAAGGATGAACTGA...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCCCCTGGCTCGGAGATaGTTGATATCAAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTPLARR*LISSRS
Trigger: AGACCTACTTGATATCAACCATCTCCGAGCCAGGGG...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCAACTGGCCACATTATTTaGTTTCTCCAGAGGCCACTA +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPTGHII*FLQRPL
Trigger: TAGTGGCCTCTGGAGAAACCAAATAATGTGGCCAGT...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCGCGGCACATCAAGAGTaGCAGGATTTGTGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSAAHQE*QDLCSV
Trigger: AACACTGCACAAATCCTGCCACTCTTGATGTGCCGC...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCAACATCAAAACCTGCTaGACAGGTGGGCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTNIKTC*TGGHRN
Trigger: GTTCCTGTGCCCACCTGTCCAGCAGGTTTTGATGTT...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCATGTCTCTCGGTCACATaGCACCAAAGGATCACCCCA +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPCLSVT*HQRITP
Trigger: TGGGGTGATCCTTTGGTGCCATGTGACCGAGAGACA...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680734.1
ENST00000681736.1
ENST00000681918.1
CDS-3UTR CCA 90 bp GGAAGGTTTCCTACATACCCAGTCTCTGTAGAAGGCAGGCCAGAGAAAAGGTGGGCAGCGCACACTGAGTaGACTGGACCTAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: GRFPTYPVSVEGRPEKRWAAHTE*TGPRWG
Trigger: GCCCCATCTAGGTCCAGTCCACTCAGTGTGCGCTGC...CCACCTTTTCTCTGGCCTGCCTTCTACAGAGACTGGGTATGTAGGAAACCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS-3UTR TCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATCTGTATGGAGATTTTaGGCTGAGAACTGCATCACA +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPSVWRF*AENCIT
Trigger: TGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGA...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp ACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTCCCCTGCCCCGTCAGGAGTaGTGGTTCCCAGTTTCACGG +
Preference number: 4 (lower is better)
Translates to: TWSWKHPVNERLSRSSFPLPRQE*WFPVSR
Trigger: CCGTGAAACTGGGAACCATCACTCCTGACGGGGCAG...GGGAAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR TCA 90 bp CAAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATTCAACCAGAGGTCTGCCCCGTCAGGAGTaGTGGTTCCCAGTTTCACGG +
Preference number: 4 (lower is better)
Translates to: QRTTFHTGQSRQSDSTRGLPRQE*WFPVSR
Trigger: CCGTGAAACTGGGAACCATCACTCCTGACGGGGCAG...ACCTCTGGTTGAATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR TCA 90 bp CAGCCTCGGGCAGGTCCTTCAGAAGGCATTCCAGAACAAGGCATTGTTATCATACTGCCCCGTCAGGAGTaGTGGTTCCCAGTTTCACGG +
Preference number: 4 (lower is better)
Translates to: QPRAGPSEGIPEQGIVIILPRQE*WFPVSR
Trigger: CCGTGAAACTGGGAACCATCACTCCTGACGGGGCAG...TATGATAACAATGCCTTGTTCTGGAATGCCTTCTGAAGGACCTGCCCGAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681109.1
CDS-3UTR TCA 90 bp TCAGTCAGATTCAACCAGAGGTTTTCTCGCAGGTCGCATCTGGCACACTTCCAACTGCCCCGTCAGGAGTaGTGGTTCCCAGTTTCACGG +
Preference number: 4 (lower is better)
Translates to: SVRFNQRFSRRSHLAHFQLPRQE*WFPVSR
Trigger: CCGTGAAACTGGGAACCATCACTCCTGACGGGGCAG...TTGGAAGTGTGCCAGATGCGACCTGCGAGAAAACCTCTGGTTGAATCTGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR TCA 90 bp CTGATGTCTGGAAGTTCTTCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATGGTGGCTCGGAGATGGTTaGTATCAAGTAGGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LMSGSSSSPGCNPLARRWWLGDG*YQVGLA
Trigger: TGCCAGACCTACTTGATATCAACCATCTCCGAGCCA...CCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGAAGAACTTCCAGACATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679954.1
ENST00000680167.1
CDS-3UTR TCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCATGGCTCGGAGATGGTTaGTATCAAGTAGGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPWLGDG*YQVGLA
Trigger: TGCCAGACCTACTTGATATCAACCATCTCCGAGCCA...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTCCACATTCTACTCATTaGAGGTTCACTGTAACCAAT +
Preference number: 4 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPPHSTH*RFTVTN
Trigger: ATTGGTTACAGTGAACCTTCAATGAGTAGAATGTGG...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGTGATGCCTACAAGATaGCAAGGACGGCCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPVMPTR*QGRPFC
Trigger: ACAGAAAGGCCGTCCTTGTCATCTTGTAGGCATCAC...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp CTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTCCTGCAGCCATCTTCCTaGCTCCGCTGCCGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: LESFDEVSSTILFLSKSLLQPSS*LRCRPA
Trigger: TGCCGGGCGGCAGCGGAGGCAGGAAGATGGCTGCAG...GAGGGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp CAAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATTCAACCAGAGGTCTCGCCGATGTCTCCTaGAGCCATCTTCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: QRTTFHTGQSRQSDSTRGLADVS*SHLPAS
Trigger: GGAGGCAGGAAGATGGCTGCAGGAGACATCGGCGAG...ACCTCTGGTTGAATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679350.1
CDS-3UTR GCA 90 bp TCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCACCCACCAGCGCATGCCCGTTaGCCCCAGAGCTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SLQIPLKPLPHTWSWKHPPAHAR*PQSCQR
Trigger: TCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGG...TGGGTGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp GGCCTTAAACATGCGCGGAGAGATCCCGTTCTGCTGTGGCTTGTGCTCCTCCTTTTCTGCTGTGGCTTGTaGTCCTCCTTCATCACCTGT +
Preference number: 4 (lower is better)
Translates to: GLKHARRDPVLLWLVLLLFCCGL*SSFITC
Trigger: ACAGGTGATGAAGGAGGAGCACAAGCCACAGCAGAA...AAGGAGGAGCACAAGCCACAGCAGAACGGGATCTCTCCGCGCATGTTTAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR GCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCAACAATGAAACAAATATaGCCAACACCCTCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPTMKQI*PTPSSG
Trigger: GCCACTTGAGGGTGTTGGGCATATTTGTTTCATTGT...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCGAGTGGCAGGATTTGTaGAGTGTTTCAACACACCCA +
Preference number: 4 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSEWQDL*SVSTHP
Trigger: TGGGTGTGTTGAAACACTGCACAAATCCTGCCACTC...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp AAATGTCCTGAAGCAATAAAGATGGGCTTCGCAGCGCACACTGAGTGGACTGGACCGCGTGCCCTGGTCTaGATGGAAGGCACTTACGCT +
Preference number: 4 (lower is better)
Translates to: KCPEAIKMGFAAHTEWTGPRALV*MEGTYA
Trigger: AGCGTAAGTGCCTTCCATGCAGACCAGGGCACGCGG...TCCAGTCCACTCAGTGTGCGCTGCGAAGCCCATCTTTATTGCTTCAGGACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS-3UTR GCA 90 bp AAGCAAAGCGAGATGTTTTCACACCCGCAGACTTTGCTTGTAGGGCACTGCTCCTTACCCCTTGTTGGTTaGCGCCTCCATGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: KQSEMFSHPQTLLVGHCSLPLVG*RLHGHR
Trigger: CCTGTGGCCATGGAGGCGGCAACCAACAAGGGGTAA...GGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGAAAACATCTCGCTTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681560.1
CDS-3UTR CCA 90 bp AGCCCATGTCTCTGTAATGCTCCAGCGCATGCCCGTTGCCCCCAGAGCTGTCAAATTTTCCCACGTGTCTaGGTCCTGCTTTCTGTATGG +
Preference number: 4 (lower is better)
Translates to: SPCLCNAPAHARCPQSCQIFPRV*VLLSVW
Trigger: CCATACAGAAAGCAGGACCCAGACACGTGGGAAAAT...TTGACAGCTCTGGGGGCAACGGGCATGCGCTGGAGCATTACAGAGACATGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CCA 90 bp TGCTCCAGCGCATGCCCGTTGCCCCCAGAGCTGTCAAAGAACCACTTTCCACACATTTTCCCACGTGTCTaGGTCCTGCTTTCTGTATGG +
Preference number: 4 (lower is better)
Translates to: CSSACPLPPELSKNHFPHIFPRV*VLLSVW
Trigger: CCATACAGAAAGCAGGACCCAGACACGTGGGAAAAT...GTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CCA 90 bp TCCAGCGCATGCCCGTTGCCCCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACTCCATTGTCCAGCTaGGTGAGGTTGTTGGCATAT +
Preference number: 4 (lower is better)
Translates to: SSACPLPPELSKNHFPHRTPLSS*VRLLAY
Trigger: ATATGCCAACAACCTCACCCAGCTGGACAATGGAGT...CCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CCA 90 bp CATCTGGCACACTTCCAACCACTTGGAGGAATCCTGACTCCATTGTCCAGCTGGCTCGCAGGTCGCATCTaGCACACTTCCAACCACTTG +
Preference number: 4 (lower is better)
Translates to: HLAHFQPLGGILTPLSSWLAGRI*HTSNHL
Trigger: CAAGTGGTTGGAAGTGTGCCAGATGCGACCTGCGAG...CCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTGGTTGGAAGTGTGCCAGATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679350.1
ENST00000681128.1
CDS-3UTR CCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCAAATGCGCTAAGTGCTTaGCCAAATGAGGATCCAAAA +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPNALSA*PNEDPK
Trigger: TTTTGGATCCTCATTTGGCCAAGCACTTAGCGCATT...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp TGGATCACTTCCCACTCACTGACCCTCAGCTTGATGTCATTGTCCTGGAGCCCATTCGTGCCCGACTCCTaGATCACTTCCCACTCACTG +
Preference number: 4 (lower is better)
Translates to: WITSHSLTLSLMSLSWSPFVPDS*ITSHSL
Trigger: CAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAA...TGGGCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679783.1
ENST00000680055.1
CDS-3UTR CCA 90 bp CAGGTTCTTCAGACCCGTGTAGCCAGGACCATACATTGGCTTCAGTTTCGTGCCTTCGTGCCCGACTCCTaGATCACTTCCCACTCACTG +
Preference number: 4 (lower is better)
Translates to: QVLQTRVARTIHWLQFRAFVPDS*ITSHSL
Trigger: CAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAA...GGCACGAAACTGAAGCCAATGTATGGTCCTGGCTACACGGGTCTGAAGAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000679783.1
ENST00000680055.1
ENST00000680307.1
ENST00000680651.1
ENST00000681649.1
CDS-3UTR CCA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCCCTACATACGCTCTCTaGAATTCTGGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSPTYAL*NSGMLK
Trigger: CTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGG...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp TGGCACGTACCAACTCAGGAAGGGGTCTTCTGTTTGCTTCTGCTTCCCTTCTCGTGGTTGCCGCCTCCATaGCCACAGGTAACTGCATCA +
Preference number: 4 (lower is better)
Translates to: WHVPTQEGVFCLLLLPFSWLPPP*PQVTAS
Trigger: TGATGCAGTTACCTGTGGCCATGGAGGCGGCAACCA...CGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTCCTGAGTTGGTACGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
CDS-3UTR CCA 90 bp CTGATGTCTGGAAGTTCTTCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATGGCCCCTGGCTCGGAGATaGTTGATATCAAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: LMSGSSSSPGCNPLARRWPLARR*LISSRS
Trigger: AGACCTACTTGATATCAACCATCTCCGAGCCAGGGG...CCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGAAGAACTTCCAGACATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679954.1
ENST00000680167.1
CDS-3UTR CCA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCTGTCTCTCGGTCACATaGCACCAAAGGATCACCTAT +
Preference number: 4 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSCLSVT*HQRITY
Trigger: ATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACA...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCGCCCAAAGTAAGCACTaGGAAATGTCAGGCACATTC +
Preference number: 4 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTAQSKH*EMSGTF
Trigger: GAATGTGCCTGACATTTCCCAGTGCTTACTTTGGGC...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCACATGTAAGTCTAGAGTaGGGCTGTCCAATAGAAGTA +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPHVSLE*GCPIEV
Trigger: TACTTCTATTGGACAGCCCCACTCTAGACTTACATG...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGCGGCACATCAAGAGTaGCAGGATTTGTGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPAAHQE*QDLCSV
Trigger: AACACTGCACAAATCCTGCCACTCTTGATGTGCCGC...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CAGAGGCTCCAGCAGAAGCTGCCCCTCCATAACCAGGCATGGTCAGCGGCTCAGGATGGGTCTATCAATTaGTTCATCAGGCGATTTCAC +
Preference number: 4 (lower is better)
Translates to: QRLQQKLPLHNQAWSAAQDGSIN*FIRRFH
Trigger: GTGAAATCGCCTGATGAACCAATTGATAGACCCATC...CTGAGCCGCTGACCATGCCTGGTTATGGAGGGGCAGCTTCTGCTGGAGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679893.1
3UTR CAA 72 bp GACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTaGATGTCATTGTCCTGGAGCCCATTCTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: DSWITSHSLTLS*MSLSWSPFSVP
Trigger: TGGGACAGAGAATGGGCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679783.1
ENST00000680055.1
CDS-3UTR TCA 90 bp CCACTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGTTGGCATATCACTTGGAGGAATCCTaGCTCCATTGTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PLGGILTPLSSWVRLLAYHLEES*LHCPAG
Trigger: CCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTG...ATATGCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497380.1
ENST00000679350.1
ENST00000681128.1
CDS-3UTR TCA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGCACTTGGAGGAATCCTaGCTCCATTGTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMHLEES*LHCPAG
Trigger: CCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTG...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp AAGGTTTCCTACATACGCTCTCTGGAATTCTGGGATGCTGAAGATGGCCTGCATCTGCCCCGTCAGGAGTaGTGGTTCCCAGTTTCACGG +
Preference number: 4 (lower is better)
Translates to: KVSYIRSLEFWDAEDGLHLPRQE*WFPVSR
Trigger: CCGTGAAACTGGGAACCATCACTCCTGACGGGGCAG...ATGCAGGCCATCTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGGAAACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680651.1
CDS-3UTR TCA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTTCTGTCCCATGCATATaGAGCATATCAATTCCAAAA +
Preference number: 4 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPSVPCI*SISIPK
Trigger: TTTTGGAATTGATATGCTTCATATGCATGGGACAGA...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCTCATCACCTGTTCAATaGGTTCAGATTTCACCGGAG +
Preference number: 4 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSSSPVQ*VQISPE
Trigger: CTCCGGTGAAATCTGAACTCATTGAACAGGTGATGA...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGATCGCTTGGGTTTTCTaGGCCGATGCGGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMIAWVF*ADAVPL
Trigger: GAGAGGAACCGCATCGGCTCAGAAAACCCAAGCGAT...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCTCACACCCAGAATCCTaGTTGTTCACAACTCACTAC +
Preference number: 4 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTSHPES*LFTTHY
Trigger: GTAGTGAGTTGTGAACAATCAGGATTCTGGGTGTGA...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCACCACATTCTACTCATTaGAGGTTCACTGTAACCAAT +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPPHSTH*RFTVTN
Trigger: ATTGGTTACAGTGAACCTTCAATGAGTAGAATGTGG...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTCATTTGTTCCCAAATTaGGGAAAACAGAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPHLFPN*GKQRRK
Trigger: TTTTCTCCTCTGTTTTCCTCAATTTGGGAACAAATG...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp CAGATGAGGACAGTGAGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGGTTAACATTAGGAGGTaGCACCAGTGGGCACACTTT +
Preference number: 4 (lower is better)
Translates to: QMRTVRHRTDEGLAQGPQVNIRR*HQWAHF
Trigger: AAAGTGTGCCCACTGGTGTCACCTCCTAATGTTAAC...CTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCTCACTGTCCTCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp CAGATGAGGACAGTGAGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGGTAACACTGTGCAGGTaGTCTCAGACACCAACTCAA +
Preference number: 4 (lower is better)
Translates to: QMRTVRHRTDEGLAQGPQVTLCR*SQTPTQ
Trigger: TTGAGTTGGTGTCTGAGATCACCTGCACAGTGTTAC...CTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCTCACTGTCCTCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp TACATTGGCTTCAGTTTCGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCATCTTGGAGGAATCCTaGCTCCATTGTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: YIGFSFVPDSWITSHSLTILEES*LHCPAG
Trigger: CCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGAT...GGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAAACTGAAGCCAATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679783.1
CDS-3UTR TCA 90 bp TGGTTCCCAGTTTCACGGCTAGTGGGTAGCCCATGTCTCTGTAATGCTCCAGCGAGACCACACAGAAGGTaGATGCCATGCAACTGTCAG +
Preference number: 4 (lower is better)
Translates to: WFPVSRLVGSPCLCNAPARPHRR*MPCNCQ
Trigger: CTGACAGTTGCATGGCATTCACCTTCTGTGTGGTCT...CGCTGGAGCATTACAGAGACATGGGCTACCCACTAGCCGTGAAACTGGGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681299.1
CDS-3UTR GCA 90 bp AACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATTCAACCAGAGGTTTTCTCCAGCGCATGCCCGTTaGCCCCAGAGCTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: NHFPHRTEPSVRFNQRFSPAHAR*PQSCQR
Trigger: TCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGG...AGAAAACCTCTGGTTGAATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR GCA 90 bp TTCAGTTTCGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTTGTTGGCTTCAGTTTCGTaGCCGACTCCTGGATCACTT +
Preference number: 4 (lower is better)
Translates to: FSFVPDSWITSHSLTLSLLASVS*PTPGSL
Trigger: AAGTGATCCAGGAGTCGGGCACGAAACTGAAGCCAA...CAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAAACTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679783.1
ENST00000680055.1
ENST00000680651.1
CDS-3UTR GCA 90 bp ATTGGCTTCAGTTTCGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCCTCTTGGCTTCAGTTTCGTaGCCGACTCCTGGATCACTT +
Preference number: 4 (lower is better)
Translates to: IGFSFVPDSWITSHSLTLLASVS*PTPGSL
Trigger: AAGTGATCCAGGAGTCGGGCACGAAACTGAAGCCAA...GAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAAACTGAAGCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679783.1
ENST00000680055.1
ENST00000680651.1
CDS-3UTR GCA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAATTCCTGGGCATCTTaGTGCCTGTTAGAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSNSWAS*CLLEEN
Trigger: ATTCTCCTCTAACAGGCAGCAAGATGCCCAGGAATT...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCCTAACCCAATGTCTGTaGTTTGTTTCACCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSLTQCL*FVSPGW
Trigger: CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAG...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp GTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGGGGAGCAGGTCTGGGTCTGCTTCTaGAGTCAGTCTGTTGCGATA +
Preference number: 4 (lower is better)
Translates to: VQPSESPNRTLSSQAGEQVWVCF*SQSVAI
Trigger: TATCGCAACAGACTGACTGCAGAAGCAGACCCAGAC...CTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp ATACATTGGCTTCAGTTTCGTGCCCGACTCCTGGATCACTTCCCACTCACTGACAGCCCATTCTCTGTCTaGCCCGTCAGGAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: IHWLQFRARLLDHFPLTDSPFSV*PVRSDG
Trigger: ACCATCACTCCTGACGGGGCAGACAGAGAATGGGCT...GTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAAACTGAAGCCAATGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680651.1
CDS-3UTR CCA 90 bp CATATATATGTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCACGGATCGTGGGCATGTaGGGCACTAGCAGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: HIYVQPSESPNRTLSSQARIVGM*GTSSSP
Trigger: CGGCGAGCTGCTAGTGCCCCACATGCCCACGATCCG...TGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATATATATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGCGGATCGTGGGCATGTaGGGCACTAGCAGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWRIVGM*GTSSSP
Trigger: CGGCGAGCTGCTAGTGCCCCACATGCCCACGATCCG...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp TGTTTCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCATGGGCACGCGGATCGTaGGCATGTGGGGCACTAGCA +
Preference number: 4 (lower is better)
Translates to: CFSPNPSETITTHLELEAWARGS*ACGALA
Trigger: TGCTAGTGCCCCACATGCCCACGATCCGCGTGCCCA...TGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp CAGATGAGGACAGTGAGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGATTTTCCCACGTGTCTaGGTCCTGCTTTCTGTATGG +
Preference number: 4 (lower is better)
Translates to: QMRTVRHRTDEGLAQGPQIFPRV*VLLSVW
Trigger: CCATACAGAAAGCAGGACCCAGACACGTGGGAAAAT...CTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCTCACTGTCCTCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp GGGAAGGTTTCCTACATACCCAGTCTCTGTAGAAGGCAGGCCAGAGAAAAGGTGTTCGTGCCCGACTCCTaGATCACTTCCCACTCACTG +
Preference number: 4 (lower is better)
Translates to: GKVSYIPSLCRRQAREKVFVPDS*ITSHSL
Trigger: CAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAA...CACCTTTTCTCTGGCCTGCCTTCTACAGAGACTGGGTATGTAGGAAACCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS-3UTR CCA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCTGCAAGAAGAATTCCTaGGCATCTTGCTGCCTGTTA +
Preference number: 4 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSCKKNS*ASCCLL
Trigger: TAACAGGCAGCAAGATGCCCAGGAATTCTTCTTGCA...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCAGATGGGTCTATCAATTaGTTCATCAGGCGATCTTTT +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPDGSIN*FIRRSF
Trigger: AAAAGATCGCCTGATGAACCAATTGATAGACCCATC...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAAGCTACGATTTCCTCTaGAGGTTGGTTATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPSYDFL*RLVIQS
Trigger: GGACTGGATAACCAACCTCCAGAGGAAATCGTAGCT...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CCAGTTGAAGGCCACCTCGGCGCCCATATTTCCAGTGAAGTACACAGCCTTGCGAGCTACGATTTCCTCTaGAGGTTGGTTATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PVEGHLGAHISSEVHSLASYDFL*RLVIQS
Trigger: GGACTGGATAACCAACCTCCAGAGGAAATCGTAGCT...CGCAAGGCTGTGTACTTCACTGGAAATATGGGCGCCGAGGTGGCCTTCAACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR CCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCAAATATTATGCTGCTGTaGGCATCTAGCATTACACCA +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPNIMLL*ASSITP
Trigger: TGGTGTAATGCTAGATGCCCACAGCAGCATAATATT...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGCAGGTCTCCAGGCCATaGGCCTTAGACACCATGTCT +
Preference number: 4 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQQVSRP*ALDTMS
Trigger: AGACATGGTGTCTAAGGCCCATGGCCTGGAGACCTG...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGCAGGTCTCCAGGCCATaGGCCTTAGACACCATGTCT +
Preference number: 4 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMQVSRP*ALDTMS
Trigger: AGACATGGTGTCTAAGGCCCATGGCCTGGAGACCTG...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCACCCAACACCCTCAAGTaGCTAATATCCTTGGTACCT +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPPNTLK*LISLVP
Trigger: AGGTACCAAGGATATTAGCCACTTGAGGGTGTTGGG...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp GTCAGTCAGATTCAACCAGAGGTTTTCTCGCAGGTCGCATCTGGCACACTTCCACTCGCAGGTCGCATCTaGCACACTTCCAACCACATC +
Preference number: 4 (lower is better)
Translates to: VSQIQPEVFSQVASGTLPLAGRI*HTSNHI
Trigger: GATGTGGTTGGAAGTGTGCCAGATGCGACCTGCGAG...TGGAAGTGTGCCAGATGCGACCTGCGAGAAAACCTCTGGTTGAATCTGACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681299.1
CDS-3UTR TCA 90 bp GTCAAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATTCAACCAGAGCACTTGGAGGAATCCTaGCTCCATTGTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VKEPLSTQDRAVSQIQPEHLEES*LHCPAG
Trigger: CCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTG...CTCTGGTTGAATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679350.1
ENST00000681128.1
CDS-3UTR TCA 90 bp GTAATCCACCCTCTCCGTGTAGCGGACTTTCCGGGTCTGACAGCACTGAATGCGAAGTGCTTGGCCAAATaGGGATCCAAAACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: VIHPLRVADFPGLTALNAKCLAK*GSKTGS
Trigger: AGAACCTGTTTTGGATCCTCATTTGGCCAAGCACTT...CGCATTCAGTGCTGTCAGACCCGGAAAGTCCGCTACACGGAGAGGGTGGATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680031.1
CDS-3UTR TCA 90 bp CAGATGAGGACAGTGAGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGGTGGATGTTCCCATGTaGCTGATGAATGCAAATAGC +
Preference number: 4 (lower is better)
Translates to: QMRTVRHRTDEGLAQGPQVDVPM*LMNANS
Trigger: GCTATTTGCATTCATCAGTCACATGGGAACATCCAC...CTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCTCACTGTCCTCATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCATTGGGGCACTTGACATaGCTCCAAAGAGTTATCATG +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPLGHLT*LQRVIM
Trigger: CATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAA...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGCCCAGAGAGGTACAGTaGTTCAGTCCCACCTCACTT +
Preference number: 4 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMPREVQ*FSPTSL
Trigger: AAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGG...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCTCCACATGTCTAATTTaGAGTTCTTTAGGGGCCACA +
Preference number: 4 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTSTCLI*SSLGAT
Trigger: TGTGGCCCCTAAAGAACTTCAAATTAGACATGTGGA...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCTCCACATGTCTAATTTaGAGTTCTTTAGGGGCCACA +
Preference number: 4 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSSTCLI*SSLGAT
Trigger: TGTGGCCCCTAAAGAACTTCAAATTAGACATGTGGA...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp GGGCTGATGTCTGGAAGTTCTTCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGACAAGTATTCAGGGAATaGAGCAAAGCGAGATGTTCA +
Preference number: 4 (lower is better)
Translates to: GLMSGSSSSPGCNPLARRQVFRE*SKARCS
Trigger: TGAACATCTCGCTTTGCTTCATTCCCTGAATACTTG...TCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGAAGAACTTCCAGACATCAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679954.1
CDS-3UTR GCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCACACGTGTCTGGGTCCTaGTTTCTGTATGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPHVSGS*FLYGDF
Trigger: AAAATCTCCATACAGAAAGCAGGACCCAGACACGTG...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp TGTCTCTGTAATGCTCCAGCGCATGCCCGTTGCCCCCAGAGCTGTCAAAGAACCCACGTGTCTGGGTCCTaGTTTCTGTATGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: CLCNAPAHARCPQSCQRTHVSGS*FLYGDF
Trigger: AAAATCTCCATACAGAAAGCAGGACCCAGACACGTG...GGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGAGCATTACAGAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR GCA 90 bp CAAACGGAGAAATGGAGGTCCAGAAGTAACTCTCGTTTCCAAAGACCACACAGACCAGCGCATGCCCGTTaGCCCCAGAGCTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: QTEKWRSRSNSRFQRPHRPAHAR*PQSCQR
Trigger: TCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGG...TCTGTGTGGTCTTTGGAAACGAGAGTTACTTCTGGACCTCCATTTCTCCGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681299.1
CDS-3UTR GCA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCAAAAGAATAAACATCTaGCCCGTCAGGAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSKRINI*PVRSDG
Trigger: ACCATCACTCCTGACGGGGCAGATGTTTATTCTTTT...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCAAAAGAATAAACATCTaGCCCGTCAGGAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTKRINI*PVRSDG
Trigger: ACCATCACTCCTGACGGGGCAGATGTTTATTCTTTT...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp TGTCCTGAAGCAATAAAGATGGGCTTCGCAGCGCACACTGAGTGGACTGGACCTTTGGCTTCAGTTTCGTaGCCGACTCCTGGATCACTT +
Preference number: 4 (lower is better)
Translates to: CPEAIKMGFAAHTEWTGPLASVS*PTPGSL
Trigger: AAGTGATCCAGGAGTCGGGCACGAAACTGAAGCCAA...AGGTCCAGTCCACTCAGTGTGCGCTGCGAAGCCCATCTTTATTGCTTCAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS-3UTR GCA 90 bp TGTGGCTTGTGCTCCTCCTTCATCACCTGTTCAATGAGTTCAGATTTCACCGGAGGAGAGATCCCGTTCTaGTGTGGCTTGTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CGLCSSFITCSMSSDFTGGEIPF*CGLCSS
Trigger: GGAGGAGCACAAGCCACAGCAGAACGGGATCTCTCC...TCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGAGGAGCACAAGCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR GCA 90 bp GGCCTTAAACATGCGCGGAGAGATCCCGTTCTGCTGTGGCTTGTGCTCCTCCTTAATTCCTGGGCATCTTaGTGCCTGTTAGAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: GLKHARRDPVLLWLVLLLNSWAS*CLLEEN
Trigger: ATTCTCCTCTAACAGGCAGCAAGATGCCCAGGAATT...AAGGAGGAGCACAAGCCACAGCAGAACGGGATCTCTCCGCGCATGTTTAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR GCA 90 bp CAGATGAGGACAGTGAGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGAATTCCTGGGCATCTTaGTGCCTGTTAGAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: QMRTVRHRTDEGLAQGPQNSWAS*CLLEEN
Trigger: ATTCTCCTCTAACAGGCAGCAAGATGCCCAGGAATT...CTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCTCACTGTCCTCATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp GGCCTTAAACATGCGCGGAGAGATCCCGTTCTGCTGTGGCTTGTGCTCCTCCTTACTAGATTCACCAGGTaGAAGAAGAATTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GLKHARRDPVLLWLVLLLTRFTR*KKNSWA
Trigger: TGCCCAGGAATTCTTCTTGCACCTGGTGAATCTAGT...AAGGAGGAGCACAAGCCACAGCAGAACGGGATCTCTCCGCGCATGTTTAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR GCA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCTTGCTTGTAGGGCACTaGTCCAGAAATCATCAACAT +
Preference number: 4 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSLLVGH*SRNHQH
Trigger: ATGTTGATGATTTCTGGAGCAGTGCCCTACAAGCAA...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCTTGCTTGTAGGGCACTaGTCCAGAAATCATCAACAT +
Preference number: 4 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSLLVGH*SRNHQH
Trigger: ATGTTGATGATTTCTGGAGCAGTGCCCTACAAGCAA...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp CAGCGGCTCAGCAAAATCTGGCTCTTCCATGTGAACAATGATCCAGTTGAAGGCCACAGCCTTGCGACATaGTTCCAGCGGGAAACCCAT +
Preference number: 4 (lower is better)
Translates to: QRLSKIWLFHVNNDPVEGHSLAT*FQRETH
Trigger: ATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGTG...GCCTTCAACTGGATCATTGTTCACATGGAAGAGCCAGATTTTGCTGAGCCGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR GCA 90 bp TGGCACGTACCAACTCAGGAAGGGGTCTTCTGTTTGCTTCTGCTTCCCTTCTCGCATCTTGCTGCCTTGTaGTCCTCCTTCATCACCTGT +
Preference number: 4 (lower is better)
Translates to: WHVPTQEGVFCLLLLPFSHLAAL*SSFITC
Trigger: ACAGGTGATGAAGGAGGAGCACAAGGCAGCAAGATG...CGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTCCTGAGTTGGTACGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680853.1
CDS-3UTR CCA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGTGGGCACGCGGATCGTaGGCATGTGGGGCACTAGCA +
Preference number: 4 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWWARGS*ACGALA
Trigger: TGCTAGTGCCCCACATGCCCACGATCCGCGTGCCCA...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CATCTGGCACACTTCCAACCACTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTCCACCTTCAGAATTaGGAGAGTCGTAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: HLAHFQPLGGILTPLSSWVHLQN*ESRRRR
Trigger: CCTTCTCCTACGACTCTCCCAATTCTGAAGGTGGAC...CCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTGGTTGGAAGTGTGCCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497380.1
CDS-3UTR CCA 90 bp CCAACCACTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGTTGGCATTTTCCCACGTGTCTaGGTCCTGCTTTCTGTATGG +
Preference number: 4 (lower is better)
Translates to: PTTWRNPDSIVQLGEVVGIFPRV*VLLSVW
Trigger: CCATACAGAAAGCAGGACCCAGACACGTGGGAAAAT...GCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497380.1
ENST00000679350.1
ENST00000681128.1
CDS-3UTR CCA 90 bp CCCCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCAGAATTTTCCCACGTGTCTaGGTCCTGCTTTCTGTATGG +
Preference number: 4 (lower is better)
Translates to: PPELSKNHFPHRTEPSVRIFPRV*VLLSVW
Trigger: CCATACAGAAAGCAGGACCCAGACACGTGGGAAAAT...TCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CCA 90 bp GTTGCCCCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTACTCCATTGTCCAGCTaGGTGAGGTTGTTGGCATAT +
Preference number: 4 (lower is better)
Translates to: VAPRAVKEPLSTQDRAVSTPLSS*VRLLAY
Trigger: ATATGCCAACAACCTCACCCAGCTGGACAATGGAGT...ACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CCA 90 bp ACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTCCCTTCGTGCCCGACTCCTaGATCACTTCCCACTCACTG +
Preference number: 4 (lower is better)
Translates to: TWSWKHPVNERLSRSSFPFVPDS*ITSHSL
Trigger: CAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAA...GGGAAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCAAGTAGTCAAATATTCTaGGAAGGTTTCCTACATACG +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPSSQIF*EGFLHT
Trigger: CGTATGTAGGAAACCTTCCCAGAATATTTGACTACT...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp TGGGCATCTTGCTGCCTGTTAGAGGAGAATTCCGGGTGGCTCTTGCTTACAAAGGAGGAGAATTCCGGGTaGCTCTTGCTTACAAAGGCC +
Preference number: 4 (lower is better)
Translates to: WASCCLLEENSGWLLLTKEENSG*LLLTKA
