Pregenerated sensors for USP12 (Homo sapiens)

Ensembl gene IDs: ENSG00000152484

Ensembl transcript IDs: ENST00000282344.11, ENST00000612674.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR GCA 90 bp	ATGCTAAGAGAATGTACAACATCCTATGTAGGAAAAGCAGAAACTGGGGGTGTGATGGGCAATGGGGAGTaGTATCTCCCTCAACCCTCT	+
Preference number: 2 (lower is better) Translates to: MLRECTTSYVGKAETGGVMGNGE*YLPQPS Trigger: AGAGGGTTGAGGGAGATAGCACTCCCCATTGCCCAT...CACACCCCCAGTTTCTGCTTTTCCTACATAGGATGTTGTACATTCTCTTAGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000612674.1
3UTR-3UTR CCA 90 bp	AATAACATGCTAAGAGAATGTACAACATCCTATGTAGGAAAAGCAGAAACTGGGGTGGGGGATGGGCAATaGGGAGTGCTATCTCCCTCA	+
Preference number: 2 (lower is better) Translates to: NNMLRECTTSYVGKAETGVGDGQ*GVLSPS Trigger: TGAGGGAGATAGCACTCCCCATTGCCCATCCCCCAC...CCCAGTTTCTGCTTTTCCTACATAGGATGTTGTACATTCTCTTAGCATGTTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000612674.1
CDS-3UTR CCA 90 bp	CACACAGTTAAATTCACTGAAGAGCCAGGACATGAGCGCTTTAGCCTCCCAGCTAACCACCGAGCCCGCTaGGCCGCCGCTGCCGTCGTC	+
Preference number: 4 (lower is better) Translates to: HTVKFTEEPGHERFSLPANHRAR*AAAAVV Trigger: GACGACGGCAGCGGCGGCCCAGCGGGCTCGGTGGTT...AGCTGGGAGGCTAAAGCGCTCATGTCCTGGCTCTTCAGTGAATTTAACTGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282344.11
CDS-3UTR CCA 90 bp	GCTAAGAGAATGTACAACATCCTATGTAGGAAAAGCAGAAACTGGGGGTGTGGGGTGGGGGATGGGCAATaGGGAGTGCTATCTCCCTCA	+
Preference number: 4 (lower is better) Translates to: AKRMYNILCRKSRNWGCGVGDGQ*GVLSPS Trigger: TGAGGGAGATAGCACTCCCCATTGCCCATCCCCCAC...CCCACACCCCCAGTTTCTGCTTTTCCTACATAGGATGTTGTACATTCTCTTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000612674.1
CDS-3UTR TCA 90 bp	CACACAGTTAAATTCACTGAAGAGCCAGGACATGAGCGCTTTAGCCTCCCAGCTCCCACAACAACCCTGTaGGGTAGGTATTACTCCCAT	+
Preference number: 4 (lower is better) Translates to: HTVKFTEEPGHERFSLPAPTTTL*GRYYSH Trigger: ATGGGAGTAATACCTACCTCACAGGGTTGTTGTGGG...AGCTGGGAGGCTAAAGCGCTCATGTCCTGGCTCTTCAGTGAATTTAACTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282344.11
CDS-3UTR TCA 90 bp	CACACAGTTAAATTCACTGAAGAGCCAGGACATGAGCGCTTTAGCCTCCCAGCTACAAGACAGGGAGACTaGAGCACAGAGAGGTTAAGT	+
Preference number: 4 (lower is better) Translates to: HTVKFTEEPGHERFSLPATRQGD*STERLS Trigger: ACTTAACCTCTCTGTGCTTCAGTCTCCCTGTCTTGT...AGCTGGGAGGCTAAAGCGCTCATGTCCTGGCTCTTCAGTGAATTTAACTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282344.11
CDS-3UTR GCA 90 bp	AATAACATGCTAAGAGAATGTACAACATCCTATGTAGGAAAAGCAGAAACTGGGATGGGCAATGGGGAGTaGTATCTCCCTCAACCCTCT	+
Preference number: 4 (lower is better) Translates to: NNMLRECTTSYVGKAETGMGNGE*YLPQPS Trigger: AGAGGGTTGAGGGAGATAGCACTCCCCATTGCCCAT...CCCAGTTTCTGCTTTTCCTACATAGGATGTTGTACATTCTCTTAGCATGTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612674.1

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