Trigger: GGCCTTTGTAAGCAAGAGCCACCCGGAATTCTCCTC...CTTTGTAAGCAAGAGCCACCCGGAATTCTCCTCTAACAGGCAGCAAGATGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR CCA 90 bp CACCCTCTCCGTGTAGCGGACTTTCCGGGTCTGACAGCACTGAATGCGTTCTTCTGCAAGAAGAATTCCTaGGCATCTTGCTGCCTGTTA +
Preference number: 4 (lower is better)
Translates to: HPLRVADFPGLTALNAFFCKKNS*ASCCLL
Trigger: TAACAGGCAGCAAGATGCCCAGGAATTCTTCTTGCA...GAAGAACGCATTCAGTGCTGTCAGACCCGGAAAGTCCGCTACACGGAGAGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR CCA 90 bp GCAGGCACTAAATGGTATCTTGGCACGTACCAACTCAGGAAGGGGTCTTCTGTTTGGTTGCCGCCTCCATaGCCACAGGTAACTGCATCA +
Preference number: 4 (lower is better)
Translates to: AGTKWYLGTYQLRKGSSVWLPPP*PQVTAS
Trigger: TGATGCAGTTACCTGTGGCCATGGAGGCGGCAACCA...AACAGAAGACCCCTTCCTGAGTTGGTACGTGCCAAGATACCATTTAGTGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
CDS-3UTR CCA 90 bp CTCGGCGCCCATATTTCCAGTGAAGTACACAGCCTTGCGACATGCTTCCAGCGGAAGGCAGGCACTAAATaGTATCTTGGCACGTACCAA +
Preference number: 4 (lower is better)
Translates to: LGAHISSEVHSLATCFQRKAGTK*YLGTYQ
Trigger: TTGGTACGTGCCAAGATACCATTTAGTGCCTGCCTT...CCGCTGGAAGCATGTCGCAAGGCTGTGTACTTCACTGGAAATATGGGCGCCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR CCA 90 bp CAGATGAGGACAGTGAGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGAAGGCAGGCACTAAATaGTATCTTGGCACGTACCAA +
Preference number: 4 (lower is better)
Translates to: QMRTVRHRTDEGLAQGPQKAGTK*YLGTYQ
Trigger: TTGGTACGTGCCAAGATACCATTTAGTGCCTGCCTT...CTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCTCACTGTCCTCATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCACGGCTCAGCAAAATCTaGCTCTTCCATGTGAACAAT +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPRLSKI*LFHVNN
Trigger: ATTGTTCACATGGAAGAGCCAGATTTTGCTGAGCCG...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp AATACCATTGTTCAGATGAGGACAGTGAGGCACAGGACGGATGAAGGACTTGCCCAGGTCTCCAGGCCATaGGCCTTAGACACCATGTCT +
Preference number: 4 (lower is better)
Translates to: NTIVQMRTVRHRTDEGLAQVSRP*ALDTMS
Trigger: AGACATGGTGTCTAAGGCCCATGGCCTGGAGACCTG...GGCAAGTCCTTCATCCGTCCTGTGCCTCACTGTCCTCATCTGAACAATGGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680734.1
CDS-3UTR CCA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCTACTACAACCCACCATaGCATACCACATTCTACTCA +
Preference number: 4 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTYYNPP*HTTFYS
Trigger: TGAGTAGAATGTGGTATGCCATGGTGGGTTGTAGTA...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp AGGTTTCCTACATACCCAGTCTCTGTAGAAGGCAGGCCAGAGAAAAGGTGGCAAGTGCCCTGGTCTGCATaGAAGGCACTTACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RFPTYPVSVEGRPEKRWQVPWSA*KALTLS
Trigger: AGAGAGCGTAAGTGCCTTCCATGCAGACCAGGGCAC...TTGCCACCTTTTCTCTGGCCTGCCTTCTACAGAGACTGGGTATGTAGGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS-3UTR CCA 90 bp GTACCAACTCAGGAAGGGGTCTTCTGTTTGCTTCTGCTTCCCTTCTCGTTAGTTGCTCTTACCCCTTGTTaGTTGCCGCCTCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: VPTQEGVFCLLLLPFSLVALTPC*LPPPWP
Trigger: TGGCCATGGAGGCGGCAACCAACAAGGGGTAAGAGC...AACTAACGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTCCTGAGTTGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681560.1
CDS-3UTR TCA 90 bp CTCTGTAATGCTCCAGCGCATGCCCGTTGCCCCCAGAGCTGTCAAAGAACCACTATGGAGATTTTGAGCTaGGAACTGCATCACAAGCAA +
Preference number: 4 (lower is better)
Translates to: LCNAPAHARCPQSCQRTTMEILS*ELHHKQ
Trigger: TTGCTTGTGATGCAGTTCTCAGCTCAAAATCTCCAT...AGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGAGCATTACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR TCA 90 bp AGCGCATGCCCGTTGCCCCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACATCTGTATGGAGATTTTaGGCTGAGAACTGCATCACA +
Preference number: 4 (lower is better)
Translates to: SACPLPPELSKNHFPHRTSVWRF*AENCIT
Trigger: TGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGA...TGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR TCA 90 bp CTCTGTAATGCTCCAGCGCATGCCCGTTGCCCCCAGAGCTGTCAAAGAACCACTTCTGTATGGAGATTTTaGGCTGAGAACTGCATCACA +
Preference number: 4 (lower is better)
Translates to: LCNAPAHARCPQSCQRTTSVWRF*AENCIT
Trigger: TGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGA...AGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGAGCATTACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR TCA 90 bp CAGATGAGGACAGTGAGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCTGTATGGAGATTTTaGGCTGAGAACTGCATCACA +
Preference number: 4 (lower is better)
Translates to: QMRTVRHRTDEGLAQGPQSVWRF*AENCIT
Trigger: TGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGA...CTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCTCACTGTCCTCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp CGCATGCCCGTTGCCCCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACAGATCTGTATGGAGATTTTaGGCTGAGAACTGCATCACA +
Preference number: 4 (lower is better)
Translates to: RMPVAPRAVKEPLSTQDRSVWRF*AENCIT
Trigger: TGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGA...TCTGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR TCA 90 bp TCCTTCATCACCTGTTCAATGAGTTCAGATTTCACCGGAGGCTTTGAATACTGGCTGCCCCGTCAGGAGTaGTGGTTCCCAGTTTCACGG +
Preference number: 4 (lower is better)
Translates to: SFITCSMSSDFTGGFEYWLPRQE*WFPVSR
Trigger: CCGTGAAACTGGGAACCATCACTCCTGACGGGGCAG...CCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680436.1
CDS-3UTR TCA 90 bp AATGAAGCAAAGCGAGATGTTTTCACACCCGCAGACTTTGCTTGTAGGGCACTGATCGCTTGGGTTTTCTaGGCCGATGCGGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: NEAKRDVFTPADFACRALIAWVF*ADAVPL
Trigger: GAGAGGAACCGCATCGGCTCAGAAAACCCAAGCGAT...CAGTGCCCTACAAGCAAAGTCTGCGGGTGTGAAAACATCTCGCTTTGCTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680853.1
CDS-3UTR TCA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCCAAGTATTCAGGGAATaGAGCAAAGCGAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSQVFRE*SKARCF
Trigger: AAAACATCTCGCTTTGCTTCATTCCCTGAATACTTG...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCACAAATTTGGGGCACTTaGCATGACTCCAAAGAGTTA +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPQIWGT*HDSKEL
Trigger: TAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTG...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGGTGATGCCTACAAGATaGCAAGGACGGCCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQVMPTR*QGRPFC
Trigger: ACAGAAAGGCCGTCCTTGTCATCTTGTAGGCATCAC...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp CTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTCCCCCCAACAGGACTCTaGGTTCACAAGCAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LESFDEVSSTILFLSKSLPPTGL*VHKQGS
Trigger: GCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGG...GAGGGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
CDS-3UTR TCA 90 bp CATATATATGTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCACCCCCAACAGGACTCTaGGTTCACAAGCAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: HIYVQPSESPNRTLSSQAPPTGL*VHKQGS
Trigger: GCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGG...TGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATATATATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
CDS-3UTR TCA 90 bp AACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATTCAACCAGAGGTTTTCTACCTTGGAGGAATCCTaGCTCCATTGTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: NHFPHRTEPSVRFNQRFSTLEES*LHCPAG
Trigger: CCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGGT...AGAAAACCTCTGGTTGAATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681299.1
CDS-3UTR GCA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGCTGCAGCCATCTTCCTaGCTCCGCTGCCGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: KITDKFGALDMTPKSYHVLQPSS*LRCRPA
Trigger: TGCCGGGCGGCAGCGGAGGCAGGAAGATGGCTGCAG...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp CATATATATGTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCACTCGCCGATGTCTCCTaGAGCCATCTTCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: HIYVQPSESPNRTLSSQALADVS*SHLPAS
Trigger: GGAGGCAGGAAGATGGCTGCAGGAGACATCGGCGAG...TGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATATATATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCACCAAAAATGTATTCATaGATACATAGAGTCCACCTT +
Preference number: 4 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPPKMYS*IHRVHL
Trigger: AAGGTGGACTCTATGTATGCATGAATACATTTTTGG...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCACATGTCTTTTCAGGTaGATGTATACACTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSTCLFR*MYTLCP
Trigger: TGGACAGAGTGTATACATGCACCTGAAAAGACATGT...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp GGACAGAGCCGTCAGTCAGATTCAACCAGAGGTTTTCTCGCAGGTCGCATCTGGCACGTGTCTGGGTCCTaGTTTCTGTATGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: GQSRQSDSTRGFLAGRIWHVSGS*FLYGDF
Trigger: AAAATCTCCATACAGAAAGCAGGACCCAGACACGTG...CCAGATGCGACCTGCGAGAAAACCTCTGGTTGAATCTGACTGACGGCTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR GCA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGCCAGCGCATGCCCGTTaGCCCCAGAGCTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWPAHAR*PQSCQR
Trigger: TCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGG...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp CTGTCCCATGCATATGAAGCATATCAATTCCAAAATGCGCTAAGTGCTTGGCCACCAGCGCATGCCCGTTaGCCCCAGAGCTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: LSHAYEAYQFQNALSAWPPAHAR*PQSCQR
Trigger: TCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGG...TGGCCAAGCACTTAGCGCATTTTGGAATTGATATGCTTCATATGCATGGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680055.1
CDS-3UTR GCA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGTTGGCTTCAGTTTCGTaGCCGACTCCTGGATCACTT +
Preference number: 4 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMLASVS*PTPGSL
Trigger: AAGTGATCCAGGAGTCGGGCACGAAACTGAAGCCAA...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp ACTTCCCACTCACTGACCCTCAGCTTGATGTCATTGTCCTGGAGCCCATTCTCTTTGGCTTCAGTTTCGTaGCCGACTCCTGGATCACTT +
Preference number: 4 (lower is better)
Translates to: TSHSLTLSLMSLSWSPFSLASVS*PTPGSL
Trigger: AAGTGATCCAGGAGTCGGGCACGAAACTGAAGCCAA...AGAGAATGGGCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679783.1
ENST00000680055.1
CDS-3UTR GCA 90 bp GGAAGGTTTCCTACATACGCTCTCTGGAATTCTGGGATGCTGAAGATGGCCTGCTTGGCTTCAGTTTCGTaGCCGACTCCTGGATCACTT +
Preference number: 4 (lower is better)
Translates to: GRFPTYALWNSGMLKMACLASVS*PTPGSL
Trigger: AAGTGATCCAGGAGTCGGGCACGAAACTGAAGCCAA...GCAGGCCATCTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGGAAACCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000680651.1
ENST00000681649.1
CDS-3UTR GCA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGTTCTGCTGTGGCTTGTaGTCCTCCTTCATCACCTGT +
Preference number: 4 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMFCCGL*SSFITC
Trigger: ACAGGTGATGAAGGAGGAGCACAAGCCACAGCAGAA...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp GTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGGGGAGCAGACTAGATTCACCAGGTaGAAGAAGAATTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VQPSESPNRTLSSQAGEQTRFTR*KKNSWA
Trigger: TGCCCAGGAATTCTTCTTGCACCTGGTGAATCTAGT...CTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp TGGCACGTACCAACTCAGGAAGGGGTCTTCTGTTTGCTTCTGCTTCCCTTCTCGGGTTTTCTGAGCCGATaGGGTTCCTCTCTACTAGAT +
Preference number: 4 (lower is better)
Translates to: WHVPTQEGVFCLLLLPFSGFLSR*GSSLLD
Trigger: ATCTAGTAGAGAGGAACCGCATCGGCTCAGAAAACC...CGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTCCTGAGTTGGTACGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680853.1
CDS-3UTR GCA 90 bp CTCCAGCAGAAGCTGCCCCTCCATAACCAGGCATGGTCAGCGGCTCAGCAAAATTTGCTTGTAGGGCACTaGTCCAGAAATCATCAACAT +
Preference number: 4 (lower is better)
Translates to: LQQKLPLHNQAWSAAQQNLLVGH*SRNHQH
Trigger: ATGTTGATGATTTCTGGAGCAGTGCCCTACAAGCAA...ATTTTGCTGAGCCGCTGACCATGCCTGGTTATGGAGGGGCAGCTTCTGCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR GCA 90 bp CACACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTCCCATCTCGGCCAGCTaGATCACTGATGACTCATCG +
Preference number: 4 (lower is better)
Translates to: HTWSWKHPVNERLSRSSFPISAS*ITDDSS
Trigger: CGATGAGTCATCAGTGATGCAGCTGGCCGAGATGGG...AAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp CTGTCTTCTTCAAACTCAGGGTGGCTAAAGATCCAATCCAGTGCTCTTTCCAGGCCCATCTCGGCCAGCTaGATCACTGATGACTCATCG +
Preference number: 4 (lower is better)
Translates to: LSSSNSGWLKIQSSALSRPISAS*ITDDSS
Trigger: CGATGAGTCATCAGTGATGCAGCTGGCCGAGATGGG...CCTGGAAAGAGCACTGGATTGGATCTTTAGCCACCCTGAGTTTGAAGAAGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680905.1
ENST00000681098.1
ENST00000681362.1
CDS-3UTR GCA 90 bp CAGATGAGGACAGTGAGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGACAATGAAACAAATATaGCCAACACCCTCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: QMRTVRHRTDEGLAQGPQTMKQI*PTPSSG
Trigger: GCCACTTGAGGGTGTTGGGCATATTTGTTTCATTGT...CTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCTCACTGTCCTCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp TTGGCACGTACCAACTCAGGAAGGGGTCTTCTGTTTGCTTCTGCTTCCCTTCTCAATTCCTGGGCATCTTaGTGCCTTGTGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LARTNSGRGLLFASASLLNSWAS*CLVLLL
Trigger: AAGGAGGAGCACAAGGCAGCAAGATGCCCAGGAATT...GAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTCCTGAGTTGGTACGTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680853.1
CDS-3UTR CCA 90 bp TCCATTGTCCAGCTGGGTGAGGTTGTTGGCATATTTAGATACTGGCAATTCATTTGGGCACGCGGATCGTaGGCATGTGGGGCACTAGCA +
Preference number: 4 (lower is better)
Translates to: SIVQLGEVVGIFRYWQFIWARGS*ACGALA
Trigger: TGCTAGTGCCCCACATGCCCACGATCCGCGTGCCCA...AATGAATTGCCAGTATCTAAATATGCCAACAACCTCACCCAGCTGGACAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497380.1
ENST00000679350.1
CDS-3UTR CCA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGGTCCACCTTCAGAATTaGGAGAGTCGTAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMVHLQN*ESRRRR
Trigger: CCTTCTCCTACGACTCTCCCAATTCTGAAGGTGGAC...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CAGGTTCTTCAGACCCGTGTAGCCAGGACCATACATTGGCTTCAGTTTCGTGCCCCTACATACGCTCTCTaGAATTCTGGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QVLQTRVARTIHWLQFRAPTYAL*NSGMLK
Trigger: CTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGG...GGCACGAAACTGAAGCCAATGTATGGTCCTGGCTACACGGGTCTGAAGAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000680651.1
ENST00000681649.1
CDS-3UTR CCA 90 bp AGTTCTTCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATGGTTGATATCAAGTCCCCTGGCTCGGAGATaGTTGATATCAAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: SSSSPGCNPLARRWLISSPLARR*LISSRS
Trigger: AGACCTACTTGATATCAACCATCTCCGAGCCAGGGG...ACTTGATATCAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGAAGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679954.1
ENST00000680167.1
CDS-3UTR CCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGCTCCATAACCAGGCATaGTCAGCGGCTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQLHNQA*SAAQQN
Trigger: ATTTTGCTGAGCCGCTGACCATGCCTGGTTATGGAG...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CTTGGGATTTCATTTTCAGGCATTGTTCAGATGAGGACAGTGAGGCACAGGACGCAGGTCTCCAGGCCATaGGCCTTAGACACCATGTCT +
Preference number: 4 (lower is better)
Translates to: LGISFSGIVQMRTVRHRTQVSRP*ALDTMS
Trigger: AGACATGGTGTCTAAGGCCCATGGCCTGGAGACCTG...CGTCCTGTGCCTCACTGTCCTCATCTGAACAATGCCTGAAAATGAAATCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681736.1
CDS-3UTR CCA 90 bp CAGATGAGGACAGTGAGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGCATGTAAGTCTAGAGTaGGGCTGTCCAATAGAAGTA +
Preference number: 4 (lower is better)
Translates to: QMRTVRHRTDEGLAQGPQHVSLE*GCPIEV
Trigger: TACTTCTATTGGACAGCCCCACTCTAGACTTACATG...CTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCTCACTGTCCTCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGAACATCAAAACCTGCTaGACAGGTGGGCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQNIKTC*TGGHRN
Trigger: GTTCCTGTGCCCACCTGTCCAGCAGGTTTTGATGTT...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp GGAAGGTTTCCTACATACCCAGTCTCTGTAGAAGGCAGGCCAGAGAAAAGGTGGGGCACTTACGCTCTCTaGAATTCTGGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GRFPTYPVSVEGRPEKRWGTYAL*NSGMLK
Trigger: CTTCAGCATCCCAGAATTCCAGAGAGCGTAAGTGCC...CCACCTTTTCTCTGGCCTGCCTTCTACAGAGACTGGGTATGTAGGAAACCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS-3UTR CCA 90 bp ACAGGACAGAGCCGTCAGTCAGATTCAACCAGAGGTTTTCTCGCAGGTCGCATCAACACACCAGCACCTTaGAGGAATCCTGACTCCATT +
Preference number: 4 (lower is better)
Translates to: TGQSRQSDSTRGFLAGRINTPAP*RNPDSI
Trigger: AATGGAGTCAGGATTCCTCCAAGGTGCTGGTGTGTT...GATGCGACCTGCGAGAAAACCTCTGGTTGAATCTGACTGACGGCTCTGTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681299.1
3UTR CAA 72 bp TCTTGCTGCCTGTTAGAGGAGAATTCCGGGTGGCTCTaGCTTACAAAGGCCTTAAACATGCGCGGAGAGATC +
Preference number: 4 (lower is better)
Translates to: SCCLLEENSGWL*LTKALNMRGEI
Trigger: GATCTCTCCGCGCATGTTTAAGGCCTTTGTAAGCAAGAGCCACCCGGAATTCTCCTCTAACAGGCAGCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR TCA 90 bp CGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTTGATGTCATTATGGAGATTTTGAGCTaGGAACTGCATCACAAGCAA +
Preference number: 4 (lower is better)
Translates to: RARLLDHFPLTDPQLDVIMEILS*ELHHKQ
Trigger: TTGCTTGTGATGCAGTTCTCAGCTCAAAATCTCCAT...AATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679783.1
CDS-3UTR TCA 90 bp GTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGGGGAGCAGATGGAGATTTTGAGCTaGGAACTGCATCACAAGCAA +
Preference number: 4 (lower is better)
Translates to: VQPSESPNRTLSSQAGEQMEILS*ELHHKQ
Trigger: TTGCTTGTGATGCAGTTCTCAGCTCAAAATCTCCAT...CTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR TCA 90 bp CTCACTGACCCTCAGCTTGATGTCATTGTCCTGGAGCCCATTCTCTGTCCCATGAAGTGCTTGGCCAAATaGGGATCCAAAACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LTDPQLDVIVLEPILCPMKCLAK*GSKTGS
Trigger: AGAACCTGTTTTGGATCCTCATTTGGCCAAGCACTT...CATGGGACAGAGAATGGGCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679783.1
ENST00000680055.1
CDS-3UTR TCA 90 bp AAACGAAAAACATCGCTTGGGTTTTCTGAGCCGATGCGGTTCCTCTCTACTAGAATCGCTTGGGTTTTCTaGGCCGATGCGGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: KRKTSLGFSEPMRFLSTRIAWVF*ADAVPL
Trigger: GAGAGGAACCGCATCGGCTCAGAAAACCCAAGCGAT...TCTAGTAGAGAGGAACCGCATCGGCTCAGAAAACCCAAGCGATGTTTTTCGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR TCA 90 bp GTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGGGGAGCAGCATCAGGCGATCTTTTaGGTCATCAGGAATGACTAT +
Preference number: 4 (lower is better)
Translates to: VQPSESPNRTLSSQAGEQHQAIF*VIRNDY
Trigger: ATAGTCATTCCTGATGACTCAAAAGATCGCCTGATG...CTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR TCA 90 bp TCTCCTGGCTGTAACCCCCTGGCTCGGAGATGGTTGATATCAAGTAGGTCTGGCCATCAGGCGATCTTTTaGGTCATCAGGAATGACTAT +
Preference number: 4 (lower is better)
Translates to: SPGCNPLARRWLISSRSGHQAIF*VIRNDY
Trigger: ATAGTCATTCCTGATGACTCAAAAGATCGCCTGATG...GCCAGACCTACTTGATATCAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680167.1
CDS-3UTR TCA 90 bp CACACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTCGCCCATATTTCCAGTaGAGTACACAGCCTTGCGAC +
Preference number: 4 (lower is better)
Translates to: HTWSWKHPVNERLSRSSFRPYFQ*STQPCD
Trigger: GTCGCAAGGCTGTGTACTTCACTGGAAATATGGGCG...AAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR TCA 90 bp ATGATCCAGTTGAAGGCCACCTCGGCGCCCATATTTCCAGTGAAGTACACAGCCTCTGGCTCTTCCATGTaGACAATGATCCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: MIQLKATSAPIFPVKYTASGSSM*TMIQLK
Trigger: CTTCAACTGGATCATTGTTCACATGGAAGAGCCAGA...GGCTGTGTACTTCACTGGAAATATGGGCGCCGAGGTGGCCTTCAACTGGATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR TCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGAGAGGCCACTATCACTaGCCCCCAAAGCAAAATAGA +
Preference number: 4 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQRGHYH*PPKQNR
Trigger: TCTATTTTGCTTTGGGGGTCAGTGATAGTGGCCTCT...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCCTTCTCGAAGGTTCCTaGGTCATAGTTTTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSLLEGS*VIVLLK
Trigger: TTTTAACAAAACTATGACTCAGGAACCTTCGAGAAG...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCATTTGACCAAATACTCTaGAATAGCAACTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPFDQIL*NSNSRD
Trigger: GTCTCTGGAGTTGCTATTTCAGAGTATTTGGTCAAA...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAAAAACAAGCCATTTTTaGCGTGGGTTTGGAGTCATT +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPKTSHF*RGFGVI
Trigger: AATGACTCCAAACCCACGTCAAAAATGGCTTGTTTT...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGCCCACTTGTTTCAAATaGAAAGGCCCAGAGAGGTAC +
Preference number: 4 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQPTCFK*KGPERY
Trigger: GTACCTCTCTGGGCCTTTTCATTTGAAACAAGTGGG...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGGTAACACTGTGCAGGTaGTCTCAGACACCAACTCAA +
Preference number: 4 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMVTLCR*SQTPTQ
Trigger: TTGAGTTGGTGTCTGAGATCACCTGCACAGTGTTAC...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp ACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATTCAACCAGAGGTTTTCTCCAAGCAATTGTTACCTaGCACAGAGCCATGCGCATC +
Preference number: 4 (lower is better)
Translates to: TTFHTGQSRQSDSTRGFLQAIVT*HRAMRI
Trigger: GATGCGCATGGCTCTGTGTCAGGTAACAATTGCTTG...GAGAAAACCTCTGGTTGAATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681128.1
CDS-3UTR GCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAACATGTCTTTTCAGGTaGATGTATACACTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPTCLFR*MYTLCP
Trigger: TGGACAGAGTGTATACATGCACCTGAAAAGACATGT...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp CAACCACTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGTTGGCACACGTGTCTGGGTCCTaGTTTCTGTATGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: QPLGGILTPLSSWVRLLAHVSGS*FLYGDF
Trigger: AAAATCTCCATACAGAAAGCAGGACCCAGACACGTG...TGCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497380.1
ENST00000679350.1
ENST00000681128.1
CDS-3UTR GCA 90 bp GCATATCAATTCCAAAATGCGCTAAGTGCTTGGCCAAATGAGGATCCAAAACAGCCAGCGCATGCCCGTTaGCCCCAGAGCTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: AYQFQNALSAWPNEDPKQPAHAR*PQSCQR
Trigger: TCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGG...CTGTTTTGGATCCTCATTTGGCCAAGCACTTAGCGCATTTTGGAATTGATATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000680055.1
ENST00000680276.1
ENST00000681109.1
CDS-3UTR GCA 90 bp GCAAAGCGAGATGTTTTCACACCCGCAGACTTTGCTTGTAGGGCACTGCTCCAGACTAGATTCACCAGGTaGAAGAAGAATTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: AKRDVFTPADFACRALLQTRFTR*KKNSWA
Trigger: TGCCCAGGAATTCTTCTTGCACCTGGTGAATCTAGT...CTGGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGAAAACATCTCGCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680853.1
CDS-3UTR GCA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGGGTTTTCTGAGCCGATaGGGTTCCTCTCTACTAGAT +
Preference number: 4 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMGFLSR*GSSLLD
Trigger: ATCTAGTAGAGAGGAACCGCATCGGCTCAGAAAACC...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp TTTTCACACCCGCAGACTTTGCTTGTAGGGCACTGCTCCAGAAATCATCAACATTTCATCCTTGTTGGTTaGCGCCTCCATGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: FSHPQTLLVGHCSRNHQHFILVG*RLHGHR
Trigger: CCTGTGGCCATGGAGGCGGCAACCAACAAGGATGAA...ATGTTGATGATTTCTGGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680853.1
CDS-3UTR GCA 90 bp CTCAGGGTGGCTAAAGATCCAATCCAGTGCTCTTTCCAGGTTATTATTCGTTGCCCCATCTCGGCCAGCTaGATCACTGATGACTCATCG +
Preference number: 4 (lower is better)
Translates to: LRVAKDPIQCSFQVIIRCPISAS*ITDDSS
Trigger: CGATGAGTCATCAGTGATGCAGCTGGCCGAGATGGG...GCAACGAATAATAACCTGGAAAGAGCACTGGATTGGATCTTTAGCCACCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680905.1
ENST00000681098.1
CDS-3UTR GCA 90 bp TGCCTGAATAGCCTGATTTCGCTGAAATCCCATGGAGGTGATGATAGCTACGATCACAGCCTTGCGACATaGTTCCAGCGGGAAACCCAT +
Preference number: 4 (lower is better)
Translates to: CLNSLISLKSHGGDDSYDHSLAT*FQRETH
Trigger: ATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGTG...ATCGTAGCTATCATCACCTCCATGGGATTTCAGCGAAATCAGGCTATTCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679768.1
ENST00000679893.1
ENST00000680905.1
ENST00000681098.1
CDS-3UTR GCA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGAACCCGGGAGGAGGCTaGAGTGAGCTGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWNPGGG*SELRLH
Trigger: GTGCAATCTCAGCTCACTGCAGCCTCCTCCCGGGTT...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp TGGCACGTACCAACTCAGGAAGGGGTCTTCTGTTTGCTTCTGCTTCCCTTCTCGGCAAATCAAAGACCTTaGAATCGCTCTTACCCCTTG +
Preference number: 4 (lower is better)
Translates to: WHVPTQEGVFCLLLLPFSANQRP*NRSYPL
Trigger: CAAGGGGTAAGAGCGATTGCAAGGTCTTTGATTTGC...CGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTCCTGAGTTGGTACGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681560.1
CDS-3UTR CCA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGCGGATCGTGGGCATGTaGGGCACTAGCAGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: KITDKFGALDMTPKSYHVRIVGM*GTSSSP
Trigger: CGGCGAGCTGCTAGTGCCCCACATGCCCACGATCCG...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp AGAAGGCCATGTCCTAACTTAGTCATCTGTGTGTTGAAATCTTGTGTTGGATCTTGGGCACGCGGATCGTaGGCATGTGGGGCACTAGCA +
Preference number: 4 (lower is better)
Translates to: RRPCPNLVICVLKSCVGSWARGS*ACGALA
Trigger: TGCTAGTGCCCCACATGCCCACGATCCGCGTGCCCA...AGATCCAACACAAGATTTCAACACACAGATGACTAAGTTAGGACATGGCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681051.1
CDS-3UTR CCA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGATTTTCCCACGTGTCTaGGTCCTGCTTTCTGTATGG +
Preference number: 4 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMIFPRV*VLLSVW
Trigger: CCATACAGAAAGCAGGACCCAGACACGTGGGAAAAT...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp ACTTCCCACTCACTGACCCTCAGCTTGATGTCATTGTCCTGGAGCCCATTCTCTACTCCATTGTCCAGCTaGGTGAGGTTGTTGGCATAT +
Preference number: 4 (lower is better)
Translates to: TSHSLTLSLMSLSWSPFSTPLSS*VRLLAY
Trigger: ATATGCCAACAACCTCACCCAGCTGGACAATGGAGT...AGAGAATGGGCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679783.1
CDS-3UTR CCA 90 bp CACTTCCAACCACTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGACACTTCCAACCACTTaGAGGAATCCTGACTCCATT +
Preference number: 4 (lower is better)
Translates to: HFQPLGGILTPLSSWVRLTLPTT*RNPDSI
Trigger: AATGGAGTCAGGATTCCTCCAAGTGGTTGGAAGTGT...CAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTGGTTGGAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497380.1
ENST00000679350.1
ENST00000681128.1
CDS-3UTR CCA 90 bp TGTTTCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCACTCGCAGGTCGCATCTaGCACACTTCCAACCACTTG +
Preference number: 4 (lower is better)
Translates to: CFSPNPSETITTHLELEALAGRI*HTSNHL
Trigger: CAAGTGGTTGGAAGTGTGCCAGATGCGACCTGCGAG...TGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGTTGATGTCATTGTCCTaGAGCCCATTCTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMLMSLS*SPFSVP
Trigger: TGGGACAGAGAATGGGCTCCAGGACAATGACATCAA...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp ATACATTGGCTTCAGTTTCGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCCTACATACGCTCTCTaGAATTCTGGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: IHWLQFRARLLDHFPLTDPTYAL*NSGMLK
Trigger: CTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGG...GTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAAACTGAAGCCAATGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000680651.1
ENST00000681649.1
CDS-3UTR CCA 90 bp TCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATGGTTGATATCAAGTAGGTCTAAGGCAGGCACTAAATaGTATCTTGGCACGTACCAA +
Preference number: 4 (lower is better)
Translates to: SSPGCNPLARRWLISSRSKAGTK*YLGTYQ
Trigger: TTGGTACGTGCCAAGATACCATTTAGTGCCTGCCTT...AGACCTACTTGATATCAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680167.1
CDS-3UTR CCA 90 bp GTGAACAATGATCCAGTTGAAGGCCACCTCGGCGCCCATATTTCCAGTGAAGTACTCCATAACCAGGCATaGTCAGCGGCTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: VNNDPVEGHLGAHISSEVLHNQA*SAAQQN
Trigger: ATTTTGCTGAGCCGCTGACCATGCCTGGTTATGGAG...TACTTCACTGGAAATATGGGCGCCGAGGTGGCCTTCAACTGGATCATTGTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR CCA 90 bp CCCATATTTCCAGTGAAGTACACAGCCTTGCGACATGCTTCCAGCGGGAAACCCATTTCCTCTGGAGGTTaGTTATCCAGTCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PIFPVKYTALRHASSGKPISSGG*LSSPEA
Trigger: TGCTTCTGGACTGGATAACCAACCTCCAGAGGAAAT...GGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGTGTACTTCACTGGAAATATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR CCA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGCCCAACACCCTCAAGTaGCTAATATCCTTGGTACCT +
Preference number: 4 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMPNTLK*LISLVP
Trigger: AGGTACCAAGGATATTAGCCACTTGAGGGTGTTGGG...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CATGTCTCTCGGTCACATGGCACCAAAGGATCACCCCATATATTCCTTCATGTCTGTCTCTCGGTCACATaGCACCAAAGGATCACCCCA +
Preference number: 4 (lower is better)
Translates to: HVSRSHGTKGSPHIFLHVCLSVT*HQRITP
Trigger: TGGGGTGATCCTTTGGTGCCATGTGACCGAGAGACA...GACATGAAGGAATATATGGGGTGATCCTTTGGTGCCATGTGACCGAGAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000680734.1
ENST00000681736.1
ENST00000681918.1
CDS-3UTR CCA 90 bp GTCAAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATTCAACCAGAGCCACTGGAAAGCCATTaGAGAGTAGTCAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: VKEPLSTQDRAVSQIQPEPLESH*RVVRTA
Trigger: GGCTGTTCTGACTACTCTCCAATGGCTTTCCAGTGG...CTCTGGTTGAATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680276.1
CDS-3UTR CCA 90 bp GGAAGGTTTCCTACATACGCTCTCTGGAATTCTGGGATGCTGAAGATGGCCTGCTTGATGTCATTGTCCTaGAGCCCATTCTCCCATGCA +
Preference number: 4 (lower is better)
Translates to: GRFPTYALWNSGMLKMACLMSLS*SPFSHA
Trigger: TGCATGGGAGAATGGGCTCCAGGACAATGACATCAA...GCAGGCCATCTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGGAAACCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680307.1
CDS-3UTR CCA 90 bp CGCATGCCCGTTGCCCCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACAGATTACAAACGGAGAAATaGAGGTCCAGAAGTAACTCT +
Preference number: 4 (lower is better)
Translates to: RMPVAPRAVKEPLSTQDRLQTEK*RSRSNS
Trigger: AGAGTTACTTCTGGACCTCCATTTCTCCGTTTGTAA...TCTGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681299.1
3UTR CAA 72 bp AGGCTGAGACAAGCGGCACATCAAGAGTGGCAGGATTaGTGCAGTGTTTCAACACACCCAGCTTTGAACAGA +
Preference number: 4 (lower is better)
Translates to: RLRQAAHQEWQD*CSVSTHPALNR
Trigger: TCTGTTCAAAGCTGGGTGTGTTGAAACACTGCACAAATCCTGCCACTCTTGATGTGCCGCTTGTCTCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp TACATTGGCTTCAGTTTCGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCTCTGTATGGAGATTTTaGGCTGAGAACTGCATCACA +
Preference number: 4 (lower is better)
Translates to: YIGFSFVPDSWITSHSLTSVWRF*AENCIT
Trigger: TGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGA...GGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAAACTGAAGCCAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679783.1
CDS-3UTR TCA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGCACTTGGAGGAATCCTaGCTCCATTGTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWHLEES*LHCPAG
Trigger: CCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTG...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp TCCCATGCATATGAAGCATATCAATTCCAAAATGCGCTAAGTGCTTGGCCAAATCTGCCCCGTCAGGAGTaGTGGTTCCCAGTTTCACGG +
Preference number: 4 (lower is better)
Translates to: SHAYEAYQFQNALSAWPNLPRQE*WFPVSR
Trigger: CCGTGAAACTGGGAACCATCACTCCTGACGGGGCAG...ATTTGGCCAAGCACTTAGCGCATTTTGGAATTGATATGCTTCATATGCATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680055.1
CDS-3UTR TCA 90 bp GGAAGGTTTCCTACATACGCTCTCTGGAATTCTGGGATGCTGAAGATGGCCTGCAAGTGCTTGGCCAAATaGGGATCCAAAACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GRFPTYALWNSGMLKMACKCLAK*GSKTGS
Trigger: AGAACCTGTTTTGGATCCTCATTTGGCCAAGCACTT...GCAGGCCATCTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGGAAACCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000681649.1
CDS-3UTR TCA 90 bp CTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTCATCGCTTGGGTTTTCTaGGCCGATGCGGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LESFDEVSSTILFLSKSLIAWVF*ADAVPL
Trigger: GAGAGGAACCGCATCGGCTCAGAAAACCCAAGCGAT...GAGGGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR TCA 90 bp CAGATGAGGACAGTGAGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGAGTCAAGACCAAAAGTaGACTTCTTTATCTGCACTA +
Preference number: 4 (lower is better)
Translates to: QMRTVRHRTDEGLAQGPQSQDQK*TSLSAL
Trigger: TAGTGCAGATAAAGAAGTTCACTTTTGGTCTTGACT...CTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCTCACTGTCCTCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp TCCATCCTTGACTCTAGGTCCTTCGGGCTTGGCCTCAGAAATAATGTTTGCATTCGCCCATATTTCCAGTaGAGTACACAGCCTTGCGAC +
Preference number: 4 (lower is better)
Translates to: SILDSRSFGLGLRNNVCIRPYFQ*STQPCD
Trigger: GTCGCAAGGCTGTGTACTTCACTGGAAATATGGGCG...AATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAAGGATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680905.1
ENST00000681098.1
ENST00000681362.1
CDS-3UTR TCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGTCTGGCTCTTCCATGTaGACAATGATCCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQSGSSM*TMIQLK
Trigger: CTTCAACTGGATCATTGTTCACATGGAAGAGCCAGA...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGTTGGGGCACTTGACATaGCTCCAAAGAGTTATCATG +
Preference number: 4 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMLGHLT*LQRVIM
Trigger: CATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAA...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGCCAAAGGATCACCTATaGGACAGGGACCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWPKDHL*DRDPHH
Trigger: GTGATGGGGGTCCCTGTCTCATAGGTGATCCTTTGG...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGGGAGTCATTATTCTATaGCACTCACTCTGCCCTAAG +
Preference number: 4 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMGVIIL*HSLCPK
Trigger: CTTAGGGCAGAGTGAGTGTCATAGAATAATGACTCC...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGGAGGCTGAGGCAGGTTaGGGTCAAGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWEAEAG*GQEFKT
Trigger: GGTCTTGAACTCTTGACCTCAACCTGCCTCAGCCTC...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp ACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTCCCGAAGCACCCAGTGAATaGGAGGCTTTCAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: TWSWKHPVNERLSRSSFPEAPSE*EAFKIF
Trigger: GAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTC...GGGAAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
CDS-3UTR TCA 90 bp TCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCACCCAATATGTACAACCTTCTaGGTCCCCCAACAGGACTCT +
Preference number: 4 (lower is better)
Translates to: SLQIPLKPLPHTWSWKHPICTTF*VPQQDS
Trigger: AGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATAT...TGGGTGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
CDS-3UTR GCA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCCAAAAATGTATTCATaGATACATAGAGTCCACCTT +
Preference number: 4 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTPKMYS*IHRVHL
Trigger: AAGGTGGACTCTATGTATGCATGAATACATTTTTGG...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp GGGAAGGTTTCCTACATACGCTCTCTGGAATTCTGGGATGCTGAAGATGGCCTGCACGTGTCTGGGTCCTaGTTTCTGTATGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: GKVSYIRSLEFWDAEDGLHVSGS*FLYGDF
Trigger: AAAATCTCCATACAGAAAGCAGGACCCAGACACGTG...CAGGCCATCTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGGAAACCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679783.1
CDS-3UTR GCA 90 bp AGAAGGCCATGTCCTAACTTAGTCATCTGTGTGTTGAAATCTTGTGTTGGATCTCCAGCGCATGCCCGTTaGCCCCAGAGCTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: RRPCPNLVICVLKSCVGSPAHAR*PQSCQR
Trigger: TCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGG...AGATCCAACACAAGATTTCAACACACAGATGACTAAGTTAGGACATGGCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680436.1
CDS-3UTR GCA 90 bp GCATATGAAGCATATCAATTCCAAAATGCGCTAAGTGCTTGGCCAAATGAGGATCCAGCGCATGCCCGTTaGCCCCAGAGCTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: AYEAYQFQNALSAWPNEDPAHAR*PQSCQR
Trigger: TCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGG...ATCCTCATTTGGCCAAGCACTTAGCGCATTTTGGAATTGATATGCTTCATATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000680055.1
ENST00000680276.1
ENST00000681109.1
CDS-3UTR GCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAATATCAATTCCAAAATaGGCTAAGTGCTTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPISIPK*AKCLAK
Trigger: TTTGGCCAAGCACTTAGCGCATTTTGGAATTGATAT...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp CACACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTTTGGCTTCAGTTTCGTaGCCGACTCCTGGATCACTT +
Preference number: 4 (lower is better)
Translates to: HTWSWKHPVNERLSRSSFLASVS*PTPGSL
Trigger: AAGTGATCCAGGAGTCGGGCACGAAACTGAAGCCAA...AAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp AAGGTTTCCTACATACGCTCTCTGGAATTCTGGGATGCTGAAGATGGCCTGCATTTGGCTTCAGTTTCGTaGCCGACTCCTGGATCACTT +
Preference number: 4 (lower is better)
Translates to: KVSYIRSLEFWDAEDGLHLASVS*PTPGSL
Trigger: AAGTGATCCAGGAGTCGGGCACGAAACTGAAGCCAA...ATGCAGGCCATCTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGGAAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000680651.1
ENST00000681649.1
CDS-3UTR GCA 90 bp ACATCGCTTGGGTTTTCTGAGCCGATGCGGTTCCTCTCTACTAGATTCACCAGGACTAGATTCACCAGGTaGAAGAAGAATTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TSLGFSEPMRFLSTRFTRTRFTR*KKNSWA
Trigger: TGCCCAGGAATTCTTCTTGCACCTGGTGAATCTAGT...CCTGGTGAATCTAGTAGAGAGGAACCGCATCGGCTCAGAAAACCCAAGCGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR GCA 90 bp ATCTTGCTGCCTGTTAGAGGAGAATTCCGGGTGGCTCTTGCTTACAAAGGCCTTGGTTTTCTGAGCCGATaGGGTTCCTCTCTACTAGAT +
Preference number: 4 (lower is better)
Translates to: ILLPVRGEFRVALAYKGLGFLSR*GSSLLD
Trigger: ATCTAGTAGAGAGGAACCGCATCGGCTCAGAAAACC...AAGGCCTTTGTAAGCAAGAGCCACCCGGAATTCTCCTCTAACAGGCAGCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR GCA 90 bp TTGACTCTAGGTCCTTCGGGCTTGGCCTCAGAAATAATGTTTGCATTGGCATTACCCATCTCGGCCAGCTaGATCACTGATGACTCATCG +
Preference number: 4 (lower is better)
Translates to: LTLGPSGLASEIMFALALPISAS*ITDDSS
Trigger: CGATGAGTCATCAGTGATGCAGCTGGCCGAGATGGG...TAATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680905.1
ENST00000681098.1
ENST00000681362.1
CDS-3UTR GCA 90 bp CATATATATGTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCACACAGCCTTGCGACATaGTTCCAGCGGGAAACCCAT +
Preference number: 4 (lower is better)
Translates to: HIYVQPSESPNRTLSSQAHSLAT*FQRETH
Trigger: ATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGTG...TGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATATATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp TTGACTCTAGGTCCTTCGGGCTTGGCCTCAGAAATAATGTTTGCATTGGCATTACACAGCCTTGCGACATaGTTCCAGCGGGAAACCCAT +
Preference number: 4 (lower is better)
Translates to: LTLGPSGLASEIMFALALHSLAT*FQRETH
Trigger: ATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGTG...TAATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680905.1
ENST00000681098.1
ENST00000681362.1
CDS-3UTR GCA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCAAAGATCCAATCCAGTaGTCTTTCCAGGTTATTATT +
Preference number: 4 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSKDPIQ*SFQVII
Trigger: AATAATAACCTGGAAAGAGCACTGGATTGGATCTTT...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCGATACTTTGCAGAATTaGGTTTCCTATTTACGGATT +
Preference number: 4 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSDTLQN*VSYLRI
Trigger: AATCCGTAAATAGGAAACGCAATTCTGCAAAGTATC...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCGATACTTTGCAGAATTaGGTTTCCTATTTACGGATT +
Preference number: 4 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTDTLQN*VSYLRI
Trigger: AATCCGTAAATAGGAAACGCAATTCTGCAAAGTATC...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp ACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTCCCTTTCCCTCGAGTTCTTaGAGGTCTGGGTCTATGAGA +
Preference number: 4 (lower is better)
Translates to: TWSWKHPVNERLSRSSFPFPSSS*RSGSMR
Trigger: TCTCATAGACCCAGACCTGCAAGAACTCGAGGGAAA...GGGAAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602704.2
CDS-3UTR CCA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGTGGGCACGCGGATCGTaGGCATGTGGGGCACTAGCA +
Preference number: 4 (lower is better)
Translates to: KITDKFGALDMTPKSYHVWARGS*ACGALA
Trigger: TGCTAGTGCCCCACATGCCCACGATCCGCGTGCCCA...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp TCAGTCAGATTCAACCAGAGGTTTTCTCGCAGGTCGCATCTGGCACACTTCCAAATTTTCCCACGTGTCTaGGTCCTGCTTTCTGTATGG +
Preference number: 4 (lower is better)
Translates to: SVRFNQRFSRRSHLAHFQIFPRV*VLLSVW
Trigger: CCATACAGAAAGCAGGACCCAGACACGTGGGAAAAT...TTGGAAGTGTGCCAGATGCGACCTGCGAGAAAACCTCTGGTTGAATCTGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CCA 90 bp CCTCAGCTTGATGTCATTGTCCTGGAGCCCATTCTCTGTCCCATGCATATGAAGATTTTCCCACGTGTCTaGGTCCTGCTTTCTGTATGG +
Preference number: 4 (lower is better)
Translates to: PQLDVIVLEPILCPMHMKIFPRV*VLLSVW
Trigger: CCATACAGAAAGCAGGACCCAGACACGTGGGAAAAT...CTTCATATGCATGGGACAGAGAATGGGCTCCAGGACAATGACATCAAGCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679783.1
CDS-3UTR CCA 90 bp TCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCACCCAACTCCATTGTCCAGCTaGGTGAGGTTGTTGGCATAT +
Preference number: 4 (lower is better)
Translates to: SLQIPLKPLPHTWSWKHPTPLSS*VRLLAY
Trigger: ATATGCCAACAACCTCACCCAGCTGGACAATGGAGT...TGGGTGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGACACTTCCAACCACTTaGAGGAATCCTGACTCCATT +
Preference number: 4 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQTLPTT*RNPDSI
Trigger: AATGGAGTCAGGATTCCTCCAAGTGGTTGGAAGTGT...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATTACACTTCCAACCACTTaGAGGAATCCTGACTCCATT +
Preference number: 4 (lower is better)
Translates to: PRAVKEPLSTQDRAVSQITLPTT*RNPDSI
Trigger: AATGGAGTCAGGATTCCTCCAAGTGGTTGGAAGTGT...AATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679350.1
ENST00000681128.1
CDS-3UTR CCA 90 bp TACATTGGCTTCAGTTTCGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCAATGCGCTAAGTGCTTaGCCAAATGAGGATCCAAAA +
Preference number: 4 (lower is better)
Translates to: YIGFSFVPDSWITSHSLTNALSA*PNEDPK
Trigger: TTTTGGATCCTCATTTGGCCAAGCACTTAGCGCATT...GGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAAACTGAAGCCAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679783.1
ENST00000680055.1
ENST00000680307.1
ENST00000681649.1
CDS-3UTR CCA 90 bp ACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTCCCCCTACATACGCTCTCTaGAATTCTGGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: TWSWKHPVNERLSRSSFPPTYAL*NSGMLK
Trigger: CTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGG...GGGAAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGTGCAAGAAGAATTCCTaGGCATCTTGCTGCCTGTTA +
Preference number: 4 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQCKKNS*ASCCLL
Trigger: TAACAGGCAGCAAGATGCCCAGGAATTCTTCTTGCA...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTCTGGTTGCCGCCTCCATaGCCACAGGTAACTGCATCA +
Preference number: 4 (lower is better)
Translates to: LESFDEVSSTILFLSKSLWLPPP*PQVTAS
Trigger: TGATGCAGTTACCTGTGGCCATGGAGGCGGCAACCA...GAGGGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp ACTAAATGGTATCTTGGCACGTACCAACTCAGGAAGGGGTCTTCTGTTTGCTTCTCAGTTCATCCTTGTTaGTTGCCGCCTCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: TKWYLGTYQLRKGSSVCFSVHPC*LPPPWP
Trigger: TGGCCATGGAGGCGGCAACCAACAAGGATGAACTGA...GAAGCAAACAGAAGACCCCTTCCTGAGTTGGTACGTGCCAAGATACCATTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680853.1
CDS-3UTR CCA 90 bp GAAGCAAAGCGAGATGTTTTCACACCCGCAGACTTTGCTTGTAGGGCACTGCTCAAGGCAGGCACTAAATaGTATCTTGGCACGTACCAA +
Preference number: 4 (lower is better)
Translates to: EAKRDVFTPADFACRALLKAGTK*YLGTYQ
Trigger: TTGGTACGTGCCAAGATACCATTTAGTGCCTGCCTT...GAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGAAAACATCTCGCTTTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
CDS-3UTR CCA 90 bp CACACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTCTCCATAACCAGGCATaGTCAGCGGCTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: HTWSWKHPVNERLSRSSFLHNQA*SAAQQN
Trigger: ATTTTGCTGAGCCGCTGACCATGCCTGGTTATGGAG...AAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp TCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCACCCAAGCTACGATTTCCTCTaGAGGTTGGTTATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SLQIPLKPLPHTWSWKHPSYDFL*RLVIQS
Trigger: GGACTGGATAACCAACCTCCAGAGGAAATCGTAGCT...TGGGTGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGTGCTTTGTTTCACCTaGTTGGTTCTGTTTATTTTC +
Preference number: 4 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPVLCFT*LVLFIF
Trigger: GAAAATAAACAGAACCAACCAGGTGAAACAAAGCAC...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp TGTTTCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCACCACACACTTGGAGCTaGAAGCACCCAGTGAATGAG +
Preference number: 4 (lower is better)
Translates to: CFSPNPSETITTHLELEAPHTWS*KHPVNE
Trigger: CTCATTCACTGGGTGCTTCCAGCTCCAAGTGTGTGG...TGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
CDS-3UTR CCA 90 bp CCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATTTCATCAGTATCTAGATaGGAGAGTCGTAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PRAVKEPLSTQDRAVSQISSVSR*ESRRRR
Trigger: CCTTCTCCTACGACTCTCCCATCTAGATACTGATGA...AATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679350.1
3UTR CAA 72 bp CATGGAGGTGATGATAGCTACGATTTCCTCTGGAGGTaGGTTATCCAGTCCAGAAGCACCAAAAACAGAGGC +
Preference number: 4 (lower is better)
Translates to: HGGDDSYDFLWR*VIQSRSTKNRG
Trigger: GCCTCTGTTTTTGGTGCTTCTGGACTGGATAACCAACCTCCAGAGGAAATCGTAGCTATCATCACCTCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679768.1
ENST00000679893.1
ENST00000680905.1
ENST00000681098.1
3UTR CAA 72 bp TCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATGGTaGATATCAAGTAGGTCTGGCATATCAATAGAAACA +
Preference number: 4 (lower is better)
Translates to: SSPGCNPLARRW*ISSRSGISIET
Trigger: TGTTTCTATTGATATGCCAGACCTACTTGATATCAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679954.1
CDS-3UTR TCA 90 bp TTCCAACCACTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGTTGATGGAGATTTTGAGCTaGGAACTGCATCACAAGCAA +
Preference number: 4 (lower is better)
Translates to: FQPLGGILTPLSSWVRLLMEILS*ELHHKQ
Trigger: TTGCTTGTGATGCAGTTCTCAGCTCAAAATCTCCAT...CAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTGGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497380.1
ENST00000679350.1
ENST00000681128.1
CDS-3UTR TCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTACTGCCCCGTCAGGAGTaGTGGTTCCCAGTTTCACGG +
Preference number: 4 (lower is better)
Translates to: VVDNFVSTYLGITALAKLLPRQE*WFPVSR
Trigger: CCGTGAAACTGGGAACCATCACTCCTGACGGGGCAG...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp GTCAAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATTCAACCAGAGAAGTGCTTGGCCAAATaGGGATCCAAAACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: VKEPLSTQDRAVSQIQPEKCLAK*GSKTGS
Trigger: AGAACCTGTTTTGGATCCTCATTTGGCCAAGCACTT...CTCTGGTTGAATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680276.1
CDS-3UTR TCA 90 bp GTTTCCTACATACGCTCTCTGGAATTCTGGGATGCTGAAGATGGCCTGCATGACAAGTGCTTGGCCAAATaGGGATCCAAAACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: VSYIRSLEFWDAEDGLHDKCLAK*GSKTGS
Trigger: AGAACCTGTTTTGGATCCTCATTTGGCCAAGCACTT...GTCATGCAGGCCATCTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000681649.1
CDS-3UTR TCA 90 bp GTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGGGGAGCAGTCTGTCCCATGCATATaGAGCATATCAATTCCAAAA +
Preference number: 4 (lower is better)
Translates to: VQPSESPNRTLSSQAGEQSVPCI*SISIPK
Trigger: TTTTGGAATTGATATGCTTCATATGCATGGGACAGA...CTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR TCA 90 bp CCTGTTAGAGGAGAATTCCGGGTGGCTCTTGCTTACAAAGGCCTTAAACATGCGTCATCACCTGTTCAATaGGTTCAGATTTCACCGGAG +
Preference number: 4 (lower is better)
Translates to: PVRGEFRVALAYKGLKHASSPVQ*VQISPE
Trigger: CTCCGGTGAAATCTGAACTCATTGAACAGGTGATGA...CGCATGTTTAAGGCCTTTGTAAGCAAGAGCCACCCGGAATTCTCCTCTAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR TCA 90 bp AAGCGAGATGTTTTCACACCCGCAGACTTTGCTTGTAGGGCACTGCTCCAGAAATCATCACCTGTTCAATaGGTTCAGATTTCACCGGAG +
Preference number: 4 (lower is better)
Translates to: KRDVFTPADFACRALLQKSSPVQ*VQISPE
Trigger: CTCCGGTGAAATCTGAACTCATTGAACAGGTGATGA...TTTCTGGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGAAAACATCTCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680853.1
CDS-3UTR TCA 90 bp TCTCCTGGCTGTAACCCCCTGGCTCGGAGATGGTTGATATCAAGTAGGTCTGGCAGTCAAGACCAAAAGTaGACTTCTTTATCTGCACTA +
Preference number: 4 (lower is better)
Translates to: SPGCNPLARRWLISSRSGSQDQK*TSLSAL
Trigger: TAGTGCAGATAAAGAAGTTCACTTTTGGTCTTGACT...GCCAGACCTACTTGATATCAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679954.1
CDS-3UTR TCA 90 bp GTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGGGGAGCAGAGTCAAGACCAAAAGTaGACTTCTTTATCTGCACTA +
Preference number: 4 (lower is better)
Translates to: VQPSESPNRTLSSQAGEQSQDQK*TSLSAL
Trigger: TAGTGCAGATAAAGAAGTTCACTTTTGGTCTTGACT...CTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR TCA 90 bp TGTTTCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCATGGCTCGGAGATGGTTaGTATCAAGTAGGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: CFSPNPSETITTHLELEAWLGDG*YQVGLA
Trigger: TGCCAGACCTACTTGATATCAACCATCTCCGAGCCA...TGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR TCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGCATCAGGCGATCTTTTaGGTCATCAGGAATGACTAT +
Preference number: 4 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQHQAIF*VIRNDY
Trigger: ATAGTCATTCCTGATGACTCAAAAGATCGCCTGATG...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp CTGAATAGCCTGATTTCGCTGAAATCCCATGGAGGTGATGATAGCTACGATTTCCGCCCATATTTCCAGTaGAGTACACAGCCTTGCGAC +
Preference number: 4 (lower is better)
Translates to: LNSLISLKSHGGDDSYDFRPYFQ*STQPCD
Trigger: GTCGCAAGGCTGTGTACTTCACTGGAAATATGGGCG...GAAATCGTAGCTATCATCACCTCCATGGGATTTCAGCGAAATCAGGCTATTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679768.1
ENST00000679893.1
ENST00000680905.1
ENST00000681098.1
CDS-3UTR TCA 90 bp AGGTCCTTCGGGCTTGGCCTCAGAAATAATGTTTGCATTGGCATTATTCTCCATCGCCCATATTTCCAGTaGAGTACACAGCCTTGCGAC +
Preference number: 4 (lower is better)
Translates to: RSFGLGLRNNVCIGIILHRPYFQ*STQPCD
Trigger: GTCGCAAGGCTGTGTACTTCACTGGAAATATGGGCG...ATGGAGAATAATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680905.1
ENST00000681098.1
ENST00000681362.1
CDS-3UTR TCA 90 bp CACACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTGAAGCACCCAGTGAATaGGAGGCTTTCAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: HTWSWKHPVNERLSRSSFEAPSE*EAFKIF
Trigger: GAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTC...AAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
CDS-3UTR TCA 90 bp AAGGTGGCAAAATGTCCTGAAGCAATAAAGATGGGCTTCGCAGCGCACACTGAGGGTGGCAAAATGTCCTaGAGCAATAAAGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: KVAKCPEAIKMGFAAHTEGGKMS*SNKDGL
Trigger: AAGCCCATCTTTATTGCTTCAGGACATTTTGCCACC...CTCAGTGTGCGCTGCGAAGCCCATCTTTATTGCTTCAGGACATTTTGCCACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS-3UTR GCA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGCTCGCCGATGTCTCCTaGAGCCATCTTCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: KITDKFGALDMTPKSYHVLADVS*SHLPAS
Trigger: GGAGGCAGGAAGATGGCTGCAGGAGACATCGGCGAG...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp CAGAGCTGTCAAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATTCACACGTGTCTGGGTCCTaGTTTCTGTATGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: QSCQRTTFHTGQSRQSDSHVSGS*FLYGDF
Trigger: AAAATCTCCATACAGAAAGCAGGACCCAGACACGTG...TGAATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR GCA 90 bp TCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCACCCACACGTGTCTGGGTCCTaGTTTCTGTATGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: SLQIPLKPLPHTWSWKHPHVSGS*FLYGDF
Trigger: AAAATCTCCATACAGAAAGCAGGACCCAGACACGTG...TGGGTGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp TTCCACACAGGACAGAGCCGTCAGTCAGATTCAACCAGAGGTTTTCTCGCAGGTAAAAGAATAAACATCTaGCCCGTCAGGAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: FHTGQSRQSDSTRGFLAGKRINI*PVRSDG
Trigger: ACCATCACTCCTGACGGGGCAGATGTTTATTCTTTT...ACCTGCGAGAAAACCTCTGGTTGAATCTGACTGACGGCTCTGTCCTGTGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680276.1
CDS-3UTR GCA 90 bp CAGTTTCGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTTGATATATCAATTCCAAAATaGGCTAAGTGCTTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: QFRARLLDHFPLTDPQLDISIPK*AKCLAK
Trigger: TTTGGCCAAGCACTTAGCGCATTTTGGAATTGATAT...ATCAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679783.1
ENST00000680055.1
CDS-3UTR GCA 90 bp CTTCAGTTTCGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTTATATCAATTCCAAAATaGGCTAAGTGCTTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: LQFRARLLDHFPLTDPQLISIPK*AKCLAK
Trigger: TTTGGCCAAGCACTTAGCGCATTTTGGAATTGATAT...AAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAAACTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679783.1
ENST00000680055.1
CDS-3UTR GCA 90 bp AAACTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCGGAGAGATCCCGTTCTaGTGTGGCTTGTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KLESFDEVSSTILFLSKSGEIPF*CGLCSS
Trigger: GGAGGAGCACAAGCCACAGCAGAACGGGATCTCTCC...GGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp AGAAGGCCATGTCCTAACTTAGTCATCTGTGTGTTGAAATCTTGTGTTGGATCTGGAGAGATCCCGTTCTaGTGTGGCTTGTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RRPCPNLVICVLKSCVGSGEIPF*CGLCSS
Trigger: GGAGGAGCACAAGCCACAGCAGAACGGGATCTCTCC...AGATCCAACACAAGATTTCAACACACAGATGACTAAGTTAGGACATGGCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR GCA 90 bp AGTTCTTCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATGGTTGATATCAAGTTTGCTTGTAGGGCACTaGTCCAGAAATCATCAACAT +
Preference number: 4 (lower is better)
Translates to: SSSSPGCNPLARRWLISSLLVGH*SRNHQH
Trigger: ATGTTGATGATTTCTGGAGCAGTGCCCTACAAGCAA...ACTTGATATCAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGAAGAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680167.1
CDS-3UTR GCA 90 bp CCTCGGGCAGGTCCTTCAGAAGGCATTCCAGAACAAGGCATTGTTATCATAGGAGAGATGACAGGTCCATaGATGTTATTGTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PRAGPSEGIPEQGIVIIGEMTGP*MLLSQK
Trigger: CTTCTGGGACAATAACATGCATGGACCTGTCATCTC...TCCTATGATAACAATGCCTTGTTCTGGAATGCCTTCTGAAGGACCTGCCCGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681109.1
CDS-3UTR GCA 90 bp TCCTTCATCACCTGTTCAATGAGTTCAGATTTCACCGGAGGCTTTGAATACTGGGGTTTCCTACATACCTaGCCCGTCAGGAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: SFITCSMSSDFTGGFEYWGFLHT*PVRSDG
Trigger: ACCATCACTCCTGACGGGGCAGGTATGTAGGAAACC...CCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680436.1
CDS-3UTR CCA 90 bp CACGTGTCTGGGTCCTGCTTTCTGTATGGAGATTTTGAGCTGAGAACTGCATCAACTCCATTGTCCAGCTaGGTGAGGTTGTTGGCATAT +
Preference number: 4 (lower is better)
Translates to: HVSGSCFLYGDFELRTASTPLSS*VRLLAY
Trigger: ATATGCCAACAACCTCACCCAGCTGGACAATGGAGT...TGATGCAGTTCTCAGCTCAAAATCTCCATACAGAAAGCAGGACCCAGACACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497380.1
ENST00000679350.1
ENST00000681128.1
CDS-3UTR CCA 90 bp AACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATTCAACCAGAGGTTTTCTACTCCATTGTCCAGCTaGGTGAGGTTGTTGGCATAT +
Preference number: 4 (lower is better)
Translates to: NHFPHRTEPSVRFNQRFSTPLSS*VRLLAY
Trigger: ATATGCCAACAACCTCACCCAGCTGGACAATGGAGT...AGAAAACCTCTGGTTGAATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CCA 90 bp GTCAAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATTCAACCAGAGACACTTCCAACCACTTaGAGGAATCCTGACTCCATT +
Preference number: 4 (lower is better)
Translates to: VKEPLSTQDRAVSQIQPETLPTT*RNPDSI
Trigger: AATGGAGTCAGGATTCCTCCAAGTGGTTGGAAGTGT...CTCTGGTTGAATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679350.1
ENST00000681128.1
CDS-3UTR CCA 90 bp TCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCACCCAACACTTCCAACCACTTaGAGGAATCCTGACTCCATT +
Preference number: 4 (lower is better)
Translates to: SLQIPLKPLPHTWSWKHPTLPTT*RNPDSI
Trigger: AATGGAGTCAGGATTCCTCCAAGTGGTTGGAAGTGT...TGGGTGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp GGGAAGGTTTCCTACATACGCTCTCTGGAATTCTGGGATGCTGAAGATGGCCTGAATGCGCTAAGTGCTTaGCCAAATGAGGATCCAAAA +
Preference number: 4 (lower is better)
Translates to: GKVSYIRSLEFWDAEDGLNALSA*PNEDPK
Trigger: TTTTGGATCCTCATTTGGCCAAGCACTTAGCGCATT...CAGGCCATCTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGGAAACCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000681649.1
CDS-3UTR CCA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGAATGCGCTAAGTGCTTaGCCAAATGAGGATCCAAAA +
Preference number: 4 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQNALSA*PNEDPK
Trigger: TTTTGGATCCTCATTTGGCCAAGCACTTAGCGCATT...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CAGCTTGATGTCATTGTCCTGGAGCCCATTCTCTGTCCCATGCATATGAAGCATTTGATGTCATTGTCCTaGAGCCCATTCTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: QLDVIVLEPILCPMHMKHLMSLS*SPFSVP
Trigger: TGGGACAGAGAATGGGCTCCAGGACAATGACATCAA...ATGCTTCATATGCATGGGACAGAGAATGGGCTCCAGGACAATGACATCAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679783.1
ENST00000680055.1
CDS-3UTR CCA 90 bp GATCTAAAGGCGAGTAGTCAAATATTCTGGGAAGGTTTCCTACATACGCTCTCTTTCGTGCCCGACTCCTaGATCACTTCCCACTCACTG +
Preference number: 4 (lower is better)
Translates to: DLKASSQIFWEGFLHTLSFVPDS*ITSHSL
Trigger: CAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAA...AGAGAGCGTATGTAGGAAACCTTCCCAGAATATTTGACTACTCGCCTTTAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000680651.1
ENST00000681649.1
CDS-3UTR CCA 90 bp AAGGTTTCCTACATACGCTCTCTGGAATTCTGGGATGCTGAAGATGGCCTGCATCCTACATACGCTCTCTaGAATTCTGGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KVSYIRSLEFWDAEDGLHPTYAL*NSGMLK
Trigger: CTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGG...ATGCAGGCCATCTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGGAAACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000680651.1
ENST00000681649.1
CDS-3UTR CCA 90 bp CATATATATGTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCATCAGTTCATCCTTGTTaGTTGCCGCCTCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: HIYVQPSESPNRTLSSQASVHPC*LPPPWP
Trigger: TGGCCATGGAGGCGGCAACCAACAAGGATGAACTGA...TGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATATATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp AAGGCAGGCACTAAATGGTATCTTGGCACGTACCAACTCAGGAAGGGGTCTTCTAAGGCAGGCACTAAATaGTATCTTGGCACGTACCAA +
Preference number: 4 (lower is better)
Translates to: KAGTKWYLGTYQLRKGSSKAGTK*YLGTYQ
Trigger: TTGGTACGTGCCAAGATACCATTTAGTGCCTGCCTT...AGAAGACCCCTTCCTGAGTTGGTACGTGCCAAGATACCATTTAGTGCCTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
CDS-3UTR CCA 90 bp GTGAACAATGATCCAGTTGAAGGCCACCTCGGCGCCCATATTTCCAGTGAAGTACGGCTCAGCAAAATCTaGCTCTTCCATGTGAACAAT +
Preference number: 4 (lower is better)
Translates to: VNNDPVEGHLGAHISSEVRLSKI*LFHVNN
Trigger: ATTGTTCACATGGAAGAGCCAGATTTTGCTGAGCCG...TACTTCACTGGAAATATGGGCGCCGAGGTGGCCTTCAACTGGATCATTGTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR CCA 90 bp AACAATGATCCAGTTGAAGGCCACCTCGGCGCCCATATTTCCAGTGAAGTACACCGGCTCAGCAAAATCTaGCTCTTCCATGTGAACAAT +
Preference number: 4 (lower is better)
Translates to: NNDPVEGHLGAHISSEVHRLSKI*LFHVNN
Trigger: ATTGTTCACATGGAAGAGCCAGATTTTGCTGAGCCG...GTGTACTTCACTGGAAATATGGGCGCCGAGGTGGCCTTCAACTGGATCATTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR CCA 90 bp TCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCACCCACGGCTCAGCAAAATCTaGCTCTTCCATGTGAACAAT +
Preference number: 4 (lower is better)
Translates to: SLQIPLKPLPHTWSWKHPRLSKI*LFHVNN
Trigger: ATTGTTCACATGGAAGAGCCAGATTTTGCTGAGCCG...TGGGTGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp CTGAAATCCCATGGAGGTGATGATAGCTACGATTTCCTCTGGAGGTTGGTTATCCTCCATAACCAGGCATaGTCAGCGGCTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: LKSHGGDDSYDFLWRLVILHNQA*SAAQQN
Trigger: ATTTTGCTGAGCCGCTGACCATGCCTGGTTATGGAG...GATAACCAACCTCCAGAGGAAATCGTAGCTATCATCACCTCCATGGGATTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679768.1
ENST00000679893.1
ENST00000680905.1
ENST00000681098.1
CDS-3UTR CCA 90 bp ACTGTCTTCTTCAAACTCAGGGTGGCTAAAGATCCAATCCAGTGCTCTTTCCAGCTCCATAACCAGGCATaGTCAGCGGCTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: TVFFKLRVAKDPIQCSFQLHNQA*SAAQQN
Trigger: ATTTTGCTGAGCCGCTGACCATGCCTGGTTATGGAG...CTGGAAAGAGCACTGGATTGGATCTTTAGCCACCCTGAGTTTGAAGAAGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680905.1
ENST00000681098.1
CDS-3UTR CCA 90 bp GTCTTCTTCAAACTCAGGGTGGCTAAAGATCCAATCCAGTGCTCTTTCCAGGTTCTCCATAACCAGGCATaGTCAGCGGCTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: VFFKLRVAKDPIQCSFQVLHNQA*SAAQQN
Trigger: ATTTTGCTGAGCCGCTGACCATGCCTGGTTATGGAG...AACCTGGAAAGAGCACTGGATTGGATCTTTAGCCACCCTGAGTTTGAAGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680905.1
ENST00000681098.1
CDS-3UTR CCA 90 bp AACAATGATCCAGTTGAAGGCCACCTCGGCGCCCATATTTCCAGTGAAGTACACATTTCCTCTGGAGGTTaGTTATCCAGTCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: NNDPVEGHLGAHISSEVHISSGG*LSSPEA
Trigger: TGCTTCTGGACTGGATAACCAACCTCCAGAGGAAAT...GTGTACTTCACTGGAAATATGGGCGCCGAGGTGGCCTTCAACTGGATCATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR CCA 90 bp CTGATTTCGCTGAAATCCCATGGAGGTGATGATAGCTACGATTTCCTCTGGAGGAGCTACGATTTCCTCTaGAGGTTGGTTATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LISLKSHGGDDSYDFLWRSYDFL*RLVIQS
Trigger: GGACTGGATAACCAACCTCCAGAGGAAATCGTAGCT...CCTCCAGAGGAAATCGTAGCTATCATCACCTCCATGGGATTTCAGCGAAATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679768.1
ENST00000679893.1
ENST00000680905.1
ENST00000681098.1
CDS-3UTR TCA 90 bp GACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTTGATGTCATTGTCCTGGTCTGTCCCATGCATATaGAGCATATCAATTCCAAAA +
Preference number: 4 (lower is better)
Translates to: DSWITSHSLTLSLMSLSWSVPCI*SISIPK
Trigger: TTTTGGAATTGATATGCTTCATATGCATGGGACAGA...CCAGGACAATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679783.1
ENST00000680055.1
CDS-3UTR TCA 90 bp CACACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTTCTGGCTCTTCCATGTaGACAATGATCCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: HTWSWKHPVNERLSRSSFSGSSM*TMIQLK
Trigger: CTTCAACTGGATCATTGTTCACATGGAAGAGCCAGA...AAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR TCA 90 bp CATATATATGTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGCTGGAAGCACCCAGTaGATGAGAGGCTTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: HIYVQPSESPNRTLSSQAAGSTQ*MRGFQD
Trigger: ATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGC...TGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATATATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
CDS-3UTR TCA 90 bp GGGAAGGTTTCCTACATACGCTCTCTGGAATTCTGGGATGCTGAAGATGGCCTGCTCACCCCATGCATATaGAGCATATCAATTCCAAAA +
Preference number: 4 (lower is better)
Translates to: GKVSYIRSLEFWDAEDGLLTPCI*SISIPK
Trigger: TTTTGGAATTGATATGCTTCATATGCATGGGGTGAG...CAGGCCATCTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGGAAACCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681649.1
CDS-3UTR GCA 90 bp CCAACCACTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGTTGGCCCAAAAATGTATTCATaGATACATAGAGTCCACCTT +
Preference number: 4 (lower is better)
Translates to: PTTWRNPDSIVQLGEVVGPKMYS*IHRVHL
Trigger: AAGGTGGACTCTATGTATGCATGAATACATTTTTGG...GCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTGGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497380.1
CDS-3UTR GCA 90 bp CTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGTTGGCATATTTACACGTGTCTGGGTCCTaGTTTCTGTATGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: LGGILTPLSSWVRLLAYLHVSGS*FLYGDF
Trigger: AAAATCTCCATACAGAAAGCAGGACCCAGACACGTG...TAAATATGCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497380.1
ENST00000679350.1
ENST00000681128.1
CDS-3UTR GCA 90 bp CATATATATGTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCATTCTGCTGTGGCTTGTaGTCCTCCTTCATCACCTGT +
Preference number: 4 (lower is better)
Translates to: HIYVQPSESPNRTLSSQAFCCGL*SSFITC
Trigger: ACAGGTGATGAAGGAGGAGCACAAGCCACAGCAGAA...TGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATATATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTAGGAGAGATCCCGTTCTaGTGTGGCTTGTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VVDNFVSTYLGITALAKLGEIPF*CGLCSS
Trigger: GGAGGAGCACAAGCCACAGCAGAACGGGATCTCTCC...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp ATCACCTGTTCAATGAGTTCAGATTTCACCGGAGGCTTTGAATACTGGCCTGAGGGTTTTCTGAGCCGATaGGGTTCCTCTCTACTAGAT +
Preference number: 4 (lower is better)
Translates to: ITCSMSSDFTGGFEYWPEGFLSR*GSSLLD
Trigger: ATCTAGTAGAGAGGAACCGCATCGGCTCAGAAAACC...CTCAGGCCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR GCA 90 bp GCAGGCACTAAATGGTATCTTGGCACGTACCAACTCAGGAAGGGGTCTTCTGTTTTGCTTGTAGGGCACTaGTCCAGAAATCATCAACAT +
Preference number: 4 (lower is better)
Translates to: AGTKWYLGTYQLRKGSSVLLVGH*SRNHQH
Trigger: ATGTTGATGATTTCTGGAGCAGTGCCCTACAAGCAA...AACAGAAGACCCCTTCCTGAGTTGGTACGTGCCAAGATACCATTTAGTGCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
CDS-3UTR GCA 90 bp GTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGGGGAGCAGAAAGATCCAATCCAGTaGTCTTTCCAGGTTATTATT +
Preference number: 4 (lower is better)
Translates to: VQPSESPNRTLSSQAGEQKDPIQ*SFQVII
Trigger: AATAATAACCTGGAAAGAGCACTGGATTGGATCTTT...CTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp CTTAATTCTTCATTCAATCAGTTATTTGCTGATCACTCACCATGGGCCAGGCACATGGGCCAGGCACAGTaGTGGGGAAGCTACTTTGAA +
Preference number: 4 (lower is better)
Translates to: LNSSFNQLFADHSPWARHMGQAQ*WGSYFE
Trigger: TTCAAAGTAGCTTCCCCAGCACTGTGCCTGGCCCAT...GTGCCTGGCCCATGGTGAGTGATCAGCAAATAACTGATTGAATGAAGAATTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679769.1
CDS-3UTR CCA 90 bp CTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTCGTCCACCTTCAGAATTaGGAGAGTCGTAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LESFDEVSSTILFLSKSLVHLQN*ESRRRR
Trigger: CCTTCTCCTACGACTCTCCCAATTCTGAAGGTGGAC...GAGGGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp TGTTTCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCAATTTTCCCACGTGTCTaGGTCCTGCTTTCTGTATGG +
Preference number: 4 (lower is better)
Translates to: CFSPNPSETITTHLELEAIFPRV*VLLSVW
Trigger: CCATACAGAAAGCAGGACCCAGACACGTGGGAAAAT...TGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp CACACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTTGCAAGAAGAATTCCTaGGCATCTTGCTGCCTGTTA +
Preference number: 4 (lower is better)
Translates to: HTWSWKHPVNERLSRSSFCKKNS*ASCCLL
Trigger: TAACAGGCAGCAAGATGCCCAGGAATTCTTCTTGCA...AAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp CTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTCCCCCTGGCTCGGAGATaGTTGATATCAAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: LESFDEVSSTILFLSKSLPLARR*LISSRS
Trigger: AGACCTACTTGATATCAACCATCTCCGAGCCAGGGG...GAGGGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGCTCCATAACCAGGCATaGTCAGCGGCTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWLHNQA*SAAQQN
Trigger: ATTTTGCTGAGCCGCTGACCATGCCTGGTTATGGAG...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CTGAAATCCCATGGAGGTGATGATAGCTACGATTTCCTCTGGAGGTTGGTTATCAGCTACGATTTCCTCTaGAGGTTGGTTATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LKSHGGDDSYDFLWRLVISYDFL*RLVIQS
Trigger: GGACTGGATAACCAACCTCCAGAGGAAATCGTAGCT...GATAACCAACCTCCAGAGGAAATCGTAGCTATCATCACCTCCATGGGATTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679768.1
ENST00000679893.1
ENST00000680905.1
ENST00000681098.1
CDS-3UTR CCA 90 bp ACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTCCCGCACCATGTAGTCTCTaGAAAATTCCATTCCAGATC +
Preference number: 4 (lower is better)
Translates to: TWSWKHPVNERLSRSSFPAPCSL*KIPFQI
Trigger: GATCTGGAATGGAATTTTCCAGAGACTACATGGTGC...GGGAAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp ATTCACTTAATTCTTCATTCAATCAGTTATTTGCTGATCACTCACCATGGGCCAGCTGATCACTCACCATaGGCCAGGCACAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: IHLILHSISYLLITHHGPADHSP*ARHSAG
Trigger: CCCAGCACTGTGCCTGGCCCATGGTGAGTGATCAGC...TGGCCCATGGTGAGTGATCAGCAAATAACTGATTGAATGAAGAATTAAGTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679769.1
3UTR CAA 72 bp AGCCAAACTTTGAGTAGTCATCGCCACATATGGCTGTaGACTGCCACATTGAATAGCACAGGTCTACCGAGT +
Preference number: 4 (lower is better)
Translates to: SQTLSSHRHIWL*TATLNSTGLPS
Trigger: ACTCGGTAGACCTGTGCTATTCAATGTGGCAGTCAACAGCCATATGTGGCGATGACTACTCAAAGTTTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp CACGTGTCTGGGTCCTGCTTTCTGTATGGAGATTTTGAGCTGAGAACTGCATCATCTGTATGGAGATTTTaGGCTGAGAACTGCATCACA +
Preference number: 4 (lower is better)
Translates to: HVSGSCFLYGDFELRTASSVWRF*AENCIT
Trigger: TGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGA...TGATGCAGTTCTCAGCTCAAAATCTCCATACAGAAAGCAGGACCCAGACACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000497380.1
ENST00000679350.1
ENST00000681128.1
CDS-3UTR TCA 90 bp ATCACCTGTTCAATGAGTTCAGATTTCACCGGAGGCTTTGAATACTGGCCTGAGTCATCACCTGTTCAATaGGTTCAGATTTCACCGGAG +
Preference number: 4 (lower is better)
Translates to: ITCSMSSDFTGGFEYWPESSPVQ*VQISPE
Trigger: CTCCGGTGAAATCTGAACTCATTGAACAGGTGATGA...CTCAGGCCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680031.1
ENST00000680436.1
ENST00000681051.1
CDS-3UTR TCA 90 bp ACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTCCCCAAGTATTCAGGGAATaGAGCAAAGCGAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: TWSWKHPVNERLSRSSFPQVFRE*SKARCF
Trigger: AAAACATCTCGCTTTGCTTCATTCCCTGAATACTTG...GGGAAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR TCA 90 bp TGGTTCAGAGAAGGCCTGAAGGCAGGCACTAAATGGTATCTTGGCACGTACCAACAAGTATTCAGGGAATaGAGCAAAGCGAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: WFREGLKAGTKWYLGTYQQVFRE*SKARCF
Trigger: AAAACATCTCGCTTTGCTTCATTCCCTGAATACTTG...TTGGTACGTGCCAAGATACCATTTAGTGCCTGCCTTCAGGCCTTCTCTGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
CDS-3UTR TCA 90 bp TGCCTGAATAGCCTGATTTCGCTGAAATCCCATGGAGGTGATGATAGCTACGATTCTGGCTCTTCCATGTaGACAATGATCCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: CLNSLISLKSHGGDDSYDSGSSM*TMIQLK
Trigger: CTTCAACTGGATCATTGTTCACATGGAAGAGCCAGA...ATCGTAGCTATCATCACCTCCATGGGATTTCAGCGAAATCAGGCTATTCAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679768.1
ENST00000679893.1
ENST00000681098.1
CDS-3UTR TCA 90 bp GGTCCTTCGGGCTTGGCCTCAGAAATAATGTTTGCATTGGCATTATTCTCCATCTCTGGCTCTTCCATGTaGACAATGATCCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: GPSGLASEIMFALALFSISGSSM*TMIQLK
Trigger: CTTCAACTGGATCATTGTTCACATGGAAGAGCCAGA...GATGGAGAATAATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681098.1
ENST00000681362.1
CDS-3UTR TCA 90 bp CTTGACTCTAGGTCCTTCGGGCTTGGCCTCAGAAATAATGTTTGCATTGGCATTGTGGATGTTCCCATGTaGCTGATGAATGCAAATAGC +
Preference number: 4 (lower is better)
Translates to: LDSRSFGLGLRNNVCIGIVDVPM*LMNANS
Trigger: GCTATTTGCATTCATCAGTCACATGGGAACATCCAC...AATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681362.1
CDS-3UTR TCA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGCTTCTCGAAGGTTCCTaGGTCATAGTTTTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMLLEGS*VIVLLK
Trigger: TTTTAACAAAACTATGACTCAGGAACCTTCGAGAAG...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTAAGCACTTTGGGAGGCTaGGGCAGGTTGAGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: VVDNFVSTYLGITALAKLSTLGG*GRLRSR
Trigger: TCTTGACCTCAACCTGCCTCAGCCTCCCAAAGTGCT...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp CATATATATGTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAATATGTACAACCTTCTaGGTCCCCCAACAGGACTCT +
Preference number: 4 (lower is better)
Translates to: HIYVQPSESPNRTLSSQAICTTF*VPQQDS
Trigger: AGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATAT...TGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATATATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
CDS-3UTR TCA 90 bp CATGCATATGAAGCATATCAATTCCAAAATGCGCTAAGTGCTTGGCCAAATGAGATCTTGGAGGAATCCTaGCTCCATTGTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HAYEAYQFQNALSAWPNEILEES*LHCPAG
Trigger: CCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGAT...CTCATTTGGCCAAGCACTTAGCGCATTTTGGAATTGATATGCTTCATATGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680276.1
CDS-3UTR GCA 90 bp GCCTCGGGCAGGTCCTTCAGAAGGCATTCCAGAACAAGGCATTGTTATCATAGGATATCAATTCCAAAATaGGCTAAGTGCTTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: ASGRSFRRHSRTRHCYHRISIPK*AKCLAK
Trigger: TTTGGCCAAGCACTTAGCGCATTTTGGAATTGATAT...CCTATGATAACAATGCCTTGTTCTGGAATGCCTTCTGAAGGACCTGCCCGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681109.1
CDS-3UTR GCA 90 bp TTGTGCTCCTCCTTCATCACCTGTTCAATGAGTTCAGATTTCACCGGAGGCTTTAATTCCTGGGCATCTTaGTGCCTGTTAGAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: LCSSFITCSMSSDFTGGFNSWAS*CLLEEN
Trigger: ATTCTCCTCTAACAGGCAGCAAGATGCCCAGGAATT...AAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGAGGAGCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR GCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTATTCATCCTTGTTGGTTaGCGCCTCCATGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: VVDNFVSTYLGITALAKLFILVG*RLHGHR
Trigger: CCTGTGGCCATGGAGGCGGCAACCAACAAGGATGAA...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGACTCCATTGTCCAGCTaGGTGAGGTTGTTGGCATAT +
Preference number: 4 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWTPLSS*VRLLAY
Trigger: ATATGCCAACAACCTCACCCAGCTGGACAATGGAGT...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGCTCGCAGGTCGCATCTaGCACACTTCCAACCACTTG +
Preference number: 4 (lower is better)
Translates to: KITDKFGALDMTPKSYHVLAGRI*HTSNHL
Trigger: CAAGTGGTTGGAAGTGTGCCAGATGCGACCTGCGAG...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp AAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATTCAACCAGAGGTTAATGCGCTAAGTGCTTaGCCAAATGAGGATCCAAAA +
Preference number: 4 (lower is better)
Translates to: KEPLSTQDRAVSQIQPEVNALSA*PNEDPK
Trigger: TTTTGGATCCTCATTTGGCCAAGCACTTAGCGCATT...AACCTCTGGTTGAATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680276.1
CDS-3UTR CCA 90 bp CATATATATGTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCATTGATGTCATTGTCCTaGAGCCCATTCTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: HIYVQPSESPNRTLSSQALMSLS*SPFSVP
Trigger: TGGGACAGAGAATGGGCTCCAGGACAATGACATCAA...TGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATATATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp AATCTTGTGTTGGATCTAAAGGCGAGTAGTCAAATATTCTGGGAAGGTTTCCTATTCGTGCCCGACTCCTaGATCACTTCCCACTCACTG +
Preference number: 4 (lower is better)
Translates to: NLVLDLKASSQIFWEGFLFVPDS*ITSHSL
Trigger: CAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAA...TAGGAAACCTTCCCAGAATATTTGACTACTCGCCTTTAGATCCAACACAAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000680605.1
ENST00000680651.1
ENST00000681649.1
CDS-3UTR CCA 90 bp GGAAGGTTTCCTACATACGCTCTCTGGAATTCTGGGATGCTGAAGATGGCCTGCAGTAGTCAAATATTCTaGGAAGGTTTCCTACATACG +
Preference number: 4 (lower is better)
Translates to: GRFPTYALWNSGMLKMACSSQIF*EGFLHT
Trigger: CGTATGTAGGAAACCTTCCCAGAATATTTGACTACT...GCAGGCCATCTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGGAAACCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000680651.1
ENST00000681649.1
CDS-3UTR CCA 90 bp AAACTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCGAGGAGAATTCCGGGTaGCTCTTGCTTACAAAGGCC +
Preference number: 4 (lower is better)
Translates to: KLESFDEVSSTILFLSKSEENSG*LLLTKA
Trigger: GGCCTTTGTAAGCAAGAGCCACCCGGAATTCTCCTC...GGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp TGTTTCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCAAAGGCAGGCACTAAATaGTATCTTGGCACGTACCAA +
Preference number: 4 (lower is better)
Translates to: CFSPNPSETITTHLELEAKAGTK*YLGTYQ
Trigger: TTGGTACGTGCCAAGATACCATTTAGTGCCTGCCTT...TGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp CTTGACTCTAGGTCCTTCGGGCTTGGCCTCAGAAATAATGTTTGCATTGGCATTATTTCCTCTGGAGGTTaGTTATCCAGTCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LDSRSFGLGLRNNVCIGIISSGG*LSSPEA
Trigger: TGCTTCTGGACTGGATAACCAACCTCCAGAGGAAAT...AATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680905.1
ENST00000681098.1
CDS-3UTR CCA 90 bp CACACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTTCTTCAAACTCAGGGTaGCTAAAGATCCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: HTWSWKHPVNERLSRSSFSSNSG*LKIQSS
Trigger: ACTGGATTGGATCTTTAGCCACCCTGAGTTTGAAGA...AAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTAAACCTGCTGGACAGGTaGGCACAGGAACAGACTCAG +
Preference number: 4 (lower is better)
Translates to: VVDNFVSTYLGITALAKLNLLDR*AQEQTQ
Trigger: CTGAGTCTGTTCCTGTGCCCACCTGTCCAGCAGGTT...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp AAACTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCGAGTTCTTGCAGGTCTaGGTCTGCTTCTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: KLESFDEVSSTILFLSKSEFLQV*VCFCSQ
Trigger: CTGACTGCAGAAGCAGACCCAGACCTGCAAGAACTC...GGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp CTCAGGGTGGCTAAAGATCCAATCCAGTGCTCTTTCCAGGTTATTATTCGTTGCAACCACACCCAAGTCTaGCTCTTCCATGTGAACAAT +
Preference number: 4 (lower is better)
Translates to: LRVAKDPIQCSFQVIIRCNHTQV*LFHVNN
Trigger: ATTGTTCACATGGAAGAGCCAGACTTGGGTGTGGTT...GCAACGAATAATAACCTGGAAAGAGCACTGGATTGGATCTTTAGCCACCCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681098.1
CDS-3UTR CCA 90 bp TTAATTCTTCATTCAATCAGTTATTTGCTGATCACTCACCATGGGCCAGGCACAGGCCAGGCACAGTGCTaGGGAAGCTACTTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: LILHSISYLLITHHGPGTGQAQC*GSYFEN
Trigger: GTTTTCAAAGTAGCTTCCCCAGCACTGTGCCTGGCC...TGTGCCTGGCCCATGGTGAGTGATCAGCAAATAACTGATTGAATGAAGAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679769.1
CDS-3UTR CCA 90 bp GCAGGCACTAAATGGTATCTTGGCACGTACCAACTCAGGAAGGGGTCTTCTGTTAGCGATCAGTTCATCTaGGTGAAAGAGCAAATCAAA +
Preference number: 4 (lower is better)
Translates to: AGTKWYLGTYQLRKGSSVSDQFI*VKEQIK
Trigger: TTTGATTTGCTCTTTCACCCAGATGAACTGATCGCT...AACAGAAGACCCCTTCCTGAGTTGGTACGTGCCAAGATACCATTTAGTGCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681560.1
3UTR CAA 72 bp GAGTCAGGATACAGACCCAGGTGCTCTCACTATGAATaGCAGGTAAGGCTCTGTTCAGGTAAAGGGAATAAA +
Preference number: 4 (lower is better)
Translates to: ESGYRPRCSHYE*QVRLCSGKGNK
Trigger: TTTATTCCCTTTACCTGAACAGAGCCTTACCTGCAATTCATAGTGAGAGCACCTGGGTCTGTATCCTGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR CAA 72 bp AGTAGTCATCGCCACATATGGCTGTTGACTGCCACATaGAATAGCACAGGTCTACCGAGTCTTATGCAAACT +
Preference number: 4 (lower is better)
Translates to: SSHRHIWLLTAT*NSTGLPSLMQT
Trigger: AGTTTGCATAAGACTCGGTAGACCTGTGCTATTCAATGTGGCAGTCAACAGCCATATGTGGCGATGACTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
3UTR CAA 72 bp GGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTaGTTGGCATATTTAGATACTGGCAATTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: GGILTPLSSWVR*LAYLDTGNSFS
Trigger: GGAAAATGAATTGCCAGTATCTAAATATGCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497380.1
ENST00000679350.1
ENST00000681128.1
3UTR CAA 72 bp CCTGGCATTCACTTAATTCTTCATTCAATCAGTTATTaGCTGATCACTCACCATGGGCCAGGCACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: PGIHLILHSISY*LITHHGPGTVL
Trigger: CAGCACTGTGCCTGGCCCATGGTGAGTGATCAGCAAATAACTGATTGAATGAAGAATTAAGTGAATGCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679769.1
3UTR CAA 72 bp ATGAAGCAAAGCGAGATGTTTTCACACCCGCAGACTTaGCTTGTAGGGCACTGCTCCAGAAATCATCAACAT +
Preference number: 4 (lower is better)
Translates to: MKQSEMFSHPQT*LVGHCSRNHQH
Trigger: ATGTTGATGATTTCTGGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGAAAACATCTCGCTTTGCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
3UTR CAA 72 bp GTTCCAGATCCATCCTTGACTCTAGGTCCTTCGGGCTaGGCCTCAGAAATAATGTTTGCATTGGCATTATTC +
Preference number: 4 (lower is better)
Translates to: VPDPSLTLGPSG*ASEIMFALALF
Trigger: GAATAATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAAGGATGGATCTGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681362.1
CDS-3UTR TCA 90 bp CTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTCTCATCACCTGTTCAATaGGTTCAGATTTCACCGGAG +
Preference number: 4 (lower is better)
Translates to: LESFDEVSSTILFLSKSLSSPVQ*VQISPE
Trigger: CTCCGGTGAAATCTGAACTCATTGAACAGGTGATGA...GAGGGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR TCA 90 bp TTGCAGAGGCTCTATTATGGACAGAGCATAATATCTACATGGATACATCAGAAAATCGCTTGGGTTTTCTaGGCCGATGCGGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LQRLYYGQSIISTWIHQKIAWVF*ADAVPL
Trigger: GAGAGGAACCGCATCGGCTCAGAAAACCCAAGCGAT...TTTCTGATGTATCCATGTAGATATTATGCTCTGTCCATAATAGAGCCTCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp TTCAGAGAAGGCCTGAAGGCAGGCACTAAATGGTATCTTGGCACGTACCAACTCAGTCAAGACCAAAAGTaGACTTCTTTATCTGCACTA +
Preference number: 4 (lower is better)
Translates to: FREGLKAGTKWYLGTYQLSQDQK*TSLSAL
Trigger: TAGTGCAGATAAAGAAGTTCACTTTTGGTCTTGACT...GAGTTGGTACGTGCCAAGATACCATTTAGTGCCTGCCTTCAGGCCTTCTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
CDS-3UTR TCA 90 bp TTGACTCTAGGTCCTTCGGGCTTGGCCTCAGAAATAATGTTTGCATTGGCATTATCTGGCTCTTCCATGTaGACAATGATCCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LTLGPSGLASEIMFALALSGSSM*TMIQLK
Trigger: CTTCAACTGGATCATTGTTCACATGGAAGAGCCAGA...TAATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681098.1
ENST00000681362.1
CDS-3UTR TCA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGTCACACCCAGAATCCTaGTTGTTCACAACTCACTAC +
Preference number: 4 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWSHPES*LFTTHY
Trigger: GTAGTGAGTTGTGAACAATCAGGATTCTGGGTGTGA...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTAAAAAGTACTGCACCGTaGGCTCCCTCCTTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: VVDNFVSTYLGITALAKLKSTAP*APSFCQ
Trigger: TTGGCAGAAGGAGGGAGCTCACGGTGCAGTACTTTT...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp AAACTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCGCAGGTCTGGGTCTATaGGAGAAAACTGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: KLESFDEVSSTILFLSKSAGLGL*EKTASA
Trigger: TGCAGAAGCAGTTTTCTCTCATAGACCCAGACCTGC...GGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602704.2
CDS-3UTR TCA 90 bp AAACTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCGCTGGAAGCACCCAGTaGATGAGAGGCTTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: KLESFDEVSSTILFLSKSAGSTQ*MRGFQD
Trigger: ATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGC...GGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
CDS-3UTR GCA 90 bp TGTTTCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCAAAAAGAATAAACATCTaGCCCGTCAGGAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: CFSPNPSETITTHLELEAKRINI*PVRSDG
Trigger: ACCATCACTCCTGACGGGGCAGATGTTTATTCTTTT...TGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp GCTGTCAAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATTCAACCAATATCAATTCCAAAATaGGCTAAGTGCTTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: AVKEPLSTQDRAVSQIQPISIPK*AKCLAK
Trigger: TTTGGCCAAGCACTTAGCGCATTTTGGAATTGATAT...TGGTTGAATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTGACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680276.1
CDS-3UTR GCA 90 bp AGAAGGCCATGTCCTAACTTAGTCATCTGTGTGTTGAAATCTTGTGTTGGATCTTTCTGCTGTGGCTTGTaGTCCTCCTTCATCACCTGT +
Preference number: 4 (lower is better)
Translates to: RRPCPNLVICVLKSCVGSFCCGL*SSFITC
Trigger: ACAGGTGATGAAGGAGGAGCACAAGCCACAGCAGAA...AGATCCAACACAAGATTTCAACACACAGATGACTAAGTTAGGACATGGCCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR GCA 90 bp CATATATATGTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAAATTCCTGGGCATCTTaGTGCCTGTTAGAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: HIYVQPSESPNRTLSSQANSWAS*CLLEEN
Trigger: ATTCTCCTCTAACAGGCAGCAAGATGCCCAGGAATT...TGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATATATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp CTGAAATCCCATGGAGGTGATGATAGCTACGATTTCCTCTGGAGGTTGGTTATCTTGCTTGTAGGGCACTaGTCCAGAAATCATCAACAT +
Preference number: 4 (lower is better)
Translates to: LKSHGGDDSYDFLWRLVILLVGH*SRNHQH
Trigger: ATGTTGATGATTTCTGGAGCAGTGCCCTACAAGCAA...GATAACCAACCTCCAGAGGAAATCGTAGCTATCATCACCTCCATGGGATTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR GCA 90 bp ACTCAGGAAGGGGTCTTCTGTTTGCTTCTGCTTCCCTTCTCGTTAGTTCATAAGTTGCTTGTAGGGCACTaGTCCAGAAATCATCAACAT +
Preference number: 4 (lower is better)
Translates to: TQEGVFCLLLLPFSLVHKLLVGH*SRNHQH
Trigger: ATGTTGATGATTTCTGGAGCAGTGCCCTACAAGCAA...CTTATGAACTAACGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTCCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
CDS-3UTR GCA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGCTAACCCAATGTCTGTaGTTTGTTTCACCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWLTQCL*FVSPGW
Trigger: CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAG...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGACACTTCCAACCACTTaGAGGAATCCTGACTCCATT +
Preference number: 4 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWTLPTT*RNPDSI
Trigger: AATGGAGTCAGGATTCCTCCAAGTGGTTGGAAGTGT...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp TGTTTCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCAAATGCGCTAAGTGCTTaGCCAAATGAGGATCCAAAA +
Preference number: 4 (lower is better)
Translates to: CFSPNPSETITTHLELEANALSA*PNEDPK
Trigger: TTTTGGATCCTCATTTGGCCAAGCACTTAGCGCATT...TGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp TCCTTCATCACCTGTTCAATGAGTTCAGATTTCACCGGAGGCTTTGAATACTGGTGCAAGAAGAATTCCTaGGCATCTTGCTGCCTGTTA +
Preference number: 4 (lower is better)
Translates to: SFITCSMSSDFTGGFEYWCKKNS*ASCCLL
Trigger: TAACAGGCAGCAAGATGCCCAGGAATTCTTCTTGCA...CCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR CCA 90 bp CTGAATAGCCTGATTTCGCTGAAATCCCATGGAGGTGATGATAGCTACGATTTCAAGGCAGGCACTAAATaGTATCTTGGCACGTACCAA +
Preference number: 4 (lower is better)
Translates to: LNSLISLKSHGGDDSYDFKAGTK*YLGTYQ
Trigger: TTGGTACGTGCCAAGATACCATTTAGTGCCTGCCTT...GAAATCGTAGCTATCATCACCTCCATGGGATTTCAGCGAAATCAGGCTATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR CCA 90 bp CACACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTGATGGGTCTATCAATTaGTTCATCAGGCGATCTTTT +
Preference number: 4 (lower is better)
Translates to: HTWSWKHPVNERLSRSSFDGSIN*FIRRSF
Trigger: AAAAGATCGCCTGATGAACCAATTGATAGACCCATC...AAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp CTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTCATTTCCTCTGGAGGTTaGTTATCCAGTCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LESFDEVSSTILFLSKSLISSGG*LSSPEA
Trigger: TGCTTCTGGACTGGATAACCAACCTCCAGAGGAAAT...GAGGGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp CACAAAATCACTGTCTTCTTCAAACTCAGGGTGGCTAAAGATCCAATCCAGTGCATTTCCTCTGGAGGTTaGTTATCCAGTCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: HKITVFFKLRVAKDPIQCISSGG*LSSPEA
Trigger: TGCTTCTGGACTGGATAACCAACCTCCAGAGGAAAT...GCACTGGATTGGATCTTTAGCCACCCTGAGTTTGAAGAAGACAGTGATTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680905.1
ENST00000681098.1
CDS-3UTR CCA 90 bp GTCTTCTTCAAACTCAGGGTGGCTAAAGATCCAATCCAGTGCTCTTTCCAGGTTTCTTCAAACTCAGGGTaGCTAAAGATCCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: VFFKLRVAKDPIQCSFQVSSNSG*LKIQSS
Trigger: ACTGGATTGGATCTTTAGCCACCCTGAGTTTGAAGA...AACCTGGAAAGAGCACTGGATTGGATCTTTAGCCACCCTGAGTTTGAAGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680905.1
ENST00000681098.1
ENST00000681362.1
CDS-3UTR CCA 90 bp CTTGACTCTAGGTCCTTCGGGCTTGGCCTCAGAAATAATGTTTGCATTGGCATTTCTTCAAACTCAGGGTaGCTAAAGATCCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: LDSRSFGLGLRNNVCIGISSNSG*LKIQSS
Trigger: ACTGGATTGGATCTTTAGCCACCCTGAGTTTGAAGA...AATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680905.1
ENST00000681098.1
ENST00000681362.1
CDS-3UTR CCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTAACTGTACTCCAGCCTTaGCAACACAGCGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: VVDNFVSTYLGITALAKLTVLQP*QHSETP
Trigger: TGGAGTCTCGCTGTGTTGCCAAGGCTGGAGTACAGT...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTCGAGTTCTTGCAGGTCTaGGTCTATGAGAGAAAACTG +
Preference number: 4 (lower is better)
Translates to: LESFDEVSSTILFLSKSLEFLQV*VYERKL
Trigger: CAGTTTTCTCTCATAGACCCAGACCTGCAAGAACTC...GAGGGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602704.2
CDS-3UTR CCA 90 bp GCAAAATGTCCTGAAGCAATAAAGATGGGCTTCGCAGCGCACACTGAGTGGACTAGTAGTCAAATATTCTaGGAAGGTTTCCTACATACC +
Preference number: 4 (lower is better)
Translates to: AKCPEAIKMGFAAHTEWTSSQIF*EGFLHT
Trigger: GGTATGTAGGAAACCTTCCCAGAATATTTGACTACT...AGTCCACTCAGTGTGCGCTGCGAAGCCCATCTTTATTGCTTCAGGACATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS-3UTR TCA 90 bp ACACCCGCAGACTTTGCTTGTAGGGCACTGCTCCAGAAATCATCAACATTTTCTCAAGTATTCAGGGAATaGAGCAAAGCGAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: TPADFACRALLQKSSTFSQVFRE*SKARCF
Trigger: AAAACATCTCGCTTTGCTTCATTCCCTGAATACTTG...AGAAAATGTTGATGATTTCTGGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
CDS-3UTR TCA 90 bp AATGAAGCAAAGCGAGATGTTTTCACACCCGCAGACTTTGCTTGTAGGGCACTGAGTCAAGACCAAAAGTaGACTTCTTTATCTGCACTA +
Preference number: 4 (lower is better)
Translates to: NEAKRDVFTPADFACRALSQDQK*TSLSAL
Trigger: TAGTGCAGATAAAGAAGTTCACTTTTGGTCTTGACT...CAGTGCCCTACAAGCAAAGTCTGCGGGTGTGAAAACATCTCGCTTTGCTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
CDS-3UTR TCA 90 bp TCACTTAATTCTTCATTCAATCAGTTATTTGCTGATCACTCACCATGGGCCAGGCAATCAGTTATTTGCTaGTCACTCACCATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SLNSSFNQLFADHSPWARQSVIC*SLTMGQ
Trigger: CTGGCCCATGGTGAGTGATCAGCAAATAACTGATTG...CCTGGCCCATGGTGAGTGATCAGCAAATAACTGATTGAATGAAGAATTAAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679769.1
CDS-3UTR TCA 90 bp TCAAACTCAGGGTGGCTAAAGATCCAATCCAGTGCTCTTTCCAGGTTATTATTCACTGGCTCTTCCATGTaGACAATGATCCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SNSGWLKIQSSALSRLLFTGSSM*TMIQLK
Trigger: CTTCAACTGGATCATTGTTCACATGGAAGAGCCAGT...GAATAATAACCTGGAAAGAGCACTGGATTGGATCTTTAGCCACCCTGAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680905.1
CDS-3UTR GCA 90 bp ACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTCCCCCAAAAATGTATTCATaGATACATAGAGTCCACCTT +
Preference number: 4 (lower is better)
Translates to: TWSWKHPVNERLSRSSFPPKMYS*IHRVHL
Trigger: AAGGTGGACTCTATGTATGCATGAATACATTTTTGG...GGGAAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp AAACTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCGGTTTTCTGAGCCGATaGGGTTCCTCTCTACTAGAT +
Preference number: 4 (lower is better)
Translates to: KLESFDEVSSTILFLSKSGFLSR*GSSLLD
Trigger: ATCTAGTAGAGAGGAACCGCATCGGCTCAGAAAACC...GGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp CATATATATGTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCATTGCTTGTAGGGCACTaGTCCAGAAATCATCAACAT +
Preference number: 4 (lower is better)
Translates to: HIYVQPSESPNRTLSSQALLVGH*SRNHQH
Trigger: ATGTTGATGATTTCTGGAGCAGTGCCCTACAAGCAA...TGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATATATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp CTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTCAGAGAAAACTGCTTCTaGAGTCAGTCTGTTGCGATA +
Preference number: 4 (lower is better)
Translates to: LESFDEVSSTILFLSKSLRENCF*SQSVAI
Trigger: TATCGCAACAGACTGACTGCAGAAGCAGTTTTCTCT...GAGGGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602704.2
CDS-3UTR CCA 90 bp TCCTTCATCACCTGTTCAATGAGTTCAGATTTCACCGGAGGCTTTGAATACTGGAATGCGCTAAGTGCTTaGCCAAATGAGGATCCAAAA +
Preference number: 4 (lower is better)
Translates to: SFITCSMSSDFTGGFEYWNALSA*PNEDPK
Trigger: TTTTGGATCCTCATTTGGCCAAGCACTTAGCGCATT...CCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680031.1
CDS-3UTR CCA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGCCCCTGGCTCGGAGATaGTTGATATCAAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: KITDKFGALDMTPKSYHVPLARR*LISSRS
Trigger: AGACCTACTTGATATCAACCATCTCCGAGCCAGGGG...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp TTGCAGAGGCTCTATTATGGACAGAGCATAATATCTACATGGATACATCAGAAATCGAGCTATCCCCGCTaGACTTCCTATAGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LQRLYYGQSIISTWIHQKSSYPR*TSYSPK
Trigger: CTTTGGGCTATAGGAAGTCCAGCGGGGATAGCTCGA...TTTCTGATGTATCCATGTAGATATTATGCTCTGTCCATAATAGAGCCTCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp TTGCAGAGGCTCTATTATGGACAGAGCATAATATCTACATGGATACATCAGAAAACTGTACTCCAGCCTTaGCAACACAGCGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: LQRLYYGQSIISTWIHQKTVLQP*QHSETP
Trigger: TGGAGTCTCGCTGTGTTGCCAAGGCTGGAGTACAGT...TTTCTGATGTATCCATGTAGATATTATGCTCTGTCCATAATAGAGCCTCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp TTGACTCTAGGTCCTTCGGGCTTGGCCTCAGAAATAATGTTTGCATTGGCATTAGTCCTGAAACAACACTaGCTCTTCCATGTGAACAAT +
Preference number: 4 (lower is better)
Translates to: LTLGPSGLASEIMFALALVLKQH*LFHVNN
Trigger: ATTGTTCACATGGAAGAGCCAGTGTTGTTTCAGGAC...TAATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680905.1
CDS-3UTR CCA 90 bp CTGTCTTCTTCAAACTCAGGGTGGCTAAAGATCCAATCCAGTGCTCTTTCCAGGTCCAGGTTATTATTCTaGCTCTTCCATGTGAACAAT +
Preference number: 4 (lower is better)
Translates to: LSSSNSGWLKIQSSALSRSRLLF*LFHVNN
Trigger: ATTGTTCACATGGAAGAGCCAGAATAATAACCTGGA...CCTGGAAAGAGCACTGGATTGGATCTTTAGCCACCCTGAGTTTGAAGAAGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681362.1
3UTR CAA 72 bp TACTACAACCCACCATGGCATACCACATTCTACTCATaGAAGGTTCACTGTAACCAATCTCACTGTATCCTC +
Preference number: 4 (lower is better)
Translates to: YYNPPWHTTFYS*KVHCNQSHCIL
Trigger: GAGGATACAGTGAGATTGGTTACAGTGAACCTTCAATGAGTAGAATGTGGTATGCCATGGTGGGTTGTAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp AAACTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCAAGTGCTTGGCCAAATaGGGATCCAAAACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: KLESFDEVSSTILFLSKSKCLAK*GSKTGS
Trigger: AGAACCTGTTTTGGATCCTCATTTGGCCAAGCACTT...GGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR TCA 90 bp TCCCATGCATATGAAGCATATCAATTCCAAAATGCGCTAAGTGCTTGGCCAAATAAGTGCTTGGCCAAATaGGGATCCAAAACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SHAYEAYQFQNALSAWPNKCLAK*GSKTGS
Trigger: AGAACCTGTTTTGGATCCTCATTTGGCCAAGCACTT...ATTTGGCCAAGCACTTAGCGCATTTTGGAATTGATATGCTTCATATGCATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680055.1
CDS-3UTR TCA 90 bp CATGCATATGAAGCATATCAATTCCAAAATGCGCTAAGTGCTTGGCCAAATGAGAAGTGCTTGGCCAAATaGGGATCCAAAACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: HAYEAYQFQNALSAWPNEKCLAK*GSKTGS
Trigger: AGAACCTGTTTTGGATCCTCATTTGGCCAAGCACTT...CTCATTTGGCCAAGCACTTAGCGCATTTTGGAATTGATATGCTTCATATGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000680055.1
ENST00000680276.1
ENST00000681109.1
CDS-3UTR TCA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGCAAGTATTCAGGGAATaGAGCAAAGCGAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWQVFRE*SKARCF
Trigger: AAAACATCTCGCTTTGCTTCATTCCCTGAATACTTG...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp TCACTTAATTCTTCATTCAATCAGTTATTTGCTGATCACTCACCATGGGCCAGGGTGGATGTTCCCATGTaGCTGATGAATGCAAATAGC +
Preference number: 4 (lower is better)
Translates to: SLNSSFNQLFADHSPWARVDVPM*LMNANS
Trigger: GCTATTTGCATTCATCAGTCACATGGGAACATCCAC...CCTGGCCCATGGTGAGTGATCAGCAAATAACTGATTGAATGAAGAATTAAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679769.1
CDS-3UTR TCA 90 bp AAACTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTCTCCAAATCCCTCTaGAACCATTACCACACACTT +
Preference number: 4 (lower is better)
Translates to: KLESFDEVSSTILFLSKSLSKSL*NHYHTL
Trigger: AAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAG...GGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
CDS-3UTR GCA 90 bp AAACGAAAAACATCGCTTGGGTTTTCTGAGCCGATGCGGTTCCTCTCTACTAGAATATCAATTCCAAAATaGGCTAAGTGCTTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: KRKTSLGFSEPMRFLSTRISIPK*AKCLAK
Trigger: TTTGGCCAAGCACTTAGCGCATTTTGGAATTGATAT...TCTAGTAGAGAGGAACCGCATCGGCTCAGAAAACCCAAGCGATGTTTTTCGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680031.1
CDS-3UTR GCA 90 bp TTGCAGAGGCTCTATTATGGACAGAGCATAATATCTACATGGATACATCAGAAATTGGCTTCAGTTTCGTaGCCGACTCCTGGATCACTT +
Preference number: 4 (lower is better)
Translates to: LQRLYYGQSIISTWIHQKLASVS*PTPGSL
Trigger: AAGTGATCCAGGAGTCGGGCACGAAACTGAAGCCAA...TTTCTGATGTATCCATGTAGATATTATGCTCTGTCCATAATAGAGCCTCTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTAGGTTTTCTGAGCCGATaGGGTTCCTCTCTACTAGAT +
Preference number: 4 (lower is better)
Translates to: VVDNFVSTYLGITALAKLGFLSR*GSSLLD
Trigger: ATCTAGTAGAGAGGAACCGCATCGGCTCAGAAAACC...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGACTCCATTGTCCAGCTaGGTGAGGTTGTTGGCATAT +
Preference number: 4 (lower is better)
Translates to: KITDKFGALDMTPKSYHVTPLSS*VRLLAY
Trigger: ATATGCCAACAACCTCACCCAGCTGGACAATGGAGT...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp TTCCAACCACATCTCTATTTTTACAAACGGAGAAATGGAGGTCCAGAAGTAACTACTCCATTGTCCAGCTaGGTGAGGTTGTTGGCATAT +
Preference number: 4 (lower is better)
Translates to: FQPHLYFYKRRNGGPEVTTPLSS*VRLLAY
Trigger: ATATGCCAACAACCTCACCCAGCTGGACAATGGAGT...AGTTACTTCTGGACCTCCATTTCTCCGTTTGTAAAAATAGAGATGTGGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681299.1
CDS-3UTR CCA 90 bp TTCTTCTTGAAAAGAATAAACATAACAGCCTCGGGCAGGTCCTTCAGAAGGCATAATGCGCTAAGTGCTTaGCCAAATGAGGATCCAAAA +
Preference number: 4 (lower is better)
Translates to: FFLKRINITASGRSFRRHNALSA*PNEDPK
Trigger: TTTTGGATCCTCATTTGGCCAAGCACTTAGCGCATT...ATGCCTTCTGAAGGACCTGCCCGAGGCTGTTATGTTTATTCTTTTCAAGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681109.1
CDS-3UTR CCA 90 bp GTGTTGGATCTAAAGGCGAGTAGTCAAATATTCTGGGAAGGTTTCCTACATACGAATGCGCTAAGTGCTTaGCCAAATGAGGATCCAAAA +
Preference number: 4 (lower is better)
Translates to: VLDLKASSQIFWEGFLHTNALSA*PNEDPK
Trigger: TTTTGGATCCTCATTTGGCCAAGCACTTAGCGCATT...CGTATGTAGGAAACCTTCCCAGAATATTTGACTACTCGCCTTTAGATCCAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000681649.1
CDS-3UTR CCA 90 bp AACGAAAAACATCGCTTGGGTTTTCTGAGCCGATGCGGTTCCTCTCTACTAGATAGTAGTCAAATATTCTaGGAAGGTTTCCTACATACG +
Preference number: 4 (lower is better)
Translates to: NEKHRLGFLSRCGSSLLDSSQIF*EGFLHT
Trigger: CGTATGTAGGAAACCTTCCCAGAATATTTGACTACT...ATCTAGTAGAGAGGAACCGCATCGGCTCAGAAAACCCAAGCGATGTTTTTCGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681051.1
CDS-3UTR CCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTAAGCTACGATTTCCTCTaGAGGTTGGTTATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: VVDNFVSTYLGITALAKLSYDFL*RLVIQS
Trigger: GGACTGGATAACCAACCTCCAGAGGAAATCGTAGCT...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CTTAATTCTTCATTCAATCAGTTATTTGCTGATCACTCACCATGGGCCAGGCACTCTTCAAACTCAGGGTaGCTAAAGATCCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: LNSSFNQLFADHSPWARHSSNSG*LKIQSS
Trigger: ACTGGATTGGATCTTTAGCCACCCTGAGTTTGAAGA...GTGCCTGGCCCATGGTGAGTGATCAGCAAATAACTGATTGAATGAAGAATTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679769.1
CDS-3UTR CCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTAGCCCAAAGTAAGCACTaGGAAATGTCAGGCACATTC +
Preference number: 4 (lower is better)
Translates to: VVDNFVSTYLGITALAKLAQSKH*EMSGTF
Trigger: GAATGTGCCTGACATTTCCCAGTGCTTACTTTGGGC...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp TTGTGCTCCTCCTTCATCACCTGTTCAATGAGTTCAGATTTCACCGGAGGCTTTAGTAGTCAAATATTCTaGGAAGGTTTCCTACATACC +
Preference number: 4 (lower is better)
Translates to: LCSSFITCSMSSDFTGGFSSQIF*EGFLHT
Trigger: GGTATGTAGGAAACCTTCCCAGAATATTTGACTACT...AAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGAGGAGCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000680436.1
CDS-3UTR TCA 90 bp AAACTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCTCTGTATGGAGATTTTaGGCTGAGAACTGCATCACA +
Preference number: 4 (lower is better)
Translates to: KLESFDEVSSTILFLSKSSVWRF*AENCIT
Trigger: TGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGA...GGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR TCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTAAAGTGCTTGGCCAAATaGGGATCCAAAACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: VVDNFVSTYLGITALAKLKCLAK*GSKTGS
Trigger: AGAACCTGTTTTGGATCCTCATTTGGCCAAGCACTT...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGTCTGTCCCATGCATATaGAGCATATCAATTCCAAAA +
Preference number: 4 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWSVPCI*SISIPK
Trigger: TTTTGGAATTGATATGCTTCATATGCATGGGACAGA...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp TTGCAGAGGCTCTATTATGGACAGAGCATAATATCTACATGGATACATCAGAAAAGAGGCCACTATCACTaGCCCCCAAAGCAAAATAGA +
Preference number: 4 (lower is better)
Translates to: LQRLYYGQSIISTWIHQKRGHYH*PPKQNR
Trigger: TCTATTTTGCTTTGGGGGTCAGTGATAGTGGCCTCT...TTTCTGATGTATCCATGTAGATATTATGCTCTGTCCATAATAGAGCCTCTGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGCATTTGTTCCCAAATTaGGGAAAACAGAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWHLFPN*GKQRRK
Trigger: TTTTCTCCTCTGTTTTCCTCAATTTGGGAACAAATG...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGGGAGTCATTATTCTATaGCACTCACTCTGCCCTAAG +
Preference number: 4 (lower is better)
Translates to: KITDKFGALDMTPKSYHVGVIIL*HSLCPK
Trigger: CTTAGGGCAGAGTGAGTGTCATAGAATAATGACTCC...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp TTCATCACCTGTTCAATGAGTTCAGATTTCACCGGAGGCTTTGAATACTGGCCTCATACCCCATGCATATaGAGCATATCAATTCCAAAA +
Preference number: 4 (lower is better)
Translates to: FITCSMSSDFTGGFEYWPHTPCI*SISIPK
Trigger: TTTTGGAATTGATATGCTTCATATGCATGGGGTATG...AGGCCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680031.1
CDS-3UTR GCA 90 bp TTGGCATATTTAGATACTGGCAATTCATTTTCCCACGTGTCTGGGTCCTGCTTTACATGTCTTTTCAGGTaGATGTATACACTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LAYLDTGNSFSHVSGSCFTCLFR*MYTLCP
Trigger: TGGACAGAGTGTATACATGCACCTGAAAAGACATGT...AAAGCAGGACCCAGACACGTGGGAAAATGAATTGCCAGTATCTAAATATGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497380.1
CDS-3UTR GCA 90 bp CTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTCATATCAATTCCAAAATaGGCTAAGTGCTTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: LESFDEVSSTILFLSKSLISIPK*AKCLAK
Trigger: TTTGGCCAAGCACTTAGCGCATTTTGGAATTGATAT...GAGGGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp GGTCCTTCGGGCTTGGCCTCAGAAATAATGTTTGCATTGGCATTATTCTCCATCAAAGATCCAATCCAGTaGTCTTTCCAGGTTATTATT +
Preference number: 4 (lower is better)
Translates to: GPSGLASEIMFALALFSIKDPIQ*SFQVII
Trigger: AATAATAACCTGGAAAGAGCACTGGATTGGATCTTT...GATGGAGAATAATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680905.1
ENST00000681098.1
ENST00000681362.1
CDS-3UTR CCA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGAGTAGTCAAATATTCTaGGAAGGTTTCCTACATACG +
Preference number: 4 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWSSQIF*EGFLHT
Trigger: CGTATGTAGGAAACCTTCCCAGAATATTTGACTACT...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTCAGTAGTCAAATATTCTaGGAAGGTTTCCTACATACG +
Preference number: 4 (lower is better)
Translates to: LESFDEVSSTILFLSKSLSSQIF*EGFLHT
Trigger: CGTATGTAGGAAACCTTCCCAGAATATTTGACTACT...GAGGGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTAAAGGCAGGCACTAAATaGTATCTTGGCACGTACCAA +
Preference number: 4 (lower is better)
Translates to: VVDNFVSTYLGITALAKLKAGTK*YLGTYQ
Trigger: TTGGTACGTGCCAAGATACCATTTAGTGCCTGCCTT...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTAATTTCCTCTGGAGGTTaGTTATCCAGTCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: VVDNFVSTYLGITALAKLISSGG*LSSPEA
Trigger: TGCTTCTGGACTGGATAACCAACCTCCAGAGGAAAT...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp TTCAAACTCAGGGTGGCTAAAGATCCAATCCAGTGCTCTTTCCAGGTTATTATTTCTTCAAACTCAGGGTaGCTAAAGATCCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: FKLRVAKDPIQCSFQVIISSNSG*LKIQSS
Trigger: ACTGGATTGGATCTTTAGCCACCCTGAGTTTGAAGA...AATAATAACCTGGAAAGAGCACTGGATTGGATCTTTAGCCACCCTGAGTTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680905.1
ENST00000681098.1
CDS-3UTR CCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTAACTGGCCACATTATTTaGTTTCTCCAGAGGCCACTA +
Preference number: 4 (lower is better)
Translates to: VVDNFVSTYLGITALAKLTGHII*FLQRPL
Trigger: TAGTGGCCTCTGGAGAAACCAAATAATGTGGCCAGT...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp TTGCAGAGGCTCTATTATGGACAGAGCATAATATCTACATGGATACATCAGAAATGTCTCTCGGTCACATaGCACCAAAGGATCACCTAT +
Preference number: 4 (lower is better)
Translates to: LQRLYYGQSIISTWIHQKCLSVT*HQRITY
Trigger: ATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACA...TTTCTGATGTATCCATGTAGATATTATGCTCTGTCCATAATAGAGCCTCTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp TGTTTCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCATTTAGACTATCTTTATaGGGGGACAATAAAAACTGG +
Preference number: 4 (lower is better)
Translates to: CFSPNPSETITTHLELEAFRLSL*GDNKNW
Trigger: CCAGTTTTTATTGTCCCCCCATAAAGATAGTCTAAA...TGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
CDS-3UTR CCA 90 bp TCCTTCATCACCTGTTCAATGAGTTCAGATTTCACCGGAGGCTTTGAATACTGGAGTAGTCAAATATTCTaGGAAGGTTTCCTACATACC +
Preference number: 4 (lower is better)
Translates to: SFITCSMSSDFTGGFEYWSSQIF*EGFLHT
Trigger: GGTATGTAGGAAACCTTCCCAGAATATTTGACTACT...CCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000680436.1
CDS-3UTR CCA 90 bp AATCTTGTGTTGGATCTAAAGGCGAGTAGTCAAATATTCTGGGAAGGTTTCCTAAGGCCAGAGAAAAGGTaGCAAAATGTCCTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: NLVLDLKASSQIFWEGFLRPEKR*QNVLKQ
Trigger: TTGCTTCAGGACATTTTGCCACCTTTTCTCTGGCCT...TAGGAAACCTTCCCAGAATATTTGACTACTCGCCTTTAGATCCAACACAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS-3UTR TCA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGATGGAGATTTTGAGCTaGGAACTGCATCACAAGCAA +
Preference number: 4 (lower is better)
Translates to: KITDKFGALDMTPKSYHVMEILS*ELHHKQ
Trigger: TTGCTTGTGATGCAGTTCTCAGCTCAAAATCTCCAT...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp GTGTTGGATCTAAAGGCGAGTAGTCAAATATTCTGGGAAGGTTTCCTACATACGTCTGTCCCATGCATATaGAGCATATCAATTCCAAAA +
Preference number: 4 (lower is better)
Translates to: VLDLKASSQIFWEGFLHTSVPCI*SISIPK
Trigger: TTTTGGAATTGATATGCTTCATATGCATGGGACAGA...CGTATGTAGGAAACCTTCCCAGAATATTTGACTACTCGCCTTTAGATCCAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679783.1
CDS-3UTR TCA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGCAAATTTGGGGCACTTaGCATGACTCCAAAGAGTTA +
Preference number: 4 (lower is better)
Translates to: KITDKFGALDMTPKSYHVQIWGT*HDSKEL
Trigger: TAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTG...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp TATGAAGCATATCAATTCCAAAATGCGCTAAGTGCTTGGCCAAATGAGGATCCATGTTATCATAGGAGATaGCAGGTCCATGCATGTTAT +
Preference number: 4 (lower is better)
Translates to: YEAYQFQNALSAWPNEDPCYHRR*QVHACY
Trigger: ATAACATGCATGGACCTGTCATCTCCTATGATAACA...TGGATCCTCATTTGGCCAAGCACTTAGCGCATTTTGGAATTGATATGCTTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681109.1
CDS-3UTR TCA 90 bp CATTCACTTAATTCTTCATTCAATCAGTTATTTGCTGATCACTCACCATGGGCCCTGGGGAAGCTACTTTaGAAACATTTGTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: HSLNSSFNQLFADHSPWALGKLL*KHLWFC
Trigger: ACAGAACCACAAATGTTTTCAAAGTAGCTTCCCCAG...GGCCCATGGTGAGTGATCAGCAAATAACTGATTGAATGAAGAATTAAGTGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679769.1
CDS-3UTR GCA 90 bp AAACTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCACATGTCTTTTCAGGTaGATGTATACACTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: KLESFDEVSSTILFLSKSTCLFR*MYTLCP
Trigger: TGGACAGAGTGTATACATGCACCTGAAAAGACATGT...GGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR GCA 90 bp GTGTTGGATCTAAAGGCGAGTAGTCAAATATTCTGGGAAGGTTTCCTACATACGATATCAATTCCAAAATaGGCTAAGTGCTTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: VLDLKASSQIFWEGFLHTISIPK*AKCLAK
Trigger: TTTGGCCAAGCACTTAGCGCATTTTGGAATTGATAT...CGTATGTAGGAAACCTTCCCAGAATATTTGACTACTCGCCTTTAGATCCAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000681649.1
CDS-3UTR GCA 90 bp ATCACTGTCTTCTTCAAACTCAGGGTGGCTAAAGATCCAATCCAGTGCTCTTTCAAAGATCCAATCCAGTaGTCTTTCCAGGTTATTATT +
Preference number: 4 (lower is better)
Translates to: ITVFFKLRVAKDPIQCSFKDPIQ*SFQVII
Trigger: AATAATAACCTGGAAAGAGCACTGGATTGGATCTTT...GAAAGAGCACTGGATTGGATCTTTAGCCACCCTGAGTTTGAAGAAGACAGTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680905.1
ENST00000681098.1
ENST00000681362.1
CDS-3UTR CCA 90 bp GTGTTGGATCTAAAGGCGAGTAGTCAAATATTCTGGGAAGGTTTCCTACATACGAGTAGTCAAATATTCTaGGAAGGTTTCCTACATACG +
Preference number: 4 (lower is better)
Translates to: VLDLKASSQIFWEGFLHTSSQIF*EGFLHT
Trigger: CGTATGTAGGAAACCTTCCCAGAATATTTGACTACT...CGTATGTAGGAAACCTTCCCAGAATATTTGACTACTCGCCTTTAGATCCAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000680651.1
ENST00000681649.1
CDS-3UTR CCA 90 bp TTGCAGAGGCTCTATTATGGACAGAGCATAATATCTACATGGATACATCAGAAACGGCTCAGCAAAATCTaGCTCTTCCATGTGAACAAT +
Preference number: 4 (lower is better)
Translates to: LQRLYYGQSIISTWIHQKRLSKI*LFHVNN
Trigger: ATTGTTCACATGGAAGAGCCAGATTTTGCTGAGCCG...TTTCTGATGTATCCATGTAGATATTATGCTCTGTCCATAATAGAGCCTCTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGTCTTCAAACTCAGGGTaGCTAAAGATCCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: KITDKFGALDMTPKSYHVSSNSG*LKIQSS
Trigger: ACTGGATTGGATCTTTAGCCACCCTGAGTTTGAAGA...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTACCAAGATCACACTGTTaGTCACATCAGACAAGCAAT +
Preference number: 4 (lower is better)
Translates to: VVDNFVSTYLGITALAKLPRSHC*SHQTSN
Trigger: ATTGCTTGTCTGATGTGACCAACAGTGTGATCTTGG...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGTACTACAACCCACCATaGCATACCACATTCTACTCA +
Preference number: 4 (lower is better)
Translates to: KITDKFGALDMTPKSYHVYYNPP*HTTFYS
Trigger: TGAGTAGAATGTGGTATGCCATGGTGGGTTGTAGTA...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp CATATATATGTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCATTTAGACTATCTTTATaGGGGGACAATAAAAACTGG +
Preference number: 4 (lower is better)
Translates to: HIYVQPSESPNRTLSSQAFRLSL*GDNKNW
Trigger: CCAGTTTTTATTGTCCCCCCATAAAGATAGTCTAAA...TGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATATATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
CDS-3UTR TCA 90 bp GTGATCTGGGAATATAACAAGTTTGGCTTCATCTTCATATTCATAATCGTCGCTTCTGTATGGAGATTTTaGGCTGAGAACTGCATCACA +
Preference number: 4 (lower is better)
Translates to: VIWEYNKFGFIFIFIIVASVWRF*AENCIT
Trigger: TGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGA...AGCGACGATTATGAATATGAAGATGAAGCCAAACTTGTTATATTCCCAGATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497380.1
ENST00000679350.1
CDS-3UTR TCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTATTTGACCAAATACTCTaGAATAGCAACTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: VVDNFVSTYLGITALAKLFDQIL*NSNSRD
Trigger: GTCTCTGGAGTTGCTATTTCAGAGTATTTGGTCAAA...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGAAAACAAGCCATTTTTaGCGTGGGTTTGGAGTCATT +
Preference number: 4 (lower is better)
Translates to: KITDKFGALDMTPKSYHVKTSHF*RGFGVI
Trigger: AATGACTCCAAACCCACGTCAAAAATGGCTTGTTTT...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGGATGGGTCTATCAATTaGTTCATCAGGCGATCTTTT +
Preference number: 4 (lower is better)
Translates to: KITDKFGALDMTPKSYHVDGSIN*FIRRSF
Trigger: AAAAGATCGCCTGATGAACCAATTGATAGACCCATC...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGAATATTATGCTGCTGTaGGCATCTAGCATTACACCA +
Preference number: 4 (lower is better)
Translates to: KITDKFGALDMTPKSYHVNIMLL*ASSITP
Trigger: TGGTGTAATGCTAGATGCCCACAGCAGCATAATATT...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGAGTCAAGACCAAAAGTaGACTTCTTTATCTGCACTA +
Preference number: 4 (lower is better)
Translates to: KITDKFGALDMTPKSYHVSQDQK*TSLSAL
Trigger: TAGTGCAGATAAAGAAGTTCACTTTTGGTCTTGACT...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR TCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTATCAGAAGGTGTCAACTaGTCGTGCTCTTTAAATAAA +
Preference number: 4 (lower is better)
Translates to: VVDNFVSTYLGITALAKLSEGVN*SCSLNK
Trigger: TTTATTTAAAGAGCACGATCAGTTGACACCTTCTGA...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGATATCAATTCCAAAATaGGCTAAGTGCTTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: KITDKFGALDMTPKSYHVISIPK*AKCLAK
Trigger: TTTGGCCAAGCACTTAGCGCATTTTGGAATTGATAT...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp AATCTTGTGTTGGATCTAAAGGCGAGTAGTCAAATATTCTGGGAAGGTTTCCTAATATCAATTCCAAAATaGGCTAAGTGCTTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: NLVLDLKASSQIFWEGFLISIPK*AKCLAK
Trigger: TTTGGCCAAGCACTTAGCGCATTTTGGAATTGATAT...TAGGAAACCTTCCCAGAATATTTGACTACTCGCCTTTAGATCCAACACAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000681649.1
CDS-3UTR GCA 90 bp TTCAAACTCAGGGTGGCTAAAGATCCAATCCAGTGCTCTTTCCAGGTTATTATTAAAGATCCAATCCAGTaGTCTTTCCAGGTTATTATT +
Preference number: 4 (lower is better)
Translates to: FKLRVAKDPIQCSFQVIIKDPIQ*SFQVII
Trigger: AATAATAACCTGGAAAGAGCACTGGATTGGATCTTT...AATAATAACCTGGAAAGAGCACTGGATTGGATCTTTAGCCACCCTGAGTTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680905.1
ENST00000681098.1
CDS-3UTR CCA 90 bp AATCTTGTGTTGGATCTAAAGGCGAGTAGTCAAATATTCTGGGAAGGTTTCCTAAGTAGTCAAATATTCTaGGAAGGTTTCCTACATACG +
Preference number: 4 (lower is better)
Translates to: NLVLDLKASSQIFWEGFLSSQIF*EGFLHT
Trigger: CGTATGTAGGAAACCTTCCCAGAATATTTGACTACT...TAGGAAACCTTCCCAGAATATTTGACTACTCGCCTTTAGATCCAACACAAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000680651.1
ENST00000681649.1
CDS-3UTR CCA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGCAAGCCTTCAAAATCTaGTGTGTATTGTATGTGTAC +
Preference number: 4 (lower is better)
Translates to: KITDKFGALDMTPKSYHVQAFKI*CVLYVY
Trigger: GTACACATACAATACACACCAGATTTTGAAGGCTTG...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTATATATGAAACACAAGTaGGCTTTTCATTTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: VVDNFVSTYLGITALAKLYMKHK*AFHLLW
Trigger: CCACAACAAATGAAAAGCCCACTTGTGTTTCATATA...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CCA 90 bp TTGCAGAGGCTCTATTATGGACAGAGCATAATATCTACATGGATACATCAGAAACAAGCCTTCAAAATCTaGTGTGTATTGTATGTGTAC +
Preference number: 4 (lower is better)
Translates to: LQRLYYGQSIISTWIHQKQAFKI*CVLYVY
Trigger: GTACACATACAATACACACCAGATTTTGAAGGCTTG...TTTCTGATGTATCCATGTAGATATTATGCTCTGTCCATAATAGAGCCTCTGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR GCA 90 bp ATTCACTTAATTCTTCATTCAATCAGTTATTTGCTGATCACTCACCATGGGCCAAAAGATCCAATCCAGTaGTCTTTCCAGGTTATTATT +
Preference number: 4 (lower is better)
Translates to: IHLILHSISYLLITHHGPKDPIQ*SFQVII
Trigger: AATAATAACCTGGAAAGAGCACTGGATTGGATCTTT...TGGCCCATGGTGAGTGATCAGCAAATAACTGATTGAATGAAGAATTAAGTGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679769.1
CDS GCA 90 bp CTGCCTCCGCTGCCGCCCGGCATGCCGAACAGGGCGCCCCGGCGCTaGATGGCCTCGGCGCGCACCGGAGCCGAGCGAGCCGAGCCGGAG +
Preference number: 5 (lower is better)
Translates to: LPPLPPGMPNRAPRR*MASARTGAERAEPE
Trigger: CTCCGGCTCGGCTCGCTCGGCTCCGGTGCGCGCCGAGGCCATGCAGCGCCGGGGCGCCCTGTTCGGCATGCCGGGCGGCAGCGGAGGCAG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263966.8
ENST00000482333.5
ENST00000679350.1
ENST00000679749.1
ENST00000680008.1
ENST00000680587.1
ENST00000681051.1
ENST00000681064.1
ENST00000681358.1
CDS GCA 90 bp CTAGCAGCTCGCCGATGTCTCCTGCAGCCATCTTCCTGCCTCCGCTaGCGCCCGGCATGCCGAACAGGGCGCCCCGGCGCTGCATGGCCT +
Preference number: 5 (lower is better)
Translates to: LAARRCLLQPSSCLR*RPACRTGRPGAAWP
Trigger: AGGCCATGCAGCGCCGGGGCGCCCTGTTCGGCATGCCGGGCGGCAGCGGAGGCAGGAAGATGGCTGCAGGAGACATCGGCGAGCTGCTAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263966.8
ENST00000482333.5
ENST00000679350.1
ENST00000679749.1
ENST00000680008.1
ENST00000680587.1
ENST00000681051.1
ENST00000681064.1
ENST00000681358.1
CDS CCA 90 bp ACTCGTTCTTGTAGACCCTGTCGCCGGACCTGGGCACGCGGATCGTaGGCATGTGGGGCACTAGCAGCTCGCCGATGTCTCCTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: TRSCRPCRRTWARGS*ACGALAARRCLLQP
Trigger: TGGCTGCAGGAGACATCGGCGAGCTGCTAGTGCCCCACATGCCCACGATCCGCGTGCCCAGGTCCGGCGACAGGGTCTACAAGAACGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263966.8
ENST00000482333.5
ENST00000679350.1
ENST00000679749.1
ENST00000680008.1
ENST00000680587.1
ENST00000681051.1
ENST00000681064.1
ENST00000681358.1
CDS CCA 90 bp CTGAGTGGACTGGACCTAGATGGGGCAGGGAGGTGCCGCGTGCCCTaGTCTGCATGGAAGGCACTTACGCTCTCTGGAATTCTGGGATGC +
Preference number: 5 (lower is better)
Translates to: LSGLDLDGAGRCRVP*SAWKALTLSGILGC
Trigger: GCATCCCAGAATTCCAGAGAGCGTAAGTGCCTTCCATGCAGACCAGGGCACGCGGCACCTCCCTGCCCCATCTAGGTCCAGTCCACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS CCA 90 bp ATAAAGATGGGCTTCGCAGCGCACACTGAGTGGACTGGACCTAGATaGGGCAGGGAGGTGCCGCGTGCCCTGGTCTGCATGGAAGGCACT +
Preference number: 5 (lower is better)
Translates to: IKMGFAAHTEWTGPR*GREVPRALVCMEGT
Trigger: AGTGCCTTCCATGCAGACCAGGGCACGCGGCACCTCCCTGCCCCATCTAGGTCCAGTCCACTCAGTGTGCGCTGCGAAGCCCATCTTTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS-3UTR CAA 90 bp TGCTCCAGCGCATGCCCGTTGCCCCCAGAGCTGTCAAAGAACCACTTTCCACACTCCAGCGCATGCCCGTaGCCCCCAGAGCTGTCAAAG +
Preference number: 5 (lower is better)
Translates to: CSSACPLPPELSKNHFPHSSACP*PPELSK
Trigger: CTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGA...GTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS GCA 90 bp TGGACTGGACCTAGATGGGGCAGGGAGGTGCCGCGTGCCCTGGTCTaGATGGAAGGCACTTACGCTCTCTGGAATTCTGGGATGCTGAAG +
Preference number: 5 (lower is better)
Translates to: WTGPRWGREVPRALV*MEGTYALWNSGMLK
Trigger: CTTCAGCATCCCAGAATTCCAGAGAGCGTAAGTGCCTTCCATGCAGACCAGGGCACGCGGCACCTCCCTGCCCCATCTAGGTCCAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS-3UTR CAA 90 bp GTAATGCTCCAGCGCATGCCCGTTGCCCCCAGAGCTGTCAAAGAACCACTTTCCTCCAGCGCATGCCCGTaGCCCCCAGAGCTGTCAAAG +
Preference number: 5 (lower is better)
Translates to: VMLQRMPVAPRAVKEPLSSSACP*PPELSK
Trigger: CTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGA...GGAAAGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGAGCATTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CAA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCATCCAGCGCATGCCCGTaGCCCCCAGAGCTGTCAAAG +
Preference number: 5 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPSSACP*PPELSK
Trigger: CTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGA...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTGAAGGGGTCTTCTGTTaGCTTCTGCTTCCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPEGVFC*LLLPFS
Trigger: CGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTC...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTCTGGCTCGGAGATGGTaGATATCAAGTAGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPLARRW*ISSRSG
Trigger: GCCAGACCTACTTGATATCAACCATCTCCGAGCCAG...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GGCTCCAGCAGAAGCTGCCCCTCCATAACCAGGCATGGTCAGCGGCTCAGCAAAGTGAAGTACACAGCCTaGCGACATGCTTCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: GSSRSCPSITRHGQRLSKVKYTA*RHASSG
Trigger: CCCGCTGGAAGCATGTCGCAAGGCTGTGTACTTCAC...TTTGCTGAGCCGCTGACCATGCCTGGTTATGGAGGGGCAGCTTCTGCTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR CAA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTTGGAATTCCTCCTTTTaGGTAACGCTCCACCAGACG +
Preference number: 5 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPWNSSF*VTLHQT
Trigger: CGTCTGGTGGAGCGTTACCAAAAAGGAGGAATTCCA...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp CTTCAGTTTCGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTTTCCAGCGCATGCCCGTaGCCCCCAGAGCTGTCAAAG +
Preference number: 5 (lower is better)
Translates to: LQFRARLLDHFPLTDPQLSSACP*PPELSK
Trigger: CTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGA...AAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAAACTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680055.1
ENST00000680651.1
CDS-3UTR CAA 90 bp CAGAGCCGTCAGTCAGATTCAACCAGAGGTTTTCTCGCAGGTCGCATCTGGCACTCCAGCGCATGCCCGTaGCCCCCAGAGCTGTCAAAG +
Preference number: 5 (lower is better)
Translates to: QSRQSDSTRGFLAGRIWHSSACP*PPELSK
Trigger: CTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGA...GTGCCAGATGCGACCTGCGAGAAAACCTCTGGTTGAATCTGACTGACGGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CAA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCGTTCATCCTTGTTGGTaGCCGCCTCCATGGCCACAG +
Preference number: 5 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTVHPCW*PPPWPQ
Trigger: CTGTGGCCATGGAGGCGGCAACCAACAAGGATGAAC...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCTCACACCCGCAGACTTaGCTTGTAGGGCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSSHPQT*LVGHCS
Trigger: GGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGA...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTTGGGCTTTTCATTTGTaGTGGGTAAGGCCACACCAC +
Preference number: 5 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPWAFHL*WVRPHH
Trigger: GTGGTGTGGCCTTACCCACAACAAATGAAAAGCCCA...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTCTGTTGACTGCCACATaGAATAGCACAGGTCTACCG +
Preference number: 5 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPLLTAT*NSTGLP
Trigger: CGGTAGACCTGTGCTATTCAATGTGGCAGTCAACAG...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCGGAATCCTGACTCCATaGTCCAGCTGGGTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSGILTP*SSWVRL
Trigger: CAACCTCACCCAGCTGGACAATGGAGTCAGGATTCC...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCACTCAGCTTGATGTCATaGTCCTGGAGCCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPLSLMS*SWSPFS
Trigger: AGAGAATGGGCTCCAGGACAATGACATCAAGCTGAG...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTAATTCCGGGTGGCTCTaGCTTACAAAGGCCTTAAAC +
Preference number: 5 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPNSGWL*LTKALN
Trigger: GTTTAAGGCCTTTGTAAGCAAGAGCCACCCGGAATT...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTAACGAAAAACATCGCTaGGGTTTTCTGAGCCGATGC +
Preference number: 5 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPNEKHR*GFLSRC
Trigger: GCATCGGCTCAGAAAACCCAAGCGATGTTTTTCGTT...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp AGAAGCTGCCCCTCCATAACCAGGCATGGTCAGCGGCTCAGCAAAATCTGGCTCTCACACCCGCAGACTTaGCTTGTAGGGCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: RSCPSITRHGQRLSKIWLSHPQT*LVGHCS
Trigger: GGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGA...GAGCCAGATTTTGCTGAGCCGCTGACCATGCCTGGTTATGGAGGGGCAGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR CAA 90 bp CTGATGTCTGGAAGTTCTTCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATGGTCACACCCGCAGACTTaGCTTGTAGGGCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: LMSGSSSSPGCNPLARRWSHPQT*LVGHCS
Trigger: GGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGA...CCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGAAGAACTTCCAGACATCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680167.1
CDS GCA 90 bp ACAGCCTTGCGACATGCTTCCAGCGGGAAACCCATCTCGGCCAGCTaGATCACTGATGACTCATCGATGTCTGATGCAGGTGGGTGCAGT +
Preference number: 5 (lower is better)
Translates to: TALRHASSGKPISAS*ITDDSSMSDAGGCS
Trigger: ACTGCACCCACCTGCATCAGACATCGATGAGTCATCAGTGATGCAGCTGGCCGAGATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681724.1
CDS-3UTR CAA 90 bp ATACATTGGCTTCAGTTTCGTGCCCGACTCCTGGATCACTTCCCACTCACTGACTCCAGCGCATGCCCGTaGCCCCCAGAGCTGTCAAAG +
Preference number: 5 (lower is better)
Translates to: IHWLQFRARLLDHFPLTDSSACP*PPELSK
Trigger: CTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGA...GTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAAACTGAAGCCAATGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680055.1
ENST00000680651.1
CDS-3UTR CAA 90 bp CAGATGAGGACAGTGAGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGAGCCAGGACCATACATaGGCTTCAGTTTCGTGCCCG +
Preference number: 5 (lower is better)
Translates to: QMRTVRHRTDEGLAQGPQSQDHT*ASVSCP
Trigger: CGGGCACGAAACTGAAGCCAATGTATGGTCCTGGCT...CTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCTCACTGTCCTCATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp CAGATGAGGACAGTGAGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGATCAGTTCATCCTTGTaGGTTGCCGCCTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: QMRTVRHRTDEGLAQGPQISSSL*VAASMA
Trigger: GGCCATGGAGGCGGCAACCAACAAGGATGAACTGAT...CTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCTCACTGTCCTCATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGCGATCAGTTCATCCTaGTTGGTTGCCGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPAISSS*LVAASM
Trigger: CATGGAGGCGGCAACCAACAAGGATGAACTGATCGC...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCAGCACTAAATGGTATCTaGGCACGTACCAACTCAGGA +
Preference number: 5 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPALNGI*ARTNSG
Trigger: TCCTGAGTTGGTACGTGCCAAGATACCATTTAGTGC...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp CCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGGGCCTTCCAAGATCACACTGTaGGTCACATCAGACAAGCAA +
Preference number: 5 (lower is better)
Translates to: PKVHSQLGAAPRSPGHGPSKITL*VTSDKQ
Trigger: TTGCTTGTCTGATGTGACCAACAGTGTGATCTTGGA...AGGCCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS TCA 90 bp TTGTCCCAGAAGACTTTCCAGTGGGACAACCTGCCCCGTCAGGAGTaGTGGTTCCCAGTTTCACGGCTAGTGGGTAGCCCATGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: LSQKTFQWDNLPRQE*WFPVSRLVGSPCLC
Trigger: ACAGAGACATGGGCTACCCACTAGCCGTGAAACTGGGAACCATCACTCCTGACGGGGCAGGTTGTCCCACTGGAAAGTCTTCTGGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680502.1
CDS GCA 90 bp ACAGCCTTGCGACATGCTTCCAGCGGGAAACCCATCTCGGCCAGCTaGATCACTGATGACTCATCGATGTCTGATGTTCACACCCGCAGA +
Preference number: 5 (lower is better)
Translates to: TALRHASSGKPISAS*ITDDSSMSDVHTRR
Trigger: TCTGCGGGTGTGAACATCAGACATCGATGAGTCATCAGTGATGCAGCTGGCCGAGATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679768.1
CDS CCA 90 bp TCTGCCTATCCGCCAACACCTGCCTCTGTAAACACACCAGCACCTTaGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGTTGGC +
Preference number: 5 (lower is better)
Translates to: SAYPPTPASVNTPAP*RNPDSIVQLGEVVG
Trigger: GCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGGTGCTGGTGTGTTTACAGAGGCAGGTGTTGGCGGATAGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681299.1
CDS CCA 90 bp CAGGCTCCTCTGGCACAGTTAATTCCAAATGCCCATCACTTCCCATaGAGTGAGATCCTGCAGGCCAGCTCTCCACAGCATCAGGCGCAA +
Preference number: 5 (lower is better)
Translates to: QAPLAQLIPNAHHFP*SEILQASSPQHQAQ
Trigger: TTGCGCCTGATGCTGTGGAGAGCTGGCCTGCAGGATCTCACTCCATGGGAAGTGATGGGCATTTGGAATTAACTGTGCCAGAGGAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679752.1
CDS-3UTR CAA 90 bp CGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTTGATGTCATTGGAATCCTGACTCCATaGTCCAGCTGGGTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: RARLLDHFPLTDPQLDVIGILTP*SSWVRL
Trigger: CAACCTCACCCAGCTGGACAATGGAGTCAGGATTCC...AATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679783.1
CDS-3UTR CAA 90 bp GACAGAGCCGTCAGTCAGATTCAACCAGAGGTTTTCTCGCAGGTCGCATCTGGCGGAATCCTGACTCCATaGTCCAGCTGGGTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: DRAVSQIQPEVFSQVASGGILTP*SSWVRL
Trigger: CAACCTCACCCAGCTGGACAATGGAGTCAGGATTCC...GCCAGATGCGACCTGCGAGAAAACCTCTGGTTGAATCTGACTGACGGCTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CAA 90 bp GGACAGAGCCGTCAGTCAGATTCAACCAGAGGTTTTCTCGCAGGTCGCATCTGGGGAATCCTGACTCCATaGTCCAGCTGGGTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: GQSRQSDSTRGFLAGRIWGILTP*SSWVRL
Trigger: CAACCTCACCCAGCTGGACAATGGAGTCAGGATTCC...CCAGATGCGACCTGCGAGAAAACCTCTGGTTGAATCTGACTGACGGCTCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CAA 90 bp TCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCACCCATCCAGCGCATGCCCGTaGCCCCCAGAGCTGTCAAAG +
Preference number: 5 (lower is better)
Translates to: SLQIPLKPLPHTWSWKHPSSACP*PPELSK
Trigger: CTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGA...TGGGTGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCATCACTGACCCTCAGCTaGATGTCATTGTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPSLTLS*MSLSWS
Trigger: GCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGA...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp CAGTTTCGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTTGATAGCCAGGACCATACATaGGCTTCAGTTTCGTGCCCG +
Preference number: 5 (lower is better)
Translates to: QFRARLLDHFPLTDPQLDSQDHT*ASVSCP
Trigger: CGGGCACGAAACTGAAGCCAATGTATGGTCCTGGCT...ATCAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679783.1
ENST00000680055.1
ENST00000680651.1
CDS-3UTR CAA 90 bp GTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGGGGAGCAGAGCCAGGACCATACATaGGCTTCAGTTTCGTGCCCG +
Preference number: 5 (lower is better)
Translates to: VQPSESPNRTLSSQAGEQSQDHT*ASVSCP
Trigger: CGGGCACGAAACTGAAGCCAATGTATGGTCCTGGCT...CTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp ATTGGCTTCAGTTTCGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCCTCAGCCAGGACCATACATaGGCTTCAGTTTCGTGCCCG +
Preference number: 5 (lower is better)
Translates to: IGFSFVPDSWITSHSLTLSQDHT*ASVSCP
Trigger: CGGGCACGAAACTGAAGCCAATGTATGGTCCTGGCT...GAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAAACTGAAGCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679783.1
ENST00000680055.1
ENST00000680651.1
CDS-3UTR CAA 90 bp GCAAAGCGAGATGTTTTCACACCCGCAGACTTTGCTTGTAGGGCACTGCTCCAGGTTCATCCTTGTTGGTaGCCGCCTCCATGGCCACAG +
Preference number: 5 (lower is better)
Translates to: AKRDVFTPADFACRALLQVHPCW*PPPWPQ
Trigger: CTGTGGCCATGGAGGCGGCAACCAACAAGGATGAAC...CTGGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGAAAACATCTCGCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680853.1
CDS-3UTR CAA 90 bp GGCCACCTCGGCGCCCATATTTCCAGTGAAGTACACAGCCTTGCGACATGCTTCGAAGGGGTCTTCTGTTaGCTTCTGCTTCCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: GHLGAHISSEVHSLATCFEGVFC*LLLPFS
Trigger: CGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTC...GAAGCATGTCGCAAGGCTGTGTACTTCACTGGAAATATGGGCGCCGAGGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR CAA 90 bp TTTCCAGTGAAGTACACAGCCTTGCGACATGCTTCCAGCGGGAAACCCATCTCGTCACACCCGCAGACTTaGCTTGTAGGGCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: FPVKYTALRHASSGKPISSHPQT*LVGHCS
Trigger: GGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGA...CGAGATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGTGTACTTCACTGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR CAA 90 bp CTGATGTCTGGAAGTTCTTCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATGGCTGGCTCGGAGATGGTaGATATCAAGTAGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: LMSGSSSSPGCNPLARRWLARRW*ISSRSG
Trigger: GCCAGACCTACTTGATATCAACCATCTCCGAGCCAG...CCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGAAGAACTTCCAGACATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679954.1
ENST00000680167.1
CDS-3UTR CAA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCTGGGCTTTTCATTTGTaGTGGGTAAGGCCACACCAC +
Preference number: 5 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSWAFHL*WVRPHH
Trigger: GTGGTGTGGCCTTACCCACAACAAATGAAAAGCCCA...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCATGTAGAAATAGCCCTTaGTGTTGTGGGGCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPCRNSP*CCGAEE
Trigger: TTCTTCTGCCCCACAACACAAAGGGCTATTTCTACA...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCTGTTGACTGCCACATaGAATAGCACAGGTCTACCG +
Preference number: 5 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTLLTAT*NSTGLP
Trigger: CGGTAGACCTGTGCTATTCAATGTGGCAGTCAACAG...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS GCA 90 bp ACAGCCTTGCGACATGCTTCCAGCGGGAAACCCATCTCGGCCAGCTaGATCACTGATGACTCATCGATGTCTGATGCTGTAATCCCAGCT +
Preference number: 5 (lower is better)
Translates to: TALRHASSGKPISAS*ITDDSSMSDAVIPA
Trigger: AGCTGGGATTACAGCATCAGACATCGATGAGTCATCAGTGATGCAGCTGGCCGAGATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680856.1
CDS GCA 90 bp ACAGCCTTGCGACATGCTTCCAGCGGGAAACCCATCTCGGCCAGCTaGATCACTGATGACTCATCGATGTCTGATGCTACAGAGCACAAC +
Preference number: 5 (lower is better)
Translates to: TALRHASSGKPISAS*ITDDSSMSDATEHN
Trigger: GTTGTGCTCTGTAGCATCAGACATCGATGAGTCATCAGTGATGCAGCTGGCCGAGATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679752.1
CDS-3UTR CAA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCTGCATCACAAGCAATaGTTACCAGGGCTGGTAACT +
Preference number: 5 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTLHHKQ*LPGLVT
Trigger: AGTTACCAGCCCTGGTAACAATTGCTTGTGATGCAG...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GCGCATGCCCGTTGCCCCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACAGAGCTGGGTGAGGTTGTaGGCATATTTAGATACTGGC +
Preference number: 5 (lower is better)
Translates to: AHARCPQSCQRTTFHTGQSWVRL*AYLDTG
Trigger: GCCAGTATCTAAATATGCCAACAACCTCACCCAGCT...CTGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CAA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCAGCTGGGTGAGGTTGTaGGCATATTTAGATACTGGC +
Preference number: 5 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSSWVRL*AYLDTG
Trigger: GCCAGTATCTAAATATGCCAACAACCTCACCCAGCT...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp AGAGCCGTCAGTCAGATTCAACCAGAGGTTTTCTCGCAGGTCGCATCTGGCACAGGAATCCTGACTCCATaGTCCAGCTGGGTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: RAVSQIQPEVFSQVASGTGILTP*SSWVRL
Trigger: CAACCTCACCCAGCTGGACAATGGAGTCAGGATTCC...TGTGCCAGATGCGACCTGCGAGAAAACCTCTGGTTGAATCTGACTGACGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CAA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCACTCAGCTTGATGTCATaGTCCTGGAGCCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPLSLMS*SWSPFS
Trigger: AGAGAATGGGCTCCAGGACAATGACATCAAGCTGAG...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGCCGTTCTGCTGTGGCTaGTGCTCCTCCTTCATCACC +
Preference number: 5 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMPFCCG*CSSFIT
Trigger: GGTGATGAAGGAGGAGCACAAGCCACAGCAGAACGG...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GGAGAATTCCGGGTGGCTCTTGCTTACAAAGGCCTTAAACATGCGCGGAGAGATCCGTTCTGCTGTGGCTaGTGCTCCTCCTTCATCACC +
Preference number: 5 (lower is better)
Translates to: GEFRVALAYKGLKHARRDPFCCG*CSSFIT
Trigger: GGTGATGAAGGAGGAGCACAAGCCACAGCAGAACGG...ATCTCTCCGCGCATGTTTAAGGCCTTTGTAAGCAAGAGCCACCCGGAATTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR CAA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCAACGAAAAACATCGCTaGGGTTTTCTGAGCCGATGC +
Preference number: 5 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSNEKHR*GFLSRC
Trigger: GCATCGGCTCAGAAAACCCAAGCGATGTTTTTCGTT...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGGTTCATCCTTGTTGGTaGCCGCCTCCATGGCCACAG +
Preference number: 5 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQVHPCW*PPPWPQ
Trigger: CTGTGGCCATGGAGGCGGCAACCAACAAGGATGAAC...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp ATGTCTGGAAGTTCTTCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATGGTTGGAAGGGGTCTTCTGTTaGCTTCTGCTTCCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: MSGSSSSPGCNPLARRWLEGVFC*LLLPFS
Trigger: CGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTC...CAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGAAGAACTTCCAGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679954.1
ENST00000680167.1
CDS-3UTR CAA 90 bp GAAGTACACAGCCTTGCGACATGCTTCCAGCGGGAAACCCATCTCGGCCAGCTGGCACTAAATGGTATCTaGGCACGTACCAACTCAGGA +
Preference number: 5 (lower is better)
Translates to: EVHSLATCFQRETHLGQLALNGI*ARTNSG
Trigger: TCCTGAGTTGGTACGTGCCAAGATACCATTTAGTGC...CAGCTGGCCGAGATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGTGTACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR CAA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGGTGAAGTACACAGCCTaGCGACATGCTTCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMVKYTA*RHASSG
Trigger: CCCGCTGGAAGCATGTCGCAAGGCTGTGTACTTCAC...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCAAGTGGGCTTTTCATTaGTTGTGGGTAAGGCCACAC +
Preference number: 5 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTKWAFH*LWVRPH
Trigger: GTGTGGCCTTACCCACAACAAATGAAAAGCCCACTT...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCCCCAATGTCTGTGCTTaGTTTCACCTGGTTGGTTCT +
Preference number: 5 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSPNVCA*FHLVGS
Trigger: AGAACCAACCAGGTGAAACAAAGCACAGACATTGGG...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GAAGCAAAGCGAGATGTTTTCACACCCGCAGACTTTGCTTGTAGGGCACTGCTCGGGCATCTTGCTGCCTaGTGCTCCTCCTTCATCACC +
Preference number: 5 (lower is better)
Translates to: EAKRDVFTPADFACRALLGHLAA*CSSFIT
Trigger: GGTGATGAAGGAGGAGCACAAGGCAGCAAGATGCCC...GAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGAAAACATCTCGCTTTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680853.1
CDS-3UTR CAA 90 bp CCAACTCAGGAAGGGGTCTTCTGTTTGCTTCTGCTTCCCTTCTCGTTAGTTCATCGCTCTTACCCCTTGTaGGTTGCCGCCTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: PTQEGVFCLLLLPFSLVHRSYPL*VAASMA
Trigger: GGCCATGGAGGCGGCAACCAACAAGGGGTAAGAGCG...ATGAACTAACGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTCCTGAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681560.1
CDS-3UTR CAA 90 bp GGCACGTACCAACTCAGGAAGGGGTCTTCTGTTTGCTTCTGCTTCCCTTCTCGTAATCGCTCTTACCCCTaGTTGGTTGCCGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: GTYQLRKGSSVCFCFPSRNRSYP*LVAASM
Trigger: CATGGAGGCGGCAACCAACAAGGGGTAAGAGCGATT...ACGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTCCTGAGTTGGTACGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681560.1
CDS GCA 90 bp ACAGCCTTGCGACATGCTTCCAGCGGGAAACCCATCTCGGCCAGCTaGATCACTGATGACTCATCGATGTCTGATGGGTCTATCAATTGG +
Preference number: 5 (lower is better)
Translates to: TALRHASSGKPISAS*ITDDSSMSDGSINW
Trigger: CCAATTGATAGACCCATCAGACATCGATGAGTCATCAGTGATGCAGCTGGCCGAGATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263966.8
ENST00000496897.5
ENST00000679893.1
ENST00000679972.1
ENST00000680008.1
ENST00000680587.1
CDS-3UTR CAA 90 bp GTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGGGGAGCAGTGGAATTCCTCCTTTTaGGTAACGCTCCACCAGACG +
Preference number: 5 (lower is better)
Translates to: VQPSESPNRTLSSQAGEQWNSSF*VTLHQT
Trigger: CGTCTGGTGGAGCGTTACCAAAAAGGAGGAATTCCA...CTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp CAGATGAGGACAGTGAGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGAGCTGGGTGAGGTTGTaGGCATATTTAGATACTGGC +
Preference number: 5 (lower is better)
Translates to: QMRTVRHRTDEGLAQGPQSWVRL*AYLDTG
Trigger: GCCAGTATCTAAATATGCCAACAACCTCACCCAGCT...CTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCTCACTGTCCTCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GCATGCCCGTTGCCCCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACAGAGAGCTGGGTGAGGTTGTaGGCATATTTAGATACTGGC +
Preference number: 5 (lower is better)
Translates to: ACPLPPELSKNHFPHRTESWVRL*AYLDTG
Trigger: GCCAGTATCTAAATATGCCAACAACCTCACCCAGCT...CTCTGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CAA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCTCCAGCTGGGTGAGGTaGTTGGCATATTTAGATACT +
Preference number: 5 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTSSWVR*LAYLDT
Trigger: AGTATCTAAATATGCCAACAACCTCACCCAGCTGGA...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GCGCATGCCCGTTGCCCCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACAGTCCAGCTGGGTGAGGTaGTTGGCATATTTAGATACT +
Preference number: 5 (lower is better)
Translates to: AHARCPQSCQRTTFHTGQSSWVR*LAYLDT
Trigger: AGTATCTAAATATGCCAACAACCTCACCCAGCTGGA...CTGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CAA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCTCCAGCTGGGTGAGGTaGTTGGCATATTTAGATACT +
Preference number: 5 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSSSWVR*LAYLDT
Trigger: AGTATCTAAATATGCCAACAACCTCACCCAGCTGGA...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp AGATTCAACCAGAGGTTTTCTCGCAGGTCGCATCTGGCACACTTCCAACCACTGGGAATCCTGACTCCATaGTCCAGCTGGGTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: RFNQRFSRRSHLAHFQPLGILTP*SSWVRL
Trigger: CAACCTCACCCAGCTGGACAATGGAGTCAGGATTCC...CAGTGGTTGGAAGTGTGCCAGATGCGACCTGCGAGAAAACCTCTGGTTGAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680276.1
CDS-3UTR CAA 90 bp GAAAAGAATAAACATAACAGCCTCGGGCAGGTCCTTCAGAAGGCATTCCAGAACTCCAGCGCATGCCCGTaGCCCCCAGAGCTGTCAAAG +
Preference number: 5 (lower is better)
Translates to: EKNKHNSLGQVLQKAFQNSSACP*PPELSK
Trigger: CTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGA...GTTCTGGAATGCCTTCTGAAGGACCTGCCCGAGGCTGTTATGTTTATTCTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681109.1
CDS-3UTR CAA 90 bp CGACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTTGATGTCATTGTCCTGTCACTGACCCTCAGCTaGATGTCATTGTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: RLLDHFPLTDPQLDVIVLSLTLS*MSLSWS
Trigger: GCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGA...CAGGACAATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679783.1
ENST00000680055.1
CDS-3UTR CAA 90 bp CAGGTTCTTCAGACCCGTGTAGCCAGGACCATACATTGGCTTCAGTTTCGTGCCTCACTGACCCTCAGCTaGATGTCATTGTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: QVLQTRVARTIHWLQFRASLTLS*MSLSWS
Trigger: GCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGA...GGCACGAAACTGAAGCCAATGTATGGTCCTGGCTACACGGGTCTGAAGAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000679783.1
ENST00000680055.1
ENST00000680307.1
ENST00000680651.1
ENST00000681649.1
CDS-3UTR CAA 90 bp GGGAAGGTTTCCTACATACCCAGTCTCTGTAGAAGGCAGGCCAGAGAAAAGGTGAGCCAGGACCATACATaGGCTTCAGTTTCGTGCCCG +
Preference number: 5 (lower is better)
Translates to: GKVSYIPSLCRRQAREKVSQDHT*ASVSCP
Trigger: CGGGCACGAAACTGAAGCCAATGTATGGTCCTGGCT...CACCTTTTCTCTGGCCTGCCTTCTACAGAGACTGGGTATGTAGGAAACCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS-3UTR CAA 90 bp GGGAAGGTTTCCTACATACGCTCTCTGGAATTCTGGGATGCTGAAGATGGCCTGAGCCAGGACCATACATaGGCTTCAGTTTCGTGCCCG +
Preference number: 5 (lower is better)
Translates to: GKVSYIRSLEFWDAEDGLSQDHT*ASVSCP
Trigger: CGGGCACGAAACTGAAGCCAATGTATGGTCCTGGCT...CAGGCCATCTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGGAAACCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000680651.1
ENST00000681649.1
CDS-3UTR CAA 90 bp GAAGGCCACCTCGGCGCCCATATTTCCAGTGAAGTACACAGCCTTGCGACATGCGCACTAAATGGTATCTaGGCACGTACCAACTCAGGA +
Preference number: 5 (lower is better)
Translates to: EGHLGAHISSEVHSLATCALNGI*ARTNSG
Trigger: TCCTGAGTTGGTACGTGCCAAGATACCATTTAGTGC...GCATGTCGCAAGGCTGTGTACTTCACTGGAAATATGGGCGCCGAGGTGGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR CAA 90 bp TGGTTCAGAGAAGGCCTGAAGGCAGGCACTAAATGGTATCTTGGCACGTACCAATCACACCCGCAGACTTaGCTTGTAGGGCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: WFREGLKAGTKWYLGTYQSHPQT*LVGHCS
Trigger: GGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGA...TTGGTACGTGCCAAGATACCATTTAGTGCCTGCCTTCAGGCCTTCTCTGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
CDS-3UTR CAA 90 bp CAGATGAGGACAGTGAGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGCTAGGTCCTTCGGGCTaGGCCTCAGAAATAATGTTT +
Preference number: 5 (lower is better)
Translates to: QMRTVRHRTDEGLAQGPQLGPSG*ASEIMF
Trigger: AAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAG...CTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCTCACTGTCCTCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCTGTAATGACCACTCATaGTGGATGTTCCCATGTGAC +
Preference number: 5 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSCNDHS*WMFPCD
Trigger: GTCACATGGGAACATCCACAATGAGTGGTCATTACA...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp CCAACCACTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGTTGGCCTGCATCACAAGCAATaGTTACCAGGGCTGGTAACT +
Preference number: 5 (lower is better)
Translates to: PTTWRNPDSIVQLGEVVGLHHKQ*LPGLVT
Trigger: AGTTACCAGCCCTGGTAACAATTGCTTGTGATGCAG...GCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTGGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497380.1
ENST00000679350.1
CDS-3UTR CAA 90 bp CAGAGCCGTCAGTCAGATTCAACCAGAGGTTTTCTCGCAGGTCGCATCTGGCACAGCTGGGTGAGGTTGTaGGCATATTTAGATACTGGC +
Preference number: 5 (lower is better)
Translates to: QSRQSDSTRGFLAGRIWHSWVRL*AYLDTG
Trigger: GCCAGTATCTAAATATGCCAACAACCTCACCCAGCT...GTGCCAGATGCGACCTGCGAGAAAACCTCTGGTTGAATCTGACTGACGGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CAA 90 bp TACATTGGCTTCAGTTTCGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTTGATGTCATaGTCCTGGAGCCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: YIGFSFVPDSWITSHSLTLSLMS*SWSPFS
Trigger: AGAGAATGGGCTCCAGGACAATGACATCAAGCTGAG...GGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAAACTGAAGCCAATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679783.1
ENST00000680055.1
ENST00000680651.1
ENST00000681649.1
CDS-3UTR CAA 90 bp ACTTCCCACTCACTGACCCTCAGCTTGATGTCATTGTCCTGGAGCCCATTCTCTTCACTGACCCTCAGCTaGATGTCATTGTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: TSHSLTLSLMSLSWSPFSSLTLS*MSLSWS
Trigger: GCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGA...AGAGAATGGGCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679783.1
ENST00000680055.1
CDS-3UTR CAA 90 bp GTTTCCTACATACGCTCTCTGGAATTCTGGGATGCTGAAGATGGCCTGCATGACAGCCAGGACCATACATaGGCTTCAGTTTCGTGCCCG +
Preference number: 5 (lower is better)
Translates to: VSYIRSLEFWDAEDGLHDSQDHT*ASVSCP
Trigger: CGGGCACGAAACTGAAGCCAATGTATGGTCCTGGCT...GTCATGCAGGCCATCTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000680651.1
ENST00000681649.1
CDS-3UTR CAA 90 bp CCATGGCCACAGGTAACTGCATCAGGTAATCCACCCTCTCCGTGTAGCGGACTTATTTCACCGGAGGCTTaGAATACTGGCCTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: PWPQVTASGNPPSPCSGLISPEA*NTGLRE
Trigger: TTCTCTCAGGCCAGTATTCAAAGCCTCCGGTGAAAT...AAGTCCGCTACACGGAGAGGGTGGATTACCTGATGCAGTTACCTGTGGCCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR CAA 90 bp TGTTGGTTGCCGCCTCCATGGCCACAGGTAACTGCATCAGGTAATCCACCCTCTATTTCACCGGAGGCTTaGAATACTGGCCTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: CWLPPPWPQVTASGNPPSISPEA*NTGLRE
Trigger: TTCTCTCAGGCCAGTATTCAAAGCCTCCGGTGAAAT...AGAGGGTGGATTACCTGATGCAGTTACCTGTGGCCATGGAGGCGGCAACCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR CAA 90 bp GTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGGGGAGCAGAATTCCGGGTGGCTCTaGCTTACAAAGGCCTTAAAC +
Preference number: 5 (lower is better)
Translates to: VQPSESPNRTLSSQAGEQNSGWL*LTKALN
Trigger: GTTTAAGGCCTTTGTAAGCAAGAGCCACCCGGAATT...CTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp GTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGGGGAGCAGAACGAAAAACATCGCTaGGGTTTTCTGAGCCGATGC +
Preference number: 5 (lower is better)
Translates to: VQPSESPNRTLSSQAGEQNEKHR*GFLSRC
Trigger: GCATCGGCTCAGAAAACCCAAGCGATGTTTTTCGTT...CTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp TGTTGGTTGCCGCCTCCATGGCCACAGGTAACTGCATCAGGTAATCCACCCTCTAACGAAAAACATCGCTaGGGTTTTCTGAGCCGATGC +
Preference number: 5 (lower is better)
Translates to: CWLPPPWPQVTASGNPPSNEKHR*GFLSRC
Trigger: GCATCGGCTCAGAAAACCCAAGCGATGTTTTTCGTT...AGAGGGTGGATTACCTGATGCAGTTACCTGTGGCCATGGAGGCGGCAACCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR CAA 90 bp TCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCACCCAATCAGTTCATCCTTGTaGGTTGCCGCCTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: SLQIPLKPLPHTWSWKHPISSSL*VAASMA
Trigger: GGCCATGGAGGCGGCAACCAACAAGGATGAACTGAT...TGGGTGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp TGGTTCAGAGAAGGCCTGAAGGCAGGCACTAAATGGTATCTTGGCACGTACCAAATCAGTTCATCCTTGTaGGTTGCCGCCTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: WFREGLKAGTKWYLGTYQISSSL*VAASMA
Trigger: GGCCATGGAGGCGGCAACCAACAAGGATGAACTGAT...TTGGTACGTGCCAAGATACCATTTAGTGCCTGCCTTCAGGCCTTCTCTGAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680853.1
CDS-3UTR CAA 90 bp TCTCCTGGCTGTAACCCCCTGGCTCGGAGATGGTTGATATCAAGTAGGTCTGGCGCACTAAATGGTATCTaGGCACGTACCAACTCAGGA +
Preference number: 5 (lower is better)
Translates to: SPGCNPLARRWLISSRSGALNGI*ARTNSG
Trigger: TCCTGAGTTGGTACGTGCCAAGATACCATTTAGTGC...GCCAGACCTACTTGATATCAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680167.1
CDS-3UTR CAA 90 bp CACACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTTCACACCCGCAGACTTaGCTTGTAGGGCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: HTWSWKHPVNERLSRSSFSHPQT*LVGHCS
Trigger: GGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGA...AAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp AGTTCTTCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATGGTTGATATCAAGTCTGGCTCGGAGATGGTaGATATCAAGTAGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: SSSSPGCNPLARRWLISSLARRW*ISSRSG
Trigger: GCCAGACCTACTTGATATCAACCATCTCCGAGCCAG...ACTTGATATCAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGAAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679954.1
ENST00000680167.1
CDS-3UTR CAA 90 bp ATAACCAGGCATGGTCAGCGGCTCAGCAAAATCTGGCTCTTCCATGTGAACAATGTGAAGTACACAGCCTaGCGACATGCTTCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: ITRHGQRLSKIWLFHVNNVKYTA*RHASSG
Trigger: CCCGCTGGAAGCATGTCGCAAGGCTGTGTACTTCAC...ATTGTTCACATGGAAGAGCCAGATTTTGCTGAGCCGCTGACCATGCCTGGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR CAA 90 bp GGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGGCCACTTTGTTTCACCTGGTaGGTTCTGTTTATTTTCCTA +
Preference number: 5 (lower is better)
Translates to: GLAQGPQSARSSTQVSRPLCFTW*VLFIFL
Trigger: TAGGAAAATAAACAGAACCAACCAGGTGAAACAAAG...TGGCCTGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCCAACACAGTCTCGATTaGAACAAGCCAAACTTTGAG +
Preference number: 5 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSQHSLD*NKPNFE
Trigger: CTCAAAGTTTGGCTTGTTCAAATCGAGACTGTGTTG...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp TTCTGGTTCAGAGAAGGCCTGAAGGCAGGCACTAAATGGTATCTTGGCACGTACGAATTCCTGGGCATCTaGCTGCCTTGTGCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: FWFREGLKAGTKWYLGTYEFLGI*LPCAPP
Trigger: AGGAGGAGCACAAGGCAGCAAGATGCCCAGGAATTC...GTACGTGCCAAGATACCATTTAGTGCCTGCCTTCAGGCCTTCTCTGAACCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680853.1
CDS-3UTR CAA 90 bp ACTCAGGAAGGGGTCTTCTGTTTGCTTCTGCTTCCCTTCTCGTTAGTTCATAAGCTTACCCCTTGTTGGTaGCCGCCTCCATGGCCACAG +
Preference number: 5 (lower is better)
Translates to: TQEGVFCLLLLPFSLVHKLTPCW*PPPWPQ
Trigger: CTGTGGCCATGGAGGCGGCAACCAACAAGGGGTAAG...CTTATGAACTAACGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTCCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681560.1
CDS TCA 90 bp CTATGCCATCTAAGTTTGTCCAAGTATACTCTGCCCCGTCAGGAGTaGTGGTTCCCAGTTTCACGGCTAGTGGGTAGCCCATGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: LCHLSLSKYTLPRQE*WFPVSRLVGSPCLC
Trigger: ACAGAGACATGGGCTACCCACTAGCCGTGAAACTGGGAACCATCACTCCTGACGGGGCAGAGTATACTTGGACAAACTTAGATGGCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680055.1
ENST00000681109.1
ENST00000681356.1
CDS TCA 90 bp GGGGCTGTCAGCAAACCAAGATCTAGGGAACAAGAGAAAGATCTGTaGCATGACATCCAGCAGATAAAGTCCAAGGCAGGAGACTCCGCC +
Preference number: 5 (lower is better)
Translates to: GAVSKPRSREQEKDL*HDIQQIKSKAGDSA
Trigger: GGCGGAGTCTCCTGCCTTGGACTTTATCTGCTGGATGTCATGTCACAGATCTTTCTCTTGTTCCCTAGATCTTGGTTTGCTGACAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679407.1
CDS GCA 90 bp CACAGAGGTAACAATGTGCCACCACTGATGGTCCACTGTGATGGCTaGCTGGTAACGCCAAGAACCCCTTCCTTCCTTTTTGATATGGCA +
Preference number: 5 (lower is better)
Translates to: HRGNNVPPLMVHCDG*LVTPRTPSFLFDMA
Trigger: TGCCATATCAAAAAGGAAGGAAGGGGTTCTTGGCGTTACCAGGCAGCCATCACAGTGGACCATCAGTGGTGGCACATTGTTACCTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680549.1
CDS-3UTR CAA 90 bp CGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTTGATGTCATTTCCAGCTGGGTGAGGTaGTTGGCATATTTAGATACT +
Preference number: 5 (lower is better)
Translates to: RARLLDHFPLTDPQLDVISSWVR*LAYLDT
Trigger: AGTATCTAAATATGCCAACAACCTCACCCAGCTGGA...AATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679783.1
CDS-3UTR CAA 90 bp GTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGGGGAGCAGTCCAGCTGGGTGAGGTaGTTGGCATATTTAGATACT +
Preference number: 5 (lower is better)
Translates to: VQPSESPNRTLSSQAGEQSSWVR*LAYLDT
Trigger: AGTATCTAAATATGCCAACAACCTCACCCAGCTGGA...CTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp TTGCCCCCAGAGCTGTCAAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCTCCAGCTGGGTGAGGTaGTTGGCATATTTAGATACT +
Preference number: 5 (lower is better)
Translates to: LPPELSKNHFPHRTEPSVSSWVR*LAYLDT
Trigger: AGTATCTAAATATGCCAACAACCTCACCCAGCTGGA...GACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CAA 90 bp GCATATCAATTCCAAAATGCGCTAAGTGCTTGGCCAAATGAGGATCCAAAACAGTCCAGCGCATGCCCGTaGCCCCCAGAGCTGTCAAAG +
Preference number: 5 (lower is better)
Translates to: AYQFQNALSAWPNEDPKQSSACP*PPELSK
Trigger: CTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGA...CTGTTTTGGATCCTCATTTGGCCAAGCACTTAGCGCATTTTGGAATTGATATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000680055.1
ENST00000680276.1
ENST00000681109.1
CDS-3UTR CAA 90 bp ACTGACCCTCAGCTTGATGTCATTGTCCTGGAGCCCATTCTCTGTCCCATGCATCTCAGCTTGATGTCATaGTCCTGGAGCCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: TDPQLDVIVLEPILCPMHLSLMS*SWSPFS
Trigger: AGAGAATGGGCTCCAGGACAATGACATCAAGCTGAG...ATGCATGGGACAGAGAATGGGCTCCAGGACAATGACATCAAGCTGAGGGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679783.1
ENST00000680055.1
CDS-3UTR CAA 90 bp GGGAAGGTTTCCTACATACCCAGTCTCTGTAGAAGGCAGGCCAGAGAAAAGGTGCTCAGCTTGATGTCATaGTCCTGGAGCCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: GKVSYIPSLCRRQAREKVLSLMS*SWSPFS
Trigger: AGAGAATGGGCTCCAGGACAATGACATCAAGCTGAG...CACCTTTTCTCTGGCCTGCCTTCTACAGAGACTGGGTATGTAGGAAACCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS-3UTR CAA 90 bp GGAAGGTTTCCTACATACGCTCTCTGGAATTCTGGGATGCTGAAGATGGCCTGCCTCAGCTTGATGTCATaGTCCTGGAGCCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: GRFPTYALWNSGMLKMACLSLMS*SWSPFS
Trigger: AGAGAATGGGCTCCAGGACAATGACATCAAGCTGAG...GCAGGCCATCTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGGAAACCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679783.1
ENST00000680651.1
ENST00000681649.1
CDS-3UTR CAA 90 bp CGGCTCAGCAAAATCTGGCTCTTCCATGTGAACAATGATCCAGTTGAAGGCCACGAAGGGGTCTTCTGTTaGCTTCTGCTTCCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: RLSKIWLFHVNNDPVEGHEGVFC*LLLPFS
Trigger: CGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTC...GTGGCCTTCAACTGGATCATTGTTCACATGGAAGAGCCAGATTTTGCTGAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679768.1
ENST00000679893.1
CDS-3UTR CAA 90 bp TTCAGAGAAGGCCTGAAGGCAGGCACTAAATGGTATCTTGGCACGTACCAACTCGAAGGGGTCTTCTGTTaGCTTCTGCTTCCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: FREGLKAGTKWYLGTYQLEGVFC*LLLPFS
Trigger: CGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTC...GAGTTGGTACGTGCCAAGATACCATTTAGTGCCTGCCTTCAGGCCTTCTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
CDS-3UTR CAA 90 bp TTTTCACACCCGCAGACTTTGCTTGTAGGGCACTGCTCCAGAAATCATCAACATTCACACCCGCAGACTTaGCTTGTAGGGCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: FSHPQTLLVGHCSRNHQHSHPQT*LVGHCS
Trigger: GGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGA...ATGTTGATGATTTCTGGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
CDS-3UTR CAA 90 bp ACTGTCTTCTTCAAACTCAGGGTGGCTAAAGATCCAATCCAGTGCTCTTTCCAGGTGAAGTACACAGCCTaGCGACATGCTTCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: TVFFKLRVAKDPIQCSFQVKYTA*RHASSG
Trigger: CCCGCTGGAAGCATGTCGCAAGGCTGTGTACTTCAC...CTGGAAAGAGCACTGGATTGGATCTTTAGCCACCCTGAGTTTGAAGAAGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680905.1
ENST00000681098.1
ENST00000681362.1
CDS-3UTR CAA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCACATTCTACTCATaGAAGGTTCACTGTAACCAA +
Preference number: 5 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSTTFYS*KVHCNQ
Trigger: TTGGTTACAGTGAACCTTCAATGAGTAGAATGTGGT...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGACCAGTGGGCACACTTaGGTAGAAAAGTACTGCACC +
Preference number: 5 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQTSGHT*VEKYCT
Trigger: GGTGCAGTACTTTTCTACCAAAGTGTGCCCACTGGT...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp CAGATGAGGACAGTGAGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGGAAAACAAGCCATTTTaGACGTGGGTTTGGAGTCAT +
Preference number: 5 (lower is better)
Translates to: QMRTVRHRTDEGLAQGPQENKPF*TWVWSH
Trigger: ATGACTCCAAACCCACGTCAAAAATGGCTTGTTTTC...CTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCTCACTGTCCTCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCATAGGGGAACCTGCCTaGTATATATTGAGATACACA +
Preference number: 5 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSIGEPA*YILRYT
Trigger: TGTGTATCTCAATATATACAAGGCAGGTTCCCCTAT...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp CACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAAGAGTACAGAACCTaGTTCTATAGCGTAGGATTT +
Preference number: 5 (lower is better)
Translates to: HRTDEGLAQGPQSARSSTQEYRT*FYSVGF
Trigger: AAATCCTACGCTATAGAACAAGGTTCTGTACTCTTG...GGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCCAAGAGTACAGAACCTaGTTCTATAGCGTAGGATTT +
Preference number: 5 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSQEYRT*FYSVGF
Trigger: AAATCCTACGCTATAGAACAAGGTTCTGTACTCTTG...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp ATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAATCCACATGTCTAATTaGAAGTTCTTTAGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: MKDLPKVHSQLGAAPRSPIHMSN*KFFRGH
Trigger: GTGGCCCCTAAAGAACTTCAAATTAGACATGTGGAT...TGGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp ACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTCCCCTTTCCCTCGAGTTCTaGCAGGTCTGGGTCTATGAG +
Preference number: 5 (lower is better)
Translates to: TWSWKHPVNERLSRSSFPLSLEF*QVWVYE
Trigger: CTCATAGACCCAGACCTGCAAGAACTCGAGGGAAAG...GGGAAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602704.2
CDS-3UTR CAA 90 bp AACCAGAGGTTTTCTCGCAGGTCGCATCTGGCACACTTCCAACCACTTGGAGGACTGCATCACAAGCAATaGTTACCTGACACAGAGCCA +
Preference number: 5 (lower is better)
Translates to: NQRFSRRSHLAHFQPLGGLHHKQ*LPDTEP
Trigger: TGGCTCTGTGTCAGGTAACAATTGCTTGTGATGCAG...TCCTCCAAGTGGTTGGAAGTGTGCCAGATGCGACCTGCGAGAAAACCTCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681128.1
CDS-3UTR CAA 90 bp GTCAGATTCAACCAGAGGTTTTCTCGCAGGTCGCATCTGGCACACTTCCAACCAACCACTGGAAAGCCATaGGAGAGTAGTCAGAACAGC +
Preference number: 5 (lower is better)
Translates to: VRFNQRFSRRSHLAHFQPTTGKP*ESSQNS
Trigger: GCTGTTCTGACTACTCTCCAATGGCTTTCCAGTGGT...TGGTTGGAAGTGTGCCAGATGCGACCTGCGAGAAAACCTCTGGTTGAATCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680276.1
CDS TCA 90 bp AGCCGATGCGGTTCCTCTTGTGCTCCTCCTTCATCACCTGTTCAATaGGTTCAGATTTCACCGGAGGCTTTGAATACTGGCCTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: SRCGSSCAPPSSPVQ*VQISPEALNTGLRE
Trigger: TTCTCTCAGGCCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGAGGAGCACAAGAGGAACCGCATCGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680217.1
CDS TCA 90 bp CTGGGCATCTTGCTGCCTTGTGCTCCTCCTTCATCACCTGTTCAATaGGTTCAGATTTCACCGGAGGCTTTGAATACTGGCCTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: LGILLPCAPPSSPVQ*VQISPEALNTGLRE
Trigger: TTCTCTCAGGCCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGAGGAGCACAAGGCAGCAAGATGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680853.1
CDS-3UTR CAA 90 bp GACCCTCAGCTTGATGTCATTGTCCTGGAGCCCATTCTCTGTCCCATGCATATGAGCTGGGTGAGGTTGTaGGCATATTTAGATACTGGC +
Preference number: 5 (lower is better)
Translates to: DPQLDVIVLEPILCPMHMSWVRL*AYLDTG
Trigger: GCCAGTATCTAAATATGCCAACAACCTCACCCAGCT...CATATGCATGGGACAGAGAATGGGCTCCAGGACAATGACATCAAGCTGAGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679783.1
CDS-3UTR CAA 90 bp GTCAGTCAGATTCAACCAGAGGTTTTCTCGCAGGTCGCATCTGGCACACTTCCAAGCTGGGTGAGGTTGTaGGCATATTTAGATACTGGC +
Preference number: 5 (lower is better)
Translates to: VSQIQPEVFSQVASGTLPSWVRL*AYLDTG
Trigger: GCCAGTATCTAAATATGCCAACAACCTCACCCAGCT...TGGAAGTGTGCCAGATGCGACCTGCGAGAAAACCTCTGGTTGAATCTGACTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CAA 90 bp AGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGTTGGCATATTTAGATACGGAATCCTGACTCCATaGTCCAGCTGGGTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: RNPDSIVQLGEVVGIFRYGILTP*SSWVRL
Trigger: CAACCTCACCCAGCTGGACAATGGAGTCAGGATTCC...GTATCTAAATATGCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497380.1
ENST00000679350.1
ENST00000681128.1
CDS-3UTR CAA 90 bp AGAAGGCCATGTCCTAACTTAGTCATCTGTGTGTTGAAATCTTGTGTTGGATCTTCCAGCGCATGCCCGTaGCCCCCAGAGCTGTCAAAG +
Preference number: 5 (lower is better)
Translates to: RRPCPNLVICVLKSCVGSSSACP*PPELSK
Trigger: CTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGA...AGATCCAACACAAGATTTCAACACACAGATGACTAAGTTAGGACATGGCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680436.1
CDS-3UTR CAA 90 bp GTTTCCTACATACGCTCTCTGGAATTCTGGGATGCTGAAGATGGCCTGCATGACCTCAGCTTGATGTCATaGTCCTGGAGCCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: VSYIRSLEFWDAEDGLHDLSLMS*SWSPFS
Trigger: AGAGAATGGGCTCCAGGACAATGACATCAAGCTGAG...GTCATGCAGGCCATCTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679783.1
ENST00000680651.1
ENST00000681649.1
CDS-3UTR CAA 90 bp CAGGCCAGAGAAAAGGTGGCAAAATGTCCTGAAGCAATAAAGATGGGCTTCGCATCACTGACCCTCAGCTaGATGTCATTGTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: QAREKVAKCPEAIKMGFASLTLS*MSLSWS
Trigger: GCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGA...TGCGAAGCCCATCTTTATTGCTTCAGGACATTTTGCCACCTTTTCTCTGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS-3UTR CAA 90 bp AAGGTTTCCTACATACGCTCTCTGGAATTCTGGGATGCTGAAGATGGCCTGCATTCACTGACCCTCAGCTaGATGTCATTGTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: KVSYIRSLEFWDAEDGLHSLTLS*MSLSWS
Trigger: GCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGA...ATGCAGGCCATCTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGGAAACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000680651.1
ENST00000681649.1
CDS-3UTR CAA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCTTAGTCATCTGTGTGTaGAAATCTTGTGTTGGATCT +
Preference number: 5 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSLVICV*KSCVGS
Trigger: AGATCCAACACAAGATTTCAACACACAGATGACTAA...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGAATTCCGGGTGGCTCTaGCTTACAAAGGCCTTAAAC +
Preference number: 5 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMNSGWL*LTKALN
Trigger: GTTTAAGGCCTTTGTAAGCAAGAGCCACCCGGAATT...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GGTATCTTGGCACGTACCAACTCAGGAAGGGGTCTTCTGTTTGCTTCTGCTTCCAACGAAAAACATCGCTaGGGTTTTCTGAGCCGATGC +
Preference number: 5 (lower is better)
Translates to: GILARTNSGRGLLFASASNEKHR*GFLSRC
Trigger: GCATCGGCTCAGAAAACCCAAGCGATGTTTTTCGTT...GGAAGCAGAAGCAAACAGAAGACCCCTTCCTGAGTTGGTACGTGCCAAGATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
CDS-3UTR CAA 90 bp CATATATATGTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGTTCATCCTTGTTGGTaGCCGCCTCCATGGCCACAG +
Preference number: 5 (lower is better)
Translates to: HIYVQPSESPNRTLSSQAVHPCW*PPPWPQ
Trigger: CTGTGGCCATGGAGGCGGCAACCAACAAGGATGAAC...TGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATATATATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp ACACCCGCAGACTTTGCTTGTAGGGCACTGCTCCAGAAATCATCAACATTTTCTGCGATCAGTTCATCCTaGTTGGTTGCCGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: TPADFACRALLQKSSTFSAISSS*LVAASM
Trigger: CATGGAGGCGGCAACCAACAAGGATGAACTGATCGC...AGAAAATGTTGATGATTTCTGGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680853.1
CDS-3UTR CAA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGGCACTAAATGGTATCTaGGCACGTACCAACTCAGGA +
Preference number: 5 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQALNGI*ARTNSG
Trigger: TCCTGAGTTGGTACGTGCCAAGATACCATTTAGTGC...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GAAGCAAAGCGAGATGTTTTCACACCCGCAGACTTTGCTTGTAGGGCACTGCTCGCACTAAATGGTATCTaGGCACGTACCAACTCAGGA +
Preference number: 5 (lower is better)
Translates to: EAKRDVFTPADFACRALLALNGI*ARTNSG
Trigger: TCCTGAGTTGGTACGTGCCAAGATACCATTTAGTGC...GAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGAAAACATCTCGCTTTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
CDS-3UTR CAA 90 bp ATCACTGTCTTCTTCAAACTCAGGGTGGCTAAAGATCCAATCCAGTGCTCTTTCGTGAAGTACACAGCCTaGCGACATGCTTCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: ITVFFKLRVAKDPIQCSFVKYTA*RHASSG
Trigger: CCCGCTGGAAGCATGTCGCAAGGCTGTGTACTTCAC...GAAAGAGCACTGGATTGGATCTTTAGCCACCCTGAGTTTGAAGAAGACAGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680905.1
ENST00000681098.1
ENST00000681362.1
CDS-3UTR CAA 90 bp AGGCACAGGACGGATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCAGATACTTTGCAGAATaGCGTTTCCTATTTACGGAT +
Preference number: 5 (lower is better)
Translates to: RHRTDEGLAQGPQSARSSRYFAE*RFLFTD
Trigger: ATCCGTAAATAGGAAACGCAATTCTGCAAAGTATCT...GCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATCCGTCCTGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GATGAAGGACTTGCCCAAGGTCCACAGTCAGCTAGGAGCAGCACCCAGGTCTCCAGATACTTTGCAGAATaGCGTTTCCTATTTACGGAT +
Preference number: 5 (lower is better)
Translates to: DEGLAQGPQSARSSTQVSRYFAE*RFLFTD
Trigger: ATCCGTAAATAGGAAACGCAATTCTGCAAAGTATCT...GGAGACCTGGGTGCTGCTCCTAGCTGACTGTGGACCTTGGGCAAGTCCTTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGCAAGAGTGGCAGGATTaGTGCAGTGTTTCAACACAC +
Preference number: 5 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMQEWQD*CSVSTH
Trigger: GTGTGTTGAAACACTGCACAAATCCTGCCACTCTTG...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp CACACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTATTCCAGATCCATCCTaGACTCTAGGTCCTTCGGGC +
Preference number: 5 (lower is better)
Translates to: HTWSWKHPVNERLSRSSFIPDPS*TLGPSG
Trigger: GCCCGAAGGACCTAGAGTCAAGGATGGATCTGGAAT...AAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp AAGGTTTCCTACATACGCTCTCTGGAATTCTGGGATGCTGAAGATGGCCTGCATCTCAGCTTGATGTCATaGTCCTGGAGCCCATTCTCC +
Preference number: 5 (lower is better)
Translates to: KVSYIRSLEFWDAEDGLHLSLMS*SWSPFS
Trigger: GGAGAATGGGCTCCAGGACAATGACATCAAGCTGAG...ATGCAGGCCATCTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGGAAACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680307.1
CDS TCA 90 bp CAAGAAGTGACACCGCCTTGTGCTCCTCCTTCATCACCTGTTCAATaGGTTCAGATTTCACCGGAGGCTTTGAATACTGGCCTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: QEVTPPCAPPSSPVQ*VQISPEALNTGLRE
Trigger: TTCTCTCAGGCCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGAGGAGCACAAGGCGGTGTCACTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681836.1
CDS GCA 90 bp CCTCGAGTTCTTGCAGGTCTGGGTCTGCTTCTGCAGTCAGTCTGTTaGGATATCATGCACCATGTAGTCTCTGGAAAATTCCATTCCAGA +
Preference number: 5 (lower is better)
Translates to: PRVLAGLGLLLQSVC*DIMHHVVSGKFHSR
Trigger: TCTGGAATGGAATTTTCCAGAGACTACATGGTGCATGATATCGCAACAGACTGACTGCAGAAGCAGACCCAGACCTGCAAGAACTCGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS GCA 90 bp CCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTCCCTCGAGTTCTTaGAGGTCTGGGTCTGCTTCTGCAGTCAGTCTGTTGCGATATCAT +
Preference number: 5 (lower is better)
Translates to: PVNERLSRSSFPSSS*RSGSASAVSLLRYH
Trigger: ATGATATCGCAACAGACTGACTGCAGAAGCAGACCCAGACCTGCAAGAACTCGAGGGAAAGGAAGATCTTGAAAGCCTCTCATTCACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp CCACTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGTTGGCATATTCCAGCTGGGTGAGGTaGTTGGCATATTTAGATACT +
Preference number: 5 (lower is better)
Translates to: PLGGILTPLSSWVRLLAYSSWVR*LAYLDT
Trigger: AGTATCTAAATATGCCAACAACCTCACCCAGCTGGA...ATATGCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497380.1
ENST00000679350.1
ENST00000681128.1
CDS-3UTR CAA 90 bp AGTCAGATTCAACCAGAGGTTTTCTCGCAGGTCGCATCTGGCACACTTCCAACCTCCAGCTGGGTGAGGTaGTTGGCATATTTAGATACT +
Preference number: 5 (lower is better)
Translates to: SQIQPEVFSQVASGTLPTSSWVR*LAYLDT
Trigger: AGTATCTAAATATGCCAACAACCTCACCCAGCTGGA...GGTTGGAAGTGTGCCAGATGCGACCTGCGAGAAAACCTCTGGTTGAATCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CAA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTATCCAGCGCATGCCCGTaGCCCCCAGAGCTGTCAAAG +
Preference number: 5 (lower is better)
Translates to: VVDNFVSTYLGITALAKLSSACP*PPELSK
Trigger: CTTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGA...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp ACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTCCCATTTCACCGGAGGCTTaGAATACTGGCCTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: TWSWKHPVNERLSRSSFPISPEA*NTGLRE
Trigger: TTCTCTCAGGCCAGTATTCAAAGCCTCCGGTGAAAT...GGGAAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp CTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTCGCGATCAGTTCATCCTaGTTGGTTGCCGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: LESFDEVSSTILFLSKSLAISSS*LVAASM
Trigger: CATGGAGGCGGCAACCAACAAGGATGAACTGATCGC...GAGGGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp ACACCCGCAGACTTTGCTTGTAGGGCACTGCTCCAGAAATCATCAACATTTTCTGAAGGGGTCTTCTGTTaGCTTCTGCTTCCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: TPADFACRALLQKSSTFSEGVFC*LLLPFS
Trigger: CGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTC...AGAAAATGTTGATGATTTCTGGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
CDS-3UTR CAA 90 bp ACTTGGAGCTGGAAGCACCCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTCCCGCACTAAATGGTATCTaGGCACGTACCAACTCAGGA +
Preference number: 5 (lower is better)
Translates to: TWSWKHPVNERLSRSSFPALNGI*ARTNSG
Trigger: TCCTGAGTTGGTACGTGCCAAGATACCATTTAGTGC...GGGAAAGGAAGATCTTGAAAGCCTCTCATTCACTGGGTGCTTCCAGCTCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGGTTCCAGATCCATCCTaGACTCTAGGTCCTTCGGGC +
Preference number: 5 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWVPDPS*TLGPSG
Trigger: GCCCGAAGGACCTAGAGTCAAGGATGGATCTGGAAC...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGTGTAGAAATAGCCCTTaGTGTTGTGGGGCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQCRNSP*CCGAEE
Trigger: TTCTTCTGCCCCACAACACAAAGGGCTATTTCTACA...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp TGTTTCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCAACCATTACCACACACTaGGAGCTGGAAGCACCCAGT +
Preference number: 5 (lower is better)
Translates to: CFSPNPSETITTHLELEATITTH*ELEAPS
Trigger: ACTGGGTGCTTCCAGCTCCAAGTGTGTGGTAATGGT...TGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
CDS-3UTR CAA 90 bp CTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTCCTTTCCCTCGAGTTCTaGCAGGTCTGGGTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: LESFDEVSSTILFLSKSLLSLEF*QVWVCF
Trigger: GAAGCAGACCCAGACCTGCAAGAACTCGAGGGAAAG...GAGGGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS TCA 90 bp GCTACCCATTGTCCTACCAGGTTGCATGTGAAGATCATGGCAGGCTaGCCCTTGCTGACTCTAATTACTCCTCTAACAATCGGCAAAACA +
Preference number: 5 (lower is better)
Translates to: ATHCPTRLHVKIMAG*PLLTLITPLTIGKT
Trigger: TGTTTTGCCGATTGTTAGAGGAGTAATTAGAGTCAGCAAGGGTCAGCCTGCCATGATCTTCACATGCAACCTGGTAGGACAATGGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679752.1
CDS GCA 90 bp CCAGTGAATGAGAGGCTTTCAAGATCTTCCTTTCCCTCGAGTTCTTaGAGGTCTGGGTCTATGAGAGAAAACTGCTTCTGCAGTCAGTCT +
Preference number: 5 (lower is better)
Translates to: PVNERLSRSSFPSSS*RSGSMRENCFCSQS
Trigger: AGACTGACTGCAGAAGCAGTTTTCTCTCATAGACCCAGACCTGCAAGAACTCGAGGGAAAGGAAGATCTTGAAAGCCTCTCATTCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602704.2
CDS CCA 90 bp TCTGGAAGTTCTTCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATaGTTGATATCAAGTAGGTCTGGCATATCAATAGAAACATCCTTG +
Preference number: 5 (lower is better)
Translates to: SGSSSSPGCNPLARR*LISSRSGISIETSL
Trigger: CAAGGATGTTTCTATTGATATGCCAGACCTACTTGATATCAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGAAGAACTTCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680951.1
CDS-3UTR CAA 90 bp GTCAAAGAACCACTTTCCACACAGGACAGAGCCGTCAGTCAGATTCAACCAGAGTCCAGCTGGGTGAGGTaGTTGGCATATTTAGATACT +
Preference number: 5 (lower is better)
Translates to: VKEPLSTQDRAVSQIQPESSWVR*LAYLDT
Trigger: AGTATCTAAATATGCCAACAACCTCACCCAGCTGGA...CTCTGGTTGAATCTGACTGACGGCTCTGTCCTGTGTGGAAAGTGGTTCTTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679350.1
ENST00000680276.1
ENST00000681128.1
ENST00000681299.1
CDS-3UTR CAA 90 bp TGTTTCTCTCCAAATCCCTCTGAAACCATTACCACACACTTGGAGCTGGAAGCACTCAGCTTGATGTCATaGTCCTGGAGCCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: CFSPNPSETITTHLELEALSLMS*SWSPFS
Trigger: AGAGAATGGGCTCCAGGACAATGACATCAAGCTGAG...TGCTTCCAGCTCCAAGTGTGTGGTAATGGTTTCAGAGGGATTTGGAGAGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp CTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTCTCACTGACCCTCAGCTaGATGTCATTGTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: LESFDEVSSTILFLSKSLSLTLS*MSLSWS
Trigger: GCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGA...GAGGGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp GTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCAGGGGAGCAGTTAGTCATCTGTGTGTaGAAATCTTGTGTTGGATCT +
Preference number: 5 (lower is better)
Translates to: VQPSESPNRTLSSQAGEQLVICV*KSCVGS
Trigger: AGATCCAACACAAGATTTCAACACACAGATGACTAA...CTGCTCCCCTGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp AAACTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCCGTTCTGCTGTGGCTaGTGCTCCTCCTTCATCACC +
Preference number: 5 (lower is better)
Translates to: KLESFDEVSSTILFLSKSPFCCG*CSSFIT
Trigger: GGTGATGAAGGAGGAGCACAAGCCACAGCAGAACGG...GGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp AGAAGGCCATGTCCTAACTTAGTCATCTGTGTGTTGAAATCTTGTGTTGGATCTCCGTTCTGCTGTGGCTaGTGCTCCTCCTTCATCACC +
Preference number: 5 (lower is better)
Translates to: RRPCPNLVICVLKSCVGSPFCCG*CSSFIT
Trigger: GGTGATGAAGGAGGAGCACAAGCCACAGCAGAACGG...AGATCCAACACAAGATTTCAACACACAGATGACTAAGTTAGGACATGGCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR CAA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGGAAGGGGTCTTCTGTTaGCTTCTGCTTCCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWEGVFC*LLLPFS
Trigger: CGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTC...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp CTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTCGAAGGGGTCTTCTGTTaGCTTCTGCTTCCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: LESFDEVSSTILFLSKSLEGVFC*LLLPFS
Trigger: CGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTC...GAGGGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp CAGGAAGGGGTCTTCTGTTTGCTTCTGCTTCCCTTCTCGTTAGTTCATAAGCGAGCACTAAATGGTATCTaGGCACGTACCAACTCAGGA +
Preference number: 5 (lower is better)
Translates to: QEGVFCLLLLPFSLVHKRALNGI*ARTNSG
Trigger: TCCTGAGTTGGTACGTGCCAAGATACCATTTAGTGC...TCGCTTATGAACTAACGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
CDS-3UTR CAA 90 bp AAACTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCGTGAAGTACACAGCCTaGCGACATGCTTCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: KLESFDEVSSTILFLSKSVKYTA*RHASSG
Trigger: CCCGCTGGAAGCATGTCGCAAGGCTGTGTACTTCAC...GGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp TTCAGAGAAGGCCTGAAGGCAGGCACTAAATGGTATCTTGGCACGTACCAACTCAGCAAATCAAAGACCTaGCAATCGCTCTTACCCCTT +
Preference number: 5 (lower is better)
Translates to: FREGLKAGTKWYLGTYQLSKSKT*QSLLPL
Trigger: AAGGGGTAAGAGCGATTGCAAGGTCTTTGATTTGCT...GAGTTGGTACGTGCCAAGATACCATTTAGTGCCTGCCTTCAGGCCTTCTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681560.1
CDS CCA 90 bp TCTGGAAGTTCTTCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATaGTTGATATCAAGTAGGTCTGGCATATCAATAGAAACATTTCAC +
Preference number: 5 (lower is better)
Translates to: SGSSSSPGCNPLARR*LISSRSGISIETFH
Trigger: GTGAAATGTTTCTATTGATATGCCAGACCTACTTGATATCAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGAAGAACTTCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680167.1
CDS-3UTR CAA 90 bp AGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGTTGGCATATTTAGATACAGCTGGGTGAGGTTGTaGGCATATTTAGATACTGGC +
Preference number: 5 (lower is better)
Translates to: RNPDSIVQLGEVVGIFRYSWVRL*AYLDTG
Trigger: GCCAGTATCTAAATATGCCAACAACCTCACCCAGCT...GTATCTAAATATGCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497380.1
ENST00000679350.1
ENST00000681128.1
CDS-3UTR CAA 90 bp AAACTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCGGAATCCTGACTCCATaGTCCAGCTGGGTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: KLESFDEVSSTILFLSKSGILTP*SSWVRL
Trigger: CAACCTCACCCAGCTGGACAATGGAGTCAGGATTCC...GGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp GATCTAAAGGCGAGTAGTCAAATATTCTGGGAAGGTTTCCTACATACGCTCTCTTCACTGACCCTCAGCTaGATGTCATTGTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: DLKASSQIFWEGFLHTLSSLTLS*MSLSWS
Trigger: GCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGA...AGAGAGCGTATGTAGGAAACCTTCCCAGAATATTTGACTACTCGCCTTTAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679783.1
ENST00000680307.1
ENST00000680651.1
ENST00000681649.1
CDS-3UTR CAA 90 bp TTTTCACACCCGCAGACTTTGCTTGTAGGGCACTGCTCCAGAAATCATCAACATATTTCACCGGAGGCTTaGAATACTGGCCTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: FSHPQTLLVGHCSRNHQHISPEA*NTGLRE
Trigger: TTCTCTCAGGCCAGTATTCAAAGCCTCCGGTGAAAT...ATGTTGATGATTTCTGGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680853.1
CDS-3UTR CAA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGCCGTTCTGCTGTGGCTaGTGCTCCTCCTTCATCACC +
Preference number: 5 (lower is better)
Translates to: KITDKFGALDMTPKSYHVPFCCG*CSSFIT
Trigger: GGTGATGAAGGAGGAGCACAAGCCACAGCAGAACGG...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp AACGAAAAACATCGCTTGGGTTTTCTGAGCCGATGCGGTTCCTCTCTACTAGATAATTCCGGGTGGCTCTaGCTTACAAAGGCCTTAAAC +
Preference number: 5 (lower is better)
Translates to: NEKHRLGFLSRCGSSLLDNSGWL*LTKALN
Trigger: GTTTAAGGCCTTTGTAAGCAAGAGCCACCCGGAATT...ATCTAGTAGAGAGGAACCGCATCGGCTCAGAAAACCCAAGCGATGTTTTTCGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR CAA 90 bp ACTAAATGGTATCTTGGCACGTACCAACTCAGGAAGGGGTCTTCTGTTTGCTTCAACGAAAAACATCGCTaGGGTTTTCTGAGCCGATGC +
Preference number: 5 (lower is better)
Translates to: TKWYLGTYQLRKGSSVCFNEKHR*GFLSRC
Trigger: GCATCGGCTCAGAAAACCCAAGCGATGTTTTTCGTT...GAAGCAAACAGAAGACCCCTTCCTGAGTTGGTACGTGCCAAGATACCATTTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680853.1
ENST00000681560.1
CDS-3UTR CAA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTATCACACCCGCAGACTTaGCTTGTAGGGCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: VVDNFVSTYLGITALAKLSHPQT*LVGHCS
Trigger: GGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGA...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GGTCCTTCGGGCTTGGCCTCAGAAATAATGTTTGCATTGGCATTATTCTCCATCCTAGGTCCTTCGGGCTaGGCCTCAGAAATAATGTTT +
Preference number: 5 (lower is better)
Translates to: GPSGLASEIMFALALFSILGPSG*ASEIMF
Trigger: AAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAG...GATGGAGAATAATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680905.1
ENST00000681098.1
ENST00000681362.1
CDS-3UTR CAA 90 bp TGCCTGAATAGCCTGATTTCGCTGAAATCCCATGGAGGTGATGATAGCTACGATCTAGGTCCTTCGGGCTaGGCCTCAGAAATAATGTTT +
Preference number: 5 (lower is better)
Translates to: CLNSLISLKSHGGDDSYDLGPSG*ASEIMF
Trigger: AAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAG...ATCGTAGCTATCATCACCTCCATGGGATTTCAGCGAAATCAGGCTATTCAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680905.1
ENST00000681098.1
CDS-3UTR CAA 90 bp GTCTTCTTCAAACTCAGGGTGGCTAAAGATCCAATCCAGTGCTCTTTCCAGGTTCTAGGTCCTTCGGGCTaGGCCTCAGAAATAATGTTT +
Preference number: 5 (lower is better)
Translates to: VFFKLRVAKDPIQCSFQVLGPSG*ASEIMF
Trigger: AAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAG...AACCTGGAAAGAGCACTGGATTGGATCTTTAGCCACCCTGAGTTTGAAGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680905.1
ENST00000681098.1
ENST00000681362.1
CDS-3UTR CAA 90 bp TCCAGATCCATCCTTGACTCTAGGTCCTTCGGGCTTGGCCTCAGAAATAATGTTTGTAATGACCACTCATaGTGGATGTTCCCATGTGAC +
Preference number: 5 (lower is better)
Translates to: SRSILDSRSFGLGLRNNVCNDHS*WMFPCD
Trigger: GTCACATGGGAACATCCACAATGAGTGGTCATTACA...AACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAAGGATGGATCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681362.1
CDS-3UTR CAA 90 bp AAAGGCCCAGAGAGGTACAGTGATTCAGTCCCACCTCACTTAGAGTGGAGTCAGACCACATTCTACTCATaGAAGGTTCACTGTAACCAA +
Preference number: 5 (lower is better)
Translates to: KGPERYSDSVPPHLEWSQTTFYS*KVHCNQ
Trigger: TTGGTTACAGTGAACCTTCAATGAGTAGAATGTGGT...CTGACTCCACTCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS TCA 90 bp TTTCAAGATCTTCCTTTCCCTCGAGTTCTTGCAGGTCTGGGTCTATaGGAGAAAACTGCTTCTGCAGTCAGTCTGTTGCGATATCATGCA +
Preference number: 5 (lower is better)
Translates to: FQDLPFPRVLAGLGL*EKTASAVSLLRYHA
Trigger: TGCATGATATCGCAACAGACTGACTGCAGAAGCAGTTTTCTCTCATAGACCCAGACCTGCAAGAACTCGAGGGAAAGGAAGATCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602704.2
CDS GCA 90 bp TCTACAGGCCTAAAAGCCTGTTCCTTAAACCTCACAGAAAGTTACTaGAGGCCTATAGATACATCTGGCAATCACAGGAAGCAAGCAGCT +
Preference number: 5 (lower is better)
Translates to: STGLKACSLNLTESY*RPIDTSGNHRKQAA
Trigger: AGCTGCTTGCTTCCTGTGATTGCCAGATGTATCTATAGGCCTGCAGTAACTTTCTGTGAGGTTTAAGGAACAGGCTTTTAGGCCTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679752.1
CDS CCA 90 bp TTCCTTAAACCTCACAGAAAGTTACTGCAGGCCTATAGATACATCTaGCAATCACAGGAAGCAAGCAGCTCTGGAAAACGGAGAGTGCAA +
Preference number: 5 (lower is better)
Translates to: FLKPHRKLLQAYRYI*QSQEASSSGKRRVQ
Trigger: TTGCACTCTCCGTTTTCCAGAGCTGCTTGCTTCCTGTGATTGCCAGATGTATCTATAGGCCTGCAGTAACTTTCTGTGAGGTTTAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679752.1
CDS-3UTR CAA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGGGAATCCTGACTCCATaGTCCAGCTGGGTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: KITDKFGALDMTPKSYHVGILTP*SSWVRL
Trigger: CAACCTCACCCAGCTGGACAATGGAGTCAGGATTCC...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTAAGCCAGGACCATACATaGGCTTCAGTTTCGTGCCCG +
Preference number: 5 (lower is better)
Translates to: VVDNFVSTYLGITALAKLSQDHT*ASVSCP
Trigger: CGGGCACGAAACTGAAGCCAATGTATGGTCCTGGCT...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGATTTCACCGGAGGCTTaGAATACTGGCCTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWISPEA*NTGLRE
Trigger: TTCTCTCAGGCCAGTATTCAAAGCCTCCGGTGAAAT...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp TTCATCACCTGTTCAATGAGTTCAGATTTCACCGGAGGCTTTGAATACTGGCCTATTTCACCGGAGGCTTaGAATACTGGCCTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: FITCSMSSDFTGGFEYWPISPEA*NTGLRE
Trigger: TTCTCTCAGGCCAGTATTCAAAGCCTCCGGTGAAAT...AGGCCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680031.1
ENST00000680436.1
ENST00000681051.1
CDS-3UTR CAA 90 bp TCCTTCATCACCTGTTCAATGAGTTCAGATTTCACCGGAGGCTTTGAATACTGGAATTCCGGGTGGCTCTaGCTTACAAAGGCCTTAAAC +
Preference number: 5 (lower is better)
Translates to: SFITCSMSSDFTGGFEYWNSGWL*LTKALN
Trigger: GTTTAAGGCCTTTGTAAGCAAGAGCCACCCGGAATT...CCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR CAA 90 bp TCCTTCATCACCTGTTCAATGAGTTCAGATTTCACCGGAGGCTTTGAATACTGGAACGAAAAACATCGCTaGGGTTTTCTGAGCCGATGC +
Preference number: 5 (lower is better)
Translates to: SFITCSMSSDFTGGFEYWNEKHR*GFLSRC
Trigger: GCATCGGCTCAGAAAACCCAAGCGATGTTTTTCGTT...CCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR CAA 90 bp AAACTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCCTGGCTCGGAGATGGTaGATATCAAGTAGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: KLESFDEVSSTILFLSKSLARRW*ISSRSG
Trigger: GCCAGACCTACTTGATATCAACCATCTCCGAGCCAG...GGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp TTGCAGAGGCTCTATTATGGACAGAGCATAATATCTACATGGATACATCAGAAAGTGAAGTACACAGCCTaGCGACATGCTTCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: LQRLYYGQSIISTWIHQKVKYTA*RHASSG
Trigger: CCCGCTGGAAGCATGTCGCAAGGCTGTGTACTTCAC...TTTCTGATGTATCCATGTAGATATTATGCTCTGTCCATAATAGAGCCTCTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp CATATATATGTACAACCTTCTGAGTCCCCCAACAGGACTCTGAGTTCACAAGCACTAGGTCCTTCGGGCTaGGCCTCAGAAATAATGTTT +
Preference number: 5 (lower is better)
Translates to: HIYVQPSESPNRTLSSQALGPSG*ASEIMF
Trigger: AAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAG...TGCTTGTGAACTCAGAGTCCTGTTGGGGGACTCAGAAGGTTGTACATATATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp ATGGGCCTTAGACACCATGTCTCTCGGTCACATGGCACCAAAGGATCACCTATGAAAATCTGGTGTGTATaGTATGTGTACAACACAGTC +
Preference number: 5 (lower is better)
Translates to: MGLRHHVSRSHGTKGSPMKIWCV*YVYNTV
Trigger: GACTGTGTTGTACACATACAATACACACCAGATTTT...CATAGGTGATCCTTTGGTGCCATGTGACCGAGAGACATGGTGTCTAAGGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp AAACTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCACCATTACCACACACTaGGAGCTGGAAGCACCCAGT +
Preference number: 5 (lower is better)
Translates to: KLESFDEVSSTILFLSKSTITTH*ELEAPS
Trigger: ACTGGGTGCTTCCAGCTCCAAGTGTGTGGTAATGGT...GGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602704.2
ENST00000680008.1
CDS-3UTR CAA 90 bp TTAATTCTTCATTCAATCAGTTATTTGCTGATCACTCACCATGGGCCAGGCACAATTCCAGATCCATCCTaGACTCTAGGTCCTTCGGGC +
Preference number: 5 (lower is better)
Translates to: LILHSISYLLITHHGPGTIPDPS*TLGPSG
Trigger: GCCCGAAGGACCTAGAGTCAAGGATGGATCTGGAAT...TGTGCCTGGCCCATGGTGAGTGATCAGCAAATAACTGATTGAATGAAGAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679769.1
CDS-3UTR CAA 90 bp TTGCAGAGGCTCTATTATGGACAGAGCATAATATCTACATGGATACATCAGAAAATCAGTTCATCCTTGTaGGTTGCCGCCTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: LQRLYYGQSIISTWIHQKISSSL*VAASMA
Trigger: GGCCATGGAGGCGGCAACCAACAAGGATGAACTGAT...TTTCTGATGTATCCATGTAGATATTATGCTCTGTCCATAATAGAGCCTCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp TTGCAGAGGCTCTATTATGGACAGAGCATAATATCTACATGGATACATCAGAAAGCGATCAGTTCATCCTaGTTGGTTGCCGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: LQRLYYGQSIISTWIHQKAISSS*LVAASM
Trigger: CATGGAGGCGGCAACCAACAAGGATGAACTGATCGC...TTTCTGATGTATCCATGTAGATATTATGCTCTGTCCATAATAGAGCCTCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GCTCGGAGATGGTTGATATCAAGTAGGTCTGGCATATCAATAGAAACATCAAATGAAGGGGTCTTCTGTTaGCTTCTGCTTCCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: ARRWLISSRSGISIETSNEGVFC*LLLPFS
Trigger: CGAGAAGGGAAGCAGAAGCAAACAGAAGACCCCTTC...ATTTGATGTTTCTATTGATATGCCAGACCTACTTGATATCAACCATCTCCGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679954.1
CDS-3UTR CAA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTACTGGCTCGGAGATGGTaGATATCAAGTAGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: VVDNFVSTYLGITALAKLLARRW*ISSRSG
Trigger: GCCAGACCTACTTGATATCAACCATCTCCGAGCCAG...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp TTGCAGAGGCTCTATTATGGACAGAGCATAATATCTACATGGATACATCAGAAAGTTCCAGATCCATCCTaGACTCTAGGTCCTTCGGGC +
Preference number: 5 (lower is better)
Translates to: LQRLYYGQSIISTWIHQKVPDPS*TLGPSG
Trigger: GCCCGAAGGACCTAGAGTCAAGGATGGATCTGGAAC...TTTCTGATGTATCCATGTAGATATTATGCTCTGTCCATAATAGAGCCTCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTATGGAATTCCTCCTTTTaGGTAACGCTCCACCAGACG +
Preference number: 5 (lower is better)
Translates to: VVDNFVSTYLGITALAKLWNSSF*VTLHQT
Trigger: CGTCTGGTGGAGCGTTACCAAAAAGGAGGAATTCCA...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp AAACTGGAGTCGTTTGATGAGGTAAGTTCGACTATTCTGTTTCTCTCCAAATCCAGCTGGGTGAGGTTGTaGGCATATTTAGATACTGGC +
Preference number: 5 (lower is better)
Translates to: KLESFDEVSSTILFLSKSSWVRL*AYLDTG
Trigger: GCCAGTATCTAAATATGCCAACAACCTCACCCAGCT...GGATTTGGAGAGAAACAGAATAGTCGAACTTACCTCATCAAACGACTCCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS-3UTR CAA 90 bp TTGCTGCCTGTTAGAGGAGAATTCCGGGTGGCTCTTGCTTACAAAGGCCTTAAATTAGTCATCTGTGTGTaGAAATCTTGTGTTGGATCT +
Preference number: 5 (lower is better)
Translates to: LLPVRGEFRVALAYKGLKLVICV*KSCVGS
Trigger: AGATCCAACACAAGATTTCAACACACAGATGACTAA...TTTAAGGCCTTTGTAAGCAAGAGCCACCCGGAATTCTCCTCTAACAGGCAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680031.1
ENST00000681051.1
CDS-3UTR CAA 90 bp TTAATTCTTCATTCAATCAGTTATTTGCTGATCACTCACCATGGGCCAGGCACACTAGGTCCTTCGGGCTaGGCCTCAGAAATAATGTTT +
Preference number: 5 (lower is better)
Translates to: LILHSISYLLITHHGPGTLGPSG*ASEIMF
Trigger: AAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAG...TGTGCCTGGCCCATGGTGAGTGATCAGCAAATAACTGATTGAATGAAGAATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679769.1
CDS-3UTR CAA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTAACCAGTGGGCACACTTaGGTAGAAAAGTACTGCACC +
Preference number: 5 (lower is better)
Translates to: VVDNFVSTYLGITALAKLTSGHT*VEKYCT
Trigger: GGTGCAGTACTTTTCTACCAAAGTGTGCCCACTGGT...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGGAAAACAAGCCATTTTaGACGTGGGTTTGGAGTCAT +
Preference number: 5 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWENKPF*TWVWSH
Trigger: ATGACTCCAAACCCACGTCAAAAATGGCTTGTTTTC...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS TCA 90 bp AGCATTCTCAAGACCTCTATGACAGCCTCTCCTATGACTGAAACTTaGACAGAAAGCTCTATCTACAGGCCTAAAAGCCTGTTCCTTAAA +
Preference number: 5 (lower is better)
Translates to: SILKTSMTASPMTET*TESSIYRPKSLFLK
Trigger: TTTAAGGAACAGGCTTTTAGGCCTGTAGATAGAGCTTTCTGTTCAAGTTTCAGTCATAGGAGAGGCTGTCATAGAGGTCTTGAGAATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679752.1
CDS-3UTR CAA 90 bp GTGGTAGACAATTTTGTCAGCACTTATTTGGGGATCACAGCTCTAGCTAAATTAATTTCACCGGAGGCTTaGAATACTGGCCTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: VVDNFVSTYLGITALAKLISPEA*NTGLRE
Trigger: TTCTCTCAGGCCAGTATTCAAAGCCTCCGGTGAAAT...TAATTTAGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAAATTGTCTACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGCTAGGTCCTTCGGGCTaGGCCTCAGAAATAATGTTT +
Preference number: 5 (lower is better)
Translates to: KITDKFGALDMTPKSYHVLGPSG*ASEIMF
Trigger: AAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAG...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGAAGTGGGCTTTTCATTaGTTGTGGGTAAGGCCACAC +
Preference number: 5 (lower is better)
Translates to: KITDKFGALDMTPKSYHVKWAFH*LWVRPH
Trigger: GTGTGGCCTTACCCACAACAAATGAAAAGCCCACTT...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGCCCAATGTCTGTGCTTaGTTTCACCTGGTTGGTTCT +
Preference number: 5 (lower is better)
Translates to: KITDKFGALDMTPKSYHVPNVCA*FHLVGS
Trigger: AGAACCAACCAGGTGAAACAAAGCACAGACATTGGG...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGATAGGGGAACCTGCCTaGTATATATTGAGATACACA +
Preference number: 5 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWIGEPA*YILRYT
Trigger: TGTGTATCTCAATATATACAAGGCAGGTTCCCCTAT...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGCAAGAGTGGCAGGATTaGTGCAGTGTTTCAACACAC +
Preference number: 5 (lower is better)
Translates to: KITDKFGALDMTPKSYHVQEWQD*CSVSTH
Trigger: GTGTGTTGAAACACTGCACAAATCCTGCCACTCTTG...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp ATTCCAGAACAAGGCATTGTTATCATAGGAGATGACAGGTCCATGCATGTTATTGGTCCATGCATGTTATaGTCCCAGAAGACTTTCCAG +
Preference number: 5 (lower is better)
Translates to: IPEQGIVIIGDDRSMHVIGPCML*SQKTFQ
Trigger: CTGGAAAGTCTTCTGGGACAATAACATGCATGGACC...AATAACATGCATGGACCTGTCATCTCCTATGATAACAATGCCTTGTTCTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681109.1
CDS-3UTR CAA 90 bp TTCATCACCTGTTCAATGAGTTCAGATTTCACCGGAGGCTTTGAATACTGGCCTTTAGTCATCTGTGTGTaGAAATCTTGTGTTGGATCT +
Preference number: 5 (lower is better)
Translates to: FITCSMSSDFTGGFEYWPLVICV*KSCVGS
Trigger: AGATCCAACACAAGATTTCAACACACAGATGACTAA...AGGCCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680031.1
ENST00000680436.1
ENST00000681051.1
CDS-3UTR CAA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGTTAGTCATCTGTGTGTaGAAATCTTGTGTTGGATCT +
Preference number: 5 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWLVICV*KSCVGS
Trigger: AGATCCAACACAAGATTTCAACACACAGATGACTAA...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp CATTCACTTAATTCTTCATTCAATCAGTTATTTGCTGATCACTCACCATGGGCCTGTAATGACCACTCATaGTGGATGTTCCCATGTGAC +
Preference number: 5 (lower is better)
Translates to: HSLNSSFNQLFADHSPWACNDHS*WMFPCD
Trigger: GTCACATGGGAACATCCACAATGAGTGGTCATTACA...GGCCCATGGTGAGTGATCAGCAAATAACTGATTGAATGAAGAATTAAGTGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679769.1
CDS-3UTR CAA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGTCCAAGATCACACTGTaGGTCACATCAGACAAGCAA +
Preference number: 5 (lower is better)
Translates to: KITDKFGALDMTPKSYHVSKITL*VTSDKQ
Trigger: TTGCTTGTCTGATGTGACCAACAGTGTGATCTTGGA...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp TTCACAACTCACTACATCCTAACCCAATGTCTGTGCTTTGTTTCACCTGGTTGGCAGACTGATAATGAGTaGACAAAATCCACACGTTAT +
Preference number: 5 (lower is better)
Translates to: FTTHYILTQCLCFVSPGWQTDNE*TKSTRY
Trigger: ATAACGTGTGGATTTTGTCAACTCATTATCAGTCTG...CCAACCAGGTGAAACAAAGCACAGACATTGGGTTAGGATGTAGTGAGTTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGTTTGTCAGCACTTATTaGGGGATCACAGCTCTAGCT +
Preference number: 5 (lower is better)
Translates to: KITDKFGALDMTPKSYHVFVSTY*GITALA
Trigger: AGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAA...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp TTGCAGAGGCTCTATTATGGACAGAGCATAATATCTACATGGATACATCAGAAATTTGTCAGCACTTATTaGGGGATCACAGCTCTAGCT +
Preference number: 5 (lower is better)
Translates to: LQRLYYGQSIISTWIHQKFVSTY*GITALA
Trigger: AGCTAGAGCTGTGATCCCCAAATAAGTGCTGACAAA...TTTCTGATGTATCCATGTAGATATTATGCTCTGTCCATAATAGAGCCTCTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGATCCACATGTCTAATTaGAAGTTCTTTAGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: KITDKFGALDMTPKSYHVIHMSN*KFFRGH
Trigger: GTGGCCCCTAAAGAACTTCAAATTAGACATGTGGAT...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp TTGCAGAGGCTCTATTATGGACAGAGCATAATATCTACATGGATACATCAGAAACAACACAGTCTCGATTaGAACAAGCCAAACTTTGAG +
Preference number: 5 (lower is better)
Translates to: LQRLYYGQSIISTWIHQKQHSLD*NKPNFE
Trigger: CTCAAAGTTTGGCTTGTTCAAATCGAGACTGTGTTG...TTTCTGATGTATCCATGTAGATATTATGCTCTGTCCATAATAGAGCCTCTGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp ATTCACTTAATTCTTCATTCAATCAGTTATTTGCTGATCACTCACCATGGGCCACATTCAATCAGTTATTaGCTGATCACTCACCATGGG +
Preference number: 5 (lower is better)
Translates to: IHLILHSISYLLITHHGPHSISY*LITHHG
Trigger: CCCATGGTGAGTGATCAGCAAATAACTGATTGAATG...TGGCCCATGGTGAGTGATCAGCAAATAACTGATTGAATGAAGAATTAAGTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679769.1
CDS-3UTR CAA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGCAGACTGATAATGAGTaGACAAAATCCACACGTTAT +
Preference number: 5 (lower is better)
Translates to: KITDKFGALDMTPKSYHVQTDNE*TKSTRY
Trigger: ATAACGTGTGGATTTTGTCAACTCATTATCAGTCTG...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp AAAATCACAGACAAATTTGGGGCACTTGACATGACTCCAAAGAGTTATCATGTGAAAATCTGGTGTGTATaGTATGTGTACAACACAGTC +
Preference number: 5 (lower is better)
Translates to: KITDKFGALDMTPKSYHVKIWCV*YVYNTV
Trigger: GACTGTGTTGTACACATACAATACACACCAGATTTT...CACATGATAACTCTTTGGAGTCATGTCAAGTGCCCCAAATTTGTCTGTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS-3UTR CAA 90 bp TTGCAGAGGCTCTATTATGGACAGAGCATAATATCTACATGGATACATCAGAAACTTTGTTTCACCTGGTaGGTTCTGTTTATTTTCCTA +
Preference number: 5 (lower is better)
Translates to: LQRLYYGQSIISTWIHQKLCFTW*VLFIFL
Trigger: TAGGAAAATAAACAGAACCAACCAGGTGAAACAAAG...TTTCTGATGTATCCATGTAGATATTATGCTCTGTCCATAATAGAGCCTCTGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263966.8
ENST00000680587.1
CDS CCA 72 bp CTGTCGCCGGACCTGGGCACGCGGATCGTGGGCATGTaGGGCACTAGCAGCTCGCCGATGTCTCCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: LSPDLGTRIVGM*GTSSSPMSPAA
Trigger: GGCTGCAGGAGACATCGGCGAGCTGCTAGTGCCCCACATGCCCACGATCCGCGTGCCCAGGTCCGGCGACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263966.8
ENST00000482333.5
ENST00000679350.1
ENST00000679749.1
ENST00000680008.1
ENST00000680587.1
ENST00000681051.1
ENST00000681064.1
ENST00000681358.1
CDS CCA 72 bp TGTAGACCCTGTCGCCGGACCTGGGCACGCGGATCGTaGGCATGTGGGGCACTAGCAGCTCGCCGATGTCTC +
Preference number: 6 (lower is better)
Translates to: CRPCRRTWARGS*ACGALAARRCL
Trigger: GAGACATCGGCGAGCTGCTAGTGCCCCACATGCCCACGATCCGCGTGCCCAGGTCCGGCGACAGGGTCTACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263966.8
ENST00000482333.5
ENST00000679350.1
ENST00000679749.1
ENST00000680008.1
ENST00000680587.1
ENST00000681051.1
ENST00000681064.1
ENST00000681358.1
CDS GCA 72 bp CCTAGATGGGGCAGGGAGGTGCCGCGTGCCCTGGTCTaGATGGAAGGCACTTACGCTCTCTGGAATTCTGGG +
Preference number: 6 (lower is better)
Translates to: PRWGREVPRALV*MEGTYALWNSG
Trigger: CCCAGAATTCCAGAGAGCGTAAGTGCCTTCCATGCAGACCAGGGCACGCGGCACCTCCCTGCCCCATCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS CCA 72 bp GATGGGGCAGGGAGGTGCCGCGTGCCCTGGTCTGCATaGAAGGCACTTACGCTCTCTGGAATTCTGGGATGC +
Preference number: 6 (lower is better)
Translates to: DGAGRCRVPWSA*KALTLSGILGC
Trigger: GCATCCCAGAATTCCAGAGAGCGTAAGTGCCTTCCATGCAGACCAGGGCACGCGGCACCTCCCTGCCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS CCA 72 bp CTGGACCTAGATGGGGCAGGGAGGTGCCGCGTGCCCTaGTCTGCATGGAAGGCACTTACGCTCTCTGGAATT +
Preference number: 6 (lower is better)
Translates to: LDLDGAGRCRVP*SAWKALTLSGI
Trigger: AATTCCAGAGAGCGTAAGTGCCTTCCATGCAGACCAGGGCACGCGGCACCTCCCTGCCCCATCTAGGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680605.1
CDS TCA 72 bp GTCCTGGAGCCCATTCTCTGTCTGCCCCGTCAGGAGTaGTGGTTCCCAGTTTCACGGCTAGTGGGTAGCCCA +
Preference number: 6 (lower is better)
Translates to: VLEPILCLPRQE*WFPVSRLVGSP
Trigger: TGGGCTACCCACTAGCCGTGAAACTGGGAACCATCACTCCTGACGGGGCAGACAGAGAATGGGCTCCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680651.1
CDS CAA 90 bp TTCGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTaGATGTCATTGTCCTGGAGCCCATTCTCTGTCTGCCCCGTCAGG +
Preference number: 6 (lower is better)
Translates to: FVPDSWITSHSLTLS*MSLSWSPFSVCPVR
Trigger: CCTGACGGGGCAGACAGAGAATGGGCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680651.1
CDS TCA 72 bp AAGACTTTCCAGTGGGACAACCTGCCCCGTCAGGAGTaGTGGTTCCCAGTTTCACGGCTAGTGGGTAGCCCA +
Preference number: 6 (lower is better)
Translates to: KTFQWDNLPRQE*WFPVSRLVGSP
Trigger: TGGGCTACCCACTAGCCGTGAAACTGGGAACCATCACTCCTGACGGGGCAGGTTGTCCCACTGGAAAGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680502.1
CDS TCA 72 bp CTGGGAAGGTTTCCTACATACCTGCCCCGTCAGGAGTaGTGGTTCCCAGTTTCACGGCTAGTGGGTAGCCCA +
Preference number: 6 (lower is better)
Translates to: LGRFPTYLPRQE*WFPVSRLVGSP
Trigger: TGGGCTACCCACTAGCCGTGAAACTGGGAACCATCACTCCTGACGGGGCAGGTATGTAGGAAACCTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680436.1
CDS CAA 90 bp TTCGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTaGATGTCATTGTCCTGGAGCCCATTCTCTGTCTCACCCCATGCA +
Preference number: 6 (lower is better)
Translates to: FVPDSWITSHSLTLS*MSLSWSPFSVSPHA
Trigger: TGCATGGGGTGAGACAGAGAATGGGCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681649.1
CDS GCA 72 bp CGACATGCTTCCAGCGGGAAACCCATCTCGGCCAGCTaGATCACTGATGACTCATCGATGTCTGATGGGTCT +
Preference number: 6 (lower is better)
Translates to: RHASSGKPISAS*ITDDSSMSDGS
Trigger: AGACCCATCAGACATCGATGAGTCATCAGTGATGCAGCTGGCCGAGATGGGTTTCCCGCTGGAAGCATGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263966.8
ENST00000496897.5
ENST00000679893.1
ENST00000679972.1
ENST00000680008.1
ENST00000680587.1
CDS GCA 72 bp CGACATGCTTCCAGCGGGAAACCCATCTCGGCCAGCTaGATCACTGATGACTCATCGATGTCTGATGCAGGT +
Preference number: 6 (lower is better)
Translates to: RHASSGKPISAS*ITDDSSMSDAG
Trigger: ACCTGCATCAGACATCGATGAGTCATCAGTGATGCAGCTGGCCGAGATGGGTTTCCCGCTGGAAGCATGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681724.1
CDS CCA 72 bp GCAATCGCTCTTACCCCTTGTTGGTTGCCGCCTCCATaGCCACAGGTAACTGCATCAGGTAATCCACCCTCT +
Preference number: 6 (lower is better)
Translates to: AIALTPCWLPPP*PQVTASGNPPS
Trigger: AGAGGGTGGATTACCTGATGCAGTTACCTGTGGCCATGGAGGCGGCAACCAACAAGGGGTAAGAGCGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681560.1
CDS TCA 72 bp CCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATGGTTaGTATCAAGTAGGTCAACTCAGGAAGGGGTCTTCT +
Preference number: 6 (lower is better)
Translates to: PLLAVTPWLGDG*YQVGQLRKGSS
Trigger: AGAAGACCCCTTCCTGAGTTGACCTACTTGATATCAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482333.5
CDS GCA 72 bp CGACATGCTTCCAGCGGGAAACCCATCTCGGCCAGCTaGATCACTGATGACTCATCGATGTCTGATGTTCAC +
Preference number: 6 (lower is better)
Translates to: RHASSGKPISAS*ITDDSSMSDVH
Trigger: GTGAACATCAGACATCGATGAGTCATCAGTGATGCAGCTGGCCGAGATGGGTTTCCCGCTGGAAGCATGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679768.1
CDS GCA 72 bp CGACATGCTTCCAGCGGGAAACCCATCTCGGCCAGCTaGATCACTGATGACTCATCGATGTCTGATGCTGTA +
Preference number: 6 (lower is better)
Translates to: RHASSGKPISAS*ITDDSSMSDAV
Trigger: TACAGCATCAGACATCGATGAGTCATCAGTGATGCAGCTGGCCGAGATGGGTTTCCCGCTGGAAGCATGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680856.1
CDS GCA 72 bp CGACATGCTTCCAGCGGGAAACCCATCTCGGCCAGCTaGATCACTGATGACTCATCGATGTCTGATGCTACA +
Preference number: 6 (lower is better)
Translates to: RHASSGKPISAS*ITDDSSMSDAT
Trigger: TGTAGCATCAGACATCGATGAGTCATCAGTGATGCAGCTGGCCGAGATGGGTTTCCCGCTGGAAGCATGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679752.1
CDS GCA 72 bp AACAATGTGCCACCACTGATGGTCCACTGTGATGGCTaGCTGGTAACGCCAAGAACCCTTCCAGATCCATCC +
Preference number: 6 (lower is better)
Translates to: NNVPPLMVHCDG*LVTPRTLPDPS
Trigger: GGATGGATCTGGAAGGGTTCTTGGCGTTACCAGGCAGCCATCACAGTGGACCATCAGTGGTGGCACATTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679407.1
CDS CCA 72 bp TCTTCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATaGTTGATATCAAGTAGGTCAACTCAGGAAGGGGTC +
Preference number: 6 (lower is better)
Translates to: SSSPGCNPLARR*LISSRSTQEGV
Trigger: GACCCCTTCCTGAGTTGACCTACTTGATATCAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482333.5
CDS CCA 72 bp AGGCTCCAGCAGAAGCTGCCCCTCCATAACCAGGCATaGTCAGCGGCTCAGCAAAATGGTCTATCAATTGGT +
Preference number: 6 (lower is better)
Translates to: RLQQKLPLHNQA*SAAQQNGLSIG
Trigger: ACCAATTGATAGACCATTTTGCTGAGCCGCTGACCATGCCTGGTTATGGAGGGGCAGCTTCTGCTGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680477.1
CDS CAA 72 bp TCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATGGTaGATATCAAGTAGGTCAACTCAGGAAGGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: SSPGCNPLARRW*ISSRSTQEGVF
Trigger: GAAGACCCCTTCCTGAGTTGACCTACTTGATATCAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482333.5
CDS CAA 72 bp GACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTaGATGTCATTGTCCTGGAGCCCATTCTCTGTCTGC +
Preference number: 6 (lower is better)
Translates to: DSWITSHSLTLS*MSLSWSPFSVC
Trigger: GCAGACAGAGAATGGGCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680651.1
CDS CAA 72 bp GACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTaGATGTCATTGTCCTGGAGCCCATTCTCCCATGCA +
Preference number: 6 (lower is better)
Translates to: DSWITSHSLTLS*MSLSWSPFSHA
Trigger: TGCATGGGAGAATGGGCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680307.1
CDS CAA 90 bp TTCGTGCCCGACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTaGATGTCATTGTCCTGGAGCCCATTCTCCCATGCATATGAAGCA +
Preference number: 6 (lower is better)
Translates to: FVPDSWITSHSLTLS*MSLSWSPFSHAYEA
Trigger: TGCTTCATATGCATGGGAGAATGGGCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680307.1
CDS TCA 72 bp CTAAGTTTGTCCAAGTATACTCTGCCCCGTCAGGAGTaGTGGTTCCCAGTTTCACGGCTAGTGGGTAGCCCA +
Preference number: 6 (lower is better)
Translates to: LSLSKYTLPRQE*WFPVSRLVGSP
Trigger: TGGGCTACCCACTAGCCGTGAAACTGGGAACCATCACTCCTGACGGGGCAGAGTATACTTGGACAAACTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680055.1
ENST00000681109.1
ENST00000681356.1
CDS CCA 72 bp AAGCGATCAGTTCATCCTTGTTGGTTGCCGCCTCCATaGCCACAGGTAACTGCATCAGGTAATCCACCCTCT +
Preference number: 6 (lower is better)
Translates to: KRSVHPCWLPPP*PQVTASGNPPS
Trigger: AGAGGGTGGATTACCTGATGCAGTTACCTGTGGCCATGGAGGCGGCAACCAACAAGGATGAACTGATCGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263966.8
ENST00000482333.5
ENST00000496897.5
ENST00000497155.1
ENST00000679972.1
ENST00000680008.1
ENST00000680587.1
ENST00000680853.1
CDS CAA 72 bp GACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTaGATGTCATTGTCCTGGAGCCCATTCTCTGTCTCA +
Preference number: 6 (lower is better)
Translates to: DSWITSHSLTLS*MSLSWSPFSVS
Trigger: TGAGACAGAGAATGGGCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681649.1
CDS CAA 90 bp GACTCCTGGATCACTTCCCACTCACTGACCCTCAGCTTGATGTCATaGTCCTGGAGCCCATTCTCTGTCTCACCCCATGCATATGAAGCA +
Preference number: 6 (lower is better)
Translates to: DSWITSHSLTLSLMS*SWSPFSVSPHAYEA
Trigger: TGCTTCATATGCATGGGGTGAGACAGAGAATGGGCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681649.1
CDS GCA 72 bp GAGAGGCTTTCAAGATCTTCCTTTCCCTCGAGTTCTTaGAGGTCTGGGTCTGCTTCTGCAGTCAGTCTGTTG +
Preference number: 6 (lower is better)
Translates to: ERLSRSSFPSSS*RSGSASAVSLL
Trigger: CAACAGACTGACTGCAGAAGCAGACCCAGACCTGCAAGAACTCGAGGGAAAGGAAGATCTTGAAAGCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS GCA 72 bp AACAATGTGCCACCACTGATGGTCCACTGTGATGGCTaGCTGGTAACGCCAAGAACCCCTTCCTTCCTTTTT +
Preference number: 6 (lower is better)
Translates to: NNVPPLMVHCDG*LVTPRTPSFLF
Trigger: AAAAAGGAAGGAAGGGGTTCTTGGCGTTACCAGGCAGCCATCACAGTGGACCATCAGTGGTGGCACATTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680549.1
CDS CAA 72 bp TATTCGCAGTGGGAACAGTATGTCCCAGGCTACCCATaGTCCTACCAGGTTGCATGTGAAGATCATGGCAGG +
Preference number: 6 (lower is better)
Translates to: YSQWEQYVPGYP*SYQVACEDHGR
Trigger: CCTGCCATGATCTTCACATGCAACCTGGTAGGACAATGGGTAGCCTGGGACATACTGTTCCCACTGCGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679752.1
CDS CAA 90 bp CCCTCGAGTTCTTGCAGGTCTGGGTCTGCTTCTGCAGTCAGTCTGTaGCGATATCATGCACCATGTAGTCTCTGGAAAATTCCATTCCAG +
Preference number: 6 (lower is better)
Translates to: PSSSCRSGSASAVSL*RYHAPCSLWKIPFQ
Trigger: CTGGAATGGAATTTTCCAGAGACTACATGGTGCATGATATCGCAACAGACTGACTGCAGAAGCAGACCCAGACCTGCAAGAACTCGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS TCA 72 bp ACACCGCCTTGTGCTCCTCCTTCATCACCTGTTCAATaGGTTCAGATTTCACCGGAGGCTTTGAATACTGGC +
Preference number: 6 (lower is better)
Translates to: TPPCAPPSSPVQ*VQISPEALNTG
Trigger: GCCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGAGGAGCACAAGGCGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681836.1
CDS GCA 72 bp TCAGTTCATCTGGGTGAAAGAGCAAATCAAAGACCTTaGAATCGCTCTTACCCCTTGTTGGTTGCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: SVHLGERANQRP*NRSYPLLVAAS
Trigger: GGAGGCGGCAACCAACAAGGGGTAAGAGCGATTGCAAGGTCTTTGATTTGCTCTTTCACCCAGATGAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681560.1
CDS CAA 72 bp ATCACTTCCCACTCACTGACCCTCAGCTTGATGTCATaGTCCTGGAGCCCATTCTCCCATGCATATGAAGCA +
Preference number: 6 (lower is better)
Translates to: ITSHSLTLSLMS*SWSPFSHAYEA
Trigger: TGCTTCATATGCATGGGAGAATGGGCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGAGTGGGAAGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680307.1
CDS CAA 90 bp CACCTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGTaGGCATATTTAGATACTGGCAATTCATTTTCCCACGTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: HLGGILTPLSSWVRL*AYLDTGNSFSHVSG
Trigger: CCCAGACACGTGGGAAAATGAATTGCCAGTATCTAAATATGCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681299.1
CDS CAA 90 bp CAATTAGATTATTCGCAGTGGGAACAGTATGTCCCAGGCTACCCATaGTCCTACCAGGTTGCATGTGAAGATCATGGCAGGCTGACCCTT +
Preference number: 6 (lower is better)
Translates to: QLDYSQWEQYVPGYP*SYQVACEDHGRLTL
Trigger: AAGGGTCAGCCTGCCATGATCTTCACATGCAACCTGGTAGGACAATGGGTAGCCTGGGACATACTGTTCCCACTGCGAATAATCTAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679752.1
CDS TCA 72 bp CCACGTGTCTGGGTCCTGCTTTCTGTATGGAGATTTTaGGCTGAGAACTGCATCACAAGCAATTGTTACGGG +
Preference number: 6 (lower is better)
Translates to: PRVWVLLSVWRF*AENCITSNCYG
Trigger: CCCGTAACAATTGCTTGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGAAAGCAGGACCCAGACACGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681064.1
CDS TCA 72 bp GGTTCCTCTTGTGCTCCTCCTTCATCACCTGTTCAATaGGTTCAGATTTCACCGGAGGCTTTGAATACTGGC +
Preference number: 6 (lower is better)
Translates to: GSSCAPPSSPVQ*VQISPEALNTG
Trigger: GCCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGAGGAGCACAAGAGGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680217.1
CDS TCA 72 bp TTGCTGCCTTGTGCTCCTCCTTCATCACCTGTTCAATaGGTTCAGATTTCACCGGAGGCTTTGAATACTGGC +
Preference number: 6 (lower is better)
Translates to: LLPCAPPSSPVQ*VQISPEALNTG
Trigger: GCCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGAGGAGCACAAGGCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680853.1
CDS CCA 72 bp TCCCACTCACTGACCCTCAGCTTGATGTCATTGTCCTaGAGCCCATTCTCCCATGCATATGAAGCATATCAA +
Preference number: 6 (lower is better)
Translates to: SHSLTLSLMSLS*SPFSHAYEAYQ
Trigger: TTGATATGCTTCATATGCATGGGAGAATGGGCTCCAGGACAATGACATCAAGCTGAGGGTCAGTGAGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680307.1
CDS CCA 72 bp CCTCACAGAAAGTTACTGCAGGCCTATAGATACATCTaGCAATCACAGGAAGCAAGCAGCTCTGGAAAACGG +
Preference number: 6 (lower is better)
Translates to: PHRKLLQAYRYI*QSQEASSSGKR
Trigger: CCGTTTTCCAGAGCTGCTTGCTTCCTGTGATTGCCAGATGTATCTATAGGCCTGCAGTAACTTTCTGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679752.1
CDS CAA 90 bp CATCTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGTaGGCATATTTAGATACTGGCAATTCATTTTCCCACGTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: HLGGILTPLSSWVRL*AYLDTGNSFSHVSG
Trigger: CCCAGACACGTGGGAAAATGAATTGCCAGTATCTAAATATGCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679783.1
ENST00000680276.1
CDS CAA 90 bp TACCTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTTGTaGGCATATTTAGATACTGGCAATTCATTTTCCCACGTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: YLGGILTPLSSWVRL*AYLDTGNSFSHVSG
Trigger: CCCAGACACGTGGGAAAATGAATTGCCAGTATCTAAATATGCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679694.1
CDS CAA 90 bp CAGCACCTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTaGTTGGCATATTTAGATACTGGCAATTCATTTTCCCACGTGTCT +
Preference number: 6 (lower is better)
Translates to: QHLGGILTPLSSWVR*LAYLDTGNSFSHVS
Trigger: AGACACGTGGGAAAATGAATTGCCAGTATCTAAATATGCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681299.1
CDS CAA 90 bp GGAAGTTCTTCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATGGTaGATATCAAGTAGGTCTGGCATATCAATAGAAACATTTCACACC +
Preference number: 6 (lower is better)
Translates to: GSSSSPGCNPLARRW*ISSRSGISIETFHT
Trigger: GGTGTGAAATGTTTCTATTGATATGCCAGACCTACTTGATATCAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGAAGAACTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680167.1
CDS CAA 90 bp GGAAGTTCTTCCTCTCCTGGCTGTAACCCCCTGGCTCGGAGATGGTaGATATCAAGTAGGTCTGGCATATCAATAGAAACATCCTTGTTG +
Preference number: 6 (lower is better)
Translates to: GSSSSPGCNPLARRW*ISSRSGISIETSLL
Trigger: CAACAAGGATGTTTCTATTGATATGCCAGACCTACTTGATATCAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGAAGAACTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680951.1
CDS CAA 90 bp CCAAGAACCCTTCCAGATCCATCCTTGACTCTAGGTCCTTCGGGCTaGGCCTCAGAAATAATGTTTGCATTGGCATTATTCTCCATCTCA +
Preference number: 6 (lower is better)
Translates to: PRTLPDPSLTLGPSG*ASEIMFALALFSIS
Trigger: TGAGATGGAGAATAATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAAGGATGGATCTGGAAGGGTTCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679407.1
CDS TCA 72 bp GTCCTGGAGCCCATTCTCTGTCTCACCCCATGCATATaGAGCATATCAATTCCAAAATGCGCTAAGTGCTTG +
Preference number: 6 (lower is better)
Translates to: VLEPILCLTPCI*SISIPKCAKCL
Trigger: CAAGCACTTAGCGCATTTTGGAATTGATATGCTTCATATGCATGGGGTGAGACAGAGAATGGGCTCCAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681649.1
CDS TCA 72 bp CCACGTGTCTGGGTCCTGCTTTCTGTATGGAGATTTTaGGCTGAGAACTGCATCACAAGCAATTGTTACCTG +
Preference number: 6 (lower is better)
Translates to: PRVWVLLSVWRF*AENCITSNCYL
Trigger: CAGGTAACAATTGCTTGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGAAAGCAGGACCCAGACACGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681128.1
CDS TCA 72 bp CCACGTGTCTGGGTCCTGCTTTCTGTATGGAGATTTTaGGCTGAGAACTGCATCACAAGCAATTGTTACCTC +
Preference number: 6 (lower is better)
Translates to: PRVWVLLSVWRF*AENCITSNCYL
Trigger: GAGGTAACAATTGCTTGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGAAAGCAGGACCCAGACACGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681642.1
CDS TCA 72 bp TGTCCTACCAGGTTGCATGTGAAGATCATGGCAGGCTaGCCCTTGCTGACTCTAATTACTCCTCTAACAATC +
Preference number: 6 (lower is better)
Translates to: CPTRLHVKIMAG*PLLTLITPLTI
Trigger: GATTGTTAGAGGAGTAATTAGAGTCAGCAAGGGTCAGCCTGCCATGATCTTCACATGCAACCTGGTAGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679752.1
CDS GCA 72 bp ACAAAGGCCTTAAACATGCGCGGAGAGATCCCGTTCTaGTGTGGCATAAACTCCACTTTCCAGATGAGAAAA +
Preference number: 6 (lower is better)
Translates to: TKALNMRGEIPF*CGINSTFQMRK
Trigger: TTTTCTCATCTGGAAAGTGGAGTTTATGCCACAGCAGAACGGGATCTCTCCGCGCATGTTTAAGGCCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681782.1
CDS CCA 72 bp TTCAAGATCTTCCTTTCCCTCGAGTTCTTGCAGGTCTaGGTCTATGAGAGAAAACTGCTTCTGCAGTCAGTC +
Preference number: 6 (lower is better)
Translates to: FKIFLSLEFLQV*VYERKLLLQSV
Trigger: GACTGACTGCAGAAGCAGTTTTCTCTCATAGACCCAGACCTGCAAGAACTCGAGGGAAAGGAAGATCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602704.2
CDS CCA 72 bp CTTGTGTTGGATCTAAAGGCGAGTAGTCAAATATTCTaGGAAGGTTTCCTACATACCTGCCCCGTCAGGAGT +
Preference number: 6 (lower is better)
Translates to: LVLDLKASSQIF*EGFLHTCPVRS
Trigger: ACTCCTGACGGGGCAGGTATGTAGGAAACCTTCCCAGAATATTTGACTACTCGCCTTTAGATCCAACACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680436.1
CDS CAA 72 bp CAATTGGTTCATCAGGCGATTTCACACCCGCAGACTTaGCTTGTAGGGCACTGCTCCAGAAATCATCAACAT +
Preference number: 6 (lower is better)
Translates to: QLVHQAISHPQT*LVGHCSRNHQH
Trigger: ATGTTGATGATTTCTGGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGAAATCGCCTGATGAACCAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679893.1
CDS CAA 90 bp ACATACCTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTaGTTGGCATATTTAGATACTGGCAATTCATTTTCCCACGTGTCT +
Preference number: 6 (lower is better)
Translates to: TYLGGILTPLSSWVR*LAYLDTGNSFSHVS
Trigger: AGACACGTGGGAAAATGAATTGCCAGTATCTAAATATGCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679694.1
CDS TCA 72 bp TGTCTGGGTCCTGCTTTCTGTATGGAGATTTTGAGCTaGGAACTGCATCACAAGCAATTGTTACGGGAGAGT +
Preference number: 6 (lower is better)
Translates to: CLGPAFCMEILS*ELHHKQLLRES
Trigger: ACTCTCCCGTAACAATTGCTTGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGAAAGCAGGACCCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681064.1
CDS TCA 72 bp TGTCTGGGTCCTGCTTTCTGTATGGAGATTTTGAGCTaGGAACTGCATCACAAGCAATTGTTACCTCTCGCA +
Preference number: 6 (lower is better)
Translates to: CLGPAFCMEILS*ELHHKQLLPLA
Trigger: TGCGAGAGGTAACAATTGCTTGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGAAAGCAGGACCCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681642.1
CDS CAA 72 bp AGGTTTCCTACATACCTTGGAGGAATCCTGACTCCATaGTCCAGCTGGGTGAGGTTGTTGGCATATTTAGAT +
Preference number: 6 (lower is better)
Translates to: RFPTYLGGILTP*SSWVRLLAYLD
Trigger: ATCTAAATATGCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGGTATGTAGGAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679694.1
CDS CAA 72 bp CTTCCAGATCCATCCTTGACTCTAGGTCCTTCGGGCTaGGCCTCAGAAATAATGTTTGCATTGGCATTATTC +
Preference number: 6 (lower is better)
Translates to: LPDPSLTLGPSG*ASEIMFALALF
Trigger: GAATAATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAAGGATGGATCTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679407.1
CDS CAA 90 bp AAACATCTTGGAGGAATCCTGACTCCATTGTCCAGCTGGGTGAGGTaGTTGGCATATTTAGATACTGGCAATTCATTTTCCCACGTGTCT +
Preference number: 6 (lower is better)
Translates to: KHLGGILTPLSSWVR*LAYLDTGNSFSHVS
Trigger: AGACACGTGGGAAAATGAATTGCCAGTATCTAAATATGCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679783.1
CDS CAA 90 bp AATCACCCATTTCCAGATCCATCCTTGACTCTAGGTCCTTCGGGCTaGGCCTCAGAAATAATGTTTGCATTGGCATTATTCTCCATCTCA +
Preference number: 6 (lower is better)
Translates to: NHPFPDPSLTLGPSG*ASEIMFALALFSIS
Trigger: TGAGATGGAGAATAATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAAGGATGGATCTGGAAATGGGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679839.1
CDS CAA 90 bp CATTTTCAGGTTCCAGATCCATCCTTGACTCTAGGTCCTTCGGGCTaGGCCTCAGAAATAATGTTTGCATTGGCATTATTCTCCATCTCA +
Preference number: 6 (lower is better)
Translates to: HFQVPDPSLTLGPSG*ASEIMFALALFSIS
Trigger: TGAGATGGAGAATAATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAAGGATGGATCTGGAACCTGAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681262.1
CDS TCA 72 bp TGTCTGGGTCCTGCTTTCTGTATGGAGATTTTGAGCTaGGAACTGCATCACAAGCAATTGTTACCTGACACA +
Preference number: 6 (lower is better)
Translates to: CLGPAFCMEILS*ELHHKQLLPDT
Trigger: TGTGTCAGGTAACAATTGCTTGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGAAAGCAGGACCCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681128.1
CDS TCA 72 bp GAACTTCTTTATCTGCACTACCAAGTATTCAGGGAATaGAGCAAAGCGAGATGTTCAACTCAGGAAGGGGTC +
Preference number: 6 (lower is better)
Translates to: ELLYLHYQVFRE*SKARCSTQEGV
Trigger: GACCCCTTCCTGAGTTGAACATCTCGCTTTGCTTCATTCCCTGAATACTTGGTAGTGCAGATAAAGAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679954.1
CDS TCA 72 bp AAGACCTCTATGACAGCCTCTCCTATGACTGAAACTTaGACAGAAAGCTCTATCTACAGGCCTAAAAGCCTG +
Preference number: 6 (lower is better)
Translates to: KTSMTASPMTET*TESSIYRPKSL
Trigger: CAGGCTTTTAGGCCTGTAGATAGAGCTTTCTGTTCAAGTTTCAGTCATAGGAGAGGCTGTCATAGAGGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679752.1
CDS TCA 72 bp AGCAAACCAAGATCTAGGGAACAAGAGAAAGATCTGTaGCATGACATCCAGCAGATAAAGTCCAAGGCAGGA +
Preference number: 6 (lower is better)
Translates to: SKPRSREQEKDL*HDIQQIKSKAG
Trigger: TCCTGCCTTGGACTTTATCTGCTGGATGTCATGTCACAGATCTTTCTCTTGTTCCCTAGATCTTGGTTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679407.1
CDS GCA 72 bp GTAACTCTCGTTTCCAAAGACCACACAGAAGGTGAATaGCATGCAACTGTCAGGATTCAACCAAATCAGACA +
Preference number: 6 (lower is better)
Translates to: VTLVSKDHTEGE*HATVRIQPNQT
Trigger: TGTCTGATTTGGTTGAATCCTGACAGTTGCATGGCATTCACCTTCTGTGTGGTCTTTGGAAACGAGAGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681299.1
CDS CAA 72 bp ATTCCAGATCCATCCTTGACTCTAGGTCCTTCGGGCTaGGCCTCAGAAATAATGTTTGCATTGGCATTATTC +
Preference number: 6 (lower is better)
Translates to: IPDPSLTLGPSG*ASEIMFALALF
Trigger: GAATAATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAAGGATGGATCTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679769.1
ENST00000680008.1
CDS CAA 72 bp TTTCCAGATCCATCCTTGACTCTAGGTCCTTCGGGCTaGGCCTCAGAAATAATGTTTGCATTGGCATTATTC +
Preference number: 6 (lower is better)
Translates to: FPDPSLTLGPSG*ASEIMFALALF
Trigger: GAATAATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAAGGATGGATCTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679839.1
CDS CAA 90 bp GAAAATTCCATTCCAGATCCATCCTTGACTCTAGGTCCTTCGGGCTaGGCCTCAGAAATAATGTTTGCATTGGCATTATTCTCCATCTCA +
Preference number: 6 (lower is better)
Translates to: ENSIPDPSLTLGPSG*ASEIMFALALFSIS
Trigger: TGAGATGGAGAATAATGCCAATGCAAACATTATTTCTGAGGCCAAGCCCGAAGGACCTAGAGTCAAGGATGGATCTGGAATGGAATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680008.1
CDS GCA 72 bp TTCTTCAAACTCAGGGTGGCTAAAGATCCAATCCAGTaGTCTTTCCAGGTTATTATTCTGGCTCTTCCATGT +
Preference number: 6 (lower is better)
Translates to: FFKLRVAKDPIQ*SFQVIILALPC
Trigger: ACATGGAAGAGCCAGAATAATAACCTGGAAAGAGCACTGGATTGGATCTTTAGCCACCCTGAGTTTGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681362.1
CDS GCA 72 bp CTAAAAGCCTGTTCCTTAAACCTCACAGAAAGTTACTaGAGGCCTATAGATACATCTGGCAATCACAGGAAG +
Preference number: 6 (lower is better)
Translates to: LKACSLNLTESY*RPIDTSGNHRK
Trigger: CTTCCTGTGATTGCCAGATGTATCTATAGGCCTGCAGTAACTTTCTGTGAGGTTTAAGGAACAGGCTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679752.1
CDS CCA 72 bp CTTGTGTTGGATCTAAAGGCGAGTAGTCAAATATTCTaGGAAGGTTTCCTACATACCTGTAATCCCAGCACT +
Preference number: 6 (lower is better)
Translates to: LVLDLKASSQIF*EGFLHTCNPST
Trigger: AGTGCTGGGATTACAGGTATGTAGGAAACCTTCCCAGAATATTTGACTACTCGCCTTTAGATCCAACACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681533.1
CDS CAA 72 bp GTCTTCGGTCTCCAAAACTTCCTAGATCTAGGAAGTTaGATCCTCTATAAAATGTCACCTGCTTTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: VFGLQNFLDLGS*ILYKMSPALPF
Trigger: GAAGGGCAAAGCAGGTGACATTTTATAGAGGATCAAACTTCCTAGATCTAGGAAGTTTTGGAGACCGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679752.1
CDS CAA 72 bp TGGCATATCAATAGAAACATTTCACACCCGCAGACTTaGCTTGTAGGGCACTGCTCCAGAAATCATCAACAT +
Preference number: 6 (lower is better)
Translates to: WHINRNISHPQT*LVGHCSRNHQH
Trigger: ATGTTGATGATTTCTGGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGAAATGTTTCTATTGATATGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680167.1
CDS CCA 72 bp CTTGTGTTGGATCTAAAGGCGAGTAGTCAAATATTCTaGGAAGGTTTCCTACATACCAAAACATCATCAGGC +
Preference number: 6 (lower is better)
Translates to: LVLDLKASSQIF*EGFLHTKTSSG
Trigger: GCCTGATGATGTTTTGGTATGTAGGAAACCTTCCCAGAATATTTGACTACTCGCCTTTAGATCCAACACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679403.1
CDS CAA 72 bp GAAAAGAATAAACATCTTGGAGGAATCCTGACTCCATaGTCCAGCTGGGTGAGGTTGTTGGCATATTTAGAT +
Preference number: 6 (lower is better)
Translates to: EKNKHLGGILTP*SSWVRLLAYLD
Trigger: ATCTAAATATGCCAACAACCTCACCCAGCTGGACAATGGAGTCAGGATTCCTCCAAGATGTTTATTCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679783.1
CDS CAA 90 bp TTAAGCCACACAAATATTAAAGCTATTTGGGCTAAGTTTATATCTTaGACCCACATAGGAACCAGGTTAATTACCTGGACAATGCAAGCA +
Preference number: 6 (lower is better)
Translates to: LSHTNIKAIWAKFIS*THIGTRLITWTMQA
Trigger: TGCTTGCATTGTCCAGGTAATTAACCTGGTTCCTATGTGGGTCAAAGATATAAACTTAGCCCAAATAGCTTTAATATTTGTGTGGCTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679752.